Psyllid ID: psy14285
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 443 | ||||||
| 328780639 | 1929 | PREDICTED: kinesin 3A [Apis mellifera] | 0.537 | 0.123 | 0.619 | 6e-96 | |
| 380022445 | 1876 | PREDICTED: kinesin-like protein KIF13B, | 0.537 | 0.126 | 0.619 | 7e-96 | |
| 307194257 | 1807 | Kinesin-like protein KIF13A [Harpegnatho | 0.537 | 0.131 | 0.622 | 3e-95 | |
| 242020853 | 1814 | conserved hypothetical protein [Pediculu | 0.539 | 0.131 | 0.633 | 4e-95 | |
| 383858251 | 2117 | PREDICTED: kinesin-like protein KIF13B-l | 0.537 | 0.112 | 0.622 | 4e-95 | |
| 307172257 | 1795 | Kinesin-like protein KIF13A [Camponotus | 0.537 | 0.132 | 0.619 | 6e-95 | |
| 332019903 | 1860 | Kinesin-like protein KIF13A [Acromyrmex | 0.537 | 0.127 | 0.615 | 1e-94 | |
| 340719864 | 1905 | PREDICTED: kinesin-like protein KIF13B-l | 0.537 | 0.124 | 0.619 | 2e-94 | |
| 350416890 | 1909 | PREDICTED: kinesin-like protein KIF13B-l | 0.537 | 0.124 | 0.619 | 3e-94 | |
| 312373079 | 2512 | hypothetical protein AND_18326 [Anophele | 0.537 | 0.094 | 0.591 | 2e-89 |
| >gi|328780639|ref|XP_003249835.1| PREDICTED: kinesin 3A [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 179/289 (61%), Positives = 214/289 (74%), Gaps = 51/289 (17%)
Query: 155 VDILELNDAGDYTPVEVTPSRAPDMLTGGTYQLRQGQQRRIQVLVRPVTNSGTLPIICES 214
V+I ELN+ G+Y+PV+V + D TGG YQLRQGQQRRIQV V+PV NSGTLPIIC+S
Sbjct: 1003 VEIQELNEQGEYSPVDVVVKQ--DTWTGGIYQLRQGQQRRIQVRVKPVQNSGTLPIICQS 1060
Query: 215 VGSIAVGSVCLRSRLQKPLDSYQEEDLAVLREKWSDALVRRRQYLDQQIQRLINKQDKSE 274
+ +IAVGSV +R+RLQ PLDSYQ+EDL++LREKWS+AL+RRRQYLDQQIQ+LINKQD
Sbjct: 1061 ILNIAVGSVSVRNRLQIPLDSYQDEDLSILREKWSEALMRRRQYLDQQIQKLINKQD--- 1117
Query: 275 QDIEREQSLEEQWVNLTEERNAVLVPAPGSGIPGAPADWNPPSDKSEQDIEREQSLVEQW 334
K+EQDIEREQSLV+QW
Sbjct: 1118 --------------------------------------------KTEQDIEREQSLVDQW 1133
Query: 335 VNLTEERNAVLVPAPGSGIPGAPADWNPPSGMEPHIPVLFLDLNADDLSASNSGPELDYP 394
V+LTEERNAVLVPA GSGIPGAPADWNPP+GMEPHIPVLFLDLNADDLS SG E+
Sbjct: 1134 VSLTEERNAVLVPAAGSGIPGAPADWNPPAGMEPHIPVLFLDLNADDLSTHQSGEEVS-- 1191
Query: 395 VAGLHSILPKEHGTKFYNLPLVRHLNQEVGAVATWDSSVHDSQHLNKIT 443
V G++SILPKEHG KFYNLP++RH+ ++V A+A WDSS+HD++HLNK+T
Sbjct: 1192 VTGVNSILPKEHGNKFYNLPIIRHIEKDVCAIAAWDSSIHDNKHLNKVT 1240
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380022445|ref|XP_003695056.1| PREDICTED: kinesin-like protein KIF13B, partial [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|307194257|gb|EFN76653.1| Kinesin-like protein KIF13A [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|242020853|ref|XP_002430865.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516076|gb|EEB18127.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|383858251|ref|XP_003704615.1| PREDICTED: kinesin-like protein KIF13B-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|307172257|gb|EFN63762.1| Kinesin-like protein KIF13A [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|332019903|gb|EGI60364.1| Kinesin-like protein KIF13A [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|340719864|ref|XP_003398365.1| PREDICTED: kinesin-like protein KIF13B-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|350416890|ref|XP_003491154.1| PREDICTED: kinesin-like protein KIF13B-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|312373079|gb|EFR20903.1| hypothetical protein AND_18326 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 443 | ||||||
| FB|FBgn0019968 | 1921 | Khc-73 "Kinesin-73" [Drosophil | 0.363 | 0.083 | 0.662 | 3.5e-71 | |
| UNIPROTKB|I3LC98 | 1356 | KIF13A "Uncharacterized protei | 0.404 | 0.132 | 0.478 | 9.9e-52 | |
| UNIPROTKB|F1MJK2 | 1760 | KIF13A "Uncharacterized protei | 0.404 | 0.101 | 0.482 | 3.3e-54 | |
| UNIPROTKB|E9PDX3 | 1770 | KIF13A "Kinesin-like protein K | 0.404 | 0.101 | 0.482 | 2.1e-54 | |
| UNIPROTKB|Q9H1H9 | 1805 | KIF13A "Kinesin-like protein K | 0.404 | 0.099 | 0.482 | 2.2e-54 | |
| UNIPROTKB|H3BNE9 | 1845 | KIF13A "Kinesin-like protein K | 0.404 | 0.097 | 0.482 | 2.5e-54 | |
| UNIPROTKB|F1PBU1 | 1533 | KIF13A "Uncharacterized protei | 0.401 | 0.116 | 0.451 | 4.7e-59 | |
| RGD|1307825 | 1699 | Kif13a "kinesin family member | 0.404 | 0.105 | 0.521 | 6.1e-59 | |
| UNIPROTKB|J9P3Y4 | 1701 | KIF13A "Uncharacterized protei | 0.404 | 0.105 | 0.477 | 9.5e-54 | |
| UNIPROTKB|F1PBU4 | 1754 | KIF13A "Uncharacterized protei | 0.404 | 0.102 | 0.477 | 1.1e-53 |
| FB|FBgn0019968 Khc-73 "Kinesin-73" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 542 (195.9 bits), Expect = 3.5e-71, Sum P(2) = 3.5e-71
Identities = 108/163 (66%), Positives = 128/163 (78%)
Query: 155 VDILELNDAGDYTPVEVTPSRAPDMLTGGTYQLRQGQQRRIQVLVRPVTNSGTLPIICES 214
V+I ELND G+Y+PVEVT ++LTGG YQLRQGQQRR+ V V+PV NSGTLPIIC+S
Sbjct: 993 VEIHELNDNGEYSPVEVTNRN--EVLTGGIYQLRQGQQRRVNVRVKPVQNSGTLPIICQS 1050
Query: 215 VGSIAVGSVCLRSRLQKPLDSYQEEDLAVLREKWSDALVRRRQYLDQQIQRLINKQDKSE 274
+ ++A+GSV +RSRLQ+PLDSYQEEDL VLREKWS+AL RRRQYLDQQIQ LI K++K+E
Sbjct: 1051 IVNVAIGSVTVRSRLQRPLDSYQEEDLTVLREKWSEALGRRRQYLDQQIQMLIKKEEKNE 1110
Query: 275 QDIEREQSLEEQWVNLTEERNAVLVXXXXXXXXXXXXDWNPPS 317
Q+ ERE SL QWV+LTEERNAVLV W PPS
Sbjct: 1111 QERERELSLVHQWVSLTEERNAVLVPAPGSGIPGAPASWEPPS 1153
|
|
| UNIPROTKB|I3LC98 KIF13A "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MJK2 KIF13A "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PDX3 KIF13A "Kinesin-like protein KIF13A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9H1H9 KIF13A "Kinesin-like protein KIF13A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H3BNE9 KIF13A "Kinesin-like protein KIF13A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PBU1 KIF13A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|1307825 Kif13a "kinesin family member 13A" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9P3Y4 KIF13A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PBU4 KIF13A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 443 | |||
| pfam12473 | 142 | pfam12473, DUF3694, Kinesin protein | 1e-08 | |
| pfam12473 | 142 | pfam12473, DUF3694, Kinesin protein | 3e-04 |
| >gnl|CDD|221593 pfam12473, DUF3694, Kinesin protein | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 1e-08
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 11/96 (11%)
Query: 165 DYTPVEVTPSRAPDMLTGGTYQLRQGQQRRIQVLVRPVTNSGTLPIICES--VGSIA--- 219
+Y PV V A D GT++LRQG QRRI V ++ + VG +
Sbjct: 1 EYVPVPVDQLNALDA---GTFKLRQGLQRRIVVTLKQESGEQLPWEDITRLVVGLVRKAG 57
Query: 220 --VGSVCLRSRLQKPLDSYQEEDLAV-LREKWSDAL 252
+ L L S ++ V + +W +L
Sbjct: 58 KQPDMGLVDPVLSLKLLSGPDDGTNVVIEAQWDSSL 93
|
This domain family is found in eukaryotes, and is typically between 131 and 151 amino acids in length. The family is found in association with pfam00225, pfam00498. There is a single completely conserved residue W that may be functionally important. Length = 142 |
| >gnl|CDD|221593 pfam12473, DUF3694, Kinesin protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 443 | |||
| KOG0241|consensus | 1714 | 100.0 | ||
| KOG0241|consensus | 1714 | 100.0 | ||
| PF12473 | 140 | DUF3694: Kinesin protein ; InterPro: IPR022164 Thi | 99.8 | |
| KOG0245|consensus | 1221 | 99.66 | ||
| PF12473 | 140 | DUF3694: Kinesin protein ; InterPro: IPR022164 Thi | 97.64 | |
| PF12130 | 142 | DUF3585: Protein of unknown function (DUF3585); In | 96.31 | |
| PF12130 | 142 | DUF3585: Protein of unknown function (DUF3585); In | 91.3 |
| >KOG0241|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-112 Score=909.97 Aligned_cols=385 Identities=54% Similarity=0.824 Sum_probs=327.8
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhhhHHHHhcCcceEEEEEEecCCCCCccccccceE-----EEeee-------------
Q psy14285 1 MFRRSLGQLKEDIVRANAFVQEANFLAEEMGRQTKFSVTLQIPPANLSPNRRWNCVI-----QVDIC------------- 62 (443)
Q Consensus 1 ~~~~sl~~l~~~i~~an~l~rea~~l~eem~k~tef~vtLqIp~anl~~n~k~~~f~-----q~~~~------------- 62 (443)
||++||+|||+||++||+||||||||||||.|.|+|+||||||+|||.||||++.|+ |+-=-
T Consensus 653 mf~~SL~rLr~~iv~AN~LVrEAN~laeEm~KkT~y~VTLQIPaanL~~nrkrGa~vsEPaI~VrR~g~gsQiWt~ekLe 732 (1714)
T KOG0241|consen 653 MFRQSLARLREQIVKANTLVREANFLAEEMSKKTDYQVTLQIPAANLSANRKRGAFVSEPAIQVRRKGKGSQIWTIEKLE 732 (1714)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccceeEEEEcchhcCCcccccCceeccceeEEEecCCCceeeeHHHhH
Confidence 799999999999999999999999999999999999999999999999999999984 43210
Q ss_pred cccc--------------------cCCCCc--------------------------------------------------
Q psy14285 63 NALF--------------------TIPSCT-------------------------------------------------- 72 (443)
Q Consensus 63 ~~~~--------------------~~~~~~-------------------------------------------------- 72 (443)
|+|. ...-+-
T Consensus 733 nkLiDMRd~Yqe~ke~~~~~~~~~~k~~DPFyesQEnhnLiGVANvFLE~LF~DvkL~Y~vPIIsQqGEVAGRLhVev~R 812 (1714)
T KOG0241|consen 733 NKLIDMRDLYQEWKEKVPPAKRLYGKRGDPFYESQENHNLIGVANVFLEVLFHDVKLQYAVPIISQQGEVAGRLHVEVMR 812 (1714)
T ss_pred hHHhhHHHHHHHHHhcCCchhhhccccCCccccccccccchhhHHHHHHHHHhhheeccccceecccccccceeEEEEEE
Confidence 1110 000000
Q ss_pred -------------------hhh--hhhhhhhhhhhhhhccCC-----------Cee------------------------
Q psy14285 73 -------------------WSE--LTRKIELWVDILELNDAG-----------DYT------------------------ 96 (443)
Q Consensus 73 -------------------wSe--~~r~i~~~vqilEln~~G-----------~Y~------------------------ 96 (443)
.-. ...+|.-+|.|.+ ..| .|.
T Consensus 813 v~gq~~~~~~ggdev~e~~~~~~~~~~~ltCrVkIk~--AtGLP~~LSnFVFCqYtFw~~~E~~vvaP~vd~ss~~~~~~ 890 (1714)
T KOG0241|consen 813 VTGQVPERVVGGDEVVESSGEIIHRVKKLTCRVKIKE--ATGLPLNLSNFVFCQYTFWDQQESTVVAPVVDPSSQSKDAQ 890 (1714)
T ss_pred eccccchhhccccccccCCCccccccceEEEEEEEee--ccCCcccccceEEEEeeecccccceeeeeccccccccCCCC
Confidence 000 0123334444442 122 121
Q ss_pred -----------eEEEeecCCcccccceeEEeeeecccccccCCCC-------CcccccccccCCCCCCcceeeeeeEEEE
Q psy14285 97 -----------PVEVTPSRAPDMLTQIIILNVTLCYVNKTVGGHP-------RVERCRGLHAGRSHSLPRARHADGVDIL 158 (443)
Q Consensus 97 -----------pVEVtqsf~~~i~tqpIv~ev~~~GvfQl~QG~q-------rr~~vRVsPVSnSG~~~~~k~dlwveI~ 158 (443)
.|-||..|.+|+...-+-+| ||+|+---. ..++.+.....++=.=.++|+++|+||+
T Consensus 891 ~~v~FeH~~df~V~vtEeFlE~~~dgALaIE-----VwGHr~~g~~~~iwe~d~~qaKtrsL~dRW~EvtRriE~Wvei~ 965 (1714)
T KOG0241|consen 891 YTVIFEHCKDFVVNVTEEFLEHISDGALAIE-----VWGHRIAGNGSSIWEVDSLQAKTRSLHDRWNEVTRRIEMWVEIL 965 (1714)
T ss_pred eEEEeecccceEEeehHHHHHHhhcCceEEE-----EeeccccCCCcccccchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 46677777888888888878 555542111 0111111122222222348999999999
Q ss_pred eecCCCCcceeEeecCCCCCCCCCceEeeecceeeEEEEEEeeeecCCCccceecceeeEEeceeeec-cCCCCCccchh
Q psy14285 159 ELNDAGDYTPVEVTPSRAPDMLTGGTYQLRQGQQRRIQVLVRPVTNSGTLPIICESVGSIAVGSVCLR-SRLQKPLDSYQ 237 (443)
Q Consensus 159 ELn~~GeY~PVeV~~~~~~d~~tgGiFqLhQG~QRRI~Vtv~~vh~SG~Lpliw~~V~sv~VG~Vrlr-~k~~~~Ldsyq 237 (443)
|||+||||.||||.+. +|++||||||||||||||++|+|+||++||+|||+++.|.+|+||||.+| .+.++.+||||
T Consensus 966 ElNenGey~~VEv~~a--~dV~TGGI~QLrQGq~RRv~V~Vk~vq~sGtLPl~~e~I~sVsIG~v~~r~tr~~r~~dsyq 1043 (1714)
T KOG0241|consen 966 ELNENGEYAPVEVHQA--KDVNTGGIFQLRQGQSRRVQVTVKPVQHSGTLPLMVECILSVSIGCVTARSTRLQRGLDSYQ 1043 (1714)
T ss_pred HhccCCCcceeEEeec--ccccccceeEeccCceeEEEEEEeeccCCCccceehhhhheeeeeeEEeeeccCcCccchhh
Confidence 9999999999999998 99999999999999999999999999999999999999999999999998 78999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHhhHHHHHHHHhhHhhccccccCCCCCCCCCCCCCCCCC
Q psy14285 238 EEDLAVLREKWSDALVRRRQYLDQQIQRLINKQDKSEQDIEREQSLEEQWVNLTEERNAVLVPAPGSGIPGAPADWNPPS 317 (443)
Q Consensus 238 e~dl~~Lr~kw~~aL~~r~~~Ld~qi~k~~~k~dk~e~d~ere~sL~~qWv~LteERnAV~~P~pgSgiPGApa~w~Pp~ 317 (443)
|+||++||+||++||.+|++|||+||||+.+|++|+|+|.|
T Consensus 1044 eeDL~~lR~kWs~AL~kR~~YLdqQiq~l~~K~~KtE~d~e--------------------------------------- 1084 (1714)
T KOG0241|consen 1044 EEDLNCLREKWSDALIKRREYLDQQIQKLSNKTEKTEDDVE--------------------------------------- 1084 (1714)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHH---------------------------------------
Confidence 99999999999999999999999999999999999999999
Q ss_pred CCcchhHHHhHHHHHHHhhhhhcccceeccCCCCCCCCCCCCCCCCCCCcccccEEEeecCCccCccCCCCCCCCCCcCc
Q psy14285 318 DKSEQDIEREQSLVEQWVNLTEERNAVLVPAPGSGIPGAPADWNPPSGMEPHIPVLFLDLNADDLSASNSGPELDYPVAG 397 (443)
Q Consensus 318 ~~~~~~~~re~~l~~q~~~lteErnav~vP~~~sgipgapa~w~p~~gme~hiPvlfldln~dd~~~~~~~~~~~~~~~g 397 (443)
||++|++|||+|||||||||||+||||||||||+|.||||||+||||||||||+||||+++..++ +.+||
T Consensus 1085 --------RE~~L~~qwv~LTEERnAV~vPapgSgIPGAPadW~pp~GmE~HiPVlFLdLN~DD~s~q~t~de--p~~aG 1154 (1714)
T KOG0241|consen 1085 --------REAQLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNADDLSAQETLDE--PHAAG 1154 (1714)
T ss_pred --------HHHHHHHHHhhhhhhcceeeccCCCCCCCCCCccccCCCCCcccCceEEEecCCCccccccccCC--ccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred ccccCccccCCceeeccccccccceeeEEEeeccccccccccCCCC
Q psy14285 398 LHSILPKEHGTKFYNLPLVRHLNQEVGAVATWDSSVHDSQHLNKIT 443 (443)
Q Consensus 398 ~~s~l~~e~~~~~~~l~i~~~~~~e~~a~~swdss~hd~~~ln~~t 443 (443)
||||||+||+++||+|||+||+|+||+|+|||||||||||+|||+|
T Consensus 1155 ~~s~L~~E~~~~f~~l~I~k~~D~ev~a~aSWDSsvHd~~aLnr~T 1200 (1714)
T KOG0241|consen 1155 VNSILPKEHGSQFFYLPIIKHSDKEVSATASWDSSVHDSPALNRVT 1200 (1714)
T ss_pred ccccccCCcCCceEEEEeEeccCCceeEEeeccccccCchhhcCCC
Confidence 9999999999999999999999999999999999999999999997
|
|
| >KOG0241|consensus | Back alignment and domain information |
|---|
| >PF12473 DUF3694: Kinesin protein ; InterPro: IPR022164 This domain family is found in eukaryotes, and is typically between 131 and 151 amino acids in length | Back alignment and domain information |
|---|
| >KOG0245|consensus | Back alignment and domain information |
|---|
| >PF12473 DUF3694: Kinesin protein ; InterPro: IPR022164 This domain family is found in eukaryotes, and is typically between 131 and 151 amino acids in length | Back alignment and domain information |
|---|
| >PF12130 DUF3585: Protein of unknown function (DUF3585); InterPro: IPR022735 This domain is found in eukaryotes | Back alignment and domain information |
|---|
| >PF12130 DUF3585: Protein of unknown function (DUF3585); InterPro: IPR022735 This domain is found in eukaryotes | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 443 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 9e-04
Identities = 73/491 (14%), Positives = 131/491 (26%), Gaps = 162/491 (32%)
Query: 81 ELWVDILELNDAGDYTPVEVTPSR-------APDMLTQIIILNVTLC-----YVNKTVGG 128
+ +VD + D D P + + D ++ + L TL V K V
Sbjct: 27 DAFVDNFDCKDVQDM-PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE 85
Query: 129 HPR------VERCRGLHAGRSHSLPRARHADGVDILELNDAGDYTPVEVTPSRAPDM--L 180
R + + R S+ + + D L ND + V+ R L
Sbjct: 86 VLRINYKFLMSPIK--TEQRQPSMMTRMYIEQRDRLY-NDNQVFAKYNVS--RLQPYLKL 140
Query: 181 TGGTYQLRQGQQRRI--------QVLVRPVTNSGTLPIICESVGSI---AVGSVC----- 224
+LR + I + V S + C+ I + +
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVALDVCLS--YKVQCKMDFKIFWLNLKNCNSPETV 198
Query: 225 ------LRSRLQKPLDSYQE--------------------------EDLAVLREKWSDAL 252
L ++ S + L VL +
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258
Query: 253 VRRRQYLDQQIQRLINKQDKSEQDI-----EREQSLEEQWVNLTEE-------------- 293
+ + L+ + K D SL+ + LT +
Sbjct: 259 WN---AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 294 ----RNAVLV-PAPGSGIPGAPADWNPPSDKSEQ-DIEREQSLVEQWVNL---TEERN-- 342
R + P S I + D D + + ++ +++E +N+ E R
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 343 ---AVLVPAPGSGIPGA--PADWNPPSGMEP----------------------HIPVLFL 375
+V P P + IP W + IP ++L
Sbjct: 376 DRLSVF-P-PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL 433
Query: 376 DL--NADDLSASNSGPELDYPVAGLHSILPKEHGTKFYNLPLVRHLNQEVGAVATWDSSV 433
+L ++ A LH + +H YN+P + + + D
Sbjct: 434 ELKVKLENEYA-------------LHRSI-VDH----YNIP--KTFDSDDLIPPYLDQYF 473
Query: 434 --HDSQHLNKI 442
H HL I
Sbjct: 474 YSHIGHHLKNI 484
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00