Psyllid ID: psy14226

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530--
MMAVAAAQKSREMFAIKKSYSIELLDQGLTEEEVILEKAASESKEAESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYNGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLRQTFDFLPI
ccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHccccEEEEEEEEcccccHHHHHHHHHHHccccEEEEEcccccccccEEEEEEEEEcccHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHcccEEEEEEEEEEccccEEEEcccccccHHHHHHccccccccccccHHcccccccccccccccEEEEccHHHHHHHHHHHHHHccccccccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
cHHHHHHcccHHHHHHHccccHHHccccccHHHHHHHHcccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccEEEEEEEcccccccccEEEEEEEcccHHHHHHHHHHHHHHccEEEEEEcccccccccccccccEHHHHHHHHHcEccccHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHEcHHHHHHHHHHHHHHccEccEcccHHHHHHHHHHHcccEEEEcccEccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcHHcccEEEEccccccHHHHHHHHcccEEEEcccccccccccccccccHHHHHHHcccHHHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccEEEEccEEEEccHHHHccHHHHHHHcccccEEEEccHHHHHcccccccccccEEEEEccHHHHHHHHHHHHHccccccEEEEEccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcHcccccccc
MMAVAAAQKSREMFAIKKSYSIELLDQGLTEEEVILEKAASESKEAESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRqssslgginlltennisvkgpwfpthasdldncnhlmtkyepdldmnhpgfadQVYRQRRKDIAEIAFkyngdpiphidytdseyATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAegiftperipqLEEMSNFLKKhtgftlrpaaglLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTgftlrpaagLLTARDFLASLAFRVfqstqyvrhtktpfhtvepDCIHELlghmplladpsfaqfSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHaisdkpehrvfdpistavqpyqdqeyqpiyfvAESFEDAKEKFRRWVSTmsrpyevrfnpytqrVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLRQTFDFLPI
mmavaaaqksremfAIKKSYSIELLDQGLTEEEVILEKaaseskeaesAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLEtrvskmagiqfdvlvkVDMTRRDLLNLIRSlrqssslggiNLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAfkyngdpipHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVStmsrpyevrfnpytqRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKlrqtfdflpi
MMAVAAAQKSREMFAIKKSYSIELLDQGLTEEEVILekaaseskeaesaIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYNGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILekaaseskeaesaIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLRQTFDFLPI
**************AIKKSYSIELLDQGLT***V****************QTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYNGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVIL*************IQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLRQTFDF***
***************************************************TAALVLRMREGMSSLARILKTIEVFKGTVVHL*******AGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNIS***PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYNGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLRQ*******
*********SREMFAIKKSYSIELLDQGLTEEEVILEK**********AIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYNGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILEK**********AIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLRQTFDFLPI
*******************YSIELLDQGLTEEEVILEKA*******ESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYNGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLRQTF*****
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MMAVAAAQKSREMFAIKKSYSIELLDQGLTEEEVILEKAASESKEAESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYNGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCxxxxxxxxxxxxxxxxxxxxxxxxxxxxFDFLPI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query532 2.2.26 [Sep-21-2011]
P18459579 Tyrosine 3-monooxygenase no N/A 0.840 0.772 0.667 0.0
P24529498 Tyrosine 3-monooxygenase yes N/A 0.75 0.801 0.484 1e-122
P04177498 Tyrosine 3-monooxygenase yes N/A 0.75 0.801 0.484 1e-122
Q76IQ3495 Tyrosine 3-monooxygenase yes N/A 0.798 0.858 0.461 1e-121
P17289491 Tyrosine 3-monooxygenase yes N/A 0.748 0.810 0.473 1e-120
P11982491 Tyrosine 3-monooxygenase N/A N/A 0.746 0.808 0.467 1e-118
P07101528 Tyrosine 3-monooxygenase no N/A 0.796 0.803 0.460 1e-117
O42091488 Tyrosine 3-monooxygenase N/A N/A 0.751 0.819 0.464 1e-116
P90925457 Probable phenylalanine-4- yes N/A 0.810 0.943 0.427 1e-105
P04176453 Phenylalanine-4-hydroxyla no N/A 0.778 0.913 0.426 1e-104
>sp|P18459|TY3H_DROME Tyrosine 3-monooxygenase OS=Drosophila melanogaster GN=ple PE=2 SV=2 Back     alignment and function desciption
 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/503 (66%), Positives = 390/503 (77%), Gaps = 56/503 (11%)

Query: 26  DQGLTEEEVILEKAASESKEAESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLET 85
           D GLTE+E++L  AASES +AE+A+Q+AALV+R++EG+SSL RILK IE F GTV H+E+
Sbjct: 132 DYGLTEDEILLANAASESSDAEAAMQSAALVVRLKEGISSLGRILKAIETFHGTVQHVES 191

Query: 86  RVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASD 145
           R S++ G+  DVL+K+DMTR +LL LIRSLRQS S   +NL+ +NN++VK PWFP HAS+
Sbjct: 192 RQSRVEGVDHDVLIKLDMTRGNLLQLIRSLRQSGSFSSMNLMADNNLNVKAPWFPKHASE 251

Query: 146 LDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYN-GDPIPHIDYTDSEYATW 204
           LDNCNHLMTKYEPDLDMNHPGFAD+VYRQRRK+IAEIAF Y  GDPIP IDY+D E  TW
Sbjct: 252 LDNCNHLMTKYEPDLDMNHPGFADKVYRQRRKEIAEIAFAYKYGDPIPFIDYSDVEVKTW 311

Query: 205 KAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAG 264
           ++VF TV DL PKH C EY+  F  LQ E IF   R+PQL+EMS                
Sbjct: 312 RSVFKTVQDLAPKHACAEYRAAFQKLQDEQIFVETRLPQLQEMS---------------- 355

Query: 265 LLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTAR 324
                DFL                                   ++TGF+LRPAAGLLTAR
Sbjct: 356 -----DFL----------------------------------RKNTGFSLRPAAGLLTAR 376

Query: 325 DFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLG 384
           DFLASLAFR+FQSTQYVRH  +P+HT EPD IHELLGHMPLLADPSFAQFSQEIGLASLG
Sbjct: 377 DFLASLAFRIFQSTQYVRHVNSPYHTPEPDSIHELLGHMPLLADPSFAQFSQEIGLASLG 436

Query: 385 ASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPIST 444
           ASDEEIEKLSTVYWFTVEFGLCKE+G++KAYGAGLLSSYGELLHAISDK EHR F+P ST
Sbjct: 437 ASDEEIEKLSTVYWFTVEFGLCKEHGQIKAYGAGLLSSYGELLHAISDKCEHRAFEPAST 496

Query: 445 AVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLEN 504
           AVQPYQDQEYQPIY+VAESFEDAK+KFRRWVSTMSRP+EVRFNP+T+RVEVLD VDKLE 
Sbjct: 497 AVQPYQDQEYQPIYYVAESFEDAKDKFRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLET 556

Query: 505 LMSQLNLEMLHLNTAVNKLRQTF 527
           L+ Q+N E+LHL  A++KLR+ F
Sbjct: 557 LVHQMNTEILHLTNAISKLRRPF 579
Plays an important role in the physiology of adrenergic neurons.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 6EC: .EC: 2
>sp|P24529|TY3H_MOUSE Tyrosine 3-monooxygenase OS=Mus musculus GN=Th PE=1 SV=3 Back     alignment and function description
>sp|P04177|TY3H_RAT Tyrosine 3-monooxygenase OS=Rattus norvegicus GN=Th PE=1 SV=3 Back     alignment and function description
>sp|Q76IQ3|TY3H_CANFA Tyrosine 3-monooxygenase OS=Canis familiaris GN=TH PE=2 SV=1 Back     alignment and function description
>sp|P17289|TY3H_BOVIN Tyrosine 3-monooxygenase OS=Bos taurus GN=TH PE=1 SV=5 Back     alignment and function description
>sp|P11982|TY3H_PHASP Tyrosine 3-monooxygenase OS=Phasianidae sp. GN=TH PE=3 SV=1 Back     alignment and function description
>sp|P07101|TY3H_HUMAN Tyrosine 3-monooxygenase OS=Homo sapiens GN=TH PE=1 SV=5 Back     alignment and function description
>sp|O42091|TY3H_ANGAN Tyrosine 3-monooxygenase OS=Anguilla anguilla GN=th PE=2 SV=1 Back     alignment and function description
>sp|P90925|PH4H_CAEEL Probable phenylalanine-4-hydroxylase 1 OS=Caenorhabditis elegans GN=pah-1 PE=1 SV=2 Back     alignment and function description
>sp|P04176|PH4H_RAT Phenylalanine-4-hydroxylase OS=Rattus norvegicus GN=Pah PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query532
17136774508 pale, isoform A [Drosophila melanogaster 0.887 0.929 0.637 0.0
403182453479 AAEL017098-PA [Aedes aegypti] 0.845 0.939 0.687 0.0
328711183 724 PREDICTED: tyrosine 3-monooxygenase-like 0.887 0.651 0.632 0.0
195011849574 GH15635 [Drosophila grimshawi] gi|193896 0.840 0.778 0.673 0.0
198463506575 GA10085 [Drosophila pseudoobscura pseudo 0.840 0.777 0.675 0.0
195171886575 GL13238 [Drosophila persimilis] gi|19411 0.840 0.777 0.675 0.0
195125027576 GI12682 [Drosophila mojavensis] gi|19391 0.840 0.776 0.673 0.0
170057654589 conserved hypothetical protein [Culex qu 0.934 0.843 0.674 0.0
195374750576 GJ12666 [Drosophila virilis] gi|19415332 0.840 0.776 0.669 0.0
158295182574 AGAP006023-PA [Anopheles gambiae str. PE 0.840 0.778 0.687 0.0
>gi|17136774|ref|NP_476897.1| pale, isoform A [Drosophila melanogaster] gi|433470|emb|CAA53802.1| tyrosine hydroxylase [Drosophila melanogaster] gi|595801|gb|AAA62877.1| tyrosine hydroxylase type 1, neuronal form [Drosophila melanogaster] gi|23094058|gb|AAN12080.1| pale, isoform A [Drosophila melanogaster] Back     alignment and taxonomy information
 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/563 (63%), Positives = 415/563 (73%), Gaps = 91/563 (16%)

Query: 1   MMAVAAAQKSREMFAIKKSYSIE---------LLDQ------------------------ 27
           MMAVAAAQK+REMFAIKKSYSIE         L+D                         
Sbjct: 1   MMAVAAAQKNREMFAIKKSYSIENGYPSRRRSLVDDARFETLVVKQTKQTVLEEARSKAN 60

Query: 28  --GLTEEEVILEKAASESKEAESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLET 85
             GLTE+E++L  AASES +AE+A+Q+AALV+R++EG+SSL RILK IE F GTV H+E+
Sbjct: 61  DYGLTEDEILLANAASESSDAEAAMQSAALVVRLKEGISSLGRILKAIETFHGTVQHVES 120

Query: 86  RVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASD 145
           R S++ G+  DVL+K+DMTR +LL LIRSLRQS S   +NL+ +NN++VK PWFP HAS+
Sbjct: 121 RQSRVEGVDHDVLIKLDMTRGNLLQLIRSLRQSGSFSSMNLMADNNLNVKAPWFPKHASE 180

Query: 146 LDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYN-GDPIPHIDYTDSEYATW 204
           LDNCNHLMTKYEPDLDMNHPGFAD+VYRQRRK+IAEIAF Y  GDPIP IDY+D E  TW
Sbjct: 181 LDNCNHLMTKYEPDLDMNHPGFADKVYRQRRKEIAEIAFAYKYGDPIPFIDYSDVEVKTW 240

Query: 205 KAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAG 264
           ++VF TV DL PKH C EY+  F  LQ E IF   R+PQL+EMS                
Sbjct: 241 RSVFKTVQDLAPKHACAEYRAAFQKLQDEQIFVETRLPQLQEMS---------------- 284

Query: 265 LLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTAR 324
                DFL                                   ++TGF+LRPAAGLLTAR
Sbjct: 285 -----DFL----------------------------------RKNTGFSLRPAAGLLTAR 305

Query: 325 DFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLG 384
           DFLASLAFR+FQSTQYVRH  +P+HT EPD IHELLGHMPLLADPSFAQFSQEIGLASLG
Sbjct: 306 DFLASLAFRIFQSTQYVRHVNSPYHTPEPDSIHELLGHMPLLADPSFAQFSQEIGLASLG 365

Query: 385 ASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPIST 444
           ASDEEIEKLSTVYWFTVEFGLCKE+G++KAYGAGLLSSYGELLHAISDK EHR F+P ST
Sbjct: 366 ASDEEIEKLSTVYWFTVEFGLCKEHGQIKAYGAGLLSSYGELLHAISDKCEHRAFEPAST 425

Query: 445 AVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLEN 504
           AVQPYQDQEYQPIY+VAESFEDAK+KFRRWVSTMSRP+EVRFNP+T+RVEVLD VDKLE 
Sbjct: 426 AVQPYQDQEYQPIYYVAESFEDAKDKFRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLET 485

Query: 505 LMSQLNLEMLHLNTAVNKLRQTF 527
           L+ Q+N E+LHL  A++KLR+ F
Sbjct: 486 LVHQMNTEILHLTNAISKLRRPF 508

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|403182453|gb|EJY57397.1| AAEL017098-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|328711183|ref|XP_001944964.2| PREDICTED: tyrosine 3-monooxygenase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|195011849|ref|XP_001983349.1| GH15635 [Drosophila grimshawi] gi|193896831|gb|EDV95697.1| GH15635 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|198463506|ref|XP_001352846.2| GA10085 [Drosophila pseudoobscura pseudoobscura] gi|198151286|gb|EAL30347.2| GA10085 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195171886|ref|XP_002026733.1| GL13238 [Drosophila persimilis] gi|194111667|gb|EDW33710.1| GL13238 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|195125027|ref|XP_002006984.1| GI12682 [Drosophila mojavensis] gi|193918593|gb|EDW17460.1| GI12682 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|170057654|ref|XP_001864578.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167877040|gb|EDS40423.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|195374750|ref|XP_002046166.1| GJ12666 [Drosophila virilis] gi|194153324|gb|EDW68508.1| GJ12666 [Drosophila virilis] Back     alignment and taxonomy information
>gi|158295182|ref|XP_316061.3| AGAP006023-PA [Anopheles gambiae str. PEST] gi|157015912|gb|EAA44132.3| AGAP006023-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query532
FB|FBgn0005626579 ple "pale" [Drosophila melanog 0.430 0.395 0.817 6.4e-198
MGI|MGI:98735498 Th "tyrosine hydroxylase" [Mus 0.406 0.433 0.662 2.3e-129
RGD|3853498 Th "tyrosine hydroxylase" [Rat 0.400 0.427 0.665 7.9e-129
UNIPROTKB|P07101528 TH "Tyrosine 3-monooxygenase" 0.398 0.401 0.663 2.7e-128
ZFIN|ZDB-GENE-990621-5489 th "tyrosine hydroxylase" [Dan 0.406 0.441 0.662 2.4e-127
UNIPROTKB|P17289491 TH "Tyrosine 3-monooxygenase" 0.406 0.439 0.666 3e-127
UNIPROTKB|F1PBW5495 TH "Tyrosine 3-monooxygenase" 0.398 0.428 0.663 4.9e-127
ZFIN|ZDB-GENE-050201-1475 th2 "tyrosine hydroxylase 2" [ 0.409 0.458 0.669 8e-127
UNIPROTKB|Q76IQ3495 TH "Tyrosine 3-monooxygenase" 0.398 0.428 0.663 8e-127
UNIPROTKB|F1N5V3491 TH "Tyrosine 3-monooxygenase" 0.406 0.439 0.666 1e-126
FB|FBgn0005626 ple "pale" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 991 (353.9 bits), Expect = 6.4e-198, Sum P(3) = 6.4e-198
 Identities = 188/230 (81%), Positives = 211/230 (91%)

Query:   298 IQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIH 357
             +Q  +  LR ++TGF+LRPAAGLLTARDFLASLAFR+FQSTQYVRH  +P+HT EPD IH
Sbjct:   351 LQEMSDFLR-KNTGFSLRPAAGLLTARDFLASLAFRIFQSTQYVRHVNSPYHTPEPDSIH 409

Query:   358 ELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGA 417
             ELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKE+G++KAYGA
Sbjct:   410 ELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKEHGQIKAYGA 469

Query:   418 GLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVST 477
             GLLSSYGELLHAISDK EHR F+P STAVQPYQDQEYQPIY+VAESFEDAK+KFRRWVST
Sbjct:   470 GLLSSYGELLHAISDKCEHRAFEPASTAVQPYQDQEYQPIYYVAESFEDAKDKFRRWVST 529

Query:   478 MSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLRQTF 527
             MSRP+EVRFNP+T+RVEVLD VDKLE L+ Q+N E+LHL  A++KLR+ F
Sbjct:   530 MSRPFEVRFNPHTERVEVLDSVDKLETLVHQMNTEILHLTNAISKLRRPF 579
GO:0006584 "catecholamine metabolic process" evidence=NAS
GO:0004511 "tyrosine 3-monooxygenase activity" evidence=ISS;NAS;TAS
GO:0042053 "regulation of dopamine metabolic process" evidence=NAS
GO:0007619 "courtship behavior" evidence=NAS
GO:0008344 "adult locomotory behavior" evidence=IMP
GO:0005575 "cellular_component" evidence=ND
GO:0048066 "developmental pigmentation" evidence=TAS
GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005506 "iron ion binding" evidence=IEA
GO:2000274 "regulation of epithelial cell migration, open tracheal system" evidence=IMP
GO:0009611 "response to wounding" evidence=IEP
GO:0008049 "male courtship behavior" evidence=IMP
GO:0042416 "dopamine biosynthetic process" evidence=IMP
GO:0048067 "cuticle pigmentation" evidence=IMP
GO:0042417 "dopamine metabolic process" evidence=IMP
GO:0043052 "thermotaxis" evidence=IMP
GO:0040040 "thermosensory behavior" evidence=IMP
GO:0048082 "regulation of adult chitin-containing cuticle pigmentation" evidence=IGI;IMP
GO:0035220 "wing disc development" evidence=IMP
GO:0048085 "adult chitin-containing cuticle pigmentation" evidence=IMP
MGI|MGI:98735 Th "tyrosine hydroxylase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3853 Th "tyrosine hydroxylase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P07101 TH "Tyrosine 3-monooxygenase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-990621-5 th "tyrosine hydroxylase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P17289 TH "Tyrosine 3-monooxygenase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PBW5 TH "Tyrosine 3-monooxygenase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050201-1 th2 "tyrosine hydroxylase 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q76IQ3 TH "Tyrosine 3-monooxygenase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1N5V3 TH "Tyrosine 3-monooxygenase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P04177TY3H_RAT1, ., 1, 4, ., 1, 6, ., 20.48490.750.8012yesN/A
P17289TY3H_BOVIN1, ., 1, 4, ., 1, 6, ., 20.47300.74810.8105yesN/A
P90925PH4H_CAEEL1, ., 1, 4, ., 1, 6, ., 10.42710.81010.9431yesN/A
Q76IQ3TY3H_CANFA1, ., 1, 4, ., 1, 6, ., 20.46150.79880.8585yesN/A
P24529TY3H_MOUSE1, ., 1, 4, ., 1, 6, ., 20.48490.750.8012yesN/A
Q54XS1PH4H_DICDI1, ., 1, 4, ., 1, 6, ., 40.37160.78000.9410yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.14.16.20.946
3rd Layer1.14.160.963

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query532
TIGR01269457 TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase, 0.0
cd03345298 cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase 0.0
pfam00351306 pfam00351, Biopterin_H, Biopterin-dependent aromat 0.0
TIGR01268436 TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydrox 1e-156
cd03347306 cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydr 1e-153
TIGR01270464 TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenas 1e-132
cd03346287 cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxyla 1e-116
cd00361221 cd00361, arom_aa_hydroxylase, Biopterin-dependent 1e-108
PRK11913275 PRK11913, phhA, phenylalanine 4-monooxygenase; Rev 2e-57
cd03348228 cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hy 5e-44
COG3186291 COG3186, COG3186, Phenylalanine-4-hydroxylase [Ami 7e-40
TIGR01267248 TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydrox 3e-36
cd04930115 cd04930, ACT_TH, ACT domain of the nonheme iron-de 1e-25
cd0490474 cd04904, ACT_AAAH, ACT domain of the nonheme iron- 2e-18
PRK11913275 PRK11913, phhA, phenylalanine 4-monooxygenase; Rev 1e-16
PRK14056 578 PRK14056, PRK14056, phenylalanine 4-monooxygenase; 1e-15
PRK14055362 PRK14055, PRK14055, aromatic amino acid hydroxylas 6e-14
cd03348228 cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hy 1e-11
cd0492974 cd04929, ACT_TPH, ACT domain of the nonheme iron-d 4e-06
cd0488075 cd04880, ACT_AAAH-PDT-like, ACT domain of the nonh 0.002
>gnl|CDD|130336 TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase, tetrameric Back     alignment and domain information 
 Score =  637 bits (1645), Expect = 0.0
 Identities = 257/503 (51%), Positives = 315/503 (62%), Gaps = 62/503 (12%)

Query: 26  DQGLTEEEVILEKAASESKEAESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLET 85
           D G     +I     +  +++E+A+Q     +R +E +SSL RILK IE FK  +VH ET
Sbjct: 13  DYGRIHSIIINFHPITHEQDSEAAMQNNQFYIRTKE-ISSLHRILKYIETFKLNLVHFET 71

Query: 86  R---VSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTH 142
           R       A + +  L+ ++    ++  LI SLR +S + GINLL   N  VK  WFP H
Sbjct: 72  RPTRTLSNADVDYSCLITLEANEINMSLLIESLRGNSFISGINLLNNQN--VKEDWFPKH 129

Query: 143 ASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYN-GDPIPHIDYTDSEY 201
            S+LD C HL+TK++PDLD +HPGF D+VYRQRR+ IAEIAF+Y  GDPIP ++YT  E 
Sbjct: 130 ISELDKCQHLLTKFQPDLDTDHPGFHDKVYRQRREAIAEIAFQYKYGDPIPEVEYTKEEI 189

Query: 202 ATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRP 261
            TW+ VF T+ DL   H C+EY D F +L+    +  E IPQL+ +S             
Sbjct: 190 ETWRLVFTTMKDLHASHACREYIDAFQLLEKYCNYNSESIPQLQTIS------------- 236

Query: 262 AAGLLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLL 321
                   +FL                                   + TGF LRP AGLL
Sbjct: 237 --------EFLH----------------------------------RTTGFRLRPVAGLL 254

Query: 322 TARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLA 381
           +ARDFLASLAFRVFQ TQY+RH  +P HT EPDCIHELLGHMP+LAD  FAQFSQEIGLA
Sbjct: 255 SARDFLASLAFRVFQCTQYIRHHSSPMHTPEPDCIHELLGHMPMLADRQFAQFSQEIGLA 314

Query: 382 SLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDP 441
           SLGAS+EEIEKLST+YWFTVEFGLCKENGE KAYGAGLLSSYGEL HA SD  E R F+P
Sbjct: 315 SLGASEEEIEKLSTLYWFTVEFGLCKENGETKAYGAGLLSSYGELEHAFSDLSEKRPFNP 374

Query: 442 ISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDK 501
              AVQPYQDQ YQ IYFV ESFEDAK K R +++T  RP+ VRF+P T+ VEVLD   K
Sbjct: 375 NDAAVQPYQDQGYQKIYFVTESFEDAKRKLRNYINTSGRPFIVRFDPITETVEVLDRFSK 434

Query: 502 LENLMSQLNLEMLHLNTAVNKLR 524
            + L+  +  E+  L TA+N L 
Sbjct: 435 RKELLKHVKEEIGQLTTALNHLN 457

This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria. Length = 457
>gnl|CDD|239461 cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>gnl|CDD|201173 pfam00351, Biopterin_H, Biopterin-dependent aromatic amino acid hydroxylase Back     alignment and domain information
>gnl|CDD|130335 TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydroxylase, tetrameric form Back     alignment and domain information
>gnl|CDD|239463 cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>gnl|CDD|130337 TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenase, tetrameric Back     alignment and domain information
>gnl|CDD|239462 cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH) Back     alignment and domain information
>gnl|CDD|238215 cd00361, arom_aa_hydroxylase, Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>gnl|CDD|237020 PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed Back     alignment and domain information
>gnl|CDD|239464 cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>gnl|CDD|225727 COG3186, COG3186, Phenylalanine-4-hydroxylase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|130334 TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydroxylase, monomeric form Back     alignment and domain information
>gnl|CDD|153202 cd04930, ACT_TH, ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH) Back     alignment and domain information
>gnl|CDD|153176 cd04904, ACT_AAAH, ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) Back     alignment and domain information
>gnl|CDD|237020 PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed Back     alignment and domain information
>gnl|CDD|237598 PRK14056, PRK14056, phenylalanine 4-monooxygenase; Provisional Back     alignment and domain information
>gnl|CDD|172547 PRK14055, PRK14055, aromatic amino acid hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|239464 cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>gnl|CDD|153201 cd04929, ACT_TPH, ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes Back     alignment and domain information
>gnl|CDD|153152 cd04880, ACT_AAAH-PDT-like, ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 532
KOG3820|consensus461 100.0
TIGR01268436 Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetra 100.0
TIGR01270464 Trp_5_monoox tryptophan 5-monooxygenase, tetrameri 100.0
TIGR01269457 Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric. 100.0
PF00351332 Biopterin_H: Biopterin-dependent aromatic amino ac 100.0
cd03347306 eu_PheOH Eukaryotic phenylalanine-4-hydroxylase (e 100.0
cd03345298 eu_TyrOH Eukaryotic tyrosine hydroxylase (TyrOH); 100.0
cd03346287 eu_TrpOH Eukaryotic tryptophan hydroxylase (TrpOH) 100.0
PRK11913275 phhA phenylalanine 4-monooxygenase; Reviewed 100.0
cd03348228 pro_PheOH Prokaryotic phenylalanine-4-hydroxylase 100.0
cd00361221 arom_aa_hydroxylase Biopterin-dependent aromatic a 100.0
TIGR01267248 Phe4hydrox_mono phenylalanine-4-hydroxylase, monom 100.0
PRK14056 578 phenylalanine 4-monooxygenase; Provisional 100.0
PRK14055362 aromatic amino acid hydroxylase; Provisional 100.0
COG3186291 Phenylalanine-4-hydroxylase [Amino acid transport 100.0
cd0490474 ACT_AAAH ACT domain of the nonheme iron-dependent, 99.82
COG0077279 PheA Prephenate dehydratase [Amino acid transport 99.78
cd0493190 ACT_PAH ACT domain of the nonheme iron-dependent a 99.78
cd04930115 ACT_TH ACT domain of the nonheme iron-dependent ar 99.78
cd0492974 ACT_TPH ACT domain of the nonheme iron-dependent a 99.78
PRK11899279 prephenate dehydratase; Provisional 99.77
PRK11898283 prephenate dehydratase; Provisional 99.72
PRK10622386 pheA bifunctional chorismate mutase/prephenate deh 99.72
cd0488075 ACT_AAAH-PDT-like ACT domain of the nonheme iron-d 99.71
PLN02317382 arogenate dehydratase 99.7
cd0490580 ACT_CM-PDT C-terminal ACT domain of the bifunction 99.65
KOG2797|consensus377 99.05
PRK08818370 prephenate dehydrogenase; Provisional 98.38
PF0184266 ACT: ACT domain; InterPro: IPR002912 The ACT domai 98.12
cd0488673 ACT_ThrD-II-like C-terminal ACT domain of biodegra 98.06
cd0488876 ACT_PheB-BS C-terminal ACT domain of a small (~147 97.56
cd0488265 ACT_Bt0572_2 C-terminal ACT domain of a novel prot 97.29
cd0487472 ACT_Af1403 N-terminal ACT domain of the yet unchar 97.22
PRK04435147 hypothetical protein; Provisional 97.15
cd0488472 ACT_CBS C-terminal ACT domain of the cystathionine 97.14
cd0211660 ACT ACT domains are commonly involved in specifica 97.09
cd0487872 ACT_AHAS N-terminal ACT domain of the Escherichia 97.06
cd0488372 ACT_AcuB C-terminal ACT domain of the Bacillus sub 97.0
PF1329180 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A. 96.94
cd0490969 ACT_PDH-BS C-terminal ACT domain of the monofuncti 96.74
PRK0673776 acetolactate synthase 1 regulatory subunit; Valida 96.73
cd0487971 ACT_3PGDH-like ACT_3PGDH-like CD includes the C-te 96.7
cd0490371 ACT_LSD C-terminal ACT domain of the L-serine dehy 96.64
cd0490273 ACT_3PGDH-xct C-terminal ACT (regulatory) domain o 96.58
cd0488568 ACT_ThrD-I Tandem C-terminal ACT domains of threon 96.58
cd0490169 ACT_3PGDH C-terminal ACT (regulatory) domain of D- 96.53
cd0488774 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-te 96.5
PRK11895161 ilvH acetolactate synthase 3 regulatory subunit; R 96.31
PF1371063 ACT_5: ACT domain; PDB: 2FGC_A 2PC6_A 2F1F_B. 96.3
COG4492150 PheB ACT domain-containing protein [General functi 96.28
cd0490866 ACT_Bt0572_1 N-terminal ACT domain of a novel prot 96.28
cd0488179 ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-termin 96.25
cd0490685 ACT_ThrD-I_1 First of two tandem C-terminal ACT do 96.2
TIGR00119157 acolac_sm acetolactate synthase, small subunit. ac 96.1
PRK08577136 hypothetical protein; Provisional 96.0
cd0487774 ACT_TyrR N-terminal ACT domain of the TyrR protein 95.94
PRK1115276 ilvM acetolactate synthase 2 regulatory subunit; P 95.75
cd0487671 ACT_RelA-SpoT ACT domain found C-terminal of the R 95.69
CHL00100174 ilvH acetohydroxyacid synthase small subunit 95.51
PRK08198404 threonine dehydratase; Provisional 95.0
TIGR01127380 ilvA_1Cterm threonine dehydratase, medium form. A 94.84
PRK1356284 acetolactate synthase 1 regulatory subunit; Provis 94.76
cd0487370 ACT_UUR-ACR-like ACT domains of the bacterial sign 94.73
cd0488956 ACT_PDH-BS-like C-terminal ACT domain of the monof 94.54
PRK06382406 threonine dehydratase; Provisional 94.38
PRK0817896 acetolactate synthase 1 regulatory subunit; Review 94.04
PRK0019490 hypothetical protein; Validated 93.58
cd0489970 ACT_ACR-UUR-like_2 C-terminal ACT domains of the b 92.76
cd0489675 ACT_ACR-like_3 ACT domain-containing protein which 92.73
PRK07334403 threonine dehydratase; Provisional 92.49
cd0493575 ACT_AKiii-DAPDC_1 ACT domains of a bifunctional AK 92.45
cd0492672 ACT_ACR_4 C-terminal ACT domain, of a novel type o 92.38
cd0486981 ACT_GcvR_2 ACT domains that comprise the Glycine C 92.17
TIGR02079409 THD1 threonine dehydratase. This model represents 91.95
PRK08526403 threonine dehydratase; Provisional 91.89
COG4747142 ACT domain-containing protein [General function pr 91.35
cd0487288 ACT_1ZPV ACT domain proteins similar to the yet un 91.27
PRK08639420 threonine dehydratase; Validated 90.97
cd0487574 ACT_F4HF-DF N-terminal ACT domain of formyltetrahy 90.32
cd0493473 ACT_AK-Hom3_1 CT domains located C-terminal to the 89.9
PF1374076 ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A. 89.2
COG2061170 ACT-domain-containing protein, predicted allosteri 88.91
PRK09224504 threonine dehydratase; Reviewed 88.87
cd0489062 ACT_AK-like_1 ACT domains found C-terminal to the 88.56
COG0317701 SpoT Guanosine polyphosphate pyrophosphohydrolases 87.58
cd0493275 ACT_AKiii-LysC-EC_1 ACT domains located C-terminal 87.52
cd0490781 ACT_ThrD-I_2 Second of two tandem C-terminal ACT d 87.36
cd0491275 ACT_AKiii-LysC-EC-like_1 ACT domains located C-ter 87.2
cd0487075 ACT_PSP_1 CT domains found N-terminal of phosphose 87.02
cd0489161 ACT_AK-LysC-DapG-like_1 ACT domains of the lysine- 86.91
PRK11092702 bifunctional (p)ppGpp synthetase II/ guanosine-3', 86.62
PRK12483521 threonine dehydratase; Reviewed 86.59
cd0491176 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal 86.47
TIGR00691683 spoT_relA (p)ppGpp synthetase, RelA/SpoT family. ( 85.42
cd0491375 ACT_AKii-LysC-BS-like_1 ACT domains of the lysine- 84.98
cd0493378 ACT_AK1-AT_1 ACT domains located C-terminal to the 84.91
PLN02550591 threonine dehydratase 84.89
TIGR01124499 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, 83.33
PRK10872743 relA (p)ppGpp synthetase I/GTP pyrophosphokinase; 82.26
cd0489775 ACT_ACR_3 ACT domain-containing protein which is c 81.62
>KOG3820|consensus Back     alignment and domain information 
Probab=100.00  E-value=6.4e-166  Score=1266.67  Aligned_cols=424  Identities=57%  Similarity=0.952  Sum_probs=406.6

Q ss_pred             ccCCeEEEEEEeCCCccHHHHHHHHHHHCCcceeeeecccCCCCCceEEEEEEEecCcHHHHHHHHHHHhhcC-CccEEE
Q psy14226         48 SAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSS-LGGINL  126 (532)
Q Consensus        48 sg~dKTSLIFsL~dkpGALaeILkvFa~~gINLThIESRPSk~~~~eY~FFVD~Eg~d~~V~eaLe~Lk~~~~-~~~VkV  126 (532)
                      .+...++++|++++++|+|+++|++|+.++|||.||||||++....+|++||+|++...++.++++.|++.+. ...+.+
T Consensus        32 ~~~~~~~~if~~r~~~~~l~~~Lk~f~~~~vnl~HiEsR~s~~~~~~~evlv~~~~~~~~l~~~i~~lrq~~~~~~~~s~  111 (461)
T KOG3820|consen   32 EEGARISLIFSLRNKVGALARALKAFEEFHVNLLHIESRPSERRSSGYEVLVELDATRGQLIQAIELLRQNHVALSYFSS  111 (461)
T ss_pred             cccceEEEEEEecccchHHHHHHHHhhhcCceEEEeecccccccCCCceEEEeeccchhhHHHHHHHHHHhcccceeccc
Confidence            3455789999999999999999999999999999999999998888899999999988899999999998752 112333


Q ss_pred             ecccC---ccCCCCCCCCccchhhhhhhhhhccCCCCCCCCCCCCChHHHHHHHHHHHHhhhcC-CCCCCCccCCHHHHH
Q psy14226        127 LTENN---ISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYN-GDPIPHIDYTDSEYA  202 (532)
Q Consensus       127 LGs~n---~~e~vPWFPRkIsDLD~ca~~vL~yg~eld~dHPGFsD~~YreRRawIA~Ia~~~~-g~~ip~~~YT~~e~~  202 (532)
                      ...+.   ...++|||||+|+|||+|+|+|||||++||.|||||+|++||+||++||+||++|| |||||+|+||+||++
T Consensus       112 ~~~~~~~~~~~~vpWFPr~IsdLD~can~vl~Yg~eLDadHPGFkD~vYR~RRk~fadiA~nyKhGdpIP~veYT~eEik  191 (461)
T KOG3820|consen  112 FNRDLKDNKNTSVPWFPRKISDLDQCANRVLKYGPELDADHPGFKDPVYRQRRKFFADIAFNYKHGDPIPRVEYTEEEIK  191 (461)
T ss_pred             chhhhhhccCCCCCccccchhHHHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcccCCCCCccccCHHHHH
Confidence            33322   23589999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHHHHHHHHhhccchhhHHHHHHHHHHHhcCCCCCCCCCChHHhhHHHHhccCceEeecCccchhhhhhhccCchhHHH
Q psy14226        203 TWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEV  282 (532)
Q Consensus       203 ~W~~v~~~~~~~~~~~Ac~~y~~~~~~L~~~~~~~~d~IPql~~vs~~L~~~tG~~~~pv~~~~~~~~f~~~~~~~~~~~  282 (532)
                      ||++||++|.+|+++|||+||+++|++|+++|||++||||||+|||+|||++|||+|||||                   
T Consensus       192 TWg~Vf~~L~~Ly~~HAC~ey~~~f~lLe~~cg~~ednIPQLeDVs~FLk~~TGF~lRPvA-------------------  252 (461)
T KOG3820|consen  192 TWGTVFRTLTDLYPTHACAEYLDNFPLLEKYCGYREDNIPQLEDVSKFLKKKTGFRLRPVA-------------------  252 (461)
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCcCCCCcchHHHHHHHHHhccCceeeccc-------------------
Confidence            9999999999999999999999999999999999999999999999999999999999999                   


Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHHHhhcccccccccCCCCChHHHHHHhhcccccccccccCCCCCCCCCCchhhHhhhCC
Q psy14226        283 ILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGH  362 (532)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tgf~~~p~~Gll~~~~Fl~~la~r~F~~tqyiR~~~~~~ytpePD~~He~~GH  362 (532)
                                                          ||||+||||++||||||||||||||+++|+|||||||||||+||
T Consensus       253 ------------------------------------GlLSaRDFLagLAFRVFhcTQYiRH~s~P~yTPEPD~cHELLGH  296 (461)
T KOG3820|consen  253 ------------------------------------GLLSARDFLAGLAFRVFHCTQYIRHHSSPFYTPEPDTCHELLGH  296 (461)
T ss_pred             ------------------------------------ccCcHHHHHhhhhhhheeeeeeeecCCCCCCCCCCchHHHHhcc
Confidence                                                99999999999999999999999999999999999999999999


Q ss_pred             CCCCCChhHHHHHHHHhhhhcCCCHHHHHHHhhhheeeeEeeeeecCCceeEeccccccchhhhhhhcCCCCccccCCcc
Q psy14226        363 MPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPI  442 (532)
Q Consensus       363 ~P~l~~p~fA~f~q~~G~~~l~a~~~~~~~l~~~yWfTvEfGL~~e~g~~kayGAGlLSS~gE~~~~ls~~~~~~~fd~~  442 (532)
                      ||||+||+||||||+||+||||||||+|+||+||||||||||||+|+|++||||||||||+|||+|||||+|++++|||+
T Consensus       297 vPLfADp~FAQFSQEIGLASLGAsDe~IEKLaTlywFtVEFGLCkq~g~~KayGAGLLSS~gEL~hals~~pei~~FdP~  376 (461)
T KOG3820|consen  297 VPLFADPSFAQFSQEIGLASLGASDEDIEKLATLYWFTVEFGLCKQDGELKAYGAGLLSSYGELQHALSDKPEIKDFDPE  376 (461)
T ss_pred             chhccChhHHHHhHHhhhhhcCCCHHHHHHhheeeEEEEEEeeeccCCeeeeechhhhhhHHHHHHHhcCCccccCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCccceeeeCCHHHHHHHHHHHHHhcCCCceeeecCCcceEEEecChHHHHHHHHHHHHHHHHHHHHHHH
Q psy14226        443 STAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNK  522 (532)
Q Consensus       443 ~~~~~~y~i~~~Q~~yFv~~sfe~~~~~~~~~~~~~~rp~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  522 (532)
                      .+++|+|.||+|||.|||+|||+|+|+|||+|++||+|||+|||||||+||||||++++|++++++|++|+++|++||.|
T Consensus       377 vt~vq~y~it~yQp~YfvaeSFedAk~KlR~fa~ti~RPF~VrynpyT~svEvLds~~~l~~~~~~l~~dl~~l~~Al~k  456 (461)
T KOG3820|consen  377 VTAVQKYLITTYQPLYFVAESFEDAKEKLRKFASTIKRPFSVRYNPYTQSVEVLDSSAKLERLVSSLRSDLSILTHALSK  456 (461)
T ss_pred             ceeeeeccccccccceeehhhHHHHHHHHHHHHHhCCCCceeeeccccceehhhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhh
Q psy14226        523 LRQT  526 (532)
Q Consensus       523 ~~~~  526 (532)
                      |+..
T Consensus       457 i~~~  460 (461)
T KOG3820|consen  457 IKRS  460 (461)
T ss_pred             hccC
Confidence            9864

>TIGR01268 Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetrameric form Back     alignment and domain information
>TIGR01270 Trp_5_monoox tryptophan 5-monooxygenase, tetrameric Back     alignment and domain information
>TIGR01269 Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric Back     alignment and domain information
>PF00351 Biopterin_H: Biopterin-dependent aromatic amino acid hydroxylase; InterPro: IPR019774 Phenylalanine, tyrosine and tryptophan hydroxylases constitute a family of tetrahydrobiopterin-dependent aromatic amino acid hydroxylases, all of which are rate-limiting catalysts for important metabolic pathways [] Back     alignment and domain information
>cd03347 eu_PheOH Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>cd03345 eu_TyrOH Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>cd03346 eu_TrpOH Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH) Back     alignment and domain information
>PRK11913 phhA phenylalanine 4-monooxygenase; Reviewed Back     alignment and domain information
>cd03348 pro_PheOH Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>cd00361 arom_aa_hydroxylase Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH) Back     alignment and domain information
>TIGR01267 Phe4hydrox_mono phenylalanine-4-hydroxylase, monomeric form Back     alignment and domain information
>PRK14056 phenylalanine 4-monooxygenase; Provisional Back     alignment and domain information
>PRK14055 aromatic amino acid hydroxylase; Provisional Back     alignment and domain information
>COG3186 Phenylalanine-4-hydroxylase [Amino acid transport and metabolism] Back     alignment and domain information
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) Back     alignment and domain information
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism] Back     alignment and domain information
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH) Back     alignment and domain information
>cd04930 ACT_TH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH) Back     alignment and domain information
>cd04929 ACT_TPH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes Back     alignment and domain information
>PRK11899 prephenate dehydratase; Provisional Back     alignment and domain information
>PRK11898 prephenate dehydratase; Provisional Back     alignment and domain information
>PRK10622 pheA bifunctional chorismate mutase/prephenate dehydratase; Provisional Back     alignment and domain information
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) Back     alignment and domain information
>PLN02317 arogenate dehydratase Back     alignment and domain information
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme Back     alignment and domain information
>KOG2797|consensus Back     alignment and domain information
>PRK08818 prephenate dehydrogenase; Provisional Back     alignment and domain information
>PF01842 ACT: ACT domain; InterPro: IPR002912 The ACT domain is found in a variety of contexts and is proposed to be a conserved regulatory binding fold Back     alignment and domain information
>cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains Back     alignment and domain information
>cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a Back     alignment and domain information
>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains Back     alignment and domain information
>cd04874 ACT_Af1403 N-terminal ACT domain of the yet uncharacterized, small (~133 a Back     alignment and domain information
>PRK04435 hypothetical protein; Provisional Back     alignment and domain information
>cd04884 ACT_CBS C-terminal ACT domain of the cystathionine beta-synthase (CBS) domain protein found in Thermotoga maritima, Tm0935, and delta proteobacteria Back     alignment and domain information
>cd02116 ACT ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme Back     alignment and domain information
>cd04878 ACT_AHAS N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS) Back     alignment and domain information
>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB Back     alignment and domain information
>PF13291 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A Back     alignment and domain information
>cd04909 ACT_PDH-BS C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) Back     alignment and domain information
>PRK06737 acetolactate synthase 1 regulatory subunit; Validated Back     alignment and domain information
>cd04879 ACT_3PGDH-like ACT_3PGDH-like CD includes the C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH) Back     alignment and domain information
>cd04903 ACT_LSD C-terminal ACT domain of the L-serine dehydratase (LSD), iron-sulfur-dependent, beta subunit Back     alignment and domain information
>cd04902 ACT_3PGDH-xct C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH) Back     alignment and domain information
>cd04885 ACT_ThrD-I Tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) Back     alignment and domain information
>cd04901 ACT_3PGDH C-terminal ACT (regulatory) domain of D-3-Phosphoglycerate Dehydrogenase (3PGDH) found in fungi and bacteria Back     alignment and domain information
>cd04887 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI and related domains Back     alignment and domain information
>PRK11895 ilvH acetolactate synthase 3 regulatory subunit; Reviewed Back     alignment and domain information
>PF13710 ACT_5: ACT domain; PDB: 2FGC_A 2PC6_A 2F1F_B Back     alignment and domain information
>COG4492 PheB ACT domain-containing protein [General function prediction only] Back     alignment and domain information
>cd04908 ACT_Bt0572_1 N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains Back     alignment and domain information
>cd04881 ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-terminal ACT domain of the NAD(P)H-dependent, homoserine dehydrogenase (HSDH) and related domains Back     alignment and domain information
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) Back     alignment and domain information
>TIGR00119 acolac_sm acetolactate synthase, small subunit Back     alignment and domain information
>PRK08577 hypothetical protein; Provisional Back     alignment and domain information
>cd04877 ACT_TyrR N-terminal ACT domain of the TyrR protein Back     alignment and domain information
>PRK11152 ilvM acetolactate synthase 2 regulatory subunit; Provisional Back     alignment and domain information
>cd04876 ACT_RelA-SpoT ACT domain found C-terminal of the RelA/SpoT domains Back     alignment and domain information
>CHL00100 ilvH acetohydroxyacid synthase small subunit Back     alignment and domain information
>PRK08198 threonine dehydratase; Provisional Back     alignment and domain information
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form Back     alignment and domain information
>PRK13562 acetolactate synthase 1 regulatory subunit; Provisional Back     alignment and domain information
>cd04873 ACT_UUR-ACR-like ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD Back     alignment and domain information
>cd04889 ACT_PDH-BS-like C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) enzyme that catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate Back     alignment and domain information
>PRK06382 threonine dehydratase; Provisional Back     alignment and domain information
>PRK08178 acetolactate synthase 1 regulatory subunit; Reviewed Back     alignment and domain information
>PRK00194 hypothetical protein; Validated Back     alignment and domain information
>cd04899 ACT_ACR-UUR-like_2 C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains Back     alignment and domain information
>cd04896 ACT_ACR-like_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>PRK07334 threonine dehydratase; Provisional Back     alignment and domain information
>cd04935 ACT_AKiii-DAPDC_1 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein Back     alignment and domain information
>cd04926 ACT_ACR_4 C-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information
>cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains Back     alignment and domain information
>TIGR02079 THD1 threonine dehydratase Back     alignment and domain information
>PRK08526 threonine dehydratase; Provisional Back     alignment and domain information
>COG4747 ACT domain-containing protein [General function prediction only] Back     alignment and domain information
>cd04872 ACT_1ZPV ACT domain proteins similar to the yet uncharacterized Streptococcus pneumoniae ACT domain protein Back     alignment and domain information
>PRK08639 threonine dehydratase; Validated Back     alignment and domain information
>cd04875 ACT_F4HF-DF N-terminal ACT domain of formyltetrahydrofolate deformylase (F4HF-DF; formyltetrahydrofolate hydrolase) Back     alignment and domain information
>cd04934 ACT_AK-Hom3_1 CT domains located C-terminal to the catalytic domain of the aspartokinase (AK) HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae, and other related ACT domains Back     alignment and domain information
>PF13740 ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A Back     alignment and domain information
>COG2061 ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09224 threonine dehydratase; Reviewed Back     alignment and domain information
>cd04890 ACT_AK-like_1 ACT domains found C-terminal to the catalytic domain of aspartokinase (AK; 4-L-aspartate-4-phosphotransferase) Back     alignment and domain information
>COG0317 SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>cd04932 ACT_AKiii-LysC-EC_1 ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII Back     alignment and domain information
>cd04907 ACT_ThrD-I_2 Second of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) Back     alignment and domain information
>cd04912 ACT_AKiii-LysC-EC-like_1 ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII Back     alignment and domain information
>cd04870 ACT_PSP_1 CT domains found N-terminal of phosphoserine phosphatase (PSP, SerB) Back     alignment and domain information
>cd04891 ACT_AK-LysC-DapG-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII and related proteins Back     alignment and domain information
>PRK11092 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; Provisional Back     alignment and domain information
>PRK12483 threonine dehydratase; Reviewed Back     alignment and domain information
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII Back     alignment and domain information
>TIGR00691 spoT_relA (p)ppGpp synthetase, RelA/SpoT family Back     alignment and domain information
>cd04913 ACT_AKii-LysC-BS-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related proteins Back     alignment and domain information
>cd04933 ACT_AK1-AT_1 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1) Back     alignment and domain information
>PLN02550 threonine dehydratase Back     alignment and domain information
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form Back     alignment and domain information
>PRK10872 relA (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional Back     alignment and domain information
>cd04897 ACT_ACR_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query532
1toh_A343 Tyrosine Hydroxylase Catalytic And Tetramerization 1e-115
2toh_A343 Tyrosine Hydroxylase Catalytic And Tetramerization 1e-114
2xsn_A343 Crystal Structure Of Human Tyrosine Hydroxylase Cat 1e-109
1phz_A429 Structure Of Phosphorylated Phenylalanine Hydroxyla 1e-102
2pah_A335 Tetrameric Human Phenylalanine Hydroxylase Length = 7e-97
4anp_A324 Crystal Structure Of Human Phenylalanine Hydroxylas 2e-93
1j8t_A325 Catalytic Domain Of Human Phenylalanine Hydroxylase 2e-93
1dmw_A307 Crystal Structure Of Double Truncated Human Phenyla 1e-92
1pah_A308 Human Phenylalanine Hydroxylase Dimer, Residues 117 1e-92
1tdw_A308 Crystal Structure Of Double Truncated Human Phenyla 4e-92
3e2t_A314 The Catalytic Domain Of Chicken Tryptophan Hydroxyl 2e-89
1mlw_A301 Crystal Structure Of Human Tryptophan Hydroxylase W 7e-83
3hf6_A290 Crystal Structure Of Human Tryptophan Hydroxylase T 2e-79
2v28_A267 Apo Structure Of The Cold Active Phenylalanine Hydr 2e-22
2v27_A275 Structure Of The Cold Active Phenylalanine Hydroxyl 2e-22
3tk2_A302 Crystallographic Structure Of Phenylalanine Hydroxy 8e-20
1ltu_A297 Crystal Structure Of Chromobacterium Violaceum, Apo 1e-19
3tcy_A302 Crystallographic Structure Of Phenylalanine Hydroxy 2e-19
>pdb|1TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains From Rat Length = 343 Back     alignment and structure 
Iteration: 1

 Score =  412 bits (1058), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/390 (52%), Positives = 261/390 (66%), Gaps = 56/390 (14%)
Query: 135 KGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPH 193
           K PWFP   S+LD C+HL+TK++PDLD++HPGF+DQVYRQRRK IAEIAF+Y +G+PIPH
Sbjct: 8   KVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPH 67
Query: 194 IDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKK 253
           ++YT  E ATWK V+ T+  L   H C+E+ + F +                     L++
Sbjct: 68  VEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQL---------------------LER 106
Query: 254 HTGFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFT 313
           + G+       L     FL  +                                  TGF 
Sbjct: 107 YCGYREDSIPQLEDVSRFLKER----------------------------------TGFQ 132
Query: 314 LRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQ 373
           LRP AGLL+ARDFLASLAFRVFQ TQY+RH  +P H+ EPDC HELLGH+P+LAD +FAQ
Sbjct: 133 LRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQ 192
Query: 374 FSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDK 433
           FSQ+IGLASLGASDEEIEKLSTVYWFTVEFGLCK+NGE+KAYGAGLLSSYGELLH++S++
Sbjct: 193 FSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAGLLSSYGELLHSLSEE 252
Query: 434 PEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRV 493
           PE R FDP + AVQPYQDQ YQP+YFV+ESF DAK+K R + S + RP+ V+F+PYT  +
Sbjct: 253 PEVRAFDPDTAAVQPYQDQTYQPVYFVSESFNDAKDKLRNYASRIQRPFSVKFDPYTLAI 312
Query: 494 EVLDCVDKLENLMSQLNLEMLHLNTAVNKL 523
           +VLD    ++  +  +  E+  L  A++ +
Sbjct: 313 DVLDSPHTIQRSLEGVQDELHTLAHALSAI 342
>pdb|2TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains From Rat Length = 343 Back     alignment and structure
>pdb|2XSN|A Chain A, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic Domain Length = 343 Back     alignment and structure
>pdb|1PHZ|A Chain A, Structure Of Phosphorylated Phenylalanine Hydroxylase Length = 429 Back     alignment and structure
>pdb|2PAH|A Chain A, Tetrameric Human Phenylalanine Hydroxylase Length = 335 Back     alignment and structure
>pdb|4ANP|A Chain A, Crystal Structure Of Human Phenylalanine Hydroxylase In Complex With A Pharmacological Chaperone Length = 324 Back     alignment and structure
>pdb|1J8T|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase Fe(Ii) Length = 325 Back     alignment and structure
>pdb|1DMW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine Hydroxylase With Bound 7,8-Dihydro-L-Biopterin Length = 307 Back     alignment and structure
>pdb|1PAH|A Chain A, Human Phenylalanine Hydroxylase Dimer, Residues 117-424 Length = 308 Back     alignment and structure
>pdb|1TDW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine Hydroxylase Bh4-Responsive Pku Mutant A313t. Length = 308 Back     alignment and structure
>pdb|3E2T|A Chain A, The Catalytic Domain Of Chicken Tryptophan Hydroxylase 1 With Bound Tryptophan Length = 314 Back     alignment and structure
>pdb|1MLW|A Chain A, Crystal Structure Of Human Tryptophan Hydroxylase With Bound 7,8-Dihydro-L-Biopterin Cofactor And Fe(Iii) Length = 301 Back     alignment and structure
>pdb|3HF6|A Chain A, Crystal Structure Of Human Tryptophan Hydroxylase Type 1 With Bound Lp-521834 And Fe Length = 290 Back     alignment and structure
>pdb|2V28|A Chain A, Apo Structure Of The Cold Active Phenylalanine Hydroxylase From Colwellia Psychrerythraea 34h Length = 267 Back     alignment and structure
>pdb|2V27|A Chain A, Structure Of The Cold Active Phenylalanine Hydroxylase From Colwellia Psychrerythraea 34h Length = 275 Back     alignment and structure
>pdb|3TK2|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase From Chromobacterium Violaceum Cocrystallized With Phenylalanine In A Site Distal To The Active Site Length = 302 Back     alignment and structure
>pdb|1LTU|A Chain A, Crystal Structure Of Chromobacterium Violaceum, Apo (No Iron Bound) Structure Length = 297 Back     alignment and structure
>pdb|3TCY|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase From Chromobacterium Violaceum (Cpah) Bound To Phenylalanine In A Site Distal To The Active Site Length = 302 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query532
1phz_A429 Protein (phenylalanine hydroxylase); aromatic amin 1e-140
1toh_A343 Tyroh, tyrosine hydroxylase; neurotransmitter bios 1e-133
1j8u_A325 Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1 1e-129
1mlw_A301 Tryptophan 5-monooxygenase; aromatic amino acid hy 1e-109
1ltz_A297 Phenylalanine-4-hydroxylase; oxidoreductase, dihyd 2e-91
2v27_A275 Phenylalanine hydroxylase; cold adaptation, tetrah 3e-78
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A Length = 429 Back     alignment and structure
 Score =  411 bits (1057), Expect = e-140
 Identities = 191/462 (41%), Positives = 263/462 (56%), Gaps = 56/462 (12%)

Query: 41  SESKEAESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVK 100
           S  ++  +     +L+  ++E + +LA++L+  E     + H+E+R S++   +++    
Sbjct: 23  SYIEDNSNQNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTY 82

Query: 101 VDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDL 160
           +D   + +L  I    ++     ++ L+ +      PWFP    +LD   + +  Y  +L
Sbjct: 83  LDKRTKPVLGSIIKSLRNDIGATVHELSRDKEKNTVPWFPRTIQELDRFANQILSYGAEL 142

Query: 161 DMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHF 219
           D +HPGF D VYR RRK  A+IA+ Y +G PIP ++YT+ E  TW  VF T+  L   H 
Sbjct: 143 DADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYTEEEKQTWGTVFRTLKALYKTHA 202

Query: 220 CQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTE 279
           C E+  +F +L+    F  + IPQLE++S                      FL       
Sbjct: 203 CYEHNHIFPLLEKYCGFREDNIPQLEDVS---------------------QFL------- 234

Query: 280 EEVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQ 339
                                         TGF LRP AGLL++RDFL  LAFRVF  TQ
Sbjct: 235 ---------------------------QTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQ 267

Query: 340 YVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWF 399
           Y+RH   P +T EPD  HELLGH+PL +D SFAQFSQEIGLASLGA DE IEKL+T+YWF
Sbjct: 268 YIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWF 327

Query: 400 TVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYF 459
           TVEFGLCKE   +KAYGAGLLSS+GEL + +SDKP+    +   TA Q Y   E+QP+Y+
Sbjct: 328 TVEFGLCKEGDSIKAYGAGLLSSFGELQYCLSDKPKLLPLELEKTACQEYSVTEFQPLYY 387

Query: 460 VAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDK 501
           VAESF DAKEK R + +T+ RP+ VR++PYTQRVEVLD   +
Sbjct: 388 VAESFSDAKEKVRTFAATIPRPFSVRYDPYTQRVEVLDNTQQ 429
>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, P substrate; 2.30A {Rattus norvegicus} SCOP: d.178.1.1 PDB: 2toh_A* 2xsn_A Length = 343 Back     alignment and structure
>1j8u_A Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1-carboxylate facial triad, tetrahydrobiopterin, oxidoreductase; HET: H4B; 1.50A {Homo sapiens} SCOP: d.178.1.1 PDB: 1j8t_A* 1kw0_A* 1lrm_A* 1mmk_A* 1mmt_A* 4anp_A* 2pah_A 1pah_A 3pah_A* 4pah_A* 5pah_A* 6pah_A* 1tdw_A 1tg2_A* 1dmw_A* Length = 325 Back     alignment and structure
>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} SCOP: d.178.1.1 PDB: 3hf6_A* 3hf8_A* 3hfb_A* 3e2t_A* Length = 301 Back     alignment and structure
>1ltz_A Phenylalanine-4-hydroxylase; oxidoreductase, dihydrobiopterin, bacterial enzyme; HET: HBI; 1.40A {Chromobacterium violaceum} SCOP: d.178.1.1 PDB: 1ltv_A 1ltu_A* Length = 297 Back     alignment and structure
>2v27_A Phenylalanine hydroxylase; cold adaptation, tetrahydrobiopterin, stability, flexibility, alkaptonuria, oxidoreductase; 1.50A {Colwellia psychrerythraea 34H} PDB: 2v28_A Length = 275 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query532
1phz_A429 Protein (phenylalanine hydroxylase); aromatic amin 100.0
1toh_A343 Tyroh, tyrosine hydroxylase; neurotransmitter bios 100.0
1j8u_A325 Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1 100.0
1mlw_A301 Tryptophan 5-monooxygenase; aromatic amino acid hy 100.0
2v27_A275 Phenylalanine hydroxylase; cold adaptation, tetrah 100.0
3tk2_A302 Phenylalanine-4-hydroxylase; protein-substate comp 100.0
3mwb_A313 Prephenate dehydratase; L-Phe, PSI, MCSG, structur 99.88
2qmx_A283 Prephenate dehydratase; APC86053, L-Phe inhibition 99.79
3luy_A329 Probable chorismate mutase; structural genomics, A 99.77
2qmw_A267 PDT, prephenate dehydratase; APC85812, prephenate 99.75
2ko1_A88 CTR148A, GTP pyrophosphokinase; homodimer, alpha+b 97.11
1zpv_A91 ACT domain protein; structural genomics, PSI, prot 96.54
2f1f_A164 Acetolactate synthase isozyme III small subunit; f 95.95
2pc6_A165 Probable acetolactate synthase isozyme III (small; 95.55
1y7p_A223 Hypothetical protein AF1403; structural genomics, 94.99
2fgc_A193 Acetolactate synthase, small subunit; regulatory s 94.75
2f06_A144 Conserved hypothetical protein; structural genomic 92.88
2jhe_A190 Transcription regulator TYRR; aromatic hydrocarbon 91.82
2f06_A144 Conserved hypothetical protein; structural genomic 82.62
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A Back     alignment and structure
Probab=100.00  E-value=2.8e-152  Score=1189.66  Aligned_cols=399  Identities=48%  Similarity=0.852  Sum_probs=381.9

Q ss_pred             cccccCCeEEEEEEeCCCccHHHHHHHHHHHCCcceeeeecccCCCCCceEEEEEEEecC--cHHHHHHHHHHHhh-cCC
Q psy14226         45 EAESAIQTAALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMT--RRDLLNLIRSLRQS-SSL  121 (532)
Q Consensus        45 e~~sg~dKTSLIFsL~dkpGALaeILkvFa~~gINLThIESRPSk~~~~eY~FFVD~Eg~--d~~V~eaLe~Lk~~-~~~  121 (532)
                      +..++.+||||+|+++|+||+|+++|++|+.+|||||||||||++++.|+|.|||||+ +  ++.++++|++|++. +  
T Consensus        27 e~~tg~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e-h~~d~~v~~AL~eL~~~~~--  103 (429)
T 1phz_A           27 DNSNQNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD-KRTKPVLGSIIKSLRNDIG--  103 (429)
T ss_dssp             CCCCSSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC-GGGHHHHHHHHHHHHHTTC--
T ss_pred             CCCCCCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe-eCCCHHHHHHHHHHHhhcc--
Confidence            3346778999999999999999999999999999999999999999999999999999 7  46699999999998 8  


Q ss_pred             ccEEEecccCccCCCCCCCCccchhhhhhhhhhccCCCCCCCCCCCCChHHHHHHHHHHHHhhhcC-CCCCCCccCCHHH
Q psy14226        122 GGINLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYN-GDPIPHIDYTDSE  200 (532)
Q Consensus       122 ~~VkVLGs~n~~e~vPWFPRkIsDLD~ca~~vL~yg~eld~dHPGFsD~~YreRRawIA~Ia~~~~-g~~ip~~~YT~~e  200 (532)
                      ..+++||+++..+++|||||||+|||+|+|+||+||++||.|||||+|++||+||+|||+||++|+ |+|||+++||++|
T Consensus       104 ~~vkiLGs~~~~~~vPWFPR~IsDLDkc~~~vl~yg~~l~~dhpGf~D~~Yr~RR~~ia~ia~~~~~g~~~~~v~Yt~~e  183 (429)
T 1phz_A          104 ATVHELSRDKEKNTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYTEEE  183 (429)
T ss_dssp             CCEEEEETTCCTTCEECCCSBGGGGGTTTTCCC------CTTSTTTTCHHHHHHHHHHHHHHHTCCTTSCCCCCCCCHHH
T ss_pred             ceEEECCCcCccccCCCCCccccchhhhhhhheeccccccccCCCCCCHHHHHHHHHHHHHHHhCcCCCCCCcccCCHHH
Confidence            489999986556679999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHHHHHHHHHhcCCCCCCCCCChHHhhHHHHhccCceEeecCccchhhhhhhccCchhH
Q psy14226        201 YATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEE  280 (532)
Q Consensus       201 ~~~W~~v~~~~~~~~~~~Ac~~y~~~~~~L~~~~~~~~d~IPql~~vs~~L~~~tG~~~~pv~~~~~~~~f~~~~~~~~~  280 (532)
                      |+||++||++|++++|+|||++|++|+++|+++|||++|+||||+|||++|+++|||+++||+                 
T Consensus       184 ~~~W~~l~~~~~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~~vs~~L~~~TGw~~~pV~-----------------  246 (429)
T 1phz_A          184 KQTWGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPVA-----------------  246 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHBCHHHHHHHHHHHHHSCCBTTBCCCHHHHHHHHHHHHSCEEEECS-----------------
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCccCCCCHHHHHHHHHhccCCEEEecc-----------------
Confidence            999999999999999999999999999999999999999999999999999999999999999                 


Q ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHhhcccccccccCCCCChHHHHHHhhcccccccccccCCCCCCCCCCchhhHhhh
Q psy14226        281 EVILEKAASESKEAESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELL  360 (532)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tgf~~~p~~Gll~~~~Fl~~la~r~F~~tqyiR~~~~~~ytpePD~~He~~  360 (532)
                                                            ||||+++||++||+|||||||||||+++|+||||||||||++
T Consensus       247 --------------------------------------gli~~~~F~~~LA~r~F~~t~~iR~~~~~~YtpEPDi~He~~  288 (429)
T 1phz_A          247 --------------------------------------GLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELL  288 (429)
T ss_dssp             --------------------------------------SCCCHHHHHHHHTTTEEEECCCCCCTTCTTCCSSCCHHHHHH
T ss_pred             --------------------------------------ccCCHHHHHHHHhccccceeeeecCccccccCCCcchhHHHh
Confidence                                                  999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHhhhhcCCCHHHHHHHhhhheeeeEeeeeecCCceeEeccccccchhhhhhhcCCCCccccCC
Q psy14226        361 GHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFD  440 (532)
Q Consensus       361 GH~P~l~~p~fA~f~q~~G~~~l~a~~~~~~~l~~~yWfTvEfGL~~e~g~~kayGAGlLSS~gE~~~~ls~~~~~~~fd  440 (532)
                      ||||||+||.||+|+|+||++|+||+++++++|+||||||||||||+++|++||||||||||+||+.||||++|+++|||
T Consensus       289 GH~PlL~~p~fA~f~q~~G~~~l~a~~~~i~~LarlyWfTVEFGLi~~~~~lk~YGAGlLSS~gE~~~~ls~~p~~~pfd  368 (429)
T 1phz_A          289 GHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKEGDSIKAYGAGLLSSFGELQYCLSDKPKLLPLE  368 (429)
T ss_dssp             HTHHHHTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTTTCEEEETTEEEECCHHHHTCHHHHHHHTSSSSEEEECC
T ss_pred             cccccccCHHHHHHHHHHHHHhcCCCHHHHHHHhhhheeeeeeceeccCCceeeeccccccChhHHHHhcCCCCeeccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCccceeeeCCHHHHHHHHHHHHHhcCCCceeeecCCcceEEEecChHH
Q psy14226        441 PISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDK  501 (532)
Q Consensus       441 ~~~~~~~~y~i~~~Q~~yFv~~sfe~~~~~~~~~~~~~~rp~~~~~~~~t~~~~~~~~~~~  501 (532)
                      |+.+++|+|+|++|||+|||++||++|++++++|+++|+|||.|+||||||+|||||++++
T Consensus       369 ~~~~~~~~y~i~~~Qp~yFv~~sf~~l~~~~~~f~~~~~~pf~~~y~~~t~~~~~~~~~~~  429 (429)
T 1phz_A          369 LEKTACQEYSVTEFQPLYYVAESFSDAKEKVRTFAATIPRPFSVRYDPYTQRVEVLDNTQQ  429 (429)
T ss_dssp             HHHHTTCCCCSSSSCSEEEEESCHHHHHHHHHHHHTTSCCSSEEEEETTTTEEEEECCC--
T ss_pred             HHHHcCCCCCCCCcccceEEeCCHHHHHHHHHHHHHhCCCCcceeeCCCccEEEecCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999864
>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, P substrate; 2.30A {Rattus norvegicus} SCOP: d.178.1.1 PDB: 2toh_A* 2xsn_A Back     alignment and structure
>1j8u_A Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1-carboxylate facial triad, tetrahydrobiopterin, oxidoreductase; HET: H4B; 1.50A {Homo sapiens} SCOP: d.178.1.1 PDB: 1j8t_A* 1kw0_A* 1lrm_A* 1mmk_A* 1mmt_A* 4anp_A* 2pah_A 1pah_A 3pah_A* 4pah_A* 5pah_A* 6pah_A* 1tdw_A 1tg2_A* 1dmw_A* Back     alignment and structure
>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} SCOP: d.178.1.1 PDB: 3hf6_A* 3hf8_A* 3hfb_A* 3e2t_A* Back     alignment and structure
>2v27_A Phenylalanine hydroxylase; cold adaptation, tetrahydrobiopterin, stability, flexibility, alkaptonuria, oxidoreductase; 1.50A {Colwellia psychrerythraea 34H} PDB: 2v28_A Back     alignment and structure
>3tk2_A Phenylalanine-4-hydroxylase; protein-substate complex, mixed alpha, beta, tetrahydrobiopterin, iron (II), molecular OX hydroxylation; HET: PHE; 1.35A {Chromobacterium violaceum} PDB: 3tk4_A 3tcy_A* 1ltz_A* 1ltv_A 1ltu_A* Back     alignment and structure
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens} Back     alignment and structure
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls} Back     alignment and structure
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis} Back     alignment and structure
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3 Back     alignment and structure
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A Back     alignment and structure
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7 Back     alignment and structure
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6 Back     alignment and structure
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6 Back     alignment and structure
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12 Back     alignment and structure
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6 Back     alignment and structure
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11 Back     alignment and structure
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli} Back     alignment and structure
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 532
d1toha_336 d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus n 1e-156
d1j8ua_307 d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Hum 1e-151
d1mlwa_290 d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo 1e-135
d1ltza_277 d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chr 5e-84
>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 336 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tyrosine hydroxylase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  446 bits (1150), Expect = e-156
 Identities = 205/390 (52%), Positives = 263/390 (67%), Gaps = 56/390 (14%)

Query: 135 KGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPH 193
           K PWFP   S+LD C+HL+TK++PDLD++HPGF+DQVYRQRRK IAEIAF+Y +G+PIPH
Sbjct: 1   KVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPH 60

Query: 194 IDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKK 253
           ++YT  E ATWK V+ T+  L   H C+E+ + F +L+    +  + IPQLE++S FLK+
Sbjct: 61  VEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKE 120

Query: 254 HTGFTLRPAAGLLTARDFLANQGLTEEEVILEKAASESKEAESAIQTAALVLRMQHTGFT 313
            TGF LRP AGLL+ARDFLA                                        
Sbjct: 121 RTGFQLRPVAGLLSARDFLA---------------------------------------- 140

Query: 314 LRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQ 373
                  L  R F         Q TQY+RH  +P H+ EPDC HELLGH+P+LAD +FAQ
Sbjct: 141 ------SLAFRVF---------QCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQ 185

Query: 374 FSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDK 433
           FSQ+IGLASLGASDEEIEKLSTVYWFTVEFGLCK+NGE+KAYGAGLLSSYGELLH++S++
Sbjct: 186 FSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAGLLSSYGELLHSLSEE 245

Query: 434 PEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRV 493
           PE R FDP + AVQPYQDQ YQP+YFV+ESF DAK+K R + S + RP+ V+F+PYT  +
Sbjct: 246 PEVRAFDPDTAAVQPYQDQTYQPVYFVSESFNDAKDKLRNYASRIQRPFSVKFDPYTLAI 305

Query: 494 EVLDCVDKLENLMSQLNLEMLHLNTAVNKL 523
           +VLD    ++  +  +  E+  L  A++ +
Sbjct: 306 DVLDSPHTIQRSLEGVQDELHTLAHALSAI 335
>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]} Length = 307 Back     information, alignment and structure
>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]} Length = 290 Back     information, alignment and structure
>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chromobacterium violaceum [TaxId: 536]} Length = 277 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query532
d1toha_336 Tyrosine hydroxylase {Rat (Rattus norvegicus) [Tax 100.0
d1j8ua_307 Phenylalanine hydroxylase, PAH {Human (Homo sapien 100.0
d1mlwa_290 Tryptophan hydroxylase {Human (Homo sapiens) [TaxI 100.0
d1ltza_277 Phenylalanine hydroxylase, PAH {Chromobacterium vi 100.0
d1phza197 Phenylalanine hydroxylase N-terminal domain {Rat ( 99.85
d2qmwa280 Prephenate dehydratase C-terminal domain {Staphylo 99.83
d1y7pa277 Hypothetical protein AF1403, N-terminal domain {Ar 97.4
d2f1fa176 Acetolactate synthase small subunit, IlvH {Escheri 97.0
d1sc6a384 Phosphoglycerate dehydrogenase, regulatory (C-term 96.66
d2fgca278 Acetolactate synthase small subunit, IlvH {Thermot 96.25
d2pc6a277 Acetolactate synthase small subunit, IlvH {Nitroso 96.14
d2f06a171 Hypothetical protein BT0572 {Bacteroides thetaiota 95.56
d1ygya378 Phosphoglycerate dehydrogenase, regulatory (C-term 95.37
d2f06a270 Hypothetical protein BT0572 {Bacteroides thetaiota 94.01
d1zpva183 UPF0237 protein SP0238 {Streptococcus pneumoniae [ 92.12
d1u8sa186 putative transcriptional repressor VC2159 {Vibrio 91.39
d1u8sa293 putative transcriptional repressor VC2159 {Vibrio 89.56
>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tyrosine hydroxylase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-139  Score=1057.74  Aligned_cols=335  Identities=62%  Similarity=1.102  Sum_probs=322.0

Q ss_pred             CCCCCCCccchhhhhhhhhhccCCCCCCCCCCCCChHHHHHHHHHHHHhhhcC-CCCCCCccCCHHHHHHHHHHHHHHHh
Q psy14226        135 KGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKYN-GDPIPHIDYTDSEYATWKAVFNTVLD  213 (532)
Q Consensus       135 ~vPWFPRkIsDLD~ca~~vL~yg~eld~dHPGFsD~~YreRRawIA~Ia~~~~-g~~ip~~~YT~~e~~~W~~v~~~~~~  213 (532)
                      +||||||+|+|||+|+|+||+||++||+|||||+|++||+||++||++|++|+ |+|||+|+||++||+||++||++|++
T Consensus         1 ~vpwfp~~i~dld~~~~~~~~~~~~l~~dhpgf~D~~Yr~RR~~~a~~a~~~~~g~piP~v~YT~eE~~tW~~l~~rl~~   80 (336)
T d1toha_           1 KVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHVEYTAEEIATWKEVYVTLKG   80 (336)
T ss_dssp             CCCCCCSBGGGGGGC-----------CTTSTTTTCHHHHHHHHHHHHHHHHCCTTSCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHhchhhccCcccCCCCCCCCCHHHHHHHHHHHHHHHhccCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999 99999999999999999999999999


Q ss_pred             hccchhhHHHHHHHHHHHhcCCCCCCCCCChHHhhHHHHhccCceEeecCccchhhhhhhccCchhHHHHHHHhhhhhHH
Q psy14226        214 LMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILEKAASESKE  293 (532)
Q Consensus       214 ~~~~~Ac~~y~~~~~~L~~~~~~~~d~IPql~~vs~~L~~~tG~~~~pv~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  293 (532)
                      ++++|||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+                              
T Consensus        81 l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~dvs~~L~~~TGw~l~pV~------------------------------  130 (336)
T d1toha_          81 LYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKERTGFQLRPVA------------------------------  130 (336)
T ss_dssp             HHHHHBCHHHHHHHHHHHHHSCCBTTBCCCHHHHHHHHHHHTSCEEEECS------------------------------
T ss_pred             HHhccccHHHHHHHHHHHHhcCCCcCCCCCHHHHHHHHHHhhCCEEEecC------------------------------
Confidence            99999999999999999999999999999999999999999999999999                              


Q ss_pred             HHHHHHHHHHHHHhhcccccccccCCCCChHHHHHHhhcccccccccccCCCCCCCCCCchhhHhhhCCCCCCCChhHHH
Q psy14226        294 AESAIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQ  373 (532)
Q Consensus       294 ~~~~~~~~~~~~~~~~tgf~~~p~~Gll~~~~Fl~~la~r~F~~tqyiR~~~~~~ytpePD~~He~~GH~P~l~~p~fA~  373 (532)
                                               ||||+++||++||+|||||||||||+++|+||||||||||++||||||+||+|||
T Consensus       131 -------------------------Gli~~r~F~~~LA~RvFp~TqyIR~~~~~~YtpEPDi~HEl~GHvPlLadp~fA~  185 (336)
T d1toha_         131 -------------------------GLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQ  185 (336)
T ss_dssp             -------------------------SCCCHHHHHHHHTTTEEEECCCCCCTTCTTCCSSCCHHHHHHHTHHHHTSHHHHH
T ss_pred             -------------------------CcCCHHHHHHHHhcCccceeeeeccccccccccchhHHHHHhCcccccCCHHHHH
Confidence                                     9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhcCCCHHHHHHHhhhheeeeEeeeeecCCceeEeccccccchhhhhhhcCCCCccccCCccccccccccCCC
Q psy14226        374 FSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQE  453 (532)
Q Consensus       374 f~q~~G~~~l~a~~~~~~~l~~~yWfTvEfGL~~e~g~~kayGAGlLSS~gE~~~~ls~~~~~~~fd~~~~~~~~y~i~~  453 (532)
                      |+|+||++|++|+++++++|+||||||||||||+++|++||||||||||+||+.||||++|+++||||+.+++|+|+|++
T Consensus       186 f~q~~G~~sl~a~de~i~~LarlYWfTVEFGLi~e~g~lKaYGAGLLSS~gEl~~als~~~~~~pfd~~~v~~t~y~i~~  265 (336)
T d1toha_         186 FSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAGLLSSYGELLHSLSEEPEVRAFDPDTAAVQPYQDQT  265 (336)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHTTTTTCEEEETTEEEECCHHHHTCHHHHHHHTSSSSEEEECCHHHHHTCCCCSSS
T ss_pred             HHHHHHHHHhhcchHHHHHHhhhheeeEeeeeeccCCCceEecccccCCHHHHHHHccCCCcccCCCHHHHhcCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccceeeeCCHHHHHHHHHHHHHhcCCCceeeecCCcceEEEecChHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14226        454 YQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEVLDCVDKLENLMSQLNLEMLHLNTAVNKLR  524 (532)
Q Consensus       454 ~Q~~yFv~~sfe~~~~~~~~~~~~~~rp~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  524 (532)
                      |||+|||++|||||+++||+|+++|+|||.||||||||+|||||+.++|++++++|++||.+|++||+||+
T Consensus       266 ~Qp~YFV~~Sfe~l~e~l~~fa~~~~rpf~~~y~p~t~~vevl~~~~~~~~~~~~~~~~~~~~~~a~~~~~  336 (336)
T d1toha_         266 YQPVYFVSESFNDAKDKLRNYASRIQRPFSVKFDPYTLAIDVLDSPHTIQRSLEGVQDELHTLAHALSAIS  336 (336)
T ss_dssp             CCSEEEEESCHHHHHHHHHHHHHTSCCSCEEEEETTTTEEEEECSHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cccceEEECCHHHHHHHHHHHHHhcCCCcccccCCccceEEeeCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999985
>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure