Psyllid ID: psy14121

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLWRNLHHHFRVPGKKTFNLILGRLGLGQSFYGNRQSTQRHRSEYNSPSLIPFYYYCNNKGRTD
Secondary Structure (PSIPRED)
cccccccEEEEEEHHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHEEHHHHcccccccccccHHHHHHccccccccEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEcHHHHHcccccEEEEEccccccEEEEccccHEEEEEHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccccccccccccccccEEEEEEccccccc
Coil and Loop (DISEMBL)
mggcddgiiqmynvdnimsgdnkvdilskkhsgpvraldfnkFQVVATNFKIRAHLWRNLhhhfrvpgkktFNLILGRlglgqsfygnrqstqrhrseynspslipfyyycnnkgrtd
Flexible Loop (DISEMBL)
MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLWRNLHHHFRVPGKKTFNLILGRLGLGQSFYGNrqstqrhrseynspslipfyyycnnkgrtd
Low Complexity Region (SEG)
MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLWRNLHHHFRVPGKKTFNLILGRLGLGQSFYGNRQSTQRHRSEYNSPSLIPFYYYCNNKGRTD
Disordered region (IsUnstruct)
*****DGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLWRNLHHHFRVPGKKTFNLILGRLGLGQSFYG***************SLIPFYYYCN******
Disordered Region (DISOPRED)
*GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLWRNLHHHFRVPGKKTFNLILGRLGLGQSFY*****************LIPFYYYCNNK****
Disordered Region (DISEMBL)
MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLWRNLHHHFRVPGKKTFNLILGRLGLGQSFYGN*********EYNSPSLIPFYYYCNNKGRTD
Disordered Region (DISPRO)
**GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLWRNLHHHFRVPGKKTFNLILGRLGLGQSFYGN**********YNSPSLIPFYYYCNNK****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLWRNLHHHFRVPGKKTFNLILGRLGLGQSFYGNRQSTQRHRSEYNSPSLIPFYYYCNNKGRTD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	118	2.2.26 [Sep-21-2011]
Q3TZ89	1158	Protein transport protein	yes	N/A	0.364	0.037	0.5	5e-05
Q9NQW1	1179	Protein transport protein	yes	N/A	0.372	0.037	0.488	0.0001
Q9Z2Q1	1249	Protein transport protein	no	N/A	0.372	0.035	0.488	0.0002
Q3UPL0	1230	Protein transport protein	no	N/A	0.372	0.035	0.488	0.0002
Q5F3X8	1227	Protein transport protein	no	N/A	0.372	0.035	0.466	0.0003
Q7SYD5	1254	Protein transport protein	no	N/A	0.601	0.056	0.368	0.0004
Q5R4F4	1106	Protein transport protein	no	N/A	0.372	0.039	0.466	0.0007
O94979	1220	Protein transport protein	no	N/A	0.372	0.036	0.466	0.0007

>sp|Q3TZ89|SC31B_MOUSE Protein transport protein Sec31B OS=Mus musculus GN=Sec31b PE=1 SV=2

 Score = 46.2 bits (108), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)

Query: 2   GGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
           GG D+G + +YNV +++S   +  I  K KH+G VRALDFN FQ
Sbjct: 90  GGGDNGTLTLYNVTHVLSSGKEPLIAQKQKHTGAVRALDFNPFQ 133

As a component of the coat protein complex II (COPII), may function in vesicle budding and cargo export from the endoplasmic reticulum.
Mus musculus (taxid: 10090)

>sp|Q9NQW1|SC31B_HUMAN Protein transport protein Sec31B OS=Homo sapiens GN=SEC31B PE=1 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMS-GDNKVDILSKKHSGPVRALDFNKFQ 44
           +GG D+G++ +YNV +I+S G   V    +KH+G VRALD N FQ
Sbjct: 89  VGGGDNGMLILYNVTHILSSGKEPVIAQKQKHTGAVRALDLNPFQ 133

As a component of the coat protein complex II (COPII), may function in vesicle budding and cargo export from the endoplasmic reticulum.

Homo sapiens (taxid: 9606)

>sp|Q9Z2Q1|SC31A_RAT Protein transport protein Sec31A OS=Rattus norvegicus GN=Sec31a PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
           + G ++G I +Y+   I++GD +V I  K KH+GPVRALD N FQ
Sbjct: 90  IAGGENGNIILYDPSKIIAGDKEVVIAQKDKHTGPVRALDVNIFQ 134

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.

Rattus norvegicus (taxid: 10116)

>sp|Q3UPL0|SC31A_MOUSE Protein transport protein Sec31A OS=Mus musculus GN=Sec31a PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
           + G ++G I +Y+   I++GD +V I  K KH+GPVRALD N FQ
Sbjct: 90  IAGGENGNIILYDPSKIIAGDKEVVIAQKDKHTGPVRALDVNIFQ 134

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.

Mus musculus (taxid: 10090)

>sp|Q5F3X8|SC31A_CHICK Protein transport protein Sec31A OS=Gallus gallus GN=SEC31A PE=2 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
           + G ++G + +Y+   I++GD +V I  K KH+GPVRALD N FQ
Sbjct: 90  IAGGENGNVILYDPAKIIAGDTEVIIAQKDKHTGPVRALDVNMFQ 134

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.

Gallus gallus (taxid: 9031)

>sp|Q7SYD5|SC31A_DANRE Protein transport protein Sec31A OS=Danio rerio GN=sec31a PE=2 SV=1

 Score = 43.1 bits (100), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDI-LSKKHSGPVRALDFNKFQ---VVATNFKIRAHL 56
           + G ++G I +Y+   I++GD++V I  S+KH+G VRALD N FQ   V +   +   ++
Sbjct: 90  IAGGENGNIILYDASKIIAGDSEVIISQSEKHTGAVRALDVNSFQSNLVASGGNESEIYI 149

Query: 57  WR-NLHHHFRVPGKKT 71
           W  N       PG KT
Sbjct: 150 WDLNNFSSPMTPGPKT 165

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.

Danio rerio (taxid: 7955)

>sp|Q5R4F4|SC31A_PONAB Protein transport protein Sec31A OS=Pongo abelii GN=SEC31A PE=2 SV=1

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQ 44
           + G ++G I +Y+   I++GD +V I  + KH+GPVRALD N FQ
Sbjct: 90  IAGGENGNIILYDPSKIIAGDKEVVIAQNDKHTGPVRALDVNIFQ 134

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.

Pongo abelii (taxid: 9601)

>sp|O94979|SC31A_HUMAN Protein transport protein Sec31A OS=Homo sapiens GN=SEC31A PE=1 SV=3

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQ 44
           + G ++G I +Y+   I++GD +V I  + KH+GPVRALD N FQ
Sbjct: 90  IAGGENGNIILYDPSKIIAGDKEVVIAQNDKHTGPVRALDVNIFQ 134

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
270011898	970	hypothetical protein TcasGA2_TC005989 [T	0.372	0.045	0.522	9e-07
91087995	1148	PREDICTED: similar to vesicle associated	0.372	0.038	0.522	9e-07
242013817	1198	conserved hypothetical protein [Pediculu	0.372	0.036	0.477	1e-05
312372069	495	hypothetical protein AND_20635 [Anophele	0.364	0.086	0.465	2e-05
158288080	1280	AGAP011551-PA [Anopheles gambiae str. PE	0.364	0.033	0.465	2e-05
350416231	1285	PREDICTED: protein transport protein Sec	0.364	0.033	0.521	3e-05
340711411	1276	PREDICTED: protein transport protein Sec	0.364	0.033	0.521	4e-05
110755248	1279	PREDICTED: protein transport protein Sec	0.372	0.034	0.511	5e-05
410895589	703	PREDICTED: protein transport protein Sec	0.372	0.062	0.555	5e-05
380030373	1274	PREDICTED: protein transport protein Sec	0.372	0.034	0.511	6e-05

>gi|270011898|gb|EFA08346.1| hypothetical protein TcasGA2_TC005989 [Tribolium castaneum]

 Score = 57.8 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/44 (52%), Positives = 32/44 (72%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ 44
           +GGCD G+IQ+Y+   +M+G+N +     KH+GPV ALDFN FQ
Sbjct: 84  VGGCDGGLIQIYSASKLMNGENGLICRQNKHTGPVHALDFNPFQ 127

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91087995|ref|XP_973673.1| PREDICTED: similar to vesicle associated protein, putative [Tribolium castaneum]

 Score = 57.8 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/44 (52%), Positives = 32/44 (72%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ 44
           +GGCD G+IQ+Y+   +M+G+N +     KH+GPV ALDFN FQ
Sbjct: 84  VGGCDGGLIQIYSASKLMNGENGLICRQNKHTGPVHALDFNPFQ 127

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013817|ref|XP_002427597.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512012|gb|EEB14859.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 31/44 (70%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ 44
           +GGCD G++Q+YN + +++G+  +     KH G VRALDFN FQ
Sbjct: 81  VGGCDGGVLQIYNANKLLNGETGLMSQQNKHKGSVRALDFNSFQ 124

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312372069|gb|EFR20113.1| hypothetical protein AND_20635 [Anopheles darlingi]

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 31/43 (72%)

Query: 2   GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ 44
           GGC+ G++Q+YNV  +++G N +    +KH G VR+LD+N FQ
Sbjct: 97  GGCESGVLQVYNVAQLLAGQNALVAQQEKHQGAVRSLDYNPFQ 139

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158288080|ref|XP_309957.4| AGAP011551-PA [Anopheles gambiae str. PEST] gi|157019302|gb|EAA05725.5| AGAP011551-PA [Anopheles gambiae str. PEST]

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 31/43 (72%)

Query: 2   GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ 44
           GGC+ G++Q+YNV  +++G N +    +KH G VR+LD+N FQ
Sbjct: 101 GGCESGVLQVYNVAQLLAGQNALVAQQEKHQGAVRSLDYNPFQ 143

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416231|ref|XP_003490882.1| PREDICTED: protein transport protein Sec31A-like [Bombus impatiens]

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 35/46 (76%), Gaps = 3/46 (6%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFNKFQ 44
           +GGCD GII++Y+   +++ DN   ++SK  +H+GPVRALDFN FQ
Sbjct: 86  VGGCDYGIIKIYSAAKMLANDNNY-LISKTDRHTGPVRALDFNPFQ 130

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711411|ref|XP_003394269.1| PREDICTED: protein transport protein Sec31A-like [Bombus terrestris]

 Score = 52.4 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 35/46 (76%), Gaps = 3/46 (6%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFNKFQ 44
           +GGCD GII++Y+   +++ DN   ++SK  +H+GPVRALDFN FQ
Sbjct: 86  VGGCDYGIIKIYSAAKMLANDNNY-LISKTDRHTGPVRALDFNPFQ 130

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110755248|ref|XP_393457.3| PREDICTED: protein transport protein Sec31A [Apis mellifera]

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILS-KKHSGPVRALDFNKFQ 44
           +GGCD G+I++Y+   +++ DN   I S  +H+GPVRALDFN FQ
Sbjct: 86  VGGCDYGMIKIYSAAKMLANDNNYLISSPDRHTGPVRALDFNPFQ 130

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|410895589|ref|XP_003961282.1| PREDICTED: protein transport protein Sec31A-like [Takifugu rubripes]

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMS-GDNKVDILSKKHSGPVRALDFNKFQ 44
           +GG ++GI+ +YN D IMS G + V   S KH+GP+RALDFN FQ
Sbjct: 89  IGGSENGILTVYNPDIIMSSGADAVVGQSDKHTGPIRALDFNPFQ 133

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|380030373|ref|XP_003698823.1| PREDICTED: protein transport protein Sec31A-like [Apis florea]

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 1   MGGCDDGIIQMYNVDNIMSGDNKVDILS-KKHSGPVRALDFNKFQ 44
           +GGCD G+I++Y+   +++ DN   I S  +H+GPVRALDFN FQ
Sbjct: 86  VGGCDYGMIKIYSAAKMLANDNNYLISSPDRHTGPVRALDFNPFQ 130

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
RGD|1598329	1179	Sec31b "SEC31 homolog B (S. ce	0.601	0.060	0.397	5.6e-06
ZFIN|ZDB-GENE-020919-2	1254	sec31a "sec31 homolog A (S. ce	0.601	0.056	0.368	3.4e-05
MGI|MGI:2685187	1158	Sec31b "Sec31 homolog B (S. ce	0.601	0.061	0.384	4.9e-05
FB|FBgn0033339	1241	sec31 "sec31" [Drosophila mela	0.364	0.034	0.413	5.4e-05
UNIPROTKB|F1NEB4	1226	SEC31A "Protein transport prot	0.593	0.057	0.376	0.00011
MGI|MGI:1916412	1230	Sec31a "Sec31 homolog A (S. ce	0.593	0.056	0.389	0.00011
RGD|620233	1249	Sec31a "SEC31 homolog A (S. ce	0.593	0.056	0.389	0.00011
UNIPROTKB|Q5F3X8	1227	SEC31A "Protein transport prot	0.593	0.057	0.376	0.00014
UNIPROTKB|Q9NQW1	1179	SEC31B "Protein transport prot	0.372	0.037	0.488	0.00022
UNIPROTKB|D6RHZ5	877	SEC31A "Protein transport prot	0.593	0.079	0.376	0.00025

RGD|1598329 Sec31b "SEC31 homolog B (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 111 (44.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
 Identities = 31/78 (39%), Positives = 45/78 (57%)

Query:     2 GGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ--VVATNFK-IRAHLW 57
             GG D G++ +YNV +I+S   +  I  K KH+G VRALDFN FQ  ++A+        +W
Sbjct:    90 GGGDSGMLTLYNVTHILSPGKEPLIAQKQKHTGAVRALDFNPFQGNLLASGASDSEIFIW 149

Query:    58 RNLHHHF--RVPGKKTFN 73
              +L+H      PG K+ N
Sbjct:   150 -DLNHLTVPMTPGSKSQN 166

GO:0044432 "endoplasmic reticulum part" evidence=ISO

ZFIN|ZDB-GENE-020919-2 sec31a "sec31 homolog A (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 104 (41.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
 Identities = 28/76 (36%), Positives = 43/76 (56%)

Query:     1 MGGCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQ---VVATNFKIRAHL 56
             + G ++G I +Y+   I++GD++V I  S+KH+G VRALD N FQ   V +   +   ++
Sbjct:    90 IAGGENGNIILYDASKIIAGDSEVIISQSEKHTGAVRALDVNSFQSNLVASGGNESEIYI 149

Query:    57 WR-NLHHHFRVPGKKT 71
             W  N       PG KT
Sbjct:   150 WDLNNFSSPMTPGPKT 165

GO:0001889 "liver development" evidence=IMP

GO:0007029 "endoplasmic reticulum organization" evidence=IMP

GO:0055123 "digestive system development" evidence=IMP

GO:0030134 "ER to Golgi transport vesicle" evidence=ISS

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

MGI|MGI:2685187 Sec31b "Sec31 homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 110 (43.8 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 30/78 (38%), Positives = 45/78 (57%)

Query:     2 GGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ--VVATNFK-IRAHLW 57
             GG D+G + +YNV +++S   +  I  K KH+G VRALDFN FQ  ++A+        +W
Sbjct:    90 GGGDNGTLTLYNVTHVLSSGKEPLIAQKQKHTGAVRALDFNPFQGNLLASGASDSEIFIW 149

Query:    58 RNLHHHF--RVPGKKTFN 73
              +L+H      PG K+ N
Sbjct:   150 -DLNHLSVPMTPGPKSQN 166

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0044432 "endoplasmic reticulum part" evidence=ISO

FB|FBgn0033339 sec31 "sec31" [Drosophila melanogaster (taxid:7227)]

 Score = 96 (38.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
 Identities = 19/46 (41%), Positives = 30/46 (65%)

Query:     1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFNKFQ 44
             +GGC+ G I +Y+ D +++G  +  +L +  KH+G V  LDFN FQ
Sbjct:    84 VGGCEAGQINIYSADKLLAGKEE-PLLKRQDKHTGAVSGLDFNPFQ 128

GO:0008021 "synaptic vesicle" evidence=ISS

GO:0030134 "ER to Golgi transport vesicle" evidence=TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005795 "Golgi stack" evidence=IDA

UNIPROTKB|F1NEB4 SEC31A "Protein transport protein Sec31A" [Gallus gallus (taxid:9031)]

 Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 29/77 (37%), Positives = 47/77 (61%)

Query:     1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ--VVATNF-KIRAHL 56
             + G ++G + +Y+   I++GD +V I  K KH+GPVRALD N FQ  +VA+   +   ++
Sbjct:    90 IAGGENGNVLLYDPAKIIAGDTEVIIAQKDKHTGPVRALDVNMFQTNLVASGANESEIYI 149

Query:    57 WRNLHHHFR--VPGKKT 71
             W +L++      PG KT
Sbjct:   150 W-DLNNFATPMTPGAKT 165

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0030134 "ER to Golgi transport vesicle" evidence=IEA

GO:0048306 "calcium-dependent protein binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0051592 "response to calcium ion" evidence=IEA

MGI|MGI:1916412 Sec31a "Sec31 homolog A (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 30/77 (38%), Positives = 47/77 (61%)

Query:     1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ--VVATNF-KIRAHL 56
             + G ++G I +Y+   I++GD +V I  K KH+GPVRALD N FQ  +VA+   +   ++
Sbjct:    90 IAGGENGNIILYDPSKIIAGDKEVVIAQKDKHTGPVRALDVNIFQTNLVASGANESEIYI 149

Query:    57 WRNLHHHFR--VPGKKT 71
             W +L++      PG KT
Sbjct:   150 W-DLNNFATPMTPGAKT 165

GO:0005737 "cytoplasm" evidence=ISO

GO:0005768 "endosome" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0030134 "ER to Golgi transport vesicle" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0044432 "endoplasmic reticulum part" evidence=ISO

GO:0048306 "calcium-dependent protein binding" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0051592 "response to calcium ion" evidence=ISO

RGD|620233 Sec31a "SEC31 homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 30/77 (38%), Positives = 47/77 (61%)

Query:     1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ--VVATNF-KIRAHL 56
             + G ++G I +Y+   I++GD +V I  K KH+GPVRALD N FQ  +VA+   +   ++
Sbjct:    90 IAGGENGNIILYDPSKIIAGDKEVVIAQKDKHTGPVRALDVNIFQTNLVASGANESEIYI 149

Query:    57 WRNLHHHFR--VPGKKT 71
             W +L++      PG KT
Sbjct:   150 W-DLNNFATPMTPGAKT 165

GO:0005737 "cytoplasm" evidence=ISO

GO:0005768 "endosome" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0030134 "ER to Golgi transport vesicle" evidence=IEA;ISO;ISS

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0044432 "endoplasmic reticulum part" evidence=ISO

GO:0048306 "calcium-dependent protein binding" evidence=IEA;ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA;ISO

GO:0051592 "response to calcium ion" evidence=IEA;ISO

UNIPROTKB|Q5F3X8 SEC31A "Protein transport protein Sec31A" [Gallus gallus (taxid:9031)]

 Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 29/77 (37%), Positives = 47/77 (61%)

Query:     1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ--VVATNF-KIRAHL 56
             + G ++G + +Y+   I++GD +V I  K KH+GPVRALD N FQ  +VA+   +   ++
Sbjct:    90 IAGGENGNVILYDPAKIIAGDTEVIIAQKDKHTGPVRALDVNMFQTNLVASGANESEIYI 149

Query:    57 WRNLHHHFR--VPGKKT 71
             W +L++      PG KT
Sbjct:   150 W-DLNNFATPMTPGAKT 165

GO:0015031 "protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0030134 "ER to Golgi transport vesicle" evidence=ISS

UNIPROTKB|Q9NQW1 SEC31B "Protein transport protein Sec31B" [Homo sapiens (taxid:9606)]

 Score = 104 (41.7 bits), Expect = 0.00022, P = 0.00022
 Identities = 22/45 (48%), Positives = 31/45 (68%)

Query:     1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
             +GG D+G++ +YNV +I+S   +  I  K KH+G VRALD N FQ
Sbjct:    89 VGGGDNGMLILYNVTHILSSGKEPVIAQKQKHTGAVRALDLNPFQ 133

GO:0015031 "protein transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0044432 "endoplasmic reticulum part" evidence=IDA

UNIPROTKB|D6RHZ5 SEC31A "Protein transport protein Sec31A" [Homo sapiens (taxid:9606)]

 Score = 102 (41.0 bits), Expect = 0.00025, P = 0.00025
 Identities = 29/77 (37%), Positives = 46/77 (59%)

Query:     1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ--VVATNF-KIRAHL 56
             + G ++G I +Y+   I++GD +V I    KH+GPVRALD N FQ  +VA+   +   ++
Sbjct:    90 IAGGENGNIILYDPSKIIAGDKEVVIAQNDKHTGPVRALDVNIFQTNLVASGANESEIYI 149

Query:    57 WRNLHHHFR--VPGKKT 71
             W +L++      PG KT
Sbjct:   150 W-DLNNFATPMTPGAKT 165

GO:0005737 "cytoplasm" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	118
KOG0307|consensus	1049		99.89
KOG0264|consensus	422		97.81
KOG0305|consensus	484		97.39
KOG0269|consensus	839		97.06
PTZ00421	493	coronin; Provisional	96.83
KOG0302|consensus	440		96.74
KOG0271|consensus	480		96.71
PTZ00420	568	coronin; Provisional	96.26
KOG0292|consensus	1202		96.24
PLN00181	793	protein SPA1-RELATED; Provisional	96.2
KOG0289|consensus	506		96.04
PTZ00420	568	coronin; Provisional	95.93
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	95.88
KOG1007|consensus	370		95.82
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	95.76
KOG0277|consensus	311		95.7
KOG1272|consensus	545		95.44
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	95.32
KOG0281|consensus	499		95.22
KOG0266|consensus	456		95.05
KOG0264|consensus	422		94.99
KOG0266|consensus	456		94.99
PTZ00421	493	coronin; Provisional	94.2
KOG0315|consensus	311		93.68
KOG0293|consensus	519		93.47
KOG1587|consensus	555		93.27
PLN00181	793	protein SPA1-RELATED; Provisional	92.68
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	92.54
KOG4328|consensus	498		92.4
KOG2321|consensus	703		92.05
KOG0270|consensus	463		91.8
KOG0273|consensus	524		91.67
KOG0305|consensus	484		91.62
KOG0772|consensus	641		91.59
KOG0771|consensus	398		91.55
KOG0313|consensus	423		91.42
KOG0642|consensus	577		91.31
KOG0302|consensus	440		91.09
KOG4714|consensus	319		91.03
KOG0270|consensus	463		91.01
KOG0281|consensus	499		90.89
KOG1446|consensus	311		90.89
KOG0296|consensus	399		90.54
KOG1009|consensus	434		90.51
KOG0277|consensus	311		90.29
KOG0291|consensus	893		90.28
KOG0274|consensus	537		90.13
KOG0273|consensus	524		89.24
KOG0268|consensus	433		88.7
KOG0284|consensus	464		87.6
KOG0644|consensus	1113		87.58
KOG0279|consensus	315		87.41
KOG0278|consensus	334		87.11
KOG2110|consensus	391		86.1
KOG0294|consensus	362		86.05
KOG0263|consensus	707		85.96
KOG1007|consensus	370		85.46
KOG0319|consensus	775		85.36
KOG0271|consensus	480		85.19
KOG0642|consensus	577		85.15
KOG0269|consensus	839		85.15
KOG0263|consensus	707		84.74
KOG0316|consensus	307		84.4
KOG0284|consensus	464		84.31
KOG0290|consensus	364		83.94
KOG4378|consensus	673		83.79
KOG0267|consensus	825		83.17
KOG1332|consensus	299		82.37
KOG0321|consensus	720		82.25
KOG0306|consensus	888		82.06
KOG0272|consensus	459		82.0
KOG0973|consensus	942		81.26
KOG1036|consensus	323		80.77
KOG0282|consensus	503		80.67
KOG0303|consensus	472		80.4
KOG0265|consensus	338		80.11

>KOG0307|consensus

Probab=99.89  E-value=3.2e-24  Score=198.34  Aligned_cols=92  Identities=28%  Similarity=0.426  Sum_probs=85.9

Q ss_pred             CCccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCCCCCCCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHFRVPGKKTF   72 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~t~PG~ks~   72 (118)
                      |||+|||.|.||||++|+++.+.++ ++.++|+|+|++|||||+|.|     |++|||  |||  ||+.+||+ ||+-..
T Consensus        84 aGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI--~iWDlnn~~tP~~-~~~~~~  160 (1049)
T KOG0307|consen   84 AGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEI--LIWDLNKPETPFT-PGSQAP  160 (1049)
T ss_pred             eccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcE--EEeccCCcCCCCC-CCCCCC
Confidence            7999999999999999999876655 999999999999999999999     999999  999  99999999 997668


Q ss_pred             cccceeeecCcceecchhhhhhh
Q psy14121         73 NLILGRLGLGQSFYGNRQSTQRH   95 (118)
Q Consensus        73 p~ei~~l~~~~~~~~~~~~~~~~   95 (118)
                      +.||+||.|||....|.+|...-
T Consensus       161 ~~eI~~lsWNrkvqhILAS~s~s  183 (1049)
T KOG0307|consen  161 PSEIKCLSWNRKVSHILASGSPS  183 (1049)
T ss_pred             cccceEeccchhhhHHhhccCCC
Confidence            99999999999999999998654

>KOG0264|consensus

Probab=97.81  E-value=2.8e-05  Score=67.99  Aligned_cols=85  Identities=21%  Similarity=0.295  Sum_probs=69.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCC-CCCCCCCCCc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHH-FRVPGKKTFN   73 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P-~t~PG~ks~p   73 (118)
                      ...|||.|.|||...   +.+......++|+++|.+|.|||+..+     ++|+-|  .+|  .|+.+| .+++|   -.
T Consensus       245 sv~dd~~L~iwD~R~---~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV--~LwDlRnL~~~lh~~e~---H~  316 (422)
T KOG0264|consen  245 SVGDDGKLMIWDTRS---NTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTV--ALWDLRNLNKPLHTFEG---HE  316 (422)
T ss_pred             eecCCCeEEEEEcCC---CCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcE--EEeechhcccCceeccC---CC
Confidence            357999999999865   233444889999999999999999999     679999  999  888876 45444   46


Q ss_pred             ccceeeecCcceecchhhhhh
Q psy14121         74 LILGRLGLGQSFYGNRQSTQR   94 (118)
Q Consensus        74 ~ei~~l~~~~~~~~~~~~~~~   94 (118)
                      .++-+|.|.-..+.+.+|-..
T Consensus       317 dev~~V~WSPh~etvLASSg~  337 (422)
T KOG0264|consen  317 DEVFQVEWSPHNETVLASSGT  337 (422)
T ss_pred             cceEEEEeCCCCCceeEeccc
Confidence            789999999999999888654

>KOG0305|consensus

Probab=97.39  E-value=0.00023  Score=62.94  Aligned_cols=75  Identities=15%  Similarity=0.250  Sum_probs=61.2

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-------CCcceehhhhh-ccCCCCCCCCCCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-------ATNFKIRAHLW-RNLHHHFRVPGKKTF   72 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-------gs~GEI~~fIW-nn~~~P~t~PG~ks~   72 (118)
                      |.|.-|..|.|||.     .......+...|+++|++|+|-|.|.+       ..|+-|  .+| -+..+.+.   .-.+
T Consensus       317 ASGgnDN~~~Iwd~-----~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i--~fwn~~~g~~i~---~vdt  386 (484)
T KOG0305|consen  317 ASGGNDNVVFIWDG-----LSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCI--KFWNTNTGARID---SVDT  386 (484)
T ss_pred             ccCCCccceEeccC-----CCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEE--EEEEcCCCcEec---cccc
Confidence            56777889999998     223345899999999999999999999       578899  999 55566776   5667


Q ss_pred             cccceeeecCcce
Q psy14121         73 NLILGRLGLGQSF   85 (118)
Q Consensus        73 p~ei~~l~~~~~~   85 (118)
                      -.+|..|.|.+.-
T Consensus       387 gsQVcsL~Wsk~~  399 (484)
T KOG0305|consen  387 GSQVCSLIWSKKY  399 (484)
T ss_pred             CCceeeEEEcCCC
Confidence            7899999998876

>KOG0269|consensus

Probab=97.06  E-value=0.00038  Score=64.92  Aligned_cols=74  Identities=15%  Similarity=0.289  Sum_probs=54.6

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh---ccCCCCCCCCCCCCCc
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW---RNLHHHFRVPGKKTFN   73 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW---nn~~~P~t~PG~ks~p   73 (118)
                      |.+-|+|.|++||-..    ...-..+...|+|||.+|+.+|-+..    |-|+.|  -||   .+-..|+.   +-.+-
T Consensus       193 ~s~~dsG~lqlWDlRq----p~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~v--kiWd~t~~~~~~~~---tInTi  263 (839)
T KOG0269|consen  193 ASIHDSGYLQLWDLRQ----PDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMV--KIWDMTDSRAKPKH---TINTI  263 (839)
T ss_pred             EEecCCceEEEeeccC----chhHHHHhhcccCceEEEeecCCCceeeecCCCccE--EEEeccCCCcccee---EEeec
Confidence            3577999999999632    12223889999999999999995555    889999  999   34456665   34445


Q ss_pred             ccceeeecCc
Q psy14121         74 LILGRLGLGQ   83 (118)
Q Consensus        74 ~ei~~l~~~~   83 (118)
                      .-+.||+|--
T Consensus       264 apv~rVkWRP  273 (839)
T KOG0269|consen  264 APVGRVKWRP  273 (839)
T ss_pred             ceeeeeeecc
Confidence            5678899853

>PTZ00421 coronin; Provisional

Probab=96.83  E-value=0.0012  Score=57.41  Aligned_cols=77  Identities=10%  Similarity=0.171  Sum_probs=50.1

Q ss_pred             CccccceEEEeehhh--hcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh-ccCCCC-CCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDN--IMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW-RNLHHH-FRVPGKKTF   72 (118)
Q Consensus         2 GGlenG~I~lwdp~k--IL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW-nn~~~P-~t~PG~ks~   72 (118)
                      .|.+||+|.|||...  +.......+.....|++.|.+|.|+|...+     +.|+.|  .|| -...++ .++.|   .
T Consensus        93 SgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV--rIWDl~tg~~~~~l~~---h  167 (493)
T PTZ00421         93 TASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV--NVWDVERGKAVEVIKC---H  167 (493)
T ss_pred             EEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE--EEEECCCCeEEEEEcC---C
Confidence            477999999999643  111111234667889999999999998876     779999  999 222222 22111   2


Q ss_pred             cccceeeecCc
Q psy14121         73 NLILGRLGLGQ   83 (118)
Q Consensus        73 p~ei~~l~~~~   83 (118)
                      ...|.+|.|+.
T Consensus       168 ~~~V~sla~sp  178 (493)
T PTZ00421        168 SDQITSLEWNL  178 (493)
T ss_pred             CCceEEEEEEC
Confidence            33466777753

>KOG0302|consensus

Probab=96.74  E-value=0.0013  Score=57.75  Aligned_cols=53  Identities=21%  Similarity=0.519  Sum_probs=46.9

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      |-|-|||++.|||-..+-.+  ..++..+.|.+||.+|+|+|....     |.|-+|  .||
T Consensus       318 asG~DdGt~~iwDLR~~~~~--~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Qi--tiW  375 (440)
T KOG0302|consen  318 ASGGDDGTLSIWDLRQFKSG--QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQI--TIW  375 (440)
T ss_pred             eecCCCceEEEEEhhhccCC--CcceeEEeccCCeeEEEeccccCceEEeccCCCcE--EEE
Confidence            45889999999998777555  456999999999999999998887     889999  999

>KOG0271|consensus

Probab=96.71  E-value=0.0019  Score=57.20  Aligned_cols=72  Identities=18%  Similarity=0.366  Sum_probs=55.3

Q ss_pred             CCccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC---------CCcceehhhhh-ccCCCC-CCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV---------ATNFKIRAHLW-RNLHHH-FRVPG   68 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N---------gs~GEI~~fIW-nn~~~P-~t~PG   68 (118)
                      |.|+-||+|.||||.+   |  +.+ .....|+-.|.+|.|-|..-.         ..||.|  .|| .+..+- +.+-|
T Consensus       173 ASG~~dg~I~lwdpkt---g--~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~v--rIWd~~~~~~~~~lsg  245 (480)
T KOG0271|consen  173 ASGSKDGSIRLWDPKT---G--QQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSV--RIWDTKLGTCVRTLSG  245 (480)
T ss_pred             hccccCCeEEEecCCC---C--CcccccccCcccceeEEeecccccCCCccceecccCCCCE--EEEEccCceEEEEecc
Confidence            5689999999999954   2  123 678889999999999999887         459999  999 555443 44333


Q ss_pred             CCCCcccceeeecC
Q psy14121         69 KKTFNLILGRLGLG   82 (118)
Q Consensus        69 ~ks~p~ei~~l~~~   82 (118)
                         --.-+.||.||
T Consensus       246 ---HT~~VTCvrwG  256 (480)
T KOG0271|consen  246 ---HTASVTCVRWG  256 (480)
T ss_pred             ---CccceEEEEEc
Confidence               34568999999

>PTZ00420 coronin; Provisional

Probab=96.26  E-value=0.0043  Score=55.45  Aligned_cols=77  Identities=16%  Similarity=0.311  Sum_probs=50.8

Q ss_pred             CCccccceEEEeehhhh---cCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCCCCCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNI---MSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHFRVPGKK   70 (118)
Q Consensus         1 aGGlenG~I~lwdp~kI---L~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~t~PG~k   70 (118)
                      |.|.+||+|.|||...-   +..-.+.+.....|++.|.+|.|+|...+     +.|+.|  -||  .+....+++.   
T Consensus        91 ASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtI--rIWDl~tg~~~~~i~---  165 (568)
T PTZ00420         91 ASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFV--NIWDIENEKRAFQIN---  165 (568)
T ss_pred             EEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeE--EEEECCCCcEEEEEe---
Confidence            35789999999997431   11001123456789999999999998776     568999  999  4433333321   


Q ss_pred             CCcccceeeecCc
Q psy14121         71 TFNLILGRLGLGQ   83 (118)
Q Consensus        71 s~p~ei~~l~~~~   83 (118)
                       .+..+.+|.|..
T Consensus       166 -~~~~V~Slswsp  177 (568)
T PTZ00420        166 -MPKKLSSLKWNI  177 (568)
T ss_pred             -cCCcEEEEEECC
Confidence             234577777753

>KOG0292|consensus

Probab=96.24  E-value=0.0025  Score=61.10  Aligned_cols=47  Identities=30%  Similarity=0.603  Sum_probs=40.5

Q ss_pred             ccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      ++-+|+|+|||=.-      ..+ .+...|-||||+++|.|.||=    |.|=.|  =+|
T Consensus        27 slHsG~IQlWDYRM------~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykI--kVW   78 (1202)
T KOG0292|consen   27 SLHSGVIQLWDYRM------GTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKI--KVW   78 (1202)
T ss_pred             eecCceeeeehhhh------hhHHhhhhccCCccceeeecCCCCeEEecCCccEE--EEE
Confidence            57799999999721      234 899999999999999999998    888889  899

>PLN00181 protein SPA1-RELATED; Provisional

Probab=96.20  E-value=0.0049  Score=54.89  Aligned_cols=49  Identities=18%  Similarity=0.426  Sum_probs=39.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||...     ...+...+.|+++|.+|+|+|...+     +.||.|  .||
T Consensus       550 s~~~Dg~v~lWd~~~-----~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v--~iW  603 (793)
T PLN00181        550 SSNFEGVVQVWDVAR-----SQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSV--KLW  603 (793)
T ss_pred             EEeCCCeEEEEECCC-----CeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEE--EEE
Confidence            466799999999742     1234677889999999999997766     779999  999

>KOG0289|consensus

Probab=96.04  E-value=0.0094  Score=53.29  Aligned_cols=72  Identities=24%  Similarity=0.486  Sum_probs=49.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCC--CCCCCCCCCCc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHH--HFRVPGKKTFN   73 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~--P~t~PG~ks~p   73 (118)
                      -|.+||.|.+||-.    .. ..+++..-|+|||++++|.--.=.    +.|++|  ++|  .+..+  -|.++  .  .
T Consensus       364 tgt~d~~vkiwdlk----s~-~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V--~lwDLRKl~n~kt~~l~--~--~  432 (506)
T KOG0289|consen  364 TGTPDGVVKIWDLK----SQ-TNVAKFPGHTGPVKAISFSENGYWLATAADDGSV--KLWDLRKLKNFKTIQLD--E--K  432 (506)
T ss_pred             ccCCCceEEEEEcC----Cc-cccccCCCCCCceeEEEeccCceEEEEEecCCeE--EEEEehhhcccceeecc--c--c
Confidence            48899999999962    22 256888889999999999753222    888999  999  55543  13311  1  1


Q ss_pred             ccceeeecCcc
Q psy14121         74 LILGRLGLGQS   84 (118)
Q Consensus        74 ~ei~~l~~~~~   84 (118)
                      -++..|.+.+|
T Consensus       433 ~~v~s~~fD~S  443 (506)
T KOG0289|consen  433 KEVNSLSFDQS  443 (506)
T ss_pred             ccceeEEEcCC
Confidence            15667777665

>PTZ00420 coronin; Provisional

Probab=95.93  E-value=0.008  Score=53.77  Aligned_cols=49  Identities=27%  Similarity=0.359  Sum_probs=41.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      ||...|.|.||++.+.     ..+.....|+++|.+|+|+|+..+     +.||.|  .||
T Consensus        49 gGG~~gvI~L~~~~r~-----~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtI--rIW  102 (568)
T PTZ00420         49 GGGLIGAIRLENQMRK-----PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTI--RVW  102 (568)
T ss_pred             CCCceeEEEeeecCCC-----ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeE--EEE
Confidence            6677899999997652     234677889999999999999777     789999  999

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=95.88  E-value=0.013  Score=40.30  Aligned_cols=72  Identities=18%  Similarity=0.322  Sum_probs=48.8

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCcccc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLIL   76 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei   76 (118)
                      |.++|.|.+||.+.-     ........|.++|..+.|.|....    +.+|.|  +||  .+......+.   .....+
T Consensus        27 ~~~~g~i~i~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i--~i~~~~~~~~~~~~~---~~~~~i   96 (289)
T cd00200          27 GSGDGTIKVWDLETG-----ELLRTLKGHTGPVRDVAASADGTYLASGSSDKTI--RLWDLETGECVRTLT---GHTSYV   96 (289)
T ss_pred             eecCcEEEEEEeeCC-----CcEEEEecCCcceeEEEECCCCCEEEEEcCCCeE--EEEEcCcccceEEEe---ccCCcE
Confidence            557999999997531     123667789999999999998855    669999  999  3222222211   123357


Q ss_pred             eeeecCcc
Q psy14121         77 GRLGLGQS   84 (118)
Q Consensus        77 ~~l~~~~~   84 (118)
                      .++.|...
T Consensus        97 ~~~~~~~~  104 (289)
T cd00200          97 SSVAFSPD  104 (289)
T ss_pred             EEEEEcCC
Confidence            77777653

>KOG1007|consensus

Probab=95.82  E-value=0.0051  Score=53.05  Aligned_cols=61  Identities=23%  Similarity=0.475  Sum_probs=47.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCC-CCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHH-FRVPG   68 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P-~t~PG   68 (118)
                      +.+.++++..||-.-+    .....-...|.--||.|||||....     |.+|-|  -||  .++..| +.+||
T Consensus       188 ~tt~d~tl~~~D~RT~----~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyv--riWD~R~tk~pv~el~~  256 (370)
T KOG1007|consen  188 ATTSDSTLQFWDLRTM----KKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYV--RIWDTRKTKFPVQELPG  256 (370)
T ss_pred             EEeCCCcEEEEEccch----hhhcchhhhhcceeeeccCCCCceEEEEEcCCCccE--EEEeccCCCccccccCC
Confidence            4567899999998532    1223566789999999999998887     999999  999  888887 44454

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=95.76  E-value=0.0071  Score=33.59  Aligned_cols=30  Identities=13%  Similarity=0.309  Sum_probs=26.4

Q ss_pred             ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121         26 ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus        26 ~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      ...+.|+++|.+|+|+|....    +.|+.|  .||
T Consensus         5 ~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i--~vw   38 (39)
T PF00400_consen    5 RTFRGHSSSINSIAWSPDGNFLASGSSDGTI--RVW   38 (39)
T ss_dssp             EEEESSSSSEEEEEEETTSSEEEEEETTSEE--EEE
T ss_pred             EEEcCCCCcEEEEEEecccccceeeCCCCEE--EEE
Confidence            567889999999999999665    888999  888

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0277|consensus

Probab=95.70  E-value=0.011  Score=50.08  Aligned_cols=72  Identities=13%  Similarity=0.136  Sum_probs=57.4

Q ss_pred             ccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCCCCCCCCCCcccce
Q psy14121          5 DDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLILG   77 (118)
Q Consensus         5 enG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei~   77 (118)
                      =||+|.||||..     ...+....-|.--|-+..|+|..+|     ..||-+  =||  .-+.++|.+|   .-.+||-
T Consensus       125 WD~TiKLW~~~r-----~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l--~lwdvr~~gk~~~i~---ah~~Eil  194 (311)
T KOG0277|consen  125 WDGTIKLWDPNR-----PNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTL--RLWDVRSPGKFMSIE---AHNSEIL  194 (311)
T ss_pred             cCCceEeecCCC-----CcceEeecCCccEEEEEecCCCCCCeEEEccCCceE--EEEEecCCCceeEEE---eccceeE
Confidence            389999999943     2345667779999999999999999     778888  999  7777888743   3348999


Q ss_pred             eeecCccee
Q psy14121         78 RLGLGQSFY   86 (118)
Q Consensus        78 ~l~~~~~~~   86 (118)
                      |-+|+..=.
T Consensus       195 ~cdw~ky~~  203 (311)
T KOG0277|consen  195 CCDWSKYNH  203 (311)
T ss_pred             eecccccCC
Confidence            999987643

>KOG1272|consensus

Probab=95.44  E-value=0.012  Score=53.13  Aligned_cols=56  Identities=18%  Similarity=0.411  Sum_probs=45.7

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCC
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFR   65 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t   65 (118)
                      |-.+|+|.||.|..     .+.+.+..-|.|||++|.|+|-..-    |.|..+  =||  .++.+|-+
T Consensus       269 GhsnGtVSlWSP~s-----kePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~--kIWDlR~~~ql~t  330 (545)
T KOG1272|consen  269 GHSNGTVSLWSPNS-----KEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKV--KIWDLRNFYQLHT  330 (545)
T ss_pred             cCCCceEEecCCCC-----cchHHHHHhcCCCcceEEECCCCcEEeecccccce--eEeeeccccccce
Confidence            45799999999932     3457899999999999999997665    999999  999  77766643

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=95.32  E-value=0.017  Score=39.75  Aligned_cols=49  Identities=20%  Similarity=0.449  Sum_probs=37.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      ++.++|.|.+||...   +  ..+.....|.+.|.+++|.|....    +.+|.|  .||
T Consensus       236 ~~~~~~~i~i~~~~~---~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i--~iw  288 (289)
T cd00200         236 SGSEDGTIRVWDLRT---G--ECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTI--RIW  288 (289)
T ss_pred             EEcCCCcEEEEEcCC---c--eeEEEccccCCcEEEEEECCCCCEEEEecCCCeE--Eec
Confidence            344699999999853   1  223555689999999999997555    788899  888

>KOG0281|consensus

Probab=95.22  E-value=0.02  Score=50.68  Aligned_cols=55  Identities=25%  Similarity=0.509  Sum_probs=45.3

Q ss_pred             CCccccceEEEeehhhhcCCCC--cc--cccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDN--KV--DILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW   57 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~--~~--l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW   57 (118)
                      +.|.=||.|.+||-..-++...  ..  +.....|+|.|-.|||.-||--  .-+.||  .||
T Consensus       414 VSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtI--LiW  474 (499)
T KOG0281|consen  414 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTI--LIW  474 (499)
T ss_pred             eeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeE--EEE
Confidence            3567799999999877776532  22  2789999999999999999988  778999  999

>KOG0266|consensus

Probab=95.05  E-value=0.021  Score=48.36  Aligned_cols=49  Identities=27%  Similarity=0.491  Sum_probs=41.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      -|..||+|.|||...   +  ..+...+.|+++|.+++|++--.-    ..|+.|  .||
T Consensus       263 Sgs~D~tvriWd~~~---~--~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i--~vw  315 (456)
T KOG0266|consen  263 SGSDDGTVRIWDVRT---G--ECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTI--RVW  315 (456)
T ss_pred             EecCCCcEEEEeccC---C--eEEEeeeccCCceEEEEECCCCCEEEEcCCCccE--EEE
Confidence            478899999999965   1  233899999999999999998777    559999  999

>KOG0264|consensus

Probab=94.99  E-value=0.029  Score=49.48  Aligned_cols=89  Identities=12%  Similarity=0.163  Sum_probs=66.5

Q ss_pred             CCccccceEEEeehhhhcCCC--CcccccccccccceeEEEeccCCCC-----CCcceehhhhh---ccCCCCCCCCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGD--NKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW---RNLHHHFRVPGKK   70 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~--~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW---nn~~~P~t~PG~k   70 (118)
                      ++|-+|+.|.+||-..-=...  ........-|+.+|-.+.|.|+..+     +.++-+  .||   .++.+|.. +. +
T Consensus       194 ls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L--~iwD~R~~~~~~~~-~~-~  269 (422)
T KOG0264|consen  194 LSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKL--MIWDTRSNTSKPSH-SV-K  269 (422)
T ss_pred             eeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeE--EEEEcCCCCCCCcc-cc-c
Confidence            468899999999975532211  1122788999999999999999999     889999  999   23666766 54 4


Q ss_pred             CCcccceeeecCcceecchhhhh
Q psy14121         71 TFNLILGRLGLGQSFYGNRQSTQ   93 (118)
Q Consensus        71 s~p~ei~~l~~~~~~~~~~~~~~   93 (118)
                      .-..++-||.||-.-+-+.|+.+
T Consensus       270 ah~~~vn~~~fnp~~~~ilAT~S  292 (422)
T KOG0264|consen  270 AHSAEVNCVAFNPFNEFILATGS  292 (422)
T ss_pred             ccCCceeEEEeCCCCCceEEecc
Confidence            46788999999976655555444

>KOG0266|consensus

Probab=94.99  E-value=0.022  Score=48.18  Aligned_cols=51  Identities=20%  Similarity=0.416  Sum_probs=40.8

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      +.|.+|++|.+||...    .-..+...+-|+..|-+++|||....    +.|+.|  .||
T Consensus       219 ~s~s~D~tiriwd~~~----~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tv--riW  273 (456)
T KOG0266|consen  219 LSGSDDKTLRIWDLKD----DGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTV--RIW  273 (456)
T ss_pred             EEecCCceEEEeeccC----CCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcE--EEE
Confidence            4678999999999911    11123677799999999999999933    899999  999

>PTZ00421 coronin; Provisional

Probab=94.20  E-value=0.04  Score=48.04  Aligned_cols=49  Identities=20%  Similarity=0.365  Sum_probs=38.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||.+.   +  ..+.....|++.|.+|+|+|...-    +.|+.|  .||
T Consensus       143 Sgs~DgtVrIWDl~t---g--~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~I--rIw  195 (493)
T PTZ00421        143 SAGADMVVNVWDVER---G--KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKL--NII  195 (493)
T ss_pred             EEeCCCEEEEEECCC---C--eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEE--EEE
Confidence            356799999999853   1  223566779999999999997665    779999  999

>KOG0315|consensus

Probab=93.68  E-value=0.12  Score=43.98  Aligned_cols=47  Identities=19%  Similarity=0.468  Sum_probs=41.4

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.|||++.+||-..+      .+-+.-+|..||.++-.+|.|..    ..+|-|  .||
T Consensus       101 gseDgt~kIWdlR~~------~~qR~~~~~spVn~vvlhpnQteLis~dqsg~i--rvW  151 (311)
T KOG0315|consen  101 GSEDGTVKIWDLRSL------SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNI--RVW  151 (311)
T ss_pred             cCCCceEEEEeccCc------ccchhccCCCCcceEEecCCcceEEeecCCCcE--EEE
Confidence            789999999998653      34778889999999999999999    788999  999

>KOG0293|consensus

Probab=93.47  E-value=0.079  Score=47.57  Aligned_cols=50  Identities=20%  Similarity=0.382  Sum_probs=42.4

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      |.|-||+.|.+|+-..   |  ..++..+-|++.|..+..||..+.     +.||.|  =||
T Consensus       456 aSGSED~kvyIWhr~s---g--kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtI--RIW  510 (519)
T KOG0293|consen  456 ASGSEDSKVYIWHRIS---G--KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTI--RIW  510 (519)
T ss_pred             EecCCCceEEEEEccC---C--ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeE--EEe
Confidence            4688999999998621   1  234889999999999999999998     788999  999

>KOG1587|consensus

Probab=93.27  E-value=0.1  Score=47.01  Aligned_cols=62  Identities=21%  Similarity=0.305  Sum_probs=45.2

Q ss_pred             CCccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC------CCcceehhhhh--ccCCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV------ATNFKIRAHLW--RNLHHHF   64 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N------gs~GEI~~fIW--nn~~~P~   64 (118)
                      ||||.||.|.|||-.+.=..--..+ .....|+.+|-++-......|      .+||.|  ..|  ...+.|.
T Consensus       259 ~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i--~~W~~~~l~~P~  329 (555)
T KOG1587|consen  259 AGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSI--CSWDTDMLSLPV  329 (555)
T ss_pred             EeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcE--eeeeccccccch
Confidence            6999999999999865422111223 778889999888766554444      789999  999  7777774

>PLN00181 protein SPA1-RELATED; Provisional

Probab=92.68  E-value=0.12  Score=46.20  Aligned_cols=54  Identities=9%  Similarity=0.131  Sum_probs=41.1

Q ss_pred             CccccceEEEeehhhhcCCCC-cccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDN-KVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~-~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||..+-..+.. ..+.....|+..|..+.|+|...-    +.+++|  +||
T Consensus       677 s~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v--~iw  735 (793)
T PLN00181        677 SSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEV--FVY  735 (793)
T ss_pred             EEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEE--EEE
Confidence            356899999999864322222 234677889999999999997655    679999  999

>smart00320 WD40 WD40 repeats

Probab=92.54  E-value=0.12  Score=24.96  Aligned_cols=30  Identities=30%  Similarity=0.491  Sum_probs=23.8

Q ss_pred             ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121         26 ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus        26 ~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .....|..+|.+|+|++...-    +.++.|  .+|
T Consensus         6 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~--~~~   39 (40)
T smart00320        6 KTLKGHTGPVTSVAFSPDGKYLASASDDGTI--KLW   39 (40)
T ss_pred             EEEEecCCceeEEEECCCCCEEEEecCCCeE--EEc
Confidence            344578899999999997644    788888  887

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4328|consensus

Probab=92.40  E-value=0.11  Score=46.76  Aligned_cols=49  Identities=27%  Similarity=0.359  Sum_probs=37.3

Q ss_pred             CccccceEEEeehhhhcCC-CCcccccccccccceeEEEeccCCCC-----CCccee
Q psy14121          2 GGCDDGIIQMYNVDNIMSG-DNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKI   52 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g-~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI   52 (118)
                      .|--.|.|.|||-.  ..+ +.+.+.....|++||.+|+|+|...+     ..||-|
T Consensus       205 ~GdK~G~VG~Wn~~--~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGti  259 (498)
T KOG4328|consen  205 VGDKGGQVGLWNFG--TQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTI  259 (498)
T ss_pred             EccCCCcEEEEecC--CCCCccCceEEeccCCccccceEecCCChhheeeeccCcee
Confidence            46667999999985  222 22346889999999999999999888     455555

>KOG2321|consensus

Probab=92.05  E-value=0.19  Score=46.66  Aligned_cols=81  Identities=15%  Similarity=0.279  Sum_probs=55.8

Q ss_pred             CCccccceEEEeehhhh-cCCCCcccccccccccc-----eeEEEeccCCCC----CCcceehhhhh-ccCCCCCCCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNI-MSGDNKVDILSKKHSGP-----VRALDFNKFQVV----ATNFKIRAHLW-RNLHHHFRVPGK   69 (118)
Q Consensus         1 aGGlenG~I~lwdp~kI-L~g~~~~l~~~~KHtGp-----VraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P~t~PG~   69 (118)
                      |.|.++|+|++|||.-= .-+.-+.......|.|.     |.+|.|+--.=+    -+.|.|  ||+ =-.++|+. --.
T Consensus       191 a~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v--~iyDLRa~~pl~-~kd  267 (703)
T KOG2321|consen  191 ACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSV--LIYDLRASKPLL-VKD  267 (703)
T ss_pred             EecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcE--EEEEcccCCcee-ecc
Confidence            46899999999999431 11111111445667776     999999864333    689999  999 66678876 233


Q ss_pred             CCCcccceeeecCcc
Q psy14121         70 KTFNLILGRLGLGQS   84 (118)
Q Consensus        70 ks~p~ei~~l~~~~~   84 (118)
                      -...+.|+.|+|..+
T Consensus       268 h~~e~pi~~l~~~~~  282 (703)
T KOG2321|consen  268 HGYELPIKKLDWQDT  282 (703)
T ss_pred             cCCccceeeeccccc
Confidence            445888999999665

>KOG0270|consensus

Probab=91.80  E-value=0.26  Score=44.10  Aligned_cols=46  Identities=15%  Similarity=0.345  Sum_probs=35.3

Q ss_pred             CCccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC-----CCccee
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV-----ATNFKI   52 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N-----gs~GEI   52 (118)
                      |.|..|-+|.|||.+.      ... ..+..|++.|.+|+|+|+.+.     .-++.+
T Consensus       260 aSgsaD~TV~lWD~~~------g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V  311 (463)
T KOG0270|consen  260 ASGSADKTVKLWDVDT------GKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTV  311 (463)
T ss_pred             EecCCCceEEEEEcCC------CCcceehhhcCCceeEEEecCCCceEEEeccccceE
Confidence            4577889999999854      123 555679999999999999998     446655

>KOG0273|consensus

Probab=91.67  E-value=0.21  Score=45.19  Aligned_cols=55  Identities=16%  Similarity=0.263  Sum_probs=42.8

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCCC
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHHF   64 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P~   64 (118)
                      +.-|++|.|||++...     .++...||+-||-+|+|.|-..-    .-+|-|  .|| ....+=|
T Consensus       428 as~dstV~lwdv~~gv-----~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V--~iws~~~~~l~  487 (524)
T KOG0273|consen  428 ASFDSTVKLWDVESGV-----PIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCV--HIWSTKTGKLV  487 (524)
T ss_pred             eecCCeEEEEEccCCc-----eeEeeccCCCceEEEEecCCCcEEEecCCCCee--Eeccccchhee
Confidence            4568999999995432     24889999999999999997776    678889  999 4444443

>KOG0305|consensus

Probab=91.62  E-value=0.2  Score=44.66  Aligned_cols=59  Identities=12%  Similarity=0.116  Sum_probs=44.2

Q ss_pred             ccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCcccceeeecCcceecchhh
Q psy14121         28 SKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLILGRLGLGQSFYGNRQS   91 (118)
Q Consensus        28 ~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei~~l~~~~~~~~~~~~   91 (118)
                      .+-|..-|.+|.+++...-    |.|.-+  +||  ..+..++++   ......++-++|--..-++.|+
T Consensus       297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~--~Iwd~~~~~p~~~~---~~H~aAVKA~awcP~q~~lLAs  361 (484)
T KOG0305|consen  297 LQGHRQEVCGLKWSPDGNQLASGGNDNVV--FIWDGLSPEPKFTF---TEHTAAVKALAWCPWQSGLLAT  361 (484)
T ss_pred             hhcccceeeeeEECCCCCeeccCCCccce--EeccCCCccccEEE---eccceeeeEeeeCCCccCceEE
Confidence            6679999999999998877    999999  999  344444553   3456778888887666666553

>KOG0772|consensus

Probab=91.59  E-value=0.19  Score=46.20  Aligned_cols=59  Identities=19%  Similarity=0.350  Sum_probs=44.8

Q ss_pred             CCccccceEEEeehhhhcCCCCccccccccccc--ceeEEEeccCCCC----CCcceehhhhh--ccCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSG--PVRALDFNKFQVV----ATNFKIRAHLW--RNLHHH   63 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtG--pVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P   63 (118)
                      |+||.||+|++|+--+.-..  -.+.-.+.|.+  -+.+|.|.+...-    +.|+-+  =+|  .++.+|
T Consensus       333 Aagc~DGSIQ~W~~~~~~v~--p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tL--KvWDLrq~kkp  399 (641)
T KOG0772|consen  333 AAGCLDGSIQIWDKGSRTVR--PVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTL--KVWDLRQFKKP  399 (641)
T ss_pred             hhcccCCceeeeecCCcccc--cceEeeeccCCCCceeEEEeccccchhhhccCCCce--eeeeccccccc
Confidence            78999999999995333211  12356678988  9999999998777    888888  889  666665

>KOG0771|consensus

Probab=91.55  E-value=0.095  Score=46.00  Aligned_cols=47  Identities=19%  Similarity=0.413  Sum_probs=37.2

Q ss_pred             CccccceEEEee-hhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYN-VDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwd-p~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      -|-+||.+.+|+ |...      .+....+|.+.|+.|||.|...-    +.+ ..  .||
T Consensus       161 tgg~dg~lRv~~~Ps~~------t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~--~VW  212 (398)
T KOG0771|consen  161 TGGTDGTLRVWEWPSML------TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SA--RVW  212 (398)
T ss_pred             eccccceEEEEecCcch------hhhhhHhhcCccccceeCCCCcEEEEecCC-ce--EEE
Confidence            467899999999 7443      24778899999999999998876    455 44  779

>KOG0313|consensus

Probab=91.42  E-value=0.19  Score=44.41  Aligned_cols=77  Identities=16%  Similarity=0.231  Sum_probs=61.2

Q ss_pred             CCccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCC-CCCCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHF-RVPGKKT   71 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~-t~PG~ks   71 (118)
                      |.|+.|-.|.||||.+   ++...+ .+..-|++=|.+|+.+|...+     .-|+.+  =+|  ..+..|+ .+   ..
T Consensus       316 ~~gssdr~irl~DPR~---~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~--klWDvRS~k~plydI---~~  387 (423)
T KOG0313|consen  316 ASGSSDRHIRLWDPRT---GDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTV--KLWDVRSTKAPLYDI---AG  387 (423)
T ss_pred             eecCCCCceeecCCCC---CCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeE--EEEEeccCCCcceee---cc
Confidence            4688899999999965   332334 899999999999999999998     789999  999  7777785 42   22


Q ss_pred             CcccceeeecCcce
Q psy14121         72 FNLILGRLGLGQSF   85 (118)
Q Consensus        72 ~p~ei~~l~~~~~~   85 (118)
                      ...-+-|++|+..-
T Consensus       388 h~DKvl~vdW~~~~  401 (423)
T KOG0313|consen  388 HNDKVLSVDWNEGG  401 (423)
T ss_pred             CCceEEEEeccCCc
Confidence            36777889999763

>KOG0642|consensus

Probab=91.31  E-value=0.15  Score=46.62  Aligned_cols=56  Identities=18%  Similarity=0.309  Sum_probs=45.2

Q ss_pred             ccccceEEEeehhhhcCCCCc---ccccccccccceeEEEeccCCCC----CCcceehhhhhccC
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNK---VDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRNL   60 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~---~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn~   60 (118)
                      |-|||.|.||+-.|-.+..+.   .+.....|.|||.++..-+-...    |.||-|  .-||-|
T Consensus       312 ~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I--~~w~~p  374 (577)
T KOG0642|consen  312 ASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI--RCWNLP  374 (577)
T ss_pred             eccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee--eeeccC
Confidence            679999999999874444332   24789999999999999887777    999999  999655

>KOG0302|consensus

Probab=91.09  E-value=0.28  Score=43.57  Aligned_cols=74  Identities=18%  Similarity=0.361  Sum_probs=53.1

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccC--CCCCCCCCCCCCcc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNL--HHHFRVPGKKTFNL   74 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~--~~P~t~PG~ks~p~   74 (118)
                      +.-||+|.|||-.   ++...+....+.|.+-|..++||..-+-    +.+|.+  -||  .+.  .+|...  =+--..
T Consensus       276 cS~DgsIrIWDiR---s~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~--~iwDLR~~~~~~pVA~--fk~Hk~  348 (440)
T KOG0302|consen  276 CSCDGSIRIWDIR---SGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTL--SIWDLRQFKSGQPVAT--FKYHKA  348 (440)
T ss_pred             eecCceEEEEEec---CCCccceeEeeccCCceeeEEccCCcceeeecCCCceE--EEEEhhhccCCCccee--EEeccC
Confidence            4568999999963   3333344444999999999999998884    899999  999  443  355320  123466


Q ss_pred             cceeeecCc
Q psy14121         75 ILGRLGLGQ   83 (118)
Q Consensus        75 ei~~l~~~~   83 (118)
                      -|.||.|.-
T Consensus       349 pItsieW~p  357 (440)
T KOG0302|consen  349 PITSIEWHP  357 (440)
T ss_pred             CeeEEEecc
Confidence            789999984

>KOG4714|consensus

Probab=91.03  E-value=0.078  Score=45.27  Aligned_cols=50  Identities=22%  Similarity=0.415  Sum_probs=43.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.|+|.|.|||+..+    .-.+...+.|..++..+-|.|..+.     +.+|++  +-|
T Consensus       197 cgt~dg~~~l~d~rn~----~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGsl--w~w  251 (319)
T KOG4714|consen  197 CGTDDGIVGLWDARNV----AMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSL--WHW  251 (319)
T ss_pred             EecCCCeEEEEEcccc----cchHHHHHHhhhhhhheeccCCCchheeEecCCCcE--EEE
Confidence            5889999999999876    1223788899999999999999988     999999  888

>KOG0270|consensus

Probab=91.01  E-value=0.25  Score=44.12  Aligned_cols=50  Identities=24%  Similarity=0.347  Sum_probs=43.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|++||+|.=+|..+.    .+.+-+.+.|.++|.+|++|++.++     ++++-+  .+|
T Consensus       347 ~~tddG~v~~~D~R~~----~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~V--klw  401 (463)
T KOG0270|consen  347 VSTDDGTVYYFDIRNP----GKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVV--KLW  401 (463)
T ss_pred             EecCCceEEeeecCCC----CCceeEEEeccCCcceEEecCCCCcceeeccccceE--EEE
Confidence            4689999999998553    2456899999999999999999999     788889  999

>KOG0281|consensus

Probab=90.89  E-value=0.16  Score=45.17  Aligned_cols=56  Identities=18%  Similarity=0.436  Sum_probs=41.6

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh-ccCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW-RNLHHH   63 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW-nn~~~P   63 (118)
                      +.|+-|.+|.+||...+-     -+....-|||.|.+|||...---  .+|+.|  -|| -+...|
T Consensus       211 VSGlrDnTikiWD~n~~~-----c~~~L~GHtGSVLCLqyd~rviisGSSDsTv--rvWDv~tge~  269 (499)
T KOG0281|consen  211 VSGLRDNTIKIWDKNSLE-----CLKILTGHTGSVLCLQYDERVIVSGSSDSTV--RVWDVNTGEP  269 (499)
T ss_pred             hcccccCceEEeccccHH-----HHHhhhcCCCcEEeeeccceEEEecCCCceE--EEEeccCCch
Confidence            468888899999875431     23778889999999999875322  889999  899 444444

>KOG1446|consensus

Probab=90.89  E-value=0.13  Score=43.84  Aligned_cols=50  Identities=30%  Similarity=0.658  Sum_probs=37.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW   57 (118)
                      +|-+||.|.+||.+    ....+..-...|.|+|..+.|||.-.-  .++.++  -+|
T Consensus       249 ~gs~dg~i~vw~~~----tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l--~fw  300 (311)
T KOG1446|consen  249 SGSDDGTIHVWNLE----TGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSNL--VFW  300 (311)
T ss_pred             EecCCCcEEEEEcC----CCcEeeEecCCCCCCccccccCCceeeeeecCceE--EEE
Confidence            67889999999982    112222222339999999999998888  777888  778

>KOG0296|consensus

Probab=90.54  E-value=0.27  Score=43.29  Aligned_cols=66  Identities=15%  Similarity=0.158  Sum_probs=44.4

Q ss_pred             ehhhhcCCC-CcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCcccceeeecCc
Q psy14121         13 NVDNIMSGD-NKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLILGRLGLGQ   83 (118)
Q Consensus        13 dp~kIL~g~-~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei~~l~~~~   83 (118)
                      |++..+..+ ++++...+||+++|-++..+| ..|    |..-. +||||  ++-..++.++|-|   ..+.|++|.-
T Consensus        44 dd~E~~~~~mDdS~~tF~~H~~svFavsl~P-~~~l~aTGGgDD-~AflW~~~~ge~~~eltgHK---DSVt~~~Fsh  116 (399)
T KOG0296|consen   44 DDEEALEVDMDDSLVTFDKHTDSVFAVSLHP-NNNLVATGGGDD-LAFLWDISTGEFAGELTGHK---DSVTCCSFSH  116 (399)
T ss_pred             CchHHhhcccccceeehhhcCCceEEEEeCC-CCceEEecCCCc-eEEEEEccCCcceeEecCCC---CceEEEEEcc
Confidence            444433333 445688999999999999999 444    33223 47999  4444677767755   5678888753

>KOG1009|consensus

Probab=90.51  E-value=0.33  Score=43.11  Aligned_cols=53  Identities=21%  Similarity=0.330  Sum_probs=41.1

Q ss_pred             ccccceEEEeehhhhcCCCC--cc--cccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDN--KV--DILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~--~~--l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.-|-.|.+|-...-..+..  ..  ++....|+++|.++-|||-..-    +.+|||  |||
T Consensus        32 ~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v--~lW   92 (434)
T KOG1009|consen   32 AGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEV--FLW   92 (434)
T ss_pred             ccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceE--EEE
Confidence            34456789997666555442  22  2899999999999999998665    889999  999

>KOG0277|consensus

Probab=90.29  E-value=0.22  Score=42.46  Aligned_cols=59  Identities=19%  Similarity=0.295  Sum_probs=45.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHFRV   66 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~t~   66 (118)
                      .++.||+|+|||    +.-.+..+...+.|.--|.++|.|+....     .=||.|  =+|  |-+..=+|+
T Consensus        78 ~a~GDGSLrl~d----~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~Ti--KLW~~~r~~Sv~Tf  143 (311)
T KOG0277|consen   78 AASGDGSLRLFD----LTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTI--KLWDPNRPNSVQTF  143 (311)
T ss_pred             EEecCceEEEec----cCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCce--EeecCCCCcceEee
Confidence            467899999999    33334567999999999999999998766     678899  899  555544443

>KOG0291|consensus

Probab=90.28  E-value=0.34  Score=46.07  Aligned_cols=49  Identities=20%  Similarity=0.419  Sum_probs=41.6

Q ss_pred             CCccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |-|+|||.|.|||-.      +.-+ ...+.||..|.+|+|-..+.-    .-||-|  =+|
T Consensus       366 aTG~eDgKVKvWn~~------SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtV--RAw  419 (893)
T KOG0291|consen  366 ATGAEDGKVKVWNTQ------SGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTV--RAW  419 (893)
T ss_pred             EeccCCCcEEEEecc------CceEEEEeccCCCceEEEEEEecCCEEEEeecCCeE--Eee
Confidence            468999999999972      2234 899999999999999998887    889999  567

>KOG0274|consensus

Probab=90.13  E-value=0.2  Score=44.58  Aligned_cols=52  Identities=21%  Similarity=0.372  Sum_probs=40.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh--ccC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW--RNL   60 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW--nn~   60 (118)
                      .|..||+|.+||+.   .  -+-+...+.|+++|.+|.|.+.+.-   +.|+.|  =+|  .++
T Consensus       346 sgs~d~~v~VW~~~---~--~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~I--kvWdl~~~  402 (537)
T KOG0274|consen  346 SGSYDGTVKVWDPR---T--GKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTI--KVWDLRTK  402 (537)
T ss_pred             EEecCceEEEEEhh---h--ceeeeeecCCcceEEEEEecCcceEEeeeeccce--EeecCCch
Confidence            47889999999997   1  1234888889999999998886111   788999  999  555

>KOG0273|consensus

Probab=89.24  E-value=0.35  Score=43.80  Aligned_cols=49  Identities=27%  Similarity=0.425  Sum_probs=41.3

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhhcc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRN   59 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn   59 (118)
                      =|.+||.+++||-+       ..+ .....|.|||-+|..|.....    +.|+-+  -||+.
T Consensus       252 tG~~~G~~riw~~~-------G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~tt--ilwd~  305 (524)
T KOG0273|consen  252 TGSEDGEARIWNKD-------GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTT--ILWDA  305 (524)
T ss_pred             EeecCcEEEEEecC-------chhhhhhhccCCceEEEEEcCCCCEEEeccCCccE--EEEec
Confidence            37899999999862       234 788999999999999998877    889999  99944

>KOG0268|consensus

Probab=88.70  E-value=0.59  Score=41.45  Aligned_cols=85  Identities=22%  Similarity=0.252  Sum_probs=59.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEecc--C-------------------------------CC---
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNK--F-------------------------------QV---   45 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp--~-------------------------------Q~---   45 (118)
                      -|.-||.|.|||.+.-.     .....+.|.|.|++|-+.-  +                               ..   
T Consensus        84 SGs~DG~VkiWnlsqR~-----~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~  158 (433)
T KOG0268|consen   84 SGSCDGEVKIWNLSQRE-----CIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRK  158 (433)
T ss_pred             ccccCceEEEEehhhhh-----hhheeecccCceeeEEecccceEEecCCcceeeeeccCCcceeeeccccccccccccc
Confidence            46679999999986531     2378889999999986643  0                               00   


Q ss_pred             C---CCcce-ehhhhh----ccCCCCCCCCCCCCCcccceeeecCcceecchhhhhhhhcc
Q psy14121         46 V---ATNFK-IRAHLW----RNLHHHFRVPGKKTFNLILGRLGLGQSFYGNRQSTQRHRSE   98 (118)
Q Consensus        46 N---gs~GE-I~~fIW----nn~~~P~t~PG~ks~p~ei~~l~~~~~~~~~~~~~~~~~~~   98 (118)
                      +   ++.|| |  -||    ++|-+-|+ -|..    .|.|+..|.--.++.+|.-+-||-
T Consensus       159 ~~~FaTcGe~i--~IWD~~R~~Pv~sms-wG~D----ti~svkfNpvETsILas~~sDrsI  212 (433)
T KOG0268|consen  159 NSVFATCGEQI--DIWDEQRDNPVSSMS-WGAD----SISSVKFNPVETSILASCASDRSI  212 (433)
T ss_pred             cccccccCcee--eecccccCCccceee-cCCC----ceeEEecCCCcchheeeeccCCce
Confidence            0   45554 5  689    55666677 5543    478899999888888888777764

>KOG0284|consensus

Probab=87.60  E-value=0.99  Score=40.44  Aligned_cols=37  Identities=22%  Similarity=0.389  Sum_probs=25.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ   44 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q   44 (118)
                      ||-|| .|.||||..   |  ..+++...|+-.|.+|.|||..
T Consensus       240 gskDn-lVKlWDprS---g--~cl~tlh~HKntVl~~~f~~n~  276 (464)
T KOG0284|consen  240 GSKDN-LVKLWDPRS---G--SCLATLHGHKNTVLAVKFNPNG  276 (464)
T ss_pred             ccCCc-eeEeecCCC---c--chhhhhhhccceEEEEEEcCCC
Confidence            55566 999999932   1  1236777777777777777766

>KOG0644|consensus

Probab=87.58  E-value=0.42  Score=46.18  Aligned_cols=49  Identities=18%  Similarity=0.419  Sum_probs=38.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCCCCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~Ngs~GEI~~fIW   57 (118)
                      +|--|-+|++|--   -++  ..++-..-|||+|.+|+|.|++..+.+|-+  .||
T Consensus       249 aaS~D~vIrvWrl---~~~--~pvsvLrghtgavtaiafsP~~sss~dgt~--~~w  297 (1113)
T KOG0644|consen  249 AASNDKVIRVWRL---PDG--APVSVLRGHTGAVTAIAFSPRASSSDDGTC--RIW  297 (1113)
T ss_pred             hcccCceEEEEec---CCC--chHHHHhccccceeeeccCccccCCCCCce--Eec
Confidence            4455677888842   222  234778889999999999999988999999  999

>KOG0279|consensus

Probab=87.41  E-value=0.6  Score=40.06  Aligned_cols=56  Identities=16%  Similarity=0.202  Sum_probs=43.8

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFR   65 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t   65 (118)
                      -+-+|++|.+||-+..      .+ ...--|+|-|.++.|.|...-    |.+||+  ++|  +.-.+-++
T Consensus       167 s~s~DktvKvWnl~~~------~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~--~LwdL~~~k~lys  229 (315)
T KOG0279|consen  167 SASWDKTVKVWNLRNC------QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEA--MLWDLNEGKNLYS  229 (315)
T ss_pred             EccCCceEEEEccCCc------chhhccccccccEEEEEECCCCCEEecCCCCceE--EEEEccCCceeEe
Confidence            3568999999997543      23 555669999999999999887    899999  999  55444444

>KOG0278|consensus

Probab=87.11  E-value=0.88  Score=39.09  Aligned_cols=58  Identities=21%  Similarity=0.379  Sum_probs=44.7

Q ss_pred             CCccccceEEEeehhhhcCCCCcccc-cccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCCCC
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDI-LSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHHFR   65 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~-~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P~t   65 (118)
                      ++|-||+-+.-||=.   .|+  .+. -.+-|-|||.+|.|.|-..-    ..||-|  -|| .+|.+++-
T Consensus       240 VaGged~~~~kfDy~---Tge--Ei~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTi--rlWQt~~~~~~~  303 (334)
T KOG0278|consen  240 VAGGEDFKVYKFDYN---TGE--EIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTI--RLWQTTPGKTYG  303 (334)
T ss_pred             EecCcceEEEEEecc---CCc--eeeecccCCCCceEEEEECCCCceeeccCCCceE--EEEEecCCCchh
Confidence            467788888888752   221  233 36899999999999998887    678999  999 88888773

>KOG2110|consensus

Probab=86.10  E-value=0.73  Score=40.55  Aligned_cols=76  Identities=17%  Similarity=0.211  Sum_probs=50.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehh-hhh--ccCCCCCCCCCCCCCcc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRA-HLW--RNLHHHFRVPGKKTFNL   74 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~-fIW--nn~~~P~t~PG~ks~p~   74 (118)
                      |-...|.|.|||..++.     .+.....|.|+|.+|+|||...-    ..+|-|+. |-=  ...-.-|+ =|..  +.
T Consensus       148 ~s~t~GdV~l~d~~nl~-----~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFR-RG~~--~~  219 (391)
T KOG2110|consen  148 GSTTSGDVVLFDTINLQ-----PVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFR-RGTY--PV  219 (391)
T ss_pred             CCCCCceEEEEEcccce-----eeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeee-CCce--ee
Confidence            34578999999998874     23556699999999999998776    44555511 111  11122467 5555  77


Q ss_pred             cceeeecCcce
Q psy14121         75 ILGRLGLGQSF   85 (118)
Q Consensus        75 ei~~l~~~~~~   85 (118)
                      .|-+|.+.-++
T Consensus       220 ~IySL~Fs~ds  230 (391)
T KOG2110|consen  220 SIYSLSFSPDS  230 (391)
T ss_pred             EEEEEEECCCC
Confidence            88888776654

>KOG0294|consensus

Probab=86.05  E-value=0.77  Score=40.02  Aligned_cols=71  Identities=17%  Similarity=0.157  Sum_probs=46.7

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEe--ccCCCC----CCcceehhhhh-ccC--CCCCCCCCCCCCc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDF--NKFQVV----ATNFKIRAHLW-RNL--HHHFRVPGKKTFN   73 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdF--Np~Q~N----gs~GEI~~fIW-nn~--~~P~t~PG~ks~p   73 (118)
                      |.||+.|.+||-+.+.     .+.....|.-.|+++-|  ||+..-    ++||+|  .|| -..  ..|-++.+--...
T Consensus       225 G~d~~~i~~~D~ds~~-----~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I--~vWd~~~~~k~~~~~l~e~n~~  297 (362)
T KOG0294|consen  225 GGDNEWISLKDTDSDT-----PLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFI--KVWDIDMETKKRPTLLAELNTN  297 (362)
T ss_pred             ecCCceEEEeccCCCc-----cceeeecchhheeeeEEEecCCceEEEEeccCceE--EEEEccccccCCcceeEEeecC
Confidence            6789999999986521     24888999999999885  444433    999999  999 222  2222212233335


Q ss_pred             ccceeee
Q psy14121         74 LILGRLG   80 (118)
Q Consensus        74 ~ei~~l~   80 (118)
                      ..+.||.
T Consensus       298 ~RltCl~  304 (362)
T KOG0294|consen  298 VRLTCLR  304 (362)
T ss_pred             Cccceee
Confidence            5566654

>KOG0263|consensus

Probab=85.96  E-value=1.4  Score=41.28  Aligned_cols=86  Identities=23%  Similarity=0.367  Sum_probs=58.1

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhccCCCCCCCCCCCCCcccc
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRNLHHHFRVPGKKTFNLIL   76 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn~~~P~t~PG~ks~p~ei   76 (118)
                      |-|-|||.|.+||-..     ...+.+...|+|.|-+|.|.+....    +.|..|  -+| +..+++. -|..      
T Consensus       593 aSg~ed~~I~iWDl~~-----~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV--~lW-D~~~~~~-~~~~------  657 (707)
T KOG0263|consen  593 ASGDEDGLIKIWDLAN-----GSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSV--RLW-DLTKVIE-LLNL------  657 (707)
T ss_pred             eecccCCcEEEEEcCC-----CcchhhhhcccCceeEEEEecCCCEEEecCCCCeE--EEE-Echhhcc-cccc------
Confidence            4588999999999632     1234899999999999999887777    888889  888 3333333 1000      


Q ss_pred             eeeecCcceecchhhhhhhhcccCCCcceeeEEE
Q psy14121         77 GRLGLGQSFYGNRQSTQRHRSEYNSPSLIPFYYY  110 (118)
Q Consensus        77 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (118)
                               -.+.++.+-++.|+|+-++.=.-||
T Consensus       658 ---------~~~~~~~~~~~~~~~~~~~llgs~~  682 (707)
T KOG0263|consen  658 ---------GHISTSNSAITQENNASSLLLGSFY  682 (707)
T ss_pred             ---------cccccccccccccCCCCcceeeeee
Confidence                     2344556677777766665544444

>KOG1007|consensus

Probab=85.46  E-value=0.85  Score=39.72  Aligned_cols=50  Identities=20%  Similarity=0.165  Sum_probs=42.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      -+.|||-|.|||-.+-    ...+....-|+.=|.++.|||+...     ++|+.|  -+|
T Consensus       232 t~gDdgyvriWD~R~t----k~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V--~Ls  286 (370)
T KOG1007|consen  232 TCGDDGYVRIWDTRKT----KFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAV--NLS  286 (370)
T ss_pred             EcCCCccEEEEeccCC----CccccccCCCceEEEEEEecCccceEEEecCCCcee--EEE
Confidence            4679999999998553    3456888999999999999999988     999999  888

>KOG0319|consensus

Probab=85.36  E-value=0.82  Score=43.19  Aligned_cols=47  Identities=28%  Similarity=0.430  Sum_probs=40.1

Q ss_pred             ccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC------CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV------ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N------gs~GEI~~fIW   57 (118)
                      |-.||.|.|||-+.      .-+ ...+-|-|+|.+|+|+|...-      +.|+.+  .+|
T Consensus       123 ggaD~~v~VWdi~~------~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v--~vw  176 (775)
T KOG0319|consen  123 GGADGRVKVWDIKN------GYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTV--RVW  176 (775)
T ss_pred             ccccceEEEEEeeC------CEEEEEecCCCceEEEEEeCCccchhheeecCCCceE--EEE
Confidence            45689999999732      345 899999999999999999877      899999  999

>KOG0271|consensus

Probab=85.19  E-value=1.8  Score=38.81  Aligned_cols=72  Identities=15%  Similarity=0.262  Sum_probs=52.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCCC--CCCCCCCCcc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHHF--RVPGKKTFNL   74 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P~--t~PG~ks~p~   74 (118)
                      -|..|-++.|||++-     +-.+...+-|..=|.+|+..|....    ..+|+|  .|| -+..+++  +|+|-   .-
T Consensus       132 tGsGD~TvR~WD~~T-----eTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I--~lwdpktg~~~g~~l~gH---~K  201 (480)
T KOG0271|consen  132 TGSGDTTVRLWDLDT-----ETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSI--RLWDPKTGQQIGRALRGH---KK  201 (480)
T ss_pred             ecCCCceEEeeccCC-----CCcceeecCCccEEEEEEECCCcchhhccccCCeE--EEecCCCCCcccccccCc---cc
Confidence            466778999999832     2245888999999999999999998    789999  999 3444443  22332   23


Q ss_pred             cceeeecCc
Q psy14121         75 ILGRLGLGQ   83 (118)
Q Consensus        75 ei~~l~~~~   83 (118)
                      -|.+|.|-.
T Consensus       202 ~It~Lawep  210 (480)
T KOG0271|consen  202 WITALAWEP  210 (480)
T ss_pred             ceeEEeecc
Confidence            567777753

>KOG0642|consensus

Probab=85.15  E-value=1.5  Score=40.40  Aligned_cols=78  Identities=19%  Similarity=0.270  Sum_probs=55.8

Q ss_pred             ccccceEEEeehh------hhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhhc-cCCCC--CCCCC
Q psy14121          3 GCDDGIIQMYNVD------NIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWR-NLHHH--FRVPG   68 (118)
Q Consensus         3 GlenG~I~lwdp~------kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWn-n~~~P--~t~PG   68 (118)
                      |.-||+|+.|+--      ..-+  ..++ ....-|+++|+.|.+.+-..+    .+||.+  ++|+ .-..|  |.-|=
T Consensus       362 gg~Dg~I~~w~~p~n~dp~ds~d--p~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTv--r~w~~~~~~~~~f~~~~  437 (577)
T KOG0642|consen  362 GGIDGTIRCWNLPPNQDPDDSYD--PSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTV--RLWEPTEESPCTFGEPK  437 (577)
T ss_pred             eccCceeeeeccCCCCCcccccC--cchhccceeccccceeeeeecccccceeeecCCceE--EeeccCCcCccccCCcc
Confidence            5568999999543      3221  1234 788999999999999998888    889999  9993 33467  43233


Q ss_pred             CCCCcccceeeecCcc
Q psy14121         69 KKTFNLILGRLGLGQS   84 (118)
Q Consensus        69 ~ks~p~ei~~l~~~~~   84 (118)
                      .--.|+.+.+.+|--+
T Consensus       438 e~g~Plsvd~~ss~~a  453 (577)
T KOG0642|consen  438 EHGYPLSVDRTSSRPA  453 (577)
T ss_pred             ccCCcceEeeccchhH
Confidence            3445888888888644

>KOG0269|consensus

Probab=85.15  E-value=0.63  Score=44.21  Aligned_cols=50  Identities=16%  Similarity=0.427  Sum_probs=42.7

Q ss_pred             cccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          4 CDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         4 lenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      --+|+|.+||-.+-+++  ..+.....|+-.|..|||+++.+|     +-||-|  =+|
T Consensus       107 s~nG~i~vWdlnk~~rn--k~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~v--K~~  161 (839)
T KOG0269|consen  107 STNGVISVWDLNKSIRN--KLLTVFNEHERSANKLDFHSTEPNILISGSQDGTV--KCW  161 (839)
T ss_pred             cCCCcEEEEecCccccc--hhhhHhhhhccceeeeeeccCCccEEEecCCCceE--EEE
Confidence            45899999999886443  344788899999999999999999     778999  899

>KOG0263|consensus

Probab=84.74  E-value=1.1  Score=41.94  Aligned_cols=50  Identities=26%  Similarity=0.509  Sum_probs=39.2

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.|-.|-+|++||...   |.  .+-...-|+++|-+|.|.|-..-    +.+|-|  -||
T Consensus       551 aTGSsD~tVRlWDv~~---G~--~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I--~iW  604 (707)
T KOG0263|consen  551 ATGSSDRTVRLWDVST---GN--SVRIFTGHKGPVTALAFSPCGRYLASGDEDGLI--KIW  604 (707)
T ss_pred             ccCCCCceEEEEEcCC---Cc--EEEEecCCCCceEEEEEcCCCceEeecccCCcE--EEE
Confidence            4678899999999833   32  24555669999999999996555    788889  999

>KOG0316|consensus

Probab=84.40  E-value=0.99  Score=38.47  Aligned_cols=50  Identities=18%  Similarity=0.204  Sum_probs=38.3

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccc-eeEEEeccCCCC---CCcceehhhhh
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGP-VRALDFNKFQVV---ATNFKIRAHLW   57 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGp-VraLdFNp~Q~N---gs~GEI~~fIW   57 (118)
                      ++|-|||-|-|||-   +++  ..+.+...|+++ |..|+|.|..+-   |...-+  +.|
T Consensus       243 ~sgSEDG~Vy~wdL---vd~--~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~--~~~  296 (307)
T KOG0316|consen  243 FSGSEDGKVYFWDL---VDE--TQISKLSVVSTVIVTDLSCHPTMDDFITATGHGD--LFW  296 (307)
T ss_pred             EeccCCceEEEEEe---ccc--eeeeeeccCCceeEEeeecccCccceeEecCCce--ece
Confidence            47999999999995   222  234889999999 999999999888   544444  455

>KOG0284|consensus

Probab=84.31  E-value=0.57  Score=41.90  Aligned_cols=74  Identities=16%  Similarity=0.281  Sum_probs=49.6

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCCCCCCCCCCCccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHHFRVPGKKTFNLI   75 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P~t~PG~ks~p~e   75 (118)
                      .|-.+|.|..|+|.-      ..+ .....|+.+||.|.|.|.-..    ..||-|  -|| --..++=+..  +.---+
T Consensus       155 SgD~gG~iKyWqpnm------nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~i--kiWdf~~~kee~vL--~GHgwd  224 (464)
T KOG0284|consen  155 SGDKGGMIKYWQPNM------NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTI--KIWDFRMPKEERVL--RGHGWD  224 (464)
T ss_pred             EcCCCceEEecccch------hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeE--EEEeccCCchhhee--ccCCCC
Confidence            366789999999942      123 444556699999999994444    788999  999 2223332111  234578


Q ss_pred             ceeeecCcce
Q psy14121         76 LGRLGLGQSF   85 (118)
Q Consensus        76 i~~l~~~~~~   85 (118)
                      ++|++|--.+
T Consensus       225 VksvdWHP~k  234 (464)
T KOG0284|consen  225 VKSVDWHPTK  234 (464)
T ss_pred             cceeccCCcc
Confidence            9999997654

>KOG0290|consensus

Probab=83.94  E-value=1.7  Score=37.92  Aligned_cols=56  Identities=11%  Similarity=0.145  Sum_probs=44.2

Q ss_pred             ccccccccccceeEEEeccCCCC-----CCcceehhhhh--c-----cCCCCCCCCCCCCCcccceeeecCcc
Q psy14121         24 VDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--R-----NLHHHFRVPGKKTFNLILGRLGLGQS   84 (118)
Q Consensus        24 ~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--n-----n~~~P~t~PG~ks~p~ei~~l~~~~~   84 (118)
                      .+++.+.|.+.|.++..-|...+     |.|.+.  .||  .     +...|+.   .-+.-.||.-|.|+-+
T Consensus       279 pva~L~~H~a~VNgIaWaPhS~~hictaGDD~qa--liWDl~q~~~~~~~dPil---ay~a~~EVNqi~Ws~~  346 (364)
T KOG0290|consen  279 PVARLRNHQASVNGIAWAPHSSSHICTAGDDCQA--LIWDLQQMPRENGEDPIL---AYTAGGEVNQIQWSSS  346 (364)
T ss_pred             ceehhhcCcccccceEecCCCCceeeecCCcceE--EEEecccccccCCCCchh---hhhccceeeeeeeccc
Confidence            35899999999999999999999     889999  999  2     3345654   2335678888888754

>KOG4378|consensus

Probab=83.79  E-value=0.84  Score=42.18  Aligned_cols=49  Identities=24%  Similarity=0.460  Sum_probs=41.5

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      +-++|.|.|||..    |.+.-..-.+.|+.|.+++-|.|-++-     |-|-.|  +|+
T Consensus       183 asd~G~VtlwDv~----g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki--~~y  236 (673)
T KOG4378|consen  183 ASDKGAVTLWDVQ----GMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKI--NIY  236 (673)
T ss_pred             eccCCeEEEEecc----CCCcccchhhhccCCcCcceecCCccceEEEecccceE--EEe
Confidence            4689999999984    333344778899999999999999988     999999  999

>KOG0267|consensus

Probab=83.17  E-value=0.69  Score=43.84  Aligned_cols=50  Identities=18%  Similarity=0.476  Sum_probs=41.0

Q ss_pred             CCccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         1 aGGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      +.|..+|+|.|||-+.     ...+....-|.-.+-.|||+|+-.-    ..+..+  .||
T Consensus        86 aagsasgtiK~wDlee-----Ak~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~--~iw  139 (825)
T KOG0267|consen   86 AAGSASGTIKVWDLEE-----AKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDL--KIW  139 (825)
T ss_pred             cccccCCceeeeehhh-----hhhhhhhhccccCcceeeeccceEEeccccccccc--eeh
Confidence            4678899999999752     1234678889999999999999776    789999  999

>KOG1332|consensus

Probab=82.37  E-value=1.4  Score=37.58  Aligned_cols=51  Identities=25%  Similarity=0.462  Sum_probs=41.1

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEe-ccCCCC-----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDF-NKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdF-Np~Q~N-----gs~GEI~~fIW   57 (118)
                      .+.||+|.++...+  ++.+..++.+.-|+|||-.+.| +|.+-+     .-+|.|  .||
T Consensus        29 csSD~tVkIf~v~~--n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkV--IiW   85 (299)
T KOG1332|consen   29 CSSDGTVKIFEVRN--NGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKV--IIW   85 (299)
T ss_pred             ecCCccEEEEEEcC--CCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceE--EEE
Confidence            46799999998754  2333455999999999999998 778877     679999  999

>KOG0321|consensus

Probab=82.25  E-value=0.7  Score=43.25  Aligned_cols=48  Identities=23%  Similarity=0.378  Sum_probs=38.7

Q ss_pred             ccccceEEEeehhhhcCCCCcccc--cccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDI--LSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~--~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      +..|-+|.+||.+.     +..+.  ...-|+|.|++..|-|+.++     +-||||  .||
T Consensus       118 asGDsT~r~Wdvk~-----s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~i--llW  172 (720)
T KOG0321|consen  118 ASGDSTIRPWDVKT-----SRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEI--LLW  172 (720)
T ss_pred             ccCCceeeeeeecc-----ceeecceeecccccccchhhhccCCCcceeeccCCCcE--EEE
Confidence            45677899999832     12223  47889999999999999999     999999  999

>KOG0306|consensus

Probab=82.06  E-value=1.3  Score=42.31  Aligned_cols=62  Identities=26%  Similarity=0.499  Sum_probs=45.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhccCC--CCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRNLH--HHFRVPGKK   70 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn~~--~P~t~PG~k   70 (118)
                      =|-+||+|+|||-..   +  ..+....-|.-+|..|+|.....-    +.|++|  -+|.-..  -=|++-|-+
T Consensus        82 VGYaDGsVqif~~~s---~--~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~I--IvwDlV~E~Gl~rL~GHk  149 (888)
T KOG0306|consen   82 VGYADGSVQIFSLES---E--EILITFNGHKAAVTTLKFDKIGTRLASGSKDTDI--IVWDLVGEEGLFRLRGHK  149 (888)
T ss_pred             EEecCceEEeeccCC---C--ceeeeecccccceEEEEEcccCceEeecCCCccE--EEEEeccceeeEEeecch
Confidence            377999999998631   1  234788889999999999988777    889999  9993332  235544533

>KOG0272|consensus

Probab=82.00  E-value=1.5  Score=39.26  Aligned_cols=72  Identities=15%  Similarity=0.266  Sum_probs=52.4

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCC-C-C----CCcceehhhhh-ccCCCCCCCCCC-CCCcc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ-V-V----ATNFKIRAHLW-RNLHHHFRVPGK-KTFNL   74 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q-~-N----gs~GEI~~fIW-nn~~~P~t~PG~-ks~p~   74 (118)
                      |.=+|.+.||+....     ..+....-|++-|-+++|.|.- . +    +.||-+  -|| -+-++|.-   . .--..
T Consensus       193 ~swsG~~kvW~~~~~-----~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtv--klw~~~~e~~l~---~l~gH~~  262 (459)
T KOG0272|consen  193 GSWSGLVKVWSVPQC-----NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTV--KLWKLSQETPLQ---DLEGHLA  262 (459)
T ss_pred             eecCCceeEeecCCc-----ceeEEEeccccceeeEEEccCCCccceeeeccCCce--eeeccCCCcchh---hhhcchh
Confidence            445799999998665     1348889999999999999994 3 3    899999  999 44445532   1 11246


Q ss_pred             cceeeecCcc
Q psy14121         75 ILGRLGLGQS   84 (118)
Q Consensus        75 ei~~l~~~~~   84 (118)
                      ++..|.|..|
T Consensus       263 RVs~VafHPs  272 (459)
T KOG0272|consen  263 RVSRVAFHPS  272 (459)
T ss_pred             hheeeeecCC
Confidence            6777877765

>KOG0973|consensus

Probab=81.26  E-value=1.8  Score=41.85  Aligned_cols=54  Identities=20%  Similarity=0.405  Sum_probs=41.1

Q ss_pred             cccceEEEeehhhhcCCCC-------cccccccccccceeEEEeccCCCC----CCcceehhhhh-ccC
Q psy14121          4 CDDGIIQMYNVDNIMSGDN-------KVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNL   60 (118)
Q Consensus         4 lenG~I~lwdp~kIL~g~~-------~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~   60 (118)
                      +|.|.+ +|+.+-+++..+       ..+.++..|.|+|.++-|.|....    +.|.=|  .|| .++
T Consensus        35 ~d~~~~-iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v--~iW~~~~  100 (942)
T KOG0973|consen   35 LDGGIV-IWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLV--MIWERAE  100 (942)
T ss_pred             ccccce-eeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceE--EEeeecc
Confidence            555544 999999996421       123899999999999999998888    445557  999 554

>KOG1036|consensus

Probab=80.77  E-value=3  Score=36.04  Aligned_cols=102  Identities=21%  Similarity=0.316  Sum_probs=69.0

Q ss_pred             ccccceEEEeehhh-hcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh--ccCCCCCCCCCCCCCcccce
Q psy14121          3 GCDDGIIQMYNVDN-IMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW--RNLHHHFRVPGKKTFNLILG   77 (118)
Q Consensus         3 GlenG~I~lwdp~k-IL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei~   77 (118)
                      |-=|++|.||||.. -..+       ...-.+.|-++|.+-..=-  .++.++  +||  .|...||. -=..+...++-
T Consensus       112 gsWD~~ik~wD~R~~~~~~-------~~d~~kkVy~~~v~g~~LvVg~~~r~v--~iyDLRn~~~~~q-~reS~lkyqtR  181 (323)
T KOG1036|consen  112 GSWDKTIKFWDPRNKVVVG-------TFDQGKKVYCMDVSGNRLVVGTSDRKV--LIYDLRNLDEPFQ-RRESSLKYQTR  181 (323)
T ss_pred             cccCccEEEEecccccccc-------ccccCceEEEEeccCCEEEEeecCceE--EEEEcccccchhh-hccccceeEEE
Confidence            44478999999973 1111       1111227888887653222  788899  999  99999995 33455688999


Q ss_pred             eeecCcceecchhhhhhhhc--ccCCCc----ceeeEEEecCC
Q psy14121         78 RLGLGQSFYGNRQSTQRHRS--EYNSPS----LIPFYYYCNNK  114 (118)
Q Consensus        78 ~l~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~  114 (118)
                      ||.+..+.+|-+.|.-.=|-  ||--++    -.-|-+-|..+
T Consensus       182 ~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~  224 (323)
T KOG1036|consen  182 CVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRL  224 (323)
T ss_pred             EEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeec
Confidence            99999999998888766663  555555    45566666433

>KOG0282|consensus

Probab=80.67  E-value=1.6  Score=39.50  Aligned_cols=49  Identities=20%  Similarity=0.384  Sum_probs=40.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      -|-.+|.|.+||=.-.     ..+.+.+.|+++|-++++.|..++     +-+|.|  .||
T Consensus       449 SGdsdG~v~~wdwkt~-----kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~I--kiw  502 (503)
T KOG0282|consen  449 SGDSDGKVNFWDWKTT-----KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLI--KIW  502 (503)
T ss_pred             eecCCccEEEeechhh-----hhhhccccCCcceEEEEecCCCcceeEecccCcee--Eec
Confidence            3567899999985321     123889999999999999999998     899999  999

>KOG0303|consensus

Probab=80.40  E-value=2.8  Score=37.64  Aligned_cols=77  Identities=9%  Similarity=0.181  Sum_probs=56.4

Q ss_pred             CCccccceEEEee-hhhhcCCC-CcccccccccccceeEEEeccCCCC-----CCcceehhhhh-ccCCC-CCCCCCCCC
Q psy14121          1 MGGCDDGIIQMYN-VDNIMSGD-NKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW-RNLHH-HFRVPGKKT   71 (118)
Q Consensus         1 aGGlenG~I~lwd-p~kIL~g~-~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW-nn~~~-P~t~PG~ks   71 (118)
                      |.|.||-+|.||. |+..|.-+ .+.+..+.-|+-.|--+++.|-..|     |.|-.|  .|| -.+.. -.+ ..   
T Consensus        98 ASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v--~iWnv~tgeali~-l~---  171 (472)
T KOG0303|consen   98 ASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV--SIWNVGTGEALIT-LD---  171 (472)
T ss_pred             ecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE--EEEeccCCceeee-cC---
Confidence            5688999999997 55555432 3345778889999999999999999     888999  999 33333 344 21   


Q ss_pred             CcccceeeecCc
Q psy14121         72 FNLILGRLGLGQ   83 (118)
Q Consensus        72 ~p~ei~~l~~~~   83 (118)
                      -|..|-++.||+
T Consensus       172 hpd~i~S~sfn~  183 (472)
T KOG0303|consen  172 HPDMVYSMSFNR  183 (472)
T ss_pred             CCCeEEEEEecc
Confidence            677777777765

>KOG0265|consensus

Probab=80.11  E-value=2  Score=37.20  Aligned_cols=49  Identities=31%  Similarity=0.343  Sum_probs=39.9

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.-|-.|-|||.    .|+.+.....+-|+|+|-.|+|++....    ++|--|  ..|
T Consensus        65 gG~Dr~I~LWnv----~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v--~~w  117 (338)
T KOG0265|consen   65 GGSDRAIVLWNV----YGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTV--RGW  117 (338)
T ss_pred             cCCcceEEEEec----cccccceeeeccccceeEeeeeccCCCEEEEecCCceE--EEE
Confidence            445678999987    3444455778899999999999999988    888888  888

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	118
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	2e-05

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 2   GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ 44
           G  D+G +++Y+ +   +  N +      HS  V+ + FN  Q
Sbjct: 84  GALDNGSLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQ 125

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	118
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	97.85
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	97.8
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	97.6
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	97.55
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	97.54
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	97.36
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	97.31
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	97.29
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	97.28
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	97.22
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	97.15
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	97.13
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	97.1
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	97.08
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	97.06
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	97.05
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	97.04
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	97.02
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	97.01
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	97.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	96.99
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	96.99
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	96.96
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	96.96
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	96.94
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	96.94
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	96.93
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	96.92
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	96.9
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	96.89
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	96.89
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	96.86
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	96.86
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	96.85
3ow8_A	321	WD repeat-containing protein 61; structural genomi	96.83
2pm7_B	297	Protein transport protein SEC13, protein transport	96.83
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	96.83
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	96.8
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	96.79
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	96.77
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	96.76
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	96.76
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	96.72
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	96.7
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	96.69
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	96.69
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	96.67
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	96.66
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	96.65
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	96.64
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	96.63
3jrp_A	379	Fusion protein of protein transport protein SEC13	96.63
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	96.58
3jrp_A	379	Fusion protein of protein transport protein SEC13	96.55
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	96.52
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	96.47
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	96.47
3jro_A	753	Fusion protein of protein transport protein SEC13	96.47
2pm7_B	297	Protein transport protein SEC13, protein transport	96.47
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	96.47
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	96.46
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	96.46
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	96.44
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	96.42
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	96.41
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	96.39
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	96.39
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	96.38
3ow8_A	321	WD repeat-containing protein 61; structural genomi	96.38
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	96.36
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	96.33
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	96.32
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	96.31
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	96.25
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	96.25
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	96.25
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	96.23
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	96.21
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	96.21
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	96.2
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	96.16
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	96.15
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	96.14
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	96.12
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	96.11
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	96.06
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	96.06
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	96.05
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	96.04
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	96.04
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	96.01
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	96.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	95.91
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	95.91
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	95.9
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	95.74
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	95.74
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	95.71
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	95.66
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	95.65
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	95.57
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	95.49
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	95.46
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	95.41
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	95.4
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	95.35
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	95.14
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	95.01
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	94.92
3jro_A	753	Fusion protein of protein transport protein SEC13	94.92
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	94.87
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	94.84
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	94.46
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	94.42
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	94.36
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	94.2
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	93.84
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	93.78
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	93.73
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	93.72
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	93.54
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	92.94
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	92.48
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	92.16
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	90.34
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	89.34
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	87.84
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	86.48
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	86.32

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=97.85  E-value=8e-06  Score=62.68  Aligned_cols=61  Identities=11%  Similarity=0.096  Sum_probs=42.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhhccCCCCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLWRNLHHHFRVPGKK   70 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIWnn~~~P~t~PG~k   70 (118)
                      .|.+||+|.|||...      ..+.+...|+++|.+|.|+|....     +.||.|  .+|+-+..|..-||.+
T Consensus       275 sgs~D~~i~vwd~~~------~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v--~~w~v~~~~~~~p~p~  340 (344)
T 4gqb_B          275 SLSEDCSLAVLDSSL------SELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQV--VHHVVPTEPLPAPGPA  340 (344)
T ss_dssp             EEETTSCEEEECTTC------CEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCE--EEEECCC---------
T ss_pred             EEeCCCeEEEEECCC------CcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeE--EEEECCCCCCCCCCCC
Confidence            467899999999632      235667889999999999998876     679999  9996555655435544

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=97.80  E-value=3.4e-05  Score=56.81  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=56.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCC------CCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLH------HHFRVPG   68 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~------~P~t~PG   68 (118)
                      .|.+||.|.|||......+. ..+.....|+++|.+|.|+|...+     +.+|.|  .||  ....      .++. ++
T Consensus        84 ~~~~dg~v~vw~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v--~iwd~~~~~~~~~~~~~~~-~~  159 (416)
T 2pm9_A           84 GALDNGSLELYSTNEANNAI-NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEI--FIWDMNKCTESPSNYTPLT-PG  159 (416)
T ss_dssp             EEESSSCEEEECCSSTTSCC-CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCE--EBCBTTTTSSCTTTCCCBC-CC
T ss_pred             EEccCCeEEEeecccccccc-cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeE--EEEECCCCccccccccccc-cc
Confidence            46789999999987644332 234777889999999999998555     789999  999  4444      4555 32


Q ss_pred             C-CCCcccceeeecCcc
Q psy14121         69 K-KTFNLILGRLGLGQS   84 (118)
Q Consensus        69 ~-ks~p~ei~~l~~~~~   84 (118)
                      . ......+.+|.|...
T Consensus       160 ~~~~~~~~v~~~~~~~~  176 (416)
T 2pm9_A          160 QSMSSVDEVISLAWNQS  176 (416)
T ss_dssp             CSCCSSCCCCEEEECSS
T ss_pred             cccCCCCCeeEEEeCCC
Confidence            2 233557788888654

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=97.60  E-value=3e-05  Score=59.78  Aligned_cols=51  Identities=22%  Similarity=0.257  Sum_probs=40.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      -|.+||.|.|||.+.   ++...+.+...|+++|.+|.|+|...+     +.||.|  .||
T Consensus       137 sGs~dg~i~lWd~~~---~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v--~iw  192 (435)
T 4e54_B          137 VGSKGGDIMLWNFGI---KDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT--RLQ  192 (435)
T ss_dssp             EEETTSCEEEECSSC---CSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE--EEE
T ss_pred             EEeCCCEEEEEECCC---CCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE--EEe
Confidence            478999999999742   222223667789999999999998877     789999  999

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=97.55  E-value=5.4e-05  Score=54.17  Aligned_cols=75  Identities=13%  Similarity=0.093  Sum_probs=50.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh-ccCCCC-CCCCCCCCCcc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW-RNLHHH-FRVPGKKTFNL   74 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW-nn~~~P-~t~PG~ks~p~   74 (118)
                      .|.+||.|.|||.+.   +  ..+.....|+++|.+|.|+|...+     +.+|.|  .|| -...++ ..+........
T Consensus        90 ~~~~dg~i~v~d~~~---~--~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i--~iwd~~~~~~~~~~~~~~~~~~  162 (366)
T 3k26_A           90 VAGSRGIIRIINPIT---M--QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHAL--RLWNIQTDTLVAIFGGVEGHRD  162 (366)
T ss_dssp             EEETTCEEEEECTTT---C--CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCE--EEEETTTTEEEEEECSTTSCSS
T ss_pred             EecCCCEEEEEEchh---c--eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeE--EEEEeecCeEEEEecccccccC
Confidence            467899999999853   1  234667789999999999996555     679999  999 222222 22111123455


Q ss_pred             cceeeecCc
Q psy14121         75 ILGRLGLGQ   83 (118)
Q Consensus        75 ei~~l~~~~   83 (118)
                      .+.+|.|..
T Consensus       163 ~v~~~~~~~  171 (366)
T 3k26_A          163 EVLSADYDL  171 (366)
T ss_dssp             CEEEEEECT
T ss_pred             ceeEEEECC
Confidence            677787754

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=97.54  E-value=3.9e-05  Score=58.31  Aligned_cols=48  Identities=10%  Similarity=0.097  Sum_probs=38.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||+|.|||.+.      ..+.+...|+++|.+|+|+|....     +.||.|  .||
T Consensus       287 sgs~D~~i~iwd~~~------~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v--~iW  339 (357)
T 4g56_B          287 SISEDCTVAVLDADF------SEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKV--LHH  339 (357)
T ss_dssp             EEETTSCEEEECTTS------CEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCE--EEE
T ss_pred             EEeCCCEEEEEECCC------CcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeE--EEE
Confidence            467899999999742      234455689999999999997665     789999  999

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=97.36  E-value=0.00028  Score=54.30  Aligned_cols=48  Identities=21%  Similarity=0.308  Sum_probs=40.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.+    +  ..+.....|+++|.+|.|+|..++     +.|+.|  .||
T Consensus       226 ~g~~dg~i~~wd~~----~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v--~iw  278 (435)
T 4e54_B          226 TGDNVGNVILLNMD----G--KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTV--KIW  278 (435)
T ss_dssp             EECSSSBEEEEESS----S--CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBC--CEE
T ss_pred             EEeCCCcEeeeccC----c--ceeEEEecccceEEeeeecCCCceEEEEecCccee--eEE
Confidence            46789999999963    2  234677889999999999999887     578999  999

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=97.31  E-value=0.00021  Score=50.50  Aligned_cols=49  Identities=16%  Similarity=0.217  Sum_probs=40.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      +|.+||.|.|||...   +  ..+...+-|+++|.+|.|+|...-    +.||.|  .||
T Consensus       259 sg~~d~~i~iwd~~~---~--~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v--~iW  311 (318)
T 4ggc_A          259 HGFAQNQLVIWKYPT---M--AKVAELKGHTSRVLSLTMSPDGATVASAAADETL--RLW  311 (318)
T ss_dssp             ECTTTCCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEE--EEE
T ss_pred             EEcCCCEEEEEECCC---C--cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeE--EEE
Confidence            467899999999753   1  234777889999999999997766    789999  999

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=97.29  E-value=0.00033  Score=51.93  Aligned_cols=49  Identities=12%  Similarity=0.164  Sum_probs=38.2

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccc-cccceeEEEeccCCCC---CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKK-HSGPVRALDFNKFQVV---ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~K-HtGpVraLdFNp~Q~N---gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...-     ..+ ...+. |.++|.+|.|+|....   ++++.|  .||
T Consensus       187 sg~~dg~i~iwd~~~~-----~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v--~iw  240 (343)
T 3lrv_A          187 LYSPDGILDVYNLSSP-----DQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTV--VCF  240 (343)
T ss_dssp             EECTTSCEEEEESSCT-----TSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBE--EEE
T ss_pred             EEcCCCEEEEEECCCC-----CCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeE--EEE
Confidence            4679999999998531     122 45555 9999999999997766   667799  999

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=97.28  E-value=0.00018  Score=57.34  Aligned_cols=77  Identities=12%  Similarity=0.088  Sum_probs=52.1

Q ss_pred             CccccceEEEeehhhhcCCCCc---c---cccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNK---V---DILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHFRVPG   68 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~---~---l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~t~PG   68 (118)
                      .|.+||.|.|||.+....+...   .   +...+.|+++|.+|.|+|...+     +.+|.|  .||  +.....+.   
T Consensus       113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v--~iwD~~~~~~~~~---  187 (434)
T 2oit_A          113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI--AVLQVTETVKVCA---  187 (434)
T ss_dssp             ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE--EEEEESSSEEEEE---
T ss_pred             ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE--EEEEcCCCcceee---
Confidence            4678999999999887544211   1   2445569999999999999766     789999  999  33222222   


Q ss_pred             CCCCcccceeeecCc
Q psy14121         69 KKTFNLILGRLGLGQ   83 (118)
Q Consensus        69 ~ks~p~ei~~l~~~~   83 (118)
                      .......+.||.|..
T Consensus       188 ~~~~~~~v~~v~wsp  202 (434)
T 2oit_A          188 TLPSTVAVTSVCWSP  202 (434)
T ss_dssp             EECGGGCEEEEEECT
T ss_pred             ccCCCCceeEEEEcC
Confidence            111234677788763

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=97.22  E-value=0.00026  Score=54.21  Aligned_cols=49  Identities=18%  Similarity=0.331  Sum_probs=40.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      -|.+||+|.|||.+.     ...+....-|+++|.++.|+|...+     +.|+.|  .||
T Consensus       144 sgs~d~~i~iwd~~~-----~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v--~iw  197 (344)
T 4gqb_B          144 SGSKDICIKVWDLAQ-----QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRI--LLW  197 (344)
T ss_dssp             EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEECCC-----CcEEEEEcCcCCceEEEEecCCCCCceeeecccccc--ccc
Confidence            367899999999853     1234777889999999999999877     678999  999

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=97.15  E-value=0.0002  Score=50.52  Aligned_cols=47  Identities=13%  Similarity=0.275  Sum_probs=37.0

Q ss_pred             cceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          6 DGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         6 nG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |++|.|||++.   |+...+.+...|.+.|.+|.|+|....    +.||.|  .||
T Consensus        44 D~tV~iWd~~t---g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v--~iw   94 (318)
T 4ggc_A           44 DNSVYLWSASS---GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV--QLW   94 (318)
T ss_dssp             TTEEEEEETTT---CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             CCEEEEEECCC---CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcE--EEe
Confidence            78999999853   221122566789999999999998776    789999  999

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=97.13  E-value=0.00021  Score=54.64  Aligned_cols=72  Identities=11%  Similarity=0.214  Sum_probs=47.5

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCC-CCCCCCCCCcccc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHH-FRVPGKKTFNLIL   76 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P-~t~PG~ks~p~ei   76 (118)
                      |+ |++|.|||++.   |+-..+.+...|.+.|.+|.|+|...-    +.+|.|  .|| -...++ .++.|   ....+
T Consensus       122 gl-d~tV~lWd~~t---g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v--~iWd~~~~~~~~~~~~---h~~~v  192 (420)
T 4gga_A          122 AL-DNSVYLWSASS---GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV--QLWDVQQQKRLRNMTS---HSARV  192 (420)
T ss_dssp             EE-TTEEEEEETTT---CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCE--EEEETTTTEEEEEECC---CSSCE
T ss_pred             Ee-CCEEEEEECCC---CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeE--EEEEcCCCcEEEEEeC---CCCce
Confidence            45 78999999852   221123566789999999999997665    789999  999 222222 22122   23456


Q ss_pred             eeeecCc
Q psy14121         77 GRLGLGQ   83 (118)
Q Consensus        77 ~~l~~~~   83 (118)
                      .|+.|+.
T Consensus       193 ~~~s~~~  199 (420)
T 4gga_A          193 GSLSWNS  199 (420)
T ss_dssp             EEEEEET
T ss_pred             EEEeeCC
Confidence            6777754

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=97.10  E-value=0.0007  Score=51.34  Aligned_cols=49  Identities=18%  Similarity=0.245  Sum_probs=40.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      -|..||.|.|||...     ...+...+.|+++|.+|.|+|....     +.+|.|  .||
T Consensus       156 sgs~dg~v~iwd~~~-----~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v--~~w  209 (357)
T 4g56_B          156 SGGKDFSVKVWDLSQ-----KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRI--LLW  209 (357)
T ss_dssp             EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCE--EEC
T ss_pred             EEeCCCeEEEEECCC-----CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCce--EEE
Confidence            367899999999753     1234777889999999999998876     788999  999

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=97.08  E-value=0.00021  Score=50.92  Aligned_cols=71  Identities=10%  Similarity=0.195  Sum_probs=49.3

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCCCCCCCCCCCccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHHFRVPGKKTFNLI   75 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P~t~PG~ks~p~e   75 (118)
                      .|.+||.|.|||.+.    ....+ .....|.++|.+|.|+|....    +.+|.|  .|| -....+..   .......
T Consensus        59 ~~~~dg~i~iw~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v--~iwd~~~~~~~~---~~~~~~~  129 (368)
T 3mmy_A           59 AGSWANDVRCWEVQD----SGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTA--KMWDLSSNQAIQ---IAQHDAP  129 (368)
T ss_dssp             EEETTSEEEEEEECT----TSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE--EEEETTTTEEEE---EEECSSC
T ss_pred             EECCCCcEEEEEcCC----CCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcE--EEEEcCCCCcee---eccccCc
Confidence            467899999999853    11233 677789999999999996555    779999  999 22223322   1223456


Q ss_pred             ceeeec
Q psy14121         76 LGRLGL   81 (118)
Q Consensus        76 i~~l~~   81 (118)
                      +.++.|
T Consensus       130 v~~~~~  135 (368)
T 3mmy_A          130 VKTIHW  135 (368)
T ss_dssp             EEEEEE
T ss_pred             eEEEEE
Confidence            777777

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=97.06  E-value=0.00035  Score=52.28  Aligned_cols=54  Identities=19%  Similarity=0.337  Sum_probs=39.3

Q ss_pred             CccccceEEEeehhhhcCCCCcc--c--ccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKV--D--ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~--l--~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.+.--......  +  .....|++.|.+|.|+|..+.     +.||.|  .||
T Consensus       269 s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v--~~W  331 (345)
T 3fm0_A          269 TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV--AFW  331 (345)
T ss_dssp             EEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcE--EEE
Confidence            36789999999975422111111  1  234679999999999998875     789999  999

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=97.05  E-value=0.00025  Score=52.44  Aligned_cols=51  Identities=18%  Similarity=0.245  Sum_probs=38.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...   +......+...|+++|.+|.|+|...+     +.+|.|  .||
T Consensus        91 s~~~dg~i~iwd~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i--~iw  146 (383)
T 3ei3_B           91 VGSKGGDIILWDYDV---QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT--TLR  146 (383)
T ss_dssp             EEEBTSCEEEEETTS---TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE--EEE
T ss_pred             EEcCCCeEEEEeCCC---cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE--EEE
Confidence            467899999999863   111112444579999999999996555     788999  999

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=97.04  E-value=0.00056  Score=50.81  Aligned_cols=49  Identities=16%  Similarity=0.282  Sum_probs=39.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||...   +  ..+.....|+++|.+|.|+|....    +.++.|  .||
T Consensus        93 s~s~D~~v~lwd~~~---~--~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i--~~w  145 (343)
T 2xzm_R           93 SSSWDKTLRLWDLRT---G--TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREI--KLW  145 (343)
T ss_dssp             EEETTSEEEEEETTS---S--CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCE--EEE
T ss_pred             EEcCCCcEEEEECCC---C--cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEE--EEE
Confidence            366899999999743   1  223667789999999999997766    789999  999

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=97.02  E-value=0.00042  Score=51.39  Aligned_cols=71  Identities=10%  Similarity=0.212  Sum_probs=48.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI   75 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e   75 (118)
                      .|..||.|.|||.+.   +  ........|.++|.+|.|+|....    +.+|.|  .||  .......++.   .....
T Consensus       114 ~~~~dg~i~iwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i--~iwd~~~~~~~~~~~---~h~~~  183 (420)
T 3vl1_A          114 LGTTEGDIKVLDSNF---N--LQREIDQAHVSEITKLKFFPSGEALISSSQDMQL--KIWSVKDGSNPRTLI---GHRAT  183 (420)
T ss_dssp             EEETTSCEEEECTTS---C--EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEE--EEEETTTCCCCEEEE---CCSSC
T ss_pred             EEECCCCEEEEeCCC---c--ceeeecccccCccEEEEECCCCCEEEEEeCCCeE--EEEeCCCCcCceEEc---CCCCc
Confidence            367899999999742   1  123556789999999999997655    778999  999  3333333321   23345


Q ss_pred             ceeeecC
Q psy14121         76 LGRLGLG   82 (118)
Q Consensus        76 i~~l~~~   82 (118)
                      +.+|.|.
T Consensus       184 v~~~~~~  190 (420)
T 3vl1_A          184 VTDIAII  190 (420)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEc
Confidence            6677774

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=97.01  E-value=0.00036  Score=52.47  Aligned_cols=79  Identities=10%  Similarity=0.119  Sum_probs=51.4

Q ss_pred             CccccceEEEeehhhhcCCC--CcccccccccccceeEEEeccCCCC-----CCcceehhhhh-ccCCCC-CCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGD--NKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW-RNLHHH-FRVPGKKTF   72 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~--~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW-nn~~~P-~t~PG~ks~   72 (118)
                      .|.+||.|.|||...--...  ...+.....|.++|.+|.|+|...+     +.+|.|  .|| -...++ .++ .....
T Consensus        99 s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i--~iwd~~~~~~~~~~-~~~~~  175 (402)
T 2aq5_A           99 SGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVI--LVWDVGTGAAVLTL-GPDVH  175 (402)
T ss_dssp             EEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCE--EEEETTTTEEEEEE-CTTTC
T ss_pred             EEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEE--EEEECCCCCccEEE-ecCCC
Confidence            46789999999975421000  1234677789999999999999866     789999  999 222222 221 00223


Q ss_pred             cccceeeecCc
Q psy14121         73 NLILGRLGLGQ   83 (118)
Q Consensus        73 p~ei~~l~~~~   83 (118)
                      ...+.+|.|..
T Consensus       176 ~~~v~~~~~~~  186 (402)
T 2aq5_A          176 PDTIYSVDWSR  186 (402)
T ss_dssp             CSCEEEEEECT
T ss_pred             CCceEEEEECC
Confidence            45677888753

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=97.00  E-value=0.00037  Score=51.87  Aligned_cols=49  Identities=14%  Similarity=0.206  Sum_probs=39.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||..+   +  ..+.....|+++|.+|.|+|....    +.||.|  .||
T Consensus       287 ~g~~d~~i~vwd~~~---~--~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i--~iW  339 (340)
T 1got_B          287 AGYDDFNCNVWDALK---A--DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL--KIW  339 (340)
T ss_dssp             EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE--EEE
T ss_pred             EECCCCeEEEEEccc---C--cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccE--Eec
Confidence            477899999999743   1  233667789999999999997766    789999  999

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=96.99  E-value=0.00041  Score=53.01  Aligned_cols=49  Identities=16%  Similarity=0.257  Sum_probs=40.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      +|.+||.|.|||....     ..+...+-|+++|.+|.|+|...-    +.|+-|  .||
T Consensus       339 sg~~d~~I~iwd~~~~-----~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tv--riW  391 (420)
T 4gga_A          339 HGFAQNQLVIWKYPTM-----AKVAELKGHTSRVLSLTMSPDGATVASAAADETL--RLW  391 (420)
T ss_dssp             ECTTTCCEEEEETTTC-----CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEE--EEE
T ss_pred             EecCCCEEEEEECCCC-----cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeE--EEE
Confidence            4678999999997532     234777889999999999998776    789999  999

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=96.99  E-value=0.0004  Score=52.32  Aligned_cols=54  Identities=20%  Similarity=0.320  Sum_probs=40.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      -|.+||+|.|||......+........-.|+++|.+|.|+|....    +.+|.|  .||
T Consensus        81 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i--~vw  138 (437)
T 3gre_A           81 TGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQI--IVL  138 (437)
T ss_dssp             EEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEE--EEE
Confidence            367899999999988665542212222259999999999995554    788999  999

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=96.96  E-value=0.00063  Score=52.42  Aligned_cols=75  Identities=19%  Similarity=0.314  Sum_probs=52.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCCC-CCCCCCCc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHFR-VPGKKTFN   73 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~t-~PG~ks~p   73 (118)
                      .|.+||.|.+||...--  ....+.....|.++|++|.|+|..++     +.+|.|  .||  .+...|.. +.+   ..
T Consensus       249 s~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v--~vwd~~~~~~~~~~~~~---h~  321 (430)
T 2xyi_A          249 SVADDQKLMIWDTRNNN--TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV--ALWDLRNLKLKLHSFES---HK  321 (430)
T ss_dssp             EEETTSEEEEEETTCSC--SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEE--EEEETTCTTSCSEEEEC---CS
T ss_pred             EEeCCCeEEEEECCCCC--CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeE--EEEeCCCCCCCeEEeec---CC
Confidence            36789999999986421  01233566789999999999999887     788999  999  55555532 111   24


Q ss_pred             ccceeeecCc
Q psy14121         74 LILGRLGLGQ   83 (118)
Q Consensus        74 ~ei~~l~~~~   83 (118)
                      ..+.+|.|..
T Consensus       322 ~~v~~i~~sp  331 (430)
T 2xyi_A          322 DEIFQVQWSP  331 (430)
T ss_dssp             SCEEEEEECS
T ss_pred             CCEEEEEECC
Confidence            4677888854

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=96.96  E-value=0.00031  Score=50.03  Aligned_cols=53  Identities=15%  Similarity=0.125  Sum_probs=39.0

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.+||+|.|||...--..........+-|+++|.+|.|+|...-    +.++.|  .+|
T Consensus        57 ~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i--~~~  113 (340)
T 4aow_A           57 ASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL--RLW  113 (340)
T ss_dssp             EETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc--eEE
Confidence            56899999999754211111112566789999999999997665    789999  899

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=96.94  E-value=0.00012  Score=56.23  Aligned_cols=54  Identities=15%  Similarity=0.194  Sum_probs=38.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCC-------C-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQV-------V-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~-------N-----gs~GEI~~fIW   57 (118)
                      .|.+|++|.|||.+.--......+...+-|++.|.+|+|+|...       +     +.|+.|  -||
T Consensus       106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv--~~W  171 (393)
T 4gq1_A          106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTL--IIW  171 (393)
T ss_dssp             EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEE--EEE
T ss_pred             EEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeE--EEE
Confidence            47789999999975310000011256788999999999998532       2     789999  999

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=96.94  E-value=0.00063  Score=50.55  Aligned_cols=70  Identities=17%  Similarity=0.209  Sum_probs=47.3

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCcccc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLIL   76 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei   76 (118)
                      |..||.|.|||..    +  ........|.++|.+|.|+|....    +.+|.|  .||  .+...+....   .....+
T Consensus       190 ~~~d~~i~iwd~~----~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v--~iwd~~~~~~~~~~~---~~~~~v  258 (343)
T 2xzm_R          190 VGWDGRLKVWNTN----F--QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL--LIWDILNLTYPQREF---DAGSTI  258 (343)
T ss_dssp             EETTSEEEEEETT----T--EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE--EEEESSCCSSCSEEE---ECSSCE
T ss_pred             EcCCCEEEEEcCC----C--ceeEEEcCccccceEEEECCCCCEEEEEcCCCeE--EEEECCCCcccceee---cCCCcE
Confidence            5679999999942    1  223667789999999999997766    789999  999  3444332201   012236


Q ss_pred             eeeecCc
Q psy14121         77 GRLGLGQ   83 (118)
Q Consensus        77 ~~l~~~~   83 (118)
                      .+|.|..
T Consensus       259 ~~v~~sp  265 (343)
T 2xzm_R          259 NQIAFNP  265 (343)
T ss_dssp             EEEEECS
T ss_pred             EEEEECC
Confidence            6666654

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=96.93  E-value=0.00044  Score=50.68  Aligned_cols=54  Identities=9%  Similarity=0.156  Sum_probs=41.0

Q ss_pred             CccccceEEEeehhhhcCCCCc-ccccccccccceeEEEeccC----C---CC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNK-VDILSKKHSGPVRALDFNKF----Q---VV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~-~l~~~~KHtGpVraLdFNp~----Q---~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.|||.+..-..... .+.....|.++|.+|.|+|.    .   ..    +.+|.|  .||
T Consensus        31 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i--~iw   96 (397)
T 1sq9_A           31 SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDL--LFY   96 (397)
T ss_dssp             EEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCE--EEE
T ss_pred             EEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCE--EEE
Confidence            4678999999998653221111 23777799999999999998    5   44    679999  999

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=96.92  E-value=0.00056  Score=50.58  Aligned_cols=71  Identities=18%  Similarity=0.265  Sum_probs=49.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCC---CCCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLH---HHFRVPGKKT   71 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~---~P~t~PG~ks   71 (118)
                      .|.+||.|.+||..    +  ..+.....|.++|.+|.|+|..++     +.++.|  .||  ....   .+..   ...
T Consensus       180 ~~~~d~~i~i~d~~----~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i--~iwd~~~~~~~~~~~~---~~~  248 (383)
T 3ei3_B          180 TGDSTGRLLLLGLD----G--HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATV--KLWDLRNIKDKNSYIA---EMP  248 (383)
T ss_dssp             EEETTSEEEEEETT----S--CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEE--EEEEGGGCCSTTCEEE---EEE
T ss_pred             EECCCCCEEEEECC----C--CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEE--EEEeCCCCCcccceEE---Eec
Confidence            36789999999972    2  234677789999999999999985     779999  999  4322   2221   111


Q ss_pred             CcccceeeecCc
Q psy14121         72 FNLILGRLGLGQ   83 (118)
Q Consensus        72 ~p~ei~~l~~~~   83 (118)
                      ....+.+|.|..
T Consensus       249 ~~~~v~~~~~s~  260 (383)
T 3ei3_B          249 HEKPVNAAYFNP  260 (383)
T ss_dssp             CSSCEEEEEECT
T ss_pred             CCCceEEEEEcC
Confidence            344566777654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=96.90  E-value=0.00033  Score=53.67  Aligned_cols=49  Identities=14%  Similarity=0.168  Sum_probs=40.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      -|.+|++|.|||...     ...+.....|.++|.++.|+|..++     +.+|.|  .||
T Consensus       161 s~s~D~tv~~Wd~~~-----~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v--~~w  214 (393)
T 4gq1_A          161 SVGDDCTLIIWRLTD-----EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNI--RIF  214 (393)
T ss_dssp             EEETTSEEEEEEEET-----TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEE--EEE
T ss_pred             EEECCCeEEEEECCC-----CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEE--EEE
Confidence            356899999999743     1234677889999999999998876     789999  999

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=96.89  E-value=0.00062  Score=48.52  Aligned_cols=49  Identities=20%  Similarity=0.396  Sum_probs=39.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...   +  ..+.....|+++|.+|+|+|....    +.+|.|  .||
T Consensus        49 ~~~~dg~i~vwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i--~iw  101 (369)
T 3zwl_B           49 SCSKDSSASVWYSLN---G--ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI--KLW  101 (369)
T ss_dssp             EEESSSCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEE--EEE
T ss_pred             EEeCCCEEEEEeCCC---c--hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE--EEE
Confidence            366899999999743   1  234677889999999999996555    789999  999

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=96.89  E-value=0.00069  Score=50.92  Aligned_cols=53  Identities=13%  Similarity=0.214  Sum_probs=39.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|..+|.|.|||.++--.- ...+.....|+++|.+|+|+|+..+     +.+|.|  .||
T Consensus        52 ~~~~~g~i~v~~~~~~~~~-~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v--~vw  109 (402)
T 2aq5_A           52 EASGGGAFLVLPLGKTGRV-DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTV--MVW  109 (402)
T ss_dssp             CCSSSCCEEEEETTCCEEC-CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEE--EEE
T ss_pred             EEcCCCEEEEEECccCCCC-CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeE--EEE
Confidence            4678999999998542110 0123566789999999999997666     679999  999

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=96.86  E-value=0.00054  Score=50.80  Aligned_cols=49  Identities=16%  Similarity=0.244  Sum_probs=39.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||.+.   +  ..+.....|+++|.+|.|+|....    +.+|.|  .||
T Consensus       156 s~s~d~~i~iwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v--~iw  208 (420)
T 3vl1_A          156 SSSQDMQLKIWSVKD---G--SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTI--RLW  208 (420)
T ss_dssp             EEETTSEEEEEETTT---C--CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEeCCC---C--cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcE--EEe
Confidence            367899999999853   1  223666789999999999997665    778999  999

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=96.86  E-value=0.0006  Score=52.03  Aligned_cols=50  Identities=12%  Similarity=0.238  Sum_probs=39.5

Q ss_pred             CccccceEEEeehhhhcCCCCccccc-ccccccceeEEEeccCCCC----CCcceehhhhhc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQVV----ATNFKIRAHLWR   58 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~-~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWn   58 (118)
                      -|.+||+|.|||.+..     ..+.. .+-|+++|.+|.|+|...-    ..|+-|  -||+
T Consensus       286 sgs~D~~V~iwd~~~~-----~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv--rvw~  340 (365)
T 4h5i_A          286 LASNDNSIALVKLKDL-----SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI--HIIK  340 (365)
T ss_dssp             EEETTSCEEEEETTTT-----EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE--EEEE
T ss_pred             EEcCCCEEEEEECCCC-----cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE--EEEE
Confidence            4778999999998532     12344 4669999999999997766    789999  9993

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=96.85  E-value=0.00065  Score=50.57  Aligned_cols=49  Identities=16%  Similarity=0.247  Sum_probs=39.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||+|.|||...   +  ..+.....|.++|.+|.|+|....    +.+|.|  .||
T Consensus       201 sg~~d~~v~~wd~~~---~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v--~iw  253 (340)
T 1got_B          201 SGACDASAKLWDVRE---G--MCRQTFTGHESDINAICFFPNGNAFATGSDDATC--RLF  253 (340)
T ss_dssp             EEETTSCEEEEETTT---C--SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred             EEeCCCcEEEEECCC---C--eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcE--EEE
Confidence            367899999999843   1  223667789999999999997665    789999  999

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=96.83  E-value=0.0006  Score=50.98  Aligned_cols=51  Identities=14%  Similarity=0.237  Sum_probs=40.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhcc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRN   59 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn   59 (118)
                      .|.+||+|.|||...     ...+.....|+++|.+|.|+|....    +.||.|  .||+-
T Consensus       265 s~s~D~~v~iwd~~~-----~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i--~vwd~  319 (321)
T 3ow8_A          265 SSSSDKSVKVWDVGT-----RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI--HIYDC  319 (321)
T ss_dssp             EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCE--EEEEC
T ss_pred             EEeCCCcEEEEeCCC-----CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeE--EEEeC
Confidence            367899999999843     1234677889999999999997665    889999  99953

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=96.83  E-value=0.00055  Score=50.01  Aligned_cols=51  Identities=22%  Similarity=0.360  Sum_probs=38.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccC-CCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKF-QVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~-Q~N-----gs~GEI~~fIW   57 (118)
                      -|..||+|.|||.+.   +....+.....|+++|.+|+|+|- ..+     +.|+.|  .||
T Consensus        26 s~s~D~~v~iw~~~~---~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v--~iW   82 (297)
T 2pm7_B           26 TCSSDKTIKIFEVEG---ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV--MIW   82 (297)
T ss_dssp             EEETTSCEEEEEBCS---SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE--EEE
T ss_pred             EEeCCCEEEEEecCC---CCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE--EEE
Confidence            367899999999742   111233677889999999999864 233     789999  999

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=96.83  E-value=0.00061  Score=49.93  Aligned_cols=74  Identities=11%  Similarity=0.074  Sum_probs=48.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCC--CC-CCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLH--HH-FRVPGKKTF   72 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~--~P-~t~PG~ks~   72 (118)
                      -|..||.|.|||.+.   +....+.....|+++|.+|+|+|...-    +.+|.|  .||  ....  .+ ..+.+   .
T Consensus        28 ~~~~d~~i~iw~~~~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v--~vwd~~~~~~~~~~~~~~~---~   99 (377)
T 3dwl_C           28 TTTATNQVELYEQDG---NGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNA--YVYEKRPDGTWKQTLVLLR---L   99 (377)
T ss_dssp             CCCSSSCBCEEEEET---TEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSE--EEC------CCCCEEECCC---C
T ss_pred             EecCCCEEEEEEccC---CceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeE--EEEEcCCCCceeeeeEecc---c
Confidence            466899999999862   100233677789999999999998665    678999  999  2222  12 22111   3


Q ss_pred             cccceeeecCc
Q psy14121         73 NLILGRLGLGQ   83 (118)
Q Consensus        73 p~ei~~l~~~~   83 (118)
                      ...+.+|.|..
T Consensus       100 ~~~v~~~~~~~  110 (377)
T 3dwl_C          100 NRAATFVRWSP  110 (377)
T ss_dssp             SSCEEEEECCT
T ss_pred             CCceEEEEECC
Confidence            44577777753

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=96.80  E-value=0.00042  Score=48.29  Aligned_cols=30  Identities=23%  Similarity=0.470  Sum_probs=26.2

Q ss_pred             ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121         26 ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus        26 ~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .....|.++|.+|+|+|...-    +.||.|  .||
T Consensus       300 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v--~iw  333 (351)
T 3f3f_A          300 SEHDDHNGEVWSVSWNLTGTILSSAGDDGKV--RLW  333 (351)
T ss_dssp             EEECTTSSCEEEEEECSSSCCEEEEETTSCE--EEE
T ss_pred             EEEecccccEEEEEEcCCCCEEEEecCCCcE--EEE
Confidence            556779999999999997765    789999  999

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=96.79  E-value=0.0006  Score=52.93  Aligned_cols=48  Identities=21%  Similarity=0.401  Sum_probs=38.9

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWR   58 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWn   58 (118)
                      |.+||+|.|||+    .+  ..+...+-|+++|.+|.|+|...-    +.++.|  .||+
T Consensus        34 ~~~d~~v~iWd~----~~--~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i--~vWd   85 (577)
T 2ymu_A           34 ASDDKTVKLWNR----NG--QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV--KLWN   85 (577)
T ss_dssp             EETTSEEEEECT----TS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE--EEEE
T ss_pred             EeCCCEEEEEEC----CC--CEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEE--EEEE
Confidence            568999999995    23  234677889999999999997665    788999  9993

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=96.77  E-value=0.0011  Score=46.36  Aligned_cols=71  Identities=8%  Similarity=0.102  Sum_probs=48.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCC--CCC-CCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLH--HHF-RVPGKKTF   72 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~--~P~-t~PG~ks~   72 (118)
                      .|.+||.|.|||.+.     .........|.++|.+|.|+|....    +.+|.|  .+|  .+..  .+. .+   ...
T Consensus        34 s~~~dg~v~vw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i--~~~~~~~~~~~~~~~~~---~~~  103 (313)
T 3odt_A           34 SVSRDGTVRLWSKDD-----QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI--NGVPLFATSGEDPLYTL---IGH  103 (313)
T ss_dssp             EEETTSEEEEEEESS-----SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE--EEEETTCCTTSCC-CEE---CCC
T ss_pred             EEEcCCcEEEEECCC-----CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE--EEEEeeecCCCCcccch---hhc
Confidence            467899999999732     1223777889999999999996665    789999  988  3332  222 21   223


Q ss_pred             cccceeeecC
Q psy14121         73 NLILGRLGLG   82 (118)
Q Consensus        73 p~ei~~l~~~   82 (118)
                      ...+.+|.|.
T Consensus       104 ~~~i~~~~~~  113 (313)
T 3odt_A          104 QGNVCSLSFQ  113 (313)
T ss_dssp             SSCEEEEEEE
T ss_pred             ccCEEEEEec
Confidence            4556777774

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=96.76  E-value=0.00072  Score=49.55  Aligned_cols=49  Identities=20%  Similarity=0.425  Sum_probs=40.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||+|.|||.+.   +  ..+.....|++.|.+|.|+|..+.    +.||.|  .||
T Consensus        72 s~s~d~~i~vwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v--~lW  124 (304)
T 2ynn_A           72 VGSDDFRIRVFNYNT---G--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV--KLW  124 (304)
T ss_dssp             EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE--EEE
T ss_pred             EECCCCEEEEEECCC---C--cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeE--EEE
Confidence            367899999999743   1  234677889999999999998776    789999  999

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=96.76  E-value=0.00097  Score=48.07  Aligned_cols=49  Identities=22%  Similarity=0.376  Sum_probs=39.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...     ...+...+.|.+.|.++.|+|....    +.+|.|  .||
T Consensus        82 s~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i--~iw  134 (312)
T 4ery_A           82 SASDDKTLKIWDVSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV--RIW  134 (312)
T ss_dssp             EEETTSEEEEEETTT-----CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE--EEE
T ss_pred             EECCCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcE--EEE
Confidence            367899999999743     1234677889999999999997665    789999  999

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=96.72  E-value=0.00071  Score=47.16  Aligned_cols=52  Identities=17%  Similarity=0.323  Sum_probs=38.9

Q ss_pred             CccccceEEEeehhhhcCCCC-cccccccccccceeEEEeccCC-CC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDN-KVDILSKKHSGPVRALDFNKFQ-VV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~-~~l~~~~KHtGpVraLdFNp~Q-~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.+.--  .. ..+.....|+++|.+|.|+|.+ .+     +.+|.|  .||
T Consensus        28 ~~~~dg~i~iw~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v--~vw   86 (351)
T 3f3f_A           28 TCSSDQHIKVFKLDKDT--SNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV--KLW   86 (351)
T ss_dssp             EEETTSEEEEEEECSSS--CCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE--EEE
T ss_pred             EeeCCCeEEEEECCCCC--CcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE--EEE
Confidence            46789999999985310  11 1226667899999999999963 33     779999  999

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=96.70  E-value=0.0014  Score=50.45  Aligned_cols=73  Identities=19%  Similarity=0.302  Sum_probs=50.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI   75 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e   75 (118)
                      .|..||+|.|||...   +  ..+.....|.+.|++|.|+|....    +.||.|  .||  .+.....++.|   ....
T Consensus       313 sgs~D~~i~iwd~~~---~--~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i--~vwd~~~~~~~~~~~~---h~~~  382 (410)
T 1vyh_C          313 SGSRDKTIKMWDVST---G--MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL--RVWDYKNKRCMKTLNA---HEHF  382 (410)
T ss_dssp             EEETTSEEEEEETTT---T--EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEE--EEECCTTSCCCEEEEC---CSSC
T ss_pred             EEeCCCeEEEEECCC---C--ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeE--EEEECCCCceEEEEcC---CCCc
Confidence            367899999999743   1  123666789999999999997776    789999  999  32222223212   2345


Q ss_pred             ceeeecCcc
Q psy14121         76 LGRLGLGQS   84 (118)
Q Consensus        76 i~~l~~~~~   84 (118)
                      |.+|.|...
T Consensus       383 v~~l~~~~~  391 (410)
T 1vyh_C          383 VTSLDFHKT  391 (410)
T ss_dssp             EEEEEECSS
T ss_pred             EEEEEEcCC
Confidence            778887643

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=96.69  E-value=0.00088  Score=51.98  Aligned_cols=48  Identities=21%  Similarity=0.412  Sum_probs=39.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.    .+  +.+....-|+++|.+|.|.|....    +.|+.|  +||
T Consensus       525 s~~~dg~v~lwd~----~~--~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i--~~W  576 (577)
T 2ymu_A          525 SASDDKTVKLWNR----NG--QLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTV--KLW  576 (577)
T ss_dssp             EEETTSEEEEECT----TS--CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE--EEE
T ss_pred             EEECcCEEEEEeC----CC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEE--EEe
Confidence            3678999999994    23  234677889999999999997766    789999  999

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=96.69  E-value=0.00063  Score=48.45  Aligned_cols=52  Identities=19%  Similarity=0.195  Sum_probs=28.4

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.|.|+..+|-...+  .+.-.+ ..++-|+|+|.+|+|+|..++     +.|+.|  .||
T Consensus         9 ~g~d~g~~~~~~~~~~--~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i--~vW   66 (340)
T 4aow_A            9 SGVDLGTENLYFQSMM--TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTI--IMW   66 (340)
T ss_dssp             -------------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCE--EEE
T ss_pred             cccCCCCccEEEEEcc--CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeE--EEE
Confidence            5788898888755332  111133 667889999999999998877     678999  999

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=96.67  E-value=0.00089  Score=49.05  Aligned_cols=49  Identities=14%  Similarity=0.253  Sum_probs=40.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||+|.|||...     ...+...+-|.++|.++.|+|..+-    +.||.|  .||
T Consensus       203 s~s~D~~i~iWd~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i--~iW  255 (304)
T 2ynn_A          203 TASDDLTIKIWDYQT-----KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTL--KIW  255 (304)
T ss_dssp             EEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE--EEE
T ss_pred             EEcCCCeEEEEeCCC-----CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeE--EEE
Confidence            467899999999743     1234777889999999999998776    789999  999

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=96.66  E-value=0.00092  Score=49.39  Aligned_cols=50  Identities=14%  Similarity=0.149  Sum_probs=38.2

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC------CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV------ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N------gs~GEI~~fIW   57 (118)
                      |..||+|.|||...   +.-..+.....|+++|.+|.|+|....      +.|+.|  .||
T Consensus        77 ~s~D~~v~iWd~~~---~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i--~lw  132 (316)
T 3bg1_A           77 CSYDRKVIIWREEN---GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAI--SLL  132 (316)
T ss_dssp             EETTSCEEEECCSS---SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCE--EEE
T ss_pred             EECCCEEEEEECCC---CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCE--EEE
Confidence            56799999999752   211223556789999999999998532      789999  999

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=96.65  E-value=0.00092  Score=50.56  Aligned_cols=71  Identities=15%  Similarity=0.310  Sum_probs=48.8

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----C---Ccceehhhhh-ccCCCCCCCCCCCCCcc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----A---TNFKIRAHLW-RNLHHHFRVPGKKTFNL   74 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----g---s~GEI~~fIW-nn~~~P~t~PG~ks~p~   74 (118)
                      |..||.|.+||...     ...+.....|.++|.+|.|+|.+.+    +   .++.|  .|| -...++..   .-....
T Consensus       235 ~~~d~~v~iwd~~~-----~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i--~i~d~~~~~~~~---~~~~~~  304 (401)
T 4aez_A          235 GGNDNVVQIWDARS-----SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI--HFWNAATGARVN---TVDAGS  304 (401)
T ss_dssp             EETTSCEEEEETTC-----SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEE--EEEETTTCCEEE---EEECSS
T ss_pred             EeCCCeEEEccCCC-----CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEE--EEEECCCCCEEE---EEeCCC
Confidence            66899999999854     1233666789999999999999888    3   49999  999 23333322   011233


Q ss_pred             cceeeecCc
Q psy14121         75 ILGRLGLGQ   83 (118)
Q Consensus        75 ei~~l~~~~   83 (118)
                      .+.+|.|..
T Consensus       305 ~v~~~~~s~  313 (401)
T 4aez_A          305 QVTSLIWSP  313 (401)
T ss_dssp             CEEEEEECS
T ss_pred             cEEEEEECC
Confidence            467777754

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=96.64  E-value=0.00091  Score=49.50  Aligned_cols=49  Identities=14%  Similarity=0.339  Sum_probs=39.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||....     ........|+++|.+|.|+|...-    +.||.|  .||
T Consensus       171 s~~~d~~i~~wd~~~~-----~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i--~iw  223 (319)
T 3frx_A          171 SAGNDKMVKAWNLNQF-----QIEADFIGHNSNINTLTASPDGTLIASAGKDGEI--MLW  223 (319)
T ss_dssp             EEETTSCEEEEETTTT-----EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEE--EEE
T ss_pred             EEeCCCEEEEEECCcc-----hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeE--EEE
Confidence            3568999999998532     122667789999999999997766    789999  999

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=96.63  E-value=0.0011  Score=50.10  Aligned_cols=49  Identities=18%  Similarity=0.310  Sum_probs=39.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||..+   +  ..+.....|+++|.+|.|+|....    +.||.|  .||
T Consensus       301 ~g~~d~~i~vwd~~~---~--~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v--~vW  353 (354)
T 2pbi_B          301 AGYNDYTINVWDVLK---G--SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTL--RVW  353 (354)
T ss_dssp             EEETTSCEEEEETTT---C--SEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE--EEE
T ss_pred             EEECCCcEEEEECCC---C--ceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCE--Eec
Confidence            467899999999742   2  234667789999999999998777    779999  998

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=96.63  E-value=0.00076  Score=48.41  Aligned_cols=74  Identities=11%  Similarity=0.186  Sum_probs=48.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCC--CC----CCcceehhhhh--ccC--CCCCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ--VV----ATNFKIRAHLW--RNL--HHHFRVPGKKT   71 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q--~N----gs~GEI~~fIW--nn~--~~P~t~PG~ks   71 (118)
                      .|.+||.|.|||...   +....+.....|.++|.+|.|+|..  ..    +.+|.|  .||  ...  ..++.+   ..
T Consensus        74 s~~~dg~v~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i--~v~d~~~~~~~~~~~~---~~  145 (379)
T 3jrp_A           74 SCSYDGKVLIWKEEN---GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV--SVVEFKENGTTSPIII---DA  145 (379)
T ss_dssp             EEETTSCEEEEEEET---TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE--EEEECCTTSCCCEEEE---EC
T ss_pred             EeccCCEEEEEEcCC---CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE--EEEecCCCCceeeEEe---cC
Confidence            467899999999754   1111336677799999999999984  33    789999  999  322  122221   12


Q ss_pred             CcccceeeecCc
Q psy14121         72 FNLILGRLGLGQ   83 (118)
Q Consensus        72 ~p~ei~~l~~~~   83 (118)
                      ....+.++.|..
T Consensus       146 ~~~~v~~~~~~~  157 (379)
T 3jrp_A          146 HAIGVNSASWAP  157 (379)
T ss_dssp             CTTCEEEEEECC
T ss_pred             CCCceEEEEEcC
Confidence            344566666654

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.58  E-value=0.00083  Score=49.95  Aligned_cols=54  Identities=9%  Similarity=0.287  Sum_probs=34.5

Q ss_pred             CccccceEEEeehhhhcCCC-C-cccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGD-N-KVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~-~-~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||.+.-.... . ..+...+.|+++|.+|.|+|....    +.|+.|  .||
T Consensus        75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v--~iw  134 (330)
T 2hes_X           75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSV--WIW  134 (330)
T ss_dssp             EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCE--EEE
T ss_pred             EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEE--EEE
Confidence            36689999999985422111 1 123667789999999999997655    679999  999

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=96.55  E-value=0.0012  Score=47.33  Aligned_cols=54  Identities=17%  Similarity=0.172  Sum_probs=40.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.|||...--......+.....|.++|.+|.|.|...-    +.+|.|  .||
T Consensus       226 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i--~iw  283 (379)
T 3jrp_A          226 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV--TLW  283 (379)
T ss_dssp             EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSE--EEE
T ss_pred             EEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcE--EEE
Confidence            356899999999864211001123566779999999999998776    789999  999

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=96.52  E-value=0.0012  Score=53.57  Aligned_cols=72  Identities=13%  Similarity=0.139  Sum_probs=49.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI   75 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e   75 (118)
                      -|..||.|.|||...   +  ..+.....|.++|+++.|+|....    +.+|.|  .||  ++-....++.|   ....
T Consensus        30 ~~~~~g~v~iwd~~~---~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i--~vw~~~~~~~~~~~~~---~~~~   99 (814)
T 3mkq_A           30 TTLYSGRVEIWNYET---Q--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI--RVFNYNTGEKVVDFEA---HPDY   99 (814)
T ss_dssp             EEETTSEEEEEETTT---T--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE--EEEETTTCCEEEEEEC---CSSC
T ss_pred             EEeCCCEEEEEECCC---C--ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeE--EEEECCCCcEEEEEec---CCCC
Confidence            356899999999743   1  223677789999999999997766    779999  999  32222223111   2344


Q ss_pred             ceeeecCc
Q psy14121         76 LGRLGLGQ   83 (118)
Q Consensus        76 i~~l~~~~   83 (118)
                      |.++.|..
T Consensus       100 v~~~~~s~  107 (814)
T 3mkq_A          100 IRSIAVHP  107 (814)
T ss_dssp             EEEEEECS
T ss_pred             EEEEEEeC
Confidence            66777754

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=96.47  E-value=0.0013  Score=49.86  Aligned_cols=71  Identities=24%  Similarity=0.369  Sum_probs=48.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh--ccCCCCCCCCCCCCCcccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW--RNLHHHFRVPGKKTFNLIL   76 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei   76 (118)
                      .|.+||+|.+||...-     ..+.....|+++|.+|.|.|..--   +.+|.|  .||  .+.....++.|   ....+
T Consensus       137 sgs~dg~i~vwd~~~~-----~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i--~vwd~~~~~~~~~~~~---h~~~v  206 (464)
T 3v7d_B          137 TGADDKMIRVYDSINK-----KFLLQLSGHDGGVWALKYAHGGILVSGSTDRTV--RVWDIKKGCCTHVFEG---HNSTV  206 (464)
T ss_dssp             EEETTSCEEEEETTTT-----EEEEEECCCSSCEEEEEECSTTEEEEEETTSCE--EEEETTTTEEEEEECC---CSSCE
T ss_pred             EEcCCCcEEEEECCCC-----cEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCE--EEEECCCCcEEEEECC---CCCcc
Confidence            4678999999997431     233667789999999999875522   889999  999  33222223222   34556


Q ss_pred             eeeecC
Q psy14121         77 GRLGLG   82 (118)
Q Consensus        77 ~~l~~~   82 (118)
                      .||.|.
T Consensus       207 ~~l~~~  212 (464)
T 3v7d_B          207 RCLDIV  212 (464)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            677765

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=96.47  E-value=0.0014  Score=50.47  Aligned_cols=49  Identities=20%  Similarity=0.548  Sum_probs=39.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||+|.|||.+.   +  ......+.|+++|.+|.|+|...-    +.||.|  .||
T Consensus       125 s~s~Dg~i~vwd~~~---~--~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i--~iw  177 (410)
T 1vyh_C          125 SASEDATIKVWDYET---G--DFERTLKGHTDSVQDISFDHSGKLLASCSADMTI--KLW  177 (410)
T ss_dssp             EEESSSCEEEEETTT---C--CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCC--CEE
T ss_pred             EEeCCCeEEEEECCC---C--cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeE--EEE
Confidence            467899999999743   1  123667789999999999987655    789999  999

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=96.47  E-value=0.0011  Score=55.89  Aligned_cols=75  Identities=16%  Similarity=0.229  Sum_probs=50.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCC-CC-----CCcceehhhhh--ccCC--CCCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ-VV-----ATNFKIRAHLW--RNLH--HHFRVPGKKT   71 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q-~N-----gs~GEI~~fIW--nn~~--~P~t~PG~ks   71 (118)
                      .|.+||+|.|||...   +....+.....|+++|.+|.|+|.. .+     +.+|.|  .||  .+..  ....+   ..
T Consensus        26 tg~~dg~I~vwd~~~---~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I--~vwd~~~~~~~~~~~~---~~   97 (753)
T 3jro_A           26 TCSSDKTIKIFEVEG---ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV--LIWKEENGRWSQIAVH---AV   97 (753)
T ss_dssp             EEETTTEEEEEEEET---TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE--EEEEEETTEEEEEEEE---CC
T ss_pred             EEECCCcEEEEecCC---CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE--EEEECCCCcccccccc---cC
Confidence            467899999999752   1112236778899999999999874 33     789999  999  3221  11221   12


Q ss_pred             CcccceeeecCcc
Q psy14121         72 FNLILGRLGLGQS   84 (118)
Q Consensus        72 ~p~ei~~l~~~~~   84 (118)
                      ....|.||.|...
T Consensus        98 h~~~V~~v~~sp~  110 (753)
T 3jro_A           98 HSASVNSVQWAPH  110 (753)
T ss_dssp             CSSCEEEEEECCG
T ss_pred             CCCCeEEEEECCC
Confidence            3456778888654

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=96.47  E-value=0.0015  Score=47.73  Aligned_cols=54  Identities=17%  Similarity=0.172  Sum_probs=38.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||+|.|||.+.--......+.....|.++|.+++|+|...-    +.||.|  .||
T Consensus       224 s~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v--~lw  281 (297)
T 2pm7_B          224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV--TLW  281 (297)
T ss_dssp             EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCE--EEE
T ss_pred             EEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcE--EEE
Confidence            367899999999854110000112333679999999999998776    789999  999

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=96.47  E-value=0.002  Score=46.43  Aligned_cols=49  Identities=18%  Similarity=0.412  Sum_probs=39.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---C---Ccceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---A---TNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---g---s~GEI~~fIW   57 (118)
                      .|.+||.|.|||...     ...+.....|+++|.++.|+|..+-   +   .|+.|  .||
T Consensus       254 sg~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i--~~W  308 (312)
T 4ery_A          254 SGSEDNLVYIWNLQT-----KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI--KLW  308 (312)
T ss_dssp             ECCTTSCEEEEETTT-----CCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCE--EEE
T ss_pred             EECCCCEEEEEECCC-----chhhhhhhccCCcEEEEeecCcCCceEEEEccCCccE--EEe
Confidence            477899999999742     1234778889999999999998776   3   58999  999

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=96.46  E-value=0.0015  Score=47.96  Aligned_cols=49  Identities=10%  Similarity=0.003  Sum_probs=39.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...   +  ..+.....|.++|.++.|+|..+.     +.+|.|  .||
T Consensus       280 s~~~dg~v~~wd~~~---~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i--~iw  333 (416)
T 2pm9_A          280 SSGRDNTVLLWNPES---A--EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKI--EVQ  333 (416)
T ss_dssp             EEESSSEEEEECSSS---C--CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEE--EEE
T ss_pred             EEeCCCCEEEeeCCC---C--ccceeecCCCCceEEEEECCCCCCEEEEEecCCcE--EEE
Confidence            356899999999743   1  234777889999999999998865     779999  999

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=96.46  E-value=0.0019  Score=45.52  Aligned_cols=48  Identities=6%  Similarity=0.206  Sum_probs=35.3

Q ss_pred             cceEEEeehhhhcCCCCccc--ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          6 DGIIQMYNVDNIMSGDNKVD--ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         6 nG~I~lwdp~kIL~g~~~~l--~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      ||.|.|||.+.--  ....+  .....|.++|.++.|+|...-    +.+|.|  .||
T Consensus        71 dg~i~iw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~~~  124 (337)
T 1gxr_A           71 KGCVKVWDISHPG--NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL--SIW  124 (337)
T ss_dssp             BSEEEEEETTSTT--CCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE--EEE
T ss_pred             CCeEEEEECCCCC--ceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcE--EEE
Confidence            8999999986421  11112  333379999999999996554    678999  999

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=96.44  E-value=0.0017  Score=49.97  Aligned_cols=54  Identities=15%  Similarity=0.172  Sum_probs=43.2

Q ss_pred             CccccceEEEeehhhhcCCC-----CcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGD-----NKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~-----~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.++|.|.|||..+.....     ...+.....|+++|.+|+|+|...+     +.+|.|  .||
T Consensus       146 t~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i--~vw  209 (430)
T 2xyi_A          146 TKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTI--CLW  209 (430)
T ss_dssp             EECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCE--EEE
T ss_pred             EECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeE--EEE
Confidence            46789999999998743321     1233777889999999999999885     779999  999

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=96.42  E-value=0.0016  Score=46.47  Aligned_cols=54  Identities=7%  Similarity=0.107  Sum_probs=40.6

Q ss_pred             CccccceEEEeehhhhcCC-------C------C-cccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSG-------D------N-KVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g-------~------~-~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...--..       .      + ..+.....|+++|.+|.|+|....     +.+|.|  .||
T Consensus       277 ~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i--~iw  349 (357)
T 3i2n_A          277 TAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTV--RVL  349 (357)
T ss_dssp             EEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEE--EEE
T ss_pred             EEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcE--EEE
Confidence            4678999999998642111       0      0 123677889999999999998776     568999  999

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=96.41  E-value=0.0017  Score=45.48  Aligned_cols=48  Identities=17%  Similarity=0.275  Sum_probs=38.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhhc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLWR   58 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIWn   58 (118)
                      .|.+||.|.+||..       ..+.....|.++|.++.|.|...+     +.+|.|  .||+
T Consensus       119 ~~~~d~~i~~~d~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i--~i~d  171 (313)
T 3odt_A          119 SGSWDKTAKVWKEG-------SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTI--KLWQ  171 (313)
T ss_dssp             EEETTSEEEEEETT-------EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE--EEEE
T ss_pred             EEeCCCCEEEEcCC-------cEEEecccCCCceeEEEEccCCCCEEEEEECCCCE--EEEe
Confidence            36789999999921       233677789999999999997776     789999  9994

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=96.39  E-value=0.0023  Score=52.36  Aligned_cols=75  Identities=13%  Similarity=0.202  Sum_probs=49.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhcc-CCCCCCC-CCCCCCccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRN-LHHHFRV-PGKKTFNLI   75 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn-~~~P~t~-PG~ks~p~e   75 (118)
                      .|..||+|.|||...-     ..+.+...|+++|.+|.|+|....    +.|+.|  .||+. ....+++ .+.......
T Consensus       447 sgs~Dg~v~vwd~~~~-----~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i--~iwd~~~~~~~~~~~~~~~h~~~  519 (694)
T 3dm0_A          447 SGSWDGELRLWDLAAG-----VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI--KLWNTLGECKYTISEGGEGHRDW  519 (694)
T ss_dssp             EEETTSEEEEEETTTT-----EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE--EEECTTSCEEEEECSSTTSCSSC
T ss_pred             EEeCCCcEEEEECCCC-----cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEE--EEEECCCCcceeeccCCCCCCCc
Confidence            3678999999997431     123667789999999999998776    789999  99932 1212110 122233445


Q ss_pred             ceeeecCc
Q psy14121         76 LGRLGLGQ   83 (118)
Q Consensus        76 i~~l~~~~   83 (118)
                      +.||.|..
T Consensus       520 v~~~~~~~  527 (694)
T 3dm0_A          520 VSCVRFSP  527 (694)
T ss_dssp             EEEEEECS
T ss_pred             EEEEEEeC
Confidence            67777643

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=96.39  E-value=0.0014  Score=46.81  Aligned_cols=51  Identities=16%  Similarity=0.313  Sum_probs=37.8

Q ss_pred             CccccceEEEeehhhhcCCCCc--cccccccc--ccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNK--VDILSKKH--SGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~--~l~~~~KH--tGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...   ++..  .+.....|  .++|.+|.|+|....    +.+|.|  +||
T Consensus       304 ~~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i--~iw  362 (366)
T 3k26_A          304 LGNQVGKLYVWDLEV---EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASI--WRW  362 (366)
T ss_dssp             EECTTSCEEEEECCS---SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EEecCCcEEEEECCC---CCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEE--EEE
Confidence            367899999999753   1111  12355555  899999999996655    789999  999

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=96.38  E-value=0.0021  Score=47.50  Aligned_cols=53  Identities=19%  Similarity=0.300  Sum_probs=39.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||+|.|||.+....+.. .......|+++|.+|.|+|...-    +.||.|  .||
T Consensus       233 s~s~D~~v~iw~~~~~~~~~~-~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v--~lw  289 (316)
T 3bg1_A          233 SCSQDGRVFIWTCDDASSNTW-SPKLLHKFNDVVWHVSWSITANILAVSGGDNKV--TLW  289 (316)
T ss_dssp             EEETTCEEEEEECSSTTCCCC-BCCEEEECSSCEEEEEECTTTCCEEEEESSSCE--EEE
T ss_pred             EEcCCCeEEEEEccCccccch-hhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeE--EEE
Confidence            367899999999865322211 11334679999999999998776    789999  999

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=96.38  E-value=0.0018  Score=48.31  Aligned_cols=72  Identities=14%  Similarity=0.176  Sum_probs=49.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI   75 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e   75 (118)
                      .|.+||.|.|||...-     ..+.....|+++|.+|.|+|....    +.|+.|  .||  .......++.|   ....
T Consensus       223 s~s~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v--~iwd~~~~~~~~~~~~---h~~~  292 (321)
T 3ow8_A          223 TASDDGYIKIYDVQHA-----NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV--KVWDVGTRTCVHTFFD---HQDQ  292 (321)
T ss_dssp             EECTTSCEEEEETTTC-----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEEETTTTEEEEEECC---CSSC
T ss_pred             EEcCCCeEEEEECCCc-----ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcE--EEEeCCCCEEEEEEcC---CCCc
Confidence            4678999999998531     223677889999999999998766    789999  999  32222222222   2345


Q ss_pred             ceeeecCc
Q psy14121         76 LGRLGLGQ   83 (118)
Q Consensus        76 i~~l~~~~   83 (118)
                      +.+|.|..
T Consensus       293 v~~v~~s~  300 (321)
T 3ow8_A          293 VWGVKYNG  300 (321)
T ss_dssp             EEEEEECT
T ss_pred             EEEEEECC
Confidence            77777754

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=96.36  E-value=0.0018  Score=49.25  Aligned_cols=49  Identities=18%  Similarity=0.491  Sum_probs=39.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.+.-     ..+...+.|+++|.+|+|+|....    +.++.|  .||
T Consensus       140 s~~~d~~i~iwd~~~~-----~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v--~iw  192 (393)
T 1erj_A          140 TGAEDRLIRIWDIENR-----KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTV--RIW  192 (393)
T ss_dssp             EEETTSCEEEEETTTT-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EEcCCCeEEEEECCCC-----cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcE--EEE
Confidence            3678999999997531     223667889999999999997766    789999  999

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=96.33  E-value=0.0019  Score=47.73  Aligned_cols=49  Identities=18%  Similarity=0.343  Sum_probs=39.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||.+.   +  ..+.....|+++|.+|+|+|....    +.|+.|  .||
T Consensus        82 s~s~D~~v~~wd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i--~vw  134 (319)
T 3frx_A           82 SASWDKTLRLWDVAT---G--ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI--KVW  134 (319)
T ss_dssp             EEETTSEEEEEETTT---T--EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCE--EEE
T ss_pred             EEeCCCEEEEEECCC---C--CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeE--EEE
Confidence            356899999999843   1  233677889999999999997766    789999  999

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=96.32  E-value=0.0023  Score=48.26  Aligned_cols=49  Identities=12%  Similarity=0.203  Sum_probs=39.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.+||...   +  ..+.....|+++|.+|.|+|....    +.|+.|  .||
T Consensus       215 sgs~Dg~v~~wd~~~---~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v--~lw  267 (354)
T 2pbi_B          215 SGGCDKKAMVWDMRS---G--QCVQAFETHESDVNSVRYYPSGDAFASGSDDATC--RLY  267 (354)
T ss_dssp             EEETTSCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEECCC---C--cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeE--EEE
Confidence            366899999999753   1  223667789999999999997665    789999  999

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=96.31  E-value=0.002  Score=48.77  Aligned_cols=50  Identities=12%  Similarity=0.218  Sum_probs=39.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||...    ....+.....|.++|.+|.|+|....    +.||.|  .||
T Consensus       223 sgs~D~~v~~wd~~~----~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i--~lw  276 (380)
T 3iz6_a          223 SGSCDTTVRLWDLRI----TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTC--RLF  276 (380)
T ss_dssp             EEETTSCEEEEETTT----TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCE--EEE
T ss_pred             EEECCCeEEEEECCC----CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeE--EEE
Confidence            367899999999742    11234566789999999999997665    789999  999

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=96.25  E-value=0.0037  Score=45.30  Aligned_cols=49  Identities=14%  Similarity=0.335  Sum_probs=40.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|..+|.|.+||...   +  ..+.....|.++|.+|.|+|....     +.+|.|  .||
T Consensus       161 ~~~~~~~v~~~d~~~---~--~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i--~i~  214 (408)
T 4a11_B          161 VGTRGPKVQLCDLKS---G--SCSHILQGHRQEILAVSWSPRYDYILATASADSRV--KLW  214 (408)
T ss_dssp             EEESSSSEEEEESSS---S--CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCE--EEE
T ss_pred             EEcCCCeEEEEeCCC---c--ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcE--EEE
Confidence            467899999999843   1  233667789999999999999886     788999  999

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=96.25  E-value=0.0028  Score=47.86  Aligned_cols=72  Identities=17%  Similarity=0.193  Sum_probs=45.5

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCC-CCCCCCCCCcccc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHH-FRVPGKKTFNLIL   76 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P-~t~PG~ks~p~ei   76 (118)
                      |..||.|.+||...    ....+.....|.++|.+|+|+|....    +.+|.|  .|| -....+ +.+.   .....+
T Consensus       192 ~~~dg~i~i~d~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v--~iwd~~~~~~~~~~~---~~~~~v  262 (401)
T 4aez_A          192 GSRSGAIHHHDVRI----ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVV--QIWDARSSIPKFTKT---NHNAAV  262 (401)
T ss_dssp             EETTSEEEEEETTS----SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE--EEEETTCSSEEEEEC---CCSSCC
T ss_pred             EcCCCCEEEEeccc----CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeE--EEccCCCCCccEEec---CCcceE
Confidence            45677777777632    11223667789999999999995554    678999  999 222333 2211   123446


Q ss_pred             eeeecCc
Q psy14121         77 GRLGLGQ   83 (118)
Q Consensus        77 ~~l~~~~   83 (118)
                      .+|.|..
T Consensus       263 ~~~~~~p  269 (401)
T 4aez_A          263 KAVAWCP  269 (401)
T ss_dssp             CEEEECT
T ss_pred             EEEEECC
Confidence            6676654

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=96.25  E-value=0.003  Score=45.15  Aligned_cols=71  Identities=10%  Similarity=-0.074  Sum_probs=47.2

Q ss_pred             CccccceEEEeeh-hhhcCCCCcccccccc--cccceeEEEeccCCCC----CCcceehhhhh--ccC--------CCCC
Q psy14121          2 GGCDDGIIQMYNV-DNIMSGDNKVDILSKK--HSGPVRALDFNKFQVV----ATNFKIRAHLW--RNL--------HHHF   64 (118)
Q Consensus         2 GGlenG~I~lwdp-~kIL~g~~~~l~~~~K--HtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~--------~~P~   64 (118)
                      .|..||.|.+||. +.-      .......  |.++|.+|.|+| ...    +.++.|  .||  ...        .++.
T Consensus        74 ~~~~dg~i~~wd~~~~~------~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i--~iwd~~~~~~~~~~~~~~~~  144 (342)
T 1yfq_A           74 VGTVQGEILKVDLIGSP------SFQALTNNEANLGICRICKYG-DDKLIAASWDGLI--EVIDPRNYGDGVIAVKNLNS  144 (342)
T ss_dssp             EEETTSCEEEECSSSSS------SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEE--EEECHHHHTTBCEEEEESCS
T ss_pred             EEcCCCeEEEEEeccCC------ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeE--EEEcccccccccccccCCee
Confidence            3568999999997 431      2244555  999999999999 333    889999  999  321        3333


Q ss_pred             CCCCCCCCcccceeeecCcc
Q psy14121         65 RVPGKKTFNLILGRLGLGQS   84 (118)
Q Consensus        65 t~PG~ks~p~ei~~l~~~~~   84 (118)
                      .   .-..+..+.++.|...
T Consensus       145 ~---~~~~~~~v~~~~~~~~  161 (342)
T 1yfq_A          145 N---NTKVKNKIFTMDTNSS  161 (342)
T ss_dssp             S---SSSSCCCEEEEEECSS
T ss_pred             e---EEeeCCceEEEEecCC
Confidence            2   1114456777777543

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=96.23  E-value=0.0025  Score=48.13  Aligned_cols=77  Identities=14%  Similarity=0.155  Sum_probs=48.7

Q ss_pred             ccccceEEEeehhhhcC---CCCc-------c-cccccccccceeEEEeccCCCC----CCcce-ehhhhh--ccCCCCC
Q psy14121          3 GCDDGIIQMYNVDNIMS---GDNK-------V-DILSKKHSGPVRALDFNKFQVV----ATNFK-IRAHLW--RNLHHHF   64 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~---g~~~-------~-l~~~~KHtGpVraLdFNp~Q~N----gs~GE-I~~fIW--nn~~~P~   64 (118)
                      |..+|.|.|||...--.   .+..       . +.....|+++|.+|.|+|...-    +.||. |  .||  .+.....
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v--~iwd~~~~~~~~  232 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII--RVFKTEDGVLVR  232 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE--EEEETTTCCEEE
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE--EEEECCCCcEEE
Confidence            78899999999864210   0000       1 4567889999999999996655    78897 9  999  3222222


Q ss_pred             CCC-CCCCCcccceeeecCc
Q psy14121         65 RVP-GKKTFNLILGRLGLGQ   83 (118)
Q Consensus        65 t~P-G~ks~p~ei~~l~~~~   83 (118)
                      ++. |  ..+..+.+|.|..
T Consensus       233 ~~~~g--~h~~~v~~~~~s~  250 (355)
T 3vu4_A          233 EFRRG--LDRADVVDMKWST  250 (355)
T ss_dssp             EEECT--TCCSCEEEEEECT
T ss_pred             EEEcC--CCCCcEEEEEECC
Confidence            221 2  1335677777754

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=96.21  E-value=0.0047  Score=45.65  Aligned_cols=72  Identities=10%  Similarity=0.096  Sum_probs=48.3

Q ss_pred             ccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCC-CCCCCCCCCcc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHH-FRVPGKKTFNL   74 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P-~t~PG~ks~p~   74 (118)
                      |..||+|.|||.+.   +  ..+ .....|..+|.++.|+|...-    +.+|.|  .||  .+.... .++.+  ....
T Consensus       145 ~s~dg~i~~wd~~~---~--~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i--~iwd~~~~~~~~~~~~~--~h~~  215 (343)
T 3lrv_A          145 ADNRGTIGFQSYED---D--SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL--DVYNLSSPDQASSRFPV--DEEA  215 (343)
T ss_dssp             EETTCCEEEEESSS---S--CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE--EEEESSCTTSCCEECCC--CTTS
T ss_pred             EeCCCcEEEEECCC---C--cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE--EEEECCCCCCCccEEec--cCCC
Confidence            66899999999752   1  122 333556778999999996655    789999  999  444433 34333  1234


Q ss_pred             cceeeecCc
Q psy14121         75 ILGRLGLGQ   83 (118)
Q Consensus        75 ei~~l~~~~   83 (118)
                      .|.+|.|..
T Consensus       216 ~v~~l~fs~  224 (343)
T 3lrv_A          216 KIKEVKFAD  224 (343)
T ss_dssp             CEEEEEECT
T ss_pred             CEEEEEEeC
Confidence            677887754

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.21  E-value=0.0026  Score=47.24  Aligned_cols=52  Identities=13%  Similarity=0.328  Sum_probs=39.5

Q ss_pred             CccccceEEEeehhhhcCCCC-cccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDN-KVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~-~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||...-  +.. ..+...+.|+++|.+|.|+|....    +.|+.|  .||
T Consensus       124 s~s~D~~v~iwd~~~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i--~iW  180 (330)
T 2hes_X          124 TCSRDKSVWIWETDES--GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTV--RIW  180 (330)
T ss_dssp             EEETTSCEEEEECCTT--CCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCE--EEE
T ss_pred             EEeCCCEEEEEeccCC--CCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeE--EEE
Confidence            3668999999997421  111 123667889999999999997665    779999  999

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=96.20  E-value=0.0017  Score=46.36  Aligned_cols=54  Identities=13%  Similarity=0.211  Sum_probs=38.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||...--.-..-.......|.++|.+|.|+|....     +.+|.|  .||
T Consensus       229 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i--~iw  287 (357)
T 3i2n_A          229 ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGL--HLW  287 (357)
T ss_dssp             EEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE--EEE
T ss_pred             EECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcE--EEe
Confidence            367899999999864211000001234489999999999998774     789999  999

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=96.16  E-value=0.0026  Score=48.06  Aligned_cols=49  Identities=12%  Similarity=0.297  Sum_probs=38.0

Q ss_pred             Cccccce-EEEeehhhhcCCCCccccccc--ccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGI-IQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~-I~lwdp~kIL~g~~~~l~~~~--KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||+ |.|||...   +  ..+....  .|.++|.+|.|+|...-    +.++.|  .||
T Consensus       212 s~s~d~~~v~iwd~~~---~--~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v--~iw  267 (355)
T 3vu4_A          212 TCSQDGTIIRVFKTED---G--VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTL--HVF  267 (355)
T ss_dssp             EEETTCSEEEEEETTT---C--CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEE--EEE
T ss_pred             EEeCCCCEEEEEECCC---C--cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEE--EEE
Confidence            4678998 99999853   1  2234444  39999999999997665    788999  999

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=96.15  E-value=0.0026  Score=46.22  Aligned_cols=77  Identities=10%  Similarity=0.055  Sum_probs=43.1

Q ss_pred             CccccceEEEeehhhhcCCCC------c--cc-------ccccccccceeEEEeccCCCC----CCcceehhhhhccCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDN------K--VD-------ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRNLHH   62 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~------~--~l-------~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn~~~   62 (118)
                      .|..||.|.|||.........      .  .+       .....|.++|.+|.|+|...-    +.+|.|  .||+....
T Consensus        63 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i--~i~~~~~~  140 (425)
T 1r5m_A           63 YGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGEL--RLWNKTGA  140 (425)
T ss_dssp             EEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCE--EEEETTSC
T ss_pred             EecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeE--EEEeCCCC
Confidence            467899999999822211111      0  01       123348999999999996554    688999  99942222


Q ss_pred             C-CCCCCCCCCcccceeeecCc
Q psy14121         63 H-FRVPGKKTFNLILGRLGLGQ   83 (118)
Q Consensus        63 P-~t~PG~ks~p~ei~~l~~~~   83 (118)
                      + ..+.   .....+.+|.|..
T Consensus       141 ~~~~~~---~~~~~v~~~~~~~  159 (425)
T 1r5m_A          141 LLNVLN---FHRAPIVSVKWNK  159 (425)
T ss_dssp             EEEEEC---CCCSCEEEEEECT
T ss_pred             eeeecc---CCCccEEEEEECC
Confidence            2 2212   1334567777743

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=96.14  E-value=0.0026  Score=47.51  Aligned_cols=51  Identities=10%  Similarity=0.226  Sum_probs=39.0

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||...   +....+.....|+++|.+|.|+|....    +.|+.|  .||
T Consensus        78 s~s~D~~v~iw~~~~---~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v--~iw  132 (345)
T 3fm0_A           78 SASFDATTCIWKKNQ---DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSV--WVW  132 (345)
T ss_dssp             EEETTSCEEEEEECC---C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred             EEECCCcEEEEEccC---CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeE--EEE
Confidence            366899999999632   111223677889999999999996655    789999  999

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=96.12  E-value=0.003  Score=45.84  Aligned_cols=48  Identities=21%  Similarity=0.419  Sum_probs=38.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.|||.    .+  ..+.....|.++|.+|.|+|....    +.+|.|  .||
T Consensus       125 ~~~~dg~i~i~~~----~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~iw  176 (425)
T 1r5m_A          125 TGVENGELRLWNK----TG--ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVT--ILW  176 (425)
T ss_dssp             EEETTSCEEEEET----TS--CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCE--EEE
T ss_pred             EEeCCCeEEEEeC----CC--CeeeeccCCCccEEEEEECCCCCEEEEEecCCeE--EEE
Confidence            3678999999982    22  234677889999999999997665    778999  999

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=96.11  E-value=0.0035  Score=45.44  Aligned_cols=54  Identities=17%  Similarity=0.323  Sum_probs=37.5

Q ss_pred             CccccceEEEeehhhhcCCCCccc--------ccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD--------ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l--------~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.+.--.-.....        .....|.++|.+|.|+|...+     +.+|.|  .||
T Consensus        61 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i--~iw  127 (408)
T 4a11_B           61 SGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTL--KVW  127 (408)
T ss_dssp             EEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEE--EEE
T ss_pred             EEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeE--EEe
Confidence            467899999999864221110000        111359999999999997665     679999  999

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=96.06  E-value=0.003  Score=47.50  Aligned_cols=49  Identities=12%  Similarity=0.194  Sum_probs=37.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccc--cccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKK--HSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~K--HtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.+||...   +  ..+...+.  |.++|.+|.|+|....    +.+|.|  .||
T Consensus       187 ~~~~d~~i~iwd~~~---~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i--~iw  241 (437)
T 3gre_A          187 ALTNLSRVIIFDIRT---L--ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGII--DIW  241 (437)
T ss_dssp             EEETTSEEEEEETTT---C--CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEeCCC---C--eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeE--EEE
Confidence            467899999999854   1  22344444  9999999999998655    789999  999

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=96.06  E-value=0.0045  Score=44.20  Aligned_cols=76  Identities=14%  Similarity=0.010  Sum_probs=52.3

Q ss_pred             CccccceEEEeehhhhcCCCCc-ccccccccccceeEEEeccCCC-C----CCcceehhhhh-c-cCCCCCCCCCCCCCc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNK-VDILSKKHSGPVRALDFNKFQV-V----ATNFKIRAHLW-R-NLHHHFRVPGKKTFN   73 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~-~l~~~~KHtGpVraLdFNp~Q~-N----gs~GEI~~fIW-n-n~~~P~t~PG~ks~p   73 (118)
                      .|..||.|.|||.+.-   ... .+.....|.++|.+|.|+|... .    +.+|.|  +|| - .......+.+. ...
T Consensus        28 ~~~~d~~v~iw~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i--~~wd~~~~~~~~~~~~~-~~~  101 (342)
T 1yfq_A           28 ITSWDGSLTVYKFDIQ---AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI--LKVDLIGSPSFQALTNN-EAN  101 (342)
T ss_dssp             EEETTSEEEEEEEETT---TTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE--EEECSSSSSSEEECBSC-CCC
T ss_pred             EEcCCCeEEEEEeCCC---CccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeE--EEEEeccCCceEecccc-CCC
Confidence            3567899999998532   211 2355568999999999999888 5    779999  999 4 55555443221 144


Q ss_pred             ccceeeecCc
Q psy14121         74 LILGRLGLGQ   83 (118)
Q Consensus        74 ~ei~~l~~~~   83 (118)
                      ..|.+|.|..
T Consensus       102 ~~v~~l~~~~  111 (342)
T 1yfq_A          102 LGICRICKYG  111 (342)
T ss_dssp             SCEEEEEEET
T ss_pred             CceEEEEeCC
Confidence            5677887754

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=96.05  E-value=0.0028  Score=48.40  Aligned_cols=54  Identities=28%  Similarity=0.482  Sum_probs=39.5

Q ss_pred             CccccceEEEeehhhhcCCCCc----ccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNK----VDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~----~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||...-......    .+.....|+++|.+|+|++..=-  +.||.|  .||
T Consensus       351 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i--~iw  410 (435)
T 1p22_A          351 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTI--LIW  410 (435)
T ss_dssp             EEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEE--EEE
T ss_pred             EEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEE--EEE
Confidence            4678999999998765432211    23677899999999999542221  779999  999

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=96.04  E-value=0.0031  Score=47.74  Aligned_cols=51  Identities=14%  Similarity=0.273  Sum_probs=38.2

Q ss_pred             CccccceEEEeehhhhcCCCCc-cc-ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNK-VD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~-~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.|||...   ++.. .+ .....|.++|.+|.|+|...-    +.||.|  .||
T Consensus       315 ~g~~dg~i~vwd~~~---~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i--~iW  371 (380)
T 3iz6_a          315 AGYSNGDCYVWDTLL---AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNL--KIW  371 (380)
T ss_dssp             EECTTSCEEEEETTT---CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCE--EEE
T ss_pred             EEECCCCEEEEECCC---CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCE--EEE
Confidence            467899999999732   2111 12 223679999999999997776    789999  999

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=96.04  E-value=0.0036  Score=44.13  Aligned_cols=48  Identities=17%  Similarity=0.370  Sum_probs=38.6

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.+||.|.+||...     ...+...+.|.++|.+|.|+|....    +.+|.|  +||
T Consensus       159 ~~~dg~v~~~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i--~~~  210 (337)
T 1gxr_A          159 CCSDGNIAVWDLHN-----QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV--RSW  210 (337)
T ss_dssp             EETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EeCCCcEEEEeCCC-----CceeeeeecccCceEEEEECCCCCEEEEEecCCcE--EEE
Confidence            56899999999853     1233667779999999999996655    689999  999

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=96.01  E-value=0.0056  Score=47.22  Aligned_cols=73  Identities=11%  Similarity=0.167  Sum_probs=48.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccc-cccceeEEEecc----------CCCC----CCcceehhhhh--ccCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKK-HSGPVRALDFNK----------FQVV----ATNFKIRAHLW--RNLHHHF   64 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~K-HtGpVraLdFNp----------~Q~N----gs~GEI~~fIW--nn~~~P~   64 (118)
                      -|.+||.|.|||.+.-     ..+..... |.++|.+|.|+|          ...-    +.+|.|  +||  .+...+.
T Consensus       505 ~~~~dg~i~iw~~~~~-----~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i--~iw~~~~~~~~~  577 (615)
T 1pgu_A          505 AGDVMGKILLYDLQSR-----EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI--FIYSVKRPMKII  577 (615)
T ss_dssp             EEETTSCEEEEETTTT-----EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCE--EEEESSCTTCCE
T ss_pred             EcCCCCeEEEeeCCCC-----cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcE--EEEECCCCceec
Confidence            3668999999998531     12344454 999999999999          4444    678999  999  3332443


Q ss_pred             C-CCCCCCCcccceeeecCcc
Q psy14121         65 R-VPGKKTFNLILGRLGLGQS   84 (118)
Q Consensus        65 t-~PG~ks~p~ei~~l~~~~~   84 (118)
                      . +.|   ....|.+|.|...
T Consensus       578 ~~~~~---h~~~v~~l~~s~~  595 (615)
T 1pgu_A          578 KALNA---HKDGVNNLLWETP  595 (615)
T ss_dssp             EETTS---STTCEEEEEEEET
T ss_pred             hhhhc---CccceEEEEEcCC
Confidence            2 122   3456778877543

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=96.00  E-value=0.0031  Score=45.46  Aligned_cols=51  Identities=16%  Similarity=0.160  Sum_probs=39.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.+.-   +-..+.....|.++|.+|.|+|....    +.+|.|  .||
T Consensus        25 ~~~~d~~v~i~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i--~vw   79 (372)
T 1k8k_C           25 ICPNNHEVHIYEKSGN---KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA--YVW   79 (372)
T ss_dssp             EECSSSEEEEEEEETT---EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE--EEE
T ss_pred             EEeCCCEEEEEeCCCC---cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE--EEE
Confidence            3568999999997531   10133677789999999999996554    778999  999

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=95.91  E-value=0.0033  Score=46.76  Aligned_cols=47  Identities=15%  Similarity=0.181  Sum_probs=37.3

Q ss_pred             ccceEEEeehhhhcCCCCccc-------ccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          5 DDGIIQMYNVDNIMSGDNKVD-------ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         5 enG~I~lwdp~kIL~g~~~~l-------~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      +||.|.|||...-    ...+       .....|++.|.+|.|+|..++     +.+|.|  .||
T Consensus       196 ~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i--~iw  254 (447)
T 3dw8_B          196 DDLRINLWHLEIT----DRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI--RLC  254 (447)
T ss_dssp             CSSEEEEEETTEE----EEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE--EEE
T ss_pred             CCCeEEEEECCCC----CceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE--EEE
Confidence            7999999998631    0111       257789999999999999855     789999  999

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=95.91  E-value=0.0036  Score=51.20  Aligned_cols=53  Identities=15%  Similarity=0.126  Sum_probs=39.9

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||..+--. ..... .+...|++.|.+|.|+|....    +.+|.|  .||
T Consensus       400 s~s~D~~i~~W~~~~~~~-~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v--~vw  457 (694)
T 3dm0_A          400 SASRDKSIILWKLTKDDK-AYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL--RLW  457 (694)
T ss_dssp             EEETTSEEEEEECCCSTT-CSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EEeCCCcEEEEEccCCCc-ccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE--EEE
Confidence            467899999999753110 01112 567889999999999997665    779999  999

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=95.90  E-value=0.0039  Score=44.35  Aligned_cols=48  Identities=15%  Similarity=0.363  Sum_probs=36.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEe--ccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDF--NKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdF--Np~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.+.      ....+...|.++|.+|.|  +|....    +.+|.|  .||
T Consensus       103 s~~~dg~v~iwd~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i--~vw  156 (368)
T 3mmy_A          103 TASCDKTAKMWDLSS------NQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTL--KFW  156 (368)
T ss_dssp             EEETTSEEEEEETTT------TEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEE--EEE
T ss_pred             EEcCCCcEEEEEcCC------CCceeeccccCceEEEEEEeCCCCCEEEEccCCCcE--EEE
Confidence            367899999999753      224456779999999999  554443    779999  999

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=95.74  E-value=0.0055  Score=46.45  Aligned_cols=49  Identities=20%  Similarity=0.578  Sum_probs=39.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC------CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV------ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N------gs~GEI~~fIW   57 (118)
                      .|.+||+|.+||.+.   +  ..+.....|+++|.+|+|.+....      +.+|.|  .||
T Consensus       178 s~s~dg~i~vwd~~~---~--~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i--~vw  232 (464)
T 3v7d_B          178 SGSTDRTVRVWDIKK---G--CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL--HVW  232 (464)
T ss_dssp             EEETTSCEEEEETTT---T--EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCE--EEE
T ss_pred             EEeCCCCEEEEECCC---C--cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcE--EEe
Confidence            467899999999853   1  233667789999999999986543      789999  999

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=95.74  E-value=0.0055  Score=43.60  Aligned_cols=49  Identities=20%  Similarity=0.222  Sum_probs=39.1

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |..||.|.+||...-    ...+.....|.++|.+|.|+|....    +.+|.|  .||
T Consensus       193 ~~~dg~i~i~d~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~v~  245 (369)
T 3zwl_B          193 GHKDGKISKYDVSNN----YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNS--FLV  245 (369)
T ss_dssp             EETTSEEEEEETTTT----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EcCCCEEEEEECCCC----cEeEEEEecCCCceeEEEECCCCCEEEEecCCceE--EEE
Confidence            568899999998531    1234677789999999999997655    678999  999

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=95.71  E-value=0.0042  Score=46.24  Aligned_cols=54  Identities=13%  Similarity=0.207  Sum_probs=39.5

Q ss_pred             CccccceEEEeehhhhcCC-----CCc-ccccccccc------------cceeEEEeccCCC--C----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSG-----DNK-VDILSKKHS------------GPVRALDFNKFQV--V----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g-----~~~-~l~~~~KHt------------GpVraLdFNp~Q~--N----gs~GEI~~fIW   57 (118)
                      .|..||.|.|||.+..-..     .+- .+...+-|+            ++|.+|.|+|...  .    +.++.|  .||
T Consensus        45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i--~iw  122 (447)
T 3dw8_B           45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI--KLW  122 (447)
T ss_dssp             EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCE--EEE
T ss_pred             EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeE--EEE
Confidence            4678999999998654310     111 136677788            9999999999974  3    889999  999

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=95.66  E-value=0.0051  Score=46.84  Aligned_cols=48  Identities=15%  Similarity=0.245  Sum_probs=35.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW   57 (118)
                      +|-+||+|.|||++..      .....-+|.+.|.+|+|+|...-   ++++.+  .+|
T Consensus       152 s~~~d~~i~iwd~~~~------~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~--~~~  202 (365)
T 4h5i_A          152 SSKVPAIMRIIDPSDL------TEKFEIETRGEVKDLHFSTDGKVVAYITGSSL--EVI  202 (365)
T ss_dssp             ESCSSCEEEEEETTTT------EEEEEEECSSCCCEEEECTTSSEEEEECSSCE--EEE
T ss_pred             ECCCCCEEEEeECCCC------cEEEEeCCCCceEEEEEccCCceEEeccceeE--EEE
Confidence            4567999999998542      22223369999999999997666   667777  777

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=95.65  E-value=0.0061  Score=50.45  Aligned_cols=50  Identities=2%  Similarity=-0.063  Sum_probs=39.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWR   58 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWn   58 (118)
                      .|.+|++|.|||....     ..+.....|+++|.+|+|+|..+-    +.||.|  .||+
T Consensus       372 s~~~d~tv~lwd~~~~-----~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv--~lwd  425 (524)
T 2j04_B          372 YSDGASSLRAVPSRAA-----FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSL--IITN  425 (524)
T ss_dssp             EECSSSEEEEEETTCT-----TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEE--ECCB
T ss_pred             EeCCCCcEEEEECccc-----ccceeeecCCCceEEEEeCCCCCeEEEEECCCEE--EEEe
Confidence            4568899999997541     122456679999999999998776    789999  9994

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=95.57  E-value=0.0066  Score=44.39  Aligned_cols=76  Identities=7%  Similarity=-0.052  Sum_probs=44.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCC----CCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHH----FRVPGKKTF   72 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P----~t~PG~ks~   72 (118)
                      .|.+||.|.|||.+.--  .-........|.++|.+|.|+|....    +.++.|  .|| -+..++    ..+.+  ..
T Consensus        72 s~s~d~~v~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~iwd~~~~~~~~~~~~~~~--~h  145 (377)
T 3dwl_C           72 TCSQDRNAYVYEKRPDG--TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVI--SVCYFEQENDWWVSKHLKR--PL  145 (377)
T ss_dssp             EEETTSSEEEC--------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCE--EECCC-----CCCCEEECS--SC
T ss_pred             EEeCCCeEEEEEcCCCC--ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeE--EEEEECCcccceeeeEeec--cc
Confidence            35689999999985421  01123667789999999999996555    678999  999 222221    11111  13


Q ss_pred             cccceeeecCc
Q psy14121         73 NLILGRLGLGQ   83 (118)
Q Consensus        73 p~ei~~l~~~~   83 (118)
                      ...+.+|.|..
T Consensus       146 ~~~v~~~~~~~  156 (377)
T 3dwl_C          146 RSTILSLDWHP  156 (377)
T ss_dssp             CSCEEEEEECT
T ss_pred             CCCeEEEEEcC
Confidence            45677777754

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=95.49  E-value=0.0074  Score=44.14  Aligned_cols=48  Identities=25%  Similarity=0.272  Sum_probs=37.1

Q ss_pred             cccc---ceEEEeehhhhcCCCCcccccccc-------------cccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDD---GIIQMYNVDNIMSGDNKVDILSKK-------------HSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 Glen---G~I~lwdp~kIL~g~~~~l~~~~K-------------HtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.+|   |.|.+||...-     ..+.....             |.++|.+|.|+|....    +.+|.|  .||
T Consensus       251 ~~~d~~~g~i~i~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i--~iw  318 (397)
T 1sq9_A          251 AHDSNSFGCITLYETEFG-----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL--RFW  318 (397)
T ss_dssp             EEEETTEEEEEEEETTTC-----CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE--EEE
T ss_pred             EecCCCCceEEEEECCCC-----cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE--EEE
Confidence            5567   99999998531     12344444             9999999999997666    779999  999

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=95.46  E-value=0.01  Score=49.10  Aligned_cols=60  Identities=10%  Similarity=0.025  Sum_probs=40.9

Q ss_pred             CccccceEEEeehhhhcCCC------CcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGD------NKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHF   64 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~------~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~   64 (118)
                      .|..||+|.|||...-....      ........-|+++|.+|+|+|-. .    +.||.|  .||  +....|.
T Consensus       230 s~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV--~lWD~~~~~~~~  301 (524)
T 2j04_B          230 FVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFV--AEFDLTDPEVPS  301 (524)
T ss_dssp             EEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEE--EEEETTBCSSCS
T ss_pred             EEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEE--EEEECCCCCCce
Confidence            46789999999985421110      01123556799999999999742 3    789999  999  4444553

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=95.41  E-value=0.0077  Score=48.93  Aligned_cols=49  Identities=18%  Similarity=0.282  Sum_probs=38.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||+|.|||....     ..+.....|++.|.+|.|+|...-    +.|+.|  .||
T Consensus       165 s~s~D~~v~lwd~~~~-----~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i--~lw  217 (611)
T 1nr0_A          165 SGSDDNTVAIFEGPPF-----KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTI--VLY  217 (611)
T ss_dssp             EEETTSCEEEEETTTB-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEECCCC-----eEeeeeccccCceEEEEECCCCCEEEEEECCCcE--EEE
Confidence            3678999999995321     123667789999999999997655    789999  999

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=95.40  E-value=0.0064  Score=43.76  Aligned_cols=49  Identities=12%  Similarity=0.054  Sum_probs=39.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||...-     ..+.....|.++|.+|.|+|...-   +.++.|  +||
T Consensus       219 ~~~~d~~i~i~d~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i--~i~  270 (372)
T 1k8k_C          219 WVSHDSTVCLADADKK-----MAVATLASETLPLLAVTFITESSLVAAGHDCFP--VLF  270 (372)
T ss_dssp             EEETTTEEEEEEGGGT-----TEEEEEECSSCCEEEEEEEETTEEEEEETTSSC--EEE
T ss_pred             EEeCCCEEEEEECCCC-----ceeEEEccCCCCeEEEEEecCCCEEEEEeCCeE--EEE
Confidence            3568999999998642     234677789999999999996655   899999  999

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=95.35  E-value=0.0095  Score=45.26  Aligned_cols=49  Identities=14%  Similarity=0.299  Sum_probs=37.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccC---CCC-------CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKF---QVV-------ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~---Q~N-------gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...   +  ..+...+-|+++|.++.|.|-   .+.       +.||.|  .||
T Consensus       327 sgs~D~~v~iwd~~~---~--~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i--~iW  385 (393)
T 1erj_A          327 SGSKDRGVLFWDKKS---G--NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA--RIW  385 (393)
T ss_dssp             EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE--EEE
T ss_pred             EEeCCCeEEEEECCC---C--eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcE--EEC
Confidence            467899999999743   1  234667789999999999983   222       789999  999

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=95.14  E-value=0.019  Score=46.65  Aligned_cols=73  Identities=11%  Similarity=0.028  Sum_probs=47.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccc--cccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCC--CCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDI--LSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHF--RVPGKKT   71 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~--~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~--t~PG~ks   71 (118)
                      .|..|++|.|||...-  +  ..+.  ....|++.|.+|+|+|....    +.|+.|  .||  +.+..+.  .+.|.  
T Consensus       508 s~s~d~~v~~w~~~~~--~--~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v--~lW~~~~~~~~~~~~~~~h--  579 (611)
T 1nr0_A          508 ATDQSRKVIPYSVANN--F--ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV--IVWNMNKPSDHPIIIKGAH--  579 (611)
T ss_dssp             EEETTSCEEEEEGGGT--T--EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCE--EEEETTCTTSCCEEETTSS--
T ss_pred             EEcCCCCEEEEEcCCC--C--ceeeeeeeeecccceeEEEECCCCCEEEEEECCCcE--EEEECCCcccccchhhccC--
Confidence            3568999999998641  1  1111  23349999999999998776    789999  999  4444332  31221  


Q ss_pred             CcccceeeecC
Q psy14121         72 FNLILGRLGLG   82 (118)
Q Consensus        72 ~p~ei~~l~~~   82 (118)
                      ....+.+|.|.
T Consensus       580 ~~~~v~~v~fs  590 (611)
T 1nr0_A          580 AMSSVNSVIWL  590 (611)
T ss_dssp             TTSCEEEEEEE
T ss_pred             cccCeeEEEEc
Confidence            13456777774

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=95.01  E-value=0.013  Score=44.59  Aligned_cols=49  Identities=20%  Similarity=0.423  Sum_probs=37.0

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||...   +  ..+.....|+++|.+++|++..--  +.+|.|  .||
T Consensus       134 sg~~dg~i~vwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i--~vw  184 (445)
T 2ovr_B          134 SGSDDNTLKVWSAVT---G--KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL--KVW  184 (445)
T ss_dssp             EEETTSCEEEEETTT---C--CEEEECCCCSSCEEEEEEETTEEEEEETTSCE--EEE
T ss_pred             EEECCCcEEEEECCC---C--cEEEEEcCCCCCEEEEEecCCEEEEEeCCCeE--EEE
Confidence            467899999999853   1  233677789999999999831111  789999  999

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=94.92  E-value=0.014  Score=47.30  Aligned_cols=49  Identities=20%  Similarity=0.425  Sum_probs=39.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      -|.+||.|.|||...   +  ..+.....|.++|++|.|+|..+.    +.+|.|  .||
T Consensus        72 ~~~~dg~i~vw~~~~---~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i--~vw  124 (814)
T 3mkq_A           72 VGSDDFRIRVFNYNT---G--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV--KLW  124 (814)
T ss_dssp             EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEE--EEE
T ss_pred             EEeCCCeEEEEECCC---C--cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEE--EEE
Confidence            356799999999742   1  233667789999999999998877    778999  999

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=94.92  E-value=0.014  Score=49.23  Aligned_cols=54  Identities=17%  Similarity=0.172  Sum_probs=40.3

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.|||...--......+.....|.++|.++.|+|...-    +.+|.|  +||
T Consensus       224 s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I--~vw  281 (753)
T 3jro_A          224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV--TLW  281 (753)
T ss_dssp             EEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCE--ECC
T ss_pred             EEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEE--EEE
Confidence            366899999999864211111123666789999999999997666    789999  999

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=94.87  E-value=0.014  Score=50.32  Aligned_cols=49  Identities=18%  Similarity=0.340  Sum_probs=39.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      -|.+||+|.|||...   +  ..+...+.|+++|.+|.|+|....    +.+|.|  .||
T Consensus       632 s~~~d~~i~vw~~~~---~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v--~vw  684 (1249)
T 3sfz_A          632 SCGADKTLQVFKAET---G--EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKV--KIW  684 (1249)
T ss_dssp             EEETTSCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EEeCCCeEEEEECCC---C--CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeE--EEE
Confidence            356899999999843   1  234677789999999999997666    788999  999

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=94.84  E-value=0.023  Score=43.85  Aligned_cols=73  Identities=16%  Similarity=0.160  Sum_probs=47.8

Q ss_pred             ccccceEEEeehhhhcCCCCccccccccccc---ceeEEEeccC-CCC----CCcceehhhhh-ccCCCCC-CC-CCCCC
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSG---PVRALDFNKF-QVV----ATNFKIRAHLW-RNLHHHF-RV-PGKKT   71 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtG---pVraLdFNp~-Q~N----gs~GEI~~fIW-nn~~~P~-t~-PG~ks   71 (118)
                      |.+||.|.+||....     ..+.....|.+   +|.+|.|+|. ...    +.+|.|  .|| -...++. .+ .....
T Consensus       179 ~~~d~~v~vwd~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i--~vwd~~~~~~~~~~~~~~~~  251 (615)
T 1pgu_A          179 VGDDGSVVFYQGPPF-----KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI--SCFDGKSGEFLKYIEDDQEP  251 (615)
T ss_dssp             EETTTEEEEEETTTB-----EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE--EEEETTTCCEEEECCBTTBC
T ss_pred             EeCCCcEEEEeCCCc-----ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE--EEEECCCCCEeEEecccccc
Confidence            568999999996321     22366777999   9999999998 554    679999  999 2223332 21 10002


Q ss_pred             CcccceeeecC
Q psy14121         72 FNLILGRLGLG   82 (118)
Q Consensus        72 ~p~ei~~l~~~   82 (118)
                      ....+.+|.|.
T Consensus       252 ~~~~v~~~~~~  262 (615)
T 1pgu_A          252 VQGGIFALSWL  262 (615)
T ss_dssp             CCSCEEEEEES
T ss_pred             cCCceEEEEEc
Confidence            34557777774

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=94.46  E-value=0.02  Score=43.65  Aligned_cols=72  Identities=14%  Similarity=0.297  Sum_probs=44.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh-ccCCCC-CCCCCCCCCcccce
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW-RNLHHH-FRVPGKKTFNLILG   77 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW-nn~~~P-~t~PG~ks~p~ei~   77 (118)
                      .|..||.|.+||...   +  ..+.....|+++|.+|.|+...--  +.+|.|  .|| -...++ .++.|   ....+.
T Consensus       148 ~g~~dg~i~iwd~~~---~--~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i--~vwd~~~~~~~~~~~~---h~~~v~  217 (435)
T 1p22_A          148 SGLRDNTIKIWDKNT---L--ECKRILTGHTGSVLCLQYDERVIITGSSDSTV--RVWDVNTGEMLNTLIH---HCEAVL  217 (435)
T ss_dssp             EEESSSCEEEEESSS---C--CEEEEECCCSSCEEEEECCSSEEEEEETTSCE--EEEESSSCCEEEEECC---CCSCEE
T ss_pred             EEeCCCeEEEEeCCC---C--eEEEEEcCCCCcEEEEEECCCEEEEEcCCCeE--EEEECCCCcEEEEEcC---CCCcEE
Confidence            467899999999743   1  223667789999999999321101  789999  999 222222 12122   233466


Q ss_pred             eeecCc
Q psy14121         78 RLGLGQ   83 (118)
Q Consensus        78 ~l~~~~   83 (118)
                      +|.|..
T Consensus       218 ~l~~~~  223 (435)
T 1p22_A          218 HLRFNN  223 (435)
T ss_dssp             EEECCT
T ss_pred             EEEEcC
Confidence            666653

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=94.42  E-value=0.016  Score=46.02  Aligned_cols=76  Identities=9%  Similarity=-0.042  Sum_probs=49.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--c-cCCCCCCCCCC--CCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--R-NLHHHFRVPGK--KTF   72 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--n-n~~~P~t~PG~--ks~   72 (118)
                      .|..||+|.|||...-     ..+.....|...|.+|.|+|....    +.+|.|  .||  + ....-+..|-.  ...
T Consensus       167 s~s~Dg~v~iwD~~~~-----~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v--~iwd~~~~~~~~~~~~~~~~~~~  239 (434)
T 2oit_A          167 VCLADGSIAVLQVTET-----VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTV--VQYLPTLQEKKVIPCPPFYESDH  239 (434)
T ss_dssp             EEETTSCEEEEEESSS-----EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCE--EEECTTCCEEEEECCCTTCCTTS
T ss_pred             EEECCCeEEEEEcCCC-----cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcE--EEEccCCcccccccCCcccCCCC
Confidence            3678999999998532     122344568999999999998665    789999  999  3 11111111100  112


Q ss_pred             cccceeeecCcc
Q psy14121         73 NLILGRLGLGQS   84 (118)
Q Consensus        73 p~ei~~l~~~~~   84 (118)
                      +..+.+|.|...
T Consensus       240 ~~~v~~v~w~~~  251 (434)
T 2oit_A          240 PVRVLDVLWIGT  251 (434)
T ss_dssp             CEEEEEEEEEET
T ss_pred             ceeEEEEEEecC
Confidence            357888999653

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=94.36  E-value=0.053  Score=36.94  Aligned_cols=47  Identities=9%  Similarity=0.036  Sum_probs=37.1

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW   57 (118)
                      +-.++.|.+||.+.      ........|.+.|.++.|+|....   +.++.|  ++|
T Consensus        18 ~~~~~~i~~~d~~~------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i--~~~   67 (297)
T 2ojh_A           18 GSMRSSIEIFNIRT------RKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLL--YRL   67 (297)
T ss_dssp             CCCCEEEEEEETTT------TEEEEEEEESSCCEEEEECTTSSEEEEEETTEE--EEE
T ss_pred             CCcceeEEEEeCCC------CceeeeccCCcceEeeEECCCCCEEEEEcCCeE--EEE
Confidence            34689999999742      123455669999999999998776   778999  999

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=94.20  E-value=0.029  Score=42.65  Aligned_cols=74  Identities=12%  Similarity=0.249  Sum_probs=45.1

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh--ccCCCCCCCCCCCCCccccee
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW--RNLHHHFRVPGKKTFNLILGR   78 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei~~   78 (118)
                      |..||.|.+||...     ...+.....|.+.|.++.|++..--  +.+|.|  .||  .+.....++.+.......+.+
T Consensus       295 ~~~d~~i~i~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i--~vwd~~~~~~~~~~~~~~~~~~~v~~  367 (445)
T 2ovr_B          295 GSLDTSIRVWDVET-----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTV--KIWDIKTGQCLQTLQGPNKHQSAVTC  367 (445)
T ss_dssp             EETTSCEEEEETTT-----CCEEEEECCCCSCEEEEEEETTEEEEEETTSCE--EEEETTTCCEEEEECSTTSCSSCEEE
T ss_pred             EeCCCeEEEEECCC-----CCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeE--EEEECCCCcEEEEEccCCCCCCCEEE
Confidence            55678888887643     1123666788999999988642111  678999  999  232222222333334556777


Q ss_pred             eecCc
Q psy14121         79 LGLGQ   83 (118)
Q Consensus        79 l~~~~   83 (118)
                      +.|..
T Consensus       368 ~~~~~  372 (445)
T 2ovr_B          368 LQFNK  372 (445)
T ss_dssp             EEECS
T ss_pred             EEECC
Confidence            87754

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=93.84  E-value=0.023  Score=47.05  Aligned_cols=49  Identities=12%  Similarity=0.135  Sum_probs=35.0

Q ss_pred             CccccceEEEeehhhhcCCCCccccccccccccee-EEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVR-ALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVr-aLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||+|.|||...   |  ..+...+-|+..|. .|.|.|..+-    ..|+.|  .||
T Consensus       300 SgS~DgTIkIWDl~t---G--k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TI--klW  353 (356)
T 2w18_A          300 AILTSGTIAIWDLLL---G--QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNI--FVY  353 (356)
T ss_dssp             EEETTSCEEEEETTT---C--SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCE--EEE
T ss_pred             EEcCCCcEEEEECCC---C--cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcE--EEe
Confidence            456899999999832   2  12366667887655 5999997766    789999  999

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=93.78  E-value=0.031  Score=48.87  Aligned_cols=47  Identities=9%  Similarity=0.228  Sum_probs=35.6

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      -|..||+|.|||....      .......|+++|++|.|+| ..-    +.++.|  .||
T Consensus        34 sgs~Dg~I~lw~~~~~------~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v--~lW   84 (902)
T 2oaj_A           34 IATVTGEVHIYGQQQV------EVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTV--YVL   84 (902)
T ss_dssp             EEETTSEEEEECSTTC------EEEEECSSCCCEEEEEEET-TTEEEEEETTCEE--EEE
T ss_pred             EEeCCCEEEEEeCCCc------EEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeE--EEE
Confidence            4678999999997431      2222345899999999999 333    789999  999

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=93.73  E-value=0.029  Score=49.02  Aligned_cols=54  Identities=17%  Similarity=0.201  Sum_probs=38.0

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccc-----cccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILS-----KKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~-----~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      -|.+||+|.|||.+.-.-.....+ ...     ..|+++|.+|.|.|...-    +.+|.|  .||
T Consensus       452 Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV--~lw  515 (902)
T 2oaj_A          452 TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDV--VLF  515 (902)
T ss_dssp             EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCE--EEE
T ss_pred             EecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEE--EEE
Confidence            367899999999854210000111 111     279999999999998777    789999  999

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=93.72  E-value=0.057  Score=47.43  Aligned_cols=73  Identities=5%  Similarity=0.097  Sum_probs=48.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccc-----eeEEEeccCCCC----CCcceehhhhh----ccCCCC-----
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGP-----VRALDFNKFQVV----ATNFKIRAHLW----RNLHHH-----   63 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGp-----VraLdFNp~Q~N----gs~GEI~~fIW----nn~~~P-----   63 (118)
                      .+..||+|.|||.+.       .+.... |.++     |++|.|+|...-    +.||+|  -||    .....|     
T Consensus       102 s~s~dg~V~iwd~~~-------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtV--kIWd~~~~~l~~~~~i~l  171 (588)
T 2j04_A          102 VLSNNGNVSVFKDNK-------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGEL--QFFSIRKNSENTPEFYFE  171 (588)
T ss_dssp             EEETTSCEEEEETTE-------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEE--EEEECCCCTTTCCCCEEE
T ss_pred             EEeCCCcEEEEeCCc-------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEE--EEEECCCCccccccceee
Confidence            456899999999544       235555 7775     999999998777    779999  999    211122     


Q ss_pred             --CCCCCCCCCcccceeeecCcce
Q psy14121         64 --FRVPGKKTFNLILGRLGLGQSF   85 (118)
Q Consensus        64 --~t~PG~ks~p~ei~~l~~~~~~   85 (118)
                        +. .+......-|.+|+|....
T Consensus       172 ~ti~-~~~~gh~~~V~sVawSPdg  194 (588)
T 2j04_A          172 SSIR-LSDAGSKDWVTHIVWYEDV  194 (588)
T ss_dssp             EEEE-CSCTTCCCCEEEEEEETTE
T ss_pred             eeee-cccccccccEEEEEEcCCc
Confidence              21 1111134578888887543

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=93.54  E-value=0.039  Score=47.53  Aligned_cols=49  Identities=14%  Similarity=0.339  Sum_probs=39.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||...   +  ..+.....|+++|.++.|+|....    +.+|.|  .||
T Consensus       718 sg~~d~~v~vwd~~~---~--~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v--~vw  770 (1249)
T 3sfz_A          718 TGSNDFFLKLWDLNQ---K--ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL--RLW  770 (1249)
T ss_dssp             EEETTSCEEEEETTS---S--SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE--EEE
T ss_pred             EEeCCCeEEEEECCC---c--chhheecCCCCCEEEEEEecCCCEEEEEECCCeE--EEE
Confidence            467899999999743   1  233667789999999999997665    788999  999

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=92.94  E-value=0.068  Score=41.04  Aligned_cols=47  Identities=15%  Similarity=0.053  Sum_probs=35.1

Q ss_pred             ccccceEEEeehhhhcCCCCccccc-ccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~-~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |..||.|.|||...   +  ..+.. ...|+++|.+|.|+ ...-    +.++.|  .||
T Consensus       216 ~~~d~~i~vwd~~~---~--~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v--~vw  267 (450)
T 2vdu_B          216 SDRDEHIKISHYPQ---C--FIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKI--FAW  267 (450)
T ss_dssp             EETTSCEEEEEESC---T--TCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEE--EEE
T ss_pred             EcCCCcEEEEECCC---C--ceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeE--EEE
Confidence            56789999999742   1  12333 56799999999999 3333    789999  999

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=92.48  E-value=0.062  Score=41.27  Aligned_cols=53  Identities=11%  Similarity=-0.059  Sum_probs=36.5

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...- .+..........|.+.|.+|.|+|....    +.+|.|  ++|
T Consensus       120 ~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v--~~~  176 (450)
T 2vdu_B          120 CADSDKSLLVFDVDKT-SKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDV--YSI  176 (450)
T ss_dssp             EEGGGTEEEEEEECSS-SSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EECCCCeEEEEECcCC-CCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcE--EEE
Confidence            3568999999998420 1111111233467899999999997766    567889  999

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=92.16  E-value=0.1  Score=38.75  Aligned_cols=49  Identities=4%  Similarity=0.044  Sum_probs=38.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .+.++|.|.+||.+.     ...+.+...|...|.++.|+|....     ..++.|  ++|
T Consensus       186 s~~~d~~v~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i--~~~  239 (433)
T 3bws_A          186 SQMQANAVHVFDLKT-----LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDI--SVI  239 (433)
T ss_dssp             EEGGGTEEEEEETTT-----CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEE--EEE
T ss_pred             EECCCCEEEEEECCC-----ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcE--EEE
Confidence            466899999999842     1223566689999999999998776     368999  999

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=90.34  E-value=0.066  Score=39.82  Aligned_cols=51  Identities=14%  Similarity=0.219  Sum_probs=36.8

Q ss_pred             CccccceEEEeehhhhcCCCCcc-c--ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKV-D--ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~-l--~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      ++.++|.|.+||++.   ++... .  .....|.+.|.++.|.|...-    ..++.|  ++|
T Consensus       139 ~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v--~~~  196 (433)
T 3bws_A          139 PLLEDEGMDVLDINS---GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAV--HVF  196 (433)
T ss_dssp             EBTTSSSEEEEETTT---CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEE--EEE
T ss_pred             EeCCCCeEEEEECCC---CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEE--EEE
Confidence            456789999999753   22111 1  255689999999999775544    667999  999

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=89.34  E-value=0.23  Score=36.38  Aligned_cols=48  Identities=10%  Similarity=0.003  Sum_probs=35.0

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||.+.-     ..+.....| +.|.++.|+|....     ..++.|  .||
T Consensus         7 s~~~d~~v~v~d~~~~-----~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i--~v~   59 (391)
T 1l0q_A            7 ANSESDNISVIDVTSN-----KVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDV--SII   59 (391)
T ss_dssp             EETTTTEEEEEETTTT-----EEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEE--EEE
T ss_pred             EcCCCCEEEEEECCCC-----eEEEEeecC-CCcceEEECCCCCEEEEECCCCCeE--EEE
Confidence            4678999999998531     122334444 45899999998876     478999  999

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=87.84  E-value=0.37  Score=35.22  Aligned_cols=48  Identities=2%  Similarity=-0.007  Sum_probs=34.0

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .+..+|.|.+||.+.      ..+.+.-.+.+.|.++.|+|....     ..++.|  +||
T Consensus        49 ~~~~d~~i~v~d~~~------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v--~v~  101 (391)
T 1l0q_A           49 ANAHSNDVSIIDTAT------NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTL--SVI  101 (391)
T ss_dssp             EEGGGTEEEEEETTT------TEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEE--EEE
T ss_pred             ECCCCCeEEEEECCC------CeEEEEEECCCCccceEECCCCCEEEEEECCCCEE--EEE
Confidence            355789999999843      123222233449999999998776     356999  999

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=86.48  E-value=0.31  Score=34.34  Aligned_cols=50  Identities=12%  Similarity=0.211  Sum_probs=35.9

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CC-cceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----AT-NFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs-~GEI~~fIW   57 (118)
                      +..+|.|.+||.+.  .+.. .......|.+.+.+|.|+|....    +. ++.|  .||
T Consensus        11 ~~~~~~v~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v--~~~   65 (343)
T 1ri6_A           11 SPESQQIHVWNLNH--EGAL-TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV--LAY   65 (343)
T ss_dssp             EGGGTEEEEEEECT--TSCE-EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEE--EEE
T ss_pred             CCCCCeEEEEEECC--CCcE-EEeeeEecCCCCceEEECCCCCEEEEeecCCCeE--EEE
Confidence            45789999999854  2221 12344568889999999998776    33 3899  999

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=86.32  E-value=0.31  Score=42.82  Aligned_cols=75  Identities=9%  Similarity=0.062  Sum_probs=46.9

Q ss_pred             CccccceEEEeehhhhcCCCCc--cccc----ccccccceeEEEeccCCCC---CCcceehhhhh-ccCCC----CCCC-
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNK--VDIL----SKKHSGPVRALDFNKFQVV---ATNFKIRAHLW-RNLHH----HFRV-   66 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~--~l~~----~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW-nn~~~----P~t~-   66 (118)
                      -|.+||+|.|||+..=.-.+..  .+..    ..-|.+.|.+|+|.|.. -   +.|+.|  ++| -+-..    +-++ 
T Consensus       146 sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tV--rlWd~~~~~~~~~~~tL~  222 (588)
T 2j04_A          146 VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSV--FSMTVSASSHQPVSRMIQ  222 (588)
T ss_dssp             EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCE--EEECCCSSSSCCCEEEEE
T ss_pred             EEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeE--EEEECCCCccccceeeec
Confidence            4789999999998641000000  1122    35688999999999977 6   788999  999 21111    1121 


Q ss_pred             CCCCCCcccceeeecC
Q psy14121         67 PGKKTFNLILGRLGLG   82 (118)
Q Consensus        67 PG~ks~p~ei~~l~~~   82 (118)
                      +|   ....+.+|+|.
T Consensus       223 ~~---h~~~V~svaFs  235 (588)
T 2j04_A          223 NA---SRRKITDLKIV  235 (588)
T ss_dssp             CC---CSSCCCCEEEE
T ss_pred             cc---ccCcEEEEEEE
Confidence            33   33667777774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	118
d1tbga_	340	beta1-subunit of the signal-transducing G protein	97.66
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	97.58
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	97.48
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	97.37
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	97.34
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	97.32
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	97.21
d1tbga_	340	beta1-subunit of the signal-transducing G protein	97.16
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	96.9
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	96.89
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	96.88
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	96.72
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	96.68
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	96.67
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	96.61
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	96.61
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	96.56
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	96.5
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	96.4
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	96.31
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	96.29
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	96.06
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	96.01
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	95.89
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	95.66
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	95.57
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	95.32
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	95.14
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	93.09
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	92.99
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	92.65
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	91.42
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	90.71
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	84.34
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	81.97
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	81.1

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.66  E-value=1.2e-05  Score=54.53  Aligned_cols=50  Identities=14%  Similarity=0.204  Sum_probs=40.4

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWR   58 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWn   58 (118)
                      .|.+||.|.|||...   +  +.+.....|+++|.+|+|+|...-    +.||.|  .||+
T Consensus       287 ~g~~dg~i~iwd~~~---~--~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v--~iWd  340 (340)
T d1tbga_         287 AGYDDFNCNVWDALK---A--DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL--KIWN  340 (340)
T ss_dssp             EEETTSCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSCEEEEETTSCE--EEEC
T ss_pred             EEECCCEEEEEECCC---C--cEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEE--EEeC
Confidence            467899999999743   1  234777889999999999997766    678999  9993

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.58  E-value=1.8e-05  Score=52.19  Aligned_cols=49  Identities=20%  Similarity=0.383  Sum_probs=39.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...   +  ..+...+.|+++|.+|+|+|....    +.||.|  .||
T Consensus       264 s~~~dg~i~iwd~~~---~--~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i--~iW  316 (317)
T d1vyhc1         264 SCADDKTLRVWDYKN---K--RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV--KVW  316 (317)
T ss_dssp             EEETTTEEEEECCTT---S--CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEE--EEE
T ss_pred             EEECCCeEEEEECCC---C--cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeE--EEe
Confidence            467899999999743   1  234777889999999999998776    788999  998

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.48  E-value=1.8e-05  Score=52.61  Aligned_cols=52  Identities=17%  Similarity=0.080  Sum_probs=39.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      -|..||+|.|||.+.-  .....+.....|+++|.+|.|+|....     +.+|.|  .+|
T Consensus        28 s~s~Dg~v~iwd~~~~--~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v--~~w   84 (342)
T d1yfqa_          28 ITSWDGSLTVYKFDIQ--AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI--LKV   84 (342)
T ss_dssp             EEETTSEEEEEEEETT--TTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE--EEE
T ss_pred             EEECCCeEEEEEccCC--CcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccce--eee
Confidence            3668999999997541  111123445579999999999998776     689999  999

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.37  E-value=6.7e-05  Score=51.13  Aligned_cols=72  Identities=11%  Similarity=0.127  Sum_probs=49.5

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC--------------CCcceehhhhh--ccCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV--------------ATNFKIRAHLW--RNLHHHF   64 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N--------------gs~GEI~~fIW--nn~~~P~   64 (118)
                      .|..||.|.|||...-     ... .+...|+++|.+|.|+|....              +.|+.|  +||  .++...+
T Consensus       179 ~g~~dg~i~i~d~~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i--~iw~~~~~~~~~  251 (287)
T d1pgua2         179 AGDVMGKILLYDLQSR-----EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI--FIYSVKRPMKII  251 (287)
T ss_dssp             EEETTSCEEEEETTTT-----EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCE--EEEESSCTTCCE
T ss_pred             cccccccccceeeccc-----ccccccccccccccceeeecccccccccccCCCCeeEeecCCCeE--EEEECCCCCeEE
Confidence            4678999999998431     122 567889999999999996542              678999  999  5555554


Q ss_pred             CCCCCCCCcccceeeecC
Q psy14121         65 RVPGKKTFNLILGRLGLG   82 (118)
Q Consensus        65 t~PG~ks~p~ei~~l~~~   82 (118)
                      ..+  ......|.+|.|.
T Consensus       252 ~~~--~~h~~~V~~v~~~  267 (287)
T d1pgua2         252 KAL--NAHKDGVNNLLWE  267 (287)
T ss_dssp             EET--TSSTTCEEEEEEE
T ss_pred             EEe--CCCCCCeEEEEEC
Confidence            322  1234567788774

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.34  E-value=4.9e-05  Score=51.10  Aligned_cols=49  Identities=29%  Similarity=0.517  Sum_probs=38.1

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW   57 (118)
                      -|.+||+|.|||...   +  ..+.+.+.|+++|.+|+|.|-+.=   +.||.|  .||
T Consensus        28 tgs~Dg~i~vWd~~~---~--~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i--~iw   79 (355)
T d1nexb2          28 TGADDKMIRVYDSIN---K--KFLLQLSGHDGGVWALKYAHGGILVSGSTDRTV--RVW   79 (355)
T ss_dssp             EEETTTEEEEEETTT---T--EEEEEEECCSSCEEEEEEETTTEEEEEETTCCE--EEE
T ss_pred             EEeCCCeEEEEECCC---C--cEEEEEECCCCCEEEEEEcCCCEEEEEeccccc--ccc
Confidence            367899999999843   1  234777889999999999873211   789999  999

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.32  E-value=3.9e-05  Score=55.52  Aligned_cols=50  Identities=16%  Similarity=0.215  Sum_probs=38.6

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.+||.|.|||.+.   ++-..+...+.|+++|++|+|+|...-    +.|+.|  +||
T Consensus        25 ~~~~~~i~iw~~~~---~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i--~vW   78 (371)
T d1k8kc_          25 CPNNHEVHIYEKSG---NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA--YVW   78 (371)
T ss_dssp             ECSSSEEEEEEEET---TEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE--EEE
T ss_pred             EeCCCEEEEEECCC---CCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeE--EEE
Confidence            67899999999742   111123667889999999999996654    678999  999

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=5.3e-05  Score=49.50  Aligned_cols=49  Identities=16%  Similarity=0.494  Sum_probs=37.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW   57 (118)
                      -|.+||+|.|||.+.   +  ..+...+.|+++|.+|.|++..=-  +.||.|  .||
T Consensus        30 sgs~Dg~i~vWd~~~---~--~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i--~~~   80 (293)
T d1p22a2          30 SGLRDNTIKIWDKNT---L--ECKRILTGHTGSVLCLQYDERVIITGSSDSTV--RVW   80 (293)
T ss_dssp             EEESSSCEEEEESSS---C--CEEEEECCCSSCEEEEECCSSEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEECCC---C--cEEEEEecCCCCEeeeecccceeecccccccc--ccc
Confidence            478899999999743   1  233677789999999999752111  789999  999

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.16  E-value=0.00012  Score=49.29  Aligned_cols=74  Identities=11%  Similarity=0.115  Sum_probs=48.9

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI   75 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e   75 (118)
                      .|..||.|.+||...-     ..+.....|+++|.+|.|+|...-    +.+|.|  .+|  ........ .........
T Consensus       201 ~~~~d~~v~i~d~~~~-----~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i--~~~~~~~~~~~~~-~~~~~~~~~  272 (340)
T d1tbga_         201 SGACDASAKLWDVREG-----MCRQTFTGHESDINAICFFPNGNAFATGSDDATC--RLFDLRADQELMT-YSHDNIICG  272 (340)
T ss_dssp             EEETTTEEEEEETTTT-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEEETTTTEEEEE-ECCTTCCSC
T ss_pred             EeecCceEEEEECCCC-----cEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeE--EEEeecccccccc-cccccccCc
Confidence            4678999999997431     233667789999999999996655    678999  999  33322222 112233444


Q ss_pred             ceeeecCc
Q psy14121         76 LGRLGLGQ   83 (118)
Q Consensus        76 i~~l~~~~   83 (118)
                      +.++.|..
T Consensus       273 i~~~~~s~  280 (340)
T d1tbga_         273 ITSVSFSK  280 (340)
T ss_dssp             EEEEEECS
T ss_pred             eEEEEECC
Confidence            66666644

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00022  Score=46.44  Aligned_cols=54  Identities=28%  Similarity=0.487  Sum_probs=39.4

Q ss_pred             CccccceEEEeehhhhcCCCC---c-ccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDN---K-VDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~---~-~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||.........   . .+....-|+++|.+|.|++..=-  +.||.|  .||
T Consensus       233 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i--~iW  292 (293)
T d1p22a2         233 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTI--LIW  292 (293)
T ss_dssp             EEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEE--EEE
T ss_pred             EEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCCEEEEEecCCEE--EEe
Confidence            467899999999766543321   1 22566789999999999864322  778999  999

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00031  Score=49.67  Aligned_cols=50  Identities=6%  Similarity=0.193  Sum_probs=36.8

Q ss_pred             cceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          6 DGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         6 nG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      ||.|.|||.+.--............|+++|++|.|+|...-    +.+|.|  .||
T Consensus        71 dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i--~iw  124 (337)
T d1gxra_          71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL--SIW  124 (337)
T ss_dssp             BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE--EEE
T ss_pred             CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccc--ccc
Confidence            79999999754221111112556789999999999997655    689999  999

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.88  E-value=0.00019  Score=48.80  Aligned_cols=51  Identities=22%  Similarity=0.249  Sum_probs=39.0

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhhc
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLWR   58 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIWn   58 (118)
                      .|..||.|.|||.++-    ...+.....|+++|.+|.|+|...=   +.||.|  .||+
T Consensus       232 sgs~D~~i~iw~~~~~----~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v--~iW~  285 (287)
T d1pgua2         232 TGSLDTNIFIYSVKRP----MKIIKALNAHKDGVNNLLWETPSTLVSSGADACI--KRWN  285 (287)
T ss_dssp             EEETTSCEEEEESSCT----TCCEEETTSSTTCEEEEEEEETTEEEEEETTSCE--EEEE
T ss_pred             eecCCCeEEEEECCCC----CeEEEEeCCCCCCeEEEEECCCCEEEEEECCCeE--EEEE
Confidence            3668999999997541    1233666789999999999985432   899999  9993

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.72  E-value=0.00066  Score=46.10  Aligned_cols=51  Identities=14%  Similarity=0.137  Sum_probs=39.0

Q ss_pred             CccccceEEEeehhhhcCCCCc-ccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNK-VDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~-~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.+||...   +... .......|+.+|.+|.|+|...-    +.||.|  +||
T Consensus       196 ~~~~d~~i~~~~~~~---~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i--~iw  251 (299)
T d1nr0a2         196 ATDQSRKVIPYSVAN---NFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV--IVW  251 (299)
T ss_dssp             EEETTSCEEEEEGGG---TTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred             ccccccccccccccc---cccccccccccccccccccccccccccceEEEcCCCEE--EEE
Confidence            356899999999854   1111 12556779999999999997766    678999  999

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.68  E-value=0.00041  Score=46.40  Aligned_cols=46  Identities=17%  Similarity=0.271  Sum_probs=33.5

Q ss_pred             ccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121          5 DDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW   57 (118)
Q Consensus         5 enG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW   57 (118)
                      .||.|.|||.+.   |  +.+ .....|+++|.+|.|+|..--   +.||++  |||
T Consensus       301 ~d~~i~vwd~~t---g--~~~~~~~~~~~~~V~~v~~~~~~~~~~~s~dg~~--~l~  350 (355)
T d1nexb2         301 SENQFNIYNLRS---G--KLVHANILKDADQIWSVNFKGKTLVAAVEKDGQS--FLE  350 (355)
T ss_dssp             ETTEEEEEETTT---C--CBCCSCTTTTCSEEEEEEEETTEEEEEEESSSCE--EEE
T ss_pred             eCCEEEEEECCC---C--CEEEEEecCCCCCEEEEEEcCCeEEEEEECCCcE--EEE
Confidence            578899998642   2  123 456779999999999984211   679999  998

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00046  Score=45.91  Aligned_cols=49  Identities=20%  Similarity=0.423  Sum_probs=37.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW   57 (118)
                      -|.+||+|.|||...   +  +.+.....|+++|.+|+|+|..--  +.|+.+  .+|
T Consensus        32 sgs~Dg~i~vWd~~~---~--~~~~~~~~h~~~V~~v~~~~~~l~s~s~D~~~--~~~   82 (342)
T d2ovrb2          32 SGSDDNTLKVWSAVT---G--KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL--KVW   82 (342)
T ss_dssp             EEETTSCEEEEETTT---C--CEEEECCCCSSCEEEEEEETTEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEECCC---C--CEEEEEeCCCCCEEEEEeCCCccccceecccc--ccc
Confidence            367899999999743   2  234777889999999999873111  788999  888

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.61  E-value=0.0014  Score=42.82  Aligned_cols=71  Identities=17%  Similarity=0.265  Sum_probs=49.4

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCCC-CCCCCCCCcccc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHHF-RVPGKKTFNLIL   76 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P~-t~PG~ks~p~ei   76 (118)
                      |..||.|.+||...     ...+.+...|.++|.++.|.|...-    +.+|.|  .|| -...++. ++.|   ....|
T Consensus       223 ~~~d~~i~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i--~iwd~~~~~~~~~~~~---h~~~V  292 (317)
T d1vyhc1         223 GSRDKTIKMWDVST-----GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL--RVWDYKNKRCMKTLNA---HEHFV  292 (317)
T ss_dssp             EETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEE--EEECCTTSCCCEEEEC---CSSCE
T ss_pred             ccCCCEEEEEECCC-----CcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeE--EEEECCCCcEEEEEcC---CCCCE
Confidence            56789999999743     1234677889999999999998766    679999  999 2223332 2222   23457


Q ss_pred             eeeecCc
Q psy14121         77 GRLGLGQ   83 (118)
Q Consensus        77 ~~l~~~~   83 (118)
                      .+|.|..
T Consensus       293 ~~~~~s~  299 (317)
T d1vyhc1         293 TSLDFHK  299 (317)
T ss_dssp             EEEEECS
T ss_pred             EEEEEcC
Confidence            7888753

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.61  E-value=0.0012  Score=44.73  Aligned_cols=75  Identities=9%  Similarity=0.156  Sum_probs=47.4

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCcccc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLIL   76 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei   76 (118)
                      |.+||.|.+||.+.    ..........|+++|.+|.|+|....    +.+|.|  .+|  .+......+..-......|
T Consensus       154 g~~dg~i~~~d~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i--~~~~~~~~~~~~~~~~~~~h~~~v  227 (299)
T d1nr0a2         154 GGQDSKVHVYKLSG----ASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKV--IPYSVANNFELAHTNSWTFHTAKV  227 (299)
T ss_dssp             EETTSEEEEEEEET----TEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCE--EEEEGGGTTEESCCCCCCCCSSCE
T ss_pred             cccccccccccccc----cccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc
Confidence            56899999999642    11111456789999999999997766    678999  999  2211111100011224567


Q ss_pred             eeeecCc
Q psy14121         77 GRLGLGQ   83 (118)
Q Consensus        77 ~~l~~~~   83 (118)
                      .||.|..
T Consensus       228 ~~l~~s~  234 (299)
T d1nr0a2         228 ACVSWSP  234 (299)
T ss_dssp             EEEEECT
T ss_pred             ccccccc
Confidence            7888754

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.00093  Score=44.37  Aligned_cols=75  Identities=12%  Similarity=0.250  Sum_probs=47.7

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh--ccCCCCCCCCCCCCCccccee
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW--RNLHHHFRVPGKKTFNLILGR   78 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei~~   78 (118)
                      |..||.|.+||...     ...+.....|...|.++.|++..=-  +.+|.|  .||  .+......+.+.......+.+
T Consensus       193 ~~~dg~i~~~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i--~iwd~~~~~~~~~~~~~~~~~~~~~~  265 (342)
T d2ovrb2         193 GSLDTSIRVWDVET-----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTV--KIWDIKTGQCLQTLQGPNKHQSAVTC  265 (342)
T ss_dssp             EETTSCEEEEETTT-----CCEEEEECCCCSCEEEEEEETTEEEEEETTSCE--EEEETTTCCEEEEECSTTSCSSCEEE
T ss_pred             EeCCCeEEEeeccc-----ceeeeEecccccceeEEecCCCEEEEEcCCCEE--EEEecccccccccccccceeeeceee
Confidence            56788999998742     1234778889999999999872111  789999  999  333332222333334455556


Q ss_pred             eecCcc
Q psy14121         79 LGLGQS   84 (118)
Q Consensus        79 l~~~~~   84 (118)
                      +.++..
T Consensus       266 ~~~~~~  271 (342)
T d2ovrb2         266 LQFNKN  271 (342)
T ss_dssp             EEECSS
T ss_pred             cccCCC
Confidence            666543

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.50  E-value=0.00041  Score=49.70  Aligned_cols=54  Identities=22%  Similarity=0.325  Sum_probs=38.1

Q ss_pred             CccccceEEEeehhhhcCCC--CcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGD--NKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~--~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.|||...--.-.  .....+...|+++|.+|.|+|-...    +.||.|  .||
T Consensus       206 ~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v--~iw  265 (311)
T d1nr0a1         206 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI--KIW  265 (311)
T ss_dssp             EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeE--EEE
Confidence            36689999999975311000  0111455679999999999986655    678999  999

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.40  E-value=0.00098  Score=46.44  Aligned_cols=49  Identities=14%  Similarity=0.348  Sum_probs=37.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEecc---CCCC-------CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNK---FQVV-------ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp---~Q~N-------gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...   +  ..+...+.|+++|.+|++.+   +.+.       +.||.|  .||
T Consensus       325 sg~~dg~i~vwd~~~---~--~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I--~iW  383 (388)
T d1erja_         325 SGSKDRGVLFWDKKS---G--NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA--RIW  383 (388)
T ss_dssp             EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE--EEE
T ss_pred             EEeCCCEEEEEECCC---C--cEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEE--EEE
Confidence            467899999999742   1  23477888999999998764   2223       779999  999

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.00091  Score=47.14  Aligned_cols=48  Identities=15%  Similarity=0.206  Sum_probs=37.0

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|.+||.|.|||...      .......+|.++|.+++|.|...-    +.||.|  .||
T Consensus       282 s~s~Dg~i~iwd~~~------~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I--~vW  333 (337)
T d1gxra_         282 STGKDNLLNAWRTPY------GASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA--TVY  333 (337)
T ss_dssp             EEETTSEEEEEETTT------CCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE--EEE
T ss_pred             EEeCCCeEEEEECCC------CCEEEEccCCCCEEEEEEeCCCCEEEEEeCCCeE--EEE
Confidence            356889999999642      123445679999999999986555    678999  999

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.29  E-value=0.003  Score=45.04  Aligned_cols=73  Identities=11%  Similarity=0.174  Sum_probs=45.2

Q ss_pred             CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC---C---Ccceehhhhh-ccCCCC-CCCCCCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV---A---TNFKIRAHLW-RNLHHH-FRVPGKKTF   72 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N---g---s~GEI~~fIW-nn~~~P-~t~PG~ks~   72 (118)
                      -|..||+|.|||...    ..... .....|+++|.+|.|+|....   +   .+..+  .|| -+..++ .++.|   .
T Consensus        75 tg~~dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~--~v~~~~~~~~~~~l~~---h  145 (311)
T d1nr0a1          75 SGDVHGNVRIWDTTQ----TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG--HVFLFDTGTSNGNLTG---Q  145 (311)
T ss_dssp             EEETTSEEEEEESSS----TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE--EEEETTTCCBCBCCCC---C
T ss_pred             ccccCceEeeeeeec----cccccccccccccCccccccccccccccccccccccccc--cccccccccccccccc---c
Confidence            367899999999754    12222 557789999999999998766   2   23335  566 222233 22112   2


Q ss_pred             cccceeeecCc
Q psy14121         73 NLILGRLGLGQ   83 (118)
Q Consensus        73 p~ei~~l~~~~   83 (118)
                      ...|.+|.|..
T Consensus       146 ~~~v~~v~~~~  156 (311)
T d1nr0a1         146 ARAMNSVDFKP  156 (311)
T ss_dssp             SSCEEEEEECS
T ss_pred             ccccccccccc
Confidence            34567777754

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.06  E-value=0.0016  Score=44.32  Aligned_cols=51  Identities=14%  Similarity=0.206  Sum_probs=40.0

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCC
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHH   63 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P   63 (118)
                      .+.++|.|.+||.+.         .+...|.+.|.+++|.|....    +.||.|  +||  +++..+
T Consensus       293 ~~~~~~~i~~~d~~~---------~~~~~~~~~v~~~~~SpDG~~l~~~~~Dg~i--~v~d~~~~~~~  349 (360)
T d1k32a3         293 GAPEKGVLLKYDVKT---------RKVTEVKNNLTDLRLSADRKTVMVRKDDGKI--YTFPLEKPEDE  349 (360)
T ss_dssp             CCCCCEEEEEEETTT---------CCEEEEEEEEEEEEECTTSCEEEEEETTSCE--EEEESSCTTSC
T ss_pred             ecCCCCEEEEEECCC---------CeEEEecCCcCEEEECCCCCEEEEEECCCeE--EEEECCCCCcc
Confidence            466889999999643         345678899999999997776    679999  999  555443

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.01  E-value=0.0013  Score=47.61  Aligned_cols=49  Identities=24%  Similarity=0.330  Sum_probs=34.1

Q ss_pred             ceEEEeehhhh-----cCCC---CcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          7 GIIQMYNVDNI-----MSGD---NKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         7 G~I~lwdp~kI-----L~g~---~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      +.|.|||++.-     |...   ........-|++.|.+|+|+|...-    +.|+.|  .||
T Consensus       256 ~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v--~vW  316 (393)
T d1sq9a_         256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL--RFW  316 (393)
T ss_dssp             EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE--EEE
T ss_pred             ceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEE--EEE
Confidence            46999998631     1111   1122556679999999999997665    789999  999

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.89  E-value=0.0013  Score=47.72  Aligned_cols=54  Identities=19%  Similarity=0.260  Sum_probs=34.0

Q ss_pred             CccccceEEEeehhhhcCCCC-cccccccccccceeEEEeccCCCC---C----Ccceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDN-KVDILSKKHSGPVRALDFNKFQVV---A----TNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~-~~l~~~~KHtGpVraLdFNp~Q~N---g----s~GEI~~fIW   57 (118)
                      -|.+||+|.|||...--.-.. ........|+.+|++|.|.|-..-   |    +.+.|  .||
T Consensus       200 sgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i--~lw  261 (393)
T d1sq9a_         200 TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI--TLY  261 (393)
T ss_dssp             EECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEE--EEE
T ss_pred             EEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCccee--eec
Confidence            367899999999863210000 011455679999999999996655   2    23468  889

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.66  E-value=0.0017  Score=46.65  Aligned_cols=76  Identities=9%  Similarity=0.049  Sum_probs=48.4

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCC-CCCCccc
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPG-KKTFNLI   75 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG-~ks~p~e   75 (118)
                      |..||+|.|||...   +..........|+++|.+++|+|...-    ..++.|  .||  ........+.. .+.....
T Consensus        69 ~s~D~~i~vWd~~~---~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i--~i~~~~~~~~~~~~~~~~~~~~~~  143 (371)
T d1k8kc_          69 CGTDRNAYVWTLKG---RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI--SICYFEQENDWWVCKHIKKPIRST  143 (371)
T ss_dssp             EETTSCEEEEEEET---TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE--EEEEEETTTTEEEEEEECTTCCSC
T ss_pred             EECCCeEEEEeecc---cccccccccccccccccccccccccccceeecccCcc--eeeeeecccccccccccccccccc
Confidence            45799999999852   111123556789999999999997655    678999  888  33332111010 1223456


Q ss_pred             ceeeecCc
Q psy14121         76 LGRLGLGQ   83 (118)
Q Consensus        76 i~~l~~~~   83 (118)
                      +.|+.|..
T Consensus       144 v~~v~~~p  151 (371)
T d1k8kc_         144 VLSLDWHP  151 (371)
T ss_dssp             EEEEEECT
T ss_pred             cccccccc
Confidence            77888753

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.57  E-value=0.0018  Score=45.05  Aligned_cols=54  Identities=13%  Similarity=0.259  Sum_probs=37.2

Q ss_pred             CccccceEEEeehhhhcCCCC--cccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDN--KVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~--~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .|..||.|.+||......-..  ........|+++|.+|+|+|....    +.+|.|  .||
T Consensus       222 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i--~iw  281 (388)
T d1erja_         222 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV--KLW  281 (388)
T ss_dssp             EEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcE--EEE
Confidence            367899999999864321110  111445679999999999997665    678999  999

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.32  E-value=0.0036  Score=44.33  Aligned_cols=51  Identities=22%  Similarity=0.231  Sum_probs=38.1

Q ss_pred             ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      |.+||.|.+||....-.  .........|.+.|.+|+|+|....     +.+|.|  .||
T Consensus       178 ~~~d~~v~~~d~~~~~~--~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i--~iw  233 (325)
T d1pgua1         178 VGDDGSVVFYQGPPFKF--SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI--SCF  233 (325)
T ss_dssp             EETTTEEEEEETTTBEE--EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE--EEE
T ss_pred             eeccccccccccccccc--ceecccccCCCCccEEeeeccccceeccccccccce--eee
Confidence            56899999999643210  0112556789999999999997655     789999  999

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.14  E-value=0.018  Score=37.61  Aligned_cols=53  Identities=17%  Similarity=0.278  Sum_probs=38.9

Q ss_pred             ccccceEEEeehhhhcCCCCc----------ccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDGIIQMYNVDNIMSGDNK----------VDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG~I~lwdp~kIL~g~~~----------~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      +..+|.|.+|+.+.-......          .......|..+|.+|.|+|...-    +.||.|  .||
T Consensus       212 ~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v--~vW  278 (342)
T d1yfqa_         212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGII--SCW  278 (342)
T ss_dssp             EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCE--EEE
T ss_pred             ecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEE--EEE
Confidence            467899999987654332110          01345678889999999998877    789999  999

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.09  E-value=0.029  Score=37.86  Aligned_cols=47  Identities=17%  Similarity=0.270  Sum_probs=37.0

Q ss_pred             ccccc-eEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          3 GCDDG-IIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         3 GlenG-~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      |.++| .|.+||.+.      ..+.+...|.+.|.++.|.|....    +.++.|  ++|
T Consensus        61 ~~~~g~~v~v~d~~~------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~--~~~  112 (360)
T d1k32a3          61 GTREGDFLGIYDYRT------GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEI--MTV  112 (360)
T ss_dssp             EETTEEEEEEEETTT------CCEEECCCCCCSEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred             EcCCCCEEEEEECCC------CcEEEeeCCCceEEeeeecccccccceecccccc--ccc
Confidence            34444 789998753      234677889999999999998777    788889  999

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.99  E-value=0.044  Score=38.44  Aligned_cols=46  Identities=13%  Similarity=0.120  Sum_probs=34.5

Q ss_pred             ccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          5 DDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         5 enG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .++.+.+|+.+.   +  ..+.....|+++|.++.|.|..+.     +.++.|  .||
T Consensus       137 ~~~~~~~~~~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v--~~~  187 (325)
T d1pgua1         137 RDNFGVFISWDS---G--NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSV--VFY  187 (325)
T ss_dssp             SSCSEEEEETTT---C--CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEE--EEE
T ss_pred             ccceEEEEeecc---c--ccceeeeecccccccccccccccceEEEeeccccc--ccc
Confidence            355666776532   1  234677889999999999998877     678999  999

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=92.65  E-value=0.024  Score=38.12  Aligned_cols=51  Identities=12%  Similarity=0.214  Sum_probs=37.8

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .+-+|++|.+||.+.  .+ .-.+.+...|.|.|++|.|+|....     ..++-|  .+|
T Consensus         9 ~~~~~~~I~v~~~~~--~~-~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i--~~~   64 (333)
T d1ri6a_           9 ASPESQQIHVWNLNH--EG-ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV--LAY   64 (333)
T ss_dssp             EEGGGTEEEEEEECT--TS-CEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEE--EEE
T ss_pred             ECCCCCcEEEEEEcC--CC-CeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeE--EEE
Confidence            457899999998742  11 1123566689999999999998776     457889  788

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.42  E-value=0.071  Score=38.91  Aligned_cols=48  Identities=15%  Similarity=0.081  Sum_probs=36.2

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .+.|||.|.|||.+.   +  ..+.+...| ..|.+|.|+|....    +.++.|  .+|
T Consensus        37 ~~~~dg~v~vwD~~t---~--~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v--~vw   88 (426)
T d1hzua2          37 TLRDAGQIALVDGDS---K--KIVKVIDTG-YAVHISRMSASGRYLLVIGRDARI--DMI   88 (426)
T ss_dssp             EETTTTEEEEEETTT---C--SEEEEEECC-SSEEEEEECTTSCEEEEEETTSEE--EEE
T ss_pred             EEcCCCEEEEEECCC---C--cEEEEEeCC-CCeeEEEECCCCCEEEEEeCCCCE--EEE
Confidence            356899999999843   1  233555555 46999999998877    567899  999

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=90.71  E-value=0.076  Score=34.84  Aligned_cols=48  Identities=6%  Similarity=-0.054  Sum_probs=34.7

Q ss_pred             CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121          2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW   57 (118)
Q Consensus         2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW   57 (118)
                      .+.+||+|.+||++.-      .+.+.-++.+.+++|.|+|....     ..+++|  .+|
T Consensus         7 ~~~~~~~v~v~D~~t~------~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i--~v~   59 (301)
T d1l0qa2           7 ANSESDNISVIDVTSN------KVTATIPVGSNPMGAVISPDGTKVYVANAHSNDV--SII   59 (301)
T ss_dssp             EETTTTEEEEEETTTT------EEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEE--EEE
T ss_pred             EECCCCEEEEEECCCC------eEEEEEECCCCceEEEEeCCCCEEEEEECCCCEE--EEE
Confidence            3568999999998542      33233344456799999998775     567899  999

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=84.34  E-value=0.34  Score=31.85  Aligned_cols=45  Identities=2%  Similarity=0.046  Sum_probs=34.5

Q ss_pred             ccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          5 DDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         5 enG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      .++.|.+||++.-      .+.+.-.|.+.+.+|.|+|-...    +.+|.|  .||
T Consensus       258 ~~~~i~v~d~~~~------~~~~~~~~~~~~~~~~~s~dG~~l~v~~~~~~i--~v~  306 (337)
T d1pbyb_         258 AYNVLESFDLEKN------ASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDL--AAY  306 (337)
T ss_dssp             EESEEEEEETTTT------EEEEEEECSSCCCEEEECTTSCEEEEESBSSEE--EEE
T ss_pred             ccccEEEEECCCC------cEEEEEcCCCCEEEEEECCCCCEEEEEeCCCcE--EEE
Confidence            3678999998542      23333457788999999998877    788999  999

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=81.97  E-value=0.54  Score=35.00  Aligned_cols=46  Identities=11%  Similarity=0.116  Sum_probs=34.8

Q ss_pred             cccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          4 CDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         4 lenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      -++|.|.|||++--     +.+.+...|. .|.++.|.|....    ..+|-|  .||
T Consensus        39 ~d~g~v~v~D~~t~-----~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v--~~~   88 (432)
T d1qksa2          39 RDAGQIALIDGSTY-----EIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKV--NMI   88 (432)
T ss_dssp             TTTTEEEEEETTTC-----CEEEEEECSS-CEEEEEECTTSCEEEEEETTSEE--EEE
T ss_pred             cCCCEEEEEECCCC-----cEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCE--EEE
Confidence            47999999998421     2235666663 6999999998887    557899  999

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=81.10  E-value=0.62  Score=30.63  Aligned_cols=44  Identities=11%  Similarity=0.102  Sum_probs=32.4

Q ss_pred             cceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121          6 DGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW   57 (118)
Q Consensus         6 nG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW   57 (118)
                      ++.|.+||++.      ..+.+...+.+.|.+|.|.|....    +.+|.|  .||
T Consensus       271 ~~~v~v~d~~~------~~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v--~v~  318 (346)
T d1jmxb_         271 LNRLAKYDLKQ------RKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDL--AVF  318 (346)
T ss_dssp             ESEEEEEETTT------TEEEEEEECSSCCCEEEECSSSSCEEEESBSSEE--EEE
T ss_pred             CCeEEEEECCC------CcEEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcE--EEE
Confidence            46788888633      223334456668999999998777    789999  999