Psyllid ID: psy14071

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410----

MERRKRVEMIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLEKKEKRWRIGGMEFEALMRMLDNAKIPTGYSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVSTLNPLVLKGNILQSNLS

cccHHHHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccEEEEccccccccccccccEEEEccccccccccccccccccccHHHHHHHHHHcccccEEEEccccccccHHccccccccccHHHHcccccEEEccccccccHHHHHHHHHHccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccc

cHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHcEEEEEccccccEEEEcccccEEcEEEHccEEEEEccccEEccccccccccccccHHHHHHHHcccccEEEEEEccHHHHHHHHHHcccccccHHHEEEccEEEEccccccccHHHHHHHHHHHccccEEEEEEcccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccccccEcccHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccccc

MERRKRVEMIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMGLQgqrlqsahlfrssncvvpindirgvesmgyakgeKILRCKVAAVYRLMDLYGWTQNIQNHITARlnvdeeiflvnphgllyneitasslvkvdmrgdiiepgttnfgvntaTFSVHAAIHAARPDLKAIIHVATPAVVAVSSLkcgllplsresvvlgelsthpftgysrgdeeKERIVRnlgpnnkvlflsnngavccgeTVEEAFYNVYNLVAACEAQLKLMpagldnlvlipedvrkeiydssrvcpegaipagtnsptpavleKKEKRWRIGGMEFEALMRMLdnakiptgyssncvvpindirgvesmgyakgeKILRCKVAAVYRLMDLYGWTQNIQNHITVSTLNplvlkgnilqsnls

merrkrvemimnsrlFREELERIIEIQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRSSNCVVPINDIRGvesmgyakgekILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSResvvlgelsthpftgysrgdeeKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVcpegaipagtnsptpavlekkekRWRIGGMEFEALMRMLDNAKIPTGYSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVstlnplvlkgnilqsnls

MERRKRVEMIMNSrlfreeleriieiQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLEKKEKRWRIGGMEFEALMRMLDNAKIPTGYSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVSTLNPLVLKGNILQSNLS

**************LFREELERIIEIQ******************GLQGQRLQSAHLFRSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYS*******RIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCP********************KRWRIGGMEFEALMRMLDNAKIPTGYSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVSTLNPLVLKGNIL*****

****KRV***MNS**F*EEL***************************************************GV**M*YAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLEKKEKRWRIGGMEFEALMRMLDN************VP************AKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVSTLNPLVLKGNILQS***

******V*MIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSR***********************KRWRIGGMEFEALMRMLDNAKIPTGYSSNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVSTLNPLVLKGNILQ****

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		414	2.2.26 [Sep-21-2011]
Q02645		1156	Protein hu-li tai shao OS	yes	N/A	0.845	0.302	0.544	1e-119
P35611		737	Alpha-adducin OS=Homo sap	yes	N/A	0.799	0.449	0.492	5e-90
Q5RA10		737	Alpha-adducin OS=Pongo ab	yes	N/A	0.799	0.449	0.492	8e-90
Q63028		735	Alpha-adducin OS=Rattus n	yes	N/A	0.799	0.450	0.504	3e-89
Q9QYC0		735	Alpha-adducin OS=Mus musc	no	N/A	0.799	0.450	0.498	2e-88
Q9QYB8		725	Beta-adducin OS=Mus muscu	no	N/A	0.799	0.456	0.412	4e-73
Q05764		725	Beta-adducin OS=Rattus no	no	N/A	0.799	0.456	0.412	4e-73
Q5R5V7		726	Beta-adducin OS=Pongo abe	no	N/A	0.787	0.449	0.409	5e-72
P35612		726	Beta-adducin OS=Homo sapi	no	N/A	0.787	0.449	0.403	1e-71
Q9UEY8		706	Gamma-adducin OS=Homo sap	no	N/A	0.801	0.470	0.408	2e-69

>sp\|Q02645\|HTS_DROME Protein hu-li tai shao OS=Drosophila melanogaster GN=hts PE=1 SV=2	Back alignment and function desciption

 Score =  428 bits (1100), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/397 (54%), Positives = 280/397 (70%), Gaps = 47/397 (11%)

Query: 1   MERRKRVEMIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRS 60
           MERRKRVE IM S+LFREELERI++     G+G++ +LQ +SD++G+   R+ S  +F+S
Sbjct: 37  MERRKRVEAIMGSKLFREELERIVDSARDGGAGASGILQQLSDIVGVPVSRVGS--VFKS 94

Query: 61  SNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIF 120
           SNC+VPINDIRGVESMGYAKGEKILRCK+AA +RL+DLYGWTQ +   ITARL VD+E F
Sbjct: 95  SNCMVPINDIRGVESMGYAKGEKILRCKLAATFRLLDLYGWTQGLGAQITARLKVDQEYF 154

Query: 121 LVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHV 180
           LVNP+GLLY+EITAS+L KVDM+G I+E GTTNFG N + F +H+ +HAARPD++  I++
Sbjct: 155 LVNPYGLLYHEITASALNKVDMQGQIVEQGTTNFGGNKSHFVLHSVVHAARPDIRCAIYI 214

Query: 181 ATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLS 240
               VVA+SSLK GLLPL++++ VLGE++TH +TG    +EE+ R+VR+LGPN+KV+ L+
Sbjct: 215 GCSPVVAISSLKTGLLPLTKDACVLGEITTHAYTGLF-DEEERNRLVRSLGPNSKVILLT 273

Query: 241 NNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEG 300
           N+GA+CCGET+EEAF+   ++V ACE QLKL+P GLDNLVLIPE+ RK IY+ SR  PE 
Sbjct: 274 NHGALCCGETIEEAFFAACHIVQACETQLKLLPVGLDNLVLIPEESRKAIYEQSRRPPED 333

Query: 301 ------------------------AIPAGTNSPTPAVLEKKEKRWRIGGMEFEALMRMLD 336
                                   A+P   + P          +WR+GG EFEALMRMLD
Sbjct: 334 LEKKFAAVAAAEDGAATAEKDAAEAVPKVGSPP----------KWRVGGAEFEALMRMLD 383

Query: 337 NAKIPTGY-------SSNCVVPINDIR---GVESMGY 363
           NA   TGY        S+   P ND+     V S+GY
Sbjct: 384 NAGYRTGYIYRHPLIKSDPPKPKNDVELPPAVSSLGY 420

Required for assembling actin at ring canals in developing egg chambers. Probably interacts with other developmental proteins involved in nurse cell/oocyte transport through the ring canals.
Drosophila melanogaster (taxid: 7227)

>sp\|P35611\|ADDA_HUMAN Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2	Back alignment and function description

>sp\|Q5RA10\|ADDA_PONAB Alpha-adducin OS=Pongo abelii GN=ADD1 PE=2 SV=1	Back alignment and function description

>sp\|Q63028\|ADDA_RAT Alpha-adducin OS=Rattus norvegicus GN=Add1 PE=1 SV=2	Back alignment and function description

>sp\|Q9QYC0\|ADDA_MOUSE Alpha-adducin OS=Mus musculus GN=Add1 PE=1 SV=2	Back alignment and function description

>sp\|Q9QYB8\|ADDB_MOUSE Beta-adducin OS=Mus musculus GN=Add2 PE=1 SV=4	Back alignment and function description

>sp\|Q05764\|ADDB_RAT Beta-adducin OS=Rattus norvegicus GN=Add2 PE=2 SV=4	Back alignment and function description

>sp\|Q5R5V7\|ADDB_PONAB Beta-adducin OS=Pongo abelii GN=ADD2 PE=2 SV=3	Back alignment and function description

>sp\|P35612\|ADDB_HUMAN Beta-adducin OS=Homo sapiens GN=ADD2 PE=1 SV=3	Back alignment and function description

>sp\|Q9UEY8\|ADDG_HUMAN Gamma-adducin OS=Homo sapiens GN=ADD3 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		414
328783679		1438	PREDICTED: hypothetical protein LOC40971	0.821	0.236	0.682	1e-139
380016204		699	PREDICTED: protein hu-li tai shao-like [	0.821	0.486	0.684	1e-138
383866259		1418	PREDICTED: uncharacterized protein LOC10	0.821	0.239	0.691	1e-138
332027695		755	Protein hu-li tai shao [Acromyrmex echin	0.821	0.450	0.679	1e-137
242013985		1931	hypothetical protein Phum_PHUM335260 [Pe	0.852	0.182	0.638	1e-137
307182563		1677	Protein hu-li tai shao [Camponotus flori	0.821	0.202	0.678	1e-137
307208704		1540	Protein hu-li tai shao [Harpegnathos sal	0.826	0.222	0.671	1e-136
345485875		2078	PREDICTED: hypothetical protein LOC10012	0.821	0.163	0.670	1e-135
270002882		1367	hu li tai shao [Tribolium castaneum]	0.814	0.246	0.637	1e-130
189234212		736	PREDICTED: similar to adducin [Tribolium	0.814	0.457	0.637	1e-130

>gi\|328783679\|ref\|XP_393212.3\| PREDICTED: hypothetical protein LOC409713 [Apis mellifera]	Back alignment and taxonomy information

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/346 (68%), Positives = 286/346 (82%), Gaps = 6/346 (1%)

Query: 1   MERRKRVEMIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRS 60
           MERRKRVEM+MNSRLFREELERIIE QMKDG+G + LLQ ISDMMG QG R  + ++F++
Sbjct: 41  MERRKRVEMMMNSRLFREELERIIETQMKDGAGPSGLLQQISDMMGAQGARF-NGNIFKN 99

Query: 61  SNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIF 120
           SNCV+PINDIRGVESMGYAKGEK+LRCK+AAV+RL+DLYGWTQ +   ITARLN D+E F
Sbjct: 100 SNCVLPINDIRGVESMGYAKGEKLLRCKLAAVFRLLDLYGWTQGVGGQITARLNQDQEHF 159

Query: 121 LVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHV 180
           LVNP+GLLY+E+TASSL+KVDM+G I+E GTTNFGV+ A F +H+ IHAARPD+K I+H+
Sbjct: 160 LVNPYGLLYHEVTASSLIKVDMQGTIVEQGTTNFGVHVAGFQLHSTIHAARPDIKCIVHI 219

Query: 181 ATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLS 240
            TP+V A+SSLKCGLLP+ +ES+V+GE+STH + G     EEKE+I RNLGP NK++ L+
Sbjct: 220 TTPSVTAISSLKCGLLPIGQESIVIGEVSTHQYIGGFFEPEEKEKIARNLGPMNKIMLLT 279

Query: 241 NNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRV--CP 298
           N GA+CCGETVEEAF+NVYN+V ACE QLKLMPAGLDNL LI E+ +K I+++SR    P
Sbjct: 280 NRGALCCGETVEEAFFNVYNMVLACETQLKLMPAGLDNLNLISEESKKAIFEASRKPPTP 339

Query: 299 EGAIPAGTNSPTPAVLEKKEKRWRIGGMEFEALMRMLDNAKIPTGY 344
           +  +P    S T A+ EK EKRWRIGG EFEALMRMLDNA   TGY
Sbjct: 340 QQTVPI---SETTALTEKLEKRWRIGGTEFEALMRMLDNAGFRTGY 382

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|380016204\|ref\|XP_003692078.1\| PREDICTED: protein hu-li tai shao-like [Apis florea]	Back alignment and taxonomy information

>gi\|383866259\|ref\|XP_003708588.1\| PREDICTED: uncharacterized protein LOC100878501 [Megachile rotundata]	Back alignment and taxonomy information

>gi\|332027695\|gb\|EGI67763.1\| Protein hu-li tai shao [Acromyrmex echinatior]	Back alignment and taxonomy information

>gi\|242013985\|ref\|XP_002427679.1\| hypothetical protein Phum_PHUM335260 [Pediculus humanus corporis] gi\|212512109\|gb\|EEB14941.1\| hypothetical protein Phum_PHUM335260 [Pediculus humanus corporis]	Back alignment and taxonomy information

>gi\|307182563\|gb\|EFN69756.1\| Protein hu-li tai shao [Camponotus floridanus]	Back alignment and taxonomy information

>gi\|307208704\|gb\|EFN85994.1\| Protein hu-li tai shao [Harpegnathos saltator]	Back alignment and taxonomy information

>gi\|345485875\|ref\|XP_001603856.2\| PREDICTED: hypothetical protein LOC100120196 [Nasonia vitripennis]	Back alignment and taxonomy information

>gi\|270002882\|gb\|EEZ99329.1\| hu li tai shao [Tribolium castaneum]	Back alignment and taxonomy information

>gi\|189234212\|ref\|XP_970946.2\| PREDICTED: similar to adducin [Tribolium castaneum]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		414
FB\|FBgn0263391		1156	hts "hu li tai shao" [Drosophi	0.823	0.294	0.558	2.7e-100
ZFIN\|ZDB-GENE-030909-2		783	add1 "adducin 1 (alpha)" [Dani	0.806	0.426	0.481	3e-78
UNIPROTKB\|F1ND55		732	ADD1 "Uncharacterized protein"	0.809	0.457	0.481	4.8e-78
UNIPROTKB\|A2A3N8		662	ADD1 "Adducin 1 (Alpha), isofo	0.799	0.5	0.478	6.2e-78
UNIPROTKB\|E7ENY0		663	ADD1 "Alpha-adducin" [Homo sap	0.799	0.499	0.478	6.2e-78
UNIPROTKB\|E7EV99		632	ADD1 "Alpha-adducin" [Homo sap	0.799	0.523	0.478	6.2e-78
UNIPROTKB\|P35611		737	ADD1 "Alpha-adducin" [Homo sap	0.799	0.449	0.478	6.2e-78
UNIPROTKB\|Q86XM2		662	ADD1 "Alpha-adducin" [Homo sap	0.799	0.5	0.478	6.2e-78
RGD\|2041		735	Add1 "adducin 1 (alpha)" [Ratt	0.799	0.450	0.487	1.6e-77
UNIPROTKB\|Q63028		735	Add1 "Alpha-adducin" [Rattus n	0.799	0.450	0.487	1.6e-77

FB\|FBgn0263391 hts "hu li tai shao" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

 Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
 Identities = 200/358 (55%), Positives = 259/358 (72%)

Query:     1 MERRKRVEMIMNSXXXXXXXXXXXXXQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRS 60
             MERRKRVE IM S                 G+G++ +LQ +SD++G+   R+ S  +F+S
Sbjct:    37 MERRKRVEAIMGSKLFREELERIVDSARDGGAGASGILQQLSDIVGVPVSRVGS--VFKS 94

Query:    61 SNCVVPINDIRGVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIF 120
             SNC+VPINDIRGVESMGYAKGEKILRCK+AA +RL+DLYGWTQ +   ITARL VD+E F
Sbjct:    95 SNCMVPINDIRGVESMGYAKGEKILRCKLAATFRLLDLYGWTQGLGAQITARLKVDQEYF 154

Query:   121 LVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHV 180
             LVNP+GLLY+EITAS+L KVDM+G I+E GTTNFG N + F +H+ +HAARPD++  I++
Sbjct:   155 LVNPYGLLYHEITASALNKVDMQGQIVEQGTTNFGGNKSHFVLHSVVHAARPDIRCAIYI 214

Query:   181 ATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLS 240
                 VVA+SSLK GLLPL++++ VLGE++TH +TG    +EE+ R+VR+LGPN+KV+ L+
Sbjct:   215 GCSPVVAISSLKTGLLPLTKDACVLGEITTHAYTGLF-DEEERNRLVRSLGPNSKVILLT 273

Query:   241 NNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPE- 299
             N+GA+CCGET+EEAF+   ++V ACE QLKL+P GLDNLVLIPE+ RK IY+ SR  PE 
Sbjct:   274 NHGALCCGETIEEAFFAACHIVQACETQLKLLPVGLDNLVLIPEESRKAIYEQSRRPPED 333

Query:   300 -----GAIPAGTNSPTPAVLEKKEK--------RWRIGGMEFEALMRMLDNAKIPTGY 344
                   A+ A  +    A  +  E         +WR+GG EFEALMRMLDNA   TGY
Sbjct:   334 LEKKFAAVAAAEDGAATAEKDAAEAVPKVGSPPKWRVGGAEFEALMRMLDNAGYRTGY 391

GO:0008302 "female germline ring canal formation, actin assembly" evidence=NAS;IMP;TAS

GO:0045169 "fusome" evidence=NAS;IDA;TAS

GO:0045170 "spectrosome" evidence=IDA;TAS

GO:0045478 "fusome organization" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0048135 "female germ-line cyst formation" evidence=TAS

GO:0007294 "germarium-derived oocyte fate determination" evidence=TAS

GO:0045172 "germline ring canal" evidence=NAS;IDA;TAS

GO:0035183 "female germline ring canal inner rim" evidence=TAS

GO:0003779 "actin binding" evidence=ISS

GO:0048134 "germ-line cyst formation" evidence=TAS

GO:0030721 "spectrosome organization" evidence=TAS

GO:0046872 "metal ion binding" evidence=IEA

GO:0007282 "cystoblast division" evidence=IMP

GO:0030723 "ovarian fusome organization" evidence=IMP

GO:0051297 "centrosome organization" evidence=IMP

GO:0030724 "testicular fusome organization" evidence=IMP

GO:0000212 "meiotic spindle organization" evidence=IMP

GO:0005811 "lipid particle" evidence=IDA

GO:0045214 "sarcomere organization" evidence=IMP

GO:0007527 "adult somatic muscle development" evidence=IMP

GO:0072499 "photoreceptor cell axon guidance" evidence=IGI;IMP;IPI

GO:0007411 "axon guidance" evidence=IMP

ZFIN\|ZDB-GENE-030909-2 add1 "adducin 1 (alpha)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1ND55 ADD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|A2A3N8 ADD1 "Adducin 1 (Alpha), isoform CRA_e" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E7ENY0 ADD1 "Alpha-adducin" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E7EV99 ADD1 "Alpha-adducin" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|P35611 ADD1 "Alpha-adducin" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q86XM2 ADD1 "Alpha-adducin" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

RGD\|2041 Add1 "adducin 1 (alpha)" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q63028 Add1 "Alpha-adducin" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q63028	ADDA_RAT	No assigned EC number	0.5042	0.7995	0.4503	yes	N/A
Q02645	HTS_DROME	No assigned EC number	0.5440	0.8454	0.3027	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		414
PRK07044		252	PRK07044, PRK07044, aldolase II superfamily protei	7e-74
pfam00596		181	pfam00596, Aldolase_II, Class II Aldolase and Addu	3e-52
cd00398		209	cd00398, Aldolase_II, Class II Aldolase and Adduci	5e-49
smart01007		185	smart01007, Aldolase_II, Class II Aldolase and Add	5e-45
COG0235		219	COG0235, AraD, Ribulose-5-phosphate 4-epimerase an	2e-36
PRK06661		231	PRK06661, PRK06661, hypothetical protein; Provisio	3e-36
PRK06208		274	PRK06208, PRK06208, hypothetical protein; Provisio	1e-32
PRK06486		262	PRK06486, PRK06486, hypothetical protein; Provisio	3e-28
PRK07490		245	PRK07490, PRK07490, hypothetical protein; Provisio	3e-18
PRK07090		260	PRK07090, PRK07090, class II aldolase/adducin doma	2e-13
PRK08130		213	PRK08130, PRK08130, putative aldolase; Validated	7e-10
PRK06557		221	PRK06557, PRK06557, L-ribulose-5-phosphate 4-epime	4e-07
PRK08333		184	PRK08333, PRK08333, L-fuculose phosphate aldolase;	5e-07
PRK07044		252	PRK07044, PRK07044, aldolase II superfamily protei	1e-04
TIGR01086		214	TIGR01086, fucA, L-fuculose phosphate aldolase	2e-04
PRK08087		215	PRK08087, PRK08087, L-fuculose phosphate aldolase;	3e-04
PRK08193		231	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase	9e-04
PRK06833		214	PRK06833, PRK06833, L-fuculose phosphate aldolase;	0.001
PRK13145		234	PRK13145, araD, L-ribulose-5-phosphate 4-epimerase	0.002
TIGR03328		193	TIGR03328, salvage_mtnB, methylthioribulose-1-phos	0.003

>gnl\|CDD\|235916 PRK07044, PRK07044, aldolase II superfamily protein; Provisional	Back alignment and domain information

 Score =  230 bits (590), Expect = 7e-74
 Identities = 100/261 (38%), Positives = 146/261 (55%), Gaps = 28/261 (10%)

Query: 85  LRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRG 144
            R  +AA YRL+ L GW   I  HI+AR+  +E  FL+NP+GLL++EITAS+LVK+D+ G
Sbjct: 17  ARVDLAAAYRLVALLGWDDLIYTHISARVPGEEHHFLINPYGLLFDEITASNLVKIDLDG 76

Query: 145 DIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV- 203
           ++++   + + VN A F++H+AIHAARPD   ++H  T A VAVS+ + GLLPLS+ ++ 
Sbjct: 77  NVVDD--SPYPVNPAGFTIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGLLPLSQHALQ 134

Query: 204 VLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVA 263
             G L+ H + G +   +E ER+V +LG     + L N+G +  G TV EAF  +Y L  
Sbjct: 135 FYGRLAYHDYEGIALDLDEGERLVADLGDKP-AMLLRNHGLLTVGRTVAEAFLLMYTLER 193

Query: 264 ACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLEKKEKRWRI 323
           ACE Q+     G + LVL P +V +     S   P                         
Sbjct: 194 ACEIQVAAQAGGGE-LVLPPPEVAERTARQSLFDPGAGA--------------------- 231

Query: 324 GGMEFEALMRMLDNAKIPTGY 344
           G + + AL+R LD  +I  GY
Sbjct: 232 GELAWPALLRKLD--RIDPGY 250

Length = 252

>gnl\|CDD\|216015 pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	Back alignment and domain information

>gnl\|CDD\|238232 cd00398, Aldolase_II, Class II Aldolase and Adducin head (N-terminal) domain	Back alignment and domain information

>gnl\|CDD\|214970 smart01007, Aldolase_II, Class II Aldolase and Adducin N-terminal domain	Back alignment and domain information

>gnl\|CDD\|223313 COG0235, AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|168637 PRK06661, PRK06661, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|235743 PRK06208, PRK06208, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|235814 PRK06486, PRK06486, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|236031 PRK07490, PRK07490, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|180832 PRK07090, PRK07090, class II aldolase/adducin domain protein; Provisional	Back alignment and domain information

>gnl\|CDD\|181241 PRK08130, PRK08130, putative aldolase; Validated	Back alignment and domain information

>gnl\|CDD\|235829 PRK06557, PRK06557, L-ribulose-5-phosphate 4-epimerase; Validated	Back alignment and domain information

>gnl\|CDD\|181393 PRK08333, PRK08333, L-fuculose phosphate aldolase; Provisional	Back alignment and domain information

>gnl\|CDD\|235916 PRK07044, PRK07044, aldolase II superfamily protein; Provisional	Back alignment and domain information

>gnl\|CDD\|188107 TIGR01086, fucA, L-fuculose phosphate aldolase	Back alignment and domain information

>gnl\|CDD\|181226 PRK08087, PRK08087, L-fuculose phosphate aldolase; Provisional	Back alignment and domain information

>gnl\|CDD\|236181 PRK08193, araD, L-ribulose-5-phosphate 4-epimerase; Reviewed	Back alignment and domain information

>gnl\|CDD\|180717 PRK06833, PRK06833, L-fuculose phosphate aldolase; Provisional	Back alignment and domain information

>gnl\|CDD\|183870 PRK13145, araD, L-ribulose-5-phosphate 4-epimerase; Provisional	Back alignment and domain information

>gnl\|CDD\|234168 TIGR03328, salvage_mtnB, methylthioribulose-1-phosphate dehydratase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		414
KOG3699\|consensus		598		100.0
PRK07044		252	aldolase II superfamily protein; Provisional	100.0
PRK06486		262	hypothetical protein; Provisional	100.0
PRK07490		245	hypothetical protein; Provisional	100.0
PRK06661		231	hypothetical protein; Provisional	100.0
PRK06208		274	hypothetical protein; Provisional	100.0
PRK07090		260	class II aldolase/adducin domain protein; Provisio	100.0
PRK06833		214	L-fuculose phosphate aldolase; Provisional	100.0
PRK08087		215	L-fuculose phosphate aldolase; Provisional	100.0
PRK08130		213	putative aldolase; Validated	100.0
PRK12348		228	sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed	100.0
PRK05874		217	L-fuculose-phosphate aldolase; Validated	100.0
PRK06557		221	L-ribulose-5-phosphate 4-epimerase; Validated	100.0
cd00398		209	Aldolase_II Class II Aldolase and Adducin head (N-	100.0
TIGR00760		231	araD L-ribulose-5-phosphate 4-epimerase. The homol	100.0
PRK08193		231	araD L-ribulose-5-phosphate 4-epimerase; Reviewed	100.0
PRK13145		234	araD L-ribulose-5-phosphate 4-epimerase; Provision	100.0
PRK12347		231	sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed	100.0
TIGR01086		214	fucA L-fuculose phosphate aldolase. Members of thi	100.0
PRK05834		194	hypothetical protein; Provisional	100.0
PF00596		184	Aldolase_II: Class II Aldolase and Adducin N-termi	100.0
COG0235		219	AraD Ribulose-5-phosphate 4-epimerase and related	100.0
PRK08333		184	L-fuculose phosphate aldolase; Provisional	100.0
PRK06357		216	hypothetical protein; Provisional	100.0
PRK08660		181	L-fuculose phosphate aldolase; Provisional	100.0
PRK13213		231	araD L-ribulose-5-phosphate 4-epimerase; Reviewed	100.0
PRK03634		274	rhamnulose-1-phosphate aldolase; Provisional	100.0
PRK06754		208	mtnB methylthioribulose-1-phosphate dehydratase; R	100.0
PRK09220		204	methylthioribulose-1-phosphate dehydratase; Provis	100.0
TIGR02624		270	rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Mem	100.0
PRK06755		209	hypothetical protein; Validated	100.0
TIGR03328		193	salvage_mtnB methylthioribulose-1-phosphate dehydr	100.0
PRK08324		681	short chain dehydrogenase; Validated	99.95
TIGR02632		676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.9
KOG2631\|consensus		238		99.83
KOG3699\|consensus		598		99.78
COG3347		404	Uncharacterized conserved protein [Function unknow	99.42
PRK07090		260	class II aldolase/adducin domain protein; Provisio	97.72
PRK06486		262	hypothetical protein; Provisional	97.5
PRK07044		252	aldolase II superfamily protein; Provisional	97.34
PRK06208		274	hypothetical protein; Provisional	96.06
PRK08324		681	short chain dehydrogenase; Validated	89.08

>KOG3699\|consensus	Back alignment and domain information

Probab=100.00  E-value=4.6e-71  Score=569.20  Aligned_cols=307  Identities=50%  Similarity=0.767  Sum_probs=276.2

Q ss_pred             CccccchhhhccChhhHHHHHHHHHHHHHcCCCCchhhHHHhhhhccccccccccccccCCCcccCCCCCCCCccCCCCh
Q psy14071          1 MERRKRVEMIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRSSNCVVPINDIRGVESMGYAK   80 (414)
Q Consensus         1 me~~krv~~il~s~~f~~ele~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pi~d~~g~e~~~~~~   80 (414)
                      |||||||+||||||+||||||++||+           ||||                                       
T Consensus        42 me~rkrv~~Ilqs~~F~~ELe~~i~~-----------L~~i---------------------------------------   71 (598)
T KOG3699|consen   42 MEQRKRVTMILQSPSFREELENLIQE-----------LQQI---------------------------------------   71 (598)
T ss_pred             HHHhHHHHHHhcChhhhHHHHhhhHH-----------HHHH---------------------------------------
Confidence            99999999999999999999999999           6777                                       


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCch
Q psy14071         81 GEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTAT  160 (414)
Q Consensus        81 ~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e  160 (414)
                         .+||+||++||++|                          |  +.|+|+|+|.|+|||+.|++++.|++++++|.++
T Consensus        72 ---~~rckla~~~rl~D--------------------------p--~~~he~tas~l~kv~~~g~iv~qgs~~~~vn~sg  120 (598)
T KOG3699|consen   72 ---LTRCKLAAVYRLAD--------------------------P--LLYHEITASSLVKVNIQGEIVDQGSTNLGVNQSG  120 (598)
T ss_pred             ---HhhhhHHHhhhhcC--------------------------c--hhhhhcccccceeecccchhhhcccccccccccc
Confidence               57999999999998                          5  8999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhCCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEec
Q psy14071        161 FSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLS  240 (414)
Q Consensus       161 ~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLr  240 (414)
                      |.+|++||++|||||||||.|++...|+|.++|||+|++|+++.+|+|.||+|+|+..++++...+++.||++ ++++||
T Consensus       121 f~lhsai~~a~p~vrc~ihi~t~~~aavs~mk~gllp~s~~a~~lg~~~~~dy~~~~e~~~~~~~~~~~lg~~-kvl~lr  199 (598)
T KOG3699|consen  121 FFLHSAIYAARPDVRCIIHIHTSAVAAVSSMKCGLLPLSQEALVLGEVAYYDYQGILEDEEERIPLQKNLGPK-KVLVLR  199 (598)
T ss_pred             cchhhhhhccCCceeEEEEeccchHHHHHHhhhcccccccccccccceeeeecccccccchhhhhHHhhcCcc-ceEEEe
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999996 999999


Q ss_pred             CCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhhHhhhhh
Q psy14071        241 NNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLEKKEKR  320 (414)
Q Consensus       241 NHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (414)
                      |||++++|+|++|||+++.++..|||+|+.+.+.|.+|++.++++++++.......                    +..+
T Consensus       200 N~g~~~~g~t~eeA~~~~~~~~~ace~qv~~~a~g~dnl~~~~~~~~~~~~~~~~~--------------------~~~~  259 (598)
T KOG3699|consen  200 NHGVVSVGETVEEAFYYIFNLVLACEIQVSASAGGLDNLILLEEEKYKAINRFSVP--------------------SPPK  259 (598)
T ss_pred             cccccccchhHHHHHHHhhcchhhhhhhhhhcccCccccccCcHhhhhhhhccccC--------------------Cccc
Confidence            99999999999999999999999999999988889999999999999877653211                    3468


Q ss_pred             hccchhhHHHHHHhhhhcCCCCCCCCCcc------cccCCcc-c--ccccccccc-------------------------
Q psy14071        321 WRIGGMEFEALMRMLDNAKIPTGYSSNCV------VPINDIR-G--VESMGYAKG-------------------------  366 (414)
Q Consensus       321 w~~g~~~feal~R~ld~~g~rTgy~~~~~------~~~nDve-~--~~~~~~s~~-------------------------  366 (414)
                      |+.|++|||||||||||+||||||.||+|      ..++||+ +  ++.+.+..+                         
T Consensus       260 ~r~ge~efe~lmr~ldn~~~rtg~~yR~p~~~~k~~~~sdV~~P~~v~~~~~~~d~~~v~~~r~~~~~~~~e~tRwlNsp  339 (598)
T KOG3699|consen  260 WRVGEQEFEALMRMLDNLGYRTGYNYRHPALREKPSKKSDVEIPATVTAFGFATDGAPVSPLRQAPQKQQREKTRWLNLP  339 (598)
T ss_pred             cccchHHHHHHHHHHhhccccccccccchhhcccCCCccceecchhhhhhhhhccCCcCChhhhccchhhhhhhhhcCCc
Confidence            99999999999999999999999999994      5678998 3  332222211                         


Q ss_pred             ---------chhhhhhHHHHHHHHhhhCccccccceEEEe----------eecCcccC-cccccC
Q psy14071        367 ---------EKILRCKVAAVYRLMDLYGWTQNIQNHITVS----------TLNPLVLK-GNILQS  411 (414)
Q Consensus       367 ---------E~~~R~~LAa~yrl~~~~gw~~~i~~his~r----------l~n~~g~~-~~~~~~  411 (414)
                               |...|..+|++|  ..+++|.+.+++|+++|          ++||++.. .++++|
T Consensus       340 n~~~~~~~~e~~~~npka~t~--w~~~~~ne~s~~~~pVrIedP~qfvp~~~NP~Evle~rnkIr  402 (598)
T KOG3699|consen  340 NKVDEVDEEERGMRNPKAKTT--WVKEDWNEGSASHTPVRIEDPNQFVPLLINPKEVLEMRNKIR  402 (598)
T ss_pred             cccccccHHhhccCCccccee--eeeccccccccCCceeeccCCCCccccccCHHHHHHHHhhHH
Confidence                     122445688888  77899999999999999          59999987 555554

>PRK07044 aldolase II superfamily protein; Provisional	Back alignment and domain information

>PRK06486 hypothetical protein; Provisional	Back alignment and domain information

>PRK07490 hypothetical protein; Provisional	Back alignment and domain information

>PRK06661 hypothetical protein; Provisional	Back alignment and domain information

>PRK06208 hypothetical protein; Provisional	Back alignment and domain information

>PRK07090 class II aldolase/adducin domain protein; Provisional	Back alignment and domain information

>PRK06833 L-fuculose phosphate aldolase; Provisional	Back alignment and domain information

>PRK08087 L-fuculose phosphate aldolase; Provisional	Back alignment and domain information

>PRK08130 putative aldolase; Validated	Back alignment and domain information

>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed	Back alignment and domain information

>PRK05874 L-fuculose-phosphate aldolase; Validated	Back alignment and domain information

>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated	Back alignment and domain information

>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain	Back alignment and domain information

>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase	Back alignment and domain information

>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed	Back alignment and domain information

>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional	Back alignment and domain information

>PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed	Back alignment and domain information

>TIGR01086 fucA L-fuculose phosphate aldolase	Back alignment and domain information

>PRK05834 hypothetical protein; Provisional	Back alignment and domain information

>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus	Back alignment and domain information

>COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK08333 L-fuculose phosphate aldolase; Provisional	Back alignment and domain information

>PRK06357 hypothetical protein; Provisional	Back alignment and domain information

>PRK08660 L-fuculose phosphate aldolase; Provisional	Back alignment and domain information

>PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed	Back alignment and domain information

>PRK03634 rhamnulose-1-phosphate aldolase; Provisional	Back alignment and domain information

>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed	Back alignment and domain information

>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional	Back alignment and domain information

>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase	Back alignment and domain information

>PRK06755 hypothetical protein; Validated	Back alignment and domain information

>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase	Back alignment and domain information

>PRK08324 short chain dehydrogenase; Validated	Back alignment and domain information

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase	Back alignment and domain information

>KOG2631\|consensus	Back alignment and domain information

>KOG3699\|consensus	Back alignment and domain information

>COG3347 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK07090 class II aldolase/adducin domain protein; Provisional	Back alignment and domain information

>PRK06486 hypothetical protein; Provisional	Back alignment and domain information

>PRK07044 aldolase II superfamily protein; Provisional	Back alignment and domain information

>PRK06208 hypothetical protein; Provisional	Back alignment and domain information

>PRK08324 short chain dehydrogenase; Validated	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		414
3ocr_A		273	Crystal Structure Of Aldolase Ii Superfamily Protei		4e-35
2z7b_A		270	Crystal Structure Of Mesorhizobium Loti 3-Hydroxy-2		3e-04

>pdb|3OCR|A Chain A, Crystal Structure Of Aldolase Ii Superfamily Protein From Pseudomonas Syringae Length = 273

Back alignment and structure

Iteration: 1

Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 3/205 (1%) Query: 101 WTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTAT 160 WT +I H +AR+ +E FL+N GLL++EITAS+LVKVD+ G I++ T G+N A Sbjct: 50 WTDHIYTHFSARVPGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDD-PTGLGINYAG 108 Query: 161 FSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVL-GELSTHPFTGYSRG 219 + +H+AIHAAR DL+A++H T +AVS+ K GLLP+S+ S+ G ++ H + G + Sbjct: 109 YVIHSAIHAARHDLQAVLHTHTRDGIAVSAQKDGLLPISQHSIAFSGRVAYHGYEGIALD 168 Query: 220 DEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNL 279 E+ER+V +LG + V L N+G + G +VE A ++ L AC Q+ AG L Sbjct: 169 LSERERLVADLG-DKSVXILRNHGLLTGGVSVEHAIQQLHALEYACNIQIAAQSAGNAEL 227 Query: 280 VLIPEDVRKEIYDSSRVCPEGAIPA 304 V P +V ++ + ++ +G P Sbjct: 228 VFPPREVIAKVEEQAKAIKDGNGPG 252

PyMOL of 3ocr

>pdb|2Z7B|A Chain A, Crystal Structure Of Mesorhizobium Loti 3-Hydroxy-2-Methylpyridine-4, 5-Dicarboxylate Decarboxylase Length = 270

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		414
3ocr_A		273	Class II aldolase/adducin domain protein; PSI-2, m	1e-102
3ocr_A		273	Class II aldolase/adducin domain protein; PSI-2, m	5e-09
2z7b_A		270	MLR6791 protein; class II aldolase superfamily, ly	6e-65
1e4c_P		215	L-fuculose 1-phosphate aldolase; aldolase (class I	7e-33
1pvt_A		238	Sugar-phosphate aldolase; structural genomics, PSI	3e-25
2opi_A		212	L-fuculose-1-phosphate aldolase; L-fuculose-1-phos	4e-20
2fk5_A		200	Fuculose-1-phosphate aldolase; class II aldolase,	1e-19
1k0w_A		231	L-ribulose 5 phosphate 4-epimerase; aldolase, isom	9e-19
2v9l_A		274	Rhamnulose-1-phosphate aldolase; entropy index, me	1e-16
2irp_A		208	Putative aldolase class 2 protein AQ_1979; aldehyd	1e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-10
3m4r_A		222	Uncharacterized protein; short chain dehydrogenase	7e-07

>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} Length = 273	Back alignment and structure

 Score =  303 bits (777), Expect = e-102
 Identities = 92/260 (35%), Positives = 141/260 (54%), Gaps = 22/260 (8%)

Query: 78  YAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSL 137
            +  E  +R K+AA YRL  L  WT +I  H +AR+   +E FL+N  GLL++EITAS+L
Sbjct: 27  VSPQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARVPGPDEHFLINAFGLLFDEITASNL 86

Query: 138 VKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLP 197
           VKVD+ G I++   T  G+N A + +H+AIHAAR DL+A++H  T   +AVS+ K GLLP
Sbjct: 87  VKVDIDGTIVD-DPTGLGINYAGYVIHSAIHAARHDLQAVLHTHTRDGIAVSAQKDGLLP 145

Query: 198 LSRES-VVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFY 256
           +S+ S    G ++ H + G +    E+ER+V +LG    V+ L N+G +  G +VE A  
Sbjct: 146 ISQHSIAFSGRVAYHGYEGIALDLSERERLVADLGD-KSVMILRNHGLLTGGVSVEHAIQ 204

Query: 257 NVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLEK 316
            ++ L  AC  Q+    AG   LV  P +V  ++ + ++   +G                
Sbjct: 205 QLHALEYACNIQIAAQSAGNAELVFPPREVIAKVEEQAKAIKDG---------------- 248

Query: 317 KEKRWRIGGMEFEALMRMLD 336
                      + AL+R L+
Sbjct: 249 ---NGPGVARHWNALIRELE 265

PyMOL of 3ocr

>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} Length = 273	Back alignment and structure

>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti} Length = 270	Back alignment and structure

>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P Length = 215	Back alignment and structure

>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1 Length = 238	Back alignment and structure

>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron} Length = 212	Back alignment and structure

>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A Length = 200	Back alignment and structure

>1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A Length = 231	Back alignment and structure

>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A Length = 274	Back alignment and structure

>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus} Length = 208	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum} Length = 222	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		414
3ocr_A		273	Class II aldolase/adducin domain protein; PSI-2, m	100.0
2z7b_A		270	MLR6791 protein; class II aldolase superfamily, ly	100.0
1e4c_P		215	L-fuculose 1-phosphate aldolase; aldolase (class I	100.0
2opi_A		212	L-fuculose-1-phosphate aldolase; L-fuculose-1-phos	100.0
1k0w_A		231	L-ribulose 5 phosphate 4-epimerase; aldolase, isom	100.0
2fk5_A		200	Fuculose-1-phosphate aldolase; class II aldolase,	100.0
2irp_A		208	Putative aldolase class 2 protein AQ_1979; aldehyd	100.0
2v9l_A		274	Rhamnulose-1-phosphate aldolase; entropy index, me	100.0
1pvt_A		238	Sugar-phosphate aldolase; structural genomics, PSI	100.0
3m4r_A		222	Uncharacterized protein; short chain dehydrogenase	100.0
3ocr_A		273	Class II aldolase/adducin domain protein; PSI-2, m	98.7
2z7b_A		270	MLR6791 protein; class II aldolase superfamily, ly	97.24
3m4r_A		222	Uncharacterized protein; short chain dehydrogenase	85.43

>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}	Back alignment and structure

Probab=100.00  E-value=2.2e-58  Score=449.65  Aligned_cols=242  Identities=39%  Similarity=0.618  Sum_probs=220.7

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCC
Q psy14071         77 GYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGV  156 (414)
Q Consensus        77 ~~~~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~  156 (414)
                      .++++||++|++|+++||+++++||+++++||||+|+++++++|||||+|+.|++++++||++||++|+++++. +++.+
T Consensus        26 ~~~~~e~~~R~~la~~~r~l~~~G~~~~~~GNiS~R~~~~~~~flItPsG~~~~~lt~~dlv~vdldG~~v~g~-~~~~~  104 (273)
T 3ocr_A           26 RVSPQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARVPGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDDP-TGLGI  104 (273)
T ss_dssp             HSCHHHHHHHHHHHHHHHHHHHTTCCBTTBCCEEEECSSSSCEEEECCTTCCGGGCCGGGCEEEETTCCEEECT-TSCCC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHCCCccCCCcEEEEEecCCCCEEEEeCCCCChhhCCccCEEEEeCCCCCccCC-CCCCC
Confidence            48899999999999999999999999999999999999877899999999999999999999999999999873 23468


Q ss_pred             CCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeeecCCCCCCcHHHHHHHHHHhCCCCc
Q psy14071        157 NTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTHPFTGYSRGDEEKERIVRNLGPNNK  235 (414)
Q Consensus       157 ~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~  235 (414)
                      ||+||.||++||++|||++||+|+||++++|+|+++++++|++++++ ++|+|+|+||.+++.+.+++++++++|++ ++
T Consensus       105 psse~~iH~~Iy~~rpdv~aVvHtHs~~a~a~s~~~~~l~p~~~~~~~~~g~v~~~~y~~~~~~~el~~~i~~~l~~-~~  183 (273)
T 3ocr_A          105 NYAGYVIHSAIHAARHDLQAVLHTHTRDGIAVSAQKDGLLPISQHSIAFSGRVAYHGYEGIALDLSERERLVADLGD-KS  183 (273)
T ss_dssp             CTTTTHHHHHHHHHCTTCCEEEEECCHHHHHHHTSTTCSCSCSHHHHTTTTTEEEECCCCSSCCHHHHHHHHHHHTT-CS
T ss_pred             CChHHHHHHHHHHhCCCCcEEEEcCChHHHHHHHccCCCCCccHHHHHhCCCEEEECCCCCCCCHHHHHHHHHHhCc-CC
Confidence            99999999999999999999999999999999999999999999987 77999999999998788999999999996 79


Q ss_pred             EEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhhH
Q psy14071        236 VLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLE  315 (414)
Q Consensus       236 vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (414)
                      ++||+|||+++||+|+++||.+++.||++|++|+.|+++|..++..||+++++++++++.....                
T Consensus       184 avlL~nHG~~~~G~tl~eA~~~~~~lE~~a~i~l~a~~~G~~~~~~l~~~~~~~~~~~~~~~~~----------------  247 (273)
T 3ocr_A          184 VMILRNHGLLTGGVSVEHAIQQLHALEYACNIQIAAQSAGNAELVFPPREVIAKVEEQAKAIKD----------------  247 (273)
T ss_dssp             EEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHGGGCGGGCCCCCHHHHHHHHHHHHCC------------------
T ss_pred             EEEEcCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcccc----------------
Confidence            9999999999999999999999999999999999999998335889999999999988743211                


Q ss_pred             hhhhhhccc---hhhHHHHHHhhhhcCCCCCC
Q psy14071        316 KKEKRWRIG---GMEFEALMRMLDNAKIPTGY  344 (414)
Q Consensus       316 ~~~~~w~~g---~~~feal~R~ld~~g~rTgy  344 (414)
                            ..|   +++|+||+|+||+.+  ++|
T Consensus       248 ------~~~~~~~~~w~a~~r~l~~~~--p~~  271 (273)
T 3ocr_A          248 ------GNGPGVARHWNALIRELERSG--TDY  271 (273)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTC--SGG
T ss_pred             ------cccchhhhhHHHHHHHHhccC--CCc
Confidence                  123   689999999999986  454

PyMOL of 3ocr

>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}	Back alignment and structure

>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P	Back alignment and structure

>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}	Back alignment and structure

>1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A	Back alignment and structure

>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A	Back alignment and structure

>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}	Back alignment and structure

>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A	Back alignment and structure

>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1	Back alignment and structure

>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}	Back alignment and structure

>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}	Back alignment and structure

>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}	Back alignment and structure

>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		414
d1pvta_		232	c.74.1.1 (A:) Putative sugar-phosphate aldolase {T	2e-29
d1e4cp_		206	c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Esc	3e-27
d1ojra_		274	c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {E	1e-22
d1k0wa_		223	c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {	9e-22

>d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]} Length = 232	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: Putative sugar-phosphate aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score =  111 bits (279), Expect = 2e-29
 Identities = 36/222 (16%), Positives = 69/222 (31%), Gaps = 31/222 (13%)

Query: 85  LRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEE-------------------IFLVNPH 125
              ++  V   + + G ++    +I+ RL+   E                     L+   
Sbjct: 6   TIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLITAT 65

Query: 126 GLLYNEITASSLVKVDMR------GDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIH 179
           G    E+         +        +I+               +HA      P+ KAI+H
Sbjct: 66  GSRMREVYEDDSKICLLHVLPGKHYEILHGNGKPTSEFPTHLMIHAKFKEMNPEKKAIVH 125

Query: 180 VATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERI------VRNLGPN 233
                ++ + +L+     L +   +  E+      G S  + EK                
Sbjct: 126 THPLNLLTLMNLEEFQELLPKMMKIHPEVLIFFPQGISVVEFEKPGSVELGLKTVEKSEG 185

Query: 234 NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAG 275
              +    +G V  G+ V EA+  V  L  A E  L+++  G
Sbjct: 186 KDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRVLSLG 227

PyMOL of d1pvta_

>d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Length = 206	Back information, alignment and structure

>d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Length = 274	Back information, alignment and structure

>d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]} Length = 223	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		414
d1e4cp_		206	L-fuculose-1-phosphate aldolase {Escherichia coli	100.0
d1ojra_		274	L-rhamnulose-1-phosphate aldolase {Escherichia col	100.0
d1pvta_		232	Putative sugar-phosphate aldolase {Thermotoga mari	100.0
d1k0wa_		223	L-ribulose-5-phosphate 4-epimerase {Escherichia co	100.0

>d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: L-fuculose-1-phosphate aldolase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9e-46  Score=343.00  Aligned_cols=202  Identities=19%  Similarity=0.312  Sum_probs=185.4

Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchH
Q psy14071         82 EKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATF  161 (414)
Q Consensus        82 e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~  161 (414)
                      ++++|++|+.++|.++++||+++++||||+|++   |.|||||+|..+++++++||++||.+|+++++.     .|++++
T Consensus         3 ~~~l~~~l~~~~r~l~~~Gl~~g~~GniS~R~~---d~~lIt~sG~~~~~l~~~dlv~v~~~g~~~~g~-----~ps~e~   74 (206)
T d1e4cp_           3 RNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQ---DGMLITPTGIPYEKLTESHIVFIDGNGKHEEGK-----LPQSEW   74 (206)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCTTCCEEEEEET---TEEEECCTTCCGGGCCGGGCEEECTTCCBCTTC-----CCCTTH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEeC---CcEEEeCCCCChhhCCHHhcccccccccccccc-----ccchhH
Confidence            567999999999999999999999999999996   689999999999999999999999999988763     589999


Q ss_pred             HHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhC-CeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEe
Q psy14071        162 SVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLG-ELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFL  239 (414)
Q Consensus       162 ~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g-~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllL  239 (414)
                      .+|..||++|||++||+|+|+++++|+|+.+.+++|..+... +++ .+++.+|..++. .++++.++++|++ ++++||
T Consensus        75 ~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~-~~~~~~~~~~l~~-~~~~ll  152 (206)
T d1e4cp_          75 RFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGGNSIPCAPYATFGT-RELSEHVALALKN-RKATLL  152 (206)
T ss_dssp             HHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCCBCSSSGGGGGGTSSCBCEECCCCTTC-HHHHHHHHHHTSS-CSEEEE
T ss_pred             HHHHHHHHhccCcceEEEecCcceeeehhhcCCCCchhHHHHHHcCCceeecCCcCCcc-hhHHHHHHHHHhc-CCceee
Confidence            999999999999999999999999999999999988877665 554 689999998875 6899999999997 699999


Q ss_pred             cCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071        240 SNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS  294 (414)
Q Consensus       240 rNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~  294 (414)
                      +|||+++||+|+++||++++.+|++|++|+.|+++|. +...||+|+++++.+.|
T Consensus       153 ~nHG~~~~G~s~~eA~~~~~~lE~~a~~~l~a~~~G~-~~~~l~~ee~~~~~~~f  206 (206)
T d1e4cp_         153 QHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITD-PVPVLSDEEIAVVLEKF  206 (206)
T ss_dssp             TTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCS-SCCCCCHHHHHHHHHHC
T ss_pred             cCcccEEEcCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHhhC
Confidence            9999999999999999999999999999999999996 46678999998887653

PyMOL of d1e4cp_

>d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure