Psyllid ID: psy13952

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-----
Protein Sequence
MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIDF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHEEEccccccccccHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccccHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHcccccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccEEEEEccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHcHHHHHHHHcccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEcccccHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHcccccccHHcccHHHHHHHHHHHHccEEEEEccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcc
Coil and Loop (DISEMBL)
MRRYYFNDEEVGYFltqkrtapasnpmtdpsmmTEMLKGNLTNVLPMIVIGGWINWMfsgfvttkvpfpltlrfKPMLQRGIEllsldpawvssaSWYFLNVFGLRSIYALVLgennaadqsrqfqdqmsgaavqmpvdpkaAFKAEWEALEIYQHQSALEGLAAEMievdmtdpsmmTEMLKGNLTNVLPMIVIGGWINWMfsgfvttkvpfpltlrfkpmlqrgkylTRSAFQMRRYYFNDEEVGYFltqkrtapasnpmtdpsmmTEMLKGNLTNVLPMIVIGGWINWMfsgfvttkvpfpltlrfkpmlqrgwinwmfsgfvttkvpfpltlrfkpmlqrdilgnatfsptgiellsldpawvssASWYFLNVFGLRSIYALVLgennaadqsrqfqdqmsgaavqmpvdpkaAFKAEWEALEIYQHQSALEGLAAEMIDF
Flexible Loop (DISEMBL)
mrryyfndeevgyfltqkrtapasnpMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFltqkrtapasnpmTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIDF
Low Complexity Region (SEG)
MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIDF
Disordered region (IsUnstruct)
***YYFNDEEVGYFLT********************LKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGE**************************AAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQ*******************LKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGE**************************AAFKAEWEALEIYQHQS************
Disordered Region (DISOPRED)
MRRYYFNDEEV**************************KGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLG*****************************FKAEWEALEIYQHQSALE*****************TEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKV*********PMLQRGKYLTRSAFQMRRYYFNDE**************************MLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLG*****************************FKAEWEALEIYQHQSALEGLAAEMIDF
Disordered Region (DISEMBL)
MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIDF
Disordered Region (DISPRO)
*RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIDF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIDF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	445	2.2.26 [Sep-21-2011]
Q7SXW4	261	ER membrane protein compl	no	N/A	0.319	0.544	0.664	4e-68
Q5R7C1	261	ER membrane protein compl	yes	N/A	0.325	0.555	0.637	5e-66
Q9P0I2	261	ER membrane protein compl	yes	N/A	0.325	0.555	0.637	5e-66
Q5U2V8	261	ER membrane protein compl	yes	N/A	0.325	0.555	0.637	6e-66
Q99KI3	261	ER membrane protein compl	yes	N/A	0.325	0.555	0.637	6e-66
Q3ZCB8	261	ER membrane protein compl	yes	N/A	0.325	0.555	0.632	2e-65
Q9P787	258	ER membrane protein compl	yes	N/A	0.310	0.534	0.439	7e-26
Q54YN3	314	ER membrane protein compl	yes	N/A	0.337	0.477	0.393	4e-25
P36039	253	ER membrane protein compl	yes	N/A	0.321	0.565	0.389	4e-20
A7A082	253	ER membrane protein compl	N/A	N/A	0.321	0.565	0.389	4e-20

>sp|Q7SXW4|EMC3_DANRE ER membrane protein complex subunit 3 OS=Danio rerio GN=emc3 PE=2 SV=1

 Score =  259 bits (661), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 149/182 (81%)

Query: 1   MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSG 60
           MR++YFN++E G+F   KR     +PMTDPSM+T+M+KGN+TNVLPMI+IGGWINW FSG
Sbjct: 75  MRKFYFNNQEDGFFKKTKRKVVPPSPMTDPSMLTDMMKGNVTNVLPMILIGGWINWTFSG 134

Query: 61  FVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAAD 120
           FVTTKVPFPLTLRFKPMLQ+GIELLSLD +WVSSASWYFLNVFGLRS+Y+L+LG++N AD
Sbjct: 135 FVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFGLRSMYSLILGQDNGAD 194

Query: 121 QSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTE 180
           QSR  Q+QMSGAA+ MP D   AFKAEWEALE+  HQ ALE +  +++  D+    M ++
Sbjct: 195 QSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVEEDLMSKDLDLSGMFSK 254

Query: 181 ML 182
            L
Sbjct: 255 DL 256

Danio rerio (taxid: 7955)

>sp|Q5R7C1|EMC3_PONAB ER membrane protein complex subunit 3 OS=Pongo abelii GN=EMC3 PE=2 SV=3

 Score =  252 bits (643), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 118/185 (63%), Positives = 148/185 (80%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct: 76  RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct: 136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
           SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct: 196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMAKDLHFEGMFKKE 255

Query: 182 LKGNL 186
           L+ ++
Sbjct: 256 LQTSI 260

Pongo abelii (taxid: 9601)

>sp|Q9P0I2|EMC3_HUMAN ER membrane protein complex subunit 3 OS=Homo sapiens GN=EMC3 PE=1 SV=3

 Score =  252 bits (643), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 118/185 (63%), Positives = 148/185 (80%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct: 76  RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct: 136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
           SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct: 196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMAKDLHFEGMFKKE 255

Query: 182 LKGNL 186
           L+ ++
Sbjct: 256 LQTSI 260

Homo sapiens (taxid: 9606)

>sp|Q5U2V8|EMC3_RAT ER membrane protein complex subunit 3 OS=Rattus norvegicus GN=Emc3 PE=2 SV=3

 Score =  251 bits (642), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 118/185 (63%), Positives = 148/185 (80%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct: 76  RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct: 136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
           SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct: 196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMARDLHFEGMFKKE 255

Query: 182 LKGNL 186
           L+ ++
Sbjct: 256 LQTSI 260

Rattus norvegicus (taxid: 10116)

>sp|Q99KI3|EMC3_MOUSE ER membrane protein complex subunit 3 OS=Mus musculus GN=Emc3 PE=2 SV=3

 Score =  251 bits (642), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 118/185 (63%), Positives = 148/185 (80%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct: 76  RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct: 136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
           SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct: 196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMARDLHFEGMFKKE 255

Query: 182 LKGNL 186
           L+ ++
Sbjct: 256 LQTSI 260

Mus musculus (taxid: 10090)

>sp|Q3ZCB8|EMC3_BOVIN ER membrane protein complex subunit 3 OS=Bos taurus GN=EMC3 PE=2 SV=3

 Score =  250 bits (638), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 117/185 (63%), Positives = 148/185 (80%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           R+YYFN+ E G+F   KR     +P+TDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct: 76  RKYYFNNPEDGFFKKTKRKVVPPSPVTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct: 136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
           SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct: 196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMAKDLHFEGMFKKE 255

Query: 182 LKGNL 186
           L+ ++
Sbjct: 256 LQTSI 260

Bos taurus (taxid: 9913)

>sp|Q9P787|YNY3_SCHPO ER membrane protein complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1711.03 PE=3 SV=1

 Score =  118 bits (296), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 89/148 (60%), Gaps = 10/148 (6%)

Query: 23  ASNPMTDPSMMT---EMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQ 79
           A+NP+ D   +    E +KGN+  V+P  +I  WIN  FSGF+  K+PFPLTLRFK + Q
Sbjct: 99  AANPLMDDKTLEGLMESMKGNMLMVVPQTIIMTWINEFFSGFILLKLPFPLTLRFKSIFQ 158

Query: 80  RGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQ------FQDQMSGAA 133
            G+    LD  WVSS SWYFLN+FGL+S+YAL+LGENNAA  +        F    + A 
Sbjct: 159 SGVATQDLDVQWVSSISWYFLNLFGLKSVYALLLGENNAASNATNEMGMAGFSSAAATAQ 218

Query: 134 VQMP-VDPKAAFKAEWEALEIYQHQSAL 160
           +  P  D      +E E ++I +++S L
Sbjct: 219 LIQPGQDISKMMLSEAENVQILKNESLL 246

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q54YN3|EMC3_DICDI ER membrane protein complex subunit 3 OS=Dictyostelium discoideum GN=emc3 PE=3 SV=1

 Score =  116 bits (290), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 10/160 (6%)

Query: 20  TAPASNPM---------TDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPF-P 69
           T   SNPM         TDPS +T+MLKGN+ +++P + +  W+N  FSGFV  K+PF P
Sbjct: 101 TQEDSNPMNMMFANSMFTDPSGITDMLKGNIMHLIPQVTMMSWVNHFFSGFVACKLPFFP 160

Query: 70  LTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQM 129
           LT+RFK  LQRGIE+ SLD ++VSS SWYFL  FG   I A++LGEN  +  S+  Q  +
Sbjct: 161 LTIRFKTFLQRGIEMGSLDVSYVSSLSWYFLCWFGSEGINAILLGENMVSADSQLLQSSI 220

Query: 130 SGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIE 169
                         + +E E +E+ ++ S +  +    ++
Sbjct: 221 EPGPPTQQTPIHKIYASEKENIEMIRYDSLMTNIEDRFLD 260

Dictyostelium discoideum (taxid: 44689)

>sp|P36039|EMC3_YEAST ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMC3 PE=1 SV=3

 Score = 99.8 bits (247), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 25  NPMTDPSM---MTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRG 81
           NP  DPSM   M  M KGN+ + +P  +I  W+N  F+GF+  ++PFPLT +FK MLQ G
Sbjct: 104 NPFNDPSMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTG 163

Query: 82  IELLSLDPAWVSSASWYFLNVFGLRSIYALV-LGENNAADQSRQFQDQMSGAAVQMPVDP 140
           I    LD  WVSS SWYF++V GL  +Y L+ L + +   Q+     Q      Q  VD 
Sbjct: 164 IICQDLDVRWVSSISWYFISVLGLNPVYNLIGLNDQDMGIQAGIGGPQGPQGPPQSQVDK 223

Query: 141 KAAFKAEWEALEIYQHQSALEGLAAEMIE 169
             A  A    L I QH++ L+ +   +++
Sbjct: 224 --AMHAMANDLTIIQHETCLDNVEQRVLK 250

The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|A7A082|EMC3_YEAS7 ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain YJM789) GN=AIM27 PE=3 SV=2

 Score = 99.8 bits (247), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 25  NPMTDPSM---MTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRG 81
           NP  DPSM   M  M KGN+ + +P  +I  W+N  F+GF+  ++PFPLT +FK MLQ G
Sbjct: 104 NPFNDPSMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTG 163

Query: 82  IELLSLDPAWVSSASWYFLNVFGLRSIYALV-LGENNAADQSRQFQDQMSGAAVQMPVDP 140
           I    LD  WVSS SWYF++V GL  +Y L+ L + +   Q+     Q      Q  VD 
Sbjct: 164 IICQDLDVRWVSSISWYFISVLGLNPVYNLIGLNDQDMGIQAGIGGPQGPQGPPQSQVDK 223

Query: 141 KAAFKAEWEALEIYQHQSALEGLAAEMIE 169
             A  A    L I QH++ L+ +   +++
Sbjct: 224 --AMHAMANDLTIIQHETCLDNVEQRVLK 250

The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).

Saccharomyces cerevisiae (strain YJM789) (taxid: 307796)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	445
193704745	249	PREDICTED: transmembrane protein 111-lik	0.267	0.477	0.823	3e-76
383859750	252	PREDICTED: transmembrane protein 111-lik	0.312	0.551	0.748	1e-74
321455298	249	hypothetical protein DAPPUDRAFT_231825 [	0.287	0.514	0.779	2e-74
380028306	252	PREDICTED: transmembrane protein 111-lik	0.303	0.535	0.76	4e-74
242005716	263	protein pob, putative [Pediculus humanus	0.262	0.444	0.785	5e-74
66526450	252	PREDICTED: transmembrane protein 111-lik	0.303	0.535	0.76	7e-74
340727643	252	PREDICTED: transmembrane protein 111-lik	0.303	0.535	0.76	1e-73
427792853	250	Hypothetical protein, partial [Rhipiceph	0.287	0.512	0.797	2e-73
307211077	259	Protein pob [Harpegnathos saltator]	0.285	0.490	0.784	3e-73
332020625	259	Transmembrane protein 111 [Acromyrmex ec	0.388	0.667	0.751	5e-73

>gi|193704745|ref|XP_001945698.1| PREDICTED: transmembrane protein 111-like [Acyrthosiphon pisum] gi|328713382|ref|XP_003245055.1| PREDICTED: transmembrane protein 111-like [Acyrthosiphon pisum]

 Score =  291 bits (746), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 140/170 (82%), Positives = 150/170 (88%)

Query: 1   MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSG 60
           MRR+YFN+EE GYF TQKR APA   M DPSMMTEMLKGN+TNVLPM+VIGGWINWMFSG
Sbjct: 73  MRRHYFNNEENGYFKTQKRAAPAQTAMPDPSMMTEMLKGNVTNVLPMVVIGGWINWMFSG 132

Query: 61  FVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAAD 120
           FVTTKVPFPLTLRFKPMLQRGIEL+SLD AWVSSASWYFLNVFGLRSIYALVLGENNAAD
Sbjct: 133 FVTTKVPFPLTLRFKPMLQRGIELVSLDAAWVSSASWYFLNVFGLRSIYALVLGENNAAD 192

Query: 121 QSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEV 170
           QSR  QDQMSGAA+ MP+DPK AFKAEWEALEI  H+ AL  L  E++ V
Sbjct: 193 QSRLMQDQMSGAAMSMPMDPKVAFKAEWEALEISSHKWALADLDNEVLNV 242

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859750|ref|XP_003705355.1| PREDICTED: transmembrane protein 111-like [Megachile rotundata]

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 134/179 (74%), Positives = 156/179 (87%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           RR++FN+EE GYF TQKR   + NPMTDP+MMT+MLKGN+TNVLPM++IGGWINWMFSGF
Sbjct: 74  RRHFFNNEETGYFKTQKRAPVSQNPMTDPNMMTDMLKGNVTNVLPMVLIGGWINWMFSGF 133

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQRGIEL++LD AWVSSASWYFLNVFGLRSIY LVLGE+NAAD 
Sbjct: 134 VTTKVPFPLTLRFKPMLQRGIELVTLDAAWVSSASWYFLNVFGLRSIYTLVLGESNAADT 193

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTE 180
           SR  QDQ+SGAA+ MP DPKAAFK+EWEALEIY+H  AL+G+ A++I    TD S  ++
Sbjct: 194 SRLLQDQVSGAAMSMPPDPKAAFKSEWEALEIYEHNWALQGVEADLIGSQRTDSSECSK 252

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321455298|gb|EFX66435.1| hypothetical protein DAPPUDRAFT_231825 [Daphnia pulex]

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 131/168 (77%), Positives = 151/168 (89%)

Query: 1   MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSG 60
           MRR++FN E++GYF TQKR AP +NPMTDP+ MT+MLKGN+TNVLPMI+IGGWINW FSG
Sbjct: 73  MRRHFFNSEDMGYFKTQKRAAPTTNPMTDPNAMTDMLKGNVTNVLPMIIIGGWINWAFSG 132

Query: 61  FVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAAD 120
           FVTTKVPFPLTLRFKPMLQRG+EL+SLD +WVSSASWYFLNVFGLRSIY+LVLGENNAAD
Sbjct: 133 FVTTKVPFPLTLRFKPMLQRGVELVSLDASWVSSASWYFLNVFGLRSIYSLVLGENNAAD 192

Query: 121 QSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMI 168
           Q++   DQMSGAA+ MP DPKAAFKAEWE+LEI QHQ AL  + AE++
Sbjct: 193 QTKAMADQMSGAAMAMPQDPKAAFKAEWESLEIVQHQWALRNVEAELL 240

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028306|ref|XP_003697847.1| PREDICTED: transmembrane protein 111-like [Apis florea]

 Score =  285 bits (728), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 153/175 (87%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           RR++FN+EE GYF TQKR   + NPMTDP+MMT+MLKGN+TNV+PM++IGGWINWMFSGF
Sbjct: 74  RRHFFNNEETGYFKTQKRAPVSQNPMTDPNMMTDMLKGNVTNVIPMVLIGGWINWMFSGF 133

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQRGIEL +LD AWVSSASWYFLNVFGLRSIY LVLGE+NAAD 
Sbjct: 134 VTTKVPFPLTLRFKPMLQRGIELATLDAAWVSSASWYFLNVFGLRSIYTLVLGESNAADT 193

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPS 176
           SR  QDQ+SGAA+ MP DPKAAFK+EWEALEIY+H  AL+G+ A++I    TD S
Sbjct: 194 SRLLQDQVSGAAMSMPPDPKAAFKSEWEALEIYEHNWALQGVEADLIGSQRTDTS 248

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242005716|ref|XP_002423708.1| protein pob, putative [Pediculus humanus corporis] gi|212506893|gb|EEB10970.1| protein pob, putative [Pediculus humanus corporis]

 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 132/168 (78%), Positives = 149/168 (88%)

Query: 1   MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSG 60
           MRR++FN+EEVGYF TQKR A A NPMTDPSMMT+MLKGNL NV+PMI+IGGWINW FSG
Sbjct: 73  MRRHFFNNEEVGYFKTQKRNAVAQNPMTDPSMMTDMLKGNLINVVPMIMIGGWINWTFSG 132

Query: 61  FVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAAD 120
           FVTTKVPFPLTLRFK MLQRGIEL+SLD +WVSSASWYFLNVFGLRSIY LVLGENNAAD
Sbjct: 133 FVTTKVPFPLTLRFKSMLQRGIELVSLDASWVSSASWYFLNVFGLRSIYTLVLGENNAAD 192

Query: 121 QSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMI 168
           Q++  Q+QMSGAA+ MP DPKAAFKAEWEALE+ +HQ  L+ +  E+I
Sbjct: 193 QTQHIQEQMSGAAMAMPSDPKAAFKAEWEALELAEHQYGLKNIENELI 240

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66526450|ref|XP_623902.1| PREDICTED: transmembrane protein 111-like [Apis mellifera]

 Score =  284 bits (726), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 153/175 (87%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           RR++FN+EE GYF TQKR   + NPMTDP+MMT+MLKGN+TNV+PM++IGGWINWMFSGF
Sbjct: 74  RRHFFNNEETGYFKTQKRAPVSQNPMTDPNMMTDMLKGNVTNVIPMVLIGGWINWMFSGF 133

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQRGIEL +LD AWVSSASWYFLNVFGLRSIY LVLGE+NAAD 
Sbjct: 134 VTTKVPFPLTLRFKPMLQRGIELATLDAAWVSSASWYFLNVFGLRSIYTLVLGESNAADT 193

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPS 176
           SR  QDQ+SGAA+ MP DPKAAFK+EWEALEIY+H  AL+G+ A++I    TD S
Sbjct: 194 SRLLQDQVSGAAMSMPPDPKAAFKSEWEALEIYEHNWALQGVEADLIGSQRTDIS 248

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340727643|ref|XP_003402149.1| PREDICTED: transmembrane protein 111-like [Bombus terrestris] gi|350412035|ref|XP_003489523.1| PREDICTED: transmembrane protein 111-like [Bombus impatiens]

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 152/175 (86%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           RR++FN+EE GYF TQKR   + NPMTDP+MMT+MLKGN+TNVLPM++IGGWINWMFSGF
Sbjct: 74  RRHFFNNEETGYFKTQKRAPVSQNPMTDPNMMTDMLKGNVTNVLPMVLIGGWINWMFSGF 133

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQRGIEL +LD AWVSSASWYFLNVFGLRSIY LVLGE+NAAD 
Sbjct: 134 VTTKVPFPLTLRFKPMLQRGIELATLDAAWVSSASWYFLNVFGLRSIYTLVLGESNAADT 193

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPS 176
           SR  QDQ+SGAA+ MP DPKAAFK+EWEALEIY+H  AL+G+ A++I     D S
Sbjct: 194 SRLLQDQVSGAAMSMPPDPKAAFKSEWEALEIYEHNWALQGVEADLIGSQRIDTS 248

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427792853|gb|JAA61878.1| Hypothetical protein, partial [Rhipicephalus pulchellus]

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 134/168 (79%), Positives = 149/168 (88%)

Query: 1   MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSG 60
           MR+ +FN+EE GYF TQKRT    NPMTDPS+MT+MLKGNLTNVLPMIVIGGWINW FSG
Sbjct: 67  MRKNFFNNEETGYFKTQKRTPVMQNPMTDPSVMTDMLKGNLTNVLPMIVIGGWINWTFSG 126

Query: 61  FVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAAD 120
           FVTTKVPFPLTLRFKPMLQRGIEL+SLD +WVSSASWYFLNVFGLRSIYALVLGENNAAD
Sbjct: 127 FVTTKVPFPLTLRFKPMLQRGIELMSLDASWVSSASWYFLNVFGLRSIYALVLGENNAAD 186

Query: 121 QSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMI 168
           Q+R  QDQMSGAA+ MP DPK AFKAEWEALEI +HQ A++ +  E++
Sbjct: 187 QTRVMQDQMSGAALAMPPDPKQAFKAEWEALEICEHQWAMKNVEEELL 234

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211077|gb|EFN87320.1| Protein pob [Harpegnathos saltator]

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 131/167 (78%), Positives = 150/167 (89%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           RR++FN+EE GYF TQKR   + NPMTDP+MMT+MLKGN+TNVLPM++IGGWINWMFSGF
Sbjct: 74  RRHFFNNEETGYFKTQKRAPVSQNPMTDPNMMTDMLKGNVTNVLPMVLIGGWINWMFSGF 133

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQRGIEL++LD AWVSSASWYFLNVFGLRSIY LVLGENNAAD 
Sbjct: 134 VTTKVPFPLTLRFKPMLQRGIELVTLDAAWVSSASWYFLNVFGLRSIYTLVLGENNAADT 193

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMI 168
           SR  QDQ+SGAA+ MP DPKAAFK+EWEALEI +H  AL+G+ AE++
Sbjct: 194 SRLLQDQVSGAAMSMPPDPKAAFKSEWEALEICEHNWALQGVDAELM 240

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020625|gb|EGI61032.1| Transmembrane protein 111 [Acromyrmex echinatior]

 Score =  281 bits (719), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 133/177 (75%), Positives = 155/177 (87%), Gaps = 4/177 (2%)

Query: 2   RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
           RR++FN+EE GYF TQKR   + NPMTDP+MMTEMLKGN+TNVLPM++IGGWINWMFSGF
Sbjct: 74  RRHFFNNEETGYFKTQKRPPVSQNPMTDPNMMTEMLKGNVTNVLPMVLIGGWINWMFSGF 133

Query: 62  VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
           VTTKVPFPLTLRFKPMLQRGIEL++LD AWVSSASWYFLNVFGLRSIY LVLGENNAAD 
Sbjct: 134 VTTKVPFPLTLRFKPMLQRGIELVTLDAAWVSSASWYFLNVFGLRSIYTLVLGENNAADT 193

Query: 122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMI----EVDMTD 174
           +R  QDQ+SGAA+ MP DPKAAFK+EWEALEI +H  AL+G+  E++    ++D+TD
Sbjct: 194 TRVVQDQVSGAAMSMPPDPKAAFKSEWEALEICEHNWALQGVDIELMGIQSKMDLTD 250

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	445
ZFIN|ZDB-GENE-050102-7	253	zgc:86609 "zgc:86609" [Danio r	0.386	0.679	0.709	2.5e-65
ZFIN|ZDB-GENE-040426-2904	261	emc3 "ER membrane protein comp	0.408	0.697	0.664	3.7e-64
FB|FBgn0032292	247	CG6750 [Drosophila melanogaste	0.375	0.676	0.711	1.8e-62
UNIPROTKB|E1BQV4	261	TMEM111 "Uncharacterized prote	0.415	0.708	0.648	1.8e-62
UNIPROTKB|F1SQC6	261	EMC3 "Uncharacterized protein"	0.415	0.708	0.643	2.3e-62
UNIPROTKB|Q9P0I2	261	EMC3 "ER membrane protein comp	0.415	0.708	0.637	4.8e-62
UNIPROTKB|Q5R7C1	261	EMC3 "ER membrane protein comp	0.415	0.708	0.637	4.8e-62
MGI|MGI:1913337	261	Emc3 "ER membrane protein comp	0.415	0.708	0.637	6.2e-62
RGD|1311566	261	Emc3 "ER membrane protein comp	0.415	0.708	0.637	6.2e-62
UNIPROTKB|Q3ZCB8	261	EMC3 "ER membrane protein comp	0.415	0.708	0.632	1.3e-61

ZFIN|ZDB-GENE-050102-7 zgc:86609 "zgc:86609" [Danio rerio (taxid:7955)]

 Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
 Identities = 122/172 (70%), Positives = 146/172 (84%)

Query:     1 MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSG 60
             MR++YFN+ E G+F   KR     NPMTDPSM+T+M+KGNLTNVLPMI+IGGWINW FSG
Sbjct:    75 MRKHYFNNPETGFFKKVKRKVTPKNPMTDPSMLTDMMKGNLTNVLPMILIGGWINWAFSG 134

Query:    61 FVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAAD 120
             F+TTKVPFPLTLRFKPMLQRGIEL+SLD +WVSSASWYFLNVFGLRS+Y L+LG++NAAD
Sbjct:   135 FLTTKVPFPLTLRFKPMLQRGIELVSLDASWVSSASWYFLNVFGLRSMYTLILGQDNAAD 194

Query:   121 QSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDM 172
             QSR  QDQM+GAA+ MP DP  AFK+EWEALEI +H+ ALE +  E++  D+
Sbjct:   195 QSRIMQDQMTGAAMAMPPDPNKAFKSEWEALEIVEHKWALENVEEELMCQDL 246

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-040426-2904 emc3 "ER membrane protein complex subunit 3" [Danio rerio (taxid:7955)]

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 121/182 (66%), Positives = 149/182 (81%)

Query:     1 MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSG 60
             MR++YFN++E G+F   KR     +PMTDPSM+T+M+KGN+TNVLPMI+IGGWINW FSG
Sbjct:    75 MRKFYFNNQEDGFFKKTKRKVVPPSPMTDPSMLTDMMKGNVTNVLPMILIGGWINWTFSG 134

Query:    61 FVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAAD 120
             FVTTKVPFPLTLRFKPMLQ+GIELLSLD +WVSSASWYFLNVFGLRS+Y+L+LG++N AD
Sbjct:   135 FVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFGLRSMYSLILGQDNGAD 194

Query:   121 QSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTE 180
             QSR  Q+QMSGAA+ MP D   AFKAEWEALE+  HQ ALE +  +++  D+    M ++
Sbjct:   195 QSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVEEDLMSKDLDLSGMFSK 254

Query:   181 ML 182
              L
Sbjct:   255 DL 256

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0030140 "trans-Golgi network transport vesicle" evidence=IDA

GO:0045494 "photoreceptor cell maintenance" evidence=IMP

GO:0060041 "retina development in camera-type eye" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

FB|FBgn0032292 CG6750 [Drosophila melanogaster (taxid:7227)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 121/170 (71%), Positives = 141/170 (82%)

Query:     1 MRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSG 60
             MR+ YFN+EE GYF TQKR   A N     +M+T+M+KGN  NVLPM+VIGGWINWMFSG
Sbjct:    73 MRKNYFNNEETGYFKTQKRAPVAQN---SSAMLTDMVKGNFINVLPMVVIGGWINWMFSG 129

Query:    61 FVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAAD 120
             FVTTKVPFPLTLRFKPMLQRG+EL SLD AWVSSASWYFLNVFGLRSIY LVLGENN AD
Sbjct:   130 FVTTKVPFPLTLRFKPMLQRGVELASLDAAWVSSASWYFLNVFGLRSIYTLVLGENNHAD 189

Query:   121 QSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEV 170
             Q++   D M+GAA+ MP DPKAAFKAEWEALEI ++ +AL+ + A+M+ +
Sbjct:   190 QTQAQADAMTGAAMTMPQDPKAAFKAEWEALEITEYHNALKNIDADMLAI 239

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0042060 "wound healing" evidence=IMP

UNIPROTKB|E1BQV4 TMEM111 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 120/185 (64%), Positives = 147/185 (79%)

Query:     2 RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
             R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct:    76 RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query:    62 VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
             VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY L+LG++NAADQ
Sbjct:   136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYTLILGQDNAADQ 195

Query:   122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
             SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ ALE +  E++  D+    M  E 
Sbjct:   196 SRVMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALEDVEEELMAKDLHFEGMFKEE 255

Query:   182 LKGNL 186
             L+ ++
Sbjct:   256 LQTSI 260

GO:0072546 "ER membrane protein complex" evidence=IEA

UNIPROTKB|F1SQC6 EMC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 119/185 (64%), Positives = 148/185 (80%)

Query:     2 RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
             R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct:    76 RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query:    62 VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
             VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct:   136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query:   122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
             SR  Q+QM+GAAV MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct:   196 SRMMQEQMTGAAVAMPADTNKAFKTEWEALELTDHQWALDDVEEELMAKDLHFEGMFKKE 255

Query:   182 LKGNL 186
             L+ ++
Sbjct:   256 LQTSI 260

GO:0072546 "ER membrane protein complex" evidence=IEA

UNIPROTKB|Q9P0I2 EMC3 "ER membrane protein complex subunit 3" [Homo sapiens (taxid:9606)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 118/185 (63%), Positives = 148/185 (80%)

Query:     2 RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
             R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct:    76 RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query:    62 VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
             VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct:   136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query:   122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
             SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct:   196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMAKDLHFEGMFKKE 255

Query:   182 LKGNL 186
             L+ ++
Sbjct:   256 LQTSI 260

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0072546 "ER membrane protein complex" evidence=IDA

GO:0016021 "integral to membrane" evidence=IDA

UNIPROTKB|Q5R7C1 EMC3 "ER membrane protein complex subunit 3" [Pongo abelii (taxid:9601)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 118/185 (63%), Positives = 148/185 (80%)

Query:     2 RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
             R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct:    76 RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query:    62 VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
             VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct:   136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query:   122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
             SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct:   196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMAKDLHFEGMFKKE 255

Query:   182 LKGNL 186
             L+ ++
Sbjct:   256 LQTSI 260

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

MGI|MGI:1913337 Emc3 "ER membrane protein complex subunit 3" [Mus musculus (taxid:10090)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 118/185 (63%), Positives = 148/185 (80%)

Query:     2 RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
             R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct:    76 RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query:    62 VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
             VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct:   136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query:   122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
             SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct:   196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMARDLHFEGMFKKE 255

Query:   182 LKGNL 186
             L+ ++
Sbjct:   256 LQTSI 260

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISO

GO:0072546 "ER membrane protein complex" evidence=ISO

RGD|1311566 Emc3 "ER membrane protein complex subunit 3" [Rattus norvegicus (taxid:10116)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 118/185 (63%), Positives = 148/185 (80%)

Query:     2 RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
             R+YYFN+ E G+F   KR     +PMTDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct:    76 RKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query:    62 VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
             VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct:   136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query:   122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
             SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct:   196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMARDLHFEGMFKKE 255

Query:   182 LKGNL 186
             L+ ++
Sbjct:   256 LQTSI 260

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=ISO;ISS

GO:0072546 "ER membrane protein complex" evidence=ISO;ISS

UNIPROTKB|Q3ZCB8 EMC3 "ER membrane protein complex subunit 3" [Bos taurus (taxid:9913)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 117/185 (63%), Positives = 148/185 (80%)

Query:     2 RRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGF 61
             R+YYFN+ E G+F   KR     +P+TDP+M+T+M+KGN+TNVLPMI+IGGWIN  FSGF
Sbjct:    76 RKYYFNNPEDGFFKKTKRKVVPPSPVTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGF 135

Query:    62 VTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQ 121
             VTTKVPFPLTLRFKPMLQ+GIELL+LD +WVSSASWYFLNVFGLRSIY+L+LG++NAADQ
Sbjct:   136 VTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQ 195

Query:   122 SRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMIEVDMTDPSMMTEM 181
             SR  Q+QM+GAA+ MP D   AFK EWEALE+  HQ AL+ +  E++  D+    M  + 
Sbjct:   196 SRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMAKDLHFEGMFKKE 255

Query:   182 LKGNL 186
             L+ ++
Sbjct:   256 LQTSI 260

GO:0072546 "ER membrane protein complex" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9P0I2	EMC3_HUMAN	No assigned EC number	0.6378	0.3258	0.5555	yes	N/A
Q5R7C1	EMC3_PONAB	No assigned EC number	0.6378	0.3258	0.5555	yes	N/A
Q99KI3	EMC3_MOUSE	No assigned EC number	0.6378	0.3258	0.5555	yes	N/A
Q3ZCB8	EMC3_BOVIN	No assigned EC number	0.6324	0.3258	0.5555	yes	N/A
Q5U2V8	EMC3_RAT	No assigned EC number	0.6378	0.3258	0.5555	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	445
pfam01956	168	pfam01956, DUF106, Integral membrane protein DUF10	4e-31
pfam01956	168	pfam01956, DUF106, Integral membrane protein DUF10	7e-25
pfam01956	168	pfam01956, DUF106, Integral membrane protein DUF10	2e-17

>gnl|CDD|216807 pfam01956, DUF106, Integral membrane protein DUF106

 Score =  116 bits (294), Expect = 4e-31
 Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 2/87 (2%)

Query: 31  SMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPA 90
            MM +M+K N   ++P I+I GWIN  FSGFV  K+PFPLT RFK MLQRG++   LD  
Sbjct: 84  EMMMDMMKPNFAIMIPQILIFGWINSFFSGFVVAKLPFPLTGRFKGMLQRGVD--GLDVT 141

Query: 91  WVSSASWYFLNVFGLRSIYALVLGENN 117
            VSS SWYFL  FGLR +   +LG  N
Sbjct: 142 DVSSISWYFLCSFGLRQVIQKLLGFAN 168

This archaebacterial protein family has no known function. Members are predicted to be integral membrane proteins. Length = 168

>gnl|CDD|216807 pfam01956, DUF106, Integral membrane protein DUF106

 Score =  100 bits (250), Expect = 7e-25
 Identities = 53/175 (30%), Positives = 71/175 (40%), Gaps = 61/175 (34%)

Query: 218 RFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLT 277
           R + + + G  L+   F+ R+    +++                     MM +M+K N  
Sbjct: 55  RARELRKNGDKLSPKKFEKRQEELMEDQKE-------------------MMMDMMKPNFA 95

Query: 278 NVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLR 337
            ++P I+I GWIN                               FSGFV  K+PFPLT R
Sbjct: 96  IMIPQILIFGWINSF-----------------------------FSGFVVAKLPFPLTGR 126

Query: 338 FKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENN 392
           FK MLQR + G             LD   VSS SWYFL  FGLR +   +LG  N
Sbjct: 127 FKGMLQRGVDG-------------LDVTDVSSISWYFLCSFGLRQVIQKLLGFAN 168

This archaebacterial protein family has no known function. Members are predicted to be integral membrane proteins. Length = 168

>gnl|CDD|216807 pfam01956, DUF106, Integral membrane protein DUF106

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 6/89 (6%)

Query: 141 KAAFKAEWEALEIYQHQSALEGLAA---EMIEVDMTDPSMMTEMLKGNLTNVLPMIVIGG 197
           +   +     L     + + +       E++E       MM +M+K N   ++P I+I G
Sbjct: 49  EKEIQKRARELRKNGDKLSPKKFEKRQEELMEDQK---EMMMDMMKPNFAIMIPQILIFG 105

Query: 198 WINWMFSGFVTTKVPFPLTLRFKPMLQRG 226
           WIN  FSGFV  K+PFPLT RFK MLQRG
Sbjct: 106 WINSFFSGFVVAKLPFPLTGRFKGMLQRG 134

This archaebacterial protein family has no known function. Members are predicted to be integral membrane proteins. Length = 168

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	445
KOG3188|consensus	246		100.0
KOG3188|consensus	246		100.0
PF01956	168	DUF106: Integral membrane protein DUF106; InterPro	99.97
PF01956	168	DUF106: Integral membrane protein DUF106; InterPro	99.96
KOG3312|consensus	186		98.47
KOG3312|consensus	186		83.15

>KOG3188|consensus

Probab=100.00  E-value=4.7e-80  Score=580.93  Aligned_cols=190  Identities=57%  Similarity=1.023  Sum_probs=182.8

Q ss_pred             hhHHhHHHHhhcCCCCCHHHHHHHHHHhhccccccccccCCCCC--CCCCCCCchHHHHHHhhhhhhhhhHHHHHHHHHH
Q psy13952        214 PLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQKRTAP--ASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINW  291 (445)
Q Consensus       214 ~~~~R~~~lr~~g~~l~~~aF~~Rk~y~~~~~~g~~~~~~~~~~--~~npmtDPs~m~~mmKgn~~~~~P~~vi~~wIn~  291 (445)
                      -.++||+.||+||++|+++||.+||+||+++|+|||++.|+.++  +++|++||+|||||||||+.|+||||+|||||||
T Consensus        52 q~l~rAr~Lr~ng~~l~~~Sf~aRk~yl~~~e~g~l~~~k~~~~~~~~~~~~DpsmlmdmmKgNm~~viPqtii~~WiN~  131 (246)
T KOG3188|consen   52 QYLIRARLLRENGNFLPPQSFAARKEYLNNEETGYLKKAKQQAAGEAPPPFNDPSMLMDMMKGNMANVIPQTIIGGWINW  131 (246)
T ss_pred             HHHHHHHHHHhccCCCCHHHHHHHHHHhhcccccccccccccccCCCCCCCCCHHHHHHHHhhhHHHHhHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998877654  7789999999999999999999999999999999


Q ss_pred             HhhhceeecccccccccchhhhhhcccccccccccccccCCccccccccchhhhcccCCCcCCCCccccCCCccchhhhh
Q psy13952        292 MFSGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSAS  371 (445)
Q Consensus       292 fFsGFV~~KvPFPLT~rFK~MLQr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~l~~LD~~wVSS~S  371 (445)
                      ||||||++|||||||+|||+||||                                        ||++.|||++||||+|
T Consensus       132 fFSGFv~~kvPFPLTlrFK~MlQ~----------------------------------------Gi~l~~LDv~wVSS~S  171 (246)
T KOG3188|consen  132 FFSGFVTTKVPFPLTLRFKSMLQR----------------------------------------GIDLQDLDVSWVSSAS  171 (246)
T ss_pred             HHHHHHHhcCCchhHHHHHHHHHc----------------------------------------CchhhhcchhHhhhhH
Confidence            999999999999999999999999                                        9999999999999999


Q ss_pred             HHHHHHhhhHHHHHHHhCCcchhhhHHHHHhhccCCCCCCCCCHHHHHHHHHHhhccccccccccchHHhhhc
Q psy13952        372 WYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQSALEGLAAEMID  444 (445)
Q Consensus       372 WYFLn~fGL~~iy~L~lg~~naad~~~~~~~qm~g~~~~~~~d~~k~fkae~e~L~i~~h~~~l~~~e~~~l~  444 (445)
                      |||||+|||||||+|+|||+|||||++.+++ |.|.++++|+|+.||||+|||+|+|++|||+|.++|+|++.
T Consensus       172 WYFLnvfGLrsiysLiLG~~Naadq~~~~~~-M~G~~~~~p~d~~ka~~~e~e~lqi~~h~~al~~ve~~~~a  243 (246)
T KOG3188|consen  172 WYFLNVFGLRSIYSLILGEENAADQTQAMMD-MTGFAMAMPQDASKAFKAEWEALQIIQHEWALIDVEKRLLA  243 (246)
T ss_pred             HHHHHHhhhHHHHHHHhcccccccHHHHHHH-hcccccCCccchHHHHHhHHHHHHHHHHHhhhhhHHHHHHH
Confidence            9999999999999999999999999999877 88999999999999999999999999999999999999974

>KOG3188|consensus

Probab=100.00  E-value=1.6e-70  Score=516.56  Aligned_cols=170  Identities=62%  Similarity=1.071  Sum_probs=160.2

Q ss_pred             CccccccccccccccccCCCC--CCCCCCCCchHHHHHHhhhhhhHHHHHHHHHHHHHhhccceeeeecCCChhhhhHHh
Q psy13952          1 MRRYYFNDEEVGYFLTQKRTA--PASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPML   78 (445)
Q Consensus         1 ~RK~yf~~~e~G~lk~~k~~~--~p~NPmtDPs~Mm~MMKgNm~~mIPq~vIm~WIN~FFSGFVv~KLPFPLT~rFK~ML   78 (445)
                      +||+||+++|+|||++.|++.  ++++||+||++|||||||||.|+||||+||+|||+||||||++|||||||.|||+||
T Consensus        74 aRk~yl~~~e~g~l~~~k~~~~~~~~~~~~DpsmlmdmmKgNm~~viPqtii~~WiN~fFSGFv~~kvPFPLTlrFK~Ml  153 (246)
T KOG3188|consen   74 ARKEYLNNEETGYLKKAKQQAAGEAPPPFNDPSMLMDMMKGNMANVIPQTIIGGWINWFFSGFVTTKVPFPLTLRFKSML  153 (246)
T ss_pred             HHHHHhhcccccccccccccccCCCCCCCCCHHHHHHHHhhhHHHHhHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence            599999999999998876543  357889999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCCCchhhhhhHHHHHHHhhhHHHHHHHhCCcchhhhhHHHHHhccCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy13952         79 QRGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGENNAADQSRQFQDQMSGAAVQMPVDPKAAFKAEWEALEIYQHQS  158 (445)
Q Consensus        79 QRGIel~dLDvswVSSlSWYFLnlFGLr~Vy~LlLG~dnaad~~~~mq~qm~g~~~~~~~D~~K~FkaE~EnLei~~He~  158 (445)
                      ||||++.||||+||||+||||||+|||||||+||||++|+|||++.|++ |+|.++++++|+.|+|++|||+|++++|+|
T Consensus       154 Q~Gi~l~~LDv~wVSS~SWYFLnvfGLrsiysLiLG~~Naadq~~~~~~-M~G~~~~~p~d~~ka~~~e~e~lqi~~h~~  232 (246)
T KOG3188|consen  154 QRGIDLQDLDVSWVSSASWYFLNVFGLRSIYSLILGEENAADQTQAMMD-MTGFAMAMPQDASKAFKAEWEALQIIQHEW  232 (246)
T ss_pred             HcCchhhhcchhHhhhhHHHHHHHhhhHHHHHHHhcccccccHHHHHHH-hcccccCCccchHHHHHhHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999988765 888777788999999999999999999999


Q ss_pred             ccccHHHHHHhhc
Q psy13952        159 ALEGLAAEMIEVD  171 (445)
Q Consensus       159 ~Ld~iE~RLL~~~  171 (445)
                      +|.++|+|++..+
T Consensus       233 al~~ve~~~~a~~  245 (246)
T KOG3188|consen  233 ALIDVEKRLLAQF  245 (246)
T ss_pred             hhhhHHHHHHHhh
Confidence            9999999999754

>PF01956 DUF106: Integral membrane protein DUF106; InterPro: IPR002809 This entry represents a group of eukaryotic and archaeal proteins that have no known function

Probab=99.97  E-value=6.9e-31  Score=234.84  Aligned_cols=118  Identities=42%  Similarity=0.757  Sum_probs=112.1

Q ss_pred             hhHHhHHHHhhcCCCCCHHHHHHHHHHhhccccccccccCCCCCCCCCCCCchHHHHHHhhhhhhhhhHHHHHHHHHHHh
Q psy13952        214 PLTLRFKPMLQRGKYLTRSAFQMRRYYFNDEEVGYFLTQKRTAPASNPMTDPSMMTEMLKGNLTNVLPMIVIGGWINWMF  293 (445)
Q Consensus       214 ~~~~R~~~lr~~g~~l~~~aF~~Rk~y~~~~~~g~~~~~~~~~~~~npmtDPs~m~~mmKgn~~~~~P~~vi~~wIn~fF  293 (445)
                      -+..|++.++.++..++.++|+.|+.++++.+.+.                   |++|||+|+.+++|+++|++|||+||
T Consensus        51 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-------------------~~~~mK~~~~~~v~~i~i~~wi~~~f  111 (168)
T PF01956_consen   51 EFQKRYRELRKNGDFKKPKKLEKRQMELMEKQQEM-------------------MMMMMKPMFVTMVPQIPIFYWINYFF  111 (168)
T ss_pred             HHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHH-------------------HHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence            36778899999999999999999999999865554                   89999999999999999999999999


Q ss_pred             hhceeecccccccccchhhhhhcccccccccccccccCCccccccccchhhhcccCCCcCCCCccccCCCccchhhhhHH
Q psy13952        294 SGFVTTKVPFPLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNATFSPTGIELLSLDPAWVSSASWY  373 (445)
Q Consensus       294 sGFV~~KvPFPLT~rFK~MLQr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~l~~LD~~wVSS~SWY  373 (445)
                      +|||++|+|||||.+||.|+||                                        |+  +++|++||||+|||
T Consensus       112 ~g~vv~klPFpl~~~f~~~~qr----------------------------------------gl--~~~d~~~~s~i~wY  149 (168)
T PF01956_consen  112 SGFVVAKLPFPLTGRFKSMLQR----------------------------------------GL--EGLDVSYVSSISWY  149 (168)
T ss_pred             hhcceEEeeccccHHHhHHhhc----------------------------------------CC--CCCcccHhHHHHHH
Confidence            9999999999999999999999                                        99  99999999999999


Q ss_pred             HHHHhhhHHHHHHHhCCcc
Q psy13952        374 FLNVFGLRSIYALVLGENN  392 (445)
Q Consensus       374 FLn~fGL~~iy~L~lg~~n  392 (445)
                      |||.||+|++++++||++|
T Consensus       150 fL~s~~~~~vi~k~lg~~n  168 (168)
T PF01956_consen  150 FLCSFGLRQVIRKLLGENN  168 (168)
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999987

Members are predicted to be integral membrane proteins.; GO: 0016020 membrane

>PF01956 DUF106: Integral membrane protein DUF106; InterPro: IPR002809 This entry represents a group of eukaryotic and archaeal proteins that have no known function

Probab=99.96  E-value=2.4e-29  Score=224.89  Aligned_cols=85  Identities=56%  Similarity=0.946  Sum_probs=82.7

Q ss_pred             hHHHHHHhhhhhhHHHHHHHHHHHHHhhccceeeeecCCChhhhhHHhhccccCCCCCchhhhhhHHHHHHHhhhHHHHH
Q psy13952         31 SMMTEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSLDPAWVSSASWYFLNVFGLRSIYA  110 (445)
Q Consensus        31 s~Mm~MMKgNm~~mIPq~vIm~WIN~FFSGFVv~KLPFPLT~rFK~MLQRGIel~dLDvswVSSlSWYFLnlFGLr~Vy~  110 (445)
                      .+|++|||+|+.++||+++|++|||+||+|||++|+|||||.+||.|+|||+  +++|++||||+||||||.||+|++++
T Consensus        84 ~~~~~~mK~~~~~~v~~i~i~~wi~~~f~g~vv~klPFpl~~~f~~~~qrgl--~~~d~~~~s~i~wYfL~s~~~~~vi~  161 (168)
T PF01956_consen   84 EMMMMMMKPMFVTMVPQIPIFYWINYFFSGFVVAKLPFPLTGRFKSMLQRGL--EGLDVSYVSSISWYFLCSFGLRQVIR  161 (168)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHhhhcceEEeeccccHHHhHHhhcCC--CCCcccHhHHHHHHHHHHHHHHHHHH
Confidence            3479999999999999999999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHhCCcc
Q psy13952        111 LVLGENN  117 (445)
Q Consensus       111 LlLG~dn  117 (445)
                      ++||++|
T Consensus       162 k~lg~~n  168 (168)
T PF01956_consen  162 KLLGENN  168 (168)
T ss_pred             HHhCCCC
Confidence            9999986

Members are predicted to be integral membrane proteins.; GO: 0016020 membrane

>KOG3312|consensus

Probab=98.47  E-value=4.9e-07  Score=83.89  Aligned_cols=82  Identities=21%  Similarity=0.296  Sum_probs=75.2

Q ss_pred             HHHHhhhhhhHHHHHHHHHHHHHhhccceeeeecCCChhhhhHHhhccccCCCC-CchhhhhhHHHHHHHhhhHHHHHHH
Q psy13952         34 TEMLKGNLTNVLPMIVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGIELLSL-DPAWVSSASWYFLNVFGLRSIYALV  112 (445)
Q Consensus        34 m~MMKgNm~~mIPq~vIm~WIN~FFSGFVv~KLPFPLT~rFK~MLQRGIel~dL-DvswVSSlSWYFLnlFGLr~Vy~Ll  112 (445)
                      +=-||.-++.-+.-+++++-.|..|.|-||+||||-...--+.|.||++-..|. |||++   ..|.||-..+|...+.+
T Consensus        85 l~kmKsmfaigl~ftal~~~fNSiFeGrVVAkLPF~Pis~iqglSHRnL~GdD~TDCSfi---FLYiLCtmsiRqNlQK~  161 (186)
T KOG3312|consen   85 LFKMKSMFAIGLAFTALLGMFNSIFEGRVVAKLPFTPISIIQGLSHRNLKGDDMTDCSFI---FLYILCTMSIRQNLQKI  161 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCcchHHHhcccccCCCCCCccchHHH---HHHHHHHHHHHHHHHHH
Confidence            445788888888899999999999999999999998888899999999999998 99998   99999999999999999


Q ss_pred             hCCcch
Q psy13952        113 LGENNA  118 (445)
Q Consensus       113 LG~dna  118 (445)
                      ||-...
T Consensus       162 LGfaPs  167 (186)
T KOG3312|consen  162 LGFAPS  167 (186)
T ss_pred             hCcCCc
Confidence            998543

>KOG3312|consensus

Probab=83.15  E-value=5.6  Score=37.96  Aligned_cols=76  Identities=28%  Similarity=0.444  Sum_probs=51.4

Q ss_pred             hhhhhhhhhHHHHHHHHHHHhhhceeecccc-cccccchhhhhhcccccccccccccccCCccccccccchhhhcccCCC
Q psy13952        273 KGNLTNVLPMIVIGGWINWMFSGFVTTKVPF-PLTLRFKPMLQRGWINWMFSGFVTTKVPFPLTLRFKPMLQRDILGNAT  351 (445)
Q Consensus       273 Kgn~~~~~P~~vi~~wIn~fFsGFV~~KvPF-PLT~rFK~MLQr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (445)
                      |.-.+--+--+++++-.|..|-|=|++|+|| |++.     .|-                         +-.|.+.|.  
T Consensus        89 Ksmfaigl~ftal~~~fNSiFeGrVVAkLPF~Pis~-----iqg-------------------------lSHRnL~Gd--  136 (186)
T KOG3312|consen   89 KSMFAIGLAFTALLGMFNSIFEGRVVAKLPFTPISI-----IQG-------------------------LSHRNLKGD--  136 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcceeEEecCCcchHH-----Hhc-------------------------ccccCCCCC--
Confidence            3333344456788999999999999999999 7653     232                         222333332  


Q ss_pred             cCCCCccccCCCccchhhhhHHHHHHhhhHHHHHHHhCCc
Q psy13952        352 FSPTGIELLSLDPAWVSSASWYFLNVFGLRSIYALVLGEN  391 (445)
Q Consensus       352 ~~~~Gi~l~~LD~~wVSS~SWYFLn~fGL~~iy~L~lg~~  391 (445)
                                 |..=-|=+--|.||-..+|-=.+-+||=.
T Consensus       137 -----------D~TDCSfiFLYiLCtmsiRqNlQK~LGfa  165 (186)
T KOG3312|consen  137 -----------DMTDCSFIFLYILCTMSIRQNLQKILGFA  165 (186)
T ss_pred             -----------CccchHHHHHHHHHHHHHHHHHHHHhCcC
Confidence                       22223446678888888999899999874

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00