Psyllid ID: psy14254

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Protein Sequence
MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAEKAKR
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccEEEccccccccccccHHHHHHHHHHHHHHHHHccccccHHHccccccccccccHHHHHHHHHHHcccccccccccHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAGEVLVDalpyidqgyddpgVREAALAMVEEETrryrptknylehippldinkFETEIMRKDFERIqqrlpmeplsmiryklpqpptgkmsdiAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAEKAKR
Flexible Loop (DISEMBL)
MAGEVlvdalpyidqgyddpGVREAALAMVEEetrryrptknylehippldinKFETEIMRKDFERIqqrlpmeplsMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAEKAKR
Low Complexity Region (SEG)
MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAEKAKR
Disordered region (IsUnstruct)
****VLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQ*********MIRY***********DIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQIL*******
Disordered Region (DISOPRED)
**GEVLVDALPYIDQGYDDPGVREAALA***********************INKFE**I****************************************CVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKV**********KLEADWVGLVSKNYEIEQACVLLEK************
Disordered Region (DISEMBL)
MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAEKAKR
Disordered Region (DISPRO)
**GEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAE****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCxxxxxxxxxxxxxxxxxxxxxRKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAEKAKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	210	2.2.26 [Sep-21-2011]
Q9D287	225	Pre-mRNA-splicing factor	yes	N/A	0.952	0.888	0.59	5e-62
O75934	225	Pre-mRNA-splicing factor	yes	N/A	0.952	0.888	0.59	5e-62
Q5RAX7	226	Pre-mRNA-splicing factor	yes	N/A	0.952	0.884	0.597	7e-62
Q5RKQ0	225	Pre-mRNA-splicing factor	yes	N/A	0.952	0.888	0.585	1e-61
Q6PBE2	223	Pre-mRNA-splicing factor	yes	N/A	0.952	0.896	0.58	2e-60
Q949S9	253	Pre-mRNA-splicing factor	yes	N/A	0.995	0.826	0.330	3e-25
Q54SG7	226	Pre-mRNA-splicing factor	yes	N/A	0.938	0.871	0.310	6e-19

>sp|Q9D287|SPF27_MOUSE Pre-mRNA-splicing factor SPF27 OS=Mus musculus GN=Bcas2 PE=2 SV=1

 Score =  237 bits (604), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 118/200 (59%), Positives = 155/200 (77%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct: 7   VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct: 67  RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E++WV
Sbjct: 127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWV 186

Query: 181 GLVSKNYEIEQACVLLEKKI 200
            LVSKNYEIE+  V LE +I
Sbjct: 187 SLVSKNYEIERTIVQLENEI 206

Involved in mRNA splicing.
Mus musculus (taxid: 10090)

>sp|O75934|SPF27_HUMAN Pre-mRNA-splicing factor SPF27 OS=Homo sapiens GN=BCAS2 PE=1 SV=1

 Score =  237 bits (604), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 118/200 (59%), Positives = 155/200 (77%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct: 7   VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct: 67  RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E++WV
Sbjct: 127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWV 186

Query: 181 GLVSKNYEIEQACVLLEKKI 200
            LVSKNYEIE+  V LE +I
Sbjct: 187 SLVSKNYEIERTIVQLENEI 206

Involved in mRNA splicing.

Homo sapiens (taxid: 9606)

>sp|Q5RAX7|SPF27_PONAB Pre-mRNA-splicing factor SPF27 OS=Pongo abelii GN=BCAS2 PE=2 SV=1

 Score =  236 bits (603), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 120/201 (59%), Positives = 156/201 (77%), Gaps = 1/201 (0%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct: 7   VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTG-KMSDIAAWTECVENSMSQLEHQSTRIVNLQ 119
           R +FER+  R P+E LSM RY+LP PP+G K +DI AW ECV NSM+QLEHQ+ RI NL+
Sbjct: 67  RNEFERLAARQPIELLSMKRYELPAPPSGQKKNDITAWQECVNNSMAQLEHQAVRIENLE 126

Query: 120 LMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADW 179
           LM ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E++W
Sbjct: 127 LMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNW 186

Query: 180 VGLVSKNYEIEQACVLLEKKI 200
           V LVSKNYEIE+  V LE +I
Sbjct: 187 VSLVSKNYEIERTIVQLENEI 207

Involved in mRNA splicing.

Pongo abelii (taxid: 9601)

>sp|Q5RKQ0|SPF27_DANRE Pre-mRNA-splicing factor SPF27 OS=Danio rerio GN=bcas2 PE=2 SV=1

 Score =  235 bits (600), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 117/200 (58%), Positives = 151/200 (75%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           +AG+V VDALPY DQGYD  GVREAA A+VEEETRRYRPTKNYL ++P  D + FETEIM
Sbjct: 7   VAGDVFVDALPYFDQGYDATGVREAAAALVEEETRRYRPTKNYLSYLPTPDFSAFETEIM 66

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           R +FER+  R PME LSM RY+LP P +G+ +D+ AW +CV NSM+QLEHQ+ RI NL+L
Sbjct: 67  RNEFERLAARQPMELLSMKRYELPAPSSGQKNDMTAWQDCVNNSMAQLEHQAVRIENLEL 126

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M +YG   WK     L   +  +Q +L  +RKEIQ++NW+RK  Q+ GG +L++LE++WV
Sbjct: 127 MAQYGTNAWKMSNDNLALMIENSQKELQNVRKEIQDLNWQRKNDQLAGGAKLRELESNWV 186

Query: 181 GLVSKNYEIEQACVLLEKKI 200
            LVSKNYEIE+A V LE ++
Sbjct: 187 SLVSKNYEIERAIVQLENEV 206

Involved in mRNA splicing.

Danio rerio (taxid: 7955)

>sp|Q6PBE2|SPF27_XENTR Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis GN=bcas2 PE=2 SV=1

 Score =  231 bits (590), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 116/200 (58%), Positives = 154/200 (77%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           +AG+V+VDALPY DQGYD  GVREAA A+VEEETRRYRPTKNYL ++P  D + FETEIM
Sbjct: 7   VAGDVVVDALPYFDQGYDAQGVREAAAALVEEETRRYRPTKNYLSYLPTPDYSAFETEIM 66

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct: 67  RNEFERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M ++G   WK Y + L++ +  AQ  L +LRK+IQ++NW+RK  Q+  G +L+++E+ WV
Sbjct: 127 MSQHGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMESTWV 186

Query: 181 GLVSKNYEIEQACVLLEKKI 200
            LVSKNYEIE+A V +E ++
Sbjct: 187 SLVSKNYEIERAIVQMENEV 206

Involved in mRNA splicing.

Xenopus tropicalis (taxid: 8364)

>sp|Q949S9|SPF27_ARATH Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1

 Score =  115 bits (287), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 116/212 (54%), Gaps = 3/212 (1%)

Query: 2   AGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRY-RPTKNYLEHIPPLDINKFET-EI 59
           A   ++DALPYID  Y +P ++     +VEEE RR  +   ++L+ +PPL    F+   +
Sbjct: 25  ANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSKKPADFLKDLPPLPKFDFKNCPV 84

Query: 60  MRKDFERIQQRLPMEPLSM-IRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNL 118
           + K++ER++   P   +    RYKL  PP  K +D AAW + ++ +   L+ +   + NL
Sbjct: 85  LGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAAWKQYLQKNQRSLQQKLIELENL 144

Query: 119 QLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEAD 178
           +LM + GPE W++    L   +++ Q    +  +EI+++N ERK  Q     +L  L  +
Sbjct: 145 ELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEKVNRERKYHQQTTSYELNALSQE 204

Query: 179 WVGLVSKNYEIEQACVLLEKKIQILQAEKAKR 210
           W  L  KN EI+ AC +LE +I   + E A+R
Sbjct: 205 WRQLCVKNMEIQSACAMLETQIDSFKKEAAER 236

Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Involved in mRNA splicing.

Arabidopsis thaliana (taxid: 3702)

>sp|Q54SG7|SPF27_DICDI Pre-mRNA-splicing factor spf27 OS=Dictyostelium discoideum GN=spf27 PE=3 SV=2

 Score = 94.0 bits (232), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 115/206 (55%), Gaps = 9/206 (4%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPP-LDINKFETEI 59
           + G   +D+LPY+D   ++   +E    ++ +E   + P  +YL  +P  +DI+    + 
Sbjct: 5   IEGAENIDSLPYVDDSVNE-NEQELINKLISDEMSTFTPP-DYLAQLPSFIDIDYNNFQF 62

Query: 60  MRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMS----DIAAWTECVENSMSQLEHQSTRI 115
           +  DF+R+++   M+   + RYK+   PT  M     +   W + + N+ SQLEHQ  R 
Sbjct: 63  LENDFKRMEKEEKMKEFDIGRYKVE--PTTTMIKQQLNEKQWNDSLNNARSQLEHQDIRK 120

Query: 116 VNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKL 175
           +NL+L+  YG  +WK YL  L       + +L Q +++I+EIN +RK+ Q +  E++++ 
Sbjct: 121 INLELLQRYGGNSWKLYLSDLEILQKTLKKQLDQKKQQIEEINIQRKLSQEQTFEKIQQH 180

Query: 176 EADWVGLVSKNYEIEQACVLLEKKIQ 201
           +  ++ LV KN EIE AC  +E +I+
Sbjct: 181 DKKFLELVYKNTEIESACKSIELEIE 206

Involved in mRNA splicing.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
383858573	248	PREDICTED: pre-mRNA-splicing factor SPF2	0.957	0.810	0.741	2e-84
340725547	247	PREDICTED: pre-mRNA-splicing factor SPF2	0.957	0.813	0.736	2e-83
380024677	249	PREDICTED: pre-mRNA-splicing factor SPF2	0.957	0.807	0.731	9e-83
48098489	251	PREDICTED: pre-mRNA-splicing factor SPF2	0.957	0.800	0.731	1e-82
307182752	244	Pre-mRNA-splicing factor SPF27 [Camponot	0.957	0.823	0.711	3e-81
346470625	262	hypothetical protein [Amblyomma maculatu	0.980	0.786	0.669	4e-81
193718415	214	PREDICTED: pre-mRNA-splicing factor SPF2	0.957	0.939	0.661	1e-80
427787399	263	Putative spliceosome-associated coiled-c	0.980	0.783	0.669	3e-80
239791247	214	ACYPI009748 [Acyrthosiphon pisum]	0.957	0.939	0.656	6e-80
307193499	250	Pre-mRNA-splicing factor SPF27 [Harpegna	0.952	0.8	0.706	1e-79

>gi|383858573|ref|XP_003704775.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Megachile rotundata]

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 149/201 (74%), Positives = 175/201 (87%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PGVREAALAMVEEETRRYRPTKNYLEH+PPL+I  FET++M
Sbjct: 1   MAGEVIVDALPYIDQGYDEPGVREAALAMVEEETRRYRPTKNYLEHLPPLNITAFETDVM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           + +FER+Q RLPME LSM RY+LP PP GKM+D+AAW E VENS +QLEHQ+TRI NL+L
Sbjct: 61  KHEFERMQNRLPMEVLSMKRYELPPPPPGKMNDLAAWNESVENSSAQLEHQATRICNLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M+EYG E WK YL+ LV  VSQAQ +L  LRK+IQE+NW+RK MQ +GGE+L+ LEA WV
Sbjct: 121 MMEYGCEAWKSYLEILVQLVSQAQKQLQALRKKIQEVNWQRKSMQTQGGEKLRALEAQWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQ 201
           GLVSKNYEIEQACV LE++IQ
Sbjct: 181 GLVSKNYEIEQACVHLEEEIQ 201

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725547|ref|XP_003401130.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Bombus terrestris] gi|350415273|ref|XP_003490588.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Bombus impatiens]

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 148/201 (73%), Positives = 173/201 (86%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PGVREAALAMVEEETRRYRPTKNYLEH+P L+I  FETE+M
Sbjct: 1   MAGEVIVDALPYIDQGYDEPGVREAALAMVEEETRRYRPTKNYLEHLPSLNITAFETEVM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           + +FER+Q RLPME LSM RY+LP PP GKM+D+AAW E V+NS +QLEHQ+TRI NL+L
Sbjct: 61  KHEFERMQNRLPMEVLSMKRYELPPPPPGKMNDLAAWNESVKNSSAQLEHQATRICNLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M+EYG E WK YL+ LV  VSQAQ +L  LRK IQE+NW+RK MQ +GGE+L+ LEA WV
Sbjct: 121 MMEYGCEAWKSYLEVLVQLVSQAQKQLQALRKRIQEVNWQRKSMQTQGGEKLRALEAQWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQ 201
           GLVSKNYEIEQACV LE++IQ
Sbjct: 181 GLVSKNYEIEQACVHLEEEIQ 201

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024677|ref|XP_003696119.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Apis florea]

 Score =  311 bits (798), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 147/201 (73%), Positives = 173/201 (86%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PGVREAALAMVEEETRRYRPTKNYLEH+  L+I  FETE+M
Sbjct: 1   MAGEVVVDALPYIDQGYDEPGVREAALAMVEEETRRYRPTKNYLEHLASLNITAFETEVM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           + +FER+Q RLPME LSM RY+LP PP GKM+D+AAW E VENS +QLEHQ+TRI NL+L
Sbjct: 61  KHEFERMQNRLPMEVLSMKRYELPPPPPGKMNDLAAWNESVENSSAQLEHQATRICNLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M+EYG E WK YL+ LV  V+QAQ +L  LRK+IQE+NW+RK MQ +GGE+L+ LEA WV
Sbjct: 121 MMEYGCEAWKSYLEILVQLVNQAQKQLQALRKKIQEVNWQRKSMQTQGGEKLRALEAQWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQ 201
           GLVSKNYEIEQACV LE++IQ
Sbjct: 181 GLVSKNYEIEQACVHLEEEIQ 201

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48098489|ref|XP_392072.1| PREDICTED: pre-mRNA-splicing factor SPF27 [Apis mellifera]

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 147/201 (73%), Positives = 173/201 (86%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PGVREAALAMVEEETRRYRPTKNYLEH+  L+I  FETE+M
Sbjct: 1   MAGEVVVDALPYIDQGYDEPGVREAALAMVEEETRRYRPTKNYLEHLTSLNITAFETEVM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           + +FER+Q RLPME LSM RY+LP PP GKM+D+AAW E VENS +QLEHQ+TRI NL+L
Sbjct: 61  KHEFERMQNRLPMEVLSMKRYELPPPPPGKMNDLAAWNESVENSSAQLEHQATRICNLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M+EYG E WK YL+ LV  V+QAQ +L  LRK+IQE+NW+RK MQ +GGE+L+ LEA WV
Sbjct: 121 MMEYGCEAWKSYLEILVQLVNQAQKQLQALRKKIQEVNWQRKSMQTQGGEKLRALEAQWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQ 201
           GLVSKNYEIEQACV LE++IQ
Sbjct: 181 GLVSKNYEIEQACVHLEEEIQ 201

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307182752|gb|EFN69876.1| Pre-mRNA-splicing factor SPF27 [Camponotus floridanus]

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/201 (71%), Positives = 172/201 (85%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PGVREAALAMV+EETRRYRPTKNYLEH+ PL+I  FETE+M
Sbjct: 1   MAGEVIVDALPYIDQGYDEPGVREAALAMVDEETRRYRPTKNYLEHLQPLNITAFETEVM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           + +FER+Q RLPME LSM RY+LP PP+GK++D+AAW E V+NS +QLEHQ+TRI NL+L
Sbjct: 61  KHEFERMQNRLPMEVLSMKRYELPPPPSGKLNDLAAWNESVQNSSAQLEHQATRICNLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M++YG E WK YL+ LV  V Q Q +L  LRK IQEINW+RK MQ +GG++L+ LEA WV
Sbjct: 121 MMDYGCEAWKSYLEVLVQLVGQGQKQLQVLRKMIQEINWQRKSMQTQGGDKLRALEAQWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQ 201
           GLVSKNYEIEQACV LE++IQ
Sbjct: 181 GLVSKNYEIEQACVHLEEEIQ 201

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346470625|gb|AEO35157.1| hypothetical protein [Amblyomma maculatum]

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 138/206 (66%), Positives = 171/206 (83%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEVLVDALPYIDQGYD+PG+REA +AMVEEETRRYRPTKNYLEH+P L +++FE+EIM
Sbjct: 1   MAGEVLVDALPYIDQGYDEPGIREAVMAMVEEETRRYRPTKNYLEHLPQLSLHQFESEIM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           + +FER+Q RLPME +SM RY+LPQPP GK +D+A+W+ECV+NS +QLEHQ+TRI NL+L
Sbjct: 61  KTEFERLQSRLPMEMMSMKRYELPQPPAGKTTDVASWSECVDNSSAQLEHQATRIANLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M  YG E WK Y   LV  + Q Q +L  LRKEIQE+NW+RK  Q + GE+LK LEA WV
Sbjct: 121 MARYGAEAWKAYNAALVRMLHQLQRQLQDLRKEIQEVNWQRKTTQTEAGEKLKHLEASWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQILQAE 206
            LVSKN+EIE+ACV LEK+I +L+A+
Sbjct: 181 SLVSKNFEIERACVELEKEIAVLEAD 206

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193718415|ref|XP_001946421.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Acyrthosiphon pisum] gi|328723378|ref|XP_003247827.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Acyrthosiphon pisum]

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 133/201 (66%), Positives = 178/201 (88%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PG+REAA++MVE+E RRYRP+KNYLEH+PPL+++ FETE+M
Sbjct: 1   MAGEVIVDALPYIDQGYDEPGIREAAISMVEDEKRRYRPSKNYLEHLPPLNVSAFETEMM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           R +F+R+QQRLPME +SM RY+LP PP GK++D++AW EC+ENSM+QLEHQ+TRI NL+L
Sbjct: 61  RTEFDRLQQRLPMETMSMKRYELPPPPAGKLTDMSAWNECLENSMAQLEHQATRITNLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M +YG E WK YL+ LV CV+ AQ+++ +L+K+IQE+N++RK +Q++ GE+L+ LEA+WV
Sbjct: 121 MTDYGTEAWKSYLEVLVKCVAAAQTQVAKLKKQIQEVNFQRKNVQMQVGEKLRDLEANWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQ 201
           GLVSKNYEIE AC  LEK+I+
Sbjct: 181 GLVSKNYEIELACAHLEKQIR 201

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427787399|gb|JAA59151.1| Putative spliceosome-associated coiled-coil protein [Rhipicephalus pulchellus]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 138/206 (66%), Positives = 171/206 (83%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PG+REA +AMVEEETRRYRPTKNYLEH+P L +++FE+EIM
Sbjct: 1   MAGEVIVDALPYIDQGYDEPGIREAVMAMVEEETRRYRPTKNYLEHLPQLSLHQFESEIM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           + +FER+Q RLPME +SM RY+LPQPP GK +D+A+W+ECV+NS +QLEHQ+TRI NL+L
Sbjct: 61  KTEFERLQSRLPMEMMSMKRYELPQPPAGKTTDVASWSECVDNSSAQLEHQATRIANLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M  YG E WK Y   LV  + Q Q +L +LRKEIQE+NW+RK  Q + GE+LK LEA WV
Sbjct: 121 MARYGAEAWKGYNAALVRMLHQLQRQLQELRKEIQEVNWQRKTTQTEAGEKLKHLEASWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQILQAE 206
            LVSKN+EIE+ACV LEK+I  L+AE
Sbjct: 181 SLVSKNFEIERACVELEKEIAGLEAE 206

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239791247|dbj|BAH72116.1| ACYPI009748 [Acyrthosiphon pisum]

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 132/201 (65%), Positives = 177/201 (88%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PG+REAA++MVE+E RRYRP+KNYLEH+PPL+++ FETE+M
Sbjct: 1   MAGEVIVDALPYIDQGYDEPGIREAAISMVEDEKRRYRPSKNYLEHLPPLNVSAFETEMM 60

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           R +F+R+QQRLPME +SM RY+LP PP GK++D++AW EC+ENSM+QLEHQ+TRI NL+L
Sbjct: 61  RTEFDRLQQRLPMETMSMKRYELPPPPAGKLTDMSAWNECLENSMAQLEHQATRITNLEL 120

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M +YG E WK YL+ LV CV+ AQ+++ +L+K+IQE+N++RK +Q++ GE+L+ LEA+WV
Sbjct: 121 MTDYGTEAWKSYLEVLVKCVAAAQTQVAKLKKQIQEVNFQRKNVQMQVGEKLRDLEANWV 180

Query: 181 GLVSKNYEIEQACVLLEKKIQ 201
           GLV KNYEIE AC  LEK+I+
Sbjct: 181 GLVGKNYEIELACAHLEKQIR 201

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307193499|gb|EFN76276.1| Pre-mRNA-splicing factor SPF27 [Harpegnathos saltator]

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 142/201 (70%), Positives = 170/201 (84%), Gaps = 1/201 (0%)

Query: 1   MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
           MAGEV+VDALPYIDQGYD+PGVREAALAMVEEETRRYRPTKNYLEH+ P+ I  FET ++
Sbjct: 1   MAGEVVVDALPYIDQGYDEPGVREAALAMVEEETRRYRPTKNYLEHLNPMSIT-FETAVL 59

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           + +FER+  RLPME LSM RY+LP PP+GKM+D+AAW E VENS +QLEHQ+TRI NL+L
Sbjct: 60  KHEFERMHSRLPMEVLSMKRYELPPPPSGKMNDLAAWNESVENSSAQLEHQATRICNLEL 119

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           M+EYG E WK YL  LV  + QAQ +L  LRK+IQE+NW+RK MQ +GG++L+ LEA WV
Sbjct: 120 MMEYGCEAWKSYLNVLVQLLGQAQKQLQMLRKKIQEVNWQRKSMQTQGGDKLRALEAQWV 179

Query: 181 GLVSKNYEIEQACVLLEKKIQ 201
           GLVSKNYEIEQACV LE++IQ
Sbjct: 180 GLVSKNYEIEQACVHLEEEIQ 200

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
FB|FBgn0039558	278	CG4980 [Drosophila melanogaste	0.995	0.751	0.612	1.1e-66
UNIPROTKB|E1BTS4	225	BCAS2 "Uncharacterized protein	0.971	0.906	0.6	2e-63
UNIPROTKB|Q5RAX7	226	BCAS2 "Pre-mRNA-splicing facto	0.971	0.902	0.597	8.8e-63
UNIPROTKB|O75934	225	BCAS2 "Pre-mRNA-splicing facto	0.971	0.906	0.590	1.8e-62
MGI|MGI:1915433	225	Bcas2 "breast carcinoma amplif	0.971	0.906	0.590	1.8e-62
RGD|1306485	225	Bcas2 "breast carcinoma amplif	0.971	0.906	0.585	4.8e-62
UNIPROTKB|E2RL57	225	BCAS2 "Uncharacterized protein	0.952	0.888	0.59	6.2e-62
UNIPROTKB|Q5E9D4	225	BCAS2 "Breast carcinoma amplif	0.952	0.888	0.585	1e-61
UNIPROTKB|I6L631	225	BCAS2 "Uncharacterized protein	0.952	0.888	0.585	1e-61
ZFIN|ZDB-GENE-030408-5	259	bcas2 "breast carcinoma amplif	0.980	0.795	0.574	2.7e-61

FB|FBgn0039558 CG4980 [Drosophila melanogaster (taxid:7227)]

 Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
 Identities = 128/209 (61%), Positives = 161/209 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             MAGEV+VDALPYID GYDD GVRE+ALAMVEEE RRYRPTKNYL+H+P    + FET +M
Sbjct:     1 MAGEVIVDALPYIDHGYDDVGVRESALAMVEEECRRYRPTKNYLDHLPLPASSPFETPLM 60

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
               +FERIQ RLPME LSM RY+LP PP+GK+S+++AW E +ENSM+QLEHQ  R +NL+L
Sbjct:    61 ANEFERIQNRLPMETLSMKRYELPPPPSGKLSEVSAWQEAIENSMAQLEHQWVRSLNLEL 120

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             ML+YG E WK YL+      ++AQ +L QL+K+IQ++NW+RK  Q + GE+L+ LEA WV
Sbjct:   121 MLDYGTEAWKSYLEVFTAMQAKAQLQLQQLKKDIQDVNWQRKQAQTQAGERLRSLEAHWV 180

Query:   181 GLVSKNYEIEQACVLLEKKIQILQAEKAK 209
              LVSKNYEIE  CV LEK +   + +  K
Sbjct:   181 LLVSKNYEIETECVELEKIVHAARQQLRK 209

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0006397 "mRNA processing" evidence=IEA

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

UNIPROTKB|E1BTS4 BCAS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 123/205 (60%), Positives = 159/205 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AG+V+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++P  D + FETEIM
Sbjct:     7 VAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDCSAFETEIM 66

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
             R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct:    67 RNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             M ++G   WK Y + LV+ + QAQ +L +LRK IQ++NW+RK MQ+  G +L+++E+ WV
Sbjct:   127 MSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKSIQDLNWQRKNMQLTAGAKLREMESTWV 186

Query:   181 GLVSKNYEIEQACVLLEKKI-QILQ 204
              LVSKNYEIE+  V LE +I QI Q
Sbjct:   187 SLVSKNYEIERTIVQLENEISQIKQ 211

GO:0006397 "mRNA processing" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IEA

UNIPROTKB|Q5RAX7 BCAS2 "Pre-mRNA-splicing factor SPF27" [Pongo abelii (taxid:9601)]

 Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
 Identities = 123/206 (59%), Positives = 159/206 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct:     7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTG-KMSDIAAWTECVENSMSQLEHQSTRIVNLQ 119
             R +FER+  R P+E LSM RY+LP PP+G K +DI AW ECV NSM+QLEHQ+ RI NL+
Sbjct:    67 RNEFERLAARQPIELLSMKRYELPAPPSGQKKNDITAWQECVNNSMAQLEHQAVRIENLE 126

Query:   120 LMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADW 179
             LM ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E++W
Sbjct:   127 LMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNW 186

Query:   180 VGLVSKNYEIEQACVLLEKKI-QILQ 204
             V LVSKNYEIE+  V LE +I QI Q
Sbjct:   187 VSLVSKNYEIERTIVQLENEIYQIKQ 212

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0000974 "Prp19 complex" evidence=ISS

UNIPROTKB|O75934 BCAS2 "Pre-mRNA-splicing factor SPF27" [Homo sapiens (taxid:9606)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 121/205 (59%), Positives = 158/205 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct:     7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
             R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct:    67 RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             M ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E++WV
Sbjct:   127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWV 186

Query:   181 GLVSKNYEIEQACVLLEKKI-QILQ 204
              LVSKNYEIE+  V LE +I QI Q
Sbjct:   187 SLVSKNYEIERTIVQLENEIYQIKQ 211

GO:0006397 "mRNA processing" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0000375 "RNA splicing, via transesterification reactions" evidence=TAS

GO:0008380 "RNA splicing" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005681 "spliceosomal complex" evidence=IDA

MGI|MGI:1915433 Bcas2 "breast carcinoma amplified sequence 2" [Mus musculus (taxid:10090)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 121/205 (59%), Positives = 158/205 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct:     7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
             R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct:    67 RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             M ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E++WV
Sbjct:   127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWV 186

Query:   181 GLVSKNYEIEQACVLLEKKI-QILQ 204
              LVSKNYEIE+  V LE +I QI Q
Sbjct:   187 SLVSKNYEIERTIVQLENEIYQIKQ 211

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=ISO

GO:0006397 "mRNA processing" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008380 "RNA splicing" evidence=IEA

RGD|1306485 Bcas2 "breast carcinoma amplified sequence 2" [Rattus norvegicus (taxid:10116)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 120/205 (58%), Positives = 158/205 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct:     7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
             R +FER+  R P+E LSM RY+LP P +G+ +DI AW +CV NSM+QLEHQ+ RI NL+L
Sbjct:    67 RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQDCVNNSMAQLEHQAVRIENLEL 126

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             M ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E++WV
Sbjct:   127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGAKLREMESNWV 186

Query:   181 GLVSKNYEIEQACVLLEKKI-QILQ 204
              LVSKNYEIE+  V LE +I QI Q
Sbjct:   187 SLVSKNYEIERTIVQLENEIYQIKQ 211

GO:0005681 "spliceosomal complex" evidence=IEA;ISO

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|E2RL57 BCAS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 118/200 (59%), Positives = 154/200 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct:     7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
             R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct:    67 RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             M ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E+ WV
Sbjct:   127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESTWV 186

Query:   181 GLVSKNYEIEQACVLLEKKI 200
              LVSKNYEIE+  V LE +I
Sbjct:   187 SLVSKNYEIERTIVQLENEI 206

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|Q5E9D4 BCAS2 "Breast carcinoma amplified sequence 2" [Bos taurus (taxid:9913)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 117/200 (58%), Positives = 154/200 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct:     7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
             R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct:    67 RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             M ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E+ WV
Sbjct:   127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESTWV 186

Query:   181 GLVSKNYEIEQACVLLEKKI 200
              LVSKNYEIE+  V LE ++
Sbjct:   187 SLVSKNYEIERTIVQLENEL 206

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|I6L631 BCAS2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 117/200 (58%), Positives = 154/200 (77%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++   D + FET+IM
Sbjct:     7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
             R +FER+  R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct:    67 RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             M ++G   WK Y + LV+ +  AQ +L +LRK IQ++NW+RK MQ+  G +L+++E+ WV
Sbjct:   127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESTWV 186

Query:   181 GLVSKNYEIEQACVLLEKKI 200
              LVSKNYEIE+  V LE ++
Sbjct:   187 SLVSKNYEIERTIVQLENEL 206

GO:0006397 "mRNA processing" evidence=IEA

ZFIN|ZDB-GENE-030408-5 bcas2 "breast carcinoma amplified sequence 2" [Danio rerio (taxid:7955)]

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 119/207 (57%), Positives = 155/207 (74%)

Query:     1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
             +AG+V VDALPY DQGYD  GVREAA A+VEEETRRYRPTKNYL ++P  D + FETEIM
Sbjct:    41 VAGDVFVDALPYFDQGYDATGVREAAAALVEEETRRYRPTKNYLSYLPTPDFSAFETEIM 100

Query:    61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
             R +FER+  R PME LSM RY+LP P +G+ +D+ AW +CV NSM+QLEHQ+ RI NL+L
Sbjct:   101 RNEFERLAARQPMELLSMKRYELPAPSSGQKNDMTAWQDCVNNSMAQLEHQAVRIENLEL 160

Query:   121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
             M +YG   WK     L   +  +Q +L  +RKEIQ++NW+RK  Q+ GG +L++LE++WV
Sbjct:   161 MAQYGTNAWKMSNDNLALMIENSQKELQNVRKEIQDLNWQRKNDQLAGGAKLRELESNWV 220

Query:   181 GLVSKNYEIEQACVLLEKKI-QILQAE 206
              LVSKNYEIE+A V LE ++ Q+ Q +
Sbjct:   221 SLVSKNYEIERAIVQLENEVAQMKQQQ 247

GO:0006397 "mRNA processing" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RAX7	SPF27_PONAB	No assigned EC number	0.5970	0.9523	0.8849	yes	N/A
Q5RKQ0	SPF27_DANRE	No assigned EC number	0.585	0.9523	0.8888	yes	N/A
Q949S9	SPF27_ARATH	No assigned EC number	0.3301	0.9952	0.8260	yes	N/A
O75934	SPF27_HUMAN	No assigned EC number	0.59	0.9523	0.8888	yes	N/A
Q9D287	SPF27_MOUSE	No assigned EC number	0.59	0.9523	0.8888	yes	N/A
Q6PBE2	SPF27_XENTR	No assigned EC number	0.58	0.9523	0.8968	yes	N/A
Q54SG7	SPF27_DICDI	No assigned EC number	0.3106	0.9380	0.8716	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	210
pfam05700	221	pfam05700, BCAS2, Breast carcinoma amplified seque	4e-78

>gnl|CDD|218703 pfam05700, BCAS2, Breast carcinoma amplified sequence 2 (BCAS2)

 Score =  233 bits (595), Expect = 4e-78
 Identities = 109/210 (51%), Positives = 150/210 (71%), Gaps = 3/210 (1%)

Query: 4   EVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPL---DINKFETEIM 60
           EV+VDALPYID  YD+PGVREAA A+VEEE +RYRPTKNYLEH+P L   D + FET ++
Sbjct: 6   EVVVDALPYIDDDYDEPGVREAADALVEEEMKRYRPTKNYLEHLPSLQGPDYSLFETPLL 65

Query: 61  RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
           R +FER+Q   PM+ L M RY+LP+PP GK +D  AW   + N+ +QLEHQ  RI+NL+L
Sbjct: 66  RNEFERVQAGQPMKGLDMSRYELPEPPAGKANDDKAWKAALNNARAQLEHQLIRIINLEL 125

Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
           + +YG   W  Y + L   + + + +L +L++EI+E+N +RK  Q + GE+L+ LE  WV
Sbjct: 126 LSKYGKNAWLVYNEQLEALLKRLEKELAELKEEIEEVNRQRKYSQEEAGEKLRSLEQRWV 185

Query: 181 GLVSKNYEIEQACVLLEKKIQILQAEKAKR 210
            LVSKN EIE AC  LE++I+ L+ +KA+ 
Sbjct: 186 DLVSKNLEIEVACAELEQEIEQLKRKKAEL 215

This family consists of several eukaryotic sequences of unknown function. The mammalian members of this family are annotated as breast carcinoma amplified sequence 2 (BCAS2) proteins. BCAS2 is a putative spliceosome associated protein. Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	210
PF05700	221	BCAS2: Breast carcinoma amplified sequence 2 (BCAS	100.0
KOG3096|consensus	225		100.0
PRK10884	206	SH3 domain-containing protein; Provisional	85.02

>PF05700 BCAS2: Breast carcinoma amplified sequence 2 (BCAS2); InterPro: IPR008409 This family consists of several eukaryotic sequences of unknown function

Probab=100.00  E-value=4.2e-67  Score=444.71  Aligned_cols=207  Identities=49%  Similarity=0.817  Sum_probs=199.2

Q ss_pred             CcccccCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCCCCCccCCCC---CCCCcccchHHHHHHHHHHccCCCCCCCccc
Q psy14254          4 EVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPP---LDINKFETEIMRKDFERIQQRLPMEPLSMIR   80 (210)
Q Consensus         4 ~~~vDaLPYiD~~~~~p~~r~~v~~LI~~E~~~~~~~~~yl~~lp~---~~~~~f~sp~l~~E~~Rv~~~~~~~~lD~sR   80 (210)
                      .++||||||||++|++|++|++|++||++||++++|+++||+.+|+   |+++.|.||+|.+||+|+++|.||++||++|
T Consensus         6 ~~~vDaLPYiD~~~~~~~~~~~a~~lI~eE~~~~~~~~~~l~~lp~~~~~~~~~~~t~~l~~E~~R~~~~~~~~~lD~sR   85 (221)
T PF05700_consen    6 EVLVDALPYIDPDYDTPEERQAAEALIEEEMRRYRPTKNYLPHLPPPPEPPFSAFETPLLQAELERVASGEPMQGLDMSR   85 (221)
T ss_pred             ccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCchhHHhCCCCCCCCcccccchhHHHHHHHHHcCCCCCccCHHh
Confidence            4589999999999989999999999999999988889999999998   5556677899999999999999999999999


Q ss_pred             cCCCCCCCCCCCcHHHHHHHHHHHHHHHhHHHHHHHhHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14254         81 YKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWE  160 (210)
Q Consensus        81 Y~l~~p~~~~~~d~~~w~~al~na~~~lehq~~R~~NLeLl~~~g~naW~~~n~~Le~~~~~le~~l~~~r~~ie~vN~~  160 (210)
                      |++|+||+++.+|+++|++||.||+++++|+.+|+.||+||.+||.|+|++||++|+++++.+++++..+|++|++||+.
T Consensus        86 Y~l~~p~~~~~~d~~~w~~al~na~a~lehq~~R~~NLeLl~~~g~naW~~~n~~Le~~~~~le~~l~~~k~~ie~vN~~  165 (221)
T PF05700_consen   86 YELPPPPSGKSNDVEAWKEALDNAYAQLEHQRLRLENLELLSKYGENAWLIHNEQLEAMLKRLEKELAKLKKEIEEVNRE  165 (221)
T ss_pred             cCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy14254        161 RKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAEKAKR  210 (210)
Q Consensus       161 RK~~Q~~~~~~L~~Le~~W~~~v~kn~eie~a~~~Le~ei~~~~~~~~~~  210 (210)
                      ||..|+.+|.+|+.|+.+|+++|+||++|++||..|++||.++|++++++
T Consensus       166 RK~~Q~~~~~~L~~Le~~W~~~v~kn~eie~a~~~Le~ei~~l~~~~~~~  215 (221)
T PF05700_consen  166 RKRRQEEAGEELRYLEQRWKELVSKNLEIEVACEELEQEIEQLKRKAAEL  215 (221)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998764

The mammalian members of this family are annotated as breast carcinoma amplified sequence 2 (BCAS2) proteins []. BCAS2 is a putative spliceosome associated protein [].

>KOG3096|consensus

Probab=100.00  E-value=3.8e-66  Score=423.54  Aligned_cols=208  Identities=53%  Similarity=0.852  Sum_probs=203.4

Q ss_pred             CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCCcccchHHHHHHHHHHccCCCCCCCccc
Q psy14254          1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIR   80 (210)
Q Consensus         1 ~~~~~~vDaLPYiD~~~~~p~~r~~v~~LI~~E~~~~~~~~~yl~~lp~~~~~~f~sp~l~~E~~Rv~~~~~~~~lD~sR   80 (210)
                      |+|.++||||||||++|++|+.|++|.+||++||++++|+++|++++|.|.+++|.||+|.+||+|+.++.||..|||||
T Consensus         1 ~~g~v~vDALPY~D~~Y~e~~~Rs~a~~lVEeE~rr~rptknyl~~lp~p~~s~f~t~~m~ne~er~~~k~pm~~l~msR   80 (225)
T KOG3096|consen    1 TAGEVSVDALPYFDSGYNEPGDRSAAAALVEEECRRYRPTKNYLDHLPLPDYSAFLTDRMENEFERAGKKEPMEALDMSR   80 (225)
T ss_pred             CCcceeeccccccccccCchhhHHHHHHHHHHHHHhhcchhhhhhcCCCcccchhhhhHHHHHHHHHhccCcchhhhHHh
Confidence            68899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCcHHHHHHHHHHHHHHHhHHHHHHHhHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14254         81 YKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWE  160 (210)
Q Consensus        81 Y~l~~p~~~~~~d~~~w~~al~na~~~lehq~~R~~NLeLl~~~g~naW~~~n~~Le~~~~~le~~l~~~r~~ie~vN~~  160 (210)
                      |.+|.||+++.+|..+|+++|.|+.+|++||..|++||+||++||+++|+.+|..|+.++.+++++|.++++.|++|||+
T Consensus        81 yelp~Ppagkr~d~~aW~e~l~ns~aqlEhq~~r~~NLeLM~k~g~eaw~~~ne~le~~l~~aqkelq~~kk~iq~vn~~  160 (225)
T KOG3096|consen   81 YELPAPPAGKRNDDAAWQESLLNSMAQLEHQLVRNENLELMSKHGEEAWKQYNEVLEVMLTHAQKELQKTKKLIQDVNRQ  160 (225)
T ss_pred             hcCCCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14254        161 RKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQAEKA  208 (210)
Q Consensus       161 RK~~Q~~~~~~L~~Le~~W~~~v~kn~eie~a~~~Le~ei~~~~~~~~  208 (210)
                      ||..|+.+|.+|+.||++|+.+|+||++|++||..|+.+|.+.+++.+
T Consensus       161 RK~~Q~~ag~rL~~le~~wvqLv~knyeie~a~~~le~~i~~~r~q~r  208 (225)
T KOG3096|consen  161 RKHAQLTAGERLRELEQKWVQLVSKNYEIEVACVQLETQIDKKRQQER  208 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999997776654

>PRK10884 SH3 domain-containing protein; Provisional

Probab=85.02  E-value=21  Score=30.17  Aligned_cols=11  Identities=9%  Similarity=0.075  Sum_probs=5.1

Q ss_pred             HHccCCCCCCC
Q psy14254         67 IQQRLPMEPLS   77 (210)
Q Consensus        67 v~~~~~~~~lD   77 (210)
                      +.+|.++.-|+
T Consensus        50 l~~G~~v~vl~   60 (206)
T PRK10884         50 LNAGEEVTLLQ   60 (206)
T ss_pred             EcCCCEEEEEE
Confidence            34555544333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	210
3vmx_A	48	Voltage-gated hydrogen channel 1; coiled-coil, ION	90.94
3o0z_A	168	RHO-associated protein kinase 1; coiled-coil, tran	90.81
3ol1_A	119	Vimentin; structural genomics, PSI-2, protein stru	85.8
3a2a_A	58	Voltage-gated hydrogen channel 1; voltage-gated pr	82.96
1gk7_A	39	Vimentin; intermediate filament, heptad repeat; 1.	82.39

>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}

Probab=90.94  E-value=1  Score=28.46  Aligned_cols=37  Identities=24%  Similarity=0.312  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14254        169 GEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQA  205 (210)
Q Consensus       169 ~~~L~~Le~~W~~~v~kn~eie~a~~~Le~ei~~~~~  205 (210)
                      ..+|..|.+-.-.++.++-+++.-|.++++||.++++
T Consensus         3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~   39 (48)
T 3vmx_A            3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK   39 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence            3467788888999999999999999999999999876

>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}

Probab=90.81  E-value=2.5  Score=33.58  Aligned_cols=73  Identities=22%  Similarity=0.106  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14254        132 YLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQA  205 (210)
Q Consensus       132 ~n~~Le~~~~~le~~l~~~r~~ie~vN~~RK~~Q~~~~~~L~~Le~~W~~~v~kn~eie~a~~~Le~ei~~~~~  205 (210)
                      +|+-...+.+.+...-..+|.+.|.+.+.|| .|++....+..++..-+++..++-.++.+...|+.++..+..
T Consensus         4 ~neKi~~LekQL~E~n~kLk~EsE~~~rlkK-~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa   76 (168)
T 3o0z_A            4 ANEKLSQLQKQLEEANDLLRTESDTAVRLRK-SHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQA   76 (168)
T ss_dssp             ------CTHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444555666677778889999999877 477888899999999999999998888888888888876654

>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}

Probab=82.96  E-value=3.3  Score=26.84  Aligned_cols=41  Identities=27%  Similarity=0.330  Sum_probs=31.6

Q ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14254        165 QIKGGEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQILQA  205 (210)
Q Consensus       165 Q~~~~~~L~~Le~~W~~~v~kn~eie~a~~~Le~ei~~~~~  205 (210)
                      ++.+..++..|.+-=..++.|.-+++.-|.+.++||.+|.+
T Consensus         6 ktRse~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~   46 (58)
T 3a2a_A            6 KTRSERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK   46 (58)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455566777777888999999999999999999999875

>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A

Probab=82.39  E-value=4.9  Score=24.11  Aligned_cols=34  Identities=18%  Similarity=0.252  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14254        169 GEQLKKLEADWVGLVSKNYEIEQACVLLEKKIQI  202 (210)
Q Consensus       169 ~~~L~~Le~~W~~~v~kn~eie~a~~~Le~ei~~  202 (210)
                      ..++..|..++..++.|+-.+|..+..|+.+|..
T Consensus         5 Ke~mq~LNdrlAsyidkVR~LE~~N~~Le~~i~~   38 (39)
T 1gk7_A            5 KVELQELNDRFANYIDKVRFLEQQNKILLAELEQ   38 (39)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999998853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00