Psyllid ID: psy14338
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1761 | 2.2.26 [Sep-21-2011] | |||||||
| Q9W0S9 | 1773 | Disco-interacting protein | yes | N/A | 0.495 | 0.491 | 0.686 | 0.0 | |
| Q9Y2E4 | 1556 | Disco-interacting protein | yes | N/A | 0.480 | 0.544 | 0.598 | 0.0 | |
| Q8BWT5 | 1523 | Disco-interacting protein | no | N/A | 0.480 | 0.556 | 0.588 | 0.0 | |
| Q9P265 | 1576 | Disco-interacting protein | no | N/A | 0.480 | 0.537 | 0.577 | 0.0 | |
| Q3UH60 | 1574 | Disco-interacting protein | no | N/A | 0.481 | 0.538 | 0.573 | 0.0 | |
| Q14689 | 1571 | Disco-interacting protein | no | N/A | 0.480 | 0.539 | 0.582 | 0.0 | |
| Q6NVJ5 | 1577 | Disco-interacting protein | no | N/A | 0.482 | 0.538 | 0.567 | 0.0 | |
| Q10250 | 1517 | Uncharacterized protein C | yes | N/A | 0.407 | 0.473 | 0.245 | 1e-47 | |
| Q7TXK5 | 619 | Long-chain-fatty-acid--AM | no | N/A | 0.285 | 0.812 | 0.235 | 3e-26 | |
| P95141 | 619 | Long-chain-fatty-acid--AM | yes | N/A | 0.285 | 0.812 | 0.235 | 3e-26 |
| >sp|Q9W0S9|DIP2_DROME Disco-interacting protein 2 OS=Drosophila melanogaster GN=DIP2 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1264 bits (3271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/922 (68%), Positives = 738/922 (80%), Gaps = 50/922 (5%)
Query: 10 GTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAP 69
G+WKVSAKIQQLLNTLKRPKRRPLPEFYED+DIELEIAAN KDPNAPKPEG MTP
Sbjct: 376 ANGKWKVSAKIQQLLNTLKRPKRRPLPEFYEDNDIELEIAANTKDPNAPKPEGSTMTPVQ 435
Query: 70 GESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTL 129
GE L +P+GLPR LE A+QRYG+ ++K+P+ATVLDPNGK++ TLTYGKLLSR+ K+A+ L
Sbjct: 436 GEQLSIPAGLPRTLECALQRYGTNSFKSPMATVLDPNGKVTTTLTYGKLLSRAQKIAHAL 495
Query: 130 LTKPINRTSES-SLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGS 188
TK ++ E +LK GDR+ALVYPNNDP++F+ A+YGC+F G+VP+PIE+PL+ D
Sbjct: 496 STKIFSKGPEQVTLKPGDRVALVYPNNDPLSFITAWYGCMFRGLVPLPIELPLSSSDTPP 555
Query: 189 QQIGFLLGSCDIQVALTSDACLKGLPK-TAAGEVVAFKGWPKLTWFVTEHLAKTPKDW-A 246
QQ+GFLL SC I VALTS+ACLKGLPK T GE+ KGWP+L WFVTEHL K PK++
Sbjct: 556 QQVGFLLSSCGITVALTSEACLKGLPKSTTTGEIAKLKGWPRLQWFVTEHLPKPPKEFNV 615
Query: 247 PQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKR 306
R D AYIEYTTD++GSVMGVTVTRAAM++HCRALT ACHYTEGE +VCVLDFKR
Sbjct: 616 GNLRADDSAAAYIEYTTDKEGSVMGVTVTRAAMINHCRALTMACHYTEGETIVCVLDFKR 675
Query: 307 ETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK 366
E GLWHSVLTSVLNGMH ++IPYALMK+ P+SWMQ+ITK+RAS +VKSRDLHWGLLATK
Sbjct: 676 EVGLWHSVLTSVLNGMHVIFIPYALMKLRPSSWMQLITKHRASCCLVKSRDLHWGLLATK 735
Query: 367 DHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRR 426
DHKDISLSSLR+LLV DGANPWSLSSCDQFLSVFQ+KGLR DAICPCASSSE TVS+RR
Sbjct: 736 DHKDISLSSLRMLLVADGANPWSLSSCDQFLSVFQAKGLRSDAICPCASSSEVFTVSLRR 795
Query: 427 PGRAGV----NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDS 482
PGR +ATGRGVLSM+ LS+GVVRVD E+SLTSLTLQDCGQVMP M VV+ +
Sbjct: 796 PGRGSCGFSPSATGRGVLSMAALSHGVVRVDSEDSLTSLTLQDCGQVMPAAQMVVVRSEG 855
Query: 483 PSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLL------ADGTA-------- 528
P LCKTD+VGEICV S T + Y+GL G++N+TFKV PLL DG
Sbjct: 856 PPVLCKTDQVGEICVTSGSTSASYFGLDGMTNSTFKVQPLLEELEQPKDGNGTVNIISKP 915
Query: 529 LSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGR 588
+ +D Y RSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPM+FIYRGR
Sbjct: 916 IGEDFYVRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMRFIYRGR 975
Query: 589 IAVFSIRVLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLP 648
IAVFSI+VLRDER+CVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVG+YCLALVPPN+LP
Sbjct: 976 IAVFSIKVLRDERVCVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGIYCLALVPPNHLP 1035
Query: 649 KTPLGGIHLSECKRRFLEGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEG 708
KTPLGGIHL E +RRFLEG+LHPANVL+CPHTCVTNLPKPRE+H G
Sbjct: 1036 KTPLGGIHLCEARRRFLEGSLHPANVLMCPHTCVTNLPKPRELHQG-------------- 1081
Query: 709 NLHPANVLLCPHTC-VTNLPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEED 767
+ A L C +T+ + +GPASVMVGN+VQGNRLA A GRD+G + ED
Sbjct: 1082 -VQTAAKLSSSSGCGITD--------TGVGPASVMVGNLVQGNRLAEAHGRDVG--LAED 1130
Query: 768 SDATRKHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERA 827
+ RK Q I+ +L+WRA ++ +H+IFTLLNSKG+ A+ LTCS+LHKRAE++ ALL ER
Sbjct: 1131 CE--RKPQLITGVLRWRANTSPDHIIFTLLNSKGAIAKTLTCSELHKRAEKIAALLQERG 1188
Query: 828 KINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWR 887
+I GDHVALIFPPG+DL+CAFYGCLY+GA+P+TIRPPHPQNL TTLPT + I ++ K
Sbjct: 1189 RIEPGDHVALIFPPGLDLLCAFYGCLYLGAIPITIRPPHPQNLNTTLPTVRMIVDVSK-S 1247
Query: 888 AASTSEHVIFTLLNSKGSAAQL 909
S I LL S+ +A +
Sbjct: 1248 GIVLSIQPIIKLLKSREAATSI 1269
|
May provide positional cues for axon pathfinding and patterning in the central nervous system. Drosophila melanogaster (taxid: 7227) |
| >sp|Q9Y2E4|DIP2C_HUMAN Disco-interacting protein 2 homolog C OS=Homo sapiens GN=DIP2C PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/895 (59%), Positives = 662/895 (73%), Gaps = 48/895 (5%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAPGESLV 74
+VSAKIQQL+NTLKRPKR PL EF+ DD EL P DPN PKPEG M GE L
Sbjct: 253 RVSAKIQQLVNTLKRPKRPPLREFFVDDFEELLEVQQP-DPNQPKPEGAQMLAMRGEQLG 311
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +LEAA+QR+G+ + KAP T +D NGK LTYGKL +RS+KVAY++L K +
Sbjct: 312 VVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYSILHK-L 370
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
E ++ GDR+ALV+PNNDP F+ AFYGC+ A +VPVPIEVPLTR+DAGSQQIGFL
Sbjct: 371 GTKQEPMVRPGDRVALVFPNNDPAAFMAAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFL 430
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + VALTSDAC KGLPK+ GE+ FKGWPKL WFVTE HL+K P+DW P +
Sbjct: 431 LGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA 490
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
++ AYIEY T +DGSV+GVTVTR A+L+HC+ALTQAC YTE E +V VLDFK++ GLWH
Sbjct: 491 NNDTAYIEYKTCKDGSVLGVTVTRTALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWH 550
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LTSV+N MH + IPY+LMKVNP SW+Q + +Y+A VA VKSRD+HW L+A +D +DI+
Sbjct: 551 GILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDIN 610
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQSKGLR + ICPCASS E LTV++RRP
Sbjct: 611 LSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSN 670
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GRGVLSM GL+YGV+RVD E L+ LT+QD G VMPG IM VK D LC+TDE+
Sbjct: 671 QPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGVPQLCRTDEI 730
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552
GE+CV + TG+ Y+GL G++ TF+V P+ + G +S+ + R+GLLGF+GPGGLVFV
Sbjct: 731 GELCVCAVATGTSYYGLSGMTKNTFEVFPMTSSGAPISEYPFIRTGLLGFVGPGGLVFVV 790
Query: 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
G DGLM V+GR+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL DERI ++AEQRPD
Sbjct: 791 GKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDS 850
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
+EE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIHLSE K+ FLEG+LHP
Sbjct: 851 TEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPC 910
Query: 673 NVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKPREI 732
NVL+CPHTCVTNLPKP R+
Sbjct: 911 NVLMCPHTCVTNLPKP-----------------------------------------RQK 929
Query: 733 HSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTSEHV 792
+IGPASVMVGN+V G R+A A GRD+G ED+D RK F+SE+L+WRA +T +H+
Sbjct: 930 QPEIGPASVMVGNLVSGKRIAQASGRDLG--QIEDNDQARKFLFLSEVLQWRAQTTPDHI 987
Query: 793 IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 852
++TLLN +G+ A LTC QLHKRAE++ +L+ER + GDHVAL++PPGIDLI AFYGC
Sbjct: 988 LYTLLNCRGAIANSLTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGC 1047
Query: 853 LYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAA 907
LY G VP+T+RPPHPQN+ TTLPT + I E+ + A + +I LL S+ +AA
Sbjct: 1048 LYAGCVPITVRPPHPQNIATTLPTVKMIVEVSR-SACLMTTQLICKLLRSREAAA 1101
|
Homo sapiens (taxid: 9606) |
| >sp|Q8BWT5|DIP2A_MOUSE Disco-interacting protein 2 homolog A OS=Mus musculus GN=Dip2a PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/895 (58%), Positives = 645/895 (72%), Gaps = 48/895 (5%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAPGESLV 74
+VS+KIQQLLNTLKRPKR PL EF+ DD EL P DPN PKPEG M GE L
Sbjct: 220 RVSSKIQQLLNTLKRPKRPPLKEFFVDDFEELLEVQQP-DPNQPKPEGDQMAVLKGEPLS 278
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +L AA+Q +G+ KAP T LD GK + TLTYGKL SRSLK+AYTLL K +
Sbjct: 279 VGTNGPLSLLAALQLWGTTQPKAPCLTALDTAGKATCTLTYGKLWSRSLKLAYTLLNK-L 337
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
+E L GDR+ALV+PN+DP+ F+ AFYGC+ A +VPVPIEVPLTR+DAGSQQ+GFL
Sbjct: 338 TSKNEPLLNPGDRVALVFPNSDPVMFMVAFYGCLLAELVPVPIEVPLTRKDAGSQQVGFL 397
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + +ALT+DAC KGLPK GEV FKGWP L W V + HL + PKDW P + T
Sbjct: 398 LGSCGVTLALTTDACQKGLPKAPTGEVATFKGWPPLAWLVIDGKHLTRPPKDWYPLAQDT 457
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
AYIEY T ++GS +GVTV+ +++L+ C+ALTQAC YTE E + VLDFKR+ GLWH
Sbjct: 458 GSRTAYIEYKTSKEGSTVGVTVSHSSLLAQCQALTQACGYTEAETLTNVLDFKRDAGLWH 517
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
VLTSV+N MH + IPYALMKVNP SW+Q + Y+A A+VKSRD+HW LLA + +D+
Sbjct: 518 GVLTSVMNRMHVITIPYALMKVNPLSWIQKVCSYKARAALVKSRDMHWSLLAQRGQRDVC 577
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQS+GLRP+ ICPCASS E LTV++RRP G
Sbjct: 578 LSSLRMLIVADGANPWSISSCDAFLNVFQSRGLRPEVICPCASSPEALTVAIRRPPDLGG 637
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
+ VLSM+GLSYGV+RVD E L+ LT+QD GQVMPG + VVK+D YLCKTDE+
Sbjct: 638 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGASVCVVKVDGAPYLCKTDEI 697
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552
GEICV S TG+ Y+GL G++ TF+ P+ ADG +S +TR+GLLGF+GP LVFV
Sbjct: 698 GEICVNSVATGTAYYGLLGITKNTFETVPVTADGVPVSDRPFTRTGLLGFIGPDNLVFVV 757
Query: 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
G DGLM V R+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL D+RI ++AEQRPD
Sbjct: 758 GKLDGLMVVGVRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDDRIVLVAEQRPDA 817
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
SEE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPK PLGGIH+SE K+RFLEG LHP
Sbjct: 818 SEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKAPLGGIHISETKQRFLEGTLHPC 877
Query: 673 NVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKPREI 732
NVL+CPHTCVTNLPKP R+
Sbjct: 878 NVLMCPHTCVTNLPKP-----------------------------------------RQK 896
Query: 733 HSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTSEHV 792
++GPAS++VGN+V G R+A A GR++ EDSD RK F++++L+WRA +T +H
Sbjct: 897 QPEVGPASMIVGNLVAGKRIAQASGRELA--HLEDSDQARKFLFLADVLQWRAHTTPDHP 954
Query: 793 IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 852
+F LLN+KG+ TC QLHKRAERV A L+E+ +++ GDHVAL++PPG+DLI AFYGC
Sbjct: 955 LFLLLNAKGTVTSTATCIQLHKRAERVAAALMEKGRLDAGDHVALVYPPGVDLIAAFYGC 1014
Query: 853 LYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAA 907
LY G VPVT+RPPHPQNL TTLPT + I E+ K A S I LL SK +AA
Sbjct: 1015 LYCGCVPVTVRPPHPQNLGTTLPTVKMIVEVSK-SACVLSTQAITRLLKSKEAAA 1068
|
May provide positional cues for axon pathfinding and patterning in the central nervous system. Mus musculus (taxid: 10090) |
| >sp|Q9P265|DIP2B_HUMAN Disco-interacting protein 2 homolog B OS=Homo sapiens GN=DIP2B PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1067 bits (2760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/895 (57%), Positives = 653/895 (72%), Gaps = 48/895 (5%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAPGESLV 74
+VS KIQQLLNTLKRPKR PL EF+ DD E+ P DPN PKPEG MTP GE L
Sbjct: 272 RVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEVPQP-DPNQPKPEGRQMTPVKGEPLG 330
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V P LE+A+QR+G+ K T LD GK TLTYGKL SRSLK+AYTLL K +
Sbjct: 331 VICNWPPALESALQRWGTTQAKCSCLTALDMTGKPVYTLTYGKLWSRSLKLAYTLLNK-L 389
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
+E LK GDR+ALVYPNNDP+ F+ AFYGC+ A ++PVPIEVPLTR+DAG QQIGFL
Sbjct: 390 GTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFL 449
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC I +ALTS+ CLKGLPKT GE+V FKGWP+L W VT+ +L+K PKDW P
Sbjct: 450 LGSCGIALALTSEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPA 509
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
PAYIEY T ++GSVMGVTV+R AMLSHC+AL+QAC+Y+EGE +V VLDFK++ GLWH
Sbjct: 510 GTEPAYIEYKTSKEGSVMGVTVSRLAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWH 569
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+ +V+N MH + +PY++MK P SW+Q + ++A VA+VK RDLHW ++A +D +D+S
Sbjct: 570 GMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVS 629
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FLS+FQS GL+P+AICPCA+S+E +TV++RRPG G
Sbjct: 630 LSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGA 689
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GR +LSM+GLSYGV+RV+ E+ ++LT+QD G VMPG +M +VK D P LCKTDE+
Sbjct: 690 PLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEI 749
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552
GEICV+S G Y+GL G++ TF+V P+ + G+ + + RSGLLGF+GPG LVFV
Sbjct: 750 GEICVSSRTGGMMYFGLAGVTKNTFEVIPVNSAGSPVGDVPFIRSGLLGFVGPGSLVFVV 809
Query: 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
G DGL+ V+GR+HNADDI+AT LAVE +K +YRGRIAVFS+ V DERI V+AEQRPD
Sbjct: 810 GKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDA 869
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
SEE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIH+S+ K+ FLEG+LHP
Sbjct: 870 SEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPC 929
Query: 673 NVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKPREI 732
N+L+CPHTCVTNLPKPR+ G
Sbjct: 930 NILMCPHTCVTNLPKPRQKQPG-------------------------------------- 951
Query: 733 HSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTSEHV 792
+GPASVMVGN+V G R+A A GRD+G E++D RKHQF++EIL+WRA +T +HV
Sbjct: 952 ---VGPASVMVGNLVAGKRIAQAAGRDLG--QIEENDLVRKHQFLAEILQWRAQATPDHV 1006
Query: 793 IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 852
+F LLN+KG+ +C QLHKRAER+ ++L ++ +N GD+V L++PPGI+LI AFYGC
Sbjct: 1007 LFMLLNAKGTTVCTASCLQLHKRAERIASVLGDKGHLNAGDNVVLLYPPGIELIAAFYGC 1066
Query: 853 LYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAA 907
LY G +PVT+RPPH QNL TLPT + I ++ K TS+ + LL S+ +AA
Sbjct: 1067 LYAGCIPVTVRPPHAQNLTATLPTVRMIVDVSKAACILTSQ-TLMRLLRSREAAA 1120
|
Homo sapiens (taxid: 9606) |
| >sp|Q3UH60|DIP2B_MOUSE Disco-interacting protein 2 homolog B OS=Mus musculus GN=Dip2b PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/895 (57%), Positives = 651/895 (72%), Gaps = 47/895 (5%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAPGESLV 74
+VS KIQQLLNTLKRPKR PL EF+ DD E+ DPN PKPEG MTP GE L
Sbjct: 269 RVSTKIQQLLNTLKRPKRPPLKEFFVDDSEEIVEGIPQPDPNQPKPEGRQMTPVKGEPLG 328
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V P LE+A+QR+GS K P T LD GK TLTYGKL SRSLK+AYTLL K +
Sbjct: 329 VICNWPPALESALQRWGSTQAKCPCLTGLDVTGKPVYTLTYGKLWSRSLKLAYTLLNK-L 387
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
+E LK GDR+ALVYPNNDP+ F+ AFYGC+ A ++PVPIEVPLTR+DAG QQIGFL
Sbjct: 388 GTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFL 447
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC I +ALTS+ CLKGLPKT GE+V FKGWP+L W VT+ +L+K PKDW P
Sbjct: 448 LGSCGIALALTSEICLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKPPKDWQPHISPA 507
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
PAYIEY T ++GSVMGVTV+R AMLS C+AL+QAC+Y+EGE +V VLDFK++ GLWH
Sbjct: 508 GTEPAYIEYKTSKEGSVMGVTVSRLAMLSQCQALSQACNYSEGETVVNVLDFKKDAGLWH 567
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+ +V+N MH + +PY++MK P SW+Q + ++A VA+VK RDLHW ++A +D +D+S
Sbjct: 568 GMFANVMNKMHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVS 627
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FLS+FQS GL+P+AICPCA+S+E +TV++RRPG G
Sbjct: 628 LSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSAEAMTVAIRRPGVPGA 687
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GR +LSM+GLSYGV+RV+ E+ ++LT+QD G VMPG +M +VK D LC+TDE+
Sbjct: 688 PLPGRAILSMNGLSYGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGLPQLCRTDEI 747
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552
GEICV+S G Y+GL G++ TF+V P+ + G+ + + RSGLLGF+GPG LVFV
Sbjct: 748 GEICVSSRTGGMMYFGLAGVTKNTFEVIPVTSSGSPVGDVPFIRSGLLGFVGPGSLVFVV 807
Query: 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
G DGL+ V+GR+HNADDI+AT LAVE +K +YRGRIAVFS+ V DERI V+AEQRPD
Sbjct: 808 GKMDGLLMVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDA 867
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
SEE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIH+S+ K+ FLEG+LHP
Sbjct: 868 SEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQLFLEGSLHPC 927
Query: 673 NVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKPREI 732
N+L+CPHTCVTNLPKPR+ G
Sbjct: 928 NILMCPHTCVTNLPKPRQKQPG-------------------------------------- 949
Query: 733 HSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTSEHV 792
+GPASVMVGN+V G R+A A GRD+G E++D RKHQF++EIL+WRA +T +HV
Sbjct: 950 ---VGPASVMVGNLVAGKRIAQAAGRDLG--QIEENDLVRKHQFLAEILQWRAQATPDHV 1004
Query: 793 IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 852
+F LLN+KG+ +C QLHKRAER+ ++L ++ +N GD+V L++PPGI+LI AFYGC
Sbjct: 1005 LFMLLNAKGTTVCTASCLQLHKRAERIASVLGDKGHLNAGDNVVLLYPPGIELIAAFYGC 1064
Query: 853 LYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAA 907
LY G +PVT+RPPH QNL TLPT + + ++ K T++ + LL S+ +AA
Sbjct: 1065 LYAGCIPVTVRPPHAQNLTATLPTVRMVVDVSKAACVLTTQ-TLMRLLKSREAAA 1118
|
Mus musculus (taxid: 10090) |
| >sp|Q14689|DIP2A_HUMAN Disco-interacting protein 2 homolog A OS=Homo sapiens GN=DIP2A PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/895 (58%), Positives = 644/895 (71%), Gaps = 48/895 (5%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAPGESLV 74
+VS+KIQQLLNTLKRPKR PL EF+ DD EL P DPN PKPEG + GE L
Sbjct: 268 RVSSKIQQLLNTLKRPKRPPLKEFFVDDFEELLEVQQP-DPNQPKPEGSETSVLRGEPLT 326
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
P +L A +QR+G+ K+P T LD GK TLTYGKL SRSLK+AYTLL K +
Sbjct: 327 AGVPRPPSLLATLQRWGTTQPKSPCLTALDTTGKAVYTLTYGKLWSRSLKLAYTLLNK-L 385
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
+E LK GDR+ALV+PN+DP+ F+ AFYGC+ A +VPVPIEVPLTR+DAGSQQ+GFL
Sbjct: 386 TSKNEPLLKPGDRVALVFPNSDPVMFMVAFYGCLLAELVPVPIEVPLTRKDAGSQQVGFL 445
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + +ALT+DAC KGLPK GEV AFKGWP L+W V + HLAK PKDW P + T
Sbjct: 446 LGSCGVFLALTTDACQKGLPKAQTGEVAAFKGWPPLSWLVIDGKHLAKPPKDWHPLAQDT 505
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
AYIEY T ++GS +GVTV+ A++L+ CRALTQAC Y+E E + VLDFKR+ GLWH
Sbjct: 506 GTGTAYIEYKTSKEGSTVGVTVSHASLLAQCRALTQACGYSEAETLTNVLDFKRDAGLWH 565
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
VLTSV+N MH V +PYALMK NP SW+Q + Y+A A+VKSRD+HW LLA + +D+S
Sbjct: 566 GVLTSVMNRMHVVSVPYALMKANPLSWIQKVCFYKARAALVKSRDMHWSLLAQRGQRDVS 625
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQS+GLRP+ ICPCASS E LTV++RRP G
Sbjct: 626 LSSLRMLIVADGANPWSISSCDAFLNVFQSRGLRPEVICPCASSPEALTVAIRRPPDLGG 685
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
+ VLSM+GLSYGV+RVD E L+ LT+QD GQVMPG + VVK++ YLCKTDEV
Sbjct: 686 PPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEV 745
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552
GEICV+S+ TG+ Y+GL G++ F+ P+ G + +TR+GLLGF+GP LVF+
Sbjct: 746 GEICVSSSATGTAYYGLLGITKNVFEAVPVTTGGAPIFDRPFTRTGLLGFIGPDNLVFIV 805
Query: 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
G DGLM R+HNADD++AT LAVEPMKF+YRGRIAVFS+ VL D+RI ++AEQRPD
Sbjct: 806 GKLDGLMVTGVRRHNADDVVATALAVEPMKFVYRGRIAVFSVTVLHDDRIVLVAEQRPDA 865
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
SEE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPK PLGGIH+SE K+RFLEG LHP
Sbjct: 866 SEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKAPLGGIHISETKQRFLEGTLHPC 925
Query: 673 NVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKPREI 732
NVL+CPHTCVTNLPKP R+
Sbjct: 926 NVLMCPHTCVTNLPKP-----------------------------------------RQK 944
Query: 733 HSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTSEHV 792
++GPAS++VGN+V G R+A A GR++ EDSD RK F++++L+WRA +T +H
Sbjct: 945 QPEVGPASMIVGNLVAGKRIAQASGRELA--HLEDSDQARKFLFLADVLQWRAHTTPDHP 1002
Query: 793 IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 852
+F LLN+KG+ TC QLHKRAERV A L+E+ +++ GDHVAL++PPG+DLI AFYGC
Sbjct: 1003 LFLLLNAKGTVTSTATCVQLHKRAERVAAALMEKGRLSVGDHVALVYPPGVDLIAAFYGC 1062
Query: 853 LYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAA 907
LY G VPVT+RPPHPQNL TTLPT + I E+ K T++ V LL SK +AA
Sbjct: 1063 LYCGCVPVTVRPPHPQNLGTTLPTVKMIVEVSKSACVLTTQAVT-RLLRSKEAAA 1116
|
May provide positional cues for axon pathfinding and patterning in the central nervous system. Homo sapiens (taxid: 9606) |
| >sp|Q6NVJ5|DI2BA_DANRE Disco-interacting protein 2 homolog B-A OS=Danio rerio GN=dip2ba PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/895 (56%), Positives = 652/895 (72%), Gaps = 46/895 (5%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAPGESLV 74
+VS KIQQLLNTLKRPKR PL EF+ DD E+ P DPN P+PEG + P GE L
Sbjct: 273 RVSTKIQQLLNTLKRPKRPPLSEFFLDDSEEIVEVPQP-DPNTPRPEGRQIIPVKGEPLG 331
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V S P L+AA+ R+G+ K+P T LD GK TLTYGKL SRSLK+AYTLL K +
Sbjct: 332 VVSNWPPALQAALARWGATQAKSPALTALDITGKPLYTLTYGKLWSRSLKLAYTLLNK-L 390
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
+E LK GDR+ALVYPN+DP F AFYGC+ A ++PVPIEVPL+R+DAGSQQIGFL
Sbjct: 391 GTKNEPVLKPGDRVALVYPNSDPGMFWVAFYGCLLAEVIPVPIEVPLSRKDAGSQQIGFL 450
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + +ALTS+ CLKGLPKT GE++ FKGWP+L W VT+ +L K KDW P
Sbjct: 451 LGSCGVGLALTSEVCLKGLPKTPNGEIMQFKGWPRLKWVVTDTKYLTKPSKDWQPHIPTA 510
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
+ AYIEY ++G+VMGV V++ +ML+HC+ALTQAC+Y EGE +V VLDFK+++GLWH
Sbjct: 511 NTDTAYIEYKASKEGTVMGVAVSKISMLTHCQALTQACNYCEGETLVNVLDFKKDSGLWH 570
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
VLTSV+N +H + +PYA+MK P SW+Q + ++A VA+VK RDLHW ++A +D KD +
Sbjct: 571 GVLTSVMNRIHTISVPYAVMKACPLSWVQRVHVHKARVALVKCRDLHWAMMAHRDQKDTN 630
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQS GL+P+ ICPCASS E +TV++RRPG G
Sbjct: 631 LSSLRMLIVADGANPWSVSSCDAFLNVFQSHGLKPEMICPCASSPEAMTVAIRRPGAPGT 690
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
R +LSM+GLS+GV+RV+ E+ ++LT+QD G VMPG +M +VK D P LCKTDE+
Sbjct: 691 PLPARAILSMAGLSHGVIRVNTEDKNSALTVQDVGHVMPGALMCIVKPDGPPMLCKTDEI 750
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552
GEI + S G+ Y+GLPG++ TF+V P+ + GT + +TR+GLLGF+GPG LVFV
Sbjct: 751 GEIVLNSRAGGTMYYGLPGVTKNTFEVIPVNSGGTPIGDVPFTRTGLLGFVGPGSLVFVV 810
Query: 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
G +GL++V+GR+HNADD++AT LAVEP+K +YRGRIAVFS+ V DER+ ++AEQRPD
Sbjct: 811 GKIEGLLSVSGRRHNADDLVATALAVEPVKTVYRGRIAVFSVTVFYDERVVIVAEQRPDA 870
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
+EE+SFQWMSRVLQA+DSIHQVGLYCLALVP N LPKTPLGGIH+SE K FLEG+LHP
Sbjct: 871 NEEDSFQWMSRVLQAIDSIHQVGLYCLALVPANTLPKTPLGGIHVSETKHHFLEGSLHPC 930
Query: 673 NVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKPREI 732
N+L+CPHTCVTNLPKPR+ P V
Sbjct: 931 NILMCPHTCVTNLPKPRQ-------------------KQPVGV----------------- 954
Query: 733 HSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTSEHV 792
GPAS+MVGN+V G R+A A GRD+G + +D + +RKHQF+SE L+WRA + +HV
Sbjct: 955 ----GPASIMVGNLVAGKRIAQASGRDLG--LIDDQEQSRKHQFLSEALQWRAQTDPDHV 1008
Query: 793 IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 852
++ LLN+KG A TCSQLHKRAE++ A LLER INTGD+V L++PPGIDLI +FYGC
Sbjct: 1009 LYMLLNAKGVAVSTATCSQLHKRAEKITAALLERGGINTGDNVVLLYPPGIDLIASFYGC 1068
Query: 853 LYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAA 907
LY G +PVT+RPPHPQNL TLPT + I ++ K T++ ++ TL + + +A+
Sbjct: 1069 LYAGCIPVTVRPPHPQNLSATLPTVRMIIDVSKAACILTTQTLMKTLRSKEAAAS 1123
|
Danio rerio (taxid: 7955) |
| >sp|Q10250|YD22_SCHPO Uncharacterized protein C56F8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC56F8.02 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 198/808 (24%), Positives = 333/808 (41%), Gaps = 90/808 (11%)
Query: 1016 ETIMLRGMRYHPIDIENSVMRAHKKIAECA---VFTWTNLLVVVV----------ELDGN 1062
+TI H + N++MR K+ +C+ +F + L VV+ E +GN
Sbjct: 698 DTIFFHHYTSHLV---NTIMRKVSKVFDCSAFDIFVNSEHLPVVLLESPAANIPTEANGN 754
Query: 1063 E----SEALDLVPL-VTNAVLEEHHLIVGVAVVVDPGVVP---INSRGEKQRMHLRDGFL 1114
+ LDL+ +LE+H + V ++ P +P N R E M R F
Sbjct: 755 QVVINYGLLDLITTECVECLLEDHQVRVYCVLICAPFTLPRVTKNGRQEIGNMMCRRAFE 814
Query: 1115 ADQLDPIYIWVQSPHNA----SGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFL 1170
L +Y+ G ++ G S YA L++ + Y GF+
Sbjct: 815 HGTLPFLYVKFAVERAVLNLPVGEDAIDGIWSSYASGIRQNLLSDQELQ------YSGFI 868
Query: 1171 RRTSPAG--------------------VAGAPVPPGVSSVDTRS-AAQLLTCSQLHKRAE 1209
R+ VA ++D R + +T + +R
Sbjct: 869 DRSLRYDAKTSVDISSCHTMLQLLQLRVAKNAEDIAYITIDGRGREGKNITWRKFDQRVA 928
Query: 1210 RVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTV 1269
+ L ++ I G V L++ D + A Y C Y+G +P+ + P L +P
Sbjct: 929 TIIRYLQKKKYIKPGRVVVLMYTHSEDFVYALYACFYLGLIPIPVPPLDHMRLSEDVPAF 988
Query: 1270 RMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSW------PTILDTDDMPKK------ 1317
++ VL N L++K S + + P+ + T + K+
Sbjct: 989 LFLIKHYYVSAVLVNSEADTALRAKTTSQHLKQSAMAAKVVLPSFIVTSKISKQTKSIKE 1048
Query: 1318 ---KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIA 1374
KL + P L + +S L +H + S+C+ K C++ R +
Sbjct: 1049 LNVKLDPICLDPAFPALVWAFWSPDHRLTLTA--YNHQTLLSICQIHKETCQMTHKRPLL 1106
Query: 1375 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVME 1434
+ G+GF L V+ G + L+ P + NP L +S+Y+++DT+ ++ +
Sbjct: 1107 GHVRSMSGIGFFHTCLMGVFLGTTTYLLSPVDFANNPLLLFQIISKYKIKDTYATFQTLN 1166
Query: 1435 LCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSF 1494
P L C+ ++ + R ++ K F GLSP A ST +
Sbjct: 1167 YIQNQQPTKWPN-------LSCLENLMIPHDGRISAFYIASLQKYFVKHGLSPYAFSTVY 1219
Query: 1495 GCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGS-PHSLCLLESGKLLPGVKVI 1553
+N I + P+ +DLRALR+ + E P++L LL+SG + ++
Sbjct: 1220 SNCLNPFISTRSYMGAIPTPQLLDLRALRHGLIQPCESADKPYALPLLDSGMVPVSTQLA 1279
Query: 1554 IANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTG 1613
I NP+T+ C GEIW++S NA +F + +F+A G G Y RTG
Sbjct: 1280 IVNPDTRELCRVGEYGEIWMRSSANAISFFQ--STDPVDMMRFNATNSDGFLGNGYVRTG 1337
Query: 1614 YLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHK 1673
LGFL+ TS + APV ++V+G + ET + G+ + P DIE+++ R+H
Sbjct: 1338 DLGFLQITSHSMGPNAPVVD-----MQLLYVLGPIGETFEVNGLSHFPSDIEDTIERSHP 1392
Query: 1674 KIAE--CAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVP 1731
+IA AVF +VVV+E G + A +VP+V N++L+EH +I V G P
Sbjct: 1393 RIARGGTAVFQSAGRVVVVIEALGQDFLAA-IVPVVINSILDEHQIIADVVAFTSRGNFP 1451
Query: 1732 INSRGEKQRMHLRDGFLADQLDPIYVAY 1759
+ EKQR + ++ +L V Y
Sbjct: 1452 RSRLREKQRGKILASWVTGRLRTTQVFY 1479
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q7TXK5|FAA29_MYCBO Long-chain-fatty-acid--AMP ligase FadD29 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=fadD29 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 239/568 (42%), Gaps = 65/568 (11%)
Query: 1197 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
+ +T Q+H+RA V L A ++GD VA++ P G++ I AF G L G + V +
Sbjct: 74 ETVTWWQVHRRAMIVAEELWIYA--SSGDRVAILAPQGLEYIIAFMGVLQAGLIAVPLPV 131
Query: 1257 P----HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTD 1312
P H + + + L D + S+++ ++ + ++ + +S P ++ D
Sbjct: 132 PQFGIHDERISSAL------RDSAPSIILTTSSVIDEVTTYAPHACAAQGQSAPIVVAVD 185
Query: 1313 DMPKKKLAAL----YRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----A 1364
+ AL + P+ AYL ++ +T AG+ +SH V + C +
Sbjct: 186 ALDLSSSRALDPTRFERPST---AYLQYTSGSTRAPAGVVLSHKNVITNCVQLMSDYIGD 242
Query: 1365 CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 1424
E PS ++ L Y +G L ++ + + ++L+ P PA W+ ++++R +
Sbjct: 243 SEKVPSTPVS-WLPFYHDMGLMLGIILPMINQDTAVLMSPMAFLQRPARWMQLLAKHRAQ 301
Query: 1425 DTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALG 1484
+ EL + S + LG VRT +V ER + F++ F+
Sbjct: 302 ISSAPNFGFELAVRRTSDD----DMAGLDLGHVRT-IVTGAERVNVATLRRFTERFAPFN 356
Query: 1485 LSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESG 1544
LS A+ S+G P V D + L + E GS + +
Sbjct: 357 LSETAIRPSYGLAEATVYVATAGPGRAPKSVCFDYQQLSVGQAKRTENGSEGANLVSYGA 416
Query: 1545 KLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT-- 1602
V+++ +PET+ + +GEIWVQ + GY+ + + F ARLVT
Sbjct: 417 PRASTVRIV--DPETRMENPAGTVGEIWVQGDNVGLGYWR---NPQQTEATFRARLVTPS 471
Query: 1603 -GNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHP 1661
G + + RTG LG + +F+ G + E +++ G ++P
Sbjct: 472 PGTSEGPWLRTGDLGVI-------------------FEGELFITGRIKELLVVDGANHYP 512
Query: 1662 IDIENSV--MRAHKKIAECAVFTWTNLLVVVVEL------DGNESEALDLVPL-VTNAVL 1712
DIE ++ + + +A T LV ++EL D E L V V +A+
Sbjct: 513 EDIEATIQEITGGRVVAIAVPDDRTEKLVTIIELMKRGRTDEEEKNRLRTVKREVASAIS 572
Query: 1713 EEHHLIVGVAVVVDPGVVPINSRGEKQR 1740
H L V V+V PG +P+ + G+ +R
Sbjct: 573 RSHRLRVADVVMVAPGSIPVTTSGKVRR 600
|
Catalyzes the activation of the long-chain fatty acids (C22-24 fatty acids) as acyl-adenylates (acyl-AMP), which are then transferred to the multifunctional polyketide synthase PpsA for further chain extension. Involved in the biosynthesis of phenolphthioceroL, which is an important intermedaite in the biosynthesis of phenolic glycolipid (mycosid B). Mycobacterium bovis (taxid: 1765) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|P95141|FAA29_MYCTU Long-chain-fatty-acid--AMP ligase FadD29 OS=Mycobacterium tuberculosis GN=fadD29 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 239/568 (42%), Gaps = 65/568 (11%)
Query: 1197 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
+ +T Q+H+RA V L A ++GD VA++ P G++ I AF G L G + V +
Sbjct: 74 ETVTWWQVHRRAMIVAEELWIYA--SSGDRVAILAPQGLEYIIAFMGVLQAGLIAVPLPV 131
Query: 1257 P----HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTD 1312
P H + + + L D + S+++ ++ + ++ + +S P ++ D
Sbjct: 132 PQFGIHDERISSAL------RDSAPSIILTTSSVIDEVTTYAPHACAAQGQSAPIVVAVD 185
Query: 1313 DMPKKKLAAL----YRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----A 1364
+ AL + P+ AYL ++ +T AG+ +SH V + C +
Sbjct: 186 ALDLSSSRALDPTRFERPST---AYLQYTSGSTRAPAGVVLSHKNVITNCVQLMSDYIGD 242
Query: 1365 CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 1424
E PS ++ L Y +G L ++ + + ++L+ P PA W+ ++++R +
Sbjct: 243 SEKVPSTPVS-WLPFYHDMGLMLGIILPMINQDTAVLMSPMAFLQRPARWMQLLAKHRAQ 301
Query: 1425 DTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALG 1484
+ EL + S + LG VRT +V ER + F++ F+
Sbjct: 302 ISSAPNFGFELAVRRTSDD----DMAGLDLGHVRT-IVTGAERVNVATLRRFTERFAPFN 356
Query: 1485 LSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESG 1544
LS A+ S+G P V D + L + E GS + +
Sbjct: 357 LSETAIRPSYGLAEATVYVATAGPGRAPKSVCFDYQQLSVGQAKRAENGSEGANLVSYGA 416
Query: 1545 KLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT-- 1602
V+++ +PET+ + +GEIWVQ + GY+ + + F ARLVT
Sbjct: 417 PRASTVRIV--DPETRMENPAGTVGEIWVQGDNVGLGYWR---NPQQTEATFRARLVTPS 471
Query: 1603 -GNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHP 1661
G + + RTG LG + +F+ G + E +++ G ++P
Sbjct: 472 PGTSEGPWLRTGDLGVI-------------------FEGELFITGRIKELLVVDGANHYP 512
Query: 1662 IDIENSV--MRAHKKIAECAVFTWTNLLVVVVEL------DGNESEALDLVPL-VTNAVL 1712
DIE ++ + + +A T LV ++EL D E L V V +A+
Sbjct: 513 EDIEATIQEITGGRVVAIAVPDDRTEKLVTIIELMKRGRTDEEEKNRLRTVKREVASAIS 572
Query: 1713 EEHHLIVGVAVVVDPGVVPINSRGEKQR 1740
H L V V+V PG +P+ + G+ +R
Sbjct: 573 RSHRLRVADVVMVAPGSIPVTTSGKVRR 600
|
Catalyzes the activation of the long-chain fatty acids (C22-24 fatty acids) as acyl-adenylates (acyl-AMP), which are then transferred to the multifunctional polyketide synthase PpsA for further chain extension. Involved in the biosynthesis of phenolphthioceroL, which is an important intermedaite in the biosynthesis of phenolic glycolipid (mycosid B). Mycobacterium tuberculosis (taxid: 1773) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1761 | ||||||
| 345496482 | 2267 | PREDICTED: disco-interacting protein 2-l | 0.484 | 0.376 | 0.808 | 0.0 | |
| 270004770 | 1556 | hypothetical protein TcasGA2_TC010545 [T | 0.484 | 0.548 | 0.800 | 0.0 | |
| 242023845 | 1529 | disco-interacting protein, putative [Ped | 0.482 | 0.555 | 0.819 | 0.0 | |
| 307197399 | 1471 | Disco-interacting protein 2 [Harpegnatho | 0.484 | 0.580 | 0.815 | 0.0 | |
| 328699510 | 2215 | PREDICTED: disco-interacting protein 2-l | 0.486 | 0.386 | 0.79 | 0.0 | |
| 328699512 | 1693 | PREDICTED: disco-interacting protein 2-l | 0.486 | 0.506 | 0.79 | 0.0 | |
| 307178100 | 2229 | Disco-interacting protein 2 [Camponotus | 0.469 | 0.371 | 0.782 | 0.0 | |
| 350396808 | 2144 | PREDICTED: disco-interacting protein 2-l | 0.469 | 0.385 | 0.782 | 0.0 | |
| 383866043 | 2194 | PREDICTED: disco-interacting protein 2-l | 0.469 | 0.376 | 0.781 | 0.0 | |
| 328777918 | 2173 | PREDICTED: disco-interacting protein 2 [ | 0.469 | 0.380 | 0.780 | 0.0 |
| >gi|345496482|ref|XP_001601926.2| PREDICTED: disco-interacting protein 2-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 1499 bits (3881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/899 (80%), Positives = 778/899 (86%), Gaps = 45/899 (5%)
Query: 7 SNAGT-GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVM 65
+N GT GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGG M
Sbjct: 928 NNTGTTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGTM 987
Query: 66 TPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKV 125
TPA GE L VPSGLPR++EA+IQRYGSA+YKAP ATVLDPNGKL +TLTYGKLLSRS K+
Sbjct: 988 TPAVGEQLSVPSGLPRSVEASIQRYGSASYKAPAATVLDPNGKLCVTLTYGKLLSRSYKI 1047
Query: 126 AYTLLTKPINRT-SESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRR 184
AYTLL K ++R E LK GDRIALVYPN+DPINF+CAFYGC+ AGIVPVPIEVPLTRR
Sbjct: 1048 AYTLLNKALSRVVGECCLKPGDRIALVYPNDDPINFICAFYGCLQAGIVPVPIEVPLTRR 1107
Query: 185 DAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKD 244
DAGSQQIGFLLGSC IQVALTS+ACLKGLPKTAAGEV+AFKGWPKL WFVTEHL KTPKD
Sbjct: 1108 DAGSQQIGFLLGSCGIQVALTSEACLKGLPKTAAGEVIAFKGWPKLHWFVTEHLGKTPKD 1167
Query: 245 WAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDF 304
W P RLTDDTPAYIEYTTDRDGSVMGVTVTRAAML+HCRALTQAC YTEGEN VCVLDF
Sbjct: 1168 WMPPTRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLAHCRALTQACGYTEGENAVCVLDF 1227
Query: 305 KRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLA 364
KRE GLWHS LTS+LNGMH ++IPYALMKVNPASWMQMITK+RASVAVVKSRDLHWGLLA
Sbjct: 1228 KREVGLWHSTLTSILNGMHVIFIPYALMKVNPASWMQMITKHRASVAVVKSRDLHWGLLA 1287
Query: 365 TKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSV 424
TKDHKDISLS+LRLLLV DGANPWSLSSCDQFLSVFQSKGLRPDA+CPCASSSE LTVSV
Sbjct: 1288 TKDHKDISLSTLRLLLVADGANPWSLSSCDQFLSVFQSKGLRPDAVCPCASSSEALTVSV 1347
Query: 425 RRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPS 484
RRPGRAGVNATGRGVLSMSGLS+GVVRVDQENSLTSLTLQDCGQVMPG I+TV+KM+ P
Sbjct: 1348 RRPGRAGVNATGRGVLSMSGLSFGVVRVDQENSLTSLTLQDCGQVMPGSIVTVIKMEGPP 1407
Query: 485 YLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLG 544
+CKTDEVGEICV S TGSQYWGL GL+N FKV PL A+G L YTRSGLLGFLG
Sbjct: 1408 LVCKTDEVGEICVHSAATGSQYWGLQGLTNNNFKVQPLQAEGQPLGDVEYTRSGLLGFLG 1467
Query: 545 PGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICV 604
PG LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS+RVLRDERICV
Sbjct: 1468 PGNLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSVRVLRDERICV 1527
Query: 605 IAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664
+AEQRPDCSEEESFQWMSRVLQAVDSIH VG+YCLALVPPNYLPKTPLGGIHLSE KRRF
Sbjct: 1528 VAEQRPDCSEEESFQWMSRVLQAVDSIHAVGIYCLALVPPNYLPKTPLGGIHLSETKRRF 1587
Query: 665 LEGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVT 724
LEG LHPANVLLCPHTCVTNLPKPRE+
Sbjct: 1588 LEGTLHPANVLLCPHTCVTNLPKPREV--------------------------------- 1614
Query: 725 NLPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWR 784
HSD+GPASVMVGNIVQGNRLASAQGRDM G ++EDSD +K+QFISEIL+WR
Sbjct: 1615 --------HSDVGPASVMVGNIVQGNRLASAQGRDM-GVLDEDSDNAKKYQFISEILRWR 1665
Query: 785 AASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGID 844
A TS+HVIFT LNSKG+ A L+CSQLHK+AER+G LLL+R +INTGDHVAL+FPPG D
Sbjct: 1666 AVGTSDHVIFTSLNSKGAVAASLSCSQLHKKAERIGNLLLDRGRINTGDHVALLFPPGTD 1725
Query: 845 LICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
LICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K T++ I LL SK
Sbjct: 1726 LICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLILTNQ-TILKLLKSK 1783
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270004770|gb|EFA01218.1| hypothetical protein TcasGA2_TC010545 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 1472 bits (3811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/897 (80%), Positives = 789/897 (87%), Gaps = 43/897 (4%)
Query: 10 GTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAP 69
GTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGG M+PA
Sbjct: 219 GTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGCMSPAI 278
Query: 70 GESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTL 129
GE LVVPSGLPR+LEAAI RYG+ T+KAPVATVLDPNGKL+ +LTYGKLLSRS K+AY L
Sbjct: 279 GEQLVVPSGLPRSLEAAITRYGNGTFKAPVATVLDPNGKLTNSLTYGKLLSRSHKIAYAL 338
Query: 130 LTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQ 189
LTK ++ ++SLKSGDR+ALVYPNNDPINFLCAFYGC+ AGIVPVPIEVP+TRRDAGS
Sbjct: 339 LTKTFSKNGDTSLKSGDRVALVYPNNDPINFLCAFYGCLQAGIVPVPIEVPITRRDAGSL 398
Query: 190 QIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQP 249
QIGFLLGSC +QVALTS+ACLKGLPKT +GEVV FKGWPKLTWFVTEHLA+TPKDW P P
Sbjct: 399 QIGFLLGSCSVQVALTSEACLKGLPKTTSGEVVPFKGWPKLTWFVTEHLARTPKDWTPTP 458
Query: 250 RLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309
RLTD+TPAYIEY+TDRDGSVMGVT+TRAAM+ HCR LT AC+YTEGENMVCVLDFKRE G
Sbjct: 459 RLTDETPAYIEYSTDRDGSVMGVTITRAAMVKHCRMLTMACNYTEGENMVCVLDFKREVG 518
Query: 310 LWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK 369
LWHSVLTSVLNGMH +YIPYALMKVNPASWMQMITKYRA VAVVKSRDLHWGLLATKDHK
Sbjct: 519 LWHSVLTSVLNGMHVIYIPYALMKVNPASWMQMITKYRACVAVVKSRDLHWGLLATKDHK 578
Query: 370 DISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGR 429
DI+LSSLR+LLV DGANPWSLSSCDQFLSVFQ KGLRPDAICPCASSSE LTVSVRRPGR
Sbjct: 579 DINLSSLRMLLVADGANPWSLSSCDQFLSVFQPKGLRPDAICPCASSSEVLTVSVRRPGR 638
Query: 430 AGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKT 489
GVNATGRGVLSM GLSYGVVRVDQENSLTSLTLQDCGQVMPGC++ VVKM+ P+YLCKT
Sbjct: 639 GGVNATGRGVLSMQGLSYGVVRVDQENSLTSLTLQDCGQVMPGCVIVVVKMEGPTYLCKT 698
Query: 490 DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLV 549
DEVGEICV S TG+QYWGL GLSN+TFKV PL ADG +S YTRSGLLGFLGPGGLV
Sbjct: 699 DEVGEICVNSGATGTQYWGLQGLSNSTFKVQPLGADGQPISDAEYTRSGLLGFLGPGGLV 758
Query: 550 FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQR 609
FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQR
Sbjct: 759 FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQR 818
Query: 610 PDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNL 669
PDCSEEESFQWMSRVLQAVDSIHQVG+YCLALVPPN+LPKTPLGGIHLSE K+RF+EG L
Sbjct: 819 PDCSEEESFQWMSRVLQAVDSIHQVGIYCLALVPPNFLPKTPLGGIHLSETKKRFMEGTL 878
Query: 670 HPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKP 729
HPANVL+CPHTCVTNLPKPRE+
Sbjct: 879 HPANVLMCPHTCVTNLPKPREV-------------------------------------- 900
Query: 730 REIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTS 789
H+D+GPASV+VGN+VQGNRLASAQGRDMGG ++E+SD+++K QFI+EIL+WRA TS
Sbjct: 901 ---HTDVGPASVIVGNLVQGNRLASAQGRDMGG-LDEESDSSKKQQFIAEILRWRAQCTS 956
Query: 790 EHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 849
+HV+FTLLNSKG+ A++L+CS+LHKRAER+G LL E+ +INTGDHVALIFPPG+DLICAF
Sbjct: 957 DHVLFTLLNSKGAVAKVLSCSELHKRAERIGNLLNEKGRINTGDHVALIFPPGLDLICAF 1016
Query: 850 YGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSA 906
YGCLY+GAVPVTIRPPHPQNLQTTLPT + I ++ K +++ VI LL SK ++
Sbjct: 1017 YGCLYIGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSTQAVI-KLLRSKEAS 1072
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242023845|ref|XP_002432341.1| disco-interacting protein, putative [Pediculus humanus corporis] gi|212517764|gb|EEB19603.1| disco-interacting protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 1464 bits (3789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 733/894 (81%), Positives = 785/894 (87%), Gaps = 45/894 (5%)
Query: 10 GTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAP 69
GTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEG MTPA
Sbjct: 189 GTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGSTMTPAL 248
Query: 70 GESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTL 129
GE LVVPSGLPRNLEAAIQRYGSA++KAPVATVLDPNGKL +L+YGKLLSRS K+AYTL
Sbjct: 249 GEQLVVPSGLPRNLEAAIQRYGSASFKAPVATVLDPNGKLITSLSYGKLLSRSQKIAYTL 308
Query: 130 LTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQ 189
L + ++ E++LKSGDRIALVYPNNDPINFLCAFYGC+ AGIVPVPIEVPLTRRDAGSQ
Sbjct: 309 LNRSFSK--ETTLKSGDRIALVYPNNDPINFLCAFYGCLQAGIVPVPIEVPLTRRDAGSQ 366
Query: 190 QIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQP 249
QIGFLLGSC I VALTS+ACLKGLPK GEVVAFKGWPKL WFVTEHLAKTPKDW P P
Sbjct: 367 QIGFLLGSCGISVALTSEACLKGLPKVTTGEVVAFKGWPKLQWFVTEHLAKTPKDWLPPP 426
Query: 250 RLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309
+LTDDTPAYIEYTTD+DGSVMGVTVTR AMLSHCR LT AC+YTEGENMVCVLDFKRE G
Sbjct: 427 KLTDDTPAYIEYTTDKDGSVMGVTVTRVAMLSHCRTLTMACNYTEGENMVCVLDFKREVG 486
Query: 310 LWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK 369
LWHSVLTSVLNGMH ++IPYALMKVNPASWMQMITKYRAS+AVVKSRDLHWGLLATKDHK
Sbjct: 487 LWHSVLTSVLNGMHVIFIPYALMKVNPASWMQMITKYRASIAVVKSRDLHWGLLATKDHK 546
Query: 370 DISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGR 429
DISLSSLRLLLV DGANPWSLSSCDQFLSVFQSKGLR DAICPCASSSE LTVS+RRPGR
Sbjct: 547 DISLSSLRLLLVADGANPWSLSSCDQFLSVFQSKGLRSDAICPCASSSEALTVSIRRPGR 606
Query: 430 AGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKT 489
AGVNATGRGVLSMSGLS+GVVRVDQENSLTSLTLQDCGQVMPGC++ VVK++ SYLCKT
Sbjct: 607 AGVNATGRGVLSMSGLSFGVVRVDQENSLTSLTLQDCGQVMPGCVIVVVKIEGTSYLCKT 666
Query: 490 DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLV 549
DEVGEICV S T SQYWGL GL+N+TFKV PL ADG+ L YTRSGLLGFLGPGGLV
Sbjct: 667 DEVGEICVNSGATASQYWGLQGLTNSTFKVQPLQADGSLLGDAEYTRSGLLGFLGPGGLV 726
Query: 550 FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQR 609
FVCGSRDGLMTVTGRKHNADDIIATVLAVEPM+FIYRGRIAVFSIRVLRDERICVIAEQR
Sbjct: 727 FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMRFIYRGRIAVFSIRVLRDERICVIAEQR 786
Query: 610 PDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNL 669
P+CSEEESFQWMSRVLQAVDSIHQVG+YCLALVPPNYLPKTPLGGIHLSE KRR+LEG L
Sbjct: 787 PECSEEESFQWMSRVLQAVDSIHQVGIYCLALVPPNYLPKTPLGGIHLSETKRRYLEGTL 846
Query: 670 HPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKP 729
HPANVLLCPHTCVTNLPKPRE
Sbjct: 847 HPANVLLCPHTCVTNLPKPRE--------------------------------------- 867
Query: 730 REIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTS 789
+H DIGPASV+VGN+VQGNRLASAQGRDMG ++E+SD+ RK+QFISE L+WRAAST+
Sbjct: 868 --VHPDIGPASVIVGNLVQGNRLASAQGRDMGM-IDEESDSARKYQFISETLRWRAASTA 924
Query: 790 EHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 849
+HVIF+LLN+KG+A LLTCSQLHKRAERVG LLLE+ KINTGDHVALIFPPGIDLICAF
Sbjct: 925 DHVIFSLLNAKGTATTLLTCSQLHKRAERVGNLLLEKGKINTGDHVALIFPPGIDLICAF 984
Query: 850 YGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
YGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K ++ +VI LL SK
Sbjct: 985 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNANVI-KLLRSK 1037
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307197399|gb|EFN78671.1| Disco-interacting protein 2 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 1459 bits (3776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 732/898 (81%), Positives = 784/898 (87%), Gaps = 44/898 (4%)
Query: 7 SNAGT-GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVM 65
+N GT GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGG M
Sbjct: 137 NNTGTTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGSM 196
Query: 66 TPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKV 125
T A GESL VPSGLPR+LEAAIQRYGSATYKAPVATVLDPNGKL +TLTYGKLLSRS K+
Sbjct: 197 TSAVGESLSVPSGLPRSLEAAIQRYGSATYKAPVATVLDPNGKLCVTLTYGKLLSRSHKI 256
Query: 126 AYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRD 185
AYTLL K ++R + LK GDRIALVYPNNDPI+F+CAFYGC+ AGIVPVPIEVPLTRRD
Sbjct: 257 AYTLLNKALSRGGDCCLKPGDRIALVYPNNDPISFMCAFYGCLQAGIVPVPIEVPLTRRD 316
Query: 186 AGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDW 245
AGSQQIGFLLGSC IQVALTS+ACLKGLPKTAAGEVVAFKGWPKL WFVTEHL KTPKDW
Sbjct: 317 AGSQQIGFLLGSCGIQVALTSEACLKGLPKTAAGEVVAFKGWPKLHWFVTEHLGKTPKDW 376
Query: 246 APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFK 305
P PRLTDDTPAYIEYTTD+DGSVMGVT+TRAAM+SHCRALTQAC YTEGEN VCVLDFK
Sbjct: 377 LPPPRLTDDTPAYIEYTTDKDGSVMGVTITRAAMMSHCRALTQACGYTEGENAVCVLDFK 436
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365
RE GLWHS LTSVLNGMH ++IPYALMKVNPASWMQMITK+RASVAVVKSRDLHWGLLAT
Sbjct: 437 REVGLWHSTLTSVLNGMHVIFIPYALMKVNPASWMQMITKHRASVAVVKSRDLHWGLLAT 496
Query: 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR 425
KDHKD+SLSSLRLLLV DGANPWSLSSCDQFLSVFQSKGLRPDA+CPCASSSE LTVSVR
Sbjct: 497 KDHKDVSLSSLRLLLVADGANPWSLSSCDQFLSVFQSKGLRPDAVCPCASSSEALTVSVR 556
Query: 426 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485
RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPG I+ V+KM+ +
Sbjct: 557 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGSIVVVIKMEGQPF 616
Query: 486 LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545
+CKTDEVGEICV S TGSQYWGL GL+N TFKV+PL AD T L YTRSGLLGFLGP
Sbjct: 617 ICKTDEVGEICVHSAATGSQYWGLQGLTNNTFKVSPLQADSTPLGDVEYTRSGLLGFLGP 676
Query: 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVI 605
GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS+RVLRDERICV+
Sbjct: 677 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSVRVLRDERICVV 736
Query: 606 AEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665
AEQRPDCSEEESFQWMSRVLQAVDSIH VG+YCLALVPPNYLPKTPLGGIHLSE KRRFL
Sbjct: 737 AEQRPDCSEEESFQWMSRVLQAVDSIHAVGIYCLALVPPNYLPKTPLGGIHLSETKRRFL 796
Query: 666 EGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTN 725
EG LHPANVLLCPHTCVTNLPKPRE+
Sbjct: 797 EGALHPANVLLCPHTCVTNLPKPREV---------------------------------- 822
Query: 726 LPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRA 785
HSD+GPASVMVGNIVQGNRLASAQGRDM G ++EDSD +K+QFISEIL+WRA
Sbjct: 823 -------HSDVGPASVMVGNIVQGNRLASAQGRDM-GVLDEDSDNAKKYQFISEILRWRA 874
Query: 786 ASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDL 845
STS+HVIFT LN+KG+ A L+CSQLHK+AER+G LLL+R ++NTGDHVALIFPPG DL
Sbjct: 875 VSTSDHVIFTSLNAKGAVATSLSCSQLHKKAERIGNLLLDRGRVNTGDHVALIFPPGTDL 934
Query: 846 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K T+++ I LL +K
Sbjct: 935 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLTNQN-ILKLLKTK 991
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328699510|ref|XP_003240957.1| PREDICTED: disco-interacting protein 2-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 1409 bits (3648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/900 (79%), Positives = 779/900 (86%), Gaps = 43/900 (4%)
Query: 9 AGTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPA 68
+ +GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDD+ELEIAANPKDPNAP+PEG M+PA
Sbjct: 852 SSSGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDVELEIAANPKDPNAPRPEGAYMSPA 911
Query: 69 PGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYT 128
GE L VPSGLPRNLEAA+QRYGS+T+KAPVATVLDPNGKLSITLTYGKLLSRS KVAYT
Sbjct: 912 LGEPLSVPSGLPRNLEAALQRYGSSTFKAPVATVLDPNGKLSITLTYGKLLSRSHKVAYT 971
Query: 129 LLTKPINRTSESS--LKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDA 186
LL +P+ + + LK GDR+ALVYPN+DP+NFLC+FYGCIFAGIVPVPIEVPLTRRDA
Sbjct: 972 LLNRPLVKGNGGGECLKHGDRVALVYPNSDPLNFLCSFYGCIFAGIVPVPIEVPLTRRDA 1031
Query: 187 GSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWA 246
GSQQIGFLLGSC +QVALTSD CLKGLPKTA G+VVAFKGWPKL WFVTEHL KTPKDW
Sbjct: 1032 GSQQIGFLLGSCGVQVALTSDVCLKGLPKTATGDVVAFKGWPKLHWFVTEHLPKTPKDWC 1091
Query: 247 PQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKR 306
P P + +DTP+YIEYTTD++GSVMGV+V+R AML+ CRAL+Q+C+YTEG+ MVCVLDFKR
Sbjct: 1092 PPPHIGEDTPSYIEYTTDKEGSVMGVSVSRTAMLNQCRALSQSCNYTEGDTMVCVLDFKR 1151
Query: 307 ETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK 366
ETGLWHSVLTS+LNGMH +YIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK
Sbjct: 1152 ETGLWHSVLTSILNGMHVIYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK 1211
Query: 367 DHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRR 426
DHKDI LSSLRLLLVGDGANPWSLSSCDQFL+VFQSKGLRPDA+CPCASSSECLTVSVRR
Sbjct: 1212 DHKDIVLSSLRLLLVGDGANPWSLSSCDQFLAVFQSKGLRPDALCPCASSSECLTVSVRR 1271
Query: 427 PGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYL 486
PGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP C M VVKMD Y+
Sbjct: 1272 PGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPNCSMVVVKMDGIPYM 1331
Query: 487 CKTDEVGEICVASTGTGS-QYWGLPGLSNTTFKVTPLLADGTALSQDT--YTRSGLLGFL 543
CKTDEVGEIC+ T + YWGLPGLSN TF+V P+ DG + DT YTRSGLLGFL
Sbjct: 1332 CKTDEVGEICMGGLSTTTCNYWGLPGLSNATFRVAPIGEDGKP-TNDTIEYTRSGLLGFL 1390
Query: 544 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERIC 603
GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVF+IRVLRDERIC
Sbjct: 1391 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFAIRVLRDERIC 1450
Query: 604 VIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR 663
VIAEQRP+CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR
Sbjct: 1451 VIAEQRPECSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR 1510
Query: 664 FLEGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCV 723
FL+GNLHPANVL+CPHTCVTNLPKPRE HS + G +
Sbjct: 1511 FLDGNLHPANVLMCPHTCVTNLPKPREAHS------------VGGTV------------- 1545
Query: 724 TNLPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKW 783
SD+GPASVMVG IVQGNRLA+AQGRD+G ++ +SD+ + + FISEILK
Sbjct: 1546 ----------SDVGPASVMVGTIVQGNRLATAQGRDIGI-IDMESDSNKTYLFISEILKM 1594
Query: 784 RAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGI 843
RA +HVIFTL+N+KG AA LTCSQLHKRAE+V LL ERAK+NTGDHVALIFPPGI
Sbjct: 1595 RAIRDPDHVIFTLVNAKGGAAATLTCSQLHKRAEKVSNLLNERAKVNTGDHVALIFPPGI 1654
Query: 844 DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K +++++I LL SK
Sbjct: 1655 DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSTLVLSNQNII-KLLKSK 1713
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328699512|ref|XP_001952804.2| PREDICTED: disco-interacting protein 2-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 1408 bits (3645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/900 (79%), Positives = 779/900 (86%), Gaps = 43/900 (4%)
Query: 9 AGTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPA 68
+ +GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDD+ELEIAANPKDPNAP+PEG M+PA
Sbjct: 330 SSSGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDVELEIAANPKDPNAPRPEGAYMSPA 389
Query: 69 PGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYT 128
GE L VPSGLPRNLEAA+QRYGS+T+KAPVATVLDPNGKLSITLTYGKLLSRS KVAYT
Sbjct: 390 LGEPLSVPSGLPRNLEAALQRYGSSTFKAPVATVLDPNGKLSITLTYGKLLSRSHKVAYT 449
Query: 129 LLTKPINRTSESS--LKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDA 186
LL +P+ + + LK GDR+ALVYPN+DP+NFLC+FYGCIFAGIVPVPIEVPLTRRDA
Sbjct: 450 LLNRPLVKGNGGGECLKHGDRVALVYPNSDPLNFLCSFYGCIFAGIVPVPIEVPLTRRDA 509
Query: 187 GSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWA 246
GSQQIGFLLGSC +QVALTSD CLKGLPKTA G+VVAFKGWPKL WFVTEHL KTPKDW
Sbjct: 510 GSQQIGFLLGSCGVQVALTSDVCLKGLPKTATGDVVAFKGWPKLHWFVTEHLPKTPKDWC 569
Query: 247 PQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKR 306
P P + +DTP+YIEYTTD++GSVMGV+V+R AML+ CRAL+Q+C+YTEG+ MVCVLDFKR
Sbjct: 570 PPPHIGEDTPSYIEYTTDKEGSVMGVSVSRTAMLNQCRALSQSCNYTEGDTMVCVLDFKR 629
Query: 307 ETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK 366
ETGLWHSVLTS+LNGMH +YIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK
Sbjct: 630 ETGLWHSVLTSILNGMHVIYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK 689
Query: 367 DHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRR 426
DHKDI LSSLRLLLVGDGANPWSLSSCDQFL+VFQSKGLRPDA+CPCASSSECLTVSVRR
Sbjct: 690 DHKDIVLSSLRLLLVGDGANPWSLSSCDQFLAVFQSKGLRPDALCPCASSSECLTVSVRR 749
Query: 427 PGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYL 486
PGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP C M VVKMD Y+
Sbjct: 750 PGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPNCSMVVVKMDGIPYM 809
Query: 487 CKTDEVGEICVASTGTGS-QYWGLPGLSNTTFKVTPLLADGTALSQDT--YTRSGLLGFL 543
CKTDEVGEIC+ T + YWGLPGLSN TF+V P+ DG + DT YTRSGLLGFL
Sbjct: 810 CKTDEVGEICMGGLSTTTCNYWGLPGLSNATFRVAPIGEDGKP-TNDTIEYTRSGLLGFL 868
Query: 544 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERIC 603
GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVF+IRVLRDERIC
Sbjct: 869 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFAIRVLRDERIC 928
Query: 604 VIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR 663
VIAEQRP+CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR
Sbjct: 929 VIAEQRPECSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR 988
Query: 664 FLEGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCV 723
FL+GNLHPANVL+CPHTCVTNLPKPRE HS + G +
Sbjct: 989 FLDGNLHPANVLMCPHTCVTNLPKPREAHS------------VGGTV------------- 1023
Query: 724 TNLPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKW 783
SD+GPASVMVG IVQGNRLA+AQGRD+ G ++ +SD+ + + FISEILK
Sbjct: 1024 ----------SDVGPASVMVGTIVQGNRLATAQGRDI-GIIDMESDSNKTYLFISEILKM 1072
Query: 784 RAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGI 843
RA +HVIFTL+N+KG AA LTCSQLHKRAE+V LL ERAK+NTGDHVALIFPPGI
Sbjct: 1073 RAIRDPDHVIFTLVNAKGGAAATLTCSQLHKRAEKVSNLLNERAKVNTGDHVALIFPPGI 1132
Query: 844 DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K +++++I LL SK
Sbjct: 1133 DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSTLVLSNQNII-KLLKSK 1191
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307178100|gb|EFN66927.1| Disco-interacting protein 2 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 1406 bits (3639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/898 (78%), Positives = 757/898 (84%), Gaps = 71/898 (7%)
Query: 7 SNAGT-GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVM 65
+N GT GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGG M
Sbjct: 922 NNTGTTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGSM 981
Query: 66 TPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKV 125
T A GE L VPSGLPR+LEAAIQRYGSA+YKAPVATVLDPNGKL +TLTYGKLLSRS K+
Sbjct: 982 TSAIGEILSVPSGLPRSLEAAIQRYGSASYKAPVATVLDPNGKLCVTLTYGKLLSRSHKI 1041
Query: 126 AYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRD 185
AYTLL K ++R + LK GDRIALVYPNNDPI+F+CAFYGC+ AGIVPVPIEVPLTRRD
Sbjct: 1042 AYTLLNKALSRGGDCCLKPGDRIALVYPNNDPISFMCAFYGCLQAGIVPVPIEVPLTRRD 1101
Query: 186 AGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDW 245
AGSQQIGFLLGSC IQVALTS+ACLKGLPKTAAGEVVAFKGWPKL WFVTEHL KTPKDW
Sbjct: 1102 AGSQQIGFLLGSCGIQVALTSEACLKGLPKTAAGEVVAFKGWPKLHWFVTEHLGKTPKDW 1161
Query: 246 APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFK 305
PRLTDDTPAYIEYTTD+DGSVMGVT+TRAAM++HCRALTQAC YTEGEN VCVLDFK
Sbjct: 1162 LSPPRLTDDTPAYIEYTTDKDGSVMGVTITRAAMMAHCRALTQACGYTEGENAVCVLDFK 1221
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365
RE GLWHS LTSVLNGMH ++IPYALMKVNPASWMQMITK+RASVAVVKSRDLHWGLLAT
Sbjct: 1222 REVGLWHSTLTSVLNGMHVIFIPYALMKVNPASWMQMITKHRASVAVVKSRDLHWGLLAT 1281
Query: 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR 425
KDHKD+SL+SLRLLLV DGANPWSLSSCDQFLSVFQSKGLRPDA+CPCASSSE LTVSVR
Sbjct: 1282 KDHKDVSLASLRLLLVADGANPWSLSSCDQFLSVFQSKGLRPDAVCPCASSSEALTVSVR 1341
Query: 426 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485
RPGRAGVNATGRGVLSMSGLS I+ V+KM+
Sbjct: 1342 RPGRAGVNATGRGVLSMSGLS---------------------------IVVVIKMEGQPS 1374
Query: 486 LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545
+CKTDEVGEICV S TGSQYWGL GL+N TFKV+PL ADGTAL YTRSGLLGFLGP
Sbjct: 1375 ICKTDEVGEICVHSAATGSQYWGLQGLTNNTFKVSPLQADGTALGDVEYTRSGLLGFLGP 1434
Query: 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVI 605
GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS+RVLRDERICV+
Sbjct: 1435 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSVRVLRDERICVV 1494
Query: 606 AEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665
AEQRPDCSEEESFQWMSRVLQAVDSIH VG+YCLALVPPNYLPKTPLGGIHLSE KRRFL
Sbjct: 1495 AEQRPDCSEEESFQWMSRVLQAVDSIHAVGIYCLALVPPNYLPKTPLGGIHLSETKRRFL 1554
Query: 666 EGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTN 725
EG LHPANVLLCPHTCVTNLPKPRE+
Sbjct: 1555 EGALHPANVLLCPHTCVTNLPKPREV---------------------------------- 1580
Query: 726 LPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRA 785
HSD+GPASVMVGNIVQGNRLASAQGRDM G ++EDSD +K+QFISEIL+WRA
Sbjct: 1581 -------HSDVGPASVMVGNIVQGNRLASAQGRDM-GVLDEDSDNAKKYQFISEILRWRA 1632
Query: 786 ASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDL 845
STS+HVIF+ LN+KG+ A L+CSQLHK+AER+G LLL+R +INTGDHVALIFPPG DL
Sbjct: 1633 VSTSDHVIFSSLNAKGAVATSLSCSQLHKKAERIGNLLLDRGRINTGDHVALIFPPGTDL 1692
Query: 846 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K T+++ I LL +K
Sbjct: 1693 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLTNQN-ILKLLKTK 1749
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350396808|ref|XP_003484673.1| PREDICTED: disco-interacting protein 2-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 1390 bits (3599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/898 (78%), Positives = 758/898 (84%), Gaps = 71/898 (7%)
Query: 7 SNAGT-GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVM 65
+N GT GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGG M
Sbjct: 839 NNTGTTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGSM 898
Query: 66 TPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKV 125
T A GE L V +GLPR+LEAAIQRYGSA+YKAPVATVLDPNGKL +TLTYGKLLSRS K+
Sbjct: 899 TSAVGEPLSVAAGLPRSLEAAIQRYGSASYKAPVATVLDPNGKLCVTLTYGKLLSRSHKI 958
Query: 126 AYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRD 185
AYTLL K ++R + LK GDRIALVYPNNDPI+F+CAFYGC+ AGIVPVPIEVPLTRRD
Sbjct: 959 AYTLLNKALSRGGDCCLKPGDRIALVYPNNDPISFMCAFYGCLQAGIVPVPIEVPLTRRD 1018
Query: 186 AGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDW 245
AGSQQIGFLLGSC IQVALTS+ACLKGLPKTAAGEVVAFKGWPKL WFVTEHL KTPKDW
Sbjct: 1019 AGSQQIGFLLGSCGIQVALTSEACLKGLPKTAAGEVVAFKGWPKLHWFVTEHLGKTPKDW 1078
Query: 246 APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFK 305
P PRLTDDTPAYIEYTTD+DGSVMGVTVTR+AML+HCRALTQAC YTEGEN VCVLDFK
Sbjct: 1079 LPPPRLTDDTPAYIEYTTDKDGSVMGVTVTRSAMLAHCRALTQACGYTEGENAVCVLDFK 1138
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365
RE GLWHS LTSVLNGMH ++IPYALMKVNPASWMQMITK+RASVAVVKSRDLHWGLLAT
Sbjct: 1139 REVGLWHSTLTSVLNGMHVIFIPYALMKVNPASWMQMITKHRASVAVVKSRDLHWGLLAT 1198
Query: 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR 425
KDHKDISLSSLRLLLV DGANPWSLSSCDQFLSVFQSKGLRPDA+CPCASSSE LTVSVR
Sbjct: 1199 KDHKDISLSSLRLLLVADGANPWSLSSCDQFLSVFQSKGLRPDAVCPCASSSEALTVSVR 1258
Query: 426 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485
RPGRAGVNATGRGVLSMSGLS I+ V+KM+ +
Sbjct: 1259 RPGRAGVNATGRGVLSMSGLS---------------------------IVVVIKMEGQPF 1291
Query: 486 LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545
+CKTDEVGEICV S+ TG+QYWGL GL+N TFKV+PL ADG+ L YTRSGLLGFLGP
Sbjct: 1292 ICKTDEVGEICVHSSATGNQYWGLQGLTNNTFKVSPLQADGSPLGDVEYTRSGLLGFLGP 1351
Query: 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVI 605
GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS+RVLRDERICV+
Sbjct: 1352 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSVRVLRDERICVV 1411
Query: 606 AEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665
AEQRPDCSEEESFQWMSRVLQAVDSIH VG+YCLALVPPNYLPKTPLGGIHLSE KRRFL
Sbjct: 1412 AEQRPDCSEEESFQWMSRVLQAVDSIHAVGIYCLALVPPNYLPKTPLGGIHLSETKRRFL 1471
Query: 666 EGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTN 725
EG LHPANVLLCPHTCVTNLPKPRE+
Sbjct: 1472 EGTLHPANVLLCPHTCVTNLPKPREV---------------------------------- 1497
Query: 726 LPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRA 785
HSD+GPASVMVGNIVQGNRLASAQGRDM G ++EDSD +K+QFISEIL+WRA
Sbjct: 1498 -------HSDVGPASVMVGNIVQGNRLASAQGRDM-GVLDEDSDNAKKYQFISEILRWRA 1549
Query: 786 ASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDL 845
STS+HVIFT LN+KG+ A L+CSQLHK+AER+G LLL+R +INTGDHVALIFPPG DL
Sbjct: 1550 VSTSDHVIFTSLNAKGAVATSLSCSQLHKKAERIGNLLLDRGRINTGDHVALIFPPGTDL 1609
Query: 846 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K T+++ I LL +K
Sbjct: 1610 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLTNQN-ILKLLKTK 1666
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383866043|ref|XP_003708481.1| PREDICTED: disco-interacting protein 2-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1387 bits (3591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/898 (78%), Positives = 758/898 (84%), Gaps = 71/898 (7%)
Query: 7 SNAGT-GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVM 65
+N GT GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGG M
Sbjct: 888 NNTGTTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGSM 947
Query: 66 TPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKV 125
T A GE+ V +GLPR+LEAAIQRYGSA+YKAPVATVLDPNGKL +TLTYGKLLSRS K+
Sbjct: 948 TSAVGETSSVAAGLPRSLEAAIQRYGSASYKAPVATVLDPNGKLCVTLTYGKLLSRSHKI 1007
Query: 126 AYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRD 185
AYTLL K ++R + LK GDRIALVYPNNDPI+F+CAFYGC+ AGIVPVPIEVPLTRRD
Sbjct: 1008 AYTLLNKALSRGGDCCLKPGDRIALVYPNNDPISFMCAFYGCLQAGIVPVPIEVPLTRRD 1067
Query: 186 AGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDW 245
AGSQQIGFLLGSC IQVALTS+ACLKGLPKTAAGEVVAFKGWPKL WFVTEHL KTPKDW
Sbjct: 1068 AGSQQIGFLLGSCGIQVALTSEACLKGLPKTAAGEVVAFKGWPKLHWFVTEHLGKTPKDW 1127
Query: 246 APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFK 305
P PRLTDDTPAYIEYTTD+DGSVMGVTVTR+AML+HCRALTQAC YTEGEN VCVLDFK
Sbjct: 1128 LPPPRLTDDTPAYIEYTTDKDGSVMGVTVTRSAMLAHCRALTQACGYTEGENAVCVLDFK 1187
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365
RE GLWHS LTSVLNGMH ++IPYALMKVNPASWMQMITK+RASVAVVKSRDLHWGLLAT
Sbjct: 1188 REVGLWHSTLTSVLNGMHVIFIPYALMKVNPASWMQMITKHRASVAVVKSRDLHWGLLAT 1247
Query: 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR 425
KDHKDISLSSLRLLLV DGANPWSLSSCDQFLSVFQSKGLRPDA+CPCASSSE LTVSVR
Sbjct: 1248 KDHKDISLSSLRLLLVADGANPWSLSSCDQFLSVFQSKGLRPDAVCPCASSSEALTVSVR 1307
Query: 426 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485
RPGRAGVNATGRGVLSMSGLS I+ V+KM+ +
Sbjct: 1308 RPGRAGVNATGRGVLSMSGLS---------------------------IVVVIKMEGQPF 1340
Query: 486 LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545
+CKTDEVGEICV S+ TG+QYWGL GL+N TFKV+PL ADGT L YTRSGLLGFLGP
Sbjct: 1341 ICKTDEVGEICVHSSATGNQYWGLQGLTNNTFKVSPLQADGTPLGDVEYTRSGLLGFLGP 1400
Query: 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVI 605
GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS+RVLRDERICV+
Sbjct: 1401 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSVRVLRDERICVV 1460
Query: 606 AEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665
AEQRPDCSEEESFQWMSRVLQAVDSIH VG+YCLALVPPN+LPKTPLGGIHLSE KRRFL
Sbjct: 1461 AEQRPDCSEEESFQWMSRVLQAVDSIHAVGIYCLALVPPNHLPKTPLGGIHLSETKRRFL 1520
Query: 666 EGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTN 725
EG LHPANVLLCPHTCVTNLPKPRE+
Sbjct: 1521 EGTLHPANVLLCPHTCVTNLPKPREV---------------------------------- 1546
Query: 726 LPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRA 785
HSD+GPASVMVGNIVQGNRLASAQGRDM G ++EDSD +K+QFISEIL+WRA
Sbjct: 1547 -------HSDVGPASVMVGNIVQGNRLASAQGRDM-GVLDEDSDNAKKYQFISEILRWRA 1598
Query: 786 ASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDL 845
STS+HVIFT LN+KG+ A L+CSQLHK+AER+G LLL+R +INTGDHVALIFPPG DL
Sbjct: 1599 VSTSDHVIFTSLNAKGAVATSLSCSQLHKKAERIGNLLLDRGRINTGDHVALIFPPGTDL 1658
Query: 846 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K T+++ I LL +K
Sbjct: 1659 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLTNQN-ILKLLKTK 1715
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328777918|ref|XP_391894.4| PREDICTED: disco-interacting protein 2 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 1386 bits (3587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/898 (78%), Positives = 757/898 (84%), Gaps = 71/898 (7%)
Query: 7 SNAGT-GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVM 65
+N GT GRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGG M
Sbjct: 868 NNTGTTGRWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGSM 927
Query: 66 TPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKV 125
T A GE + V +GLPR+LE AIQRYGSA+YKAPVATVLDPNGKL +TLTYGKLLSRS K+
Sbjct: 928 TSAVGEPVSVAAGLPRSLEVAIQRYGSASYKAPVATVLDPNGKLCVTLTYGKLLSRSHKI 987
Query: 126 AYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRD 185
AYTLL K ++R + LK GDRIALVYPNNDPI+F+CAFYGC+ AGIVPVPIEVPLTRRD
Sbjct: 988 AYTLLNKALSRGGDCCLKPGDRIALVYPNNDPISFMCAFYGCLQAGIVPVPIEVPLTRRD 1047
Query: 186 AGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDW 245
AGSQQIGFLLGSC IQVALTS+ACLKGLPKTAAGEVVAFKGWPKL WFVTEHL KTPKDW
Sbjct: 1048 AGSQQIGFLLGSCGIQVALTSEACLKGLPKTAAGEVVAFKGWPKLHWFVTEHLGKTPKDW 1107
Query: 246 APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFK 305
P PRLTDDTPAYIEYTTD+DGSVMGVTVTR+AML+HCRALTQAC YTEGEN VCVLDFK
Sbjct: 1108 LPPPRLTDDTPAYIEYTTDKDGSVMGVTVTRSAMLAHCRALTQACGYTEGENAVCVLDFK 1167
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365
RE GLWHS LTSVLNGMH ++IPYALMKVNPASWMQMITK+RASVAVVKSRDLHWGLLAT
Sbjct: 1168 REVGLWHSTLTSVLNGMHVIFIPYALMKVNPASWMQMITKHRASVAVVKSRDLHWGLLAT 1227
Query: 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR 425
KDHKDISLSSLRLLLV DGANPWSLSSCDQFLSVFQSKGLRPDA+CPCASSSE LTVSVR
Sbjct: 1228 KDHKDISLSSLRLLLVADGANPWSLSSCDQFLSVFQSKGLRPDAVCPCASSSEALTVSVR 1287
Query: 426 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485
RPGRAGVNATGRGVLSMSGLS I+ V+KM+ +
Sbjct: 1288 RPGRAGVNATGRGVLSMSGLS---------------------------IVVVIKMEGQPF 1320
Query: 486 LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545
+CKTDEVGEICV S+ TG+QYWGL GL+N TFKV+PL ADG+ L YTRSGLLGFLGP
Sbjct: 1321 ICKTDEVGEICVHSSATGNQYWGLQGLTNNTFKVSPLQADGSPLGDVEYTRSGLLGFLGP 1380
Query: 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVI 605
GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS+RVLRDERICV+
Sbjct: 1381 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSVRVLRDERICVV 1440
Query: 606 AEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665
AEQRPDCSEEESFQWMSRVLQAVDSIH VG+YCLALVPPNYLPKTPLGGIHLSE KRRFL
Sbjct: 1441 AEQRPDCSEEESFQWMSRVLQAVDSIHAVGIYCLALVPPNYLPKTPLGGIHLSETKRRFL 1500
Query: 666 EGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTN 725
EG LHPANVLLCPHTCVTNLPKPRE+
Sbjct: 1501 EGTLHPANVLLCPHTCVTNLPKPREV---------------------------------- 1526
Query: 726 LPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEEDSDATRKHQFISEILKWRA 785
HSD+GPASVMVGNIVQGNRLASAQGRDM G ++EDSD +K+QFISEIL+WRA
Sbjct: 1527 -------HSDVGPASVMVGNIVQGNRLASAQGRDM-GVLDEDSDNAKKYQFISEILRWRA 1578
Query: 786 ASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDL 845
STS+HVIFT LN+KG+ A L+CSQLHK+AER+G LLL+R +INTGDHVALIFPPG DL
Sbjct: 1579 VSTSDHVIFTSLNAKGAVATSLSCSQLHKKAERIGNLLLDRGRINTGDHVALIFPPGTDL 1638
Query: 846 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSK 903
ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT + I ++ K T+++ I LL +K
Sbjct: 1639 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLTNQN-ILKLLKTK 1695
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1761 | ||||||
| ZFIN|ZDB-GENE-091204-2 | 1578 | dip2a "DIP2 disco-interacting | 0.385 | 0.429 | 0.620 | 0.0 | |
| RGD|1560155 | 1528 | Dip2c "DIP2 disco-interacting | 0.382 | 0.441 | 0.616 | 0.0 | |
| UNIPROTKB|Q9Y2E4 | 1556 | DIP2C "Disco-interacting prote | 0.382 | 0.433 | 0.616 | 0.0 | |
| UNIPROTKB|F1M140 | 1529 | Dip2c "Protein Dip2c" [Rattus | 0.382 | 0.440 | 0.617 | 0.0 | |
| UNIPROTKB|F1NXI6 | 1515 | DIP2A "Uncharacterized protein | 0.382 | 0.444 | 0.619 | 0.0 | |
| UNIPROTKB|F1MKT7 | 1528 | DIP2C "Uncharacterized protein | 0.382 | 0.441 | 0.617 | 0.0 | |
| UNIPROTKB|F1P1Z6 | 1502 | DIP2C "Uncharacterized protein | 0.382 | 0.448 | 0.615 | 0.0 | |
| UNIPROTKB|F1PTV7 | 1492 | DIP2C "Uncharacterized protein | 0.382 | 0.451 | 0.615 | 0.0 | |
| UNIPROTKB|J9NWG7 | 1277 | DIP2C "Uncharacterized protein | 0.382 | 0.527 | 0.615 | 0.0 | |
| UNIPROTKB|H9KZD4 | 1543 | DIP2B "Uncharacterized protein | 0.385 | 0.439 | 0.596 | 0.0 |
| ZFIN|ZDB-GENE-091204-2 dip2a "DIP2 disco-interacting protein 2 homolog A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 2229 (789.7 bits), Expect = 0., Sum P(3) = 0.
Identities = 423/682 (62%), Positives = 515/682 (75%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VS+KIQQLLNTLKRPKR PL EF+ DD EL + EGG M P G+ V
Sbjct: 276 RVSSKIQQLLNTLKRPKRPPLREFFLDDFEEL-LDVQHPDPQQPKPEGGEMRPLSGDPPV 334
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V S P +L ++ R+G+ K+P T LD GK TLTYGKL +RS K+A+TLL K
Sbjct: 335 VSSNRPSSLLGSLHRWGNTQAKSPCLTSLDNTGKPLYTLTYGKLWTRSQKLAFTLLNKLS 394
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
+R +E L+ GDR+ALV+PNNDP+ F+ AFYGC+ A +VPVPIEVPLTR+DAG QQ+GFL
Sbjct: 395 SR-NEPLLRPGDRVALVFPNNDPVMFMVAFYGCLLAELVPVPIEVPLTRKDAGGQQVGFL 453
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + +ALT+DAC KGLPK GEVV FKGWP+L WFVT+ H+ K PKDW P R
Sbjct: 454 LGSCGVTLALTTDACQKGLPKAQTGEVVTFKGWPRLLWFVTDGKHVVKPPKDWHPPIRDA 513
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
+ AYIEY T ++GS MGVTV+ +AML+HC ALTQAC YTEGE + VLDFKR+ GLWH
Sbjct: 514 SNEIAYIEYKTGKEGSTMGVTVSHSAMLAHCHALTQACGYTEGEIITNVLDFKRDAGLWH 573
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
VLTSV+N MH + IPY+LMKVNP SW+Q + Y+A VAVVKSRD+HW LLA +D +DIS
Sbjct: 574 GVLTSVMNRMHVISIPYSLMKVNPLSWIQKVHTYKARVAVVKSRDMHWSLLAQRDQRDIS 633
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQS+GLRP+ ICPCASSSE LTV++RRP GV
Sbjct: 634 LSSLRMLIVADGANPWSISSCDAFLNVFQSRGLRPEVICPCASSSEALTVAIRRPPETGV 693
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
G+ VLSMSGLSYGV+RVD E L+ LT+QD GQVMPG ++ V++++ YLC+TDEV
Sbjct: 694 PPPGKAVLSMSGLSYGVIRVDTEEKLSVLTVQDAGQVMPGGLVCVIRVEGTPYLCRTDEV 753
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GEICV+S+ TG Y+GLPG++ F+ P+ + G +S +TR+
Sbjct: 754 GEICVSSSTTGISYYGLPGMTKNVFETIPVTSSGAPISDRAFTRTSLLGFIGPDNLVFVV 813
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGLM V+GR+HNADD++AT LAVEPMKF+YRGRIAVFS+ VL DERI V+AEQRPD
Sbjct: 814 GKLDGLMVVSGRRHNADDVVATALAVEPMKFVYRGRIAVFSVSVLHDERIVVVAEQRPDA 873
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
SEE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPK PLGGIH+SE K+RFLEG LHP
Sbjct: 874 SEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKAPLGGIHISESKQRFLEGALHPC 933
Query: 673 NVLLCPHTCVTNLPKPREIHSG 694
NVL+CPHTCVTNLPKPR+ G
Sbjct: 934 NVLMCPHTCVTNLPKPRQKQPG 955
|
|
| RGD|1560155 Dip2c "DIP2 disco-interacting protein 2 homolog C (Drosophila)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 2200 (779.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 418/678 (61%), Positives = 511/678 (75%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VSAKIQQL+NTLKRPKR PL EF+ DD EL + EG M GE L
Sbjct: 225 RVSAKIQQLVNTLKRPKRPPLREFFVDDFEEL-LEVQQPDPNQPKPEGAQMLATRGEQLG 283
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +LEAA+QR+G+ + KAP T +D NGK LTYGKL +RS+KVAY +L K +
Sbjct: 284 VVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHK-L 342
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
E ++ GDR+ALV+PNNDP F+ AFYGC+ A +VPVPIEVPLTR+DAGSQQIGFL
Sbjct: 343 GTKQEPMVRPGDRVALVFPNNDPAAFMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFL 402
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + VALTSDAC KGLPK+ GE+ FKGWPKL WFVTE HL+K P+DW P +
Sbjct: 403 LGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA 462
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
++ AYIEY T +DGSV+GVTVTR A+L+HC+ALTQAC YTE E +V VLDFK++ GLWH
Sbjct: 463 NNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWH 522
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LTSV+N MH + IPYALMKVNP SW+Q + +Y+A VA VKSRD+HW L+A +D +D++
Sbjct: 523 GILTSVMNMMHVISIPYALMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDVN 582
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQSKGLR + ICPCASS E LTV++RRP
Sbjct: 583 LSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSN 642
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GRGVLSM GL+YGV+RVD E L+ LT+QD G VMPG IM VK D LC+TDE+
Sbjct: 643 QPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGVPQLCRTDEI 702
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GE+CV + TG+ Y+GL G++ TF+V P+ + G +S+ + R+
Sbjct: 703 GELCVCAVATGTSYYGLSGMTKNTFEVFPMTSSGAPISEYPFIRTGLLGFVGPGGLVFVV 762
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGLM V+GR+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL DERI ++AEQRPD
Sbjct: 763 GKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDS 822
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
+EE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIHLSE K+ FLEG+LHP
Sbjct: 823 TEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPC 882
Query: 673 NVLLCPHTCVTNLPKPRE 690
NVL+CPHTCVTNLPKPR+
Sbjct: 883 NVLMCPHTCVTNLPKPRQ 900
|
|
| UNIPROTKB|Q9Y2E4 DIP2C "Disco-interacting protein 2 homolog C" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 2200 (779.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 418/678 (61%), Positives = 512/678 (75%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VSAKIQQL+NTLKRPKR PL EF+ DD EL + EG M GE L
Sbjct: 253 RVSAKIQQLVNTLKRPKRPPLREFFVDDFEEL-LEVQQPDPNQPKPEGAQMLAMRGEQLG 311
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +LEAA+QR+G+ + KAP T +D NGK LTYGKL +RS+KVAY++L K +
Sbjct: 312 VVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYSILHK-L 370
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
E ++ GDR+ALV+PNNDP F+ AFYGC+ A +VPVPIEVPLTR+DAGSQQIGFL
Sbjct: 371 GTKQEPMVRPGDRVALVFPNNDPAAFMAAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFL 430
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + VALTSDAC KGLPK+ GE+ FKGWPKL WFVTE HL+K P+DW P +
Sbjct: 431 LGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA 490
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
++ AYIEY T +DGSV+GVTVTR A+L+HC+ALTQAC YTE E +V VLDFK++ GLWH
Sbjct: 491 NNDTAYIEYKTCKDGSVLGVTVTRTALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWH 550
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LTSV+N MH + IPY+LMKVNP SW+Q + +Y+A VA VKSRD+HW L+A +D +DI+
Sbjct: 551 GILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDIN 610
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQSKGLR + ICPCASS E LTV++RRP
Sbjct: 611 LSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSN 670
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GRGVLSM GL+YGV+RVD E L+ LT+QD G VMPG IM VK D LC+TDE+
Sbjct: 671 QPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGVPQLCRTDEI 730
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GE+CV + TG+ Y+GL G++ TF+V P+ + G +S+ + R+
Sbjct: 731 GELCVCAVATGTSYYGLSGMTKNTFEVFPMTSSGAPISEYPFIRTGLLGFVGPGGLVFVV 790
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGLM V+GR+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL DERI ++AEQRPD
Sbjct: 791 GKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDS 850
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
+EE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIHLSE K+ FLEG+LHP
Sbjct: 851 TEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPC 910
Query: 673 NVLLCPHTCVTNLPKPRE 690
NVL+CPHTCVTNLPKPR+
Sbjct: 911 NVLMCPHTCVTNLPKPRQ 928
|
|
| UNIPROTKB|F1M140 Dip2c "Protein Dip2c" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 2199 (779.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 419/679 (61%), Positives = 514/679 (75%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VSAKIQQL+NTLKRPKR PL EF+ DD EL + EG M GE L
Sbjct: 225 RVSAKIQQLVNTLKRPKRPPLREFFVDDFEEL-LEVQQPDPNQPKPEGAQMLATRGEQLG 283
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +LEAA+QR+G+ + KAP T +D NGK LTYGKL +RS+KVAY +L K +
Sbjct: 284 VVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHK-L 342
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
E ++ GDR+ALV+PNNDP F+ AFYGC+ A +VPVPIEVPLTR+DAGSQQIGFL
Sbjct: 343 GTKQEPMVRPGDRVALVFPNNDPAAFMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFL 402
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + VALTSDAC KGLPK+ GE+ FKGWPKL WFVTE HL+K P+DW P +
Sbjct: 403 LGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA 462
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
++ AYIEY T +DGSV+GVTVTR A+L+HC+ALTQAC YTE E +V VLDFK++ GLWH
Sbjct: 463 NNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWH 522
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LTSV+N MH + IPYALMKVNP SW+Q + +Y+A VA VKSRD+HW L+A +D +D++
Sbjct: 523 GILTSVMNMMHVISIPYALMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDVN 582
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQSKGLR + ICPCASS E LTV++RR G + +
Sbjct: 583 LSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRIGYSRL 642
Query: 433 NAT-GRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDE 491
A GRGVLSM GL+YGV+RVD E L+ LT+QD G VMPG IM VK D LC+TDE
Sbjct: 643 GAPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGVPQLCRTDE 702
Query: 492 VGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXX 551
+GE+CV + TG+ Y+GL G++ TF+V P+ + G +S+ + R+
Sbjct: 703 IGELCVCAVATGTSYYGLSGMTKNTFEVFPMTSSGAPISEYPFIRTGLLGFVGPGGLVFV 762
Query: 552 XXSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD 611
DGLM V+GR+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL DERI ++AEQRPD
Sbjct: 763 VGKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPD 822
Query: 612 CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHP 671
+EE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIHLSE K+ FLEG+LHP
Sbjct: 823 STEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHP 882
Query: 672 ANVLLCPHTCVTNLPKPRE 690
NVL+CPHTCVTNLPKPR+
Sbjct: 883 CNVLMCPHTCVTNLPKPRQ 901
|
|
| UNIPROTKB|F1NXI6 DIP2A "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 2196 (778.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 420/678 (61%), Positives = 508/678 (74%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VS+KIQQLLNTLKRPKR PL EF+ DD EL + EG M GE +
Sbjct: 211 RVSSKIQQLLNTLKRPKRPPLKEFFVDDFEEL-LEVQQPDPNQPKPEGNQMNVLKGEPVG 269
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +L AA+QR+G+ KAP T LD GK TLTYGKL SRSLK+AYTLL K
Sbjct: 270 VVTNWPPSLLAALQRWGTTQPKAPCLTALDTTGKAVYTLTYGKLWSRSLKLAYTLLNKLT 329
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
+R +E LK GDR+ALV+PN+DP+ F+ AFYGC+ A ++PVPIEVPLTR+DAGSQQIGFL
Sbjct: 330 SR-NEPLLKPGDRVALVFPNSDPVMFMVAFYGCLLAELIPVPIEVPLTRKDAGSQQIGFL 388
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + +ALT+DAC KGLPK GEVV FKGWP+L WFV + HLAK KDW PQ R
Sbjct: 389 LGSCGVTLALTTDACQKGLPKAQTGEVVTFKGWPRLIWFVIDGKHLAKPTKDWHPQLRDA 448
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
AYIEY T ++GS +G++V+ A+ML+HC ALTQAC Y+E E + VLDFKR+ GLWH
Sbjct: 449 SAEIAYIEYKTSKEGSTVGISVSHASMLAHCHALTQACGYSEAETLTNVLDFKRDAGLWH 508
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
VLTSV+N MH + IPYALMKVNP SW+Q + Y+A VAVVKSRD+HW LLA +D +D+S
Sbjct: 509 GVLTSVMNRMHVISIPYALMKVNPLSWIQKVCSYKARVAVVKSRDMHWSLLAQRDQRDVS 568
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQS+GLRP+ ICPCASSSE LTV++RRP G
Sbjct: 569 LSSLRMLIVADGANPWSISSCDAFLNVFQSRGLRPEVICPCASSSEALTVAIRRPPELGG 628
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
G+ VLSM+ LSYGV+RVD E L+ LT+QD GQ+MPG + VVK+D YLCK DEV
Sbjct: 629 PPPGKAVLSMNCLSYGVIRVDTEEKLSVLTVQDVGQIMPGANVCVVKVDGTPYLCKADEV 688
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GEICV S TG Y+GL G++ F+ P+ A G +S +TR+
Sbjct: 689 GEICVNSGATGMAYFGLLGITKNVFEAVPVTASGVPVSDQPFTRTGLLGFVGPDYLVFVV 748
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGL+TV+GR+HNADD++AT LAVEPMKF+YRGRIAVFS+ VL D+RI ++AEQRPD
Sbjct: 749 GKLDGLITVSGRRHNADDVVATALAVEPMKFVYRGRIAVFSVTVLHDDRIVLVAEQRPDA 808
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
SEE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPK PLGGIH+SE K+RFLEG LHP
Sbjct: 809 SEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKAPLGGIHISETKQRFLEGALHPC 868
Query: 673 NVLLCPHTCVTNLPKPRE 690
NVL+CPHTCVTNLPKPR+
Sbjct: 869 NVLMCPHTCVTNLPKPRQ 886
|
|
| UNIPROTKB|F1MKT7 DIP2C "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 2190 (776.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 419/678 (61%), Positives = 509/678 (75%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VSAKIQQL+NTLKRPKR PL EF+ DD EL + EG M GE L
Sbjct: 225 RVSAKIQQLVNTLKRPKRPPLREFFVDDFEEL-LEVQQPDPNQPKPEGAQMLAMRGEQLG 283
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +LEAA+QR+G+ + KAP T +D NGK LTYGKL +RS+KVAY +L K +
Sbjct: 284 VVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHK-L 342
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
E ++ GDR+ALV+PNNDP + AFYGC+ A +VPVPIEVPLTR+DAGSQQIGFL
Sbjct: 343 GTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFL 402
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + VALTSDAC KGLPK+ GE+ FKGWPKL WFVTE HL+K P+DW P +
Sbjct: 403 LGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA 462
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
++ AYIEY T +DGSV+GVTVTR A+L+HC+ALTQAC YTE E +V VLDFK++ GLWH
Sbjct: 463 NNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWH 522
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LTSV+N MH + IPYALMKVNP SW+Q + +Y+A VA VKSRD+HW L+A +D +DI+
Sbjct: 523 GILTSVMNMMHVISIPYALMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDIN 582
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQSKGLR + ICPCASS E LTV++RRP
Sbjct: 583 LSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSN 642
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GRGVLSM GL+YGV+RVD E L+ LT+QD G VMPG IM VK D LC+TDEV
Sbjct: 643 QPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGVPQLCRTDEV 702
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GE+CV + TG Y+GL G++ TF+V P+ + G +S+ + R+
Sbjct: 703 GELCVCAVATGMSYYGLSGMTKNTFEVFPVTSSGAPVSEYPFVRTGLLGFVGPGGLVFVV 762
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGLM V+GR+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL DERI ++AEQRPD
Sbjct: 763 GKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDS 822
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
+EE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIHLSE K+ FLEG+LHP
Sbjct: 823 TEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPC 882
Query: 673 NVLLCPHTCVTNLPKPRE 690
NVL+CPHTCVTNLPKPR+
Sbjct: 883 NVLMCPHTCVTNLPKPRQ 900
|
|
| UNIPROTKB|F1P1Z6 DIP2C "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 2189 (775.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 417/678 (61%), Positives = 510/678 (75%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VSAKIQQL+NTLKRPKR PL EF+ DD EL + EG M GE L
Sbjct: 199 RVSAKIQQLVNTLKRPKRPPLREFFVDDFEEL-LEVQQPDPNQPKPEGAQMLAMRGEQLG 257
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +LEAA+QR+G+ + KAP T +D NGK LTYGKL +RS+KVAY +L K +
Sbjct: 258 VVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHK-L 316
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
E ++ GDR+ LV+PNNDP F+ AFYGC+ A +VPVPIEVPLTR+DAGSQQIGFL
Sbjct: 317 GTKQEPMVRPGDRVTLVFPNNDPAAFMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFL 376
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + VALTSDAC KGLPK+ GE+ FKGWPKL WFVTE HL+K P+DW P +
Sbjct: 377 LGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA 436
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
++ AYIEY T +DGSV+GVTVTR A+L+HC+ALTQAC YTE E +V VLDFK++ GLWH
Sbjct: 437 NNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWH 496
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LTSV+N MH + IPY+LMKVNP SW+Q + +Y+A VA VKSRD+HW L+A +D +DI+
Sbjct: 497 GILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDIN 556
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQSKGLR + ICPCASS E LTV++RRP
Sbjct: 557 LSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSN 616
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GRGVLSM GL+YGV+RVD E L+ LT+QD G VMPG IM VK D LCKTDE+
Sbjct: 617 QPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGIPQLCKTDEI 676
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GE+CV + TG+ Y+GL G++ TF+V P+ + G +++ + R+
Sbjct: 677 GELCVCAIATGTSYYGLSGMTKNTFEVFPMTSSGGPITEYPFIRTGLLGFIGPGGLVFVI 736
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGLM V+GR+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL DERI ++AEQRPD
Sbjct: 737 GKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVSVLHDERIVIVAEQRPDS 796
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
+EE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIHLSE K+ FLEG+LHP
Sbjct: 797 TEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPC 856
Query: 673 NVLLCPHTCVTNLPKPRE 690
NVL+CPHTCVTNLPKPR+
Sbjct: 857 NVLMCPHTCVTNLPKPRQ 874
|
|
| UNIPROTKB|F1PTV7 DIP2C "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 2186 (774.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 417/678 (61%), Positives = 510/678 (75%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VSAKIQQL+NTLKRPKR PL EF+ DD EL + EG M GE L
Sbjct: 187 RVSAKIQQLVNTLKRPKRPPLREFFVDDFEEL-LEVQQPDPNQPKPEGAQMLAMRGEQLG 245
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +LEAA+QR+G+ + KAP T +D NGK LTYGKL +RS+KVAY +L K +
Sbjct: 246 VVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHK-L 304
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
E ++ GDR+ALV+PNNDP + AFYGC+ A +VPVPIEVPLTR+DAGSQQIGFL
Sbjct: 305 GTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFL 364
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + VALTSDAC KGLPK+ GE+ FKGWPKL WFVTE HL+K P+DW P +
Sbjct: 365 LGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA 424
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
++ AYIEY T +DGSV+GVTVTR A+L+HC+ALTQAC YTE E +V VLDFK++ GLWH
Sbjct: 425 NNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWH 484
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LTSV+N MH + IPY+LMKVNP SW+Q + +Y+A VA VKSRD+HW L+A +D +DI+
Sbjct: 485 GILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDIN 544
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQSKGLR + ICPCASS E LTV++RRP
Sbjct: 545 LSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSN 604
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GRGVLSM GL+YGV+RVD E L+ LT+QD G VMPG IM VK D LC+TDE+
Sbjct: 605 QPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGIPQLCRTDEI 664
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GE+CV + TG+ Y+GL G++ TF+V P+ + G +S+ + R+
Sbjct: 665 GELCVCAIATGTSYYGLSGMTKNTFEVFPVTSSGAPVSEYPFVRTGLLGFIGPGGLVFVV 724
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGLM V+GR+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL DERI ++AEQRPD
Sbjct: 725 GKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDS 784
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
+EE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIHLSE K+ FLEG+LHP
Sbjct: 785 TEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPC 844
Query: 673 NVLLCPHTCVTNLPKPRE 690
NVL+CPHTCVTNLPKPR+
Sbjct: 845 NVLMCPHTCVTNLPKPRQ 862
|
|
| UNIPROTKB|J9NWG7 DIP2C "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 2186 (774.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 417/678 (61%), Positives = 510/678 (75%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VSAKIQQL+NTLKRPKR PL EF+ DD EL + EG M GE L
Sbjct: 146 RVSAKIQQLVNTLKRPKRPPLREFFVDDFEEL-LEVQQPDPNQPKPEGAQMLAMRGEQLG 204
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V + P +LEAA+QR+G+ + KAP T +D NGK LTYGKL +RS+KVAY +L K +
Sbjct: 205 VVTNWPPSLEAALQRWGTISPKAPCLTTMDTNGKPLYILTYGKLWTRSMKVAYNILHK-L 263
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
E ++ GDR+ALV+PNNDP + AFYGC+ A +VPVPIEVPLTR+DAGSQQIGFL
Sbjct: 264 GTKQEPMVRPGDRVALVFPNNDPAASMVAFYGCLLAEVVPVPIEVPLTRKDAGSQQIGFL 323
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC + VALTSDAC KGLPK+ GE+ FKGWPKL WFVTE HL+K P+DW P +
Sbjct: 324 LGSCGVTVALTSDACHKGLPKSPTGEIPQFKGWPKLLWFVTESKHLSKPPRDWFPHIKDA 383
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
++ AYIEY T +DGSV+GVTVTR A+L+HC+ALTQAC YTE E +V VLDFK++ GLWH
Sbjct: 384 NNDTAYIEYKTCKDGSVLGVTVTRIALLTHCQALTQACGYTEAETIVNVLDFKKDVGLWH 443
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LTSV+N MH + IPY+LMKVNP SW+Q + +Y+A VA VKSRD+HW L+A +D +DI+
Sbjct: 444 GILTSVMNMMHVISIPYSLMKVNPLSWIQKVCQYKAKVACVKSRDMHWALVAHRDQRDIN 503
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FL+VFQSKGLR + ICPCASS E LTV++RRP
Sbjct: 504 LSSLRMLIVADGANPWSISSCDAFLNVFQSKGLRQEVICPCASSPEALTVAIRRPTDDSN 563
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GRGVLSM GL+YGV+RVD E L+ LT+QD G VMPG IM VK D LC+TDE+
Sbjct: 564 QPPGRGVLSMHGLTYGVIRVDSEEKLSVLTVQDVGLVMPGAIMCSVKPDGIPQLCRTDEI 623
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GE+CV + TG+ Y+GL G++ TF+V P+ + G +S+ + R+
Sbjct: 624 GELCVCAIATGTSYYGLSGMTKNTFEVFPVTSSGAPVSEYPFVRTGLLGFIGPGGLVFVV 683
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGLM V+GR+HNADDI+AT LAVEPMKF+YRGRIAVFS+ VL DERI ++AEQRPD
Sbjct: 684 GKMDGLMVVSGRRHNADDIVATALAVEPMKFVYRGRIAVFSVTVLHDERIVIVAEQRPDS 743
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
+EE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIHLSE K+ FLEG+LHP
Sbjct: 744 TEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHLSETKQLFLEGSLHPC 803
Query: 673 NVLLCPHTCVTNLPKPRE 690
NVL+CPHTCVTNLPKPR+
Sbjct: 804 NVLMCPHTCVTNLPKPRQ 821
|
|
| UNIPROTKB|H9KZD4 DIP2B "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 2160 (765.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 407/682 (59%), Positives = 511/682 (74%)
Query: 15 KVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIXXXXXXXXXXXXEGGVMTPAPGESLV 74
+VS KIQQLLNTLKRPKR PL EF+ DD E+ + EG MTP GE L
Sbjct: 239 RVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEI-VEVPQPDPNQPKPEGRQMTPVKGEPLG 297
Query: 75 VPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPI 134
V P LEAA+QR+G+ K P T LD GK TLTYGKL SRSLK+AYTLL K +
Sbjct: 298 VVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNK-L 356
Query: 135 NRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFL 194
+E LK GDR+ALVYPNNDP+ F+ AFYGC+ A ++PVPIEVPLTR+DAG QQIGFL
Sbjct: 357 GTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFL 416
Query: 195 LGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE--HLAKTPKDWAPQPRLT 252
LGSC I +ALT++ CLKGLPKT GE+V FKGWP+L W VT+ +L+K+PKDW P
Sbjct: 417 LGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAA 476
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312
PAYIEY T ++GSVMGVTV+R AMLSHC+AL+QAC+Y+EGE +V VLDFK++ GLWH
Sbjct: 477 GTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWH 536
Query: 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS 372
+LT+V+N +H + +PY++MK P SW+Q + ++A VA+VK RDLHW ++A +D +D+S
Sbjct: 537 GILTNVMNKLHTISVPYSVMKTCPLSWVQRVHTHKAKVALVKCRDLHWAMMAHRDQRDVS 596
Query: 373 LSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432
LSSLR+L+V DGANPWS+SSCD FLS+FQS GL+P+AICPCA+S E +T+++RRPG G
Sbjct: 597 LSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGA 656
Query: 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492
GR +LSM+GLS+GV+RV+ E+ ++LT+QD G VMPG +M +VK D LCKTDE+
Sbjct: 657 PLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGAPQLCKTDEI 716
Query: 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSXXXXXXXXXXXXXXX 552
GEICV+S G Y+GL GL+ +TF+V PL + G+ + + RS
Sbjct: 717 GEICVSSRAGGMMYYGLAGLTKSTFEVIPLNSAGSPVGDVPFVRSGLLGFVGPGSLVFVV 776
Query: 553 XSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC 612
DGL+TV+GR+HNADDI+AT LAVE +K +YRGRIAVFS+ V DERI V+AEQRPD
Sbjct: 777 GKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDA 836
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672
SEE+SFQWMSRVLQA+DSIHQVG+YCLALVP N LPKTPLGGIH+S+ K+ FLEG+LHP
Sbjct: 837 SEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPC 896
Query: 673 NVLLCPHTCVTNLPKPREIHSG 694
N+L+CPHTCVTNLPKPR+ G
Sbjct: 897 NILMCPHTCVTNLPKPRQKQPG 918
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9W0S9 | DIP2_DROME | No assigned EC number | 0.6865 | 0.4951 | 0.4918 | yes | N/A |
| Q9Y2E4 | DIP2C_HUMAN | No assigned EC number | 0.5988 | 0.4809 | 0.5443 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.2.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1761 | |||
| cd05905 | 556 | cd05905, Dip2, Disco-interacting protein 2 (Dip2) | 0.0 | |
| cd05905 | 556 | cd05905, Dip2, Disco-interacting protein 2 (Dip2) | 0.0 | |
| cd05931 | 547 | cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | 4e-74 | |
| cd05931 | 547 | cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | 3e-65 | |
| cd04433 | 338 | cd04433, AFD_class_I, Adenylate forming domain, Cl | 4e-41 | |
| pfam00501 | 412 | pfam00501, AMP-binding, AMP-binding enzyme | 5e-41 | |
| cd05905 | 556 | cd05905, Dip2, Disco-interacting protein 2 (Dip2) | 2e-37 | |
| cd05906 | 560 | cd05906, A_NRPS_TubE_like, The adenylation domain | 5e-37 | |
| PRK09192 | 579 | PRK09192, PRK09192, acyl-CoA synthetase; Validated | 7e-37 | |
| COG0318 | 534 | COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ | 2e-33 | |
| PRK05691 | 4334 | PRK05691, PRK05691, peptide synthase; Validated | 1e-31 | |
| COG0318 | 534 | COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ | 1e-30 | |
| cd05908 | 499 | cd05908, A_NRPS_MycA_like, The adenylation domain | 7e-28 | |
| pfam00501 | 412 | pfam00501, AMP-binding, AMP-binding enzyme | 6e-26 | |
| PRK05850 | 578 | PRK05850, PRK05850, acyl-CoA synthetase; Validated | 4e-24 | |
| PRK05850 | 578 | PRK05850, PRK05850, acyl-CoA synthetase; Validated | 8e-24 | |
| PRK12476 | 612 | PRK12476, PRK12476, putative fatty-acid--CoA ligas | 8e-23 | |
| PRK07769 | 631 | PRK07769, PRK07769, long-chain-fatty-acid--CoA lig | 2e-22 | |
| PRK05691 | 4334 | PRK05691, PRK05691, peptide synthase; Validated | 3e-22 | |
| cd05906 | 560 | cd05906, A_NRPS_TubE_like, The adenylation domain | 2e-21 | |
| PRK12476 | 612 | PRK12476, PRK12476, putative fatty-acid--CoA ligas | 6e-21 | |
| cd05905 | 556 | cd05905, Dip2, Disco-interacting protein 2 (Dip2) | 1e-20 | |
| PRK07768 | 545 | PRK07768, PRK07768, long-chain-fatty-acid--CoA lig | 3e-20 | |
| PRK07769 | 631 | PRK07769, PRK07769, long-chain-fatty-acid--CoA lig | 1e-18 | |
| cd05908 | 499 | cd05908, A_NRPS_MycA_like, The adenylation domain | 9e-17 | |
| cd05959 | 506 | cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and | 2e-16 | |
| cd05931 | 547 | cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | 1e-15 | |
| cd05911 | 487 | cd05911, Firefly_Luc_like, Firefly luciferase of l | 1e-15 | |
| PRK09192 | 579 | PRK09192, PRK09192, acyl-CoA synthetase; Validated | 5e-15 | |
| cd05911 | 487 | cd05911, Firefly_Luc_like, Firefly luciferase of l | 2e-14 | |
| cd04433 | 338 | cd04433, AFD_class_I, Adenylate forming domain, Cl | 3e-14 | |
| cd05936 | 468 | cd05936, FC-FACS_FadD_like, Prokaryotic long-chain | 7e-14 | |
| PRK07656 | 513 | PRK07656, PRK07656, long-chain-fatty-acid--CoA lig | 6e-13 | |
| cd05905 | 556 | cd05905, Dip2, Disco-interacting protein 2 (Dip2) | 3e-12 | |
| cd12114 | 476 | cd12114, A_NRPS_TlmIV_like, The adenylation domain | 1e-10 | |
| cd05909 | 489 | cd05909, AAS_C, C-terminal domain of the acyl-acyl | 4e-10 | |
| cd05931 | 547 | cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | 5e-10 | |
| COG0318 | 534 | COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ | 7e-10 | |
| cd05931 | 547 | cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | 9e-10 | |
| TIGR01733 | 409 | TIGR01733, AA-adenyl-dom, amino acid adenylation d | 1e-09 | |
| cd05905 | 556 | cd05905, Dip2, Disco-interacting protein 2 (Dip2) | 2e-09 | |
| pfam00501 | 412 | pfam00501, AMP-binding, AMP-binding enzyme | 3e-09 | |
| PRK08316 | 523 | PRK08316, PRK08316, acyl-CoA synthetase; Validated | 3e-09 | |
| PRK05691 | 4334 | PRK05691, PRK05691, peptide synthase; Validated | 4e-09 | |
| PRK05851 | 525 | PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c | 4e-09 | |
| COG0365 | 528 | COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat | 1e-08 | |
| cd05904 | 504 | cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) | 4e-08 | |
| PRK05851 | 525 | PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c | 5e-08 | |
| cd05936 | 468 | cd05936, FC-FACS_FadD_like, Prokaryotic long-chain | 2e-07 | |
| COG1020 | 642 | COG1020, EntF, Non-ribosomal peptide synthetase mo | 4e-07 | |
| TIGR03098 | 517 | TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form | 5e-07 | |
| cd05919 | 436 | cd05919, BCL_like, Benzoate CoA ligase (BCL) and s | 6e-07 | |
| PRK12316 | 5163 | PRK12316, PRK12316, peptide synthase; Provisional | 8e-07 | |
| TIGR02262 | 508 | TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil | 2e-06 | |
| TIGR01733 | 409 | TIGR01733, AA-adenyl-dom, amino acid adenylation d | 3e-06 | |
| cd05914 | 448 | cd05914, FACL_like_3, Uncharacterized subfamily of | 4e-06 | |
| cd05959 | 506 | cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and | 5e-06 | |
| COG0365 | 528 | COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat | 5e-06 | |
| cd05935 | 430 | cd05935, LC_FACS_like, Putative long-chain fatty a | 5e-06 | |
| PRK06187 | 521 | PRK06187, PRK06187, long-chain-fatty-acid--CoA lig | 6e-06 | |
| cd12114 | 476 | cd12114, A_NRPS_TlmIV_like, The adenylation domain | 9e-06 | |
| PRK05691 | 4334 | PRK05691, PRK05691, peptide synthase; Validated | 1e-05 | |
| cd05919 | 436 | cd05919, BCL_like, Benzoate CoA ligase (BCL) and s | 1e-05 | |
| COG1020 | 642 | COG1020, EntF, Non-ribosomal peptide synthetase mo | 2e-05 | |
| PRK12316 | 5163 | PRK12316, PRK12316, peptide synthase; Provisional | 2e-05 | |
| TIGR02262 | 508 | TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil | 2e-05 | |
| cd05910 | 455 | cd05910, FACL_like_1, Uncharacterized subfamily of | 2e-05 | |
| cd05910 | 455 | cd05910, FACL_like_1, Uncharacterized subfamily of | 2e-05 | |
| cd05918 | 447 | cd05918, A_NRPS_SidN3_like, The adenylation (A) do | 2e-05 | |
| cd05959 | 506 | cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and | 3e-05 | |
| PRK12467 | 3956 | PRK12467, PRK12467, peptide synthase; Provisional | 3e-05 | |
| COG0318 | 534 | COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ | 5e-05 | |
| PRK05850 | 578 | PRK05850, PRK05850, acyl-CoA synthetase; Validated | 7e-05 | |
| PRK12316 | 5163 | PRK12316, PRK12316, peptide synthase; Provisional | 8e-05 | |
| cd05912 | 407 | cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase | 8e-05 | |
| cd05919 | 436 | cd05919, BCL_like, Benzoate CoA ligase (BCL) and s | 9e-05 | |
| cd12114 | 476 | cd12114, A_NRPS_TlmIV_like, The adenylation domain | 1e-04 | |
| cd05935 | 430 | cd05935, LC_FACS_like, Putative long-chain fatty a | 1e-04 | |
| cd05935 | 430 | cd05935, LC_FACS_like, Putative long-chain fatty a | 1e-04 | |
| cd05903 | 437 | cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li | 1e-04 | |
| pfam00501 | 412 | pfam00501, AMP-binding, AMP-binding enzyme | 2e-04 | |
| cd05930 | 445 | cd05930, A_NRPS, The adenylation domain of nonribo | 2e-04 | |
| cd05917 | 347 | cd05917, FACL_like_2, Uncharacterized subfamily of | 2e-04 | |
| cd05906 | 560 | cd05906, A_NRPS_TubE_like, The adenylation domain | 3e-04 | |
| COG0318 | 534 | COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ | 3e-04 | |
| cd05917 | 347 | cd05917, FACL_like_2, Uncharacterized subfamily of | 3e-04 | |
| cd05934 | 421 | cd05934, FACL_DitJ_like, Uncharacterized subfamily | 3e-04 | |
| cd05934 | 421 | cd05934, FACL_DitJ_like, Uncharacterized subfamily | 3e-04 | |
| COG1022 | 613 | COG1022, FAA1, Long-chain acyl-CoA synthetases (AM | 3e-04 | |
| COG1022 | 613 | COG1022, FAA1, Long-chain acyl-CoA synthetases (AM | 3e-04 | |
| cd05931 | 547 | cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | 4e-04 | |
| COG0365 | 528 | COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat | 4e-04 | |
| cd05930 | 445 | cd05930, A_NRPS, The adenylation domain of nonribo | 5e-04 | |
| PRK09274 | 552 | PRK09274, PRK09274, peptide synthase; Provisional | 5e-04 | |
| cd05936 | 468 | cd05936, FC-FACS_FadD_like, Prokaryotic long-chain | 6e-04 | |
| PRK09274 | 552 | PRK09274, PRK09274, peptide synthase; Provisional | 7e-04 | |
| PRK12316 | 5163 | PRK12316, PRK12316, peptide synthase; Provisional | 8e-04 | |
| cd05934 | 421 | cd05934, FACL_DitJ_like, Uncharacterized subfamily | 8e-04 | |
| cd05922 | 350 | cd05922, FACL_like_6, Uncharacterized subfamily of | 8e-04 | |
| TIGR01733 | 409 | TIGR01733, AA-adenyl-dom, amino acid adenylation d | 0.001 | |
| PRK08751 | 560 | PRK08751, PRK08751, putative long-chain fatty acyl | 0.001 | |
| PRK06188 | 524 | PRK06188, PRK06188, acyl-CoA synthetase; Validated | 0.001 | |
| cd12116 | 438 | cd12116, A_NRPS_Ta1_like, The adenylation domain o | 0.001 | |
| PRK12316 | 5163 | PRK12316, PRK12316, peptide synthase; Provisional | 0.002 | |
| cd05918 | 447 | cd05918, A_NRPS_SidN3_like, The adenylation (A) do | 0.002 | |
| cd05941 | 430 | cd05941, MCS, Malonyl-CoA synthetase (MCS) | 0.002 | |
| cd05941 | 430 | cd05941, MCS, Malonyl-CoA synthetase (MCS) | 0.002 | |
| cd05941 | 430 | cd05941, MCS, Malonyl-CoA synthetase (MCS) | 0.002 | |
| PRK05691 | 4334 | PRK05691, PRK05691, peptide synthase; Validated | 0.003 | |
| PRK07656 | 513 | PRK07656, PRK07656, long-chain-fatty-acid--CoA lig | 0.003 | |
| PRK07656 | 513 | PRK07656, PRK07656, long-chain-fatty-acid--CoA lig | 0.003 | |
| PRK12467 | 3956 | PRK12467, PRK12467, peptide synthase; Provisional | 0.003 | |
| cd05912 | 407 | cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase | 0.003 | |
| TIGR01923 | 436 | TIGR01923, menE, O-succinylbenzoate-CoA ligase | 0.003 | |
| PRK09192 | 579 | PRK09192, PRK09192, acyl-CoA synthetase; Validated | 0.004 | |
| PRK05850 | 578 | PRK05850, PRK05850, acyl-CoA synthetase; Validated | 0.004 | |
| PRK07768 | 545 | PRK07768, PRK07768, long-chain-fatty-acid--CoA lig | 0.004 | |
| cd05912 | 407 | cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase | 0.004 |
| >gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) | Back alignment and domain information |
|---|
Score = 715 bits (1848), Expect = 0.0
Identities = 319/582 (54%), Positives = 393/582 (67%), Gaps = 44/582 (7%)
Query: 104 DPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCA 163
D NGK TLTYGKL SR+ K+AY LL K +K GDR+ LVYP DP +F+ A
Sbjct: 1 DGNGKPLYTLTYGKLWSRAAKIAYALLKK-------LGIKPGDRVVLVYP--DPEDFIAA 51
Query: 164 FYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGS----CDIQVALTSDACLKGLPKTAAG 219
FYGC++AG++PVP+E PL+R GSQQ+G LLGS C + VALTS+ACLKGL G
Sbjct: 52 FYGCLYAGLIPVPVEPPLSRA--GSQQVGALLGSIKHYCGVAVALTSEACLKGLRSKTTG 109
Query: 220 EVVAFKGWPKLTWFVTEH--LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRA 277
E++ FKGWP+L WFVTE L K KDW P + AYIEY T ++GSVMGVTVT
Sbjct: 110 EILKFKGWPRLVWFVTEIKTLKKPIKDWNPHLPPANLDTAYIEYKTSKEGSVMGVTVTHQ 169
Query: 278 AMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPA 337
A+L+HC+AL QAC YTEG +V VLDFK+ G WH LTSV+NGMH + IP ALMK NP
Sbjct: 170 ALLTHCQALKQACQYTEGRTIVNVLDFKKGVGFWHGCLTSVMNGMHTILIPPALMKNNPL 229
Query: 338 SWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFL 397
W Q+I+KY+ +VKSRDLHW L A +D KDI+LS LR+L+V DGA PWSL+SC FL
Sbjct: 230 LWFQIISKYKIKDTLVKSRDLHWALNAHRDQKDINLSCLRMLIVADGARPWSLASCQAFL 289
Query: 398 SVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVN--ATGRGVLSMSGLSYGVVRVDQE 455
+VFQSKG + PCASS+E TV+ RR G G + GRGVL M+ L +GVVRVD E
Sbjct: 290 NVFQSKG-----LSPCASSTEASTVANRRIGTRGYSGPIPGRGVLDMAALRHGVVRVDSE 344
Query: 456 NSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNT 515
+ +SL LQD G VMPG M +V D+P LC+TDE+GEI V S+ + Y+GL G++
Sbjct: 345 DKPSSLPLQDSGMVMPGAQMCIVNPDTPP-LCRTDEIGEIWVNSSANATSYYGLTGMTKN 403
Query: 516 TFKVTPLLADGTALSQDTYTRSGLLGFLGPG----------GLVFVCGSRDGLMTVTGRK 565
TF+V P + + ++ Y R+GLLGF+GP GL+FV GS D + V+G +
Sbjct: 404 TFEVFPNSS-SDGIGENPYVRTGLLGFVGPTSHSMGPVVDMGLLFVVGSIDETLEVSGLR 462
Query: 566 HNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDCSEEESFQWMSRVL 625
HN DDI ATVL V PM IYRGRIAVFS+ ER+ V+AEQR SEEESFQW+ RVL
Sbjct: 463 HNPDDIEATVLRVHPM--IYRGRIAVFSVT----ERVVVVAEQR--GSEEESFQWVPRVL 514
Query: 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667
A+ S HQV +Y +ALVPP LPKTPLG SE + FLEG
Sbjct: 515 NAILSEHQVIVYVVALVPPGTLPKTPLGEKQRSETRASFLEG 556
|
Dip2 proteins show sequence similarity to other members of the adenylate forming enzyme family, including insect luciferase, acetyl CoA ligases and the adenylation domain of nonribosomal peptide synthetases (NRPS). However, its function may have diverged from other members of the superfamily. In mouse embryo, Dip2 homolog A plays an important role in the development of both vertebrate and invertebrate nervous systems. Dip2A appears to regulate cell growth and the arrangement of cells in organs. Biochemically, Dip2A functions as a receptor of FSTL1, an extracellular glycoprotein, and may play a role as a cardiovascular protective agent. Length = 556 |
| >gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) | Back alignment and domain information |
|---|
Score = 601 bits (1552), Expect = 0.0
Identities = 190/564 (33%), Positives = 282/564 (50%), Gaps = 29/564 (5%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT +L RA ++ LL++ I GD V L++P D I AFYGCLY G +PV + PP
Sbjct: 10 LTYGKLWSRAAKIAYALLKKLGIKPGDRVVLVYPDPEDFIAAFYGCLYAGLIPVPVEPPL 69
Query: 1259 ----PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDM 1314
Q + L +++ + L+++ +K L+SK ++ K WP ++
Sbjct: 70 SRAGSQQVGALLGSIK---HYCGVAVALTSEACLKGLRSKTTGEILKFKGWPRLVWFVTE 126
Query: 1315 PKK-----KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYP 1369
K K + P AY+++ S G + G+ ++H A+ + C+++K AC+
Sbjct: 127 IKTLKKPIKDWNPHLPPANLDTAYIEYKTSKEGSVMGVTVTHQALLTHCQALKQACQYTE 186
Query: 1370 SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCS 1429
R I LD G+GF L+SV +G H+ILIPP+ ++ NP LW +S+Y+++DT
Sbjct: 187 GRTIVNVLDFKKGVGFWHGCLTSVMNGMHTILIPPALMKNNPLLWFQIISKYKIKDTLVK 246
Query: 1430 YGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP-RIHLTSAFSKLFSALGLSPR 1488
+ ++I L C+R +V RP + AF +F + GLSP
Sbjct: 247 SRDLHWALNA------HRDQKDINLSCLRMLIVADGARPWSLASCQAFLNVFQSKGLSPC 300
Query: 1489 AVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLP 1548
A ST N I +G S P P +D+ ALR+ V + P SL L +SG ++P
Sbjct: 301 ASSTEASTVANRRIGTRGYSGPIPGRGVLDMAALRHGVVRVDSEDKPSSLPLQDSGMVMP 360
Query: 1549 GVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGEL 1608
G ++ I NP+T C +GEIWV S NA+ Y+ L G + F G
Sbjct: 361 GAQMCIVNPDTPPLCRTDEIGEIWVNSSANATSYYGLTGMTKNTFEVFPNSSSDGIGENP 420
Query: 1609 YARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSV 1668
Y RTG LGF+ TS + +FVVG++DET+ + G+R++P DIE +V
Sbjct: 421 YVRTGLLGFVGPTSHSMGPVVD--------MGLLFVVGSIDETLEVSGLRHNPDDIEATV 472
Query: 1669 MRAHKKI--AECAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVD 1726
+R H I AVF+ T +VVV E G+E E+ VP V NA+L EH +IV V +V
Sbjct: 473 LRVHPMIYRGRIAVFSVTERVVVVAEQRGSEEESFQWVPRVLNAILSEHQVIVYVVALVP 532
Query: 1727 PGVVPINSRGEKQRMHLRDGFLAD 1750
PG +P GEKQR R FL
Sbjct: 533 PGTLPKTPLGEKQRSETRASFLEG 556
|
Dip2 proteins show sequence similarity to other members of the adenylate forming enzyme family, including insect luciferase, acetyl CoA ligases and the adenylation domain of nonribosomal peptide synthetases (NRPS). However, its function may have diverged from other members of the superfamily. In mouse embryo, Dip2 homolog A plays an important role in the development of both vertebrate and invertebrate nervous systems. Dip2A appears to regulate cell growth and the arrangement of cells in organs. Biochemically, Dip2A functions as a receptor of FSTL1, an extracellular glycoprotein, and may play a role as a cardiovascular protective agent. Length = 556 |
| >gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | Back alignment and domain information |
|---|
Score = 257 bits (660), Expect = 4e-74
Identities = 154/578 (26%), Positives = 245/578 (42%), Gaps = 63/578 (10%)
Query: 1190 VDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGA 1249
D + LT ++L +RA + A L GD V L+ PPG+D + AF+GCLY GA
Sbjct: 15 FDDDDEEETLTYAELDRRARAIAARLQALGA--PGDRVLLLAPPGLDFVAAFFGCLYAGA 72
Query: 1250 VPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTIL 1309
+ V PP L L + I+ + + VL+ V+ L++ A+ +
Sbjct: 73 IAVPAPPPRR--LGRHLARLAAILADAGARAVLTTSAVLAALRAALAAPAALLLLLIAAD 130
Query: 1310 DTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYP 1369
D + P + +A+L ++ +TG G+ ++H + + R++ A L P
Sbjct: 131 DLAALAAA--DWRPPPPDPDDIAFLQYTSGSTGAPKGVMVTHGNLLANLRAIARAFGLDP 188
Query: 1370 SRHIALCLDPY--CGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTF 1427
L Y GL L L +Y+G +L+ P P WL A+S+YR +
Sbjct: 189 DDVGVSWLPLYHDMGLIGGL--LQPLYAGFPVVLMSPLAFLRRPLRWLEAISRYRATVSG 246
Query: 1428 C---SYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTS--AFSKLFSA 1482
+Y +LC + + + + L R AE + + F++ F+
Sbjct: 247 APNFAY---DLCVR----RVRDEQLAGLDLSSWRVAFNGAE---PVRADTLERFAERFAP 296
Query: 1483 LGLSPRAVSTSFG---CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLC 1539
G P A +G + ++ G P + VD AL ++ +
Sbjct: 297 AGFRPEAFLPCYGLAEATLAVSG---GPPGAGPVVLRVDRDALARGGAAVAAADGAAARE 353
Query: 1540 LLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSAR 1599
L+ G+ LPG +V I +PET+ D +GEIWV+ P A+GY+ A+ F AR
Sbjct: 354 LVSCGRPLPGHEVRIVDPETRRPLPDGEVGEIWVRGPSVAAGYW---NRPEATAETFGAR 410
Query: 1600 LVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRY 1659
L T G + RTG LGFL ++V G L + I++RG +
Sbjct: 411 LATDEGG--WLRTGDLGFLHD-------------------GELYVTGRLKDLIIIRGRNH 449
Query: 1660 HPIDIENSVMRAHKKIAECAVFTWTNL------LVVVVELDGNES--EALDLVPLVTNAV 1711
+P DIE +V RAH + A ++ LVVV E+ + L + AV
Sbjct: 450 YPQDIEATVERAHPALRPGAAAAFSVDGDGEERLVVVAEVRRRGLPADLAALAEAIRAAV 509
Query: 1712 LEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749
EH + V+V PG +P S G+ QR R+ +LA
Sbjct: 510 AREHGVAPADVVLVRPGTLPKTSSGKIQRRACRELYLA 547
|
FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin. Length = 547 |
| >gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 3e-65
Identities = 155/565 (27%), Positives = 234/565 (41%), Gaps = 50/565 (8%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
TLTY +L R+ +A L + GDR+ L+ P ++F+ AF+GC++AG
Sbjct: 23 TLTYAELDRRARAIAARLQ---------ALGAPGDRVLLLAPPG--LDFVAAFFGCLYAG 71
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLT 231
+ VP P R ++ +L + LT+ A L L A
Sbjct: 72 AIAVPAPPP-RRLGRHLARLAAILADAGARAVLTTSAVLAALRAALAAPAALLLLL---- 126
Query: 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH 291
+ A DW P P D A+++YT+ G+ GV VT +L++ RA+ +A
Sbjct: 127 IAADDLAALAAADWRP-PPPDPDDIAFLQYTSGSTGAPKGVMVTHGNLLANLRAIARAFG 185
Query: 292 YTEGENMVCVL----DFKRETGLWHSVLTSVLNGMHAVYI-PYALMKVNPASWMQMITKY 346
+ V L D GL +L + G V + P A ++ P W++ I++Y
Sbjct: 186 LDPDDVGVSWLPLYHDM----GLIGGLLQPLYAGFPVVLMSPLAFLR-RPLRWLEAISRY 240
Query: 347 RASVAVVKSRDLHWGLLATK----DHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQS 402
RA+V+ + + L + + LSS R+ GA P + ++F F
Sbjct: 241 RATVSGAP--NFAYDLCVRRVRDEQLAGLDLSSWRVAFN--GAEPVRADTLERFAERFAP 296
Query: 403 KGLRPDAICPCASSSEC-LTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSL 461
G RP+A PC +E L VS PG V + L+ G V + +
Sbjct: 297 AGFRPEAFLPCYGLAEATLAVSGGPPGAGPVVLR----VDRDALARGGAAVAAADGAAAR 352
Query: 462 TLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTP 521
L CG+ +PG + +V ++ EVGEI V + YW P + TF
Sbjct: 353 ELVSCGRPLPGHEVRIVDPET-RRPLPDGEVGEIWVRGPSVAAGYWNRPEATAETF---- 407
Query: 522 LLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPM 581
A + + R+G LGFL G L +V G L+ + GR H DI ATV P
Sbjct: 408 --GARLATDEGGWLRTGDLGFLHDGEL-YVTGRLKDLIIIRGRNHYPQDIEATVERAHP- 463
Query: 582 KFIYRGRIAVFSIRVLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLAL 641
+ G A FS+ +ER+ V+AE R + + AV H V + L
Sbjct: 464 -ALRPGAAAAFSVDGDGEERLVVVAEVRRRGLPADLAALAEAIRAAVAREHGVAPADVVL 522
Query: 642 VPPNYLPKTPLGGIHLSECKRRFLE 666
V P LPKT G I C+ +L
Sbjct: 523 VRPGTLPKTSSGKIQRRACRELYLA 547
|
FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin. Length = 547 |
| >gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 4e-41
Identities = 95/405 (23%), Positives = 144/405 (35%), Gaps = 72/405 (17%)
Query: 256 PAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVL 315
PA+I YT+ G GV ++ +L++ +AL QA TEG+ ++ VL G +L
Sbjct: 2 PAFILYTSGTTGKPKGVVLSHRNLLANAQALAQAIGLTEGDVLLSVLPLFHVVGGGSGLL 61
Query: 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSS 375
++L G V P S++++I +YR +V L + + LSS
Sbjct: 62 GALLAGGTVVLYEGFPF---PLSFLELIEQYRVTVLFGVPTLYDA-LAKAAEDRGYDLSS 117
Query: 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNAT 435
LRLL+ G P S ++F
Sbjct: 118 LRLLISGGE--PLSPELLERFEERP----------------------------------- 140
Query: 436 GRGVLSMSGLSYGVVRVDQENSLTSLTL-QDCGQVMPGCIMTVVKMDSPSYLCKTDEVGE 494
G +L GL+ V V N + L G+ +PG + VV D EVGE
Sbjct: 141 GAPILEGYGLTETSV-VTSTNPDSELKKPGTVGRPVPGVEVRVV--DEEGKPLPPGEVGE 197
Query: 495 ICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGS 554
+ V YW P A ++D + R+G LG+L G +++ G
Sbjct: 198 LVVRGPWVMKGYWNNP------------PETTAAATEDGWYRTGDLGYLDEEGYLYITGR 245
Query: 555 RDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRP--D 611
L+ V G ++ + +L + AV + R ERI RP D
Sbjct: 246 SKDLIKVGGENVYPAEVESVLLQHPAVA-----EAAVVGVPDEDRGERIVAFVVLRPGAD 300
Query: 612 CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIH 656
EE + L + V LPKT G I
Sbjct: 301 ALAEELKAHLRERL---APYKVPRVIE--FVDE--LPKTASGKID 338
|
This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain. Length = 338 |
| >gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 5e-41
Identities = 102/492 (20%), Positives = 179/492 (36%), Gaps = 91/492 (18%)
Query: 1200 TCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259
T +L +RA R+ A L + GD VA++ P + + A L GA V + P P
Sbjct: 1 TYRELDERANRLAAALRALG-VGPGDRVAILLPNSPEWVVAILAVLKAGAAYVPLDPSLP 59
Query: 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQN--------VIKLLKSKEASNVVDIKSWPTILDT 1311
+ I++ S++ +++++ ++KLL V D +LD
Sbjct: 60 A------ERLAYILEDSEAKVLITDDELLPKLLEVLLKLLVLLALIIVGDDGEGLDLLDD 113
Query: 1312 DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSR 1371
+ + + LAY+ ++ TTG G+ ++H + +L + L P
Sbjct: 114 ELLAGASAEPPAPPVDPDDLAYIIYTSGTTGKPKGVMLTHRNLLALAAGLAERFGLTPGD 173
Query: 1372 HIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYG 1431
+ L L P G + + +G +L+P ++PA L + +Y+V +
Sbjct: 174 RVLLLL-PLHFDGSVWEIFGPLLAGGTLVLVPKF--TLDPARLLDLIEKYKVTVLYGVPT 230
Query: 1432 VMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVS 1491
++ L K + + L +R + E P +L G P +
Sbjct: 231 LLRLLLK-------APEEKKYDLSSLRLVLSGGEPLPP----ELLRRLRERFGGVP--LV 277
Query: 1492 TSFG---CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLP 1548
+G V L G +P + G+ LP
Sbjct: 278 NGYGPTETTVVATANLPGDPEVKPGSI----------------------------GRPLP 309
Query: 1549 GVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGEL 1608
GV+V + + E + +GE+ ++ P A GY D A++F G
Sbjct: 310 GVEVKVLDEEGE-PVPPGEVGELCIRGPGVARGY---LNDPELTAERFVED------GWG 359
Query: 1609 YARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSV 1668
RTG LG G + ++G D+ + +RG R P +IE V
Sbjct: 360 MYRTGDLGRWD------------EDGY------LEILGRKDDQVKIRGERIEPGEIEA-V 400
Query: 1669 MRAHKKIAECAV 1680
+ H +AE AV
Sbjct: 401 LLEHPGVAEAAV 412
|
Length = 412 |
| >gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 2e-37
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 1005 HDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKI--AECAVFTWTNLLVVVVELDGN 1062
+FVVG++DET+ + G+R++P DIE +V+R H I AVF+ T +VVV E G+
Sbjct: 443 MGLLFVVGSIDETLEVSGLRHNPDDIEATVLRVHPMIYRGRIAVFSVTERVVVVAEQRGS 502
Query: 1063 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1116
E E+ VP V NA+L EH +IV V +V PG +P GEKQR R FL
Sbjct: 503 EEESFQWVPRVLNAILSEHQVIVYVVALVPPGTLPKTPLGEKQRSETRASFLEG 556
|
Dip2 proteins show sequence similarity to other members of the adenylate forming enzyme family, including insect luciferase, acetyl CoA ligases and the adenylation domain of nonribosomal peptide synthetases (NRPS). However, its function may have diverged from other members of the superfamily. In mouse embryo, Dip2 homolog A plays an important role in the development of both vertebrate and invertebrate nervous systems. Dip2A appears to regulate cell growth and the arrangement of cells in organs. Biochemically, Dip2A functions as a receptor of FSTL1, an extracellular glycoprotein, and may play a role as a cardiovascular protective agent. Length = 556 |
| >gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 5e-37
Identities = 146/625 (23%), Positives = 233/625 (37%), Gaps = 94/625 (15%)
Query: 72 SLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLT 131
L +P G PR LE A+QR + T +D +G +Y +LL + ++ L
Sbjct: 1 PLPLPPGAPRTLEEALQR-AAEHAPGRGITYIDADGS-EEFQSYAELLEEAERILAGLR- 57
Query: 132 KPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQ-- 189
LK GD + L N+ +F+ AF+ C+ G VPVP+ VP T + +
Sbjct: 58 -------ALGLKPGDSVILQLERNE--DFVTAFWACVLGGFVPVPVAVPPTYDEPNAAVA 108
Query: 190 ---QIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWA 246
I LLGS V LT A + L G L E L P D A
Sbjct: 109 KLRNIWELLGSP---VILTDAALVAALAGLRTRA-----GLEALRVLAIEELRSAPPD-A 159
Query: 247 PQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKR 306
P D PA + T+ G V +T +L+ Q +T + + +
Sbjct: 160 PLHPARPDDPALLLLTSGSTGVPKCVVLTHRNILARSAGTVQVNGFTPDDVSLNWMPLDH 219
Query: 307 ETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASV------AVVKSRDLHW 360
G+ L V G +++P + +P W+ +I +YR ++ A D
Sbjct: 220 VGGIVMLHLRDVYLGCQQIHVPTDYILADPLRWLDLIDRYRVTITWAPNFAFALLND--- 276
Query: 361 GLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPC---ASSS 417
L + + LSSLR ++ A + +FL + GL DAI P + +
Sbjct: 277 -ALERIEDRSWDLSSLRYIINAGEAV--VAKTIRRFLELLAPYGLPADAIRPAFGMSETC 333
Query: 418 ECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTV 477
+T S R L + + + G+ +PG + +
Sbjct: 334 SGVTYS-RGFRTGPDTGGVLVDSLTGPLRFAAADHPEAVTFVE-----LGRPIPGVAIRI 387
Query: 478 VKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRS 537
V D L EVG + V S Y+ P + F DG + R+
Sbjct: 388 VDEDGA--LLPEGEVGRLQVRGPTVTSGYYRNPEANAEAF-----TEDG-------WFRT 433
Query: 538 GLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDII---ATVL------AVEPMKFIYRGR 588
G LGFL DG +T+TGR+ D II AVE + +
Sbjct: 434 GDLGFL-----------HDGRLTITGRE--KDMIIINGVNYYNHEIEAAVEQVPGVEPSF 480
Query: 589 IAVFSIRVLRD--ERICVIAEQRPDCSEEESFQWMSRVLQAVDS--IHQVGLYCLALVP- 643
A ++R + + V R D + ++ +L+A+ + ++G+ ++P
Sbjct: 481 TAACAVRDAGSGTDELAVFFVPRYDLDDR-----LAALLRAIRTHVARKIGIAPAYVIPL 535
Query: 644 -PNYLPKTPLGGIHLSECKRRFLEG 667
PKT LG I ++ ++RF G
Sbjct: 536 AKEDFPKTSLGKIQRAQLRKRFEAG 560
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPSs that synthesize toxins and antitumor agents; for example, TubE for Tubulysine, CrpA for cryptophycin, TdiA for terrequinone A, KtzG for kutzneride, and Vlm1/Vlm2 for Valinomycin. Nonribosomal peptide synthetases are large multifunctional enzymes which synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 560 |
| >gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 7e-37
Identities = 147/582 (25%), Positives = 229/582 (39%), Gaps = 59/582 (10%)
Query: 104 DPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCA 163
D G+L L Y L +R+ A LL LK GDR+AL+ D +F+ A
Sbjct: 41 DRRGQLEEALPYQTLRARAEAGARRLLA--------LGLKPGDRVALI-AETDG-DFVEA 90
Query: 164 FYGCIFAGIVPVPIEVP--LTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEV 221
F+ C +AG+VPVP+ +P R++ Q+ +L S +T D L A
Sbjct: 91 FFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDE-LLPWVNEATH-- 147
Query: 222 VAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSV---MGVTVTRAA 278
L+ P+ PR T D AY++Y++ GS GV +T A
Sbjct: 148 -GNPLLHVLSH---AWFKALPEADVALPRPTPDDIAYLQYSS---GSTRFPRGVIITHRA 200
Query: 279 MLSHCRALTQ-ACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPA 337
++++ RA++ G+ V L F + GL +LT V + Y+P P
Sbjct: 201 LMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPL 260
Query: 338 SWMQMITKYRASVAVVKS--RDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQ 395
W+ +I++ R +++ +L + +KD ++ LS R + G GA+ Q
Sbjct: 261 QWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWR--VAGIGADMIRPDVLHQ 318
Query: 396 FLSVFQSKGLRPDAICPCASSSEC-LTVSVRRPGR-AGVNATGRGVLSMSGLSYGVVRVD 453
F F G A P +E L VS G V R L G +
Sbjct: 319 FAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAP---- 374
Query: 454 QENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLS 513
+ T +CG+ +PG + + + VG ICV S Y+
Sbjct: 375 GAETRRVRTFVNCGKALPGHEIEIR--NEAGMPLPERVVGHICVRGPSLMSGYFRDE--- 429
Query: 514 NTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIA 573
L+ D + +G LG+L G L + G L+ + GR DI
Sbjct: 430 ----------ESQDVLAADGWLDTGDLGYLLDGYLY-ITGRAKDLIIINGRNIWPQDI-- 476
Query: 574 TVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQ 633
E + G A FSI E+I ++ + R EE Q + + V S
Sbjct: 477 -EWIAEQEPELRSGDAAAFSIAQENGEKIVLLVQCRIS-DEERRGQLIHALAALVRSEF- 533
Query: 634 VGLYCL-ALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPANV 674
G+ LVPP+ LP+T G + ++ K+R+L G +V
Sbjct: 534 -GVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSGAFASLDV 574
|
Length = 579 |
| >gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 2e-33
Identities = 127/618 (20%), Positives = 206/618 (33%), Gaps = 97/618 (15%)
Query: 67 PAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVA 126
+ L LE A +R A + G LTY +L R+ ++A
Sbjct: 1 ANRLMRMTAELTLASLLERAARRNPDRP-----ALIFLGRGG---RLTYRELDRRANRLA 52
Query: 127 YTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDA 186
L +K GDR+A++ PN+ FL AF + AG V VP+ LT R
Sbjct: 53 AALQ--------ALGVKPGDRVAILLPNS--PEFLIAFLAALRAGAVAVPLNPRLTPR-- 100
Query: 187 GSQQIGFLLGSCDIQVALTSDACLKGL----PKTAAGEVVAFKGWPKLTWFVTEH--LAK 240
++ ++L +V +TS L VV G +T A+
Sbjct: 101 ---ELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAE 157
Query: 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC--HYTEGENM 298
P A + D A++ YT+ G GV +T +L++ + A T + +
Sbjct: 158 GPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVV 217
Query: 299 VCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDL 358
+ L GL +L +L G V + W+ K V
Sbjct: 218 LSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVP---TF 274
Query: 359 HWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSE 418
LL + D LSS L++ G P ++F F P AI +E
Sbjct: 275 LRELLDNPEKDDDDLSSSLRLVLS-GGAPLPPELLERFEERFG-----PIAILEGYGLTE 328
Query: 419 CLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478
V P + G G+ +PG + +V
Sbjct: 329 TSPVVTINPPDDLLAKPGSV----------------------------GRPLPGVEVRIV 360
Query: 479 KMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSG 538
D EVGEI V YW P + F +D + R+G
Sbjct: 361 --DPDGGEVLPGEVGEIWVRGPNVMKGYWNRPEATAEAFD------------EDGWLRTG 406
Query: 539 LLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDI---IATVLAVEPMKFIYRGRIAVFSIR 595
LG++ G +++ G L+ G ++I +A AV AV +
Sbjct: 407 DLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAV--------AEAAVVGVP 458
Query: 596 VLR-DERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGG 654
R ER+ + +P E + + + L+ ++++V +V + LP+T G
Sbjct: 459 DERWGERVVAVVVLKPGGDAELTAEELRAFLRKRLALYKVPRI---VVFVDELPRTASGK 515
Query: 655 IHLSECKRRFLEGNLHPA 672
I + +
Sbjct: 516 IDRRALREEYRAEPRLDL 533
|
Length = 534 |
| >gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 1e-31
Identities = 148/588 (25%), Positives = 233/588 (39%), Gaps = 77/588 (13%)
Query: 1191 DTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAV 1250
D +L+ L RA + A L RA GD L+FP G D + AF+GCLY G +
Sbjct: 33 DDPGEGVVLSYRDLDLRARTIAAALQARASF--GDRAVLLFPSGPDYVAAFFGCLYAGVI 90
Query: 1251 PVTIRPPHP--QNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTI 1308
V PP ++ Q L + I+ ++ L+L+ ++ L E + P +
Sbjct: 91 AVPAYPPESARRHHQERLLS---IIADAEPRLLLTVADLRDSLLQMEELAAANA---PEL 144
Query: 1309 LDTDDMPKKKLAALYRAPT--AEMLAYLDFSVSTTGMLAGIKMSHA---AVTSLCRSMKL 1363
L D + LA ++ P + +A+L ++ +T + G+++SH A L R
Sbjct: 145 LCVDTLDPA-LAEAWQEPALQPDDIAFLQYTSGSTALPKGVQVSHGNLVANEQLIRH-GF 202
Query: 1364 ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 1423
+L P I L Y +G +L ++SG +L+ P+ P WL A+S+Y
Sbjct: 203 GIDLNPDDVIVSWLPLYHDMGLIGGLLQPIFSGVPCVLMSPAYFLERPLRWLEAISEYGG 262
Query: 1424 RDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP-RIHLTSAFSKLFSA 1482
+ LC++ +S S + L R V + P R F++ F+A
Sbjct: 263 TISGGPDFAYRLCSERVSESALE------RLDLSRWRVAYSGSEPIRQDSLERFAEKFAA 316
Query: 1483 LGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLE 1542
G P + S+G G + +D AL +R GS L+
Sbjct: 317 CGFDPDSFFASYGLAEATLFVSGGRRGQGIPALELDAEALARNRAEPGT-GSV----LMS 371
Query: 1543 SGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT 1602
G+ PG V+I +P++ GD+ +GEIW P A GY+ + SA+
Sbjct: 372 CGRSQPGHAVLIVDPQSLEVLGDNRVGEIWASGPSIAHGYWR--------NPEASAKTFV 423
Query: 1603 GNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPI 1662
+ G + RTG LGFLR +FV G L + +++RG +P
Sbjct: 424 EHDGRTWLRTGDLGFLR-------------------DGELFVTGRLKDMLIVRGHNLYPQ 464
Query: 1663 DIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNE---------------SEALDLVPLV 1707
DIE +V R E V + V G E L+ +
Sbjct: 465 DIEKTVER------EVEVVRKGRVAAFAVNHQGEEGIGIAAEISRSVQKILPPQALIKSI 518
Query: 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPI 1755
AV E V ++++PG +P S G+ QR R LD
Sbjct: 519 RQAVAEACQEAPSVVLLLNPGALPKTSSGKLQRSACRLRLADGSLDSY 566
|
Length = 4334 |
| >gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 1e-30
Identities = 123/575 (21%), Positives = 210/575 (36%), Gaps = 104/575 (18%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT +L +RA R+ A L + GD VA++ P + + AF L GAV V + P
Sbjct: 39 LTYRELDRRANRLAAALQALG-VKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLNPR- 96
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
T + I++ + + +++++ LL+ A + + + D DD
Sbjct: 97 -----LTPRELAYILNDAGAKVLITSAEFAALLE-AVAEALPVVLVVLLVGDADDRLPIT 150
Query: 1319 LAAL----------YRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELY 1368
L AL R + LA+L ++ TTG+ G+ ++H + + + A
Sbjct: 151 LEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG 210
Query: 1369 PSRH--IALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDT 1426
+ + L + G + +L+ + G +L+ P + LWL + +Y+V
Sbjct: 211 LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWL--IEKYKVT-- 266
Query: 1427 FCSYGV----MELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSA 1482
GV EL K + +R + L F + F
Sbjct: 267 -VLSGVPTFLRELLDN-------PEKDDDDLSSSLRLV-LSGGAPLPPELLERFEERF-- 315
Query: 1483 LGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLE 1542
P A+ +G +SP + D + V
Sbjct: 316 ---GPIAILEGYG---------LTETSPVVTINPPDDLLAKPGSV--------------- 348
Query: 1543 SGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT 1602
G+ LPGV+V I +P+ GEIWV+ P+ GY + A+ F
Sbjct: 349 -GRPLPGVEVRIVDPDGGEVLPGEV-GEIWVRGPNVMKGY---WNRPEATAEAF------ 397
Query: 1603 GNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPI 1662
+ + RTG LG++ G +++VG L + I+ G +P
Sbjct: 398 --DEDGWLRTGDLGYV---DEDGY---------------LYIVGRLKDLIISGGENIYPE 437
Query: 1663 DIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHL 1717
+IE V+ H +AE AV W +V VV L L L + + L
Sbjct: 438 EIEA-VLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAELTAEEL-RAFLRKRLAL 495
Query: 1718 IVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 1752
+VV +P + G+ R LR+ + A+
Sbjct: 496 YKVPRIVVFVDELPRTASGKIDRRALREEYRAEPR 530
|
Length = 534 |
| >gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 7e-28
Identities = 131/590 (22%), Positives = 227/590 (38%), Gaps = 120/590 (20%)
Query: 101 TVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160
T ++ + K ++Y +L +R+LKV L + +K GD +V+ D +F
Sbjct: 5 TFIEGDKK-EKFISYEQLFTRALKVLGAL--------QKLGIKPGDE--VVFQIEDNEDF 53
Query: 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGE 220
+ F+ CI GI+PVP+ +D L
Sbjct: 54 IYVFWACILGGIIPVPLSYG------------------------NTDEHKLKL------- 82
Query: 221 VVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTD--DTPAYIEYTTDRDGSVMGVTVTRAA 278
+ W L P + L D A+I++++ G GV +T
Sbjct: 83 ---LRVWNIL---------NNPFLITDRDSLLSLPDDIAFIQFSSGSTGEPKGVILTHKN 130
Query: 279 MLSHCRALTQACHYTEGENMVCVLDFKRETGL--WHSVLTSVLNGMHAVYIPYALMKVNP 336
+L++ A+ +A T + + + + GL +H LT G++ +P L P
Sbjct: 131 LLTNIEAIIEAAEITSEDVFLSWMPLTHDMGLIGFH--LTPTALGINQYLMPTRLFIRRP 188
Query: 337 ASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDIS--LSSLRLLLVGDGANPWSLSSCD 394
W+ +++RA++ + + L K K I LSS+RL+ +GA P S C+
Sbjct: 189 LLWLDKASQHRATILSSPNFGYKYLLKHFKTEKIIDWDLSSVRLIF--NGAEPISADLCE 246
Query: 395 QFLSVFQSKGLRPDAICPCASSSE-CLTVSVRRPG-RAGVNATGRGVLSMSGLSYGVVRV 452
+FL GLRP+A+ P +E L VS +PG R L + ++ +
Sbjct: 247 EFLEKMAPFGLRPNAMYPVYGLAEATLAVSFPKPGEPFKTVCLDRNHLKVGV---KIIEI 303
Query: 453 DQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGL 512
D +NS +++ + G + GC + +V D + +G I + S Y+ P
Sbjct: 304 DPKNS-DAISFVEVGSPIDGCEIRIV--DDAGEVLPDRTIGHIQIKGDNVTSGYYNNPE- 359
Query: 513 SNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRK------- 565
A +++ D + ++G LGFL R+G + +TGR
Sbjct: 360 -----------ATKKSITPDGWLKTGDLGFL-----------RNGRLVITGRAKDIIIVN 397
Query: 566 -HN--ADDIIATVLAVEPMKFIYRGRIAVFSIR--VLRDERICVIAEQRPDCSEEESFQW 620
N DI VE +K GR+A + + E + + E R +
Sbjct: 398 GQNYYPHDIERVAEQVEGIKL---GRVAACGVYDEKEQSEEVVIFVEYRQSLDDFTPLAL 454
Query: 621 --MSRVLQAVD-SIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667
V + + +I V +P +PKT G I + ++FL G
Sbjct: 455 KIKRHVNKKMGLNIDHV-------IPVRSIPKTTSGKIQRYKLAQQFLNG 497
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPS similar to mycosubtilin synthase subunit A (MycA). Mycosubtilin, which is characterized by a beta-amino fatty acid moiety linked to the circular heptapeptide Asn-Tyr-Asn-Gln-Pro-Ser-Asn, belongs to the iturin family of lipopeptide antibiotics. The mycosubtilin synthase subunit A (MycA) combines functional domains derived from peptide synthetases, amino transferases, and fatty acid synthases. Nonribosomal peptide synthetases are large multifunction enzymes that synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 499 |
| >gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 6e-26
Identities = 102/469 (21%), Positives = 166/469 (35%), Gaps = 94/469 (20%)
Query: 114 TYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIV 173
TY +L R+ ++A L + GDR+A++ PN+ ++ A + AG
Sbjct: 1 TYRELDERANRLAAALR--------ALGVGPGDRVAILLPNS--PEWVVAILAVLKAGAA 50
Query: 174 PVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVV-----AFKGWP 228
VP++ L ++ ++L + +V +T D L L + +V
Sbjct: 51 YVPLDPSLPAE-----RLAYILEDSEAKVLITDDELLPKLLEVLLKLLVLLALIIVGDDG 105
Query: 229 KLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSV---MGVTVTRAAMLSHCRA 285
+ + + L P P + D AYI YT+ G+ GV +T +L+
Sbjct: 106 EGLDLLDDELLAGASAEPPAPPVDPDDLAYIIYTS---GTTGKPKGVMLTHRNLLALAAG 162
Query: 286 LTQACHYTEGENMVCVLD--FKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMI 343
L + T G+ ++ +L F G + +L G V +P + +PA + +I
Sbjct: 163 LAERFGLTPGDRVLLLLPLHF---DGSVWEIFGPLLAGGTLVLVPKFTL--DPARLLDLI 217
Query: 344 TKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSK 403
KY+ +V L LL + K LSSLRL+L G P + F
Sbjct: 218 EKYKVTVLYGVPTLLR-LLLKAPEEKKYDLSSLRLVLS--GGEPLPPELLRRLRERF--- 271
Query: 404 GLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTL 463
G P + +E V+ G
Sbjct: 272 GGVP--LVNGYGPTETTVVATANLPGDPEVKPGS-------------------------- 303
Query: 464 QDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLL 523
G+ +PG + V+ D EVGE+C+ G Y P L+ F +
Sbjct: 304 --IGRPLPGVEVKVL--DEEGEPVPPGEVGELCIRGPGVARGYLNDPELTAERF-----V 354
Query: 524 ADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDII 572
DG R+G LG DG + + GRK DD +
Sbjct: 355 EDG-----WGMYRTGDLGRWDE----------DGYLEILGRK---DDQV 385
|
Length = 412 |
| >gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 4e-24
Identities = 159/626 (25%), Positives = 244/626 (38%), Gaps = 150/626 (23%)
Query: 104 DPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCA 163
DP G ++ TLT+ +L R+L VA L R S+ GDR ++ P + ++ A
Sbjct: 28 DPAG-VAETLTWSQLYRRTLNVAEEL------RRHGST---GDRAVILAPQG--LEYIVA 75
Query: 164 FYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVA 223
F G + AG++ VP+ VP A +++ +L V LT+ A +V
Sbjct: 76 FLGALQAGLIAVPLSVPQGG--AHDERVSAVLRDTSPSVVLTTSA--------VVDDV-- 123
Query: 224 FKGWPKLTWFVTEHLAKTPKDWAP--------------QPRLTDD---TPAYIEYTTDRD 266
TE++A P AP + AY++YT+
Sbjct: 124 -----------TEYVAPQPGQSAPPVIEVDLLDLDSPRGSDARPRDLPSTAYLQYTS--- 169
Query: 267 GSVMGVTVTRA---AMLSHCRALTQAC---------HY----TEGENMVCVLDFKRETGL 310
GS TR M+SH R + +V L F + GL
Sbjct: 170 GS------TRTPAGVMVSH-RNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGL 222
Query: 311 WHSVLTSVLNGMHAVYI-PYALMKVNPASWMQMITKYRA--SVAVVKSRDLHWGLLATKD 367
V +L G AV P A ++ PA WMQ++ S A + +L A +
Sbjct: 223 VLGVCAPILGGCPAVLTSPVAFLQ-RPARWMQLLASNPHAFSAAPNFAFEL-----AVRK 276
Query: 368 HKDISLSSLRL---LLVGDGA---NPWSLSSCDQFLSVFQSKGLRPDAICPCASSSEC-L 420
D ++ L L L + G+ +P +L +F F LR AI P +E +
Sbjct: 277 TSDDDMAGLDLGGVLGIISGSERVHPATL---KRFADRFAPFNLRETAIRPSYGLAEATV 333
Query: 421 TVSVRRPGRAGVN--------ATGRGVLSMSG-----LSYGVVRVDQENSLTSLTLQDCG 467
V+ R PG+ + + G +G +SYG R S T++
Sbjct: 334 YVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR--------SPTVR--- 382
Query: 468 QVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFK---VTPLLA 524
+V D+ C VGEI V + YW P + TF V P +
Sbjct: 383 ---------IVDPDT-CIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDP--S 430
Query: 525 DGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFI 584
GT + + R+G LGF+ G L F+ G L+ V GR H DDI AT+ + I
Sbjct: 431 PGT--PEGPWLRTGDLGFISEGEL-FIVGRIKDLLIVDGRNHYPDDIEATI------QEI 481
Query: 585 YRGRIAVFSIRVLRDERICVIAE-QRPDCSEEESFQWM----SRVLQAVDSIHQVGLYCL 639
GR+A S+ E++ I E ++ S+EE+ + V A+ H + + L
Sbjct: 482 TGGRVAAISVPDDGTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADL 541
Query: 640 ALVPPNYLPKTPLGGIHLSECKRRFL 665
LV P +P T G I + C ++
Sbjct: 542 VLVAPGSIPITTSGKIRRAACVEQYR 567
|
Length = 578 |
| >gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 8e-24
Identities = 150/627 (23%), Positives = 243/627 (38%), Gaps = 141/627 (22%)
Query: 1190 VDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGA 1249
D A+ LT SQL++R V L +TGD ++ P G++ I AF G L G
Sbjct: 27 QDPAGVAETLTWSQLYRRTLNVAEELRRHG--STGDRAVILAPQGLEYIVAFLGALQAGL 84
Query: 1250 VPVTIRPPHPQN--------LQTTLPTV-----RMIVDVSKSVLVLSNQNVIKLLKSKEA 1296
+ V + P L+ T P+V ++ DV++ V Q+
Sbjct: 85 IAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSA--------- 135
Query: 1297 SNVVDIKSWPTILDTD----DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHA 1352
P +++ D D P+ A P+ AYL ++ +T AG+ +SH
Sbjct: 136 ---------PPVIEVDLLDLDSPRGSDARPRDLPST---AYLQYTSGSTRTPAGVMVSHR 183
Query: 1353 AVTSLCRSMKLACELYPSRHIALCLD-------P-YCGLGFALWVLSSVYSGHHSILIPP 1404
V + +L + + D P Y +G L V + + G ++L P
Sbjct: 184 NVIANFE--QLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSP 241
Query: 1405 SEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIA---LGCVRTCV 1461
PA W+ ++ + EL + S ++A LG V +
Sbjct: 242 VAFLQRPARWMQLLASNPHAFSAAPNFAFELAVRKTSDD-------DMAGLDLGGVLGII 294
Query: 1462 VVAEERPRIHLTSA--FSKLFSALGLSPRAVSTSFG---CRVNIAICLQGASSPEPSCVY 1516
+E R+H + F+ F+ L A+ S+G V +A P V
Sbjct: 295 SGSE---RVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVAT---REPGQPPESVR 348
Query: 1517 VDLRALRNDRV---------SLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSH 1567
D L LV GSP S P V+ I +P+T +C
Sbjct: 349 FDYEKLSAGHAKRCETGGGTPLVSYGSPRS----------PTVR--IVDPDTCIECPAGT 396
Query: 1568 LGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT---GNTGELYARTGYLGFLRRTSPA 1624
+GEIWV + A+GY+ +E+E + F A LV G + RTG LGF+
Sbjct: 397 VGEIWVHGDNVAAGYWQ-KPEETE--RTFGATLVDPSPGTPEGPWLRTGDLGFI------ 447
Query: 1625 GVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKI--AECAVFT 1682
+F+VG + + +++ G ++P DIE ++ ++I A +
Sbjct: 448 -------------SEGELFIVGRIKDLLIVDGRNHYPDDIEATI----QEITGGRVAAIS 490
Query: 1683 ----WTNLLVVVVEL------DGNESEALDLVP-LVTNAVLEEHHLIVGVAVVVDPGVVP 1731
T LV ++EL D + L V VT+A+ + H L V V+V PG +P
Sbjct: 491 VPDDGTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIP 550
Query: 1732 INSRGEKQR-----MHLRDGFLADQLD 1753
I + G+ +R + +D F +LD
Sbjct: 551 ITTSGKIRRAACVEQYRQDEF--TRLD 575
|
Length = 578 |
| >gnl|CDD|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 8e-23
Identities = 131/583 (22%), Positives = 235/583 (40%), Gaps = 67/583 (11%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP- 1257
LT +QL R VGA L + A GD VA++ P GID + F+ + G + V + P
Sbjct: 69 LTWTQLGVRLRAVGARLQQVAG--PGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFAPE 126
Query: 1258 ---HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDM 1314
H + L T L V ++ + + + ++ L P ++ D +
Sbjct: 127 LPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRR---------PRVIAIDAI 177
Query: 1315 PKKKLAALYRAPTAEM--LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELY-PSR 1371
P + + +++L ++ +T G++++H AV + M L+ +L +
Sbjct: 178 PDS-AGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNT 236
Query: 1372 HIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVS----QYRVRDTF 1427
H L Y +G ++ +VY GH +++ P + V P W+ A+S RV
Sbjct: 237 HGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVR-RPQRWIKALSEGSRTGRVVTAA 295
Query: 1428 CSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSP 1487
++ +GL + N+ L ++ E I + F+K F+ GL
Sbjct: 296 PNFAYEWAAQRGLPAEGDDIDLSNVVL-------IIGSEPVSIDAVTTFNKAFAPYGLPR 348
Query: 1488 RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL 1547
A S+G A EPS VY+D L R V +P+++ + G++
Sbjct: 349 TAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVA 408
Query: 1548 PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESE--YAQQFSARLVTGN- 1604
+I +P+T + D +GEIW+ + GY+ +E+E + + +RL G+
Sbjct: 409 RSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGR-PEETERTFGAKLQSRLAEGSH 467
Query: 1605 -----TGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRY 1659
+ RTG LG L +++ G + + I++ G +
Sbjct: 468 ADGAADDGTWLRTGDLGVY-------------------LDGELYITGRIADLIVIDGRNH 508
Query: 1660 HPIDIENSVMRAHKKIAECAVFTWT------NLLVVVVE--LDGNESEALDLVPLVTNAV 1711
+P DIE +V A + V +T LV+V E + ++ + + AV
Sbjct: 509 YPQDIEATVAEASPMVRRGYVTAFTVPAEDNERLVIVAERAAGTSRADPAPAIDAIRAAV 568
Query: 1712 LEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDP 1754
H L V +V G +P + G+ R R +L +L
Sbjct: 569 SRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGRLGV 611
|
Length = 612 |
| >gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-22
Identities = 137/576 (23%), Positives = 232/576 (40%), Gaps = 84/576 (14%)
Query: 143 KSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVP-----LTRRDAGSQQIGFLLGS 197
K GDR+A++ P N +++L AF+G ++AG + VP+ P + R A +L
Sbjct: 77 KPGDRVAILAPQN--LDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHA-------VLDD 127
Query: 198 CDIQVALTSDAC-------LKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPR 250
C LT+ + P V+A P + + T W P P
Sbjct: 128 CTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVP-------DEVGAT---WVP-PE 176
Query: 251 LTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310
+DT AY++YT+ GV +T + ++ + A EG+ V L F + GL
Sbjct: 177 ANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGL 236
Query: 311 WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGL-------L 363
+L ++L P A ++ P W++ + + S ++ L
Sbjct: 237 ITVLLPALLGHYITFMSPAAFVR-RPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGL 295
Query: 364 ATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSEC-LTV 422
+ LS+++ LL +G+ P S +S +F F GL P AI P +E L V
Sbjct: 296 PKDGEPPLDLSNVKGLL--NGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFV 353
Query: 423 S-VRRPGRAGVNATGRGVLSMSGLSYGVVRVDQ--ENSLTSLTLQDCGQVMPGCIMTVVK 479
S V R L+ + V V N++ ++ G+V +V
Sbjct: 354 STTPMDEEPTVIYVDRDELN----AGRFVEVPADAPNAVAQVS---AGKVGVSEWAVIVD 406
Query: 480 MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFK------VTPLLADGTALSQDT 533
++ S L ++GEI + G+ YWG P + TF+ ++ A+G
Sbjct: 407 PETASEL-PDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAP-DDAL 464
Query: 534 YTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS 593
+ R+G G G L ++ G L+ + GR H D+ T A E K + G +A FS
Sbjct: 465 WVRTGDYGVYFDGEL-YITGRVKDLVIIDGRNHYPQDLEYT--AQEATKALRTGYVAAFS 521
Query: 594 I-------RVLRD-------------ERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQ 633
+ V D E++ ++AE+ P + + + A+ H
Sbjct: 522 VPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHKLDPQPIADDIRAAIAVRHG 581
Query: 634 VGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNL 669
V + + LVP +P+T G I C+ +L+G+L
Sbjct: 582 VTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGSL 617
|
Length = 631 |
| >gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 3e-22
Identities = 148/607 (24%), Positives = 248/607 (40%), Gaps = 62/607 (10%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
LP L A+QR + T L + + L+Y L R+ +A L
Sbjct: 7 LPLTLVQALQRRAAQTPDRLALRFLADDPGEGVVLSYRDLDLRARTIAAAL--------- 57
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
++ GDR L++P+ +++ AF+GC++AG++ VP P + R +++ ++
Sbjct: 58 QARASFGDRAVLLFPSG--PDYVAAFFGCLYAGVIAVPAYPPESARRHHQERLLSIIADA 115
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAY 258
+ ++ LT L E+ A L V + W +P L D A+
Sbjct: 116 EPRLLLTVADLRDSL--LQMEELAAANAPELLC--VDTLDPALAEAWQ-EPALQPDDIAF 170
Query: 259 IEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCV--LDFKRETGLWHSVLT 316
++YT+ GV V+ ++++ + + + V V L + GL +L
Sbjct: 171 LQYTSGSTALPKGVQVSHGNLVANEQLIRHGFGIDLNPDDVIVSWLPLYHDMGLIGGLLQ 230
Query: 317 SVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSL 376
+ +G+ V + A P W++ I++Y +++ D + L + +S S+L
Sbjct: 231 PIFSGVPCVLMSPAYFLERPLRWLEAISEYGGTIS--GGPDFAYRLC----SERVSESAL 284
Query: 377 -RLLLVG-----DGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSEC-LTVSVRRPGR 429
RL L G+ P S ++F F + G PD+ +E L VS R G+
Sbjct: 285 ERLDLSRWRVAYSGSEPIRQDSLERFAEKFAACGFDPDSFFASYGLAEATLFVSGGRRGQ 344
Query: 430 AGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKT 489
G L + + R + T L CG+ PG + +V S L
Sbjct: 345 ------GIPALELDAEALARNRAEPG---TGSVLMSCGRSQPGHAVLIVDPQSLEVL-GD 394
Query: 490 DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLV 549
+ VGEI + YW P S TF + DG T+ R+G LGFL G L
Sbjct: 395 NRVGEIWASGPSIAHGYWRNPEASAKTF----VEHDGR-----TWLRTGDLGFLRDGEL- 444
Query: 550 FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAE-- 607
FV G ++ V G DI TV ++ + +GR+A F++ +E I + AE
Sbjct: 445 FVTGRLKDMLIVRGHNLYPQDIEKTV--EREVEVVRKGRVAAFAVNHQGEEGIGIAAEIS 502
Query: 608 ---QRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664
Q+ + + + QAV Q + L+ P LPKT G + S C+ R
Sbjct: 503 RSVQKILPPQA----LIKSIRQAVAEACQEAPSVVLLLNPGALPKTSSGKLQRSACRLRL 558
Query: 665 LEGNLHP 671
+G+L
Sbjct: 559 ADGSLDS 565
|
Length = 4334 |
| >gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-21
Identities = 117/586 (19%), Positives = 219/586 (37%), Gaps = 79/586 (13%)
Query: 1186 GVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCL 1245
G++ +D + + + ++L + AER+ A L + GD V L D + AF+ C+
Sbjct: 27 GITYIDADGSEEFQSYAELLEEAERILAGLRAL-GLKPGDSVILQLERNEDFVTAFWACV 85
Query: 1246 YVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSK---SVLVLSNQNVIKLLKSKEASNVVDI 1302
G VPV + P V + ++ + S ++L++ ++ L +
Sbjct: 86 LGGFVPVPVAVPP--TYDEPNAAVAKLRNIWELLGSPVILTDAALVAALA--GLRTRAGL 141
Query: 1303 KSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK 1362
++ +L +++ A + A L + +TG+ + ++H + +
Sbjct: 142 EA-LRVLAIEELRSAPPDAPLHPARPDDPALLLLTSGSTGVPKCVVLTHRNILARSAGTV 200
Query: 1363 LACELYPSRHIALC---LDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVS 1419
+ ++L LD G+ L VY G I +P + +P WL +
Sbjct: 201 QVNG-FTPDDVSLNWMPLDHVGGIVM--LHLRDVYLGCQQIHVPTDYILADPLRWLDLID 257
Query: 1420 QYRVRDTFC---SYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAF 1476
+YRV T+ ++ + L+ ++ +++ R+ L +R ++ A E F
Sbjct: 258 RYRVTITWAPNFAFAL-------LNDALERIEDRSWDLSSLR-YIINAGEAVVAKTIRRF 309
Query: 1477 SKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPH 1536
+L + GL A+ +FG + L + P
Sbjct: 310 LELLAPYGLPADAIRPAFGMSETCSGVTYSRGFRTGPDTGGVLVDSLTGPLRFAAADHPE 369
Query: 1537 SLCLLESGKLLPGVKVIIAN------PETKGQCGDSHLGEIWVQSPHNASGYFSLYGDES 1590
++ +E G+ +PGV + I + PE +G + V+ P SGY Y +
Sbjct: 370 AVTFVELGRPIPGVAIRIVDEDGALLPEG-------EVGRLQVRGPTVTSGY---YRNPE 419
Query: 1591 EYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDE 1650
A+ F T + + RTG LGFL G G K +
Sbjct: 420 ANAEAF--------TEDGWFRTGDLGFLHD-------GRLTITGREK------------D 452
Query: 1651 TIMLRGMRYHPIDIENSVMRAH----KKIAECAVF---TWTNLLVV--VVELDGNESEAL 1701
I++ G+ Y+ +IE +V + A CAV + T+ L V V D +
Sbjct: 453 MIIINGVNYYNHEIEAAVEQVPGVEPSFTAACAVRDAGSGTDELAVFFVPRYD-LDDRLA 511
Query: 1702 DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGF 1747
L+ + V + + + + P S G+ QR LR F
Sbjct: 512 ALLRAIRTHVARKIGIAPAYVIPLAKEDFPKTSLGKIQRAQLRKRF 557
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPSs that synthesize toxins and antitumor agents; for example, TubE for Tubulysine, CrpA for cryptophycin, TdiA for terrequinone A, KtzG for kutzneride, and Vlm1/Vlm2 for Valinomycin. Nonribosomal peptide synthetases are large multifunctional enzymes which synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 560 |
| >gnl|CDD|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 6e-21
Identities = 148/569 (26%), Positives = 233/569 (40%), Gaps = 91/569 (15%)
Query: 145 GDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVP-----LTRRDAGSQQIGFLLGSCD 199
GDR+A++ P I+++ F+ I AG + VP+ P R D L +
Sbjct: 92 GDRVAILAPQG--IDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDT-------ALRDAE 142
Query: 200 IQVALTSDAC-------LKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLT 252
V LT+ A L+ LP+ V+A P + + P T
Sbjct: 143 PTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIP----------DSAGESFVPVELDT 192
Query: 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDF-KRETG-- 309
DD ++++YT+ +GV +T A+ L Q M+ +D R T
Sbjct: 193 DDV-SHLQYTSGSTRPPVGVEITHRAV---GTNLVQ---------MILSIDLLDRNTHGV 239
Query: 310 ----LWHSVLTSVLNGMHAVY-------IPYALMKVNPASWMQMIT---KYRASVAVVKS 355
L+H + S++ G AVY P A ++ P W++ ++ + V +
Sbjct: 240 SWLPLYHDMGLSMI-GFPAVYGGHSTLMSPTAFVR-RPQRWIKALSEGSRTGRVVTAAPN 297
Query: 356 RDLHW----GLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAIC 411
W GL A D DI LS++ L++ G+ P S+ + F F GL A
Sbjct: 298 FAYEWAAQRGLPAEGD--DIDLSNVVLII---GSEPVSIDAVTTFNKAFAPYGLPRTAFK 352
Query: 412 PCASSSEC-LTVSVRRP-GRAGVNATGRGVLSMSGLSYG-VVRVDQENSLTSLTLQDCGQ 468
P +E L V+ P V R L G VRV + + CGQ
Sbjct: 353 PSYGIAEATLFVATIAPDAEPSVVYLDR-----EQLGAGRAVRVAADAPNAVAHVS-CGQ 406
Query: 469 VMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTF--KVTPLLADG 526
V +V D+ + L EVGEI + G YWG P + TF K+ LA+G
Sbjct: 407 VARSQWAVIVDPDTGAEL-PDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEG 465
Query: 527 T----ALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMK 582
+ A T+ R+G LG G L ++ G L+ + GR H DI ATV PM
Sbjct: 466 SHADGAADDGTWLRTGDLGVYLDGEL-YITGRIADLIVIDGRNHYPQDIEATVAEASPM- 523
Query: 583 FIYRGRIAVFSIRVLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALV 642
+ RG + F++ +ER+ ++AE+ S + + + AV H + + + LV
Sbjct: 524 -VRRGYVTAFTVPAEDNERLVIVAERAAGTSRADPAPAIDAIRAAVSRRHGLAVADVRLV 582
Query: 643 PPNYLPKTPLGGIHLSECKRRFLEGNLHP 671
P +P+T G + C+ ++L+G L
Sbjct: 583 PAGAIPRTTSGKLARRACRAQYLDGRLGV 611
|
Length = 612 |
| >gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 1e-20
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 798 NSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGA 857
+ G LT +L RA ++ LL++ I GD V L++P D I AFYGCLY G
Sbjct: 1 DGNGKPLYTLTYGKLWSRAAKIAYALLKKLGIKPGDRVVLVYPDPEDFIAAFYGCLYAGL 60
Query: 858 VPVTIRPPH----PQNLQTTLPTHQFISEI---------LK-WRAASTSEHVIF 897
+PV + PP Q + L + + + LK R+ +T E + F
Sbjct: 61 IPVPVEPPLSRAGSQQVGALLGSIKHYCGVAVALTSEACLKGLRSKTTGEILKF 114
|
Dip2 proteins show sequence similarity to other members of the adenylate forming enzyme family, including insect luciferase, acetyl CoA ligases and the adenylation domain of nonribosomal peptide synthetases (NRPS). However, its function may have diverged from other members of the superfamily. In mouse embryo, Dip2 homolog A plays an important role in the development of both vertebrate and invertebrate nervous systems. Dip2A appears to regulate cell growth and the arrangement of cells in organs. Biochemically, Dip2A functions as a receptor of FSTL1, an extracellular glycoprotein, and may play a role as a cardiovascular protective agent. Length = 556 |
| >gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 3e-20
Identities = 116/486 (23%), Positives = 173/486 (35%), Gaps = 72/486 (14%)
Query: 203 ALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYT 262
+ + A + G P AA V+ KG LT V + LA P +D A ++ T
Sbjct: 106 MIGAKAVVVGEPFLAAAPVLEEKGIRVLT--VADLLAADP---IDPVETGEDDLALMQLT 160
Query: 263 TDRDGSVMGVTVTRAAMLSHCRALTQACHYT-EGENMVCVLDFKRETGLWHSVLTSVLNG 321
+ GS V +T + ++ A+ A + E + MV L + G+ + + G
Sbjct: 161 SGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFG 220
Query: 322 MHAVYIPYALMKVNPASWMQMITKYRASV--------AVVKSRDLHWGLLATKDHKDISL 373
V + +P W ++I+KYR ++ A++ R L L
Sbjct: 221 AELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARR-----LRRQAKPGAFDL 275
Query: 374 SSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSEC-LTVSVRRPGRAGV 432
SSLR L +GA P + + L GLRP+AI P +E L VS G V
Sbjct: 276 SSLRFAL--NGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLV 333
Query: 433 ---------NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSP 483
A R V + G R L +L G +PG + VV D
Sbjct: 334 VDEVDADLLAALRRAVPATK----GNTR-----RLATL-----GPPLPGLEVRVV--DED 377
Query: 484 SYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDT--YTRSGLLG 541
+ VG I + Y L DG +QD + +G LG
Sbjct: 378 GQVLPPRGVGVIELRGESVTPGY---------------LTMDGFIPAQDADGWLDTGDLG 422
Query: 542 FLGPGGLVFVCGSRDGLMTVTGRKHNADDI---IATVLAVEPMKFIYRGRIAVFSIRVLR 598
+L G V VCG ++ + GR DI A V V P +AV
Sbjct: 423 YLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRP-----GNAVAVRLDAGHS 477
Query: 599 DERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLS 658
E V E E + +V V + V + ++ P +PKTP G + +
Sbjct: 478 REGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRA 537
Query: 659 ECKRRF 664
Sbjct: 538 NAAELV 543
|
Length = 545 |
| >gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 1e-18
Identities = 116/512 (22%), Positives = 206/512 (40%), Gaps = 70/512 (13%)
Query: 1189 SVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVG 1248
S + A+ LT SQ R VGA L + K GD VA++ P +D + AF+G LY G
Sbjct: 46 STERDGVARDLTWSQFGARNRAVGARLQQVTK--PGDRVAILAPQNLDYLIAFFGALYAG 103
Query: 1249 AVPVTI----RPPHPQNLQTTLPTVRMIVDVSKSVLVLSN---QNVIKLLKSKEASNVVD 1301
+ V + P H L L D + S ++ + + V K +++ A
Sbjct: 104 RIAVPLFDPAEPGHVGRLHAVLD------DCTPSAILTTTDSAEGVRKFFRARPA----- 152
Query: 1302 IKSWPTILDTDDMPKKKLAALYRAPTA--EMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR 1359
K P ++ D +P + + A + P A + +AYL ++ +T + AG++++H + +
Sbjct: 153 -KERPRVIAVDAVPDE-VGATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVL 210
Query: 1360 SMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALW---LS 1416
+ A E L + +G +L ++ + + + P + V P W L+
Sbjct: 211 QVIDALEGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVR-RPGRWIRELA 269
Query: 1417 AVSQYRVRDTFCS---YGVMELCTKGL--SGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471
TF + + +GL G P L N+ ++ E
Sbjct: 270 RKPGGTGG-TFSAAPNFAFEHAAARGLPKDGEPP-LDLSNVK------GLLNGSEPVSPA 321
Query: 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVE 1531
F++ F+ GL P A+ S+G EP+ +YVD L R V
Sbjct: 322 SMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVP 381
Query: 1532 RGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESE 1591
+P+++ + +GK+ +I +PET + D +GEIW+ + +GY +G E
Sbjct: 382 ADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGY---WGKPEE 438
Query: 1592 YAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP--------GVSKLHDAVF 1643
A F L + R S + GAP GV ++
Sbjct: 439 TAATFQNILKS-----------------RLSESHAEGAPDDALWVRTGDYGVY-FDGELY 480
Query: 1644 VVGALDETIMLRGMRYHPIDIENSVMRAHKKI 1675
+ G + + +++ G ++P D+E + A K +
Sbjct: 481 ITGRVKDLVIIDGRNHYPQDLEYTAQEATKAL 512
|
Length = 631 |
| >gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 9e-17
Identities = 120/587 (20%), Positives = 212/587 (36%), Gaps = 114/587 (19%)
Query: 1184 PPGVSSVDTRSAAQLLTCSQLHKRAERV-GALLLERAKINTGDHVALIFPPGIDLICAFY 1242
G++ ++ + ++ QL RA +V GAL ++ I GD V D I F+
Sbjct: 1 DRGITFIEGDKKEKFISYEQLFTRALKVLGAL--QKLGIKPGDEVVFQIEDNEDFIYVFW 58
Query: 1243 GCLYVGAVPVTIRPP--HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVV 1300
C+ G +PV + L+ V +L +
Sbjct: 59 ACILGGIIPVPLSYGNTDEHKLKLL--------------------RVWNILNN------- 91
Query: 1301 DIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRS 1360
P ++ D L +L + +A++ FS +TG G+ ++H + + +
Sbjct: 92 -----PFLITDRDS----LLSL-----PDDIAFIQFSSGSTGEPKGVILTHKNLLTNIEA 137
Query: 1361 MKLACELYPSRHIALCLDPYC-GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVS 1419
+ A E+ S + L P +G + L+ G + L+P P LWL S
Sbjct: 138 IIEAAEI-TSEDVFLSWMPLTHDMGLIGFHLTPTALGINQYLMPTRLFIRRPLLWLDKAS 196
Query: 1420 QYRVRDTFC-SYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP-RIHLTSAFS 1477
Q+R ++G L K + L VR AE P L F
Sbjct: 197 QHRATILSSPNFGYKYLLKH-----FKTEKIIDWDLSSVRLIFNGAE--PISADLCEEFL 249
Query: 1478 KLFSALGLSPRAVSTSFG-CRVNIAICLQGASSPEPSCVYVDLRALR-NDRVSLVERGSP 1535
+ + GL P A+ +G +A+ P V +D L+ ++ ++ +
Sbjct: 250 EKMAPFGLRPNAMYPVYGLAEATLAVSFPKPGEP-FKTVCLDRNHLKVGVKIIEIDPKNS 308
Query: 1536 HSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQ 1595
++ +E G + G ++ I + + D +G I ++ + SGY Y + +
Sbjct: 309 DAISFVEVGSPIDGCEIRIVDDAGEV-LPDRTIGHIQIKGDNVTSGY---YNNPEATKKS 364
Query: 1596 FSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLR 1655
+ G L +TG LGFLR + + + G + I++
Sbjct: 365 ITP------DGWL--KTGDLGFLR-------------------NGRLVITGRAKDIIIVN 397
Query: 1656 GMRYHPIDIENSVMRAHK------KIAECAVFTWTN---LLVVVVELDGNESEALDLVPL 1706
G Y+P DIE ++A C V+ +V+ VE + D PL
Sbjct: 398 GQNYYPHDIERVA--EQVEGIKLGRVAACGVYDEKEQSEEVVIFVEYRQSLD---DFTPL 452
Query: 1707 VTNAVLEEHHLIVGVAVVVDPGVVPINS-----RGEKQRMHLRDGFL 1748
H+ + + +D V+P+ S G+ QR L FL
Sbjct: 453 ALKIK---RHVNKKMGLNIDH-VIPVRSIPKTTSGKIQRYKLAQQFL 495
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPS similar to mycosubtilin synthase subunit A (MycA). Mycosubtilin, which is characterized by a beta-amino fatty acid moiety linked to the circular heptapeptide Asn-Tyr-Asn-Gln-Pro-Ser-Asn, belongs to the iturin family of lipopeptide antibiotics. The mycosubtilin synthase subunit A (MycA) combines functional domains derived from peptide synthetases, amino transferases, and fatty acid synthases. Nonribosomal peptide synthetases are large multifunction enzymes that synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 499 |
| >gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 2e-16
Identities = 123/587 (20%), Positives = 198/587 (33%), Gaps = 169/587 (28%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT +L + R G L E I + V LI + AF+G + +GAVPV
Sbjct: 31 LTYGELQEEVNRWGNALRE-LGIERENRVLLILLDTPEFPTAFWGAIKIGAVPV------ 83
Query: 1259 PQNLQTTLPTVR-MIVDVSKSVLVLSNQ--NVIKLLKSKEAS---NVVDIKSWPTILDTD 1312
P N T R + D VLV+S + V+K K+ +V + P L
Sbjct: 84 PINTLLTPDDYRYYLNDSRARVLVISEELWEVLKPALQKDPHLRHVIVVGGAGPGALSYA 143
Query: 1313 DMPKKKLAALYRAPT-AEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSR 1371
+ L A T A+ +A+ +S +TG G+ H M + E Y
Sbjct: 144 QLIATAAEELEAAATSADDMAFWLYSSGSTGRPKGVVHLH-------HDMLVTAEAYAKN 196
Query: 1372 HIALCLDPYC----------GLG----FALWVLSSVYSGHHSILIPPSEVEVNPALWLSA 1417
+ + D GLG F L V G ++L+P P +
Sbjct: 197 VLGITEDDVVFSAAKLFFAYGLGNGLYFPLSV------GATTVLMPE---RPTPDAVFAT 247
Query: 1418 VSQYRVRDTFCS----YGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473
+ +Y+ F Y M + P+ R+++ +R CV E
Sbjct: 248 IERYKP-TVFFGVPTLYAAML--------AAPEKPERDLS--SLRLCVSAGE-------- 288
Query: 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERG 1533
AL P + + + I L G S E +++ R V+ G
Sbjct: 289 --------AL---PAEIGYRWKELFGLEI-LDGIGSTEMLHIFLSNRPGA------VKYG 330
Query: 1534 SPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYA 1593
+ SGK +PG +V + + + + D +GE+WV+ +A+GY++
Sbjct: 331 T--------SGKPVPGYEVKLVDED-GEEVADGEIGELWVRGDSSAAGYWNRR------- 374
Query: 1594 QQFSARLVTG---NTGELYART--GYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGAL 1648
+ + G TG+ Y R GY + R+ D + V
Sbjct: 375 -EKTRETFVGEWTRTGDKYYRDEDGYYWYCGRS------------------DDMLKVS-- 413
Query: 1649 DETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVT 1708
G+ P ++E+ + H + E AV +
Sbjct: 414 -------GIWVSPFEVED-ALLQHPAVLEAAVVGAED----------------------- 442
Query: 1709 NAVLEEHHLIVGVAVVV-DPGVVPINSRGEKQRMHLRDGFLADQLDP 1754
E L A VV G P + L+D F+ D+L P
Sbjct: 443 -----EDGLTKPKAFVVLKDGYQP----SPELETELKD-FVKDKLAP 479
|
Benzoate CoA ligase and 4-hydroxybenzoate-coenzyme A ligase catalyze the first activating step for benzoate and 4-hydroxybenzoate catabolic pathways, respectively. Although these two enzymes share very high sequence homology, they have their own substrate preference. The reaction proceeds via a two-step process; the first ATP-dependent step forms the substrate-AMP intermediate, while the second step forms the acyl-CoA ester, releasing the AMP. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Some bacteria can use benzoic acid or benzenoid compounds as the sole source of carbon and energy through degradation. Benzoate CoA ligase and 4-hydroxybenzoate-Coenzyme A ligase are key enzymes of this process. Length = 506 |
| >gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 1e-15
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 783 WRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPG 842
RAA+ + +T L + LT ++L +RA + A L GD V L+ PPG
Sbjct: 1 ARAAAQPDAR-YTFLFDDDDEEETLTYAELDRRARAIAARLQALGA--PGDRVLLLAPPG 57
Query: 843 IDLICAFYGCLYVGAVPVTIRPPHPQ 868
+D + AF+GCLY GA+ V PP
Sbjct: 58 LDFVAAFFGCLYAGAIAVPAPPPRRL 83
|
FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin. Length = 547 |
| >gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 1e-15
Identities = 101/507 (19%), Positives = 172/507 (33%), Gaps = 115/507 (22%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT + L K+A R+ A L + + GD VALI P I+ F GCL G + + +
Sbjct: 11 LTFADLLKKALRL-AKGLRKLGLKQGDVVALISPNSIEFPPVFLGCLAAGGI---VSAAN 66
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLK--SKEASNVVDI------KSWPTILD 1310
P L + SK L+ + + + +K +KE VV I ++
Sbjct: 67 PSYTPDEL--AHQLKI-SKPKLIFCDPDELDKVKEAAKELGPVVRIIVLDSAPDGVLRIE 123
Query: 1311 TDDMPKKKLAALYRAPT----AEMLAYLDFSVSTTGMLAGIKMSH---AAVTSLCRSMKL 1363
P+ +R + A L +S TTG+ G+ +SH A S +
Sbjct: 124 DLLEPRLGAEDEFRPTPLIDGKDDTAALLYSSGTTGLPKGVMLSHKNIIANLSQVQDTLK 183
Query: 1364 ACELYPSRHIALCLDPY---CGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQ 1420
+ + L P+ GL L S+ G I++P + E +L + +
Sbjct: 184 GNPDSSNDVV-LTFLPFYHAYGLTTTLA---SLLCGATVIIMPKFDSE----TFLKLIEK 235
Query: 1421 YRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLF 1480
Y+V F + L+ S P + +++ L FS
Sbjct: 236 YKVTSLFLVPPIAVA----LAKS-PLVDKYDLS-----------------SLRVIFS--- 270
Query: 1481 SALGLSP--RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSL 1538
G +P + + R QG E +P
Sbjct: 271 ---GAAPLSKELQEELRKRFPNTTIKQGYGMTE---------------TGPATTLTPPGD 312
Query: 1539 CLLES-GKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFS 1597
S G+L+P V+ I + + G + GE+ V+ P GY + +
Sbjct: 313 EKPGSVGRLVPNVEAKIVDEDGGKSLGPNERGELCVKGPQIMKGY---LNNPEATKETI- 368
Query: 1598 ARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA---VFVVGALDETIML 1654
+ + TG +G+ D ++V E I
Sbjct: 369 -------DEDGWLHTGDIGYF---------------------DEDGNFYIVDRKKELIKY 400
Query: 1655 RGMRYHPIDIENSVMRAHKKIAECAVF 1681
+G + P ++E +V+ H K+A+ AV
Sbjct: 401 KGYQVPPAELE-AVLLEHPKVADAAVI 426
|
This family contains two functionally unique groups of proteins; one group is insect firefly luciferases and the other is plant 4-coumarate:coenzyme A ligases. However, they share significant sequence similarity in spite of their functional diversity. Luciferase catalyzes the production of light in the presence of MgATP, molecular oxygen, and luciferin. In the first step, luciferin is activated by acylation of its carboxylate group with ATP, resulting in an enzyme-bound luciferyl adenylate. In the second step, luciferyl adenylate reacts with molecular oxygen, producing an enzyme-bound excited state product (Luc=O*) and releasing AMP. This excited-state product then decays to the ground state (Luc=O), emitting a quantum of visible light. 4-coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and then the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids. Length = 487 |
| >gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 5e-15
Identities = 125/590 (21%), Positives = 219/590 (37%), Gaps = 94/590 (15%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
L L RA GA L + GD VALI D + AF+ C Y G VPV + P
Sbjct: 50 LPYQTLRARA-EAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPL--PL 106
Query: 1259 PQNL---QTTLPTVRMIVDVSKSVLVLSNQNVIKLLKS-KEASNVVDIKSWPTILDTDDM 1314
P ++ + +R ++ ++ +++ ++ + + ++ + S
Sbjct: 107 PMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVLSH-AWFKALPE 165
Query: 1315 PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRS-----MKLACELYP 1369
L PT + +AYL +S +T G+ ++H A+ + R+ +K + P
Sbjct: 166 ADVALP----RPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLK----VRP 217
Query: 1370 SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFC- 1428
L Y +G ++L+ V + +P + P WL +S+ R ++
Sbjct: 218 GDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSP 277
Query: 1429 SYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPR 1488
+G ELC + ++ + L C R + A + R + F++ F+ G +
Sbjct: 278 PFG-YELCARRVNSK----DLAELDLSCWRVAGIGA-DMIRPDVLHQFAEAFAPAGFDDK 331
Query: 1489 AVSTSFG-----CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHS-----L 1538
A S+G V+ + G E VD L ++
Sbjct: 332 AFMPSYGLAEATLAVSFSPLGSGIVVEE-----VDRDRLEYQGKAVAPGAETRRVRTFVN 386
Query: 1539 CLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSA 1598
C GK LPG ++ I N E + +G I V+ P SGYF + S
Sbjct: 387 C----GKALPGHEIEIRN-EAGMPLPERVVGHICVRGPSLMSGYF---------RDEESQ 432
Query: 1599 RLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMR 1658
V G L TG LG+L L +++ G + I++ G
Sbjct: 433 D-VLAADGWL--DTGDLGYL-------------------LDGYLYITGRAKDLIIINGRN 470
Query: 1659 YHPIDIENSVMRAHKKI--AECAVFTWTN----LLVVVVELDGNESEA-LDLVPLVTNAV 1711
P DIE ++ + A F+ +V++V+ ++ E L+ + V
Sbjct: 471 IWPQDIEWIA-EQEPELRSGDAAAFSIAQENGEKIVLLVQCRISDEERRGQLIHALAALV 529
Query: 1712 LEEHHLIVGVAVVVD---PGVVPINSRGEKQRMHLRDGFLADQLDPIYVA 1758
E GV V+ P +P S G+ R + +L+ + VA
Sbjct: 530 RSEF----GVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSGAFASLDVA 575
|
Length = 579 |
| >gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 2e-14
Identities = 84/462 (18%), Positives = 156/462 (33%), Gaps = 101/462 (21%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
LT+ LL ++L++A L LK GD +AL+ PN+ I F F GC+ AG
Sbjct: 10 ELTFADLLKKALRLAKGLRKL--------GLKQGDVVALISPNS--IEFPPVFLGCLAAG 59
Query: 172 IV--PV-----PIEVPLTRRDAGSQQIGFLLGS-CDIQVALTSDACLKGLPKTAAGEVVA 223
+ P E+ + + + + ++ + L + + +
Sbjct: 60 GIVSAANPSYTPDELAHQLKISKPK---LIFCDPDELDKVKEAAKELGPVVRIIVLDSAP 116
Query: 224 FKGWPKLTWFVTEHLAKTPKDWAPQPRLT-DDTPAYIEYTTDRDGSVMGVTVTR---AAM 279
+ E ++ P P + D A + Y++ G GV ++ A
Sbjct: 117 DGVLRIED--LLEPRLGAEDEFRPTPLIDGKDDTAALLYSSGTTGLPKGVMLSHKNIIAN 174
Query: 280 LSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASW 339
LS + + + + ++ L F GL + L S+L G + +P K + ++
Sbjct: 175 LSQVQDTLKGNPDSSNDVVLTFLPFYHAYGLT-TTLASLLCGATVIIMP----KFDSETF 229
Query: 340 MQMITKYRAS---------VAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSL 390
+++I KY+ + VA+ KS LSSLR++ GA P S
Sbjct: 230 LKLIEKYKVTSLFLVPPIAVALAKS----------PLVDKYDLSSLRVIFS--GAAPLSK 277
Query: 391 SSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVV 450
++ F + ++ G G M+
Sbjct: 278 ELQEELRKRFPNTTIKQ----------------------------GYG---MTETGPATT 306
Query: 451 RVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLP 510
+ G+++P +V D L +E GE+CV Y
Sbjct: 307 LTPPGDEKPG----SVGRLVPNVEAKIVDEDGGKSL-GPNERGELCVKGPQIMKGYLN-- 359
Query: 511 GLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552
N A + +D + +G +G+ G ++
Sbjct: 360 ---NPE-------ATKETIDEDGWLHTGDIGYFDEDGNFYIV 391
|
This family contains two functionally unique groups of proteins; one group is insect firefly luciferases and the other is plant 4-coumarate:coenzyme A ligases. However, they share significant sequence similarity in spite of their functional diversity. Luciferase catalyzes the production of light in the presence of MgATP, molecular oxygen, and luciferin. In the first step, luciferin is activated by acylation of its carboxylate group with ATP, resulting in an enzyme-bound luciferyl adenylate. In the second step, luciferyl adenylate reacts with molecular oxygen, producing an enzyme-bound excited state product (Luc=O*) and releasing AMP. This excited-state product then decays to the ground state (Luc=O), emitting a quantum of visible light. 4-coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and then the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids. Length = 487 |
| >gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 3e-14
Identities = 72/371 (19%), Positives = 127/371 (34%), Gaps = 85/371 (22%)
Query: 1331 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVL 1390
A++ ++ TTG G+ +SH + + +++ A L + L + +G +L
Sbjct: 2 PAFILYTSGTTGKPKGVVLSHRNLLANAQALAQAIGLTEGDVLLSVLPLFHVVGGGSGLL 61
Query: 1391 SSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKAR 1450
++ +G +L P +L + QYRV +GV P L
Sbjct: 62 GALLAGGTVVLYEGFP---FPLSFLELIEQYRVT---VLFGV------------PTLYDA 103
Query: 1451 NIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSP---RAVSTSFGCRVNIAICLQGA 1507
+ A E L+S + LSP G + G
Sbjct: 104 ----------LAKAAEDRGYDLSSLRLLISGGEPLSPELLERFEERPGAPILEGY---GL 150
Query: 1508 SSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSH 1567
+ E S V + P + G+ +PGV+V + + E K
Sbjct: 151 T--ETSVV-TSTNPDSELK-------KPGT-----VGRPVPGVEVRVVDEEGKP-LPPGE 194
Query: 1568 LGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVA 1627
+GE+ V+ P GY + + E T + + RTG LG+L G
Sbjct: 195 VGELVVRGPWVMKGY---WNNPPETTAAA--------TEDGWYRTGDLGYLD---EEGY- 239
Query: 1628 GAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----T 1682
+++ G + I + G +P ++E+ ++ H +AE AV
Sbjct: 240 --------------LYITGRSKDLIKVGGENVYPAEVESVLL-QHPAVAEAAVVGVPDED 284
Query: 1683 WTNLLVVVVEL 1693
+V V L
Sbjct: 285 RGERIVAFVVL 295
|
This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain. Length = 338 |
| >gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 7e-14
Identities = 76/336 (22%), Positives = 122/336 (36%), Gaps = 78/336 (23%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L LE A +R+ P L G+ LTY +L S + A L
Sbjct: 1 LADLLERAARRF-------PDRPALTFFGR---KLTYAELDELSDRFAAYLQ-------- 42
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ +K GDR+AL+ PN F A++G + AG V VP+ T R ++ L
Sbjct: 43 QLGVKKGDRVALMLPNCPQ--FPIAYFGILKAGAVVVPVNPLYTPR-----ELEHQLNDS 95
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAY 258
+V + ++F E + L+ D A
Sbjct: 96 GAKVLIV---------------AISF-----------EDALASGAPLPLPVELSPDDLAV 129
Query: 259 IEYTTDRDGSVMGVT-VTRAAMLSH---------CRALTQACHYTEGENMVCVLDFKRET 308
++YT G T V + AML+H A + + + L
Sbjct: 130 LQYTG-------GTTGVPKGAMLTHRNLVANVQQIAAWVKDLR-EGEDRFLTALPLFHIF 181
Query: 309 GLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAV-VKSRDLHWGLLATKD 367
GL ++L + G V +P P + ++ I +YR ++ V + L+ LL +
Sbjct: 182 GLTVNMLLGLRLGATNVLVP----NFRPINVLKEIKRYRFTIFPGVPT--LYNALLNHPE 235
Query: 368 HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSK 403
K SSLRL + G GA P + ++F +
Sbjct: 236 FKKYDFSSLRLCISG-GA-PLPVEVAERFEEKTGAP 269
|
This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 468 |
| >gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 6e-13
Identities = 77/326 (23%), Positives = 123/326 (37%), Gaps = 49/326 (15%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
LP L A +R+G A V LTY +L +R + A L
Sbjct: 7 LPELLARAARRFGDKE-----AYVFGDQ-----RLTYAELNARVRRAAAALA-------- 48
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ GDR+A+ PN+ +++ A G + AG V VP+ TR A + ++L
Sbjct: 49 ALGIGKGDRVAIWAPNS--PHWVIAALGALKAGAVVVPLN---TRYTAD--EAAYILARG 101
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFK-------------GWPKLTWFVTEHLAKTPKDW 245
D + L G+ +A + A + T+ T+ LA
Sbjct: 102 DAKALFVLGLFL-GVDYSATTRLPALEHVVICETEEDDPHTEKMKTF--TDFLAAGDPAE 158
Query: 246 APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFK 305
P + D A I +T+ G G +T +LS+ + TEG+ + F
Sbjct: 159 RA-PEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFF 217
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASV-AVVKSRDLHWGLLA 364
G V ++ G A +P L +P ++I R +V + ++ LL
Sbjct: 218 HVFGYKAGVNAPLMRG--ATILP--LPVFDPDEVFRLIETERITVLPGPPT--MYNSLLQ 271
Query: 365 TKDHKDISLSSLRLLLVGDGANPWSL 390
D LSSLRL + G + P +L
Sbjct: 272 HPDRSAEDLSSLRLAVTGAASMPVAL 297
|
Length = 513 |
| >gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 3e-12
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 901 NSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCL 956
+ G LT +L RA ++ LL++ I GD V L++P D I AFYGCL
Sbjct: 1 DGNGKPLYTLTYGKLWSRAAKIAYALLKKLGIKPGDRVVLVYPDPEDFIAAFYGCL 56
|
Dip2 proteins show sequence similarity to other members of the adenylate forming enzyme family, including insect luciferase, acetyl CoA ligases and the adenylation domain of nonribosomal peptide synthetases (NRPS). However, its function may have diverged from other members of the superfamily. In mouse embryo, Dip2 homolog A plays an important role in the development of both vertebrate and invertebrate nervous systems. Dip2A appears to regulate cell growth and the arrangement of cells in organs. Biochemically, Dip2A functions as a receptor of FSTL1, an extracellular glycoprotein, and may play a role as a cardiovascular protective agent. Length = 556 |
| >gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 1e-10
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 33/236 (13%)
Query: 1195 AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTI 1254
A LT +L +RA + A L GD VA++ P G + I A G L GA V I
Sbjct: 9 GAGTLTYGELARRANAIAAALRAAGVAP-GDLVAVVMPKGWEQIVAVLGILLAGAAYVPI 67
Query: 1255 RPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDM 1314
P P I+ + + VL++ + + ++ + V D D
Sbjct: 68 DPDQPA------ERRAAILARAGARAVLTDPGLAQPEEAPDLLVVAD----------DAA 111
Query: 1315 PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPS-RHI 1373
+ A + LAY+ F+ +TG G+ ++H A + + + P+ R +
Sbjct: 112 AAESPAPPPPRVDPDDLAYVIFTSGSTGEPKGVMITHRAAVNTILDVNRRFGVGPADRVL 171
Query: 1374 ALCLDPYCGLGFALWVLSSVY------SGHHSILIPPSEVEVNPALWLSAVSQYRV 1423
AL L F L SVY S ++++P +P W V ++ V
Sbjct: 172 AL-----SALHFDL----SVYDIFGALSAGAALVLPDEARRRDPDHWAELVQRHGV 218
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the TLM biosynthetic gene cluster from Streptoalloteichus that consists of nine NRPS genes; the N-terminal module of TlmVI (NRPS-5) and the starter module of BlmVI (NRPS-5) are comprised of the acyl CoA ligase (AL) and acyl carrier protein (ACP)-like domains, which are thought to be involved in the biosynthesis of the beta-aminoalaninamide moiety. Length = 476 |
| >gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 4e-10
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 36/287 (12%)
Query: 109 LSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCI 168
+LTY KLL+ SL L++ I + K G+ I ++ P++ + A +
Sbjct: 4 TGGSLTYRKLLTASL-----ALSRLIKK----LTKEGENIGIMLPSS--VAGALANLALL 52
Query: 169 FAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLK-----GLPKTAAGEVVA 223
AG VPV + T AG + + I+ +TS A L+ GL G +
Sbjct: 53 LAGKVPVMLN--FT---AGEEGLRSACKQAGIKTVITSRAFLEKLKLEGLVVLLEGVRIV 107
Query: 224 F--------KGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVT 275
+ KL F+ L D PA I +T+ +G GV ++
Sbjct: 108 YLEDLRAKISKADKLKAFLAAKLPPALL-RLFLAGAKPDDPAVILFTSGSEGLPKGVVLS 166
Query: 276 RAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVN 335
+L++ + + ++ L GL ++L +L G+ VY P L +
Sbjct: 167 HRNLLANIDQIAAVIDLNTEDVLLGALPLFHAFGLTVTLLLPLLTGLRVVYYPNPL---D 223
Query: 336 PASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVG 382
++I Y+A++ A H + SSLRL++ G
Sbjct: 224 AKKIAELIRDYKATILC--GTPTFLRGYARNAHPE-DFSSLRLVVAG 267
|
Acyl-acyl carrier protein synthase (Aas) is a membrane protein responsible for a minor pathway of incorporating exogenous fatty acids into membrane phospholipids. Its in vitro activity is characterized by the ligation of free fatty acids between 8 and 18 carbons in length to the acyl carrier protein sulfydryl group (ACP-SH) in the presence of ATP and Mg2+. However, its in vivo function is as a 2-acylglycerophosphoethanolamine (2-acyl-GPE) acyltransferase. The reaction occurs in two steps: the acyl chain is first esterified to acyl carrier protein (ACP) via a thioester bond, followed by a second step where the acyl chain is transferred to a 2-acyllysophospholipid, thus completing the transacylation reaction. This model represents the C-terminal domain of the enzyme, which belongs to the class I adenylate-forming enzyme family, including acyl-CoA synthetases. Length = 489 |
| >gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 5e-10
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 886 WRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPG 945
RAA+ + +T L + LT ++L +RA + A L GD V L+ PPG
Sbjct: 1 ARAAAQPDAR-YTFLFDDDDEEETLTYAELDRRARAIAARLQALGA--PGDRVLLLAPPG 57
Query: 946 IDLICAFYGCL 956
+D + AF+GCL
Sbjct: 58 LDFVAAFFGCL 68
|
FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin. Length = 547 |
| >gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 7e-10
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 836
++ +L+ A + L G LT +L +RA R+ A L + GD VA
Sbjct: 13 LASLLERAARRNPDRPALIFLGRGGR----LTYRELDRRANRLAAALQALG-VKPGDRVA 67
Query: 837 LIFPPGIDLICAFYGCLYVGAVPVTIRPP 865
++ P + + AF L GAV V + P
Sbjct: 68 ILLPNSPEFLIAFLAALRAGAVAVPLNPR 96
|
Length = 534 |
| >gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 9e-10
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 1004 LHD-AVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNL------LVVV 1056
LHD ++V G L + I++RG ++P DIE +V RAH + A ++ LVVV
Sbjct: 427 LHDGELYVTGRLKDLIIIRGRNHYPQDIEATVERAHPALRPGAAAAFSVDGDGEERLVVV 486
Query: 1057 VELDGNES--EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1114
E+ + L + AV EH + V+V PG +P S G+ QR R+ +L
Sbjct: 487 AEVRRRGLPADLAALAEAIRAAVAREHGVAPADVVLVRPGTLPKTSSGKIQRRACRELYL 546
Query: 1115 A 1115
A
Sbjct: 547 A 547
|
FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin. Length = 547 |
| >gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 1e-09
Identities = 85/487 (17%), Positives = 166/487 (34%), Gaps = 84/487 (17%)
Query: 1200 TCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259
T +L +RA R+ L + GD VA++ +L+ A L GA V + P +P
Sbjct: 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYP 60
Query: 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKL 1319
+ I++ + + L+L++ + L V + + DD P
Sbjct: 61 A------ERLAFILEDAGARLLLTDSALASRL--AGLVLPVILLDPLELAALDDAPAPPP 112
Query: 1320 AALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDP 1379
P LAY+ ++ +TG G+ ++H ++ +L + L
Sbjct: 113 PDAPSGPDD--LAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLA-RRYGLDPDDRVLQFAS 169
Query: 1380 YCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKG 1439
+ ++ +G ++ P E + AL + ++++ V + ++ L
Sbjct: 170 LSFDASVEEIFGALLAGATLVVPPEDEERDDAALLAALIAEHPVTVLNLTPSLLALL--- 226
Query: 1440 LSGSIPQLKARNIALGCVRTCVVVAEERP-----RIHLTSAFSKLFSALGLSPRAVSTSF 1494
A AL +R ++ E R ++L + G + V ++
Sbjct: 227 -------AAALPPALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTA 279
Query: 1495 GCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVII 1554
+ A P + G+ L ++ +
Sbjct: 280 -----TLVDPDDAPRESPVPI----------------------------GRPLANTRLYV 306
Query: 1555 ANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGE-LYARTG 1613
+ + + +GE+++ P A GY A++F G G LY RTG
Sbjct: 307 LDDDLR-PVPVGVVGELYIGGPGVARGYL---NRPELTAERFVPDPFAGGDGARLY-RTG 361
Query: 1614 YLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHK 1673
L R P G + +G +D+ + +RG R +IE + + H
Sbjct: 362 DLV---RYLPDGN---------------LEFLGRIDDQVKIRGYRIELGEIE-AALLRHP 402
Query: 1674 KIAECAV 1680
+ E V
Sbjct: 403 GVREAVV 409
|
This model represents a domain responsible for the specific recognition of amino acids and activation as adenylyl amino acids. The reaction catalyzed is aa + ATP -> aa-AMP + PPi. These domains are usually found as components of multi-domain non-ribosomal peptide synthetases and are usually called "A-domains" in that context (for a review, see ). A-domains are almost invariably followed by "T-domains" (thiolation domains, pfam00550) to which the amino acid adenylate is transferred as a thiol-ester to a bound pantetheine cofactor with the release of AMP (these are also called peptide carrier proteins, or PCPs. When the A-domain does not represent the first module (corresponding to the first amino acid in the product molecule) it is usually preceded by a "C-domain" (condensation domain, pfam00668) which catalyzes the ligation of two amino acid thiol-esters from neighboring modules. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group. Length = 409 |
| >gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 2e-09
Identities = 20/52 (38%), Positives = 24/52 (46%)
Query: 1123 IWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTS 1174
IWV S NA+ Y+ L G + F G Y RTG LGF+ TS
Sbjct: 383 IWVNSSANATSYYGLTGMTKNTFEVFPNSSSDGIGENPYVRTGLLGFVGPTS 434
|
Dip2 proteins show sequence similarity to other members of the adenylate forming enzyme family, including insect luciferase, acetyl CoA ligases and the adenylation domain of nonribosomal peptide synthetases (NRPS). However, its function may have diverged from other members of the superfamily. In mouse embryo, Dip2 homolog A plays an important role in the development of both vertebrate and invertebrate nervous systems. Dip2A appears to regulate cell growth and the arrangement of cells in organs. Biochemically, Dip2A functions as a receptor of FSTL1, an extracellular glycoprotein, and may play a role as a cardiovascular protective agent. Length = 556 |
| >gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 3e-09
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 808 TCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 867
T +L +RA R+ A L + GD VA++ P + + A L GA V + P P
Sbjct: 1 TYRELDERANRLAAALRALG-VGPGDRVAILLPNSPEWVVAILAVLKAGAAYVPLDPSLP 59
Query: 868 Q 868
Sbjct: 60 A 60
|
Length = 412 |
| >gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 3e-09
Identities = 55/263 (20%), Positives = 87/263 (33%), Gaps = 59/263 (22%)
Query: 111 ITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFA 170
+ TY +L + +VA LL + LK GDR+A + N+D + + C A
Sbjct: 35 RSWTYAELDAAVNRVAAALL--------DLGLKKGDRVAALGHNSD--AYALLWLACARA 84
Query: 171 GIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKL 230
G V VP+ LT + + ++L + L A A V +
Sbjct: 85 GAVHVPVNFMLTGEE-----LAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLV 139
Query: 231 T--------WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVT-VTRAAMLS 281
W A+ P L DD A I YT+ G + + AML+
Sbjct: 140 LGGREAPGGWLDFADWAEAGSVAEPDVELADDDLAQILYTS-------GTESLPKGAMLT 192
Query: 282 HCRALTQ-------ACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALM-- 332
H RAL A + + + L L+H + PY +
Sbjct: 193 H-RALIAEYVSCIVAGDMSADDIPLHALP------LYHCA------QLDVFLGPYLYVGA 239
Query: 333 ------KVNPASWMQMITKYRAS 349
+P ++ I R +
Sbjct: 240 TNVILDAPDPELILRTIEAERIT 262
|
Length = 523 |
| >gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 4e-09
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 781 LKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFP 840
L+ RAA T + + L +L+ L RA + A L RA GD L+FP
Sbjct: 15 LQRRAAQTPDRLALRFLADDPGEGVVLSYRDLDLRARTIAAALQARASF--GDRAVLLFP 72
Query: 841 PGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQ 878
G D + AF+GCLY G + V PP ++ HQ
Sbjct: 73 SGPDYVAAFFGCLYAGVIAVPAYPP-----ESARRHHQ 105
|
Length = 4334 |
| >gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 4e-09
Identities = 75/331 (22%), Positives = 122/331 (36%), Gaps = 47/331 (14%)
Query: 239 AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENM 298
A T + A PA ++ T G+ ++ A+LS+ R L ++
Sbjct: 138 AHTNRS-ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDV 196
Query: 299 VCV-LDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRD 357
C L + GL +LT+ L G P +P W+ ++ RA+ + + +
Sbjct: 197 GCSWLPLYHDMGL-AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRAT--LTAAPN 253
Query: 358 LHWGLLATKDHK--DISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPC-- 413
+ L+ + D+ L +LR+ L +G P ++F + G A P
Sbjct: 254 FAYNLIGKYARRVSDVDLGALRVAL--NGGEPVDCDGFERFATAMAPFGFDAGAAAPSYG 311
Query: 414 ASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473
+ S C V+V PG GL V D + + G +PG
Sbjct: 312 LAESTC-AVTVPVPG--------------IGLRVDEVTTDDGSGARRHAV--LGNPIPGM 354
Query: 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDT 533
+ + D + + E+GEI + S Y G + D
Sbjct: 355 EVRISPGDGAAGV-AGREIGEIEIRGASMMSGYLG-----------------QAPIDPDD 396
Query: 534 YTRSGLLGFLGPGGLVFVCGSRDGLMTVTGR 564
+ +G LG+L GGLV VCG L+TV GR
Sbjct: 397 WFPTGDLGYLVDGGLV-VCGRAKELITVAGR 426
|
Length = 525 |
| >gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-08
Identities = 56/290 (19%), Positives = 97/290 (33%), Gaps = 39/290 (13%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
LTYG L ++A L + GDR+A+ PN+ + A G
Sbjct: 40 ELTYGDLRREVARLANAL--------KDLGGVKGDRVAIYMPNS--PEAVIALLATARIG 89
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLP--------KTAAGEVVA 223
+P + ++ + + +V + D + VV
Sbjct: 90 AIPAVVS-----PGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVV 144
Query: 224 FKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYT---TDRDGSVMGVTVTRAAML 280
W+ E + K + + +P DD P ++ YT T G G+ + L
Sbjct: 145 VPR--LGLWY-DEAVEKASEKFEFEPLPADD-PLFLLYTSGTT---GKPKGIVHSHGGYL 197
Query: 281 SHCRALTQACH-YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASW 339
R + G+ D GLW+SV + + +G + +P
Sbjct: 198 VEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGA-TTVLYDGRPFYSPERL 256
Query: 340 MQMITKYRASVAVVKSRDLHWGLLATKDH-KDISLSSLRLLL-VGDGANP 387
+ + KY+ V + + L + LSSLR+L G+ NP
Sbjct: 257 WEALEKYK--VTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNP 304
|
Length = 528 |
| >gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 4e-08
Identities = 103/492 (20%), Positives = 177/492 (35%), Gaps = 95/492 (19%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT ++L + R+ A L R GD V L+ P ++ F L GAV T P
Sbjct: 33 LTYAELERLVRRLAAGLAARG-GRKGDVVLLLSPNSLEFPVVFLAVLSAGAVVTTANP-- 89
Query: 1259 PQNLQTTLPTVRMI---VDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMP 1315
L T I V S + L ++ + + L S VV + S D
Sbjct: 90 -------LYTPAEIAKQVKDSGAKLAITTSELAEKLASLALEPVVLLDSADDGSAAIDDL 142
Query: 1316 KKKLAALYRAP--TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHI 1373
+ +A L +S TTG G+ ++H + + + R
Sbjct: 143 LFADEPEPPVVVIKQDDVAALPYSSGTTGRSKGVMLTHRNLIANVAQLVAGEGPNFDRED 202
Query: 1374 A-LCLDPYCGL-GFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYG 1431
LC+ P + G + +L+ + G +++P ++E +L+A+ +Y+V
Sbjct: 203 VTLCVLPMFHIYGLTVILLALLRLGATVVVMPRFDLE----KFLAAIEKYKVTHLPVV-- 256
Query: 1432 VMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH--LTSAFSKLFSALGLSPRA 1489
P I L V+ +V + + + A + LG +
Sbjct: 257 -------------PP-----IVLALVKHPIVDKYDLSSLKQIGSGA-----APLG---KE 290
Query: 1490 VSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPG 1549
++ +F R QG E S V + + GS G+L+P
Sbjct: 291 LAEAFRARFPGVELGQGYGMTESSPVT----TMCPVPEKDPKPGS--------VGRLVPN 338
Query: 1550 VKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELY 1609
V+ I +PET + GE+WV+ P GY + A+ + +
Sbjct: 339 VEAKIVDPETGESLPPNQPGELWVRGPQVMKGYL---NNPEATAETI--------DKDGW 387
Query: 1610 ARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA-VFVVGALDETIMLRGMRYHPIDIENSV 1668
TG LG+ D +F+V L E I +G + P ++E ++
Sbjct: 388 LHTGDLGYFD-------------------EDGYLFIVDRLKELIKYKGFQVAPAELE-AL 427
Query: 1669 MRAHKKIAECAV 1680
+ +H +IA+ AV
Sbjct: 428 LLSHPEIADAAV 439
|
4-Coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids. Length = 504 |
| >gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 5e-08
Identities = 101/478 (21%), Positives = 167/478 (34%), Gaps = 92/478 (19%)
Query: 1202 SQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGA----VPVTIRPP 1257
++H RAE V A LL+R + V L+ P ++L+ A G GA +P +R
Sbjct: 35 PEVHGRAENVAARLLDRDRPGA---VGLVGEPTVELVAAIQGAWLAGAAVSILPGPVRGA 91
Query: 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKK 1317
T + V VLS+ + ++ L++ ++S V D
Sbjct: 92 DDGRWADATLTRFAGIGVR---TVLSHGSHLERLRAVDSSVTVH--------DLATAAHT 140
Query: 1318 KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCL 1377
+A P + A L + +TG +S AV S R + L + +
Sbjct: 141 NRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSW 200
Query: 1378 DP-YCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFC---SYGVM 1433
P Y +G A ++L++ +G L P + +P WLS +S R T +Y ++
Sbjct: 201 LPLYHDMGLA-FLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLI 259
Query: 1434 ELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP-RIHLTSAFSKLFSALGLSPRAVST 1492
G + ++ LG +R + E P F+ + G A +
Sbjct: 260 -----GKYAR----RVSDVDLGALRVALNGGE--PVDCDGFERFATAMAPFGFDAGAAAP 308
Query: 1493 SFG-----CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL 1547
S+G C V + P P LR D V+ + +L G +
Sbjct: 309 SYGLAESTCAV---------TVPVPGI------GLRVDEVTTDDGSGARRHAVL--GNPI 351
Query: 1548 PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGE 1607
PG++V I+ + +GEI ++ SGY G
Sbjct: 352 PGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYL---GQAPIDPDD------------ 396
Query: 1608 LYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIE 1665
+ TG LG+L + + V G E I + G P +IE
Sbjct: 397 -WFPTGDLGYL-------------------VDGGLVVCGRAKELITVAGRNIFPTEIE 434
|
Length = 525 |
| >gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD | Back alignment and domain information |
|---|
Score = 55.2 bits (134), Expect = 2e-07
Identities = 98/495 (19%), Positives = 169/495 (34%), Gaps = 130/495 (26%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT ++L + ++R A L + + GD VAL+ P A++G L GAV V
Sbjct: 25 LTYAELDELSDRFAAYLQQ-LGVKKGDRVALMLPNCPQFPIAYFGILKAGAVVV------ 77
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
P N T + L A ++ S+ L +
Sbjct: 78 PVNPLYTPRELEHQ------------------LNDSGAKVLIVAISFEDALASGAPLPLP 119
Query: 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSH----AAVTSLCRSMKLACELYPSRHIA 1374
+ + LA L ++ TTG+ G ++H A V + +K +L
Sbjct: 120 -----VELSPDDLAVLQYTGGTTGVPKGAMLTHRNLVANVQQIAAWVK---DLREGEDRF 171
Query: 1375 LCLDP-YCGLGFALWVLSSVYSGHHSILIP-PSEVEVNPALWLSAVSQYRVRDTFCSYGV 1432
L P + G + +L + G ++L+P + V L + +YR F GV
Sbjct: 172 LTALPLFHIFGLTVNMLLGLRLGATNVLVPNFRPINV-----LKEIKRYRF-TIFP--GV 223
Query: 1433 MELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVST 1492
L + + + + +R C+ L ++ F
Sbjct: 224 PTL----YNALLNHPEFKKYDFSSLRLCISGGAP-----LPVEVAERFEEK--------- 265
Query: 1493 SFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKV 1552
G + ++G E S V N + GS G LPG +V
Sbjct: 266 -TGAPL-----VEGYGLTETSPV-----TTVNPLDGERKPGS--------IGLPLPGTEV 306
Query: 1553 IIANPETK----GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGEL 1608
I + E G+ +GE+ V+ P GY++ +E+ L G
Sbjct: 307 KIVDDEGNELPPGE-----VGELVVRGPQVMKGYWNR-PEETAEV------LTDG----- 349
Query: 1609 YARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA---VFVVGALDETIMLRGMRYHPIDIE 1665
+ RTG +G++ D ++V + I++ G +P +IE
Sbjct: 350 WLRTGDIGYM---------------------DEDGYFYIVDRKKDMIIVGGFNVYPREIE 388
Query: 1666 NSVMRAHKKIAECAV 1680
V+ +H + E AV
Sbjct: 389 E-VLYSHPAVLEAAV 402
|
This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 468 |
| >gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 4e-07
Identities = 47/231 (20%), Positives = 93/231 (40%), Gaps = 23/231 (9%)
Query: 1195 AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTI 1254
Q LT ++L RA R+ A LL + G+ VA++ ++L+ A L GA V +
Sbjct: 249 GGQQLTYAELDARANRL-ARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVPL 307
Query: 1255 RPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDM 1314
P +P + I++ S+ L+L+ ++ L DD
Sbjct: 308 DPLYPAE------RLAYILEDSRPTLLLTQAHLRVDDVGLP------------GLALDDA 349
Query: 1315 PKKKLAA--LYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRH 1372
+ + +A + LAY+ ++ +TG G+++ H A+ +L L +
Sbjct: 350 LSEIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGL-DADD 408
Query: 1373 IALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 1423
L L + ++ G +++ P+ ++V+PA L + +
Sbjct: 409 RVLALASLSFDASVFEIFGALLEG-ARLVLAPALLQVDPAALLELLEAQGI 458
|
Length = 642 |
| >gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 5e-07
Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 39/295 (13%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
TLTY L R L +A L L G+R+A+ + + A +G AG
Sbjct: 25 TLTYAALSERVLALASGLRGL--------GLARGERVAIYLDKR--LETVTAMFGAALAG 74
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----EVVAFKGW 227
V VPI PL + +Q+ +L C++++ +TS L L G + G
Sbjct: 75 GVFVPIN-PLLKA----EQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLIIVGD 129
Query: 228 PKLTWFVTEHLAKTPKDWA---------PQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAA 278
P H + P W P + D A I YT+ G GV ++
Sbjct: 130 PAHA--SEGHPGEEPASWPKLLALGDADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRN 187
Query: 279 MLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPAS 338
+++ +++ + ++ VL + G + + T+ G V Y L P
Sbjct: 188 LVAGAQSVATYLENRPDDRLLAVLPLSFDYGF-NQLTTAFYVGATVVLHDYLL----PRD 242
Query: 339 WMQMITKYRAS-VAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSS 392
++ + K+ + +A V W LA D + + SLR L GA P + S
Sbjct: 243 VLKALEKHGITGLAAVPPL---WAQLAQLDWPESAAPSLRYLTNSGGAMPRATLS 294
|
This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system , specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present. Length = 517 |
| >gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 6e-07
Identities = 100/519 (19%), Positives = 172/519 (33%), Gaps = 164/519 (31%)
Query: 1193 RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPV 1252
Q LT +LH A R +L ++ GD V L+ P +L+ AF CL GAV V
Sbjct: 5 YCGEQSLTYRELHDLANRFANVLRALG-VSPGDRVLLLLPDSPELVAAFLACLKAGAVAV 63
Query: 1253 TIRPP-HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDT 1311
+ P PQ+L ++ D ++LV
Sbjct: 64 ALNPLLTPQDL------EHILDDSGAALLVTE---------------------------- 89
Query: 1312 DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSR 1371
A+ +AY ++ TTG G+ H R E +
Sbjct: 90 ----------------ADDIAYWLYTSGTTGKPKGVMHRH-------RDPLTFAEAFARE 126
Query: 1372 HIALCLDPYC----------GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQY 1421
+ L GLG +L ++SG ++L+P P L ++++
Sbjct: 127 LLGLQPGDRIFSSSKLFFAYGLGNSLLF--PLFSGASAVLLPG---WPTPEAVLDLLARH 181
Query: 1422 RVRDTF---CSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSK 1478
R F Y + + VR CV SA
Sbjct: 182 RPTVLFGVPALYRAL----------LESGAGSAPLFRSVRLCV------------SAGEA 219
Query: 1479 LFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSL 1538
L + L + + G + L G S E +++ ++R G+
Sbjct: 220 LPAGLA---ERWAEATGIEI-----LDGIGSTEVLHIFI------SNRPGAARPGT---- 261
Query: 1539 CLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSA 1598
+G+ +PG + + + + + +G++WV+ P A GY++L ++++
Sbjct: 262 ----TGRPVPGYEARLVDESGR-EVPAGTVGDLWVRGPSLAPGYWNL-PEKTQ------R 309
Query: 1599 RLVTG--NTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRG 1656
L G TG+ ++R G G D+ I + G
Sbjct: 310 TLRDGWLRTGDRFSR----------DADG---------------WYRYQGRADDMIKVSG 344
Query: 1657 MRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDG 1695
P+++E + + H +AE AV V V + DG
Sbjct: 345 QWVSPLEVE-AALGEHPAVAEAAV-------VAVPDEDG 375
|
This family contains benzoate CoA ligase (BCL) and related ligases that catalyze the acylation of benzoate derivatives, 2-aminobenzoate and 4-hydroxybenzoate. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Xenobiotic aromatic compounds are also a major class of man-made pollutants. Some bacteria use benzoate as the sole source of carbon and energy through benzoate degradation. Benzoate degradation starts with its activation to benzoyl-CoA by benzoate CoA ligase. The reaction catalyzed by benzoate CoA ligase proceeds via a two-step process; the first ATP-dependent step forms an acyl-AMP intermediate, and the second step forms the acyl-CoA ester with release of the AMP. Length = 436 |
| >gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 8e-07
Identities = 98/481 (20%), Positives = 163/481 (33%), Gaps = 87/481 (18%)
Query: 76 PSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPIN 135
P PR QR +AP A + + L+Y +L SR+ ++A+ L
Sbjct: 1996 PEAYPRGPGVH-QRIAEQAARAPEAIAVVFGDQ---HLSYAELDSRANRLAHRLR----- 2046
Query: 136 RTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG--IVPVPIEVPLTRRDAGSQQIGF 193
+ R+A+ + + + A + AG VP+ P R + +
Sbjct: 2047 ---ARGVGPEVRVAIAAERSFEL--VVALLAVLKAGGAYVPLDPNYPAER-------LAY 2094
Query: 194 LLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTD 253
+L + LT L+ LP A G +L A P D AP +L
Sbjct: 2095 MLEDSGAALLLTQRHLLERLPLPA--------GVARLPLDRDAEWADYP-DTAPAVQLAG 2145
Query: 254 DTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET--GLW 311
+ AY+ YT+ G GV V+ A+++HC+A + + + C L F + G
Sbjct: 2146 ENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPAD---CELQFMSFSFDGAH 2202
Query: 312 HSVLTSVLNGMHAVYIPYALMKVNPAS-WM--QMI-TKYRASVAVVKSRDLHWGLLATKD 367
+LNG A + + W Q+ R V ++ ++ LA
Sbjct: 2203 EQWFHPLLNG--------ARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHA 2254
Query: 368 HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRP 427
+D ++R+ G A +S + LRP +
Sbjct: 2255 ERDGRPPAVRVYCFGGEA--VPAASLRL-----AWEALRPVYL----------------- 2290
Query: 428 GRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLC 487
N G ++ L + D + + G I +D+ L
Sbjct: 2291 ----FNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGN-RRAYI-----LDADLNLL 2340
Query: 488 KTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTAL--SQD--TYTRSGLLGFL 543
GE+ + G Y PGL+ F P A G L + D Y G++ +L
Sbjct: 2341 APGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYL 2400
Query: 544 G 544
G
Sbjct: 2401 G 2401
|
Length = 5163 |
| >gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 2e-06
Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
+L+YG+L ++ ++ L + R +R+ L+ D ++F AF G I AG
Sbjct: 30 SLSYGELEAQVRRLGAALRRLGVKRE--------ERVLLLM--LDGVDFPIAFLGAIRAG 79
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGE------VVAFK 225
IVPV + LT + ++L +V S L + K A G+ V
Sbjct: 80 IVPVALNTLLT-----ADDYAYMLEDSRARVVFVSGELLP-VIKAALGKSPHLEHRVVVG 133
Query: 226 GWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGV 272
+ E LA + + P DD PA+ Y++ G GV
Sbjct: 134 RPEAGEVQLAELLATESEQFKPAATQADD-PAFWLYSSGSTGMPKGV 179
|
Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases. Length = 508 |
| >gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 3e-06
Identities = 55/271 (20%), Positives = 100/271 (36%), Gaps = 30/271 (11%)
Query: 114 TYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIV 173
TY +L R+ ++A L + + GDR+A++ + + A + AG
Sbjct: 1 TYRELDERANRLARHLR-------AAGGVGPGDRVAVLLERS--AELVVAILAVLKAGAA 51
Query: 174 PVPIEV--PLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLT 231
VP++ P R F+L ++ LT A L ++ L
Sbjct: 52 YVPLDPAYPAERLA-------FILEDAGARLLLTDSALASRLAGLVLPVIL-------LD 97
Query: 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH 291
L P P D AY+ YT+ G GV VT ++++ L +
Sbjct: 98 PLELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRYG 157
Query: 292 YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA 351
+ ++ + + + ++L G V P + + A +I ++ V
Sbjct: 158 LDPDDRVLQFASLSFDASVE-EIFGALLAGATLVVPPEDEERDDAALLAALIAEH--PVT 214
Query: 352 VVKSRDLHWGLLATKDHKDISLSSLRLLLVG 382
V+ LLA +L+SLRL+++G
Sbjct: 215 VLNLTPSLLALLA--AALPPALASLRLVILG 243
|
This model represents a domain responsible for the specific recognition of amino acids and activation as adenylyl amino acids. The reaction catalyzed is aa + ATP -> aa-AMP + PPi. These domains are usually found as components of multi-domain non-ribosomal peptide synthetases and are usually called "A-domains" in that context (for a review, see ). A-domains are almost invariably followed by "T-domains" (thiolation domains, pfam00550) to which the amino acid adenylate is transferred as a thiol-ester to a bound pantetheine cofactor with the release of AMP (these are also called peptide carrier proteins, or PCPs. When the A-domain does not represent the first module (corresponding to the first amino acid in the product molecule) it is usually preceded by a "C-domain" (condensation domain, pfam00668) which catalyzes the ligation of two amino acid thiol-esters from neighboring modules. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group. Length = 409 |
| >gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 4e-06
Identities = 74/339 (21%), Positives = 128/339 (37%), Gaps = 66/339 (19%)
Query: 111 ITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFA 170
+L+Y +L +A L + R IAL N+ I+++ A C+ A
Sbjct: 1 DSLSYQQLWQEVDLLAEQLRALGVKR-----------IALALDNS--IDWVIADLACLQA 47
Query: 171 GIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKL 230
GIV +PI + QQ LL + ++ D +A A G
Sbjct: 48 GIVCIPIPHFFSA-----QQTQHLLNDAGADLLISDDP----DAASALHTPFATLGEDLY 98
Query: 231 TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC 290
L + L T A I YT+ G GV ++ AA+ + ++L +A
Sbjct: 99 IA-----LRPSANP----VELPAGT-AKITYTSGSTGQPKGVCLSAAALETVAQSLAEAI 148
Query: 291 HYTEGENMVCVLDF----KRETGLWHSVL---TSVLNGMHAVYIPYALM---KVNPASWM 340
E E +C+L + G++ +L T +L + + L ++PA ++
Sbjct: 149 AILEPERHLCLLPLATLLENIAGVYAPLLMGATVILVPLAEL----GLSGSSGLDPAQFV 204
Query: 341 QMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGA-NPWSLSSCDQF-LS 398
+++++ ++ + L L+A + + SLR + VG +P L L
Sbjct: 205 AALSRWQPHSLILVPQLLM-ALVAAVEQGPLPPESLRFVAVGGARVSPSLLQRARALGLP 263
Query: 399 VFQSKGLRPDAICPCASSSECLTV------SVRRPGRAG 431
V++ GL SEC +V RPG G
Sbjct: 264 VYEGYGL-----------SECASVVSLNTPGADRPGSVG 291
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 448 |
| >gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 5e-06
Identities = 43/180 (23%), Positives = 64/180 (35%), Gaps = 23/180 (12%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
+LTYG+L + L I R +R+ L+ D F AF+G I G
Sbjct: 30 SLTYGELQEEVNRWGNALRELGIER--------ENRVLLILL--DTPEFPTAFWGAIKIG 79
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGE------VVAFK 225
VPVPI LT + L +V + S+ + L K A + V+
Sbjct: 80 AVPVPINTLLT-----PDDYRYYLNDSRARVLVISEELWEVL-KPALQKDPHLRHVIVVG 133
Query: 226 GWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRA 285
G + +A ++ DD A+ Y++ G GV ML A
Sbjct: 134 GAGPGALSYAQLIATAAEELEAAATSADD-MAFWLYSSGSTGRPKGVVHLHHDMLVTAEA 192
|
Benzoate CoA ligase and 4-hydroxybenzoate-coenzyme A ligase catalyze the first activating step for benzoate and 4-hydroxybenzoate catabolic pathways, respectively. Although these two enzymes share very high sequence homology, they have their own substrate preference. The reaction proceeds via a two-step process; the first ATP-dependent step forms the substrate-AMP intermediate, while the second step forms the acyl-CoA ester, releasing the AMP. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Some bacteria can use benzoic acid or benzenoid compounds as the sole source of carbon and energy through degradation. Benzoate CoA ligase and 4-hydroxybenzoate-Coenzyme A ligase are key enzymes of this process. Length = 506 |
| >gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 5e-06
Identities = 48/248 (19%), Positives = 86/248 (34%), Gaps = 34/248 (13%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTI---R 1255
LT L + R+ L + + GD VA+ P + + A +GA+P +
Sbjct: 41 LTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPAVVSPGL 99
Query: 1256 PPHPQNLQTTLPTVRMIVDVSKSVLVLSNQ------NVIKLLKSKEASNVVDIKSWPTIL 1309
V + +++++ I LL+ +A + L
Sbjct: 100 SAE---------AVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGL 150
Query: 1310 DTDDMPKKKLAALYRAPT-AEMLAYLDFSVSTTGMLAGIKMSHAA-VTSLCRSMKLACEL 1367
D+ +K P A+ +L ++ TTG GI SH + + K +L
Sbjct: 151 WYDEAVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDL 210
Query: 1368 YPS-RH--IALCLDPYCGLGFALWVLSSVYSGHHS---ILIPPSEVEVNPALWLSAVSQY 1421
P R + DP G+ + SV+S S ++ +P A+ +Y
Sbjct: 211 LPGDRFWNSS---DP----GWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKY 263
Query: 1422 RVRDTFCS 1429
+V S
Sbjct: 264 KVTIFGTS 271
|
Length = 528 |
| >gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 5e-06
Identities = 57/285 (20%), Positives = 93/285 (32%), Gaps = 82/285 (28%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
+TY +LL ++A L E ++ GDR+AL N+ F+ A+Y + AG
Sbjct: 1 VITYAELLELVDRLAGLL--------QEKGVRKGDRVALYMQNS--PQFVIAYYAILRAG 50
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLT 231
V VP+ P+ R ++ +L +V +
Sbjct: 51 AVVVPVN-PMNREA----ELEHILNDSGARVLIVGSEL---------------------- 83
Query: 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH 291
D A I YT+ G G T +L+ A
Sbjct: 84 ----------------------DDVAVIPYTSGTTGLPKGCMHTHRTVLATAAASAAWSG 121
Query: 292 YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALM-KVNPASWMQMITKYRASV 350
T ++ L G+ S+ + G L+ + + + + I +YR +
Sbjct: 122 LTPDSVLLAFLPLFHVAGMQGSMNAPIYTG-----ATLVLLTRWDREAAARAIERYRVT- 175
Query: 351 AVVKSRDLHWG--------LLATKDHKDISLSSLRLLLVGDGANP 387
HW LLA D LSSL+++ G A P
Sbjct: 176 --------HWTNIVTMVVDLLAHPRFADYDLSSLKVVGGGGAALP 212
|
The members of this family are putative long-chain fatty acyl-CoA synthetases, which catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. Fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. Length = 430 |
| >gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 6e-06
Identities = 60/305 (19%), Positives = 105/305 (34%), Gaps = 50/305 (16%)
Query: 114 TYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIV 173
TY +L R ++A L +K GDR+A+ N+ +L A++ G V
Sbjct: 33 TYAELDERVNRLANALR--------ALGVKKGDRVAVFDWNSH--EYLEAYFAVPKIGAV 82
Query: 174 PVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSD------ACLKGLPKTAAGEVVAFKGW 227
PI + L ++I ++L + +V L A + T V+
Sbjct: 83 LHPINIRLK-----PEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRT-VIVEGDG 136
Query: 228 PKLTWFVTEH-----LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSH 282
P LA P + ++ A + YT+ G GV ++ + H
Sbjct: 137 PAAPLAPEVGEYEELLAAASDT-FDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLH 195
Query: 283 CRALTQACHYTEGE-NMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQ 341
A+ + + +V V F W +++ G V + +P + +
Sbjct: 196 SLAVCAWLKLSRDDVYLVIVPMF--HVHAWGLPYLALMAGAKQVIPR----RFDPENLLD 249
Query: 342 MITKYRASVAVVKSRDLH-----W-GLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQ 395
+I R + W LL + SSLRL++ G GA + +
Sbjct: 250 LIETERVTFF-------FAVPTIWQMLLKAPRAYFVDFSSLRLVIYG-GA-ALPPALLRE 300
Query: 396 FLSVF 400
F F
Sbjct: 301 FKEKF 305
|
Length = 521 |
| >gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 9e-06
Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 32/179 (17%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
TLTYG+L R+ +A L + + GD +A+V P + A G + AG
Sbjct: 12 TLTYGELARRANAIAAAL--------RAAGVAPGDLVAVVMPKG--WEQIVAVLGILLAG 61
Query: 172 IVPVPIEV--PLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPK 229
VPI+ P RR A +L + LT + P
Sbjct: 62 AAYVPIDPDQPAERRAA-------ILARAGARAVLTDPGLAQPEE------------APD 102
Query: 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ 288
L + A P PR+ D AY+ +T+ G GV +T A ++ + +
Sbjct: 103 LLVVADDAAAAESPA-PPPPRVDPDDLAYVIFTSGSTGEPKGVMITHRAAVNTILDVNR 160
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the TLM biosynthetic gene cluster from Streptoalloteichus that consists of nine NRPS genes; the N-terminal module of TlmVI (NRPS-5) and the starter module of BlmVI (NRPS-5) are comprised of the acyl CoA ligase (AL) and acyl carrier protein (ACP)-like domains, which are thought to be involved in the biosynthesis of the beta-aminoalaninamide moiety. Length = 476 |
| >gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-05
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 884 LKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFP 943
L+ RAA T + + L +L+ L RA + A L RA GD L+FP
Sbjct: 15 LQRRAAQTPDRLALRFLADDPGEGVVLSYRDLDLRARTIAAALQARASF--GDRAVLLFP 72
Query: 944 PGIDLICAFYGCL 956
G D + AF+GCL
Sbjct: 73 SGPDYVAAFFGCL 85
|
Length = 4334 |
| >gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 1e-05
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 803 AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTI 862
Q LT +LH A R +L ++ GD V L+ P +L+ AF CL GAV V +
Sbjct: 7 GEQSLTYRELHDLANRFANVLRALG-VSPGDRVLLLLPDSPELVAAFLACLKAGAVAVAL 65
Query: 863 RP 864
P
Sbjct: 66 NP 67
|
This family contains benzoate CoA ligase (BCL) and related ligases that catalyze the acylation of benzoate derivatives, 2-aminobenzoate and 4-hydroxybenzoate. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Xenobiotic aromatic compounds are also a major class of man-made pollutants. Some bacteria use benzoate as the sole source of carbon and energy through benzoate degradation. Benzoate degradation starts with its activation to benzoyl-CoA by benzoate CoA ligase. The reaction catalyzed by benzoate CoA ligase proceeds via a two-step process; the first ATP-dependent step forms an acyl-AMP intermediate, and the second step forms the acyl-CoA ester with release of the AMP. Length = 436 |
| >gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 2e-05
Identities = 54/306 (17%), Positives = 110/306 (35%), Gaps = 36/306 (11%)
Query: 87 IQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGD 146
+ P A L G LTY +L +R+ ++A L + G+
Sbjct: 230 HLLFEEQAATTPDAVALVRGG---QQLTYAELDARANRLARLL--------ISLGVGPGE 278
Query: 147 RIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTS 206
+A++ + + + A + AG VP++ ++++ ++L + LT
Sbjct: 279 TVAIL--ADRSLELVVALLAVLKAGAAYVPLD-----PLYPAERLAYILEDSRPTLLLTQ 331
Query: 207 DACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRD 266
+ + L++ P L D AYI YT+
Sbjct: 332 AHL-------------RVDDVGLPGLALDDALSEIPDTDPIPQALLGDALAYIIYTSGST 378
Query: 267 GSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVY 326
G GV + A+ + + ++ + + ++ + ++L G +
Sbjct: 379 GQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFE-IFGALLEG-ARLV 436
Query: 327 IPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKD--ISLSSLRLLLVGDG 384
+ AL++V+PA+ ++++ +V ++ L LL D LR LL G
Sbjct: 437 LAPALLQVDPAALLELLEAQGITVLLLVPLLLR-LLLLAALAPDLISPCERLRQLLSGGE 495
Query: 385 ANPWSL 390
A P +L
Sbjct: 496 ALPLAL 501
|
Length = 642 |
| >gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-05
Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 19/178 (10%)
Query: 1196 AQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIR 1255
+ LT ++L++RA R+ L+ R + V + +++ L G V +
Sbjct: 4574 EEKLTYAELNRRANRLAHALIARG-VGPEVLVGIAMERSAEMMVGLLAVLKAGGAYVPLD 4632
Query: 1256 PPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDI---KSWPTILDTD 1312
P +P+ M+ D S + L+L+ ++++ L + + + + W D
Sbjct: 4633 PEYPRE-----RLAYMMED-SGAALLLTQSHLLQRLPIPDGLASLALDRDEDWEGFPAHD 4686
Query: 1313 DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPS 1370
P +L + LAY+ ++ +TG G+ +SH ++ + + EL P
Sbjct: 4687 --PAVRLHP-------DNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGERYELTPD 4735
|
Length = 5163 |
| >gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 2e-05
Identities = 110/545 (20%), Positives = 193/545 (35%), Gaps = 143/545 (26%)
Query: 1169 FLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 1228
L R G G + +D S+ L+ +L + R+GA L R + + V
Sbjct: 9 LLDRNVVEGRGGK-----TAFIDDISS---LSYGELEAQVRRLGAAL-RRLGVKREERVL 59
Query: 1229 LIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI 1288
L+ G+D AF G + G VPV + N T +++ S++ +V + ++
Sbjct: 60 LLMLDGVDFPIAFLGAIRAGIVPVAL------NTLLTADDYAYMLEDSRARVVFVSGELL 113
Query: 1289 KLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYR--------APT-AEMLAYLDFSVS 1339
++ K A ++ + + +LA L A T A+ A+ +S
Sbjct: 114 PVI--KAALGKSPHLEHRVVVGRPEAGEVQLAELLATESEQFKPAATQADDPAFWLYSSG 171
Query: 1340 TTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYC----------GLGFALWV 1389
+TGM G+ +H+ + ELY + + D GLG AL
Sbjct: 172 STGMPKGVVHTHS-------NPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTF 224
Query: 1390 LSSVYSGHHSILIP----PSEV-----EVNPALWLSAVSQYRVRDTFCSYGVMELCTKGL 1440
SV G ++L+ P V P ++ YGV L L
Sbjct: 225 PMSV--GATTVLMGERPTPDAVFDRLRRHQPTIF---------------YGVPTLYAAML 267
Query: 1441 SGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNI 1500
+ P L A + + R R+ TSA L + +G +A FG V+I
Sbjct: 268 AD--PNLPAED-------------QVRLRL-CTSAGEALPAEVGQRWQA---RFG--VDI 306
Query: 1501 AICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETK 1560
+ G S E +++ V G+ SGK +PG ++ + +
Sbjct: 307 ---VDGIGSTEMLHIFLSNLPGD------VRYGT--------SGKPVPGYRLRLVG-DGG 348
Query: 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYART--GYLGFL 1618
GE+ + P +A+ Y + + ++ F +G+ Y R G +
Sbjct: 349 QDVAAGEPGELLISGPSSATMY---WNNRAKTRDTFQGEWT--RSGDKYVRNDDGSYTYA 403
Query: 1619 RRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAEC 1678
RT D+ + + G+ P +IE++++ H + E
Sbjct: 404 GRT---------------------------DDMLKVSGIYVSPFEIESALI-QHPAVLEA 435
Query: 1679 AVFTW 1683
AV
Sbjct: 436 AVVGV 440
|
Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases. Length = 508 |
| >gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 2e-05
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 805 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
LT +L +R++R+ L + I GD V L+ PPG DL + VGAVPV I P
Sbjct: 1 DSLTFRELDERSDRIARGLRA-SGIRKGDRVVLMVPPGADLTALTFALFKVGAVPVLIDP 59
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 455 |
| >gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 2e-05
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 1197 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
LT +L +R++R+ L + I GD V L+ PPG DL + VGAVPV I P
Sbjct: 1 DSLTFRELDERSDRIARGLRA-SGIRKGDRVVLMVPPGADLTALTFALFKVGAVPVLIDP 59
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 455 |
| >gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-05
Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 49/172 (28%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT ++L +RA ++ L+ + GD VAL L A L GA V I P
Sbjct: 18 LTYAELDRRANKLAHHLISLG-VRPGDIVALCLERSPWLYVAILAVLKAGAAYVPIDPSA 76
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
P ++ I++ S + +VL+ DD
Sbjct: 77 PV------ERLQFIIEDSGATVVLT-------------------------SSPDD----- 100
Query: 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPS 1370
AY+ ++ +TG G+ ++H + + R+ + P
Sbjct: 101 ------------PAYVIYTSGSTGKPKGVVITHRNICNFLRAEGAILGIRPG 140
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family of siderophore-synthesizing NRPS includes the third adenylation domain of SidN from the endophytic fungus Neotyphodium lolii, ferrichrome siderophore synthetase, HC-toxin synthetase, and enniatin synthase. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 447 |
| >gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 3e-05
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 866
LT +L + R G L E I + V LI + AF+G + +GAVPV
Sbjct: 31 LTYGELQEEVNRWGNALRE-LGIERENRVLLILLDTPEFPTAFWGAIKIGAVPV------ 83
Query: 867 PQNLQTTLPTHQFISEILKWRAASTSE 893
P N T +++ + R SE
Sbjct: 84 PINTLLTPDDYRYYLNDSRARVLVISE 110
|
Benzoate CoA ligase and 4-hydroxybenzoate-coenzyme A ligase catalyze the first activating step for benzoate and 4-hydroxybenzoate catabolic pathways, respectively. Although these two enzymes share very high sequence homology, they have their own substrate preference. The reaction proceeds via a two-step process; the first ATP-dependent step forms the substrate-AMP intermediate, while the second step forms the acyl-CoA ester, releasing the AMP. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Some bacteria can use benzoic acid or benzenoid compounds as the sole source of carbon and energy through degradation. Benzoate CoA ligase and 4-hydroxybenzoate-Coenzyme A ligase are key enzymes of this process. Length = 506 |
| >gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 3e-05
Identities = 50/243 (20%), Positives = 86/243 (35%), Gaps = 35/243 (14%)
Query: 1145 AQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQL------ 1198
A+ F RL+ AR G L L V A + R QL
Sbjct: 3048 AESF-DRLLQAMLNNPAARLGELPTLAAHERRQVLHAWNATAAAYPSERLVHQLIEAQVA 3106
Query: 1199 --------------LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 1244
L+ ++L++RA R+ L+ + V + +++I A
Sbjct: 3107 RTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIG-VGPDVLVGVAVERSVEMIVALLAV 3165
Query: 1245 LYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKS 1304
L G V + P +P+ MI D S L+L+ ++++ L + +
Sbjct: 3166 LKAGGAYVPLDPEYPRERLAY-----MIED-SGVKLLLTQAHLLEQLPAPAGDTALT--- 3216
Query: 1305 WPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA 1364
LD D+ E LAY+ ++ +TG G+ + H A+ + + A
Sbjct: 3217 ----LDRLDLNGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEA 3272
Query: 1365 CEL 1367
EL
Sbjct: 3273 YEL 3275
|
Length = 3956 |
| >gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 5e-05
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 880 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 939
++ +L+ A + L G LT +L +RA R+ A L + GD VA
Sbjct: 13 LASLLERAARRNPDRPALIFLGRGGR----LTYRELDRRANRLAAALQALG-VKPGDRVA 67
Query: 940 LIFPPGIDLICAFYGCL 956
++ P + + AF L
Sbjct: 68 ILLPNSPEFLIAFLAAL 84
|
Length = 534 |
| >gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 7e-05
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 777 ISEILKWRAASTSEHVIFTLLN---SKGSAAQLLTCSQLHKRAERVGALLLERAKINTGD 833
+ +L+ RA+ + FT ++ A+ LT SQL++R V L +TGD
Sbjct: 3 VPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG--STGD 60
Query: 834 HVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 867
++ P G++ I AF G L G + V + P
Sbjct: 61 RAVILAPQGLEYIVAFLGALQAGLIAVPLSVPQG 94
|
Length = 578 |
| >gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 8e-05
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 1197 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
Q L+ ++L RA R+ L R + VA+ +L+ A L G V + P
Sbjct: 2027 QHLSYAELDSRANRLAHRLRARG-VGPEVRVAIAAERSFELVVALLAVLKAGGAYVPLDP 2085
Query: 1257 PHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKS---WPTILDTDD 1313
+P M+ D S + L+L+ +++++ L + + W DT
Sbjct: 2086 NYP-----AERLAYMLED-SGAALLLTQRHLLERLPLPAGVARLPLDRDAEWADYPDTA- 2138
Query: 1314 MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPS 1370
P +LA E LAY+ ++ +TG+ G+ +SH A+ + C++ EL P+
Sbjct: 2139 -PAVQLAG-------ENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPA 2187
|
Length = 5163 |
| >gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 8e-05
Identities = 40/165 (24%), Positives = 57/165 (34%), Gaps = 55/165 (33%)
Query: 1543 SGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT 1602
GK LPG ++ I NP+ GEI V+ P GY
Sbjct: 244 VGKPLPGRELRIVNPQD---------GEILVRGPSLFLGY---LPQG----GLTPPLDED 287
Query: 1603 G--NTGELYARTGYL---GFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGM 1657
G +TG+L GYL G+L +V+G D+ I+ G
Sbjct: 288 GWFHTGDL----GYLDAEGYL------------------------YVLGRRDDLIISGGE 319
Query: 1658 RYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGNE 1697
+P +IE V+ H + E AV W V V + +
Sbjct: 320 NIYPEEIEA-VLLQHPAVEEAAVVGVPDDEWGQRPVAFVVPNDDP 363
|
O-succinylbenzoic acid-CoA synthase catalyzes the coenzyme A (CoA)- and ATP-dependent conversion of o-succinylbenzoic acid to o-succinylbenzoyl-CoA. The reaction is the fourth step of the biosynthesis pathway of menaquinone (vitamin K2). In certain bacteria, menaquinone is used during fumarate reduction in anaerobic respiration. In cyanobacteria, the product of the menaquinone pathway is phylloquinone (2-methyl-3-phytyl-1,4-naphthoquinone), a molecule used exclusively as an electron transfer cofactor in Photosystem 1. In green sulfur bacteria and heliobacteria, menaquinones are used as loosely bound secondary electron acceptors in the photosynthetic reaction center. Length = 407 |
| >gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 9e-05
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
+LTY +L + + A L + GDR+ L+ P D + AF C+ AG
Sbjct: 10 SLTYRELHDLANRFANVLR--------ALGVSPGDRVLLLLP--DSPELVAAFLACLKAG 59
Query: 172 IVPVPIEVPLTRRD 185
V V + LT +D
Sbjct: 60 AVAVALNPLLTPQD 73
|
This family contains benzoate CoA ligase (BCL) and related ligases that catalyze the acylation of benzoate derivatives, 2-aminobenzoate and 4-hydroxybenzoate. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Xenobiotic aromatic compounds are also a major class of man-made pollutants. Some bacteria use benzoate as the sole source of carbon and energy through benzoate degradation. Benzoate degradation starts with its activation to benzoyl-CoA by benzoate CoA ligase. The reaction catalyzed by benzoate CoA ligase proceeds via a two-step process; the first ATP-dependent step forms an acyl-AMP intermediate, and the second step forms the acyl-CoA ester with release of the AMP. Length = 436 |
| >gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-04
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 803 AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTI 862
A LT +L +RA + A L GD VA++ P G + I A G L GA V I
Sbjct: 9 GAGTLTYGELARRANAIAAALRAAGVAP-GDLVAVVMPKGWEQIVAVLGILLAGAAYVPI 67
Query: 863 RPPHPQ 868
P P
Sbjct: 68 DPDQPA 73
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the TLM biosynthetic gene cluster from Streptoalloteichus that consists of nine NRPS genes; the N-terminal module of TlmVI (NRPS-5) and the starter module of BlmVI (NRPS-5) are comprised of the acyl CoA ligase (AL) and acyl carrier protein (ACP)-like domains, which are thought to be involved in the biosynthesis of the beta-aminoalaninamide moiety. Length = 476 |
| >gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 1e-04
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
+T ++L + +R+ A LL+ + GD VAL + A+Y L GAV V + P
Sbjct: 2 ITYAELLELVDRL-AGLLQEKGVRKGDRVALYMQNSPQFVIAYYAILRAGAVVVPVNP 58
|
The members of this family are putative long-chain fatty acyl-CoA synthetases, which catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. Fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. Length = 430 |
| >gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 1e-04
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
+T ++L + +R+ A LL+ + GD VAL + A+Y L GAV V + P
Sbjct: 2 ITYAELLELVDRL-AGLLQEKGVRKGDRVALYMQNSPQFVIAYYAILRAGAVVVPVNP 58
|
The members of this family are putative long-chain fatty acyl-CoA synthetases, which catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. Fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. Length = 430 |
| >gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-04
Identities = 96/462 (20%), Positives = 149/462 (32%), Gaps = 121/462 (26%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
LTYG+L + ++A L + GD +A PN F+ + C G
Sbjct: 1 RLTYGELDDAADRLAAALAELGVRP--------GDVVAFQLPNW--WEFVVVYLACARIG 50
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLT 231
V PI VP+ R +++GF+L +V P G
Sbjct: 51 AVINPI-VPIYR----ERELGFILRQARARVLFV--------PDEFRG------------ 85
Query: 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH 291
D+A P DD A + YT+ G GV T +L+ R+ +
Sbjct: 86 -----------FDYAAMP---DDV-ALLLYTSGTTGEPKGVMHTHNTLLAEVRSYVERLG 130
Query: 292 YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKV-NPASWMQMITKYRASV 350
T + ++ TG + + +L G V L +PA +++I ++ +
Sbjct: 131 LTPDDVVLMPSPLAHITGFLYGLELPLLLGATVV-----LQDRWDPARALELIREHGVTF 185
Query: 351 AVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAI 410
+ + L LLA D L SLR+ L G P L+ + +
Sbjct: 186 TMGATPFLA-DLLAAADAAGPDLPSLRVFLCGGAPVPRELA--RRAAEAL------GAKV 236
Query: 411 CPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM 470
+E V+V P D + + T G+ +
Sbjct: 237 VRAYGMTEVPLVTVGTPDDP----------------------DDKRAAT------DGRPV 268
Query: 471 PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALS 530
PG + +V D E GE+ V Y P
Sbjct: 269 PGVEVRIV--DDDGNDVPPGEEGELQVRGPQLFLGYLD------------PPDNTEAFTD 314
Query: 531 QDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDII 572
D + R+G LG L DG + +TGRK DII
Sbjct: 315 -DGWFRTGDLGRLDA----------DGYLRITGRK---KDII 342
|
Cyclohexanecarboxylate-CoA ligase activates the aliphatic ring compound, cyclohexanecarboxylate, for degradation. It catalyzes the synthesis of cyclohexanecarboxylate-CoA thioesters in a two-step reaction involving the formation of cyclohexanecarboxylate-AMP anhydride, followed by the nucleophilic substitution of AMP by CoA. Length = 437 |
| >gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 2e-04
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 911 TCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCL 956
T +L +RA R+ A L + GD VA++ P + + A L
Sbjct: 1 TYRELDERANRLAAALRALG-VGPGDRVAILLPNSPEWVVAILAVL 45
|
Length = 412 |
| >gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) | Back alignment and domain information |
|---|
Score = 45.5 bits (109), Expect = 2e-04
Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 58/230 (25%)
Query: 1197 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
Q LT +L++RA R+ L R + GD VA+ +++ A L GA V + P
Sbjct: 11 QSLTYRELNERANRLAHYLRARG-VGPGDLVAICLERSPEMVVAILAVLKAGAAYVPLDP 69
Query: 1257 PHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPK 1316
+P + +++ S + L+L+ D DD
Sbjct: 70 AYPAE------RLAYMLEDSGAKLLLT--------------------------DPDD--- 94
Query: 1317 KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALC 1376
LAY+ ++ +TG G+ + H + +L ++ L +
Sbjct: 95 --------------LAYVIYTSGSTGRPKGVMVEHRGLVNLLAWLQERYGLTAGDRVLQ- 139
Query: 1377 LDPYCGLGF--ALW-VLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 1423
+ F ++W + + SG ++++ P EV +P + ++R+
Sbjct: 140 ---FASFSFDASVWEIFPPLLSG-ATLVLAPPEVLRDPEALAELLREHRI 185
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 445 |
| >gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 2e-04
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 31/139 (22%)
Query: 1543 SGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT 1602
G+ LPGV+V I +P+ G+ +GEI V+ GY Y D A+ A
Sbjct: 175 VGRPLPGVEVKIVDPDG-GEVPPGEVGEICVRGYSVMKGY---YNDPEATAEAIDA---- 226
Query: 1603 GNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPI 1662
G L TG LG++ G + +VG + + I+ G +P
Sbjct: 227 --DGWL--HTGDLGYMD---EDGY---------------LRIVGRIKDMIIRGGENIYPA 264
Query: 1663 DIENSVMRAHKKIAECAVF 1681
+IE + H +AE AV
Sbjct: 265 EIEE-ALLTHPAVAEAAVV 282
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 347 |
| >gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-04
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 779 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 838
E L+ RAA + T +++ GS + + ++L + AER+ A L + GD V L
Sbjct: 14 EALQ-RAAEHAPGRGITYIDADGSE-EFQSYAELLEEAERILAGLRAL-GLKPGDSVILQ 70
Query: 839 FPPGIDLICAFYGCLYVGAVPVTIRPPH 866
D + AF+ C+ G VPV + P
Sbjct: 71 LERNEDFVTAFWACVLGGFVPVPVAVPP 98
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPSs that synthesize toxins and antitumor agents; for example, TubE for Tubulysine, CrpA for cryptophycin, TdiA for terrequinone A, KtzG for kutzneride, and Vlm1/Vlm2 for Valinomycin. Nonribosomal peptide synthetases are large multifunctional enzymes which synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 560 |
| >gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 3e-04
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
+++VG L + I+ G +P +IE V+ H +AE AV W +V VV L
Sbjct: 417 LYIVGRLKDLIISGGENIYPEEIEA-VLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPG 475
Query: 1063 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 1118
L L + + L +VV +P + G+ R LR+ + A+
Sbjct: 476 GDAELTAEEL-RAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRAEPR 530
|
Length = 534 |
| >gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 3e-04
Identities = 69/317 (21%), Positives = 106/317 (33%), Gaps = 87/317 (27%)
Query: 254 DTPAYIEYTTDRDGSVMGVT-VTRAAMLSHCRALTQACHY-------TEGENMVCVLDFK 305
D PA I+YT+ G T + AML+H R + + TEG+ + +
Sbjct: 2 DDPALIQYTS-------GTTGRPKGAMLTH-RNVLNNGYSIARRLGLTEGDRTLVPVPLF 53
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLH------ 359
GL VL S+ G V + K +P + +++I + R + LH
Sbjct: 54 HVFGLVLGVLASLTAGATLVLME----KFDPGAALRLIERERITA-------LHGVPTMF 102
Query: 360 WGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDA-ICPCASSSE 418
LL D LSSLR + G P L + F P A I +E
Sbjct: 103 IALLEHPDFDKFDLSSLRTGISGGAPVPPEL--VRRIREEF------PMAEITTGYGMTE 154
Query: 419 CLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478
V + E+ + G+ +PG + +V
Sbjct: 155 TSGVG----------------------TQTSGDDPYEDRPGT-----VGRPLPGVEVKIV 187
Query: 479 KMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTA--LSQDTYTR 536
D EVGEICV Y+ P + TA + D +
Sbjct: 188 DPDGGE--VPPGEVGEICVRGYSVMKGYYNDP--------------EATAEAIDADGWLH 231
Query: 537 SGLLGFLGPGGLVFVCG 553
+G LG++ G + + G
Sbjct: 232 TGDLGYMDEDGYLRIVG 248
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 347 |
| >gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 3e-04
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 804 AQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIR 863
+ T ++L +R R+ A LL + GD VAL+ + + A++ +GAV V I
Sbjct: 1 GRRYTYAELAERVNRLAAGLL-ALGVRPGDRVALMLDNCPEFLRAWFALNKLGAVAVPIN 59
Query: 864 P 864
Sbjct: 60 T 60
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Members of this family include DitJ from Pseudomonas and similar proteins. Length = 421 |
| >gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 3e-04
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 1196 AQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIR 1255
+ T ++L +R R+ A LL + GD VAL+ + + A++ +GAV V I
Sbjct: 1 GRRYTYAELAERVNRLAAGLL-ALGVRPGDRVALMLDNCPEFLRAWFALNKLGAVAVPIN 59
Query: 1256 P 1256
Sbjct: 60 T 60
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Members of this family include DitJ from Pseudomonas and similar proteins. Length = 421 |
| >gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-04
Identities = 109/550 (19%), Positives = 175/550 (31%), Gaps = 136/550 (24%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+T +L++R + A L I GD VA+ + A L +GAV V I
Sbjct: 46 ITYRELYERVRAL-ASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPIYS-- 102
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVL-SNQ---NVIKLLKSKEASNVVDIKSWPT---ILDT 1311
+T + I++ S+S ++ NQ +++ + V I ++
Sbjct: 103 ----TSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEA 158
Query: 1312 DDMPKK---------------KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSH----A 1352
+ + L P + LA + ++ TTG G+ ++H A
Sbjct: 159 KALVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLA 218
Query: 1353 AVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV----- 1407
V + + R L P + + G ++L
Sbjct: 219 QVAGIDEVLPPIGP--GDRV--LSFLPLAHIFERAFEGGLALYGGVTVLFKEDPRTLLED 274
Query: 1408 --EVNPALWLSAVSQY-RVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVA 1464
EV P + + + +V G+ME K + K AL + A
Sbjct: 275 LKEVRPTVMIGVPRVWEKVYK-----GIME---KVAKAPAVRRKLFRWALKVAYKKISRA 326
Query: 1465 EERPRIHLTSA------FSKLFSALG------------LSPRAVS--TSFGCRVNIAICL 1504
F K+ ALG LSP + S G + L
Sbjct: 327 LLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPI-----L 381
Query: 1505 QGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCG 1564
+G E S V + DR G+ GK LPG++V IA
Sbjct: 382 EGYGLTETSAV---VSVNPPDRF---VLGT--------VGKPLPGIEVKIA--------D 419
Query: 1565 DSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPA 1624
D GEI V+ P+ GY Y + A+ F T + + RTG LG L
Sbjct: 420 D---GEILVRGPNVMKGY---YKNPEATAEAF--------TEDGWFRTGDLGEL---DED 462
Query: 1625 GVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRY-HPIDIENSVMRAHKKIAECAVFTW 1683
G + + G E I L + P IE+ + I + V
Sbjct: 463 GY---------------LVITGRKKELIKLSNGKNIAPEPIES-KLAKSPLIEQICVVGD 506
Query: 1684 TN--LLVVVV 1691
L+ ++V
Sbjct: 507 DKKFLVALIV 516
|
Length = 613 |
| >gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-04
Identities = 46/256 (17%), Positives = 84/256 (32%), Gaps = 51/256 (19%)
Query: 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESS 141
L + VA + +TY +L R +A LL+
Sbjct: 17 TLPKRLAERVK-DRPDGVALM-YKELGGWEAITYRELYERVRALASGLLS--------LG 66
Query: 142 LKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQ 201
+ +GDR+A+ + N P + + G V VPI + +Q+ ++L + +
Sbjct: 67 IPAGDRVAI-FAANRPEWAIA-DLAILALGAVSVPI-----YSTSTPEQLAYILNESESK 119
Query: 202 VALTSD--------ACLKGLPKTAAGEVVAFKGWP---------------KLTWFVTEHL 238
V + L+ PK V+ ++ F+ +
Sbjct: 120 VIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLFLIDSA 179
Query: 239 AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRAL-TQACHYTEGEN 297
+ P+P DD A I YT+ G+ GV +T +L+ + G+
Sbjct: 180 GLEGRIAPPKP---DD-LATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDR 235
Query: 298 MVCVLDFKRETGLWHS 313
++ L L H
Sbjct: 236 VLSFLP------LAHI 245
|
Length = 613 |
| >gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 4e-04
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 1123 IWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLR 1171
IWV+ P A+GY+ A+ F ARL T G + RTG LGFL
Sbjct: 385 IWVRGPSVAAGYW---NRPEATAETFGARLATDEGG--WLRTGDLGFLH 428
|
FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin. Length = 547 |
| >gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 4e-04
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTI 862
LT L + R+ L + + GD VA+ P + + A +GA+P +
Sbjct: 41 LTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPAVV 95
|
Length = 528 |
| >gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 5e-04
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 805 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
Q LT +L++RA R+ L R + GD VA+ +++ A L GA V + P
Sbjct: 11 QSLTYRELNERANRLAHYLRARG-VGPGDLVAICLERSPEMVVAILAVLKAGAAYVPLDP 69
Query: 865 PHPQ 868
+P
Sbjct: 70 AYPA 73
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 445 |
| >gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 5e-04
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQL----LTCSQLHKRAERVGALLLERAKINTG 832
I+ L A + + + +G+ +L L+ ++L R++ + A L A I G
Sbjct: 8 IARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAI-AHGLNAAGIGRG 66
Query: 833 DHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
L+ P ++ + GAVPV + P
Sbjct: 67 MRAVLMVTPSLEFFALTFALFKAGAVPVLVDP 98
|
Length = 552 |
| >gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 6e-04
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 836
++++L+ A + T K LT ++L + ++R A L + + GD VA
Sbjct: 1 LADLLERAARRFPDRPALTFFGRK------LTYAELDELSDRFAAYLQQ-LGVKKGDRVA 53
Query: 837 LIFPPGIDLICAFYGCLYVGAVPVTIRP 864
L+ P A++G L GAV V + P
Sbjct: 54 LMLPNCPQFPIAYFGILKAGAVVVPVNP 81
|
This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 468 |
| >gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 7e-04
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 1197 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
L+ ++L R++ + A L A I G L+ P ++ + GAVPV + P
Sbjct: 40 DELSFAELDARSDAI-AHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVLVDP 98
|
Length = 552 |
| >gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-04
Identities = 89/460 (19%), Positives = 146/460 (31%), Gaps = 84/460 (18%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
LTY +L R+ ++A+ L+ + + + + + + + AG
Sbjct: 4576 KLTYAELNRRANRLAHALIARGVGPEV--------LVGIAMERS--AEMMVGLLAVLKAG 4625
Query: 172 --IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPK 229
VP+ E P R + +++ + LT L+ LP G
Sbjct: 4626 GAYVPLDPEYPRER-------LAYMMEDSGAALLLTQSHLLQRLP--------IPDGLAS 4670
Query: 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA 289
L E P P RL D AY+ YT+ G GV V+ ++++H A +
Sbjct: 4671 LALDRDEDWEGFP-AHDPAVRLHPDNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGER 4729
Query: 290 CHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMH------AVYIPYALMKVNPASWMQMI 343
T + VL F S S H +V I + +P I
Sbjct: 4730 YELTPDD---RVLQFMS-----FSFDGSHEGLYHPLINGASVVIRDDSLW-DPERLYAEI 4780
Query: 344 TKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSK 403
++R +V V ++ LA +D SLR+ G A +S D +
Sbjct: 4781 HEHRVTVLVFPP--VYLQQLAEHAERDGEPPSLRVYCFGGEAVA--QASYDLAW-----R 4831
Query: 404 GLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTL 463
L+P + +E + R G G +Y +
Sbjct: 4832 ALKPVYLFNGYGPTETTVTVLLWKARDGD---------ACGAAYMPI------------- 4869
Query: 464 QDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLL 523
G + V +D GE+ + G Y P L+ F P
Sbjct: 4870 ---GTPLGNRSGYV--LDGQLNPLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFG 4924
Query: 524 ADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTG 563
A G L R+G L G++ G D + + G
Sbjct: 4925 APGGRL-----YRTGDLARYRADGVIDYLGRVDHQVKIRG 4959
|
Length = 5163 |
| >gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 8e-04
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
TY +L R ++A LL + + GDR+AL+ N FL A++ G
Sbjct: 3 RYTYAELAERVNRLAAGLLALGV--------RPGDRVALMLDNC--PEFLRAWFALNKLG 52
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACL 210
V VPI L +++ +L ++ + A +
Sbjct: 53 AVAVPINTALRG-----EELAHILDHSGARLIVVDTAAI 86
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Members of this family include DitJ from Pseudomonas and similar proteins. Length = 421 |
| >gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 8e-04
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 34/142 (23%)
Query: 1544 GKLLPGVKVIIANPETKGQ-CGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT 1602
GK +P V++ + + G C +GE+ + + GY + D A++ +
Sbjct: 174 GKAIPNVELWVVDE--DGNRCAPGEVGELVHRGANVMKGY---WNDPEATAERLRPGPLP 228
Query: 1603 GNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA---VFVVGALDETIMLRGMRY 1659
G LY TG L + D ++ VG D+ I RG R
Sbjct: 229 GEIV-LY--TGDLVRM---------------------DEEGYLYFVGRKDDMIKTRGYRV 264
Query: 1660 HPIDIENSVMRAHKKIAECAVF 1681
P +IE + AH +AE AV
Sbjct: 265 SPTEIEEVIC-AHPLVAEAAVI 285
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 350 |
| >gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 0.001
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 808 TCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 867
T +L +RA R+ L + GD VA++ +L+ A L GA V + P +P
Sbjct: 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYP 60
Query: 868 Q 868
Sbjct: 61 A 61
|
This model represents a domain responsible for the specific recognition of amino acids and activation as adenylyl amino acids. The reaction catalyzed is aa + ATP -> aa-AMP + PPi. These domains are usually found as components of multi-domain non-ribosomal peptide synthetases and are usually called "A-domains" in that context (for a review, see ). A-domains are almost invariably followed by "T-domains" (thiolation domains, pfam00550) to which the amino acid adenylate is transferred as a thiol-ester to a bound pantetheine cofactor with the release of AMP (these are also called peptide carrier proteins, or PCPs. When the A-domain does not represent the first module (corresponding to the first amino acid in the product molecule) it is usually preceded by a "C-domain" (condensation domain, pfam00668) which catalyzes the ligation of two amino acid thiol-esters from neighboring modules. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group. Length = 409 |
| >gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 0.001
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 76 PSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSI--TLTYGKLLSRSLKVAYTLLTKP 133
P+G+ ++ R + + VA D S T+TY + + A LL
Sbjct: 12 PAGVAAEIDLEQFRTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLL--- 68
Query: 134 INRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRR-------DA 186
E LK GDR+AL+ PN + + A +G + AG+ V + T R D+
Sbjct: 69 ----GELQLKKGDRVALMMPNC--LQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDS 122
Query: 187 GSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPK--LTWFVTEHLAKTPKD 244
G+ + + + +D +K + T G+++ G+PK L FV +++ K +
Sbjct: 123 GASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDML---GFPKAALVNFVVKYVKKLVPE 179
Query: 245 W-------------------APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSH 282
+ P ++ D A+++YT G G V + AML+H
Sbjct: 180 YRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYT----GGTTG--VAKGAMLTH 230
|
Length = 560 |
| >gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 0.001
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 462 TLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFK 518
L CG+ PG V +D EVGEICV YW P + F+
Sbjct: 337 RLTSCGRPTPGL--RVALLDEDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAFR 391
|
Length = 524 |
| >gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.001
Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 50/169 (29%)
Query: 1193 RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPV 1252
R + L+ ++L +R+ ++ A L + GD V ++ DL+ A L GA V
Sbjct: 7 RDDDRTLSYAELDERSNQLAARLRALG-VGPGDRVGVLLERSADLVAALLAILKAGAAYV 65
Query: 1253 TIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTD 1312
+ P +P ++ +++ ++ L+L+
Sbjct: 66 PLDPSYP------AERLQYMLEDAEPALLLT----------------------------- 90
Query: 1313 DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM 1361
+ LAY+ ++ +TG G+++SH A+ + SM
Sbjct: 91 --------------DPDDLAYVIYTSGSTGKPKGVEVSHRALVNFLLSM 125
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the myxovirescin (TA) antibiotic biosynthetic gene in Myxococcus xanthus; TA production plays a role in predation. It also includes the salinosporamide A polyketide synthase which is involved in the biosynthesis of salinosporamide A, a marine microbial metabolite whose chlorine atom is crucial for potent proteasome inhibition and anticancer activity. Length = 438 |
| >gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 0.002
Identities = 52/282 (18%), Positives = 103/282 (36%), Gaps = 32/282 (11%)
Query: 111 ITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFA 170
TL Y +L R+ ++A+ L+ E + + + + I + A + A
Sbjct: 535 ETLDYAELNRRANRLAHALI--------ERGVGPDVLVGVAMERS--IEMVVALLAILKA 584
Query: 171 G--IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWP 228
G VP+ E P R + ++L +Q+ L+ + LP A +V+
Sbjct: 585 GGAYVPLDPEYPAER-------LAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLD--- 634
Query: 229 KLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ 288
+ ++ + + P L + AY+ YT+ G G A+ + + Q
Sbjct: 635 RPAAWLEGY-----SEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQ 689
Query: 289 ACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRA 348
A G+ ++ F + +W +++G V + +PA +++I +
Sbjct: 690 AYGLGVGDTVLQKTPFSFDVSVWEFFWP-LMSGARLVVAAPGDHR-DPAKLVELINREGV 747
Query: 349 SVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSL 390
L L +D S +SLR ++ A P
Sbjct: 748 DTLHFVPSMLQ-AFL--QDEDVASCTSLRRIVCSGEALPADA 786
|
Length = 5163 |
| >gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.002
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 866
LT ++L +RA ++ L+ + GD VAL L A L GA V I P
Sbjct: 18 LTYAELDRRANKLAHHLISLG-VRPGDIVALCLERSPWLYVAILAVLKAGAAYVPIDPSA 76
Query: 867 PQ 868
P
Sbjct: 77 PV 78
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family of siderophore-synthesizing NRPS includes the third adenylation domain of SidN from the endophytic fungus Neotyphodium lolii, ferrichrome siderophore synthetase, HC-toxin synthetase, and enniatin synthase. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 447 |
| >gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.002
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT +L R+ R+ LL + GD VA++ P + + + G V V + P +
Sbjct: 12 LTYGELDARSGRLAKALLALG-LLPGDRVAVLAPKSAEYVVLYLAIWRAGGVAVPLNPSY 70
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVL 1282
P + I+ S+ L++
Sbjct: 71 PA------AELAYILSDSQPSLLV 88
|
MCS catalyzes the formation of malonyl-CoA in a two-step reaction consisting of the adenylation of malonate with ATP, followed by malonyl transfer from malonyl-AMP to CoA. Malonic acid and its derivatives are the building blocks of polyketides and malonyl-CoA serves as the substrate of polyketide synthases. Malonyl-CoA synthetase has broad substrate tolerance and can activate a variety of malonyl acid derivatives. MCS may play an important role in biosynthesis of polyketides, the important secondary metabolites with therapeutic and agrochemical utility. Length = 430 |
| >gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.002
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
+LTYG+L +RS ++A L GDR+A++ P + ++ + AG
Sbjct: 11 SLTYGELDARSGRLA--------KALLALGLLPGDRVAVLAPKS--AEYVVLYLAIWRAG 60
Query: 172 IVPVPI 177
V VP+
Sbjct: 61 GVAVPL 66
|
MCS catalyzes the formation of malonyl-CoA in a two-step reaction consisting of the adenylation of malonate with ATP, followed by malonyl transfer from malonyl-AMP to CoA. Malonic acid and its derivatives are the building blocks of polyketides and malonyl-CoA serves as the substrate of polyketide synthases. Malonyl-CoA synthetase has broad substrate tolerance and can activate a variety of malonyl acid derivatives. MCS may play an important role in biosynthesis of polyketides, the important secondary metabolites with therapeutic and agrochemical utility. Length = 430 |
| >gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.002
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 866
LT +L R+ R+ LL + GD VA++ P + + + G V V + P +
Sbjct: 12 LTYGELDARSGRLAKALLALG-LLPGDRVAVLAPKSAEYVVLYLAIWRAGGVAVPLNPSY 70
Query: 867 PQ 868
P
Sbjct: 71 PA 72
|
MCS catalyzes the formation of malonyl-CoA in a two-step reaction consisting of the adenylation of malonate with ATP, followed by malonyl transfer from malonyl-AMP to CoA. Malonic acid and its derivatives are the building blocks of polyketides and malonyl-CoA serves as the substrate of polyketide synthases. Malonyl-CoA synthetase has broad substrate tolerance and can activate a variety of malonyl acid derivatives. MCS may play an important role in biosynthesis of polyketides, the important secondary metabolites with therapeutic and agrochemical utility. Length = 430 |
| >gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 0.003
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 179 VPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHL 238
VPL D ++++ ++L +++ LT L+ LP+ +A + HL
Sbjct: 1209 VPLDP-DYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALD---------SLHL 1258
Query: 239 AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAM 279
P AP L D AY+ YT+ G GV T AA+
Sbjct: 1259 DSWP-SQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAAL 1298
|
Length = 4334 |
| >gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.003
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
LT ++L+ R R A L I GD VA+ P + A G L GAV V +
Sbjct: 31 LTYAELNARVRRAAAALAALG-IGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLNT 87
|
Length = 513 |
| >gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.003
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
LT ++L+ R R A L I GD VA+ P + A G L GAV V +
Sbjct: 31 LTYAELNARVRRAAAALAALG-IGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLNT 87
|
Length = 513 |
| >gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.003
Identities = 54/278 (19%), Positives = 103/278 (37%), Gaps = 37/278 (13%)
Query: 113 LTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG- 171
L+Y +L R+ ++A+ L+ I + + +A+ + + A + AG
Sbjct: 3121 LSYAELNRRANRLAHRLIA--IGVGPDVLVG----VAV----ERSVEMIVALLAVLKAGG 3170
Query: 172 -IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKL 230
VP+ E P R + +++ +++ LT L+ LP A +
Sbjct: 3171 AYVPLDPEYPRER-------LAYMIEDSGVKLLLTQAHLLEQLPAPAGDTAL-------- 3215
Query: 231 TWFVTEHLAKTPK-DWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA 289
+ L + P R+ + AY+ YT+ G GV V A+ +H + +A
Sbjct: 3216 ---TLDRLDLNGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEA 3272
Query: 290 CHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRAS 349
+ ++ + F + L +++ G V L +P Q I +R S
Sbjct: 3273 YELDANDRVLLFMSFSFDGAQER-FLWTLICGGCLVVRDNDLW--DPEELWQAIHAHRIS 3329
Query: 350 VAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANP 387
+A L +D +SL + + G A P
Sbjct: 3330 IACFPPAYLQQFA---EDAGGADCASLDIYVFGGEAVP 3364
|
Length = 3956 |
| >gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.003
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 866
LT +L +R ++ A L + GD VAL+ I+ + F L +GAV + + P
Sbjct: 2 LTFQELDQRVSQL-AEQLAALGVRRGDRVALLAKNSIEFLLLFLALLRLGAVVLPLNPRL 60
Query: 867 PQN-LQTTLPTHQ 878
PQ LQ L Q
Sbjct: 61 PQEELQQQLADLQ 73
|
O-succinylbenzoic acid-CoA synthase catalyzes the coenzyme A (CoA)- and ATP-dependent conversion of o-succinylbenzoic acid to o-succinylbenzoyl-CoA. The reaction is the fourth step of the biosynthesis pathway of menaquinone (vitamin K2). In certain bacteria, menaquinone is used during fumarate reduction in anaerobic respiration. In cyanobacteria, the product of the menaquinone pathway is phylloquinone (2-methyl-3-phytyl-1,4-naphthoquinone), a molecule used exclusively as an electron transfer cofactor in Photosystem 1. In green sulfur bacteria and heliobacteria, menaquinones are used as loosely bound secondary electron acceptors in the photosynthetic reaction center. Length = 407 |
| >gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.003
Identities = 51/260 (19%), Positives = 88/260 (33%), Gaps = 50/260 (19%)
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
++SG R+ALV N+ I + + C+ G + LT + L
Sbjct: 18 AQGIRSGSRVALVGQNS--IEMVLLLHACLLLGAEIAMLNTRLT-----ENERTNQLEDL 70
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLT------ 252
D+Q+ LT D+ L+ F + L + A T
Sbjct: 71 DVQLLLT-DSLLE------------------EKDFQADSLDRI---EAAGRYETSLSASF 108
Query: 253 -DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLW 311
D A + +T+ G V T + + +TE +N + L +GL
Sbjct: 109 NMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGL- 167
Query: 312 HSVL-TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKD 370
S+L ++ G + I ++MI R + + L+ L +
Sbjct: 168 -SILFRWLIEGA-TLRIVDKF-----NQLLEMIANERVTHISLVPTQLNR--LLDEGG-- 216
Query: 371 ISLSSLRLLLVGDGANPWSL 390
+LR +L+G A P L
Sbjct: 217 -HNENLRKILLGGSAIPAPL 235
|
This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 436 |
| >gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.004
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 794 FTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCL 853
+ +G + L L RA GA L + GD VALI D + AF+ C
Sbjct: 37 MNFYDRRGQLEEALPYQTLRARA-EAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQ 95
Query: 854 YVGAVPV 860
Y G VPV
Sbjct: 96 YAGLVPV 102
|
Length = 579 |
| >gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.004
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 24/132 (18%)
Query: 1006 DAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKI--AECAVFT----WTNLLVVVVEL 1059
+F+VG + + +++ G ++P DIE ++ ++I A + T LV ++EL
Sbjct: 450 GELFIVGRIKDLLIVDGRNHYPDDIEATI----QEITGGRVAAISVPDDGTEKLVAIIEL 505
Query: 1060 ------DGNESEALDLVP-LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQR-----M 1107
D + L V VT+A+ + H L V V+V PG +PI + G+ +R
Sbjct: 506 KKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQ 565
Query: 1108 HLRDGFLADQLD 1119
+ +D F +LD
Sbjct: 566 YRQDEF--TRLD 575
|
Length = 578 |
| >gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.004
Identities = 58/241 (24%), Positives = 91/241 (37%), Gaps = 52/241 (21%)
Query: 1516 YVDLRALRNDRVSL-VERGSPHSLCLLESGKLLPGVKVIIANPETKGQ-CGDSHLGEIWV 1573
VD L R ++ +G+ L L G LPG++V + + + GQ +G I +
Sbjct: 336 EVDADLLAALRRAVPATKGNTRRLATL--GPPLPGLEVRVVDED--GQVLPPRGVGVIEL 391
Query: 1574 QSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633
+ GY ++ G AQ L +TG+L GYL
Sbjct: 392 RGESVTPGYLTMDGFIP--AQDADGWL---DTGDL----GYL---------------TEE 427
Query: 1634 GVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNL------L 1687
G V V G + + I++ G +P DIE + R AV +
Sbjct: 428 G------EVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGF 481
Query: 1688 VVVVE--LDGNESEALDLVPLVTNAVLEEHHLIVGVA----VVVDPGVVPINSRGEKQRM 1741
V VE + +E + V + V+ E VGV VV+ PG +P G+ +R
Sbjct: 482 AVAVESNAFEDPAEVRRIRHQVAHEVVAE----VGVRPRNVVVLGPGSIPKTPSGKLRRA 537
Query: 1742 H 1742
+
Sbjct: 538 N 538
|
Length = 545 |
| >gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.004
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
LT +L +R ++ A L + GD VAL+ I+ + F L +GAV + + P
Sbjct: 2 LTFQELDQRVSQL-AEQLAALGVRRGDRVALLAKNSIEFLLLFLALLRLGAVVLPLNP 58
|
O-succinylbenzoic acid-CoA synthase catalyzes the coenzyme A (CoA)- and ATP-dependent conversion of o-succinylbenzoic acid to o-succinylbenzoyl-CoA. The reaction is the fourth step of the biosynthesis pathway of menaquinone (vitamin K2). In certain bacteria, menaquinone is used during fumarate reduction in anaerobic respiration. In cyanobacteria, the product of the menaquinone pathway is phylloquinone (2-methyl-3-phytyl-1,4-naphthoquinone), a molecule used exclusively as an electron transfer cofactor in Photosystem 1. In green sulfur bacteria and heliobacteria, menaquinones are used as loosely bound secondary electron acceptors in the photosynthetic reaction center. Length = 407 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1761 | |||
| PRK12467 | 3956 | peptide synthase; Provisional | 100.0 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 100.0 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 100.0 | |
| PRK05691 | 4334 | peptide synthase; Validated | 100.0 | |
| PRK05691 | 4334 | peptide synthase; Validated | 100.0 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 100.0 | |
| KOG3628|consensus | 1363 | 100.0 | ||
| KOG1176|consensus | 537 | 100.0 | ||
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 100.0 | |
| KOG1177|consensus | 596 | 100.0 | ||
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 100.0 | |
| KOG1177|consensus | 596 | 100.0 | ||
| COG0365 | 528 | Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l | 100.0 | |
| COG0318 | 534 | CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l | 100.0 | |
| KOG1176|consensus | 537 | 100.0 | ||
| TIGR02316 | 628 | propion_prpE propionate--CoA ligase. This family c | 100.0 | |
| PRK06334 | 539 | long chain fatty acid--[acyl-carrier-protein] liga | 100.0 | |
| PLN02654 | 666 | acetate-CoA ligase | 100.0 | |
| PRK00174 | 637 | acetyl-CoA synthetase; Provisional | 100.0 | |
| PRK06060 | 705 | acyl-CoA synthetase; Validated | 100.0 | |
| COG0365 | 528 | Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l | 100.0 | |
| PRK07788 | 549 | acyl-CoA synthetase; Validated | 100.0 | |
| PLN02860 | 563 | o-succinylbenzoate-CoA ligase | 100.0 | |
| COG0318 | 534 | CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l | 100.0 | |
| TIGR02188 | 625 | Ac_CoA_lig_AcsA acetate--CoA ligase. This model de | 100.0 | |
| PTZ00237 | 647 | acetyl-CoA synthetase; Provisional | 100.0 | |
| PRK07769 | 631 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| COG1021 | 542 | EntE Peptide arylation enzymes [Secondary metaboli | 100.0 | |
| PRK07529 | 632 | AMP-binding domain protein; Validated | 100.0 | |
| PRK07769 | 631 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK13295 | 547 | cyclohexanecarboxylate-CoA ligase; Reviewed | 100.0 | |
| PRK05851 | 525 | long-chain-fatty-acid--[acyl-carrier-protein] liga | 100.0 | |
| PRK12476 | 612 | putative fatty-acid--CoA ligase; Provisional | 100.0 | |
| PLN02736 | 651 | long-chain acyl-CoA synthetase | 100.0 | |
| PRK06334 | 539 | long chain fatty acid--[acyl-carrier-protein] liga | 100.0 | |
| TIGR02316 | 628 | propion_prpE propionate--CoA ligase. This family c | 100.0 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 100.0 | |
| PRK10524 | 629 | prpE propionyl-CoA synthetase; Provisional | 100.0 | |
| PRK04319 | 570 | acetyl-CoA synthetase; Provisional | 100.0 | |
| PLN02246 | 537 | 4-coumarate--CoA ligase | 100.0 | |
| PLN02614 | 666 | long-chain acyl-CoA synthetase | 100.0 | |
| PLN02574 | 560 | 4-coumarate--CoA ligase-like | 100.0 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 100.0 | |
| PLN02654 | 666 | acetate-CoA ligase | 100.0 | |
| PLN03052 | 728 | acetate--CoA ligase; Provisional | 100.0 | |
| PRK03584 | 655 | acetoacetyl-CoA synthetase; Provisional | 100.0 | |
| PRK05677 | 562 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK13382 | 537 | acyl-CoA synthetase; Provisional | 100.0 | |
| COG1021 | 542 | EntE Peptide arylation enzymes [Secondary metaboli | 100.0 | |
| PRK08314 | 546 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PLN02861 | 660 | long-chain-fatty-acid-CoA ligase | 100.0 | |
| PRK05857 | 540 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK12476 | 612 | putative fatty-acid--CoA ligase; Provisional | 100.0 | |
| PRK06060 | 705 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 100.0 | |
| TIGR01217 | 652 | ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym | 100.0 | |
| PRK00174 | 637 | acetyl-CoA synthetase; Provisional | 100.0 | |
| PRK05852 | 534 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK09274 | 552 | peptide synthase; Provisional | 100.0 | |
| PLN02860 | 563 | o-succinylbenzoate-CoA ligase | 100.0 | |
| PTZ00237 | 647 | acetyl-CoA synthetase; Provisional | 100.0 | |
| PRK03640 | 483 | O-succinylbenzoic acid--CoA ligase; Provisional | 100.0 | |
| TIGR02188 | 625 | Ac_CoA_lig_AcsA acetate--CoA ligase. This model de | 100.0 | |
| PRK07788 | 549 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK07638 | 487 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06145 | 497 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK07529 | 632 | AMP-binding domain protein; Validated | 100.0 | |
| PRK06839 | 496 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06155 | 542 | crotonobetaine/carnitine-CoA ligase; Provisional | 100.0 | |
| PLN02574 | 560 | 4-coumarate--CoA ligase-like | 100.0 | |
| PRK08315 | 559 | AMP-binding domain protein; Validated | 100.0 | |
| PLN02614 | 666 | long-chain acyl-CoA synthetase | 100.0 | |
| TIGR03208 | 538 | cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. | 100.0 | |
| PTZ00216 | 700 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK07470 | 528 | acyl-CoA synthetase; Validated | 100.0 | |
| PLN02330 | 546 | 4-coumarate--CoA ligase-like 1 | 100.0 | |
| PRK08279 | 600 | long-chain-acyl-CoA synthetase; Validated | 100.0 | |
| PLN02736 | 651 | long-chain acyl-CoA synthetase | 100.0 | |
| PRK07514 | 504 | malonyl-CoA synthase; Validated | 100.0 | |
| PRK13388 | 540 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK12583 | 558 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK05620 | 576 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK05851 | 525 | long-chain-fatty-acid--[acyl-carrier-protein] liga | 100.0 | |
| PRK07656 | 513 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PTZ00342 | 746 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK10524 | 629 | prpE propionyl-CoA synthetase; Provisional | 100.0 | |
| TIGR02275 | 527 | DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot | 100.0 | |
| PRK04319 | 570 | acetyl-CoA synthetase; Provisional | 100.0 | |
| PRK07867 | 529 | acyl-CoA synthetase; Validated | 100.0 | |
| PLN02246 | 537 | 4-coumarate--CoA ligase | 100.0 | |
| PRK08316 | 523 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK05605 | 573 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK03584 | 655 | acetoacetyl-CoA synthetase; Provisional | 100.0 | |
| PRK10946 | 536 | entE enterobactin synthase subunit E; Provisional | 100.0 | |
| PRK12492 | 562 | long-chain-fatty-acid--CoA ligase; Provisional | 100.0 | |
| PLN03052 | 728 | acetate--CoA ligase; Provisional | 100.0 | |
| PRK07786 | 542 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK13295 | 547 | cyclohexanecarboxylate-CoA ligase; Reviewed | 100.0 | |
| PRK06087 | 547 | short chain acyl-CoA synthetase; Reviewed | 100.0 | |
| TIGR01734 | 502 | D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig | 100.0 | |
| PRK08008 | 517 | caiC putative crotonobetaine/carnitine-CoA ligase; | 100.0 | |
| PLN03102 | 579 | acyl-activating enzyme; Provisional | 100.0 | |
| PRK07787 | 471 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08314 | 546 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK05677 | 562 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PLN02861 | 660 | long-chain-fatty-acid-CoA ligase | 100.0 | |
| PRK07008 | 539 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 100.0 | |
| PRK06187 | 521 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK13382 | 537 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK06188 | 524 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06164 | 540 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK05850 | 578 | acyl-CoA synthetase; Validated | 100.0 | |
| TIGR03098 | 515 | ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor | 100.0 | |
| PRK09088 | 488 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK09192 | 579 | acyl-CoA synthetase; Validated | 100.0 | |
| TIGR01217 | 652 | ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym | 100.0 | |
| PRK09274 | 552 | peptide synthase; Provisional | 100.0 | |
| PRK08180 | 614 | feruloyl-CoA synthase; Reviewed | 100.0 | |
| PRK06710 | 563 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK07638 | 487 | acyl-CoA synthetase; Validated | 100.0 | |
| PLN02387 | 696 | long-chain-fatty-acid-CoA ligase family protein | 100.0 | |
| PRK13390 | 501 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK06178 | 567 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06839 | 496 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08751 | 560 | putative long-chain fatty acyl CoA ligase; Provisi | 100.0 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 100.0 | |
| TIGR03205 | 541 | pimA dicarboxylate--CoA ligase PimA. PimA, a membe | 100.0 | |
| PRK07059 | 557 | Long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK05857 | 540 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK05852 | 534 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08315 | 559 | AMP-binding domain protein; Validated | 100.0 | |
| PRK08279 | 600 | long-chain-acyl-CoA synthetase; Validated | 100.0 | |
| PRK06145 | 497 | acyl-CoA synthetase; Validated | 100.0 | |
| PLN02330 | 546 | 4-coumarate--CoA ligase-like 1 | 100.0 | |
| PRK07514 | 504 | malonyl-CoA synthase; Validated | 100.0 | |
| TIGR02262 | 508 | benz_CoA_lig benzoate-CoA ligase family. Character | 100.0 | |
| PRK06155 | 542 | crotonobetaine/carnitine-CoA ligase; Provisional | 100.0 | |
| PRK06018 | 542 | putative acyl-CoA synthetase; Provisional | 100.0 | |
| PRK04813 | 503 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| PRK13383 | 516 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK13388 | 540 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK05605 | 573 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK03640 | 483 | O-succinylbenzoic acid--CoA ligase; Provisional | 100.0 | |
| TIGR02275 | 527 | DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot | 100.0 | |
| PRK12582 | 624 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK09192 | 579 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK12583 | 558 | acyl-CoA synthetase; Provisional | 100.0 | |
| COG1022 | 613 | FAA1 Long-chain acyl-CoA synthetases (AMP-forming) | 100.0 | |
| PRK05850 | 578 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK07656 | 513 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK08180 | 614 | feruloyl-CoA synthase; Reviewed | 100.0 | |
| PTZ00342 | 746 | acyl-CoA synthetase; Provisional | 100.0 | |
| TIGR03208 | 538 | cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. | 100.0 | |
| PLN02430 | 660 | long-chain-fatty-acid-CoA ligase | 100.0 | |
| PRK07445 | 452 | O-succinylbenzoic acid--CoA ligase; Reviewed | 100.0 | |
| PRK07867 | 529 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK07470 | 528 | acyl-CoA synthetase; Validated | 100.0 | |
| PLN03051 | 499 | acyl-activating enzyme; Provisional | 100.0 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 100.0 | |
| PRK08974 | 560 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PLN03102 | 579 | acyl-activating enzyme; Provisional | 100.0 | |
| PRK13390 | 501 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK09029 | 458 | O-succinylbenzoic acid--CoA ligase; Provisional | 100.0 | |
| PRK10946 | 536 | entE enterobactin synthase subunit E; Provisional | 100.0 | |
| PRK12492 | 562 | long-chain-fatty-acid--CoA ligase; Provisional | 100.0 | |
| PRK09088 | 488 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08316 | 523 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 100.0 | |
| PRK07787 | 471 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK07798 | 533 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08008 | 517 | caiC putative crotonobetaine/carnitine-CoA ligase; | 100.0 | |
| PLN02479 | 567 | acetate-CoA ligase | 100.0 | |
| PRK07786 | 542 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| TIGR03098 | 515 | ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor | 100.0 | |
| PLN02387 | 696 | long-chain-fatty-acid-CoA ligase family protein | 100.0 | |
| PTZ00216 | 700 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK06710 | 563 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK13391 | 511 | acyl-CoA synthetase; Provisional | 100.0 | |
| TIGR01734 | 502 | D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig | 100.0 | |
| PRK06164 | 540 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK12406 | 509 | long-chain-fatty-acid--CoA ligase; Provisional | 100.0 | |
| PRK05620 | 576 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK06087 | 547 | short chain acyl-CoA synthetase; Reviewed | 100.0 | |
| PRK06187 | 521 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK08751 | 560 | putative long-chain fatty acyl CoA ligase; Provisi | 100.0 | |
| PRK07059 | 557 | Long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK08162 | 545 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06188 | 524 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06178 | 567 | acyl-CoA synthetase; Validated | 100.0 | |
| PLN02430 | 660 | long-chain-fatty-acid-CoA ligase | 100.0 | |
| PRK07445 | 452 | O-succinylbenzoic acid--CoA ligase; Reviewed | 100.0 | |
| PRK07008 | 539 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PLN03051 | 499 | acyl-activating enzyme; Provisional | 100.0 | |
| TIGR03205 | 541 | pimA dicarboxylate--CoA ligase PimA. PimA, a membe | 100.0 | |
| PRK12582 | 624 | acyl-CoA synthetase; Provisional | 100.0 | |
| COG1022 | 613 | FAA1 Long-chain acyl-CoA synthetases (AMP-forming) | 100.0 | |
| PRK08276 | 502 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK13383 | 516 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 100.0 | |
| TIGR02262 | 508 | benz_CoA_lig benzoate-CoA ligase family. Character | 100.0 | |
| KOG1256|consensus | 691 | 100.0 | ||
| PRK08974 | 560 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK06018 | 542 | putative acyl-CoA synthetase; Provisional | 100.0 | |
| PRK07768 | 545 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK04813 | 503 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| PLN02479 | 567 | acetate-CoA ligase | 100.0 | |
| PRK12406 | 509 | long-chain-fatty-acid--CoA ligase; Provisional | 100.0 | |
| PRK08308 | 414 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK13391 | 511 | acyl-CoA synthetase; Provisional | 100.0 | |
| TIGR01923 | 436 | menE O-succinylbenzoate-CoA ligase. This model rep | 100.0 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 100.0 | |
| PRK09029 | 458 | O-succinylbenzoic acid--CoA ligase; Provisional | 100.0 | |
| PRK08276 | 502 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| KOG1175|consensus | 626 | 100.0 | ||
| PRK07768 | 545 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK08162 | 545 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK07798 | 533 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08308 | 414 | acyl-CoA synthetase; Validated | 100.0 | |
| KOG1175|consensus | 626 | 100.0 | ||
| KOG1256|consensus | 691 | 100.0 | ||
| TIGR01923 | 436 | menE O-succinylbenzoate-CoA ligase. This model rep | 100.0 | |
| COG1020 | 642 | EntF Non-ribosomal peptide synthetase modules and | 100.0 | |
| KOG1180|consensus | 678 | 100.0 | ||
| PF00501 | 417 | AMP-binding: AMP-binding enzyme; InterPro: IPR0008 | 100.0 | |
| KOG1179|consensus | 649 | 100.0 | ||
| PF00501 | 417 | AMP-binding: AMP-binding enzyme; InterPro: IPR0008 | 100.0 | |
| TIGR01733 | 408 | AA-adenyl-dom amino acid adenylation domain. This | 100.0 | |
| KOG1180|consensus | 678 | 100.0 | ||
| TIGR01733 | 408 | AA-adenyl-dom amino acid adenylation domain. This | 100.0 | |
| COG1020 | 642 | EntF Non-ribosomal peptide synthetase modules and | 100.0 | |
| KOG1179|consensus | 649 | 100.0 | ||
| PRK07824 | 358 | O-succinylbenzoic acid--CoA ligase; Provisional | 100.0 | |
| PRK07824 | 358 | O-succinylbenzoic acid--CoA ligase; Provisional | 100.0 | |
| PTZ00297 | 1452 | pantothenate kinase; Provisional | 100.0 | |
| PTZ00297 | 1452 | pantothenate kinase; Provisional | 100.0 | |
| TIGR02372 | 386 | 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv | 100.0 | |
| KOG1178|consensus | 1032 | 100.0 | ||
| TIGR02372 | 386 | 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv | 100.0 | |
| KOG1178|consensus | 1032 | 100.0 | ||
| TIGR02155 | 422 | PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet | 100.0 | |
| TIGR02155 | 422 | PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet | 99.97 | |
| KOG3628|consensus | 1363 | 99.97 | ||
| TIGR03335 | 445 | F390_ftsA coenzyme F390 synthetase. This enzyme, c | 99.95 | |
| TIGR03335 | 445 | F390_ftsA coenzyme F390 synthetase. This enzyme, c | 99.94 | |
| TIGR03089 | 227 | conserved hypothetical protein TIGR03089. This pro | 99.9 | |
| COG1541 | 438 | PaaK Coenzyme F390 synthetase [Coenzyme metabolism | 99.88 | |
| TIGR03089 | 227 | conserved hypothetical protein TIGR03089. This pro | 99.87 | |
| COG1541 | 438 | PaaK Coenzyme F390 synthetase [Coenzyme metabolism | 99.83 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.73 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.7 | |
| TIGR02304 | 430 | aden_form_hyp probable adenylate-forming enzyme. M | 99.57 | |
| TIGR02304 | 430 | aden_form_hyp probable adenylate-forming enzyme. M | 99.32 | |
| PF13193 | 73 | AMP-binding_C: AMP-binding enzyme C-terminal domai | 98.95 | |
| PF13193 | 73 | AMP-binding_C: AMP-binding enzyme C-terminal domai | 98.87 | |
| PF04443 | 365 | LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR | 98.6 | |
| PF04443 | 365 | LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR | 98.4 | |
| PF03321 | 528 | GH3: GH3 auxin-responsive promoter; InterPro: IPR0 | 98.18 | |
| PF03321 | 528 | GH3: GH3 auxin-responsive promoter; InterPro: IPR0 | 97.68 | |
| PLN02249 | 597 | indole-3-acetic acid-amido synthetase | 97.47 | |
| PLN02249 | 597 | indole-3-acetic acid-amido synthetase | 97.14 | |
| PLN02247 | 606 | indole-3-acetic acid-amido synthetase | 96.44 | |
| PLN02247 | 606 | indole-3-acetic acid-amido synthetase | 96.44 | |
| PF14535 | 96 | AMP-binding_C_2: AMP-binding enzyme C-terminal dom | 96.43 | |
| PLN02620 | 612 | indole-3-acetic acid-amido synthetase | 96.11 | |
| PLN02620 | 612 | indole-3-acetic acid-amido synthetase | 95.98 | |
| PF14535 | 96 | AMP-binding_C_2: AMP-binding enzyme C-terminal dom | 95.75 |
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-140 Score=1605.65 Aligned_cols=1423 Identities=15% Similarity=0.165 Sum_probs=956.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..+++++|+++++++||++|+++++ +++||+||+++++++|++|+ +.|+++|++|+|+++|| ++
T Consensus 511 ~~~~~~~~~~~a~~~pd~~Al~~~~------~~lTY~eL~~~a~~lA~~L~--------~~Gv~~g~~V~i~~~~s--~~ 574 (3956)
T PRK12467 511 PDCVHQLIEAQARQHPERPALVFGE------QVLSYAELNRQANRLAHVLI--------AAGVGPDVLVGIAVERS--IE 574 (3956)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCC------ceEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HH
Confidence 4689999999999999999999866 68999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
+++++|||+|+|++||||||.+|.+ |+.+++++++++++|+++.....+........+..... .+...
T Consensus 575 ~vv~~lail~aG~~~vpld~~~p~~-----rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 642 (3956)
T PRK12467 575 MVVGLLAVLKAGGAYVPLDPEYPQD-----RLAYMLDDSGVRLLLTQSHLLAQLPVPAGLRSLCLDEP-------ADLLC 642 (3956)
T ss_pred HHHHHHHHHHhCcEEeccCCCChHH-----HHHHHHHhcCCCEEEechhhhhhcccccCccEEEeccc-------ccccc
Confidence 9999999999999999999999976 99999999999999999865443321111111111100 00000
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHh
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVL 319 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~ 319 (1761)
......+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++||+++++ +|.+|+
T Consensus 643 -~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~ 720 (3956)
T PRK12467 643 -GYSGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTE-LFGALA 720 (3956)
T ss_pred -ccCCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHH-HHHHHh
Confidence 111112233457899999999999999999999999999999999999999999999999999999999996 999999
Q ss_pred cCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHH
Q psy14338 320 NGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSV 399 (1761)
Q Consensus 320 ~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~ 399 (1761)
.|+++|+++++. .+++..+++.|+++++|++.++| +++..++.... .....++|.+++| ||+++++++++|.+.
T Consensus 721 ~G~~lv~~~~~~-~~~~~~l~~~i~~~~vt~~~~~P-s~~~~l~~~~~--~~~~~~lr~i~~g--Ge~l~~~~~~~~~~~ 794 (3956)
T PRK12467 721 SGATLHLLPPDC-ARDAEAFAALMADQGVTVLKIVP-SHLQALLQASR--VALPRPQRALVCG--GEALQVDLLARVRAL 794 (3956)
T ss_pred CCCEEEEcCccc-cCCHHHHHHHHHHcCCeEEEcCH-HHHHHHHhhhc--cccCCcccEEEEE--eecCCHHHHHHHHHh
Confidence 999999998643 57999999999999999999996 47777765432 2345678999999 999999999999987
Q ss_pred hhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe
Q psy14338 400 FQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK 479 (1761)
Q Consensus 400 ~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d 479 (1761)
++. . +++|.||+|||+++++...... . .......+||+|++|++++|+|
T Consensus 795 ~~~--~---~l~n~YG~TE~~~~~~~~~~~~------------------------~--~~~~~~~~iG~p~~~~~~~i~d 843 (3956)
T PRK12467 795 GPG--A---RLINHYGPTETTVGVSTYELSD------------------------E--ERDFGNVPIGQPLANLGLYILD 843 (3956)
T ss_pred CCC--C---EEEeCcCCChhhhheeeEeccc------------------------c--cccCCCCcccCCcCCCEEEEEC
Confidence 642 3 4999999999987766443210 0 0011246899999999999999
Q ss_pred CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeE
Q psy14338 480 MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLM 559 (1761)
Q Consensus 480 ~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 559 (1761)
++++ ++|.|++|||||+|+++++||+|+|++|+++|+++||...| +|||||||+|++++||.|+|+||+|+||
T Consensus 844 ~~~~--~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g-----~r~yrTGDl~~~~~dG~l~~~GR~d~~v 916 (3956)
T PRK12467 844 HYLN--PVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADG-----GRLYRTGDLARYRADGVIEYLGRMDHQV 916 (3956)
T ss_pred CCCC--CCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCC-----ceeEecCceeEEcCCCcEEEeccccCeE
Confidence 9886 69999999999999999999999999999999999987553 7999999999999999999999999999
Q ss_pred EECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCC-------CCCHHHHHHHHHHHHHHhhhcc
Q psy14338 560 TVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRP-------DCSEEESFQWMSRVLQAVDSIH 632 (1761)
Q Consensus 560 ki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~-------~~~~~~l~~~l~~~Lp~y~~P~ 632 (1761)
|+||+||+|+|||++|.++++| .+|+|++.++..++.++||+++.. ....++++++|++.||.||+|.
T Consensus 917 ki~G~rI~~~eIE~~L~~~p~V-----~~a~v~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~ 991 (3956)
T PRK12467 917 KIRGFRIELGEIEARLLAQPGV-----REAVVLAQPGDAGLQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDYMVPA 991 (3956)
T ss_pred EECCEecCHHHHHHHHHhCCCc-----ceEEEEEEcCCCCcEEEEEEEecccccccccccCHHHHHHHHHhhCchhcCCc
Confidence 9999999999999999999888 689998877666788999998542 2456889999999999999999
Q ss_pred eeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCC--------CcceeeecccccccCCCC------CccccCCCccc
Q psy14338 633 QVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNL--------HPANVLLCPHTCVTNLPK------PREIHSGNCLA 698 (1761)
Q Consensus 633 ~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~--------~~~~~~~~~~~~v~~~~~------~~~~~~~~~~~ 698 (1761)
.+ +.+++||+|+||||||++|++....... +.+..+...|..++++.. ..+..|+|+.+
T Consensus 992 ~~-------~~l~~lP~t~~GKidR~~L~~~~~~~~~~~~~~p~~~~e~~l~~i~~~vL~~~~i~~~d~Ff~lGgdSl~a 1064 (3956)
T PRK12467 992 HL-------LLLDSLPLTPNGKLDRKALPKPDASAVQATFVAPQTELEKRLAAIWADVLKVERVGLTDNFFELGGHSLLA 1064 (3956)
T ss_pred eE-------eeecccCCCCCCCcCHhhcCCcccccccccccCCCCHHHHHHHHHHHHHhCCCCCCCCCCchhccCccHHH
Confidence 86 6679999999999999999876532110 111223345555555421 12234457777
Q ss_pred cchhhhcccc-CCCCcccccCCCccccCC-------------CCCcccCCCCCcccccccceeccccccccccCCC----
Q psy14338 699 GQCKRRFLEG-NLHPANVLLCPHTCVTNL-------------PKPREIHSDIGPASVMVGNIVQGNRLASAQGRDM---- 760 (1761)
Q Consensus 699 ~~~~~~~~~~-~~~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~---- 760 (1761)
.++...+.+. +.......++.+.++..+ +..........|.|.+|.++|...++........
T Consensus 1065 ~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~~~~~~~~~~~~~~~~~~~~~~PlS~~Q~~lw~~~~~~~~~~~Y~~~~~ 1144 (3956)
T PRK12467 1065 TQVISRVRQRLGIQVPLRTLFEHQTLAGFAQAVAAQQQGAQPALPDVDRDQPLPLSYAQERQWFLWQLEPGSAAYHIPQA 1144 (3956)
T ss_pred HHHHHHHHHHhCCCcchHHhhccchHHHHHHHhhhhcccccccccccccccccccchHHHHHHHHHhhCCCCccceeeEE
Confidence 7776655542 333333334444433210 1111122234588999999986433322211111
Q ss_pred ----CCCCccc-chhhhhHHHHHHHHHHhhhccCCceEEEEecCccccc---cccch-----hHHhHHHHHHHHHH----
Q psy14338 761 ----GGPMEED-SDATRKHQFISEILKWRAASTSEHVIFTLLNSKGSAA---QLLTC-----SQLHKRAERVGALL---- 823 (1761)
Q Consensus 761 ----~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~---- 823 (1761)
+.++.+. ...+..+...+++||.++...... .++.+....... ..+.. ..+...........
T Consensus 1145 ~~l~g~ld~~~L~~Al~~vv~rH~~LRT~f~~~~~~-~~q~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fdl~ 1223 (3956)
T PRK12467 1145 LRLKGPLDIEALERSFDALVARHESLRTTFVQEDGR-TRQVIHPVGSLTLEEPLLLAADKDEAQLKVYVEAEARQPFDLE 1223 (3956)
T ss_pred EEECCCcCHHHHHHHHHHHHHhCCcceEEEEccCCe-EEEEECCCCCCceEEeecCcccchHHHHHHHHHHHhhCCCCCC
Confidence 1111100 112222223344455544332222 222222111100 00000 01111111110000
Q ss_pred ---hh---hhhcccCCceeeecCCcc-----------chhhhhhccccccccccccCCCCCcccccCCchhhhHHHHhhh
Q psy14338 824 ---LE---RAKINTGDHVALIFPPGI-----------DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKW 886 (1761)
Q Consensus 824 ---~~---~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 886 (1761)
+. ......+++++++..||+ +.+...|.....|..+ ... +....+.++..|
T Consensus 1224 ~~pl~R~~l~~~~~~~~~l~l~~HHii~DG~S~~ill~el~~~Y~~~~~g~~~-~l~-----------~~~~~y~dy~~w 1291 (3956)
T PRK12467 1224 QGPLLRVGLLRLAADEHVLVLTLHHIVSDGWSMQVLVDELVALYAAYSQGQSL-QLP-----------ALPIQYADYAVW 1291 (3956)
T ss_pred CCcceeEEEEEECCCeEEEEEecchhhhhHhHHHHHHHHHHHHHHHHhCCCCC-CCC-----------CCCCCHHHHHHH
Confidence 00 012244566677777775 2244455443333211 010 111235566666
Q ss_pred hccccccchhhhhhcCccchhhhhhhhccchhhhHHHHHHhhhhhccCCCcccccCCCcccccccccccccCCCCCCCCC
Q psy14338 887 RAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPS 966 (1761)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 966 (1761)
+... +... .... ....|... ..|..-.... +...+.+.
T Consensus 1292 q~~~---------l~~~----------~~~~-----~~~yW~~~--L~~~~~~~~l----------------p~~~~~~~ 1329 (3956)
T PRK12467 1292 QRQW---------MDAG----------ERAR-----QLAYWKAQ--LGGEQPVLEL----------------PTDRPRPA 1329 (3956)
T ss_pred HHHH---------hcCc----------hHHH-----HHHHHHHH--hcCCCCcccC----------------CCCCCCCc
Confidence 5321 0000 0000 00112110 0010000000 00111110
Q ss_pred CCCCcccccccccccc--hhhhcccccccccccccchhccccceeeecchhhh-hhhccccccccchhhhHHHHhhhccc
Q psy14338 967 PSESSNHATHRQNDSG--RQQICSSLIQPKCDQTSQVEKLHDAVFVVGALDET-IMLRGMRYHPIDIENSVMRAHKKIAE 1043 (1761)
Q Consensus 967 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1761)
.....+. ......+. ...+.....+. .......++ ...... ....|.. .+-+...+........+
T Consensus 1330 ~~~~~~~-~~~~~l~~~~~~~L~~~a~~~---~vT~~~vl~------aA~a~lL~r~sg~~--dvv~G~pvsgR~~~~~~ 1397 (3956)
T PRK12467 1330 VQSHRGA-RLAFELPPALAEGLRALARRE---GVTLFMLLL------ASFQTLLHRYSGQD--DIRVGVPIANRNRAETE 1397 (3956)
T ss_pred ccCcCce-EEEEEeCHHHHHHHHHHHHHh---CCCHHHHHH------HHHHHHHHHhhCCC--CEEEEecccCCCchhhh
Confidence 0000000 00000000 00000000000 000000000 000000 0000000 00000000000011123
Q ss_pred cceeeecceEEEEEeccCCcccccchhhhHHhhhh----------------c-----cceEEEeEEEeeCCCccc--cCC
Q psy14338 1044 CAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVL----------------E-----EHHLIVGVAVVVDPGVVP--INS 1100 (1761)
Q Consensus 1044 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-----~~~~~~~~~~~~~~~~~~--~~~ 1100 (1761)
..++.|.|+++++++++...++...+.......+. . .+...+...+.++..... ...
T Consensus 1398 ~~vG~fvNtlplR~~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~i~~~l~~~r~~~~~pLFq~~~~~~~~~~~~~~~~ 1477 (3956)
T PRK12467 1398 GLIGFFVNTQVLRAEVDGQASFQQLLQQVKQAALEAQAHQDLPFEQLVEALQPERSLSHSPLFQVMFNHQRDDHQAQAQL 1477 (3956)
T ss_pred cceeeeeeeeEEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHHHHHHhcccccCCCCCceeEEEEeecccccccccC
Confidence 45778889999999887765433222111100000 0 001111111111110000 000
Q ss_pred Cc-----------hhh------------hhhhhcccccCCCCcccc-------------cccCCCCCCccccccCC-hhh
Q psy14338 1101 RG-----------EKQ------------RMHLRDGFLADQLDPIYI-------------WVQSPHNASGYFSLYGD-ESE 1143 (1761)
Q Consensus 1101 ~~-----------~~~------------~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~-~~~ 1143 (1761)
.+ ... ...+...|..+.|+...+ ....|....+.+.+... +..
T Consensus 1478 ~~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~~~ 1557 (3956)
T PRK12467 1478 PGLSVESLSWESQTAQFDLTLDTYESSEGLQASLTYATDLFEASTIERLAGHWLNLLQGLVADPERRLGELDLLDEAERR 1557 (3956)
T ss_pred CCceeEeeecCCcccccceEEEEEecCCeEEEEEEEeCCcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccccchHHhh
Confidence 00 000 000111122222222111 11122222222222111 111
Q ss_pred HHHHhhhccccCCCCc-ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCC
Q psy14338 1144 YAQQFSARLVTGNTGE-LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKIN 1222 (1761)
Q Consensus 1144 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~ 1222 (1761)
.+.. .+|.+..+ ....++++.|.+++. ++|+++|++ ++++.+||+||+++++++|++|.+. |++
T Consensus 1558 ~~~~----~~~~~~~~~~~~~~~~~~~~~~a~-----~~p~~~Av~-----~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~ 1622 (3956)
T PRK12467 1558 QILE----GWNATHTGYPLARLVHQLIEDQAA-----ATPEAVALV-----FGEQELTYGELNRRANRLAHRLIAL-GVG 1622 (3956)
T ss_pred hhHH----hhcCCccCCCccccHHHHHHHHHH-----hCCCCeEEE-----eCCcEEeHHHHHHHHHHHHHHHHHc-CCC
Confidence 1110 13444333 234678888888775 779999999 6778999999999999999999999 999
Q ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccccc
Q psy14338 1223 TGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDI 1302 (1761)
Q Consensus 1223 ~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~ 1302 (1761)
+|++|+|+++||+++++++|||+|+|++||||||.+|.+ |+.+++++++++++|++......+........+..
T Consensus 1623 ~~~~V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~------rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 1696 (3956)
T PRK12467 1623 PEVLVGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRE------RLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVL 1696 (3956)
T ss_pred CCCEEEEEccCCHHHHHHHHHhhccCceeeecCCCCCHH------HHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEe
Confidence 999999999999999999999999999999999999998 99999999999999998876554432111111111
Q ss_pred ccCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccC
Q psy14338 1303 KSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCG 1382 (1761)
Q Consensus 1303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 1382 (1761)
......... .....+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|+++.+.++.|+
T Consensus 1697 ~~~~~~~~~-----~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd 1771 (3956)
T PRK12467 1697 DQEDDWLEG-----YSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFD 1771 (3956)
T ss_pred ccccchhcc-----CCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEecCccHH
Confidence 111100000 011112234578999999999999999999999999999999999999999999999999999888
Q ss_pred hhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEe
Q psy14338 1383 LGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVV 1462 (1761)
Q Consensus 1383 ~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~ 1462 (1761)
++. +++|.+|++|+++++.++.. ..++..+++.|++++||+++++|++++.|.+. ......+++||.+++
T Consensus 1772 ~~~-~~~~~~L~~G~~lvi~~~~~-~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~--------~~~~~~~~~lr~v~~ 1841 (3956)
T PRK12467 1772 VSV-WELFWPLINGARLVIAPPGA-HRDPEQLIQLIERQQVTTLHFVPSMLQQLLQM--------DEQVEHPLSLRRVVC 1841 (3956)
T ss_pred HHH-HHHHHHHhCCCEEEEcChhh-cCCHHHHHHHHHHcCCeEEECCHHHHHHHHhh--------ccccccCCCceEEEE
Confidence 876 78999999999999988643 47899999999999999999999999999752 112345789999999
Q ss_pred ecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceec
Q psy14338 1463 VAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLE 1542 (1761)
Q Consensus 1463 gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1542 (1761)
|||++++ .+.++|.+.++. ..++|.||+||+++.++....... .+......+
T Consensus 1842 gGe~l~~-~~~~~~~~~~~~-----~~l~n~YG~TE~t~~~t~~~~~~~----------------------~~~~~~~~~ 1893 (3956)
T PRK12467 1842 GGEALEV-EALRPWLERLPD-----TGLFNLYGPTETAVDVTHWTCRRK----------------------DLEGRDSVP 1893 (3956)
T ss_pred ccccCCH-HHHHHHHHhCCC-----CeEEeCccCCcCEEeEEEEecccc----------------------ccccCCCCC
Confidence 9999999 777777766543 469999999998765432111000 000111356
Q ss_pred cccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccC
Q psy14338 1543 SGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTS 1622 (1761)
Q Consensus 1543 iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~ 1622 (1761)
||+|++|++++|+|++ ++++|.|++|||||+|+++++||+| +|++|+++|+.+|+.. +++|||||||+|||
T Consensus 1894 iG~p~~~~~~~vld~~-~~~vp~G~~GEl~i~G~~v~~GYl~---~p~~t~~~f~~~p~~~-~~~r~yrTGDl~~~---- 1964 (3956)
T PRK12467 1894 IGQPIANLSTYILDAS-LNPVPIGVAGELYLGGVGLARGYLN---RPALTAERFVADPFGT-VGSRLYRTGDLARY---- 1964 (3956)
T ss_pred cccccCCCEEEEECCC-CCCCCCCCceEEEeccccccccccC---ChhhhhhhCcCCCCCC-CCccceeccceEEE----
Confidence 9999999999999954 8999999999999999999999999 9999999999999853 46799999999999
Q ss_pred CCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee----CCeEEEEEEeCCCch
Q psy14338 1623 PAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW----TNLLVVVVELDGNES 1698 (1761)
Q Consensus 1623 ~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~----~~~~~a~v~~~~~~~ 1698 (1761)
++| |+ |+|+||+|||||++|+||+|+|||+ +|.+||+|.+|+|++. ++.+++||+......
T Consensus 1965 --~~d--------G~----l~~~GR~D~qVki~G~rIel~eIE~-~l~~~p~V~~a~vv~~~~~~~~~lva~vv~~~~~~ 2029 (3956)
T PRK12467 1965 --RAD--------GV----IEYLGRIDHQVKIRGFRIELGEIEA-RLREQGGVREAVVIAQDGANGKQLVAYVVPTDPGL 2029 (3956)
T ss_pred --CCC--------CC----EEEecccCceEEeCeEEechHHHHH-HHHhCCCcceEEEEEecCCCCcEEEEEEEecCccc
Confidence 899 99 9999999999999999999999999 8999999999999975 357889888643221
Q ss_pred ---------hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHH
Q psy14338 1699 ---------EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1699 ---------~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~ 1747 (1761)
..++++++++++ || .||+|+.|++++ +||+|+|||+||++|++..
T Consensus 2030 ~~~~~~~~~~~~~l~~~l~~~-Lp-~ymvP~~~~~l~--~lP~t~~GKidr~~L~~~~ 2083 (3956)
T PRK12467 2030 VDDDEAQVALRAILKNHLKAS-LP-EYMVPAHLVFLA--RMPLTPNGKLDRKALPAPD 2083 (3956)
T ss_pred ccccccccccHHHHHHHHHhh-Cc-hhhCchhhhhhh--cCCCCCCCCcchhhCCCCc
Confidence 345799999987 98 999999999999 9999999999999998764
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-140 Score=1600.90 Aligned_cols=1445 Identities=16% Similarity=0.175 Sum_probs=946.7
Q ss_pred CcHHHHHHhcCCCCCCCCCCCCCCcCCCCCCccccC-------CCcchhHHHHHHHHhhhcCCCcEEEEECCCCceeEEE
Q psy14338 41 DDDIELEIAANPKDPNAPKPEGGVMTPAPGESLVVP-------SGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITL 113 (1761)
Q Consensus 41 ~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~-------~~~~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~l 113 (1761)
.++..+++ ....+|+.++.+++++++.+...+... .....+++++|+++++++|+++|+++++ +.+
T Consensus 1528 ~~~~~lL~-~l~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~~~------~~l 1600 (3956)
T PRK12467 1528 GHWLNLLQ-GLVADPERRLGELDLLDEAERRQILEGWNATHTGYPLARLVHQLIEDQAAATPEAVALVFGE------QEL 1600 (3956)
T ss_pred HHHHHHHH-HHhhCccCceeeccccchHHhhhhHHhhcCCccCCCccccHHHHHHHHHHhCCCCeEEEeCC------cEE
Confidence 44555565 555666666666666666555443211 1123589999999999999999999866 689
Q ss_pred eHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHH
Q psy14338 114 TYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGF 193 (1761)
Q Consensus 114 TY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~ 193 (1761)
||+||+++++++|++|+ +.|+++|++|+|+++|| +++++++|||+|+|++||||||.+|.+ |+.+
T Consensus 1601 TY~eL~~~a~~lA~~L~--------~~Gv~~~~~V~l~~~~s--~~~vv~~lavlkaG~~~vpldp~~p~~-----rl~~ 1665 (3956)
T PRK12467 1601 TYGELNRRANRLAHRLI--------ALGVGPEVLVGIAVERS--LEMVVGLLAILKAGGAYVPLDPEYPRE-----RLAY 1665 (3956)
T ss_pred eHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEccCC--HHHHHHHHHhhccCceeeecCCCCCHH-----HHHH
Confidence 99999999999999999 89999999999999999 999999999999999999999999976 9999
Q ss_pred HHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEE
Q psy14338 194 LLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVT 273 (1761)
Q Consensus 194 il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~ 273 (1761)
|+++++++++|++......+.......++..+.. +..........+.....++++|||+|||||||+||||+
T Consensus 1666 il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~ 1737 (3956)
T PRK12467 1666 MIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQE--------DDWLEGYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAG 1737 (3956)
T ss_pred HHHhCCCCEEEeChhhhhhCccccCCcEEEeccc--------cchhccCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEE
Confidence 9999999999998876554432211111111110 00001111112233457899999999999999999999
Q ss_pred EchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEe
Q psy14338 274 VTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVV 353 (1761)
Q Consensus 274 ~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~ 353 (1761)
++|+++++.+.+....++++++|++++++|++||+++++ +|.+|++|+|+|++++.. ..+|..+++.|+++++|++++
T Consensus 1738 ~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~lvi~~~~~-~~~~~~l~~~i~~~~vt~~~~ 1815 (3956)
T PRK12467 1738 NRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSVWE-LFWPLINGARLVIAPPGA-HRDPEQLIQLIERQQVTTLHF 1815 (3956)
T ss_pred EcCHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHHH-HHHHHhCCCEEEEcChhh-cCCHHHHHHHHHHcCCeEEEC
Confidence 999999999999999999999999999999999999996 999999999999998654 568999999999999999999
Q ss_pred cCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcc
Q psy14338 354 KSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVN 433 (1761)
Q Consensus 354 ~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 433 (1761)
|| +++..++.... ....+++||.+++| ||+++++++++|.+.++.. .++|.||||||+++++......
T Consensus 1816 ~P-s~~~~l~~~~~-~~~~~~~lr~v~~g--Ge~l~~~~~~~~~~~~~~~-----~l~n~YG~TE~t~~~t~~~~~~--- 1883 (3956)
T PRK12467 1816 VP-SMLQQLLQMDE-QVEHPLSLRRVVCG--GEALEVEALRPWLERLPDT-----GLFNLYGPTETAVDVTHWTCRR--- 1883 (3956)
T ss_pred CH-HHHHHHHhhcc-ccccCCCceEEEEc--cccCCHHHHHHHHHhCCCC-----eEEeCccCCcCEEeEEEEeccc---
Confidence 96 47777765322 23457899999999 9999999999999887532 4999999999998776443210
Q ss_pred cCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccc
Q psy14338 434 ATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLS 513 (1761)
Q Consensus 434 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T 513 (1761)
.........+||+|++|++++|+|++++ +||.|++|||||+|+++++||+|+|++|
T Consensus 1884 ----------------------~~~~~~~~~~iG~p~~~~~~~vld~~~~--~vp~G~~GEl~i~G~~v~~GYl~~p~~t 1939 (3956)
T PRK12467 1884 ----------------------KDLEGRDSVPIGQPIANLSTYILDASLN--PVPIGVAGELYLGGVGLARGYLNRPALT 1939 (3956)
T ss_pred ----------------------cccccCCCCCcccccCCCEEEEECCCCC--CCCCCCceEEEeccccccccccCChhhh
Confidence 0001123578999999999999999887 6999999999999999999999999999
Q ss_pred cccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEE
Q psy14338 514 NTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS 593 (1761)
Q Consensus 514 ~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~ 593 (1761)
+++|+++|++.+| +|||||||+|||++||+|+|+||+|+|||+||+||||+|||++|.++++| .+|+|++
T Consensus 1940 ~~~f~~~p~~~~~-----~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V-----~~a~vv~ 2009 (3956)
T PRK12467 1940 AERFVADPFGTVG-----SRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGV-----REAVVIA 2009 (3956)
T ss_pred hhhCcCCCCCCCC-----ccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCc-----ceEEEEE
Confidence 9999999996543 79999999999999999999999999999999999999999999999888 7899998
Q ss_pred EecCCCceEEEEEEeCCCC----------CHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHH
Q psy14338 594 IRVLRDERICVIAEQRPDC----------SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR 663 (1761)
Q Consensus 594 ~~~~~~~~l~a~v~~~~~~----------~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~ 663 (1761)
.++.++++++||+++..+. ..++++++|++.||.||+|+.+ +.+++||+|+||||||++|++.
T Consensus 2010 ~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~-------~~l~~lP~t~~GKidr~~L~~~ 2082 (3956)
T PRK12467 2010 QDGANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHL-------VFLARMPLTPNGKLDRKALPAP 2082 (3956)
T ss_pred ecCCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhh-------hhhhcCCCCCCCCcchhhCCCC
Confidence 8766678999999875431 3468999999999999999986 7789999999999999999875
Q ss_pred HHcCC--------CCcceeeecccccccCCCC------CccccCCCccccchhhhccccCCCCcccccCCCcccc-----
Q psy14338 664 FLEGN--------LHPANVLLCPHTCVTNLPK------PREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVT----- 724 (1761)
Q Consensus 664 ~~~~~--------~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 724 (1761)
..... .+.+..+...|..+++++. ..+..|+|+.+.++..+..+.+.......++.+.++.
T Consensus 2083 ~~~~~~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~g~~l~~~~if~~~ti~~la~~ 2162 (3956)
T PRK12467 2083 DASELQQAYVAPQSELEQRLAAIWQDVLGLEQVGLHDNFFELGGDSIISIQVVSRARQAGIRFTPKDLFQHQTVQSLAAV 2162 (3956)
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHhCCCccCCCCChhhcCCchHHHHHHHHHHHHcCCCCCHHHHhcCCCHHHHHHH
Confidence 43211 1111223345555555432 1123334655544433221110000000000000000
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 725 -------------------------------------------------------------------------------- 724 (1761)
Q Consensus 725 -------------------------------------------------------------------------------- 724 (1761)
T Consensus 2163 ~~~~~~~~~~~~~~~~~~~~l~p~q~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~a~~~l~~~h~~lr~~f~~~~~~ 2242 (3956)
T PRK12467 2163 AQEGDGTVSIDQGPVTGDLPLLPIQQMFFADDIPERHHWNQSVLLEPREALDAELLEAALQALLVHHDALRLGFVQEDGG 2242 (3956)
T ss_pred HhhcccccccccccccCcCCCCHHHHHHHhccccccccccceeeeeccCCcCHHHHHHHHHHHHhcccceeeeEecCCCc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 725 -------------------------------------------------------------------------------- 724 (1761)
Q Consensus 725 -------------------------------------------------------------------------------- 724 (1761)
T Consensus 2243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~l~~~~~~~~~l~l~~hHl~~Dg~S~~ill~d 2322 (3956)
T PRK12467 2243 WSAMHRAPEQERRPLLWQVVVADKEELEALCEQAQRSLDLEEGPLLRAVLATLPDGSQRLLLVIHHLVVDGVSWRILLED 2322 (3956)
T ss_pred eeEEecccccccchhhhhcccCCHHHHHHHHHHHHhCcCcccCcEEEEEEEEcCCCCceEEEeEeeheeccchHHHHHHH
Confidence
Q ss_pred --------------CCCCC-----------------------------------------c-------------------
Q psy14338 725 --------------NLPKP-----------------------------------------R------------------- 730 (1761)
Q Consensus 725 --------------~~~~~-----------------------------------------~------------------- 730 (1761)
.++.. .
T Consensus 2323 l~~~y~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 2402 (3956)
T PRK12467 2323 LQTAYRQLQGGQPVKLPAKTSAFKAWAERLQTYAASAALADELGYWQAQLQGASTELPCDHPQGGLQRRHAASVTTHLDS 2402 (3956)
T ss_pred HHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHhcCchhHHHHHHHHHhhcCCCccCCcCCcccccccccceEEEEEeCH
Confidence 00000 0
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 731 -------------------------------------------------------------------------------- 730 (1761)
Q Consensus 731 -------------------------------------------------------------------------------- 730 (1761)
T Consensus 2403 ~~t~~ll~~~~~~~~~~~~~~ll~a~~~~~~~~~~~~~~~i~~~~~gR~~~~~~~d~~~~vG~ft~~~p~~~~~~~~~~~ 2482 (3956)
T PRK12467 2403 EWTRRLLQEAPAAYRTQVNDLLLTALARVIARWTGQASTLIQLEGHGREDLFDEIDLTRTVGWFTSLYPVKLSPTASLAT 2482 (3956)
T ss_pred HHHHHHHHHhHHHhCCCHHHHHHHHHHHHHHHhcCCCceEEeccccCccccccccchhhhhccccccceeeecccccHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 731 -------------------------------------------------------------------------------- 730 (1761)
Q Consensus 731 -------------------------------------------------------------------------------- 730 (1761)
T Consensus 2483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2562 (3956)
T PRK12467 2483 SIKTIKEQLRAVPNKGLGFGVLRYLGSEAARQTLQALPVPRITFNYLGQFDGSFDAEKQALFVPSGEFSGAEQSEEAPLG 2562 (3956)
T ss_pred HHHHHHHHHHhCcccCcceeeeecccchhhhhHhhcCCccceehhhhcCccccccccccccccccccccccccCccchhh
Confidence
Q ss_pred ------------------------------------------------------------------------------cc
Q psy14338 731 ------------------------------------------------------------------------------EI 732 (1761)
Q Consensus 731 ------------------------------------------------------------------------------~~ 732 (1761)
..
T Consensus 2563 ~~~~~~~~~~~~~l~~~~~~~~~~f~~~~i~~la~~~~~~l~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 2642 (3956)
T PRK12467 2563 NWLSINGQVYGGELNLGWTFSQEMFDEATIQRLADAYAEELRALIEHCCSNDQRGVTPSDFPLAGLSQEQLDRLPVAVGD 2642 (3956)
T ss_pred hheeeccEEEcCeeEEEEEEchhhcCHHHHHHHHHHHHHHHHHHHHHhhccCCCCcCcccCcccccCHHHHHhhcccccc
Confidence 00
Q ss_pred CCCCCcccccccceeccccccccccCCC-------CCCCccc-chhhhhHHHHHHHHHHhhhccCC-ceEEEEecCccc-
Q psy14338 733 HSDIGPASVMVGNIVQGNRLASAQGRDM-------GGPMEED-SDATRKHQFISEILKWRAASTSE-HVIFTLLNSKGS- 802 (1761)
Q Consensus 733 ~~~~~~~s~~~~~~~~~~~l~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~- 802 (1761)
..++.|.|++|+++|.........+... ..++.+. ......+...+++||.++..... ....+++.....
T Consensus 2643 ~ediyPlsp~Q~gll~~~~~~~~~~~Y~~~~~~~l~gld~~~l~~A~~~vv~rH~~LRT~f~~~~~~~~~~Qvv~~~~~~ 2722 (3956)
T PRK12467 2643 IEDIYPLSPMQQGMLFHTLYEGGAGDYINQMRVDVEGLDVERFRTAWQAVIDRHEILRSGFLWDGELEEPLQVVYKQARL 2722 (3956)
T ss_pred cccccccChhhhhhhhhhccccCCCcceeeeEEEecCCCHHHHHHHHHHHHHHhhhhheEEEecCCCCCceEEEcccccC
Confidence 0000111111111111000000000000 0000000 00111111223444444332221 011122211100
Q ss_pred cccccchhHH---hHHHHHHHHHH-hh-------------hhhcccCCceeeecCCccc-----------hhhhhhcccc
Q psy14338 803 AAQLLTCSQL---HKRAERVGALL-LE-------------RAKINTGDHVALIFPPGID-----------LICAFYGCLY 854 (1761)
Q Consensus 803 ~~~~~~~~~~---~~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~~~ 854 (1761)
....+.|... ......+.... .. ..+...+.+.+++..||+- .+.+.|.
T Consensus 2723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~R~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~--- 2799 (3956)
T PRK12467 2723 PFSRLDWRDRADLEQALDALAAADRQQGFDLLSAPLLRLTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYF--- 2799 (3956)
T ss_pred ceeEeecccchhHHHHHHHHHHhhhhcCCCCCCCcceEEEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhc---
Confidence 0011111111 11111111100 00 0122345566666677651 2333332
Q ss_pred ccccccccCCCCCcccccCCchhhhHHHHhh-------------hhccccccc--h-hhhhhcCccchhhhh---hh---
Q psy14338 855 VGAVPVTIRPPHPQNLQTTLPTHQFISEILK-------------WRAASTSEH--V-IFTLLNSKGSAAQLL---TC--- 912 (1761)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~--~-~~~~~~~~~~~~~~~---~~--- 912 (1761)
+... +..+ ..+.++.. |+..-.... . +.............. ..
T Consensus 2800 -~~~~-~~~~-------------~~y~dy~~~~~~~~~~~~~~yW~~~L~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 2864 (3956)
T PRK12467 2800 -GQPP-PARE-------------GRYRDYIAWLQAQDAEASEAFWKEQLAALEEPTRLARALYPAPAEAVAGHGAHYLHL 2864 (3956)
T ss_pred -CCCC-CCCC-------------CCHHHHHHHHhcccHHHHHHHHHHHhcCCCcccccccccCCCccccccCcceEEEEc
Confidence 2111 0000 01222222 333211000 0 000000000000000 00
Q ss_pred -hccchhhh------------HHHHHHhhhhhccCCCcccccC-----C----CcccccccccccccCCCCCCCCCCCCC
Q psy14338 913 -SQLHKRAE------------RVGALLLERAKINTGDHVALIF-----P----PGIDLICAFYGCLCCPSNHPTPSPSES 970 (1761)
Q Consensus 913 -~~~~~~~~------------~~~~~l~~~~~~~~g~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 (1761)
.....++. -+.+.+......|+|....+++ + +.++.+.+. .
T Consensus 2865 ~~~~~~~L~~~a~~~~vT~~~v~~aAwa~~L~~~tg~~dv~fG~~vsGR~~~~~~~e~~vG~-----------------f 2927 (3956)
T PRK12467 2865 DATQTRQLIEFARRHRVTLNTLVQGAWLLLLQRFTGQDTVCFGATVAGRPAQLRGAEQQLGL-----------------F 2927 (3956)
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCCCEEEEeeeCCCCCCccChhhheee-----------------e
Confidence 00000000 0111111122335555433332 0 011112221 1
Q ss_pred cccccccccccchhhhcc---------------ccccc-ccccc--cchhccccceeeecchhhhhh-----hccccccc
Q psy14338 971 SNHATHRQNDSGRQQICS---------------SLIQP-KCDQT--SQVEKLHDAVFVVGALDETIM-----LRGMRYHP 1027 (1761)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~---------------~~~~~-~~~~~--~~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~ 1027 (1761)
.+....|.+....+.+.. ++... .+.+. .....++++++++++...... ..++....
T Consensus 2928 intlp~r~~~~~~~~~~~~l~~v~~~~~~~~~h~~~~~~~i~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3007 (3956)
T PRK12467 2928 INTLPVIASPRAEQTVSDWLQQVQAQNLALREFEHTPLADIQRWAGQGGEALFDSILVFENYPISEALKQGAPSGLRFGA 3007 (3956)
T ss_pred eeceeEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHHHHHhhccCCCCCcceEEEeecCCchhhhhccCCCCceeec
Confidence 111111111111100000 00000 00000 001234555555554321000 00000000
Q ss_pred cchhhhHHHHhhhccccceeeecceEEEEEeccCCcccccchhhhHHhhhhccceEEEeEEEeeCCCccccCCCchhhhh
Q psy14338 1028 IDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRM 1107 (1761)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1107 (1761)
+.. .....+.+.+.. ..... +.....++...+.. ...+
T Consensus 3008 ~~~-----------------------------~~~~~~~l~l~~------~~~~~--~~~~~~y~~~~~~~---~~~~-- 3045 (3956)
T PRK12467 3008 VSS-----------------------------REQTNYPLTLAV------GLGDT--LELEFSYDRQHFDA---AAIE-- 3045 (3956)
T ss_pred ccc-----------------------------cccccCceEEEe------ccCcc--eeEEEEechhhCCH---HHHH--
Confidence 000 000000000000 00000 11111111111110 0000
Q ss_pred hhhcccccCCCCccc-ccccCCCCCCccccccCC-hhhHH-HHhhhccccCCCCc-ccccccccccccccCCCCcCCCCC
Q psy14338 1108 HLRDGFLADQLDPIY-IWVQSPHNASGYFSLYGD-ESEYA-QQFSARLVTGNTGE-LYARTGYLGFLRRTSPAGVAGAPV 1183 (1761)
Q Consensus 1108 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~P~ 1183 (1761)
.+... |..+. .+...|....+.+.+... +...+ . -+|.+... ....++++.|.+++. ++|+
T Consensus 3046 ~~~~~-----~~~~l~~~~~~p~~~~~~l~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~a~-----~~p~ 3110 (3956)
T PRK12467 3046 RLAES-----FDRLLQAMLNNPAARLGELPTLAAHERRQVLH-----AWNATAAAYPSERLVHQLIEAQVA-----RTPE 3110 (3956)
T ss_pred HHHHH-----HHHHHHHHHhCcCCchhhccCCCHHHHHHHHH-----hhccCCCCCCccccHHHHHHHHHH-----hCCC
Confidence 00000 00000 011222222222322221 11111 1 23544333 334688999988876 7799
Q ss_pred CCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCcc
Q psy14338 1184 PPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQ 1263 (1761)
Q Consensus 1184 ~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~ 1263 (1761)
++||+ ++++++||+||+++++++|++|++. |+++|++|+|+++||+++++++|||+|+|++||||||.+|.+
T Consensus 3111 ~~Av~-----~~~~~lTY~eL~~~a~~lA~~L~~~-gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~-- 3182 (3956)
T PRK12467 3111 APALV-----FGDQQLSYAELNRRANRLAHRLIAI-GVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRE-- 3182 (3956)
T ss_pred cceEe-----eCCcccCHHHHHHHHHHHHHHHHHc-CCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHH--
Confidence 99999 6778999999999999999999998 999999999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCC
Q psy14338 1264 TTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGM 1343 (1761)
Q Consensus 1264 ~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~ 1343 (1761)
|+.+++++++++++|++......+........+..... .........+.....++++|||+|||||||+
T Consensus 3183 ----rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~ 3251 (3956)
T PRK12467 3183 ----RLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRL-------DLNGYSENNPSTRVMGENLAYVIYTSGSTGK 3251 (3956)
T ss_pred ----HHHHHHhCCCCcEEEechhhhhhcccccCCceeeecch-------hhcccCCCCCcccCCCCceEEEEEccCCCCC
Confidence 99999999999999999877555432211111111110 0000011112234678999999999999999
Q ss_pred CceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCc
Q psy14338 1344 LAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 1423 (1761)
Q Consensus 1344 PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~v 1423 (1761)
||||+++|+++++.+.+....++++++|++++++++.|+.+. +++|.+|+.|+++++.+. . .+++..+++.|++++|
T Consensus 3252 PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~l~i~~~-~-~~~~~~l~~~i~~~~v 3328 (3956)
T PRK12467 3252 PKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQ-ERFLWTLICGGCLVVRDN-D-LWDPEELWQAIHAHRI 3328 (3956)
T ss_pred cceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHH-HHHHHHHhCCCEEEECCc-c-cCCHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999998888775 789999999999999883 2 4799999999999999
Q ss_pred eEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceee
Q psy14338 1424 RDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAIC 1503 (1761)
Q Consensus 1424 t~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~ 1503 (1761)
|+++++|++++.+++. ....++++||.+++|||++++ .+.++|.+.++. ..++|.||+||+++.+
T Consensus 3329 t~~~~~Ps~l~~l~~~---------~~~~~~~~lr~~~~gGe~~~~-~~~~~~~~~~~~-----~~l~n~YG~TE~~~~~ 3393 (3956)
T PRK12467 3329 SIACFPPAYLQQFAED---------AGGADCASLDIYVFGGEAVPP-AAFEQVKRKLKP-----RGLTNGYGPTEAVVTV 3393 (3956)
T ss_pred EEEEcCHHHHHHHHhc---------ccccCCCCceEEEEecCCCCH-HHHHHHHHhCCC-----CEEEeCcccchhEeee
Confidence 9999999999998752 234567899999999999999 777888776543 5799999999987755
Q ss_pred ecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCccccccc
Q psy14338 1504 LQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYF 1583 (1761)
Q Consensus 1504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~ 1583 (1761)
+....... ........+||+|++|++++|+|++ ++++|+|++|||+|+|+++++||+
T Consensus 3394 ~~~~~~~~----------------------~~~~~~~~~iG~p~~~~~~~v~d~~-~~~vp~G~~GEL~i~G~~v~~GY~ 3450 (3956)
T PRK12467 3394 TLWKCGGD----------------------AVCEAPYAPIGRPVAGRSIYVLDGQ-LNPVPVGVAGELYIGGVGLARGYH 3450 (3956)
T ss_pred EEEecccc----------------------cccCCCCCCCccccCCCEEEEECCC-CCCCCCCCCceEEEcchhhhhhcc
Confidence 43211000 0001123579999999999999955 899999999999999999999999
Q ss_pred CCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHH
Q psy14338 1584 SLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPID 1663 (1761)
Q Consensus 1584 ~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~e 1663 (1761)
| +|++|+++|+.+||.. +++|||||||+||| ++| |+ |+|+||+|+|||+||+||+|+|
T Consensus 3451 ~---~~~~T~~~F~~~p~~~-~g~r~yrTGDl~~~------~~d--------G~----l~~~GR~d~~iki~G~rIe~~E 3508 (3956)
T PRK12467 3451 Q---RPSLTAERFVADPFSG-SGGRLYRTGDLARY------RAD--------GV----IEYLGRIDHQVKIRGFRIELGE 3508 (3956)
T ss_pred C---CcccchhhccCCCCCC-CCceeeccchhhee------cCC--------Cc----EEEeccccceEeeceEeecHHH
Confidence 9 9999999999999854 57899999999999 999 99 9999999999999999999999
Q ss_pred HHHHHHHhccCcceeEEEee----CCeEEEEEEeCC-CchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhh
Q psy14338 1664 IENSVMRAHKKIAECAVFTW----TNLLVVVVELDG-NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEK 1738 (1761)
Q Consensus 1664 IE~~~l~~~p~V~~a~Vv~~----~~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKv 1738 (1761)
||+ +|.+||+|.+|+|++. ++++++||+... .....++++++++++ || .||+|..|++++ +||+|+|||+
T Consensus 3509 IE~-~l~~~p~V~~a~v~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~-Lp-~y~vP~~~~~l~--~lP~t~~GKi 3583 (3956)
T PRK12467 3509 IEA-RLLQHPSVREAVVLARDGAGGKQLVAYVVPADPQGDWRETLRDHLAAS-LP-DYMVPAQLLVLA--AMPLGPNGKV 3583 (3956)
T ss_pred HHH-HHhhCcccceEEEEEecCCCCcEEEEEEeCCCCCcccHHHHHHHHhcc-CC-hhhCCCeeeeec--cCCCCCCCcc
Confidence 999 8999999999999974 458899998754 345667899999997 98 999999999999 9999999999
Q ss_pred hHHHHHHHHHc
Q psy14338 1739 QRMHLRDGFLA 1749 (1761)
Q Consensus 1739 dR~~L~~~~~~ 1749 (1761)
||++|++....
T Consensus 3584 dR~~L~~~~~~ 3594 (3956)
T PRK12467 3584 DRKALPDPDAK 3594 (3956)
T ss_pred chhhcCCCCcc
Confidence 99999987543
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-138 Score=1604.75 Aligned_cols=1460 Identities=16% Similarity=0.161 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHhccCCCCCCCcccccCcHHHHHHhcC-CCCCCCCCCCCCCcCCCCCCccccCCCcchhHHHHHHHHhh
Q psy14338 14 WKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAAN-PKDPNAPKPEGGVMTPAPGESLVVPSGLPRNLEAAIQRYGS 92 (1761)
Q Consensus 14 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~a~ 92 (1761)
.++..+|++++..+...+..++.+.-.....+...... ...+..+.+. ..+++++|+++++
T Consensus 1953 ~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~~~~~------------------~~~~~~~~~~~a~ 2014 (5163)
T PRK12316 1953 ERLDRHLLHLLEQMAEDAQAALGELALLDAGERQRILADWDRTPEAYPR------------------GPGVHQRIAEQAA 2014 (5163)
T ss_pred HHHHHHHHHHHHHHHhCcccccccccCCCHHHHHHHHHhcCCCCCCCCC------------------CCCHHHHHHHHHH
Q ss_pred hcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCC
Q psy14338 93 ATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGI 172 (1761)
Q Consensus 93 ~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~ 172 (1761)
++|+++|+++++ +++||+||+++++++|++|+ +.|+++|++|+|+++|| +++++++|||+|+|+
T Consensus 2015 ~~p~~~A~~~~~------~~lTy~eL~~~a~~lA~~L~--------~~gv~~g~~V~l~~~~s--~~~~~~~lAil~aGa 2078 (5163)
T PRK12316 2015 RAPEAIAVVFGD------QHLSYAELDSRANRLAHRLR--------ARGVGPEVRVAIAAERS--FELVVALLAVLKAGG 2078 (5163)
T ss_pred hCCCCeEEEcCC------CeEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHHHHHHHHHHhhce
Q ss_pred eEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCC
Q psy14338 173 VPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLT 252 (1761)
Q Consensus 173 ~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (1761)
+||||||.+|.+ |+.+++++++++++|+++.....+........+... ............+.....
T Consensus 2079 ~~vpld~~~p~~-----rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 2144 (5163)
T PRK12316 2079 AYVPLDPNYPAE-----RLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLD---------RDAEWADYPDTAPAVQLA 2144 (5163)
T ss_pred EEeecCCCCCHH-----HHHHHHHhcCCCEEEeChhhhhhcccccccceEecc---------chhhhhccCccCCCCCCC
Q ss_pred CCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccc
Q psy14338 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALM 332 (1761)
Q Consensus 253 ~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~ 332 (1761)
|+++|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++||+++++ +|.+|+.|+|+|+.+..
T Consensus 2145 ~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~~~~~~~~-- 2221 (5163)
T PRK12316 2145 GENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQ-WFHPLLNGARVLIRDDE-- 2221 (5163)
T ss_pred CCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHH-HHHHHhCCCEEEeCCcc--
Q ss_pred cCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcccc
Q psy14338 333 KVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICP 412 (1761)
Q Consensus 333 ~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n 412 (1761)
.+++..+++.|+++++|+++++|+ ++..+........... +||.+++| ||+++++++++|.+.++.. .++|
T Consensus 2222 ~~~~~~~~~~i~~~~vt~~~~~P~-~~~~l~~~~~~~~~~~-~lr~~~~g--Ge~l~~~~~~~~~~~~~~~-----~l~n 2292 (5163)
T PRK12316 2222 LWDPEQLYDEMERHGVTILDFPPV-YLQQLAEHAERDGRPP-AVRVYCFG--GEAVPAASLRLAWEALRPV-----YLFN 2292 (5163)
T ss_pred cCCHHHHHHHHHHcCCeEEEcChH-HHHHHHhhhhcccCCc-ceeEEEEe--cccCCHHHHHHHHHhCCCc-----EEEE
Q ss_pred ccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCc
Q psy14338 413 CASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492 (1761)
Q Consensus 413 ~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~ 492 (1761)
.||||||++.++..... ..........+||+|++|++++|+|++++ +||.|++
T Consensus 2293 ~YG~TE~~~~~~~~~~~-------------------------~~~~~~~~~~~iG~p~~~~~~~i~d~~~~--~vp~g~~ 2345 (5163)
T PRK12316 2293 GYGPTEAVVTPLLWKCR-------------------------PQDPCGAAYVPIGRALGNRRAYILDADLN--LLAPGMA 2345 (5163)
T ss_pred Cccchhheeeeeeeecc-------------------------cccccCCCcCCcccccCCCEEEEECCCCC--CCCCCCe
Q ss_pred eEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHH
Q psy14338 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDII 572 (1761)
Q Consensus 493 GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE 572 (1761)
|||||+|+++++||||+|++|+++|+++||...| +|||||||+||+++||+|+|+||+|+|||+||+||||+|||
T Consensus 2346 GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~-----~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE 2420 (5163)
T PRK12316 2346 GELYLGGEGLARGYLNRPGLTAERFVPDPFSASG-----ERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIE 2420 (5163)
T ss_pred eEEEecchhhcccccCChhhhhhhccCCCCCCCC-----CeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHH
Q ss_pred HHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCC
Q psy14338 573 ATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKT 650 (1761)
Q Consensus 573 ~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t 650 (1761)
++|.++++| .+++|++.++..++.++||+++..+ .+.++++++|+++||.||+|..+ +.+++||+|
T Consensus 2421 ~~l~~~~~v-----~~a~v~~~~~~~~~~l~a~v~~~~~~~~~~~~l~~~l~~~Lp~~~vP~~~-------~~l~~lP~t 2488 (5163)
T PRK12316 2421 ARLQAHPAV-----REAVVVAQDGASGKQLVAYVVPDDAAEDLLAELRAWLAARLPAYMVPAHW-------VVLERLPLN 2488 (5163)
T ss_pred HHHhhCccc-----ceEEEEEEecCCCeEEEEEEEecCCCccCHHHHHHHHHhhCchhcCcceE-------eeecccCCC
Q ss_pred CCCcccHHHHHHHHHcCCCCc--------ceeeecccccccCC------CCCccccCCCccccchhhhcccc-CCCCccc
Q psy14338 651 PLGGIHLSECKRRFLEGNLHP--------ANVLLCPHTCVTNL------PKPREIHSGNCLAGQCKRRFLEG-NLHPANV 715 (1761)
Q Consensus 651 ~~GKidR~~L~~~~~~~~~~~--------~~~~~~~~~~v~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 715 (1761)
+||||||++|++......... +..+...|..++.+ ....+..|+|+.+.++...+.+. .......
T Consensus 2489 ~~GKidR~~L~~~~~~~~~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~ 2568 (5163)
T PRK12316 2489 PNGKLDRKALPKPDVSQLRQAYVAPQEGLEQRLAAIWQAVLKVEQVGLDDHFFELGGHSLLATQVVSRVRQDLGLEVPLR 2568 (5163)
T ss_pred CCCccCHhhcCCCccccccccccCCCCHHHHHHHHHHHHHhCCCccCCCCchhhhcchHHHHHHHHHHHHHHhCCCcCHH
Q ss_pred ccCCCccc-------------cCCCCCcccCCCCCcccccccceeccccccccccCCC--------CCCCccc-chhhhh
Q psy14338 716 LLCPHTCV-------------TNLPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDM--------GGPMEED-SDATRK 773 (1761)
Q Consensus 716 ~l~~~~~~-------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~--------~~~~~~~-~~~~~~ 773 (1761)
.+..+.++ ...+..........|.|..|+++|...++........ +.++.+. ...+..
T Consensus 2569 ~~f~~~ti~~la~~l~~~~~~~~~~~~~~~~~~~~pls~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~L~~A~~~ 2648 (5163)
T PRK12316 2569 ILFERPTLAAFAASLESGQTSRAPVLQKVTRVQPLPLSHAQQRQWFLWQLEPESAAYHLPSALHLRGVLDQAALEQAFDA 2648 (5163)
T ss_pred HHhhCccHHHHhhhhhhhhhccccccCCcccccCCCCChHHHhHHHHcccCCCccccccceEEEEcCCcCHHHHHHHHHH
Q ss_pred HHHHHHHHHHhhhccCCceEEEEecCccc-----cccccchhHHhHHHHHHHHHHhhhhh----------cccCCceeee
Q psy14338 774 HQFISEILKWRAASTSEHVIFTLLNSKGS-----AAQLLTCSQLHKRAERVGALLLERAK----------INTGDHVALI 838 (1761)
Q Consensus 774 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 838 (1761)
+...+++||.++..........+...... .........+.....+.......... ...+.+.+++
T Consensus 2649 lv~rH~~LRt~f~~~~~~~~q~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~l 2728 (5163)
T PRK12316 2649 LVLRHETLRTRFVEVGEQTRQVILPNMSLRIVLEDCAGVADAAIRQRVAEEIQRPFDLARGPLLRVRLLALDGQEHVLVI 2728 (5163)
T ss_pred HHHHhhHhhcceeeeCCeEEEEECCCCCccceeeccccCCHHHHHHHHHHHhhCCCCCCCCCcEEEEEEEECCCeEEEEE
Q ss_pred cCCcc-----------chhhhhhccccccccccccCCCCCcccccCCchhhhHHHHhhhhccccccchhhhhhcCccchh
Q psy14338 839 FPPGI-----------DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAA 907 (1761)
Q Consensus 839 ~~~~~-----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1761)
..||+ +.+...|.....|..+ ..-+....+.++..|+..
T Consensus 2729 ~~HHii~DG~S~~~l~~eL~~~Y~~~~~g~~~------------~l~~~~~~y~dy~~~~~~------------------ 2778 (5163)
T PRK12316 2729 TQHHIVSDGWSMQVMVDELVQAYAGARRGEQP------------TLPPLPLQYADYAAWQRA------------------ 2778 (5163)
T ss_pred ecCcCcccHhHHHHHHHHHHHHHHHHhcCCCC------------CCCCCCCCHHHHHHHHHH------------------
Q ss_pred hhhhhhccchhhhHHHHHHhhhhhccCCCcccccCCCcccccccccccccCCCCCCCCCCCCCcccc-cccccccchhhh
Q psy14338 908 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHA-THRQNDSGRQQI 986 (1761)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 986 (1761)
.+......-....|. +.+.+.......+...+.+......+.. ...........+
T Consensus 2779 ------~~~~~~~~~~~~yW~------------------~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~L 2834 (5163)
T PRK12316 2779 ------WMDSGEGARQLDYWR------------------ERLGGEQPVLELPLDRPRPALQSHRGARLDVALDVALSREL 2834 (5163)
T ss_pred ------HhcCchHHHHHHHHH------------------HHhcCCCCcccCCccCCCCccCCCCCceEEEECCHHHHHHH
Q ss_pred cccccccccccccchhccccceeeecchhhhhhhccccccccchhhhHHHHhhhccccceeeecceEEEEEeccCCcccc
Q psy14338 987 CSSLIQPKCDQTSQVEKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEA 1066 (1761)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 1066 (1761)
.....+............. .....+-.....+-+...+........+..++.|.|++++.+.++....+.
T Consensus 2835 ~~~a~~~~vT~~~~l~aA~----------a~~L~r~tg~~dv~iG~pvsgR~~~~~~~~iG~fvntlPlrv~l~~~~t~~ 2904 (5163)
T PRK12316 2835 LALARREGVTLFMLLLASF----------QVLLHRYSGQSDIRVGVPIANRNRAETERLIGFFVNTQVLRAQVDAQLAFR 2904 (5163)
T ss_pred HHHHHHhCCCHHHHHHHHH----------HHHHHHhcCCCceEEEeeecCCCchhHHhhhhheecceeEEEecCCCCCHH
Q ss_pred cchhhhHHhhhhccceEEEeEEEeeCCCccccCCCchhhhhh--------------------------------------
Q psy14338 1067 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMH-------------------------------------- 1108 (1761)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------- 1108 (1761)
..+............+...++..+.+.............++.
T Consensus 2905 ~ll~~v~~~~~~~~~hq~~p~~~iv~~l~~~r~~~~~plf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dL~l~v~ 2984 (5163)
T PRK12316 2905 DLLGQVKEQALGAQAHQDLPFEQLVEALQPERSLSHSPLFQVMYNHQSGERAAAQLPGLHIESFAWDGAATQFDLALDTW 2984 (5163)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHhccccccCCCCceeEEEeeeccccccccCCCceeEeeeccCCccceeeEEEEE
Q ss_pred -------hhcccccCCCCcccc-------------cccCCCCCCccccccCChhhHHHHhhhccccCCCCcccc-ccccc
Q psy14338 1109 -------LRDGFLADQLDPIYI-------------WVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYA-RTGYL 1167 (1761)
Q Consensus 1109 -------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1167 (1761)
+...|..+.|+...+ ....+....+.+.+.+.+....... .+|.+..+... .++|+
T Consensus 2985 ~~~~~l~~~~~y~~~~~~~~~i~~l~~~f~~lL~~l~~~p~~~i~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 3061 (5163)
T PRK12316 2985 ESAEGLGASLTYATDLFDARTVERLARHWQNLLRGMVENPQRSVDELAMLDAEERGQLLE---AWNATAAEYPLERGVHR 3061 (5163)
T ss_pred ecCCcEEEEEEECcCCCCHHHHHHHHHHHHHHHHHHHhCCCCchhhccCCCHHHHHHHHH---HhCCCCcCCCCcCCHHH
Q ss_pred ccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q psy14338 1168 GFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYV 1247 (1761)
Q Consensus 1168 ~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~a 1247 (1761)
.|.+++. ++|+++||. ++++.+||+||+++++++|++|.+. |+++|++|+|+++||+++++++|||+|+
T Consensus 3062 ~~~~~~~-----~~p~~~Av~-----~~~~~lTY~eL~~~~~~lA~~L~~~-gv~~~~~V~l~~~~s~~~iv~~lail~a 3130 (5163)
T PRK12316 3062 LFEEQVE-----RTPDAVALA-----FGEQRLSYAELNRRANRLAHRLIER-GVGPDVLVGVAVERSLEMVVGLLAILKA 3130 (5163)
T ss_pred HHHHHHH-----hCCCCeeEe-----eCCeEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEccCCHHHHHHHHHHHHh
Q ss_pred CCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCC
Q psy14338 1248 GAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPT 1327 (1761)
Q Consensus 1248 G~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1327 (1761)
|++||||||.+|.+ |+++|+++++++++|++... .+........+...... .......+.....
T Consensus 3131 Ga~~vpld~~~p~~------rl~~il~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 3194 (5163)
T PRK12316 3131 GGAYVPLDPEYPEE------RLAYMLEDSGAQLLLSQSHL--RLPLAQGVQVLDLDRGD--------ENYAEANPAIRTM 3194 (5163)
T ss_pred CceeeecCCCCcHH------HHHHHHHhcCCCEEEeCccc--cCCccCCccEEEecccc--------ccccccCCCCCCC
Q ss_pred CCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCcc
Q psy14338 1328 AEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 1407 (1761)
Q Consensus 1328 ~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~ 1407 (1761)
++++|||+|||||||+||||+++|+++++.+.++...++++++|+++++.++.|+.+. +++|.+|++|+++++.++..
T Consensus 3195 ~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~i~~~L~~G~~l~~~~~~~- 3272 (5163)
T PRK12316 3195 PENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVGDRVLQFTTFSFDVFV-EELFWPLMSGARVVLAGPED- 3272 (5163)
T ss_pred CCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhhCCCcccEEEeecCccHHHHH-HHHHHHHhCCCEEEEcChhh-
Q ss_pred ccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCC
Q psy14338 1408 EVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSP 1487 (1761)
Q Consensus 1408 ~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e 1487 (1761)
..++..+.+.++++++|++.++|+++..+++ ......+++||.+++|||++++ ++.++|...
T Consensus 3273 ~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~---------~~~~~~~~~lr~~~~gGe~l~~-~~~~~~~~~-------- 3334 (5163)
T PRK12316 3273 WRDPALLVELINSEGVDVLHAYPSMLQAFLE---------EEDAHRCTSLKRIVCGGEALPA-DLQQQVFAG-------- 3334 (5163)
T ss_pred cCCHHHHHHHHHHcCCcEEEcCHHHHHHHHh---------ccccccCCcceEEEEccccCCH-HHHHHHHhC--------
Q ss_pred ccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCc
Q psy14338 1488 RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSH 1567 (1761)
Q Consensus 1488 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~ 1567 (1761)
..++|.||+||+++.++........... ++||+|++|++++|+|++ ++++|+|+
T Consensus 3335 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~-------------------------~~iG~p~~~~~~~i~d~~-~~~~p~G~ 3388 (5163)
T PRK12316 3335 LPLYNLYGPTEATITVTHWQCVEEGKDA-------------------------VPIGRPIANRACYILDGS-LEPVPVGA 3388 (5163)
T ss_pred CcEeeccCCCccEeeEeEEeccCCCCCC-------------------------CccceecCCCEEEEECCC-CCCCCCCC
Q ss_pred ceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcc
Q psy14338 1568 LGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGA 1647 (1761)
Q Consensus 1568 ~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR 1647 (1761)
+|||||+|+++++||+| +|++|+++|+++|+ .+++|||||||+||+ ++| |+ |+|+||
T Consensus 3389 ~GEl~i~G~~v~~GY~~---~~~~t~~~f~~~p~--~~~~~~y~TGDl~~~------~~d--------G~----l~~~GR 3445 (5163)
T PRK12316 3389 LGELYLGGEGLARGYHN---RPGLTAERFVPDPF--VPGERLYRTGDLARY------RAD--------GV----IEYIGR 3445 (5163)
T ss_pred CceEEecccccchhcCC---ChhhchhhCCCCCC--CCCCeeEecCceEEE------CCC--------CC----EEEecc
Q ss_pred cCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-CeEEEEEEe-CCCchhHhhHHHHHHHHHhhhcCceeeEEEEE
Q psy14338 1648 LDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-NLLVVVVEL-DGNESEALDLVPLVTNAVLEEHHLIVGVAVVV 1725 (1761)
Q Consensus 1648 ~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-~~~~a~v~~-~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v 1725 (1761)
+|+|||++|+||||+|||+ +|.+||+|.+|+|++.. +.++|||+. .+.....++++++++++ || .||+|+.|+++
T Consensus 3446 ~d~qvKi~G~rIel~eIE~-~l~~~~~V~~a~v~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~-Lp-~ymvP~~~~~~ 3522 (5163)
T PRK12316 3446 VDHQVKIRGFRIELGEIEA-RLLEHPWVREAVVLAVDGRQLVAYVVPEDEAGDLREALKAHLKAS-LP-EYMVPAHLLFL 3522 (5163)
T ss_pred cCCeEeeCcEeeChHHHHH-HHHhCCCcceEEEEEccCCeEEEEEEcCCcCcccHHHHHHHHHhh-CC-cccCcceeeeH
Q ss_pred CCCCccCCCchhhhHHHHHH
Q psy14338 1726 DPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1726 ~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
+ +||+|+|||+||++|++
T Consensus 3523 ~--~lP~t~~GKvdr~~L~~ 3540 (5163)
T PRK12316 3523 E--RMPLTPNGKLDRKALPR 3540 (5163)
T ss_pred h--hcCCCCCcchhHHhcCC
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-134 Score=1553.50 Aligned_cols=1468 Identities=16% Similarity=0.160 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHhccCCCCCCCcccccCcHHHHHHhcCCCCCCCCCCCCCCcCCCCCCccccCCCcchhHHHHHHHHhhh
Q psy14338 14 WKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAPGESLVVPSGLPRNLEAAIQRYGSA 93 (1761)
Q Consensus 14 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~a~~ 93 (1761)
.++..+|.+++..+...+..++.+.......+... ...++...+.+. ..+++++|++++++
T Consensus 1083 ~~l~~~~~~~l~~~~~~p~~~~~~l~l~~~~~~~~-l~~~~~~~~~~~------------------~~~l~~~~~~~a~~ 1143 (4334)
T PRK05691 1083 ERLAEHFLALLEQVCEDPQRALGDVQLLDAAERAQ-LAQWGQAPCAPA------------------QAWLPELLNEQARQ 1143 (4334)
T ss_pred HHHHHHHHHHHHHHHhCcccchhhhcCCCHHHHHH-HHhccCCCCCCc------------------cCCHHHHHHHHHHh
Q ss_pred cCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCe
Q psy14338 94 TYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIV 173 (1761)
Q Consensus 94 ~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~ 173 (1761)
+|+++|+++++ +++||+||+++++++|++|+ +.|+++|++|+|+++|| .++++++|||+|+|++
T Consensus 1144 ~p~~~Al~~~~------~~lTY~eL~~~~~~lA~~L~--------~~gv~~g~~V~i~~~~s--~~~iv~~lailkaG~~ 1207 (4334)
T PRK05691 1144 TPERIALVWDG------GSLDYAELHAQANRLAHYLR--------DKGVGPDVCVAIAAERS--PQLLVGLLAILKAGGA 1207 (4334)
T ss_pred CCCCeEEEECC------ceEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHHHHHHHHHHHhCCE
Q ss_pred EEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCCC
Q psy14338 174 PVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTD 253 (1761)
Q Consensus 174 ~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (1761)
||||||.+|.+ |+.+++++++++++|++......+........+.. ............+.....+
T Consensus 1208 ~vpld~~~p~~-----rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 1272 (4334)
T PRK05691 1208 YVPLDPDYPAE-----RLAYMLADSGVELLLTQSHLLERLPQAEGVSAIAL----------DSLHLDSWPSQAPGLHLHG 1272 (4334)
T ss_pred EEecCcCChHH-----HHHHHHHhcCCCEEEecchhhhhcccccCceEEee----------ccccccccCCCCCCCCCCC
Q ss_pred CCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCcccc
Q psy14338 254 DTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMK 333 (1761)
Q Consensus 254 ~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~ 333 (1761)
+++|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++||+++++ +|.+|+.|+|+|++++.. .
T Consensus 1273 ~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~-~~~~L~~G~~l~i~~~~~-~ 1350 (4334)
T PRK05691 1273 DNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWE-CFWPLITGCRLVLAGPGE-H 1350 (4334)
T ss_pred CCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHH-HHHHHhCCCEEEEcCccc-c
Q ss_pred CCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccc
Q psy14338 334 VNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPC 413 (1761)
Q Consensus 334 ~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~ 413 (1761)
.++..+++.|+++++|++.+||+ ++..++...... .+++||.+++| ||+++++++++|.+.++.. .++|.
T Consensus 1351 ~~~~~l~~~i~~~~vt~~~~~Ps-~l~~l~~~~~~~--~~~~lr~~~~g--Ge~l~~~~~~~~~~~~~~~-----~l~n~ 1420 (4334)
T PRK05691 1351 RDPQRIAELVQQYGVTTLHFVPP-LLQLFIDEPLAA--ACTSLRRLFSG--GEALPAELRNRVLQRLPQV-----QLHNR 1420 (4334)
T ss_pred CCHHHHHHHHHHcCCeEEECcHH-HHHHHHhCcccc--cCCcccEEEEe--ecCCCHHHHHHHHHhCCCc-----EEEeC
Q ss_pred cccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCce
Q psy14338 414 ASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVG 493 (1761)
Q Consensus 414 YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~G 493 (1761)
||||||++.++... .........+||+|++|++++|+|++++ ++|.|++|
T Consensus 1421 YG~TE~~~~~~~~~----------------------------~~~~~~~~~~iG~p~~~~~~~i~d~~~~--~vp~G~~G 1470 (4334)
T PRK05691 1421 YGPTETAINVTHWQ----------------------------CQAEDGERSPIGRPLGNVLCRVLDAELN--LLPPGVAG 1470 (4334)
T ss_pred CCcChheeeeeeee----------------------------cccccCCCCcccceeCCCEEEEECCCCC--CCCCCCce
Q ss_pred EEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHH
Q psy14338 494 EICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIA 573 (1761)
Q Consensus 494 EL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~ 573 (1761)
||||+|+++++||+|+|++|+++|+.+|+...| .|||||||+|++++||+|+|+||+|+|||++|+||+|+|||+
T Consensus 1471 EL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~-----~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~ 1545 (4334)
T PRK05691 1471 ELCIGGAGLARGYLGRPALTAERFVPDPLGEDG-----ARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQA 1545 (4334)
T ss_pred EEEecCcccchhhcCCccccHhhCCCCCCCCCC-----ceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHH
Q ss_pred HHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCC
Q psy14338 574 TVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTP 651 (1761)
Q Consensus 574 ~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~ 651 (1761)
+|.++++| .+|+|++..+..++.+++|++...+ .+.++++++|+++||.||+|+.+ +.+++||+|+
T Consensus 1546 ~l~~~~~V-----~~a~v~~~~~~~~~~lva~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~-------~~~~~lP~t~ 1613 (4334)
T PRK05691 1546 RLLAQPGV-----AQAAVLVREGAAGAQLVGYYTGEAGQEAEAERLKAALAAELPEYMVPAQL-------IRLDQMPLGP 1613 (4334)
T ss_pred HHHhCCCc-----ceEEEEEeeCCCCCEEEEEEEeCCCCCCCHHHHHHHHHHhCccccCCcEE-------EEccccCCCC
Q ss_pred CCcccHHHHHH------HHHcCCCCcceeeecccccccCCC------CCccccCCCccccchhhhcccc-CCCCcccccC
Q psy14338 652 LGGIHLSECKR------RFLEGNLHPANVLLCPHTCVTNLP------KPREIHSGNCLAGQCKRRFLEG-NLHPANVLLC 718 (1761)
Q Consensus 652 ~GKidR~~L~~------~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 718 (1761)
||||||++|++ .......+.+..+...|..+++++ ...+..|+|+.+.++...+.+. +....-..++
T Consensus 1614 ~GKidr~~L~~~~~~~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~~~~~l~~~~~f 1693 (4334)
T PRK05691 1614 SGKLDRRALPEPVWQQREHVEPRTELQQQIAAIWREVLGLPRVGLRDDFFALGGHSLLATQIVSRTRQACDVELPLRALF 1693 (4334)
T ss_pred CCCcChhhcCcccccccccCCCCCHHHHHHHHHHHHHhCCCCCCCCCchHHhcccHHHHHHHHHHHHHHhCCCcchhhhh
Q ss_pred CCccc-----------------cCCCCCcccCCCCCcccccccceeccccccccccCCC--------CCCCccc-chhhh
Q psy14338 719 PHTCV-----------------TNLPKPREIHSDIGPASVMVGNIVQGNRLASAQGRDM--------GGPMEED-SDATR 772 (1761)
Q Consensus 719 ~~~~~-----------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~--------~~~~~~~-~~~~~ 772 (1761)
.+.++ ...+..........|.|..|+++|...++........ +.++.+. ...+.
T Consensus 1694 ~~~tl~~la~~i~~~~~~~~~~~~~~~~~~~~~~~~pls~~Q~~l~~~~~~~~~~~~Yn~~~~~~l~g~ld~~~L~~A~~ 1773 (4334)
T PRK05691 1694 EASELGAFAEQVARIQAAGERNSQGAIARVDRSQPVPLSYSQQRMWFLWQMEPDSPAYNVGGMARLSGVLDVDRFEAALQ 1773 (4334)
T ss_pred cCCcHHHHHHHhhhhhccccccccccccccccccCCCCCHHHHhHHHhhhccCCCcccceeeeehccCCCCHHHHHHHHH
Q ss_pred hHHHHHHHHHHhhhccCCceEEEEecCcc-----ccccccchhHHhHHHHHHHHHHhhh--------------hhcccCC
Q psy14338 773 KHQFISEILKWRAASTSEHVIFTLLNSKG-----SAAQLLTCSQLHKRAERVGALLLER--------------AKINTGD 833 (1761)
Q Consensus 773 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~ 833 (1761)
.+...+++||.++..........+..... .....++.......+.++....... .....+.
T Consensus 1774 ~lv~rH~~LRT~f~~~~~~~~q~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~ 1853 (4334)
T PRK05691 1774 ALILRHETLRTTFPSVDGVPVQQVAEDSGLRMDWQDFSALPADARQQRLQQLADSEAHQPFDLERGPLLRACLVKAAERE 1853 (4334)
T ss_pred HHHHhCCcceEEEEccCCeEEEEECCCCCCCeeEeeccCCChHhHHHHHHHHHHHHHhcCCCCCCCceeEEEEEEeCCCc
Q ss_pred ceeeecCCcc-----------chhhhhhccccccccccccCCCCCcccccCCchhhhHHHHhhhhccccccchhhhhhcC
Q psy14338 834 HVALIFPPGI-----------DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNS 902 (1761)
Q Consensus 834 ~~~~~~~~~~-----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (1761)
+.+++..||+ +.+...|.....|..+ ...|....+.++..|+..
T Consensus 1854 ~~l~~~~HHii~DG~S~~ll~~el~~~Y~~~~~~~~~------------~~~~~~~~y~dy~~~~~~------------- 1908 (4334)
T PRK05691 1854 HYFVLTLHHIVTEGWAMDIFARELGALYEAFLDDRES------------PLEPLPVQYLDYSVWQRQ------------- 1908 (4334)
T ss_pred EEEEEecchhhhhhhhHHHHHHHHHHHHHHHhcCCCC------------CCCCCCCCHHHHHHHHHH-------------
Q ss_pred ccchhhhhhhhccchhhhHHHHHHhhhhhccCCCcccccCCCcccccccccccccCCCCCCCCCCCCCcccc-ccccccc
Q psy14338 903 KGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHA-THRQNDS 981 (1761)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 981 (1761)
.+......-....|. +.+.+.......+...+.+......+.. .......
T Consensus 1909 -----------~l~~~~~~~~~~yW~------------------~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~ 1959 (4334)
T PRK05691 1909 -----------WLESGERQRQLDYWK------------------AQLGNEHPLLELPADRPRPPVQSHRGELYRFDLSPE 1959 (4334)
T ss_pred -----------HhcChhhHHHHHHHH------------------HHhcCCCCcccCCCCCCCCcccCcCceEEEEECCHH
Q ss_pred chhhhcccccccccccccchhccccceeeecchhhhhhhccccccccchhhhHHHHhhhccccceeeecceEEEEEeccC
Q psy14338 982 GRQQICSSLIQPKCDQTSQVEKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDG 1061 (1761)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1061 (1761)
....+................... .....+-.....+-+...+........+..++.|.|++++++.++.
T Consensus 1960 ~~~~l~~~a~~~~vT~~~~l~aA~----------a~lL~r~sg~~dvv~G~~vsgR~~~~~~~~vG~fvntlPlrv~~~~ 2029 (4334)
T PRK05691 1960 LAARVRAFNAQRGLTLFMTMTATL----------AALLYRYSGQRDLRIGAPVANRIRPESEGLIGAFLNTQVLRCQLDG 2029 (4334)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHH----------HHHHHHhcCCCCeEEEecccCCCchhhhcceeeeeeeeeEEeecCC
Q ss_pred CcccccchhhhHHhhhhccceEEEeEEEeeCCCccccCCCchhhhhh---------------------------------
Q psy14338 1062 NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMH--------------------------------- 1108 (1761)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 1108 (1761)
...+...+............|...++..+.+....+........++.
T Consensus 2030 ~~t~~~ll~~v~~~~~~~~~hq~~p~~~iv~~l~~~r~~~~~plf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 2109 (4334)
T PRK05691 2030 QMSVSELLEQVRQTVIEGQSHQDLPFDHLVEALQPPRSAAYNPLFQVMCNVQRWEFQQSRQLAGMTVEYLVNDARATKFD 2109 (4334)
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHhccccccCCCCceEEEEEeeccccccccCCCCceeEeecccCCccccc
Q ss_pred -------------hhcccccCCCCcccc-------------cccCCCCCCccc-cccCChhhHHHHhhhccccCCCCccc
Q psy14338 1109 -------------LRDGFLADQLDPIYI-------------WVQSPHNASGYF-SLYGDESEYAQQFSARLVTGNTGELY 1161 (1761)
Q Consensus 1109 -------------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1761)
+...|..+.|+...+ +...+....+.+ .+...+...+..+.. +.......
T Consensus 2110 L~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~---~~~~~~~~ 2186 (4334)
T PRK05691 2110 LNLEVTDLDGRLGCCLTYSRDLFDEPRIARMAEHWQNLLEALLGDPQQRLAELPLLAAAEQQQLLDSLA---GEAGEARL 2186 (4334)
T ss_pred eEEEEEecCCcEEEEEEECcccCCHHHHHHHHHHHHHHHHHHHhhhcCChhhccCCcHHHHHHHHHHhC---CCCcCCCc
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++++.|.+++. ++|+++|++ ++++++||+||+++++++|++|++. |+++|++|+++++||+++++++
T Consensus 2187 ~~~l~~~~~~~a~-----~~p~~~Av~-----~~~~~lTY~eL~~~~~~lA~~L~~~-Gv~~g~~V~l~~~~s~~~vv~~ 2255 (4334)
T PRK05691 2187 DQTLHGLFAAQAA-----RTPQAPALT-----FAGQTLSYAELDARANRLARALRER-GVGPQVRVGLALERSLEMVVGL 2255 (4334)
T ss_pred ccchHHHHHHHHH-----HCCCCeEEE-----eCCeEEcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHHHH
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhh
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAA 1321 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1321 (1761)
|||+|+|++||||||.+|.+ |+.+++++++++++|++......+..... ....+................
T Consensus 2256 lailkaG~~~vpld~~~p~~------rl~~il~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 2325 (4334)
T PRK05691 2256 LAILKAGGAYVPLDPEYPLE------RLHYMIEDSGIGLLLSDRALFEALGELPA----GVARWCLEDDAAALAAYSDAP 2325 (4334)
T ss_pred HHHHHhCcEeecCCCCChHH------HHHHHHHhcCCCEEEeChhhhhhhccccc----cceeEEeccchhhhhcCCCCC
Q ss_pred ccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEE
Q psy14338 1322 LYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 1401 (1761)
Q Consensus 1322 ~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl 1401 (1761)
......++++|||+|||||||+||||+++|+++++.+.+....++++++|+++.+.++.|+.+. .++|.+|++|+++++
T Consensus 2326 ~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~i~~~L~~G~~lvl 2404 (4334)
T PRK05691 2326 LPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGMRADDCELHFYSINFDAAS-ERLLVPLLCGARVVL 2404 (4334)
T ss_pred CCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEE
Q ss_pred eCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHh
Q psy14338 1402 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFS 1481 (1761)
Q Consensus 1402 ~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~ 1481 (1761)
.++. .+++..+++.|++++||++.++|++++.|.+. ........+||.+++|||++++ .+.++|.+.++
T Consensus 2405 ~~~~--~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~--------~~~~~~~~~lr~i~~gGe~l~~-~~~~~~~~~~~ 2473 (4334)
T PRK05691 2405 RAQG--QWGAEEICQLIREQQVSILGFTPSYGSQLAQW--------LAGQGEQLPVRMCITGGEALTG-EHLQRIRQAFA 2473 (4334)
T ss_pred CCcc--cCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHh--------hhccccCCCceEEEEccccCCH-HHHHHHHHhCC
Q ss_pred hCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCC
Q psy14338 1482 ALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKG 1561 (1761)
Q Consensus 1482 ~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~ 1561 (1761)
. ..++|.||+||++..++........ +......+||+|++|+.++|+|++ ++
T Consensus 2474 ~-----~~l~n~YG~TE~~~~~~~~~~~~~~----------------------~~~~~~~~iG~pi~~~~~~i~d~~-~~ 2525 (4334)
T PRK05691 2474 P-----QLFFNAYGPTETVVMPLACLAPEQL----------------------EEGAASVPIGRVVGARVAYILDAD-LA 2525 (4334)
T ss_pred C-----ceEEeCcCCCcceEEEEEeeccccc----------------------ccCCCCCccccccCCCEEEEECCC-CC
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
+||.|++|||+|+|+++++||+| +|++|+++|+.+|+.. .++|||||||+|++ ++| |+
T Consensus 2526 ~vp~G~~GEL~i~G~~v~~GY~~---~~~~t~~~F~~~p~~~-~~~r~y~TGDl~~~------~~d--------G~---- 2583 (4334)
T PRK05691 2526 LVPQGATGELYVGGAGLAQGYHD---RPGLTAERFVADPFAA-DGGRLYRTGDLVRL------RAD--------GL---- 2583 (4334)
T ss_pred CCCCCCceEEEecccccCccccC---ChhhhhhhccCCCCCC-CCCceEeccceEEE------cCC--------CC----
Q ss_pred EEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEe----eCCeEEEEEEe-------CCCchhHhhHHHHHHHH
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFT----WTNLLVVVVEL-------DGNESEALDLVPLVTNA 1710 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~----~~~~~~a~v~~-------~~~~~~~~~l~~~l~~~ 1710 (1761)
++|+||+|+|||++|+||+|+|||+ +|.+||+|.+|+|++ .++.++++++. .......++++++++++
T Consensus 2584 l~~~GR~d~qvki~G~rIe~~EIE~-~l~~~p~V~~a~V~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~l~~~l~~~ 2662 (4334)
T PRK05691 2584 VEYVGRIDHQVKIRGFRIELGEIES-RLLEHPAVREAVVLALDTPSGKQLAGYLVSAVAGQDDEAQAALREALKAHLKQQ 2662 (4334)
T ss_pred EEEeecccCeEEeeeEEechHHHHH-HHHhCCCcceEEEEEeeCCCCcEEEEEEEecccccccccccccHHHHHHHHHhh
Q ss_pred HhhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1711 VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1711 ~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
|| .||+|+.|++++ +||+|+|||+||++|++
T Consensus 2663 -Lp-~ymvP~~~~~v~--~lP~t~~GKidr~~L~~ 2693 (4334)
T PRK05691 2663 -LP-DYMVPAHLILLD--SLPLTANGKLDRRALPA 2693 (4334)
T ss_pred -Cc-cccCChhheeec--ccCCCCCCcccHHhhcC
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-134 Score=1552.70 Aligned_cols=1477 Identities=16% Similarity=0.161 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHhccCCCCCCCcccccCcHHHHHHhcCCCCCCC-CCCCCCCcCCCCCCccccCCCcchhHHHHHHHHhh
Q psy14338 14 WKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNA-PKPEGGVMTPAPGESLVVPSGLPRNLEAAIQRYGS 92 (1761)
Q Consensus 14 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~a~ 92 (1761)
.++..+|++++..+...+..++.+.......+........+... +.+. ..+++++|+++++
T Consensus 2138 ~~l~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~l~~~~~~~a~ 2199 (4334)
T PRK05691 2138 ARMAEHWQNLLEALLGDPQQRLAELPLLAAAEQQQLLDSLAGEAGEARL------------------DQTLHGLFAAQAA 2199 (4334)
T ss_pred HHHHHHHHHHHHHHHhhhcCChhhccCCcHHHHHHHHHHhCCCCcCCCc------------------ccchHHHHHHHHH
Q ss_pred hcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCC
Q psy14338 93 ATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGI 172 (1761)
Q Consensus 93 ~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~ 172 (1761)
++|+++|+++++ +++||+||+++++++|++|+ +.|+++|++|+++++|| .++++++|||+|+|+
T Consensus 2200 ~~p~~~Av~~~~------~~lTY~eL~~~~~~lA~~L~--------~~Gv~~g~~V~l~~~~s--~~~vv~~lailkaG~ 2263 (4334)
T PRK05691 2200 RTPQAPALTFAG------QTLSYAELDARANRLARALR--------ERGVGPQVRVGLALERS--LEMVVGLLAILKAGG 2263 (4334)
T ss_pred HCCCCeEEEeCC------eEEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHHHHHHHHHHHhCc
Q ss_pred eEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCC
Q psy14338 173 VPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLT 252 (1761)
Q Consensus 173 ~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (1761)
+||||||.+|.+ |+.+++++++++++|++....+.+.............. ..................
T Consensus 2264 ~~vpld~~~p~~-----rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 2331 (4334)
T PRK05691 2264 AYVPLDPEYPLE-----RLHYMIEDSGIGLLLSDRALFEALGELPAGVARWCLED-------DAAALAAYSDAPLPFLSL 2331 (4334)
T ss_pred EeecCCCCChHH-----HHHHHHHhcCCCEEEeChhhhhhhccccccceeEEecc-------chhhhhcCCCCCCCCCCC
Q ss_pred CCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccc
Q psy14338 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALM 332 (1761)
Q Consensus 253 ~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~ 332 (1761)
|+++|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++||.++++ +|.+|+.|+|+|+.++.
T Consensus 2332 ~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-i~~~L~~G~~lvl~~~~-- 2408 (4334)
T PRK05691 2332 PQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGMRADDCELHFYSINFDAASER-LLVPLLCGARVVLRAQG-- 2408 (4334)
T ss_pred CCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHHH-HHHHHhCCCEEEECCcc--
Q ss_pred cCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcccc
Q psy14338 333 KVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICP 412 (1761)
Q Consensus 333 ~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n 412 (1761)
.+++..+.+.|+++++|++.++|+ ++..++... .......+||.+++| ||+++++++++|.+.++.. .++|
T Consensus 2409 ~~~~~~l~~~i~~~~vt~~~~tPs-~~~~l~~~~-~~~~~~~~lr~i~~g--Ge~l~~~~~~~~~~~~~~~-----~l~n 2479 (4334)
T PRK05691 2409 QWGAEEICQLIREQQVSILGFTPS-YGSQLAQWL-AGQGEQLPVRMCITG--GEALTGEHLQRIRQAFAPQ-----LFFN 2479 (4334)
T ss_pred cCCHHHHHHHHHHcCCeEEEcCHH-HHHHHHHhh-hccccCCCceEEEEc--cccCCHHHHHHHHHhCCCc-----eEEe
Q ss_pred ccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCc
Q psy14338 413 CASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492 (1761)
Q Consensus 413 ~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~ 492 (1761)
.|||||++++++... ............+||+|++|+.++|+|++++ +||.|++
T Consensus 2480 ~YG~TE~~~~~~~~~-------------------------~~~~~~~~~~~~~iG~pi~~~~~~i~d~~~~--~vp~G~~ 2532 (4334)
T PRK05691 2480 AYGPTETVVMPLACL-------------------------APEQLEEGAASVPIGRVVGARVAYILDADLA--LVPQGAT 2532 (4334)
T ss_pred CcCCCcceEEEEEee-------------------------cccccccCCCCCccccccCCCEEEEECCCCC--CCCCCCc
Q ss_pred eEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHH
Q psy14338 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDII 572 (1761)
Q Consensus 493 GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE 572 (1761)
|||||+|+++++||+|+|++|+++|+.+||...| +|||||||+|++++||+|+|+||+|+|||++|+||+|+|||
T Consensus 2533 GEL~i~G~~v~~GY~~~~~~t~~~F~~~p~~~~~-----~r~y~TGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~EIE 2607 (4334)
T PRK05691 2533 GELYVGGAGLAQGYHDRPGLTAERFVADPFAADG-----GRLYRTGDLVRLRADGLVEYVGRIDHQVKIRGFRIELGEIE 2607 (4334)
T ss_pred eEEEecccccCccccCChhhhhhhccCCCCCCCC-----CceEeccceEEEcCCCCEEEeecccCeEEeeeEEechHHHH
Q ss_pred HHHHhcCCccccccceEEEEEEecCCCceEEEEEEe--------CCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCC
Q psy14338 573 ATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQ--------RPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPP 644 (1761)
Q Consensus 573 ~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~--------~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~ 644 (1761)
++|.+++.| .+|+|++.+...++.+++|++. ......++++++|+++||.||+|+.+ +.+
T Consensus 2608 ~~l~~~p~V-----~~a~V~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~-------~~v 2675 (4334)
T PRK05691 2608 SRLLEHPAV-----REAVVLALDTPSGKQLAGYLVSAVAGQDDEAQAALREALKAHLKQQLPDYMVPAHL-------ILL 2675 (4334)
T ss_pred HHHHhCCCc-----ceEEEEEeeCCCCcEEEEEEEecccccccccccccHHHHHHHHHhhCccccCChhh-------eee
Q ss_pred CCccCCCCCcccHHHHHH--------HHHcCCCCcceeeecccccccCC------CCCccccCCCccccchhhhccccCC
Q psy14338 645 NYLPKTPLGGIHLSECKR--------RFLEGNLHPANVLLCPHTCVTNL------PKPREIHSGNCLAGQCKRRFLEGNL 710 (1761)
Q Consensus 645 ~~lP~t~~GKidR~~L~~--------~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1761)
++||+|+|||+||++|++ .+.....+.+..+...|..+++. ....+..|+|+...++.....+...
T Consensus 2676 ~~lP~t~~GKidr~~L~~~~~~~~~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~~~Ff~lGGdSl~a~~l~~~~~~~g~ 2755 (4334)
T PRK05691 2676 DSLPLTANGKLDRRALPAPDPELNRQAYQAPRSELEQQLAQIWREVLNVERVGLGDNFFELGGDSILSIQVVSRARQLGI 2755 (4334)
T ss_pred cccCCCCCCcccHHhhcCccccccccCcCCCCChHHHHHHHHHHHHhCCCccCCCcCHHhcCCchHHHHHHHHHHHHcCC
Q ss_pred CCcccccCCCccccCCCCCcccCC--------------------------------------------------------
Q psy14338 711 HPANVLLCPHTCVTNLPKPREIHS-------------------------------------------------------- 734 (1761)
Q Consensus 711 ~~~~~~l~~~~~~~~~~~~~~~~~-------------------------------------------------------- 734 (1761)
......++.+.++..+........
T Consensus 2756 ~l~~~~lf~~~ti~~la~~~~~~~~~~~~~~~~~~~~~l~p~q~~~~~~~~~~~~~~n~~~~l~~~~~~~~~~l~~a~~~ 2835 (4334)
T PRK05691 2756 HFSPRDLFQHQTVQTLAAVATHSEAAQAEQGPLQGASGLTPIQHWFFDSPVPQPQHWNQALLLEPRQALDPALLEQALQA 2835 (4334)
T ss_pred CCCHHHHhcCCCHHHHHHHHhhcccccccccccCCcCCCCHHHHHHHhccCCcccchheeeeeecCCCCCHHHHHHHHHH
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 735 -------------------------------------------------------------------------------- 734 (1761)
Q Consensus 735 -------------------------------------------------------------------------------- 734 (1761)
T Consensus 2836 l~~~h~~Lr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~~~~~~l~~~~ 2915 (4334)
T PRK05691 2836 LVEHHDALRLRFSQADGRWQAEYRAVTAQELLWQVTVADFAECAALFADAQRSLDLQQGPLLRALLVDGPQGQQRLLLAI 2915 (4334)
T ss_pred HHHhhHHHhccccccCCceeEEecccccccceeeccccCHHHHHHHHHHHhhCcCcccCceEEEEEEEcCCCCcEeeeee
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 735 -------------------------------------------------------------------------------- 734 (1761)
Q Consensus 735 -------------------------------------------------------------------------------- 734 (1761)
T Consensus 2916 hhl~~D~~S~~il~~dl~~~y~~~~~g~~~~l~~~~~~~~~w~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~ 2995 (4334)
T PRK05691 2916 HHLVVDGVSWRVLLEDLQALYRQLSAGAEPALPAKTSAFRDWAARLQAYAGSESLREELGWWQAQLGGPRAELPCDRPQG 2995 (4334)
T ss_pred hhhhhcccHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCHHHHHHHHHHhccChhHHHHHHHHHHHhcCCCCCCCcccccc
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 735 -------------------------------------------------------------------------------- 734 (1761)
Q Consensus 735 -------------------------------------------------------------------------------- 734 (1761)
T Consensus 2996 ~~~~~~~~~~~~~l~~~~t~~l~~~~~~~~~~~~~~~ll~al~~~l~~~~~~~~~~v~~e~hgr~~~~~~~d~~~tvgwf 3075 (4334)
T PRK05691 2996 GNLNRHAQTVSVRLDAERTRQLLQQAPAAYRTQVNDLLLTALARVLCRWSGQPSVLVQLEGHGREALFDDIDLTRSVGWF 3075 (4334)
T ss_pred ccccccccEEEEEeCHHHHHHHHHhhhHhhCCchHHHHHHHHHHHHHHhcCCCceEEecCCcCcccccccccccceecce
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 735 -------------------------------------------------------------------------------- 734 (1761)
Q Consensus 735 -------------------------------------------------------------------------------- 734 (1761)
T Consensus 3076 t~~~p~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fn~lg~~~~~~~~~~~~ 3155 (4334)
T PRK05691 3076 TSAYPLRLTPAPGDDAARGESIKAIKEQLRAVPHKGLGYGVLRYLADAAVREAMAALPQAPITFNYLGQFDQSFASDALF 3155 (4334)
T ss_pred eccceEEeeccccccccHHHHHHHHHHHHHhcCCCCCccceehhcccchhhhhhccCCCCcEEecccCcccccccccccc
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 735 -------------------------------------------------------------------------------- 734 (1761)
Q Consensus 735 -------------------------------------------------------------------------------- 734 (1761)
T Consensus 3156 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~L~~~~~~~~~~~~~~~i~~l~~~~~~~l~~~~~~~~~~~~~~~t~~d~~ 3235 (4334)
T PRK05691 3156 RPLDEPAGPAHDPDAPLPNELSVDGQVYGGELVLRWTYSAERYDEQTIAELAEAYLAELQALIAHCLADGAGGLTPSDFP 3235 (4334)
T ss_pred ccCccccccccCccCCcCceEEEEEEEeCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCccccC
Q ss_pred --------------------CCCcccccccceeccccccccccCCC--------CCCCccc-chhhhhHHHHHHHHHHhh
Q psy14338 735 --------------------DIGPASVMVGNIVQGNRLASAQGRDM--------GGPMEED-SDATRKHQFISEILKWRA 785 (1761)
Q Consensus 735 --------------------~~~~~s~~~~~~~~~~~l~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~l~~~~ 785 (1761)
++.|.|++|..+|.........+... +.++.+. ..........+++||+++
T Consensus 3236 l~~l~~~~l~~l~~~~~~iediyP~tp~Q~g~l~~~~~~~~~~~Y~~~~~~~l~~~ld~~~l~~Aw~~vv~rh~~LRT~f 3315 (4334)
T PRK05691 3236 LAQLTQAQLDALPVPAAEIEDVYPLTPMQEGLLLHTLLEPGTGLYYMQDRYRINSALDPERFAQAWQAVVARHEALRASF 3315 (4334)
T ss_pred cccCCHHHHHhhhcccccccccccCCHHHHhhhhhhccCCCCcccceeeEEEEcCCCCHHHHHHHHHHHHHHhHHhheEe
Q ss_pred hccCCceEEEEecCcccccc------ccchhHHhHHHHHHHHHHhhh--------------hhcccCCceeeecCCcc--
Q psy14338 786 ASTSEHVIFTLLNSKGSAAQ------LLTCSQLHKRAERVGALLLER--------------AKINTGDHVALIFPPGI-- 843 (1761)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~-- 843 (1761)
.........+++........ .............+......+ .+...+.+.+++..||+
T Consensus 3316 ~~~~~~~~~Qvv~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~ 3395 (4334)
T PRK05691 3316 SWNAGETMLQVIHKPGRTPIDYLDWRGLPEDGQEQRLQALHKQEREAGFDLLNQPPFHLRLIRVDEARYWFMMSNHHILI 3395 (4334)
T ss_pred eecCCCCcEEEEccCCCCceeEeecccCChhhhHHHHHHHHHHHHhCCCCcCCCCcEEEEEEEecCcEEEEEEEehhhhh
Q ss_pred ---------chhhhhhccccccccccccCCCCCcccccCCchhhhHHHHhhhhccccccchhhhhhcCccchhhhhhhhc
Q psy14338 844 ---------DLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQ 914 (1761)
Q Consensus 844 ---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1761)
+.+...|.....|..+ .+|....+.++..|.
T Consensus 3396 DGwS~~ll~~dl~~~Y~~~~~g~~~-------------~~~~~~~y~dyi~~l--------------------------- 3435 (4334)
T PRK05691 3396 DAWCRSLLMNDFFEIYTALGEGREA-------------QLPVPPRYRDYIGWL--------------------------- 3435 (4334)
T ss_pred ccccHHHHHHHHHHHHHHhhCCCCC-------------CCCCCCChHHHHHHH---------------------------
Q ss_pred cchhhhHHHHHHhhhhhccCCCcccccCCCcccccccccccccCCCCCCCCCCCCCc------ccccccccccchhhhcc
Q psy14338 915 LHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESS------NHATHRQNDSGRQQICS 988 (1761)
Q Consensus 915 ~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 988 (1761)
...........|+ +.|.++......+...|........ .....+........+..
T Consensus 3436 -~~~~~~~~~~yW~------------------~~L~g~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~ 3496 (4334)
T PRK05691 3436 -QRQDLAQARQWWQ------------------DNLRGFERPTPIPSDRPFLREHAGDSGGMVVGDCYTRLDAADGARLRE 3496 (4334)
T ss_pred -HhCcHHHHHHHHH------------------HHhcCCCccccCCcCCcccccccccccccccceeEEecCHHHHHHHHH
Q ss_pred cccccccccccchhcc-----------ccceeeecchhhhhhhccccccccchhhhHHHHhhhccccceeeecceEEEEE
Q psy14338 989 SLIQPKCDQTSQVEKL-----------HDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVV 1057 (1761)
Q Consensus 989 ~~~~~~~~~~~~~~~l-----------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1057 (1761)
...+..+..+...... .|.+|-.-.......+.++ +..++.|.|++++++
T Consensus 3497 ~~~~~~vT~~~vl~aawalvL~~ytg~~dVvfG~~~sGR~~~~~gi-------------------e~~vG~fiNtlp~Rv 3557 (4334)
T PRK05691 3497 LAQAHQLTVNTFAQAAWALVLRRYSGDRDVLFGVTVAGRPVSMPQM-------------------QRTVGLFINSIALRV 3557 (4334)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHhcCCCceEEEeccCCCCCCcccH-------------------HhHhcccccccceEE
Q ss_pred eccCCc--ccccchhhhHHhhhhc-------------------cceEEEeEEEeeCCCccccCCCch-------------
Q psy14338 1058 ELDGNE--SEALDLVPLVTNAVLE-------------------EHHLIVGVAVVVDPGVVPINSRGE------------- 1103 (1761)
Q Consensus 1058 ~~~~~~--~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~------------- 1103 (1761)
.++... ....++.........+ .....+...+.++...........
T Consensus 3558 ~~~~~~~~~t~~~~L~~v~~~~~~~~~~q~~~l~~i~~~~~~~~~~~LF~t~~v~~n~~~~~~~~~~~~~~~~~~~~~~~ 3637 (4334)
T PRK05691 3558 QLPAAGQRCSVRQWLQGLLDSNMELREYEYLPLVAIQECSELPKGQPLFDSLFVFENAPVEVSVLDRAQSLNASSDSGRT 3637 (4334)
T ss_pred eeCCccCCCcHHHHHHHHHHHHHHHhhccCCCHHHHHHHhcCCCCCCCccEEEEeecCCcchhhhccccccccccccccc
Q ss_pred ------------hhhhhhhcccccCCCCcccc-------------cccCCCCCCccccccCChhhHHHHhhhccccCCCC
Q psy14338 1104 ------------KQRMHLRDGFLADQLDPIYI-------------WVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTG 1158 (1761)
Q Consensus 1104 ------------~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1158 (1761)
.....+...|..+.++...+ ....+....+.+.+...+. ..+......+....
T Consensus 3638 ~~~~~l~~~~~~~~~l~~~l~y~~~~~~~~~~~~l~~~f~~~L~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 3715 (4334)
T PRK05691 3638 HTNFPLTAVCYPGDDLGLHLSYDQRYFDAPTVERLLGEFKRLLLALVQGFHGDLSELPLLGEQE--RDFLLDGCNRSERD 3715 (4334)
T ss_pred ccCCCeEEEEecCCceEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhCcCCChhhcCCCCHHH--HHHHHHhhCCccCC
Q ss_pred cccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHH
Q psy14338 1159 ELYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLI 1238 (1761)
Q Consensus 1159 ~~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~i 1238 (1761)
.....++|+.|.++++ ++||++||+ ++++++||+||+++++++|++|.+. |+++|++|+|++++|++++
T Consensus 3716 ~~~~~~~~~~~~~~~~-----~~p~~~Av~-----~~~~~~tY~eL~~~~~~la~~L~~~-gv~~~~~V~v~~~~s~~~~ 3784 (4334)
T PRK05691 3716 YPLEQSYVRLFEAQVA-----AHPQRIAAS-----CLDQQWSYAELNRAANRLGHALRAA-GVGVDQPVALLAERGLDLL 3784 (4334)
T ss_pred CccccCHHHHHHHHHH-----hCCCceEEE-----cCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHH
Q ss_pred HHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccch
Q psy14338 1239 CAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318 (1761)
Q Consensus 1239 va~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1318 (1761)
+++|||+|+|++||||||.+|.+ |+.+|+++++++++|++..................................
T Consensus 3785 v~~lavlkaG~a~vpld~~~p~~------r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3858 (4334)
T PRK05691 3785 GMIVGSFKAGAGYLPLDPGLPAQ------RLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEVQAGEVA 3858 (4334)
T ss_pred HHHHHHHhhCcEEeCCCCCChHH------HHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeeccccccccc
Q ss_pred hhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCce
Q psy14338 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHH 1398 (1761)
Q Consensus 1319 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~ 1398 (1761)
...+.....|+++|||+|||||||+||||+++|+++++.+.+....++++++|++++..++.|+.+. +++|.+|+.|++
T Consensus 3859 ~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~-~~~~~~l~~G~~ 3937 (4334)
T PRK05691 3859 SHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISV-WQFLAAPLFGAR 3937 (4334)
T ss_pred ccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHH-HHHHHHHhCCCE
Q ss_pred EEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHH
Q psy14338 1399 SILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSK 1478 (1761)
Q Consensus 1399 ~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~ 1478 (1761)
++++++.. ..++..+++.+++++||++.+||++++.+++. ....+++||.+++|||++++ .+.++|.+
T Consensus 3938 l~i~~~~~-~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~----------~~~~~~~lr~~~~gGe~l~~-~~~~~~~~ 4005 (4334)
T PRK05691 3938 VEIVPNAI-AHDPQGLLAHVQAQGITVLESVPSLIQGMLAE----------DRQALDGLRWMLPTGEAMPP-ELARQWLQ 4005 (4334)
T ss_pred EEEcCccc-cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhh----------ccccCCCceEEEecCCcCCH-HHHHHHHH
Q ss_pred HHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCC
Q psy14338 1479 LFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPE 1558 (1761)
Q Consensus 1479 ~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~ 1558 (1761)
.++. ..++|.||+|||+..++....... .......+||+|++|++++|+|.+
T Consensus 4006 ~~~~-----~~l~n~YG~TE~t~~~~~~~~~~~-----------------------~~~~~~~~iG~p~~~~~~~v~d~~ 4057 (4334)
T PRK05691 4006 RYPQ-----IGLVNAYGPAECSDDVAFFRVDLA-----------------------STRGSYLPIGSPTDNNRLYLLDEA 4057 (4334)
T ss_pred hCCC-----CeEEeCccCccceeEEEEEEcccc-----------------------cccCCcCCCCCccCCCEEEEECCC
Q ss_pred CCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcc
Q psy14338 1559 TKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKL 1638 (1761)
Q Consensus 1559 ~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~ 1638 (1761)
++++|.|++|||||+|+++++||+| +|++|+++|+++|+.. +++|||||||+||| ++| |+
T Consensus 4058 -~~~~p~g~~GEL~i~G~~v~~GY~~---~~~~t~~~f~~~p~~~-~~~~~yrTGDl~~~------~~d--------G~- 4117 (4334)
T PRK05691 4058 -LELVPLGAVGELCVAGTGVGRGYVG---DPLRTALAFVPHPFGA-PGERLYRTGDLARR------RSD--------GV- 4117 (4334)
T ss_pred -CCCCCCCCceEEEEecccccccccC---CcccchhhcccCCCCC-CCceeeccCcceee------cCC--------Cc-
Q ss_pred cceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEe----eCCeEEEEEEeCCCchhH----hhHHHHHHHH
Q psy14338 1639 HDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFT----WTNLLVVVVELDGNESEA----LDLVPLVTNA 1710 (1761)
Q Consensus 1639 ~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~----~~~~~~a~v~~~~~~~~~----~~l~~~l~~~ 1710 (1761)
|+|+||+|+|||+||+||||+|||+ +|.++|+|.+|+|+. .++.+++|++........ ++++++|+++
T Consensus 4118 ---l~~~GR~d~qvki~G~riel~eIE~-~l~~~~~v~~a~v~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~ 4193 (4334)
T PRK05691 4118 ---LEYVGRIDHQVKIRGYRIELGEIEA-RLHEQAEVREAAVAVQEGVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAE 4193 (4334)
T ss_pred ---EEEecccCCcEEeceEEecHHHHHH-HHHhCCCccEEEEEEecCCCCcEEEEEEeCCcccccchHHHHHHHHHHHhh
Q ss_pred HhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCChhhhh
Q psy14338 1711 VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPIYVA 1758 (1761)
Q Consensus 1711 ~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~~~~~~ 1758 (1761)
|| .||+|+.|++++ +||+|+||||||++|++...+..-...|.+
T Consensus 4194 -Lp-~ymvP~~~~~~~--~lP~t~~GKidr~~L~~~~~~~~~~~~~~~ 4237 (4334)
T PRK05691 4194 -LP-DYMVPLHWLWLD--RLPLNANGKLDRKALPALDIGQLQSQAYLA 4237 (4334)
T ss_pred -CC-hhhcCcceeecc--cCCCCCCCcccHhhcCCCccccccccccCC
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-133 Score=1552.30 Aligned_cols=1450 Identities=16% Similarity=0.176 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHhccCCCCCCCcccccCcHHHHHHhcCCC-CCCCCCCCCCCcCCCCCCccccCCCcchhHHHHHHHHhh
Q psy14338 14 WKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPK-DPNAPKPEGGVMTPAPGESLVVPSGLPRNLEAAIQRYGS 92 (1761)
Q Consensus 14 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~a~ 92 (1761)
.++..+|++++..+...+..++.+.......+.......+ .+....+. ..+++++|+++++
T Consensus 461 ~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~a~ 522 (5163)
T PRK12316 461 ERMARHWQNLLRGMVENPQARVDELPMLDAEERGQLVEGWNATAAEYPL------------------QRGVHRLFEEQVE 522 (5163)
T ss_pred HHHHHHHHHHHHHHHhccccccccCCCCCHHHHHHHHHHhcCccccCCC------------------CCCHHHHHHHHHH
Q ss_pred hcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCC
Q psy14338 93 ATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGI 172 (1761)
Q Consensus 93 ~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~ 172 (1761)
++|+++|+++++ +++||+||+++++++|+.|+ +.|+++|++|+|+++|| +++++++|||+|+|+
T Consensus 523 ~~p~~~A~~~~~------~~~TY~eL~~~~~~lA~~L~--------~~gv~~g~~V~l~~~~s--~~~i~~~la~~~aG~ 586 (5163)
T PRK12316 523 RTPEAPALAFGE------ETLDYAELNRRANRLAHALI--------ERGVGPDVLVGVAMERS--IEMVVALLAILKAGG 586 (5163)
T ss_pred HCCCCeEEEeCC------ceEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHHHHHHHHHHHcCC
Q ss_pred eEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCC
Q psy14338 173 VPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLT 252 (1761)
Q Consensus 173 ~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (1761)
+||||||.+|.+ |+.+++++++++++|++......+.......++..+. ............+.....
T Consensus 587 ~~vpld~~~p~~-----rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 653 (5163)
T PRK12316 587 AYVPLDPEYPAE-----RLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDR--------PAAWLEGYSEENPGTELN 653 (5163)
T ss_pred EEeccCccCcHH-----HHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecC--------cchhhccCCCCCCCCCCC
Q ss_pred CCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccc
Q psy14338 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALM 332 (1761)
Q Consensus 253 ~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~ 332 (1761)
|+++|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++||+++++ +|.+|++|+|+|+++++.
T Consensus 654 ~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~-~~~~L~~G~~l~i~~~~~- 731 (5163)
T PRK12316 654 PENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWE-FFWPLMSGARLVVAAPGD- 731 (5163)
T ss_pred CCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHH-HHHHHhCCCEEEECCccc-
Q ss_pred cCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcccc
Q psy14338 333 KVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICP 412 (1761)
Q Consensus 333 ~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n 412 (1761)
.+++..+++.|++++||++.+||+ ++..++...... ++++||.+++| ||+++++++++|.+.++.. +++|
T Consensus 732 ~~~~~~~~~~i~~~~vt~~~~~Ps-~~~~l~~~~~~~--~~~~l~~~~~g--Ge~l~~~~~~~~~~~~~~~-----~l~n 801 (5163)
T PRK12316 732 HRDPAKLVELINREGVDTLHFVPS-MLQAFLQDEDVA--SCTSLRRIVCS--GEALPADAQEQVFAKLPQA-----GLYN 801 (5163)
T ss_pred cCCHHHHHHHHHHcCCeEEEeCHH-HHHHHHhccccc--cCCCccEEEEe--eccCCHHHHHHHHHhCCCC-----eEEe
Q ss_pred ccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCc
Q psy14338 413 CASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492 (1761)
Q Consensus 413 ~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~ 492 (1761)
.||||||++.++... .........+||+|++|++++|+|++++ ++|.|++
T Consensus 802 ~YG~TE~~~~~~~~~----------------------------~~~~~~~~~~iG~p~~~~~~~i~d~~~~--~~p~G~~ 851 (5163)
T PRK12316 802 LYGPTEAAIDVTHWT----------------------------CVEEGGDSVPIGRPIANLACYILDANLE--PVPVGVL 851 (5163)
T ss_pred CcCcChheeeeeEEe----------------------------cccccCCCCCCccccCCCEEEEECCCCC--CCCCCCc
Q ss_pred eEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHH
Q psy14338 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDII 572 (1761)
Q Consensus 493 GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE 572 (1761)
|||||+|+++++||+|+|++|+++|+.+||..+ +|||||||+|++++||+|+|+||+|+|||++|+||+|+|||
T Consensus 852 GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~------~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE 925 (5163)
T PRK12316 852 GELYLAGRGLARGYHGRPGLTAERFVPSPFVAG------ERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIE 925 (5163)
T ss_pred eEEEecccccChhhCCChhhhhhhCCCCCCCCC------CeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHH
Q ss_pred HHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCC--CCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCC
Q psy14338 573 ATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRP--DCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKT 650 (1761)
Q Consensus 573 ~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~--~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t 650 (1761)
++|.+++.| .+|+|++.+ ++.++|||++.+ ....++++++++++||.||+|+.| +.+++||+|
T Consensus 926 ~~l~~~p~V-----~~a~V~~~~---~~~lva~vv~~~~~~~~~~~l~~~l~~~Lp~y~vP~~i-------~~v~~lP~t 990 (5163)
T PRK12316 926 ARLLEHPWV-----REAAVLAVD---GKQLVGYVVLESEGGDWREALKAHLAASLPEYMVPAQW-------LALERLPLT 990 (5163)
T ss_pred HHHHhCCCc-----ceEEEEEcC---CCeEEEEEEccCCCCCCHHHHHHHHHhhCCCccCCCeE-------EEHhhCCCC
Q ss_pred CCCcccHHHHHHH--------HHcCCCCcceeeecccccccCC------CCCccccCCCccccchhhhccccCCCCcccc
Q psy14338 651 PLGGIHLSECKRR--------FLEGNLHPANVLLCPHTCVTNL------PKPREIHSGNCLAGQCKRRFLEGNLHPANVL 716 (1761)
Q Consensus 651 ~~GKidR~~L~~~--------~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1761)
+|||+||++|++. +.....+.+..+...|..++++ ....+..|+|+.+.++.....+.+.......
T Consensus 991 ~~GKidr~~L~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vL~~~~i~~~~~Ff~lGgdSl~a~~l~~~~~~~g~~l~~~~ 1070 (5163)
T PRK12316 991 PNGKLDRKALPAPEASVAQQGYVAPRNALERTLAAIWQDVLGVERVGLDDNFFELGGDSIVSIQVVSRARQAGIQLSPRD 1070 (5163)
T ss_pred CCCChhHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhCCCCCCCCCChhhcCCcHHHHHHHHHHHHHhCCCCCHHH
Q ss_pred cCCCccccCC----------------------------------------------------------------------
Q psy14338 717 LCPHTCVTNL---------------------------------------------------------------------- 726 (1761)
Q Consensus 717 l~~~~~~~~~---------------------------------------------------------------------- 726 (1761)
++.+.++..+
T Consensus 1071 ~~~~~ti~~la~~~~~~~~~~~~~~~~~~~~~lsp~q~~~~~~~~~~~~~~n~~~~l~~~~~l~~~~l~~al~~lv~rH~ 1150 (5163)
T PRK12316 1071 LFQHQTIRSLALVAKAGQATAADQGPASGEVALAPVQRWFFEQAIPQRQHWNQSLLLQARQPLDPDRLGRALERLVAHHD 1150 (5163)
T ss_pred HhcCCCHHHHHHHHHhccccccccccccCCCCCCHHHHHHHhccCCccccceeeeeeeccCCCCHHHHHHHHHHHHHhhh
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 727 -------------------------------------------------------------------------------- 726 (1761)
Q Consensus 727 -------------------------------------------------------------------------------- 726 (1761)
T Consensus 1151 ~LR~~f~~~~g~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~gpl~~~~l~~~~~~~~~L~l~~HHlivD 1230 (5163)
T PRK12316 1151 ALRLRFREEDGGWQQAYAAPQAGEVLWQRQAASEEELLALCEEAQRSLDLEQGPLLRALLVDMADGSQRLLLVIHHLVVD 1230 (5163)
T ss_pred HHhhcccccCcceeeeeccccccchhhhcccccHHHHHHHHHHHhhcCCcccCceEEEEEEEcCCCCeeEEEEEeeeeec
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 727 -------------------------------------------------------------------------------- 726 (1761)
Q Consensus 727 -------------------------------------------------------------------------------- 726 (1761)
T Consensus 1231 g~Sw~Ill~dL~~~y~~~~~~l~~~~~~~~~w~~~~~~~~~~~~~~~~yW~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 1310 (5163)
T PRK12316 1231 GVSWRILLEDLQRAYADLDADLPARTSSYQAWARRLHEHAGARAEELDYWQAQLEDAPHELPCENPDGALENRHERKLEL 1310 (5163)
T ss_pred cchHHHHHHHHHHHHHhhccccCCCccCHHHHHHHHHHhcccchhhHHHHHHhhcCCCccCCCCcccccccccccceEEE
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 727 -------------------------------------------------------------------------------- 726 (1761)
Q Consensus 727 -------------------------------------------------------------------------------- 726 (1761)
T Consensus 1311 ~l~~~~t~~Ll~~a~~~~~~~~~~vllaA~~~~l~~~~~~~~~~v~~e~hGR~~~~~~~d~~~tvGwFt~~~Pl~~~~~~ 1390 (5163)
T PRK12316 1311 RLDAERTRQLLQEAPAAYRTQVNDLLLTALARVTCRWSGQASVLVQLEGHGREDLFEDIDLSRTVGWFTSLFPVRLTPAA 1390 (5163)
T ss_pred ECCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHcCCCceEEecccccccccccCcccccccccccccceeeccCCc
Q ss_pred --------------------------------------------------------------------------------
Q psy14338 727 -------------------------------------------------------------------------------- 726 (1761)
Q Consensus 727 -------------------------------------------------------------------------------- 726 (1761)
T Consensus 1391 ~~~~~l~~vk~~l~~~~~~g~~y~~~~~~~~~~~~~~l~~~~~~~i~fnylg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1470 (5163)
T PRK12316 1391 DLGESIKAIKEQLRAVPDKGIGYGLLRYLAGEEAAARLAALPQPRITFNYLGQFDRQFDEAALFVPATESAGAAQDPCAP 1470 (5163)
T ss_pred chHHHHHHHHHHHhhcCCCCcchHHHhhhccchhhhhhhccCCcceeecccccccccccccccccccccccccccCCccc
Q ss_pred ----------------------------------------------------------------------------CCCc
Q psy14338 727 ----------------------------------------------------------------------------PKPR 730 (1761)
Q Consensus 727 ----------------------------------------------------------------------------~~~~ 730 (1761)
+...
T Consensus 1471 ~~~~l~v~~~~~~g~l~~~~~y~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~pl~~~~~~~~~~~~~~~ 1550 (5163)
T PRK12316 1471 LANWLSIEGQVYGGELSLHWSFSREMFAEATVQRLADDYARELQALIEHCCDERNRGVTPSDFPLAGLSQAQLDALPLPA 1550 (5163)
T ss_pred ccceeeeeeEEEcceEEEEEEEchhhcCHHHHHHHHHHHHHHHHHHHHHHhccccccCCcccccccccchhhhhcccccc
Q ss_pred ccCCCCCcccccccceeccccccccccCCCCCCCccc--------chhhhhHHHHHHHHHHhhhccCC--ceEEEEecCc
Q psy14338 731 EIHSDIGPASVMVGNIVQGNRLASAQGRDMGGPMEED--------SDATRKHQFISEILKWRAASTSE--HVIFTLLNSK 800 (1761)
Q Consensus 731 ~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~ 800 (1761)
....++.|.|++|+++|.........+........+- ......+...+++||+++..... .....+....
T Consensus 1551 ~~i~~~~p~s~~Q~~l~~~~~~~~~~~~y~~~~~~~~~~~d~~~l~~A~~~~v~rh~~LRT~f~~~~~~~~~~q~v~~~~ 1630 (5163)
T PRK12316 1551 GEIADIYPLSPMQQGMLFHSLYEQEAGDYINQLRVDVQGLDPDRFRAAWQATVDRHEILRSGFLWQDGLEQPLQVIHKQV 1630 (5163)
T ss_pred ccccccccCCHHHHHHHHHHhhCCCCCcceeeeEEEecCcCHHHHHHHHHHHHHHHHHhheEEEecCCCCceeEEEecCC
Q ss_pred cccccccchhHHhHHHHHHHHHHhhhh-----------------hcccCCceeeecCCcc-------chhhhhhcccccc
Q psy14338 801 GSAAQLLTCSQLHKRAERVGALLLERA-----------------KINTGDHVALIFPPGI-------DLICAFYGCLYVG 856 (1761)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~-------~~l~~~~~~~~~~ 856 (1761)
......+.+.........+........ +...+.+.+++..||+ ..+.......|.|
T Consensus 1631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~l~~~pl~r~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~Y~~ 1710 (5163)
T PRK12316 1631 ELPFAELDWRGREDLGQALDALAQAERQKGFDLTRAPLLRLVLVRTGEGRHHLIYTNHHILMDGWSNAQLLGEVLQRYAG 1710 (5163)
T ss_pred CCceeEecCCCchhHHHHHHHHHHHHhhCCCCCCCCCcEEEEEEEECCCeEEEEEEecceeeccccHHHHHHHHHHHhcC
Q ss_pred ccccccCCCCCcccccCCchhhhHHHHhhhhccccccchhhhhhcCccchhhhhhhhccchhhhHHHHHHhhhhhccCCC
Q psy14338 857 AVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGD 936 (1761)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 936 (1761)
..+.+..+ .+.++..|. ..........+|.
T Consensus 1711 ~~~~~~~~--------------~y~~y~~~~----------------------------~~~~~~~~~~yW~-------- 1740 (5163)
T PRK12316 1711 QPVAAPGG--------------RYRDYIAWL----------------------------QRQDAAASEAFWK-------- 1740 (5163)
T ss_pred CCCCCCCc--------------ChHHHHHHH----------------------------hcchHHHHHHHHH--------
Q ss_pred cccccCCCcccccccccccccCCCCCCCCCCCCCcccccccccccchhhhcccccccccccccchhcc-----------c
Q psy14338 937 HVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTSQVEKL-----------H 1005 (1761)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~ 1005 (1761)
+.|.+.......+...+.+....................+.....+............ .
T Consensus 1741 ----------~~L~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~t~~~~l~~awa~~L~~~tg~~ 1810 (5163)
T PRK12316 1741 ----------EQLAALEEPTRLAQAARTEDGQVGYGDHQQLLDPAQTRALAEFARAQKVTLNTLVQAAWLLLLQRYTGQE 1810 (5163)
T ss_pred ----------HHhcCCCCCcCCCCCCCccccccccceEEEeCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHcCCC
Q ss_pred cceeeecchhhhhhhccccccccchhhhHHHHhhhccccceeeecceEEEEEeccCCcccccchhhhHHhhhhccceE--
Q psy14338 1006 DAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHL-- 1083 (1761)
Q Consensus 1006 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1083 (1761)
|.+|-...........+. +..++.+.|+++++++++...++...+............++
T Consensus 1811 dv~~G~~~sgR~~~~~~~-------------------~~~vG~fintlp~r~~~~~~~t~~~~l~~v~~~~~~~~~~~~~ 1871 (5163)
T PRK12316 1811 TVAFGATVAGRPAELPGI-------------------EQQIGLFINTLPVIAAPRPDQSVADWLQEVQALNLALREHEHT 1871 (5163)
T ss_pred CEEEEeeecCCCCCccch-------------------hhhceeeeeeeeEEEEeCCCCCHHHHHHHHHHHHHHHHhccCC
Q ss_pred ---------------EEeEEEeeCCCccccCCCc--------------------------hhhhhhhhcccccCCCCccc
Q psy14338 1084 ---------------IVGVAVVVDPGVVPINSRG--------------------------EKQRMHLRDGFLADQLDPIY 1122 (1761)
Q Consensus 1084 ---------------~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~ 1122 (1761)
.+...+.++.......... ..+...+...|..+.|+...
T Consensus 1872 ~~~~i~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~y~~~~~~~~~ 1951 (5163)
T PRK12316 1872 PLYDIQRWAGQGGEALFDSLLVFENYPVAEALKQGAPAGLVFGRVSNHEQTNYPLTLAVTLGETLSLQYSYDRGHFDAAA 1951 (5163)
T ss_pred CHHHHHHHhcCCCCCcEeeeeeeccCcchhhhhccccCCceecccccccccCCCeEEEEecCCcEEEEEecChhhCCHHH
Q ss_pred c-------------cccCCCCCCccccccCChhhHHHHhhhccccCCCCccccc-ccccccccccCCCCcCCCCCCCceE
Q psy14338 1123 I-------------WVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYAR-TGYLGFLRRTSPAGVAGAPVPPGVS 1188 (1761)
Q Consensus 1123 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~P~~~Av~ 1188 (1761)
+ ....+....+.+.+...+....... .||.+..+.... ++|+.|.+++. ++|+++|++
T Consensus 1952 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~a~-----~~p~~~A~~ 2023 (5163)
T PRK12316 1952 IERLDRHLLHLLEQMAEDAQAALGELALLDAGERQRILA---DWDRTPEAYPRGPGVHQRIAEQAA-----RAPEAIAVV 2023 (5163)
T ss_pred HHHHHHHHHHHHHHHHhCcccccccccCCCHHHHHHHHH---hcCCCCCCCCCCCCHHHHHHHHHH-----hCCCCeEEE
Q ss_pred EccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHH
Q psy14338 1189 SVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPT 1268 (1761)
Q Consensus 1189 ~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~r 1268 (1761)
++++++||+||+++++++|++|++. |+++|++|+|+++||+++++++|||+|+|++||||||.+|.+ |
T Consensus 2024 -----~~~~~lTy~eL~~~a~~lA~~L~~~-gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vpld~~~p~~------r 2091 (5163)
T PRK12316 2024 -----FGDQHLSYAELDSRANRLAHRLRAR-GVGPEVRVAIAAERSFELVVALLAVLKAGGAYVPLDPNYPAE------R 2091 (5163)
T ss_pred -----cCCCeEcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEeecCCCCCHH------H
Q ss_pred HHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEE
Q psy14338 1269 VRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIK 1348 (1761)
Q Consensus 1269 l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~ 1348 (1761)
+.+++++++++++|++......+........+..... ..........+.....++++|||+|||||||+||||+
T Consensus 2092 l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~ 2165 (5163)
T PRK12316 2092 LAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRD------AEWADYPDTAPAVQLAGENLAYVIYTSGSTGLPKGVA 2165 (5163)
T ss_pred HHHHHHhcCCCEEEeChhhhhhcccccccceEeccch------hhhhccCccCCCCCCCCCCeEEEEeCccCCCCCCEeE
Q ss_pred ccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeec
Q psy14338 1349 MSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFC 1428 (1761)
Q Consensus 1349 ~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~ 1428 (1761)
++|+++++.+.+....++++++|+++.+++++|+.+. +++|.+|++|+++++.++. .+++..+++.|++++||++++
T Consensus 2166 ~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~~~~~~~~--~~~~~~~~~~i~~~~vt~~~~ 2242 (5163)
T PRK12316 2166 VSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAH-EQWFHPLLNGARVLIRDDE--LWDPEQLYDEMERHGVTILDF 2242 (5163)
T ss_pred EccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHH-HHHHHHHhCCCEEEeCCcc--cCCHHHHHHHHHHcCCeEEEc
Q ss_pred chHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCC
Q psy14338 1429 SYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGAS 1508 (1761)
Q Consensus 1429 ~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~ 1508 (1761)
+|++++.+.+. .......++||.+++|||++++ .+.++|.+.++. ..++|.||+||++..++....
T Consensus 2243 ~P~~~~~l~~~--------~~~~~~~~~lr~~~~gGe~l~~-~~~~~~~~~~~~-----~~l~n~YG~TE~~~~~~~~~~ 2308 (5163)
T PRK12316 2243 PPVYLQQLAEH--------AERDGRPPAVRVYCFGGEAVPA-ASLRLAWEALRP-----VYLFNGYGPTEAVVTPLLWKC 2308 (5163)
T ss_pred ChHHHHHHHhh--------hhcccCCcceeEEEEecccCCH-HHHHHHHHhCCC-----cEEEECccchhheeeeeeeec
Q ss_pred CCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCC
Q psy14338 1509 SPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGD 1588 (1761)
Q Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~ 1588 (1761)
.... +......+||+|++|++++|+|++ +++||.|++|||||+|+++++|||| +
T Consensus 2309 ~~~~----------------------~~~~~~~~iG~p~~~~~~~i~d~~-~~~vp~g~~GEl~i~G~~v~~GY~~---~ 2362 (5163)
T PRK12316 2309 RPQD----------------------PCGAAYVPIGRALGNRRAYILDAD-LNLLAPGMAGELYLGGEGLARGYLN---R 2362 (5163)
T ss_pred cccc----------------------ccCCCcCCcccccCCCEEEEECCC-CCCCCCCCeeEEEecchhhcccccC---C
Q ss_pred hhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHH
Q psy14338 1589 ESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSV 1668 (1761)
Q Consensus 1589 p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~ 1668 (1761)
|++|+++|+.+|+.+ .++|||||||+||+ ++| |+ |+|+||+|||||++|+||||+|||+ +
T Consensus 2363 p~~T~~~f~~~~~~~-~~~~~yrTGDl~~~------~~d--------G~----l~~~GR~d~~iki~G~rie~~eIE~-~ 2422 (5163)
T PRK12316 2363 PGLTAERFVPDPFSA-SGERLYRTGDLARY------RAD--------GV----VEYLGRIDHQVKIRGFRIELGEIEA-R 2422 (5163)
T ss_pred hhhhhhhccCCCCCC-CCCeeEecccEEEE------cCC--------Cc----EEEecCCCCeEEEcCccCChHHHHH-H
Q ss_pred HHhccCcceeEEEe----eCCeEEEEEEe-CCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHH
Q psy14338 1669 MRAHKKIAECAVFT----WTNLLVVVVEL-DGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHL 1743 (1761)
Q Consensus 1669 l~~~p~V~~a~Vv~----~~~~~~a~v~~-~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L 1743 (1761)
|.+||+|.+|+|++ .++.+++||+. .+...+.++++++++++ || .||+|+.|++++ +||+|+||||||++|
T Consensus 2423 l~~~~~v~~a~v~~~~~~~~~~l~a~v~~~~~~~~~~~~l~~~l~~~-Lp-~~~vP~~~~~l~--~lP~t~~GKidR~~L 2498 (5163)
T PRK12316 2423 LQAHPAVREAVVVAQDGASGKQLVAYVVPDDAAEDLLAELRAWLAAR-LP-AYMVPAHWVVLE--RLPLNPNGKLDRKAL 2498 (5163)
T ss_pred HhhCcccceEEEEEEecCCCeEEEEEEEecCCCccCHHHHHHHHHhh-Cc-hhcCcceEeeec--ccCCCCCCccCHhhc
Q ss_pred HH
Q psy14338 1744 RD 1745 (1761)
Q Consensus 1744 ~~ 1745 (1761)
++
T Consensus 2499 ~~ 2500 (5163)
T PRK12316 2499 PK 2500 (5163)
T ss_pred CC
|
|
| >KOG3628|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-77 Score=724.46 Aligned_cols=1207 Identities=43% Similarity=0.715 Sum_probs=960.4
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
.+..+++..-.+++..+|.++.|.+|+ ..++||..+..+|.+.|+.-++ ..|..++|+|.++...++..+++
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk-~~~~twdkl~~rA~k~a~~~l~-------ksgl~~~~~vvL~Y~~~e~ie~~ 166 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGK-ATSITWDKLLNRAEKVAHVELN-------KSGLKPGDRVVLYYRKCEAIEFL 166 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCc-eeeeeHHHHHHHHHhhccHHhh-------ccCCCCCcEEEEEEEhhhhhHHh
Confidence 455666666688899999999999998 5899999999999999994443 66799999999999999989999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc-C
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA-K 240 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (1761)
+.++||.-+|.+.+|+.+.+..+ ++..+++....+++++.......+...... ......+.|+...... .
T Consensus 167 isl~gc~l~g~~~vp~~e~~s~~-----el~~i~~~~~~~~~l~t~a~~r~~~~~~~~----~s~~k~v~~w~t~~~k~~ 237 (1363)
T KOG3628|consen 167 ISLFGCFLLGIVAVPLSELSSSE-----ELKDIVNPTPERVALTTEAGERAFINDNSP----VSLAKAVAWWKTNDFKGN 237 (1363)
T ss_pred hhhccccccceeeccchhhhhhh-----hhhcccCCCccceEeehhhhHHHhhhccCc----ccHHHHHHhhhcccccce
Confidence 99999999999999998777654 799999999999999998766554432200 0000112222222221 1
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH--------------------HHcCCCCCCeEEE
Q psy14338 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT--------------------QACHYTEGENMVC 300 (1761)
Q Consensus 241 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~--------------------~~~~~~~~d~~l~ 300 (1761)
...+....+...-. .+||-||++++|+--||+.+|+ +.+..+... ..+++...+.++.
T Consensus 238 ~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~ 315 (1363)
T KOG3628|consen 238 YTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLT 315 (1363)
T ss_pred eehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceee
Confidence 11111112222222 8999999999999999999998 554433221 1234556677888
Q ss_pred ccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHH---HHHhhcC-------CCCCC
Q psy14338 301 VLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDL---HWGLLAT-------KDHKD 370 (1761)
Q Consensus 301 ~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~---~~~ll~~-------~~~~~ 370 (1761)
....+-..|++.+++.+|++|.|.+.++.+. ...|..+.+++.+++.+|+..-...+ ...+... .+...
T Consensus 316 ~~~~s~~lGlilGV~~alfsg~c~i~~p~~~-l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t 394 (1363)
T KOG3628|consen 316 NLDPSQQLGLILGVLVALFSGYCTIGCPKEV-LKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKT 394 (1363)
T ss_pred ccCcccccchhhhhhhhhhcCceeecCchhh-cCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccC
Confidence 7777888888888999999999999999653 67899999999999999987531000 0011111 11223
Q ss_pred CCCCceeEEEecCCCccCCHHHH----HHHHHHhhhCCCCC------------CccccccccccccceEeecCCCCCccc
Q psy14338 371 ISLSSLRLLLVGDGANPWSLSSC----DQFLSVFQSKGLRP------------DAICPCASSSECLTVSVRRPGRAGVNA 434 (1761)
Q Consensus 371 ~~l~~Lr~v~~gg~Ge~l~~~~~----~~~~~~~~~~g~~~------------~~l~n~YG~TE~~~~~~~~~~~~~~~~ 434 (1761)
.++++||.+++. -+.+..+.- ++|.+-++....+. .-.+..=+++|.+..+...+.......
T Consensus 395 ~d~sslk~C~Vt--c~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~ 472 (1363)
T KOG3628|consen 395 PDLSSLKGCMVT--CTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTL 472 (1363)
T ss_pred CCccceeeeEEe--eeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccC
Confidence 578999999998 677776643 44444221110000 001222344676666666666555567
Q ss_pred CCCccccccCcccceeeecCCCccCcccccccCCCCCC-cEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccc
Q psy14338 435 TGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPG-CIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLS 513 (1761)
Q Consensus 435 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~-~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T 513 (1761)
.|.+.+++.++..++++++.++......+..+|.-.++ ..+.|++++.+ ++|..+++|||||.++++..+||.-+..|
T Consensus 473 ~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~-~LC~~~eVGEIwVsS~~~~~~~~al~~~t 551 (1363)
T KOG3628|consen 473 PGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTN-QLCKTDEVGEIWVSSNSLGKLFYALDKQT 551 (1363)
T ss_pred ccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcc-cccccCcceeEEEecCCcccceeeccccc
Confidence 78889999999999999998877666667777777776 55777777766 59999999999999999999999999999
Q ss_pred cccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEE-ECCcccChHHHHHHHHhcCCccccccceEEEE
Q psy14338 514 NTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMT-VTGRKHNADDIIATVLAVEPMKFIYRGRIAVF 592 (1761)
Q Consensus 514 ~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvk-i~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~ 592 (1761)
...|...|....|.......+.|||=+|++. +|.++|+|-++|++. ++|.+....+|-+.-..++.++.+++..-+||
T Consensus 552 ~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF 630 (1363)
T KOG3628|consen 552 ENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVF 630 (1363)
T ss_pred cceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEE
Confidence 9999998887766666678899999999998 567777776666655 78999999888777777777766666666666
Q ss_pred EEecCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCCcc
Q psy14338 593 SIRVLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672 (1761)
Q Consensus 593 ~~~~~~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~~~ 672 (1761)
....-..++++.+++-++...+++-.++..+.+.....-+++.++|+.+++.+.||+|+-|-|.-..+++.|.++.++..
T Consensus 631 ~~saf~~E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~~F~~G~L~~~ 710 (1363)
T KOG3628|consen 631 DVSAFEDEHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQAFLEGSLPPS 710 (1363)
T ss_pred EEeeeecceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccccHHHHHHHHcCCCCcc
Confidence 66533367888888877777777777888888888889999999999999999999999888999999999999999999
Q ss_pred eeeecccccccCCCCCccccCCCccccchhhhccccCCCCcccccCCCccccCCCCCcccCCCCCcccccccceeccccc
Q psy14338 673 NVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANVLLCPHTCVTNLPKPREIHSDIGPASVMVGNIVQGNRL 752 (1761)
Q Consensus 673 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l 752 (1761)
.+++++++++.++|.+++.. ..++++|.+.++++++.++
T Consensus 711 ~v~f~phsav~Nlpi~~~~~-----------------------------------------~gi~~As~~~~nivs~~rl 749 (1363)
T KOG3628|consen 711 YVLFCPHSAVLNLPIPREKQ-----------------------------------------PGIWSASVMVGNIVSGKRL 749 (1363)
T ss_pred eeeeecchhhcCCCCchhhc-----------------------------------------cccccHHHHHHhhhcchhh
Confidence 99999999999998876543 3456777788888888887
Q ss_pred cccccCCCCCCCcccchhhhhHHHHHHHHHHhhhccCCceEEEEecCccccccccchhHHhHHHHHHHHHHhhhhhcccC
Q psy14338 753 ASAQGRDMGGPMEEDSDATRKHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTG 832 (1761)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (1761)
++..+++.+... |....+.+..+.++|+||...++++.+
T Consensus 750 q~s~~~d~~~~~--d~~~~~kl~~ile~Lq~R~a~tp~~~a--------------------------------------- 788 (1363)
T KOG3628|consen 750 QQSGGRDRGNIV--DNDSERKLLTILEILQWRAAKTPDHIA--------------------------------------- 788 (1363)
T ss_pred hhcccccccccc--cchhhhHHHHHHHHHHHHhhcCCCceE---------------------------------------
Confidence 777666654433 122222223333333333222221111
Q ss_pred CceeeecCCccchhhhhhccccccccccccCCCCCcccccCCchhhhHHHHhhhhccccccchhhhhhcCccchhhhhhh
Q psy14338 833 DHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTC 912 (1761)
Q Consensus 833 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1761)
T Consensus 789 -------------------------------------------------------------------------------- 788 (1363)
T KOG3628|consen 789 -------------------------------------------------------------------------------- 788 (1363)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccchhhhHHHHHHhhhhhccCCCcccccCCCcccccccccccccCCCCCCCCCCCCCcccccccccccchhhhcccccc
Q psy14338 913 SQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQ 992 (1761)
Q Consensus 913 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1761)
T Consensus 789 -------------------------------------------------------------------------------- 788 (1363)
T KOG3628|consen 789 -------------------------------------------------------------------------------- 788 (1363)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccchhccccceeeecchhhhhhhccccccccchhhhHHHHhhhccccceeeecceEEEEEeccCCcccccchhhh
Q psy14338 993 PKCDQTSQVEKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPL 1072 (1761)
Q Consensus 993 ~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 1072 (1761)
T Consensus 789 -------------------------------------------------------------------------------- 788 (1363)
T KOG3628|consen 789 -------------------------------------------------------------------------------- 788 (1363)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhccceEEEeEEEeeCCCccccCCCchhhhhhhhcccccCCCCcccccccCCCCCCccccccCChhhHHHHhhhcc
Q psy14338 1073 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPIYIWVQSPHNASGYFSLYGDESEYAQQFSARL 1152 (1761)
Q Consensus 1073 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1152 (1761)
T Consensus 789 -------------------------------------------------------------------------------- 788 (1363)
T KOG3628|consen 789 -------------------------------------------------------------------------------- 788 (1363)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCcccccccccccccccCCCCcCCCCCCCceEEccCC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEc
Q psy14338 1153 VTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIF 1231 (1761)
Q Consensus 1153 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~ 1231 (1761)
+...+.+ ....++||++|..++.++|..|+.+.-+++||.|++++
T Consensus 789 ----------------------------------~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy 834 (1363)
T KOG3628|consen 789 ----------------------------------FTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMY 834 (1363)
T ss_pred ----------------------------------EEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEc
Confidence 1111100 12356899999999999999999886689999999999
Q ss_pred CCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccC
Q psy14338 1232 PPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDT 1311 (1761)
Q Consensus 1232 ~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1311 (1761)
++|+|++++++||+.+|.+++|+.|.++.+.....+.+..|++.+++..|+++......+.+......+....|+.++..
T Consensus 835 ~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~ 914 (1363)
T KOG3628|consen 835 PPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVL 914 (1363)
T ss_pred CChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcc
Confidence 99999999999999999999999999988888888999999999999999999988877776554444444445544444
Q ss_pred CCCccc-----------hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCc
Q psy14338 1312 DDMPKK-----------KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPY 1380 (1761)
Q Consensus 1312 ~~~~~~-----------~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 1380 (1761)
.+.+.. ....+....+++.+||+=|.--++|.=-||.++|.++++.+...++...+.++..++.+.+++
T Consensus 915 ~~~~~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~ 994 (1363)
T KOG3628|consen 915 PKLPETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPY 994 (1363)
T ss_pred cccchhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCc
Confidence 443311 001112234568899999999999999999999999999999999999999999999999999
Q ss_pred cChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEE
Q psy14338 1381 CGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTC 1460 (1761)
Q Consensus 1381 ~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v 1460 (1761)
.+.|+..+.+...++|...+++++.++..+|..|+..|++++|.-++.+-+.++.+.+.+.+..........+.++ .+
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~--s~ 1072 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSS--SI 1072 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhccccc--ce
Confidence 9999999999999999999999999989999999999999999999999999999988766555444444555544 56
Q ss_pred EeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccce
Q psy14338 1461 VVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCL 1540 (1761)
Q Consensus 1461 ~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1540 (1761)
++-.+-.|...+.+.+.++|...|+....+...|+...+..+|++++.+++++..|.|.+.++++.+.+++.+.|++...
T Consensus 1073 vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L 1152 (1363)
T KOG3628|consen 1073 VVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLL 1152 (1363)
T ss_pred eeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCcccc
Confidence 66666667778899999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred eccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCC-CCceEeeCceeEEe
Q psy14338 1541 LESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNT-GELYARTGYLGFLR 1619 (1761)
Q Consensus 1541 ~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~-~~~~yrTGDlg~~~ 1619 (1761)
...|+..+++++.|++|++..+|..|+.||||+.|.+.+.+|++. +++ ...+.|-..-..|.. +.+|-||||+|+++
T Consensus 1153 ~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~-~d~-~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~ 1230 (1363)
T KOG3628|consen 1153 YDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTI-GDE-LRSNHFNARLSSGDLLGKSYARTGDLGFLR 1230 (1363)
T ss_pred ccCCcccccceeEEeCCccccccccCCcceEEecccccccccccc-Cch-hhhhhhhhhccccccccccceeeeeeeeee
Confidence 889999999999999999999999999999999999999999985 444 666777655444433 78999999999999
Q ss_pred ccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeCCeEEEEEEeCCCchh
Q psy14338 1620 RTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESE 1699 (1761)
Q Consensus 1620 ~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~~~~~a~v~~~~~~~~ 1699 (1761)
+++.+|.+ |.+.+.|+++|-.++.+.+||.|.+|.+||.++.+.||.|.+|+|+.++..+++++++.+ +..
T Consensus 1231 ~t~~t~~~--------~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~glvVvviE~~g-q~~ 1301 (1363)
T KOG3628|consen 1231 RTSLTDAN--------VERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQATGLVVVVIECHG-QQE 1301 (1363)
T ss_pred eeeccccc--------ceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeCCeEEEEEEecC-chh
Confidence 99888888 888888999999999999999999999999999999999999999999999999999987 667
Q ss_pred HhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCChhhhhcCC
Q psy14338 1700 ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPIYVAYNM 1761 (1761)
Q Consensus 1700 ~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~~~~~~~~~ 1761 (1761)
..+|...+.+.+|.+||.+-..+.|+++|.+|+++.|..+|..+++.|..++++++|++|++
T Consensus 1302 ~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~~~~v~yi~ 1363 (1363)
T KOG3628|consen 1302 LADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLDPIYVFYIR 1363 (1363)
T ss_pred HhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccceeeeeecC
Confidence 77888888888899999999999999999999999999999999999999999999999985
|
|
| >KOG1176|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-68 Score=658.96 Aligned_cols=490 Identities=20% Similarity=0.277 Sum_probs=411.8
Q ss_pred hhhcCCC-cEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCC--CCCCCEEEEEccCCCchhHHHHHHHH
Q psy14338 91 GSATYKA-PVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESS--LKSGDRIALVYPNNDPINFLCAFYGC 167 (1761)
Q Consensus 91 a~~~pd~-~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~G--v~~g~~V~l~~~~s~~~~~vva~lAv 167 (1761)
+..++++ +++++.+.+| +.+||+|+..++.|+|..|. +.| +++||+|++++||+ +++++++|||
T Consensus 26 ~~~~~~~~~~~i~~~~~g---~~~T~~e~~~~~~r~A~~L~--------~~~~~i~~gDvV~i~~pNs--~~~~~~~la~ 92 (537)
T KOG1176|consen 26 AFVYLDRNTSLVYQDSDG---RELTYSELHDRCRRLASALS--------ELGLGIKKGDVVGILAPNT--PEFVELALAV 92 (537)
T ss_pred ccccccCcceEEEecCCC---cEEcHHHHHHHHHHHHHHHH--------hcCCCCCCCCEEEEEcCCC--HHHHHHHHHH
Confidence 3334444 7888877554 58999999999999999999 554 89999999999999 9999999999
Q ss_pred HHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc---ccceeccCC---CcceeE------Ee
Q psy14338 168 IFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA---GEVVAFKGW---PKLTWF------VT 235 (1761)
Q Consensus 168 lkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~------~~ 235 (1761)
+.+|+++.|++|.+.+. ++.+.++++++++++++......+..... ..++.+... ...... ..
T Consensus 93 ~~~Ga~~~~~Np~~~~~-----ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 167 (537)
T KOG1176|consen 93 PMAGAVLNPLNPRLTAS-----EIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFE 167 (537)
T ss_pred HHcCccccccCcccCHH-----HHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchh
Confidence 99999999999999977 79999999999999999887665533221 122222111 000000 00
Q ss_pred ccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHH
Q psy14338 236 EHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
+........ . ....+.+|++.|+|||||||.||||++||++++.+.........++..++.++++|++|..|++. ++
T Consensus 168 ~~~~~~~~~-~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~-~~ 244 (537)
T KOG1176|consen 168 DLMPEGLPD-G-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLIT-LL 244 (537)
T ss_pred hccccCCCc-c-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHH-HH
Confidence 000111011 1 34557799999999999999999999999999999888777778888999999999999999996 77
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQ 395 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~ 395 (1761)
.++++|++.+++.+ .+++..+++.|++|+||+++++|+ ++..++..+.....+++++|.+.+| |.+++++++++
T Consensus 245 ~~~~~~~~~ii~~~---~f~~~~~~~~i~kykvt~~~~vP~-~~~~l~~~p~~~~~~l~sl~~v~~g--ga~~~~~~~~~ 318 (537)
T KOG1176|consen 245 LSLLAGGTTIICLR---KFDAELFLDLIEKYKVTHLFLVPP-VLNMLAKSPIVKKYDLSSLRSVLSG--GAPLSPATLEK 318 (537)
T ss_pred HHHHhCCceEEECC---CCCHHHHHHHHHHhCEEEEEcChH-HHHHHhcCCccCcccCCccEEEEec--CCCCCHHHHHH
Confidence 76666666666653 789999999999999999999976 8888888877777899999999999 99999999999
Q ss_pred HHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEE
Q psy14338 396 FLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIM 475 (1761)
Q Consensus 396 ~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 475 (1761)
+.++++.. .+.++||+||++..++..... . ..+++++|+++++.++
T Consensus 319 ~~~~l~~~-----~v~q~YGmTE~~~~~~~~~~~----------------------------~-e~k~~svG~~~~g~~~ 364 (537)
T KOG1176|consen 319 VKERLPNV-----TVIQGYGMTEAGGLITSNDWG----------------------------P-ERKPGSVGRLLPGVRV 364 (537)
T ss_pred HHHhCCCc-----eEEEeeccccccCceeecCCC----------------------------c-cCcccccCccccceEE
Confidence 99999622 499999999999555544321 0 1357899999999999
Q ss_pred EEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEecc
Q psy14338 476 TVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSR 555 (1761)
Q Consensus 476 ~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~ 555 (1761)
.|.++.|. .+|+++.||||++|++++.||||||+.|++.|. ++|||+|||+|++|+||+|++++|+
T Consensus 365 ~v~~e~g~--~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~------------~~GW~~TGDiGy~D~DG~l~IvdR~ 430 (537)
T KOG1176|consen 365 KVLDETGV--SLGPNQTGEICVRGPQVMKGYLKNPEATKEAFD------------DDGWFHTGDLGYFDEDGYLYIVDRS 430 (537)
T ss_pred EeeCCCCC--CCCCCCceEEEEECcccchhhcCChHHHHhhcc------------cCCccccCceEEEcCCCeEEEecch
Confidence 99999997 599999999999999999999999999999994 3599999999999999999999999
Q ss_pred CCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC--CCCHHHHHHHHHHHHHHhhhcc
Q psy14338 556 DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP--DCSEEESFQWMSRVLQAVDSIH 632 (1761)
Q Consensus 556 d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~--~~~~~~l~~~l~~~Lp~y~~P~ 632 (1761)
+|+||.+|+.|.|.|||+.|..+|.| .|||||+++|+ .|+.++|||+.++ .++++++.++++++||.||+|.
T Consensus 431 KdlIk~~G~qv~P~EiE~vL~~hP~V-----~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~y~~~~ 505 (537)
T KOG1176|consen 431 KDLIKYGGEQVSPAEIEAVLLTHPDV-----LEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPAYKLPG 505 (537)
T ss_pred hhheeeCCEEeCHHHHHHHHHhCCCc-----cEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCChhhccC
Confidence 99999999999999999999999998 79999999965 8999999999975 4789999999999999999999
Q ss_pred eeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 633 QVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 633 ~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
.+ +.+++||+|+||||.|+.|++.+.+.
T Consensus 506 ~V-------~Fvd~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 506 GV-------VFVDELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred eE-------EEeccCCCCCcchHHHHHHHHHHHhc
Confidence 97 44599999999999999999988653
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-69 Score=770.42 Aligned_cols=495 Identities=14% Similarity=0.193 Sum_probs=415.9
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|+++++++|+++|+++.+ +.+||+||+++++++|+.|+ +.|+++|++|+|+++|| .++
T Consensus 458 ~~l~~~~~~~~~~~p~~~Al~~~~------~~~Ty~eL~~~~~~la~~L~--------~~g~~~g~~V~l~~~~~--~~~ 521 (1296)
T PRK10252 458 TTLSALVAQQAAKTPDAPALADAR------YQFSYREMREQVVALANLLR--------ERGVKPGDSVAVALPRS--VFL 521 (1296)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcCC------CcEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHH
Confidence 579999999999999999998765 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccC
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAK 240 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1761)
++++|||+|+|++||||||.+|.+ |+.+++++++++++|++......+.......... .+....
T Consensus 522 i~~~la~~~~G~~~vpld~~~p~~-----~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 585 (1296)
T PRK10252 522 TLALHAIVEAGAAWLPLDTGYPDD-----RLKMMLEDARPSLLITTADQLPRFADVPDLTSLC-----------YNAPLA 585 (1296)
T ss_pred HHHHHHHHHhCCEEEecCccCHHH-----HHHHHHHhCCCCEEEECcchhhhcccCCCceeee-----------cccccc
Confidence 999999999999999999999976 9999999999999999987655443221000000 010000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhc
Q psy14338 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLN 320 (1761)
Q Consensus 241 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~ 320 (1761)
.....+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++||+++++ +|.+|++
T Consensus 586 -~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~l~~ 663 (1296)
T PRK10252 586 -PQGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWE-FFWPFIA 663 (1296)
T ss_pred -cccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHH-HHHHHhC
Confidence 00111122336889999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCC--CCCCCceeEEEecCCCccCCHHHHHHHHH
Q psy14338 321 GMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK--DISLSSLRLLLVGDGANPWSLSSCDQFLS 398 (1761)
Q Consensus 321 G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~--~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~ 398 (1761)
|+++++.++.. ..++..+.+.|+++++|++.++| +++..++...... ...+++||.+++| ||+++++++++|.+
T Consensus 664 G~~l~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P-s~l~~l~~~~~~~~~~~~~~~lr~i~~g--Ge~l~~~~~~~~~~ 739 (1296)
T PRK10252 664 GAKLVMAEPEA-HRDPLAMQQFFAEYGVTTTHFVP-SMLAAFVASLTPEGARQSCASLRQVFCS--GEALPADLCREWQQ 739 (1296)
T ss_pred CCEEEECChhc-cCCHHHHHHHHHHcCCeEEEeCH-HHHHHHHhhhccccccccCCCccEEEEe--cCCCCHHHHHHHHh
Confidence 99999987544 67899999999999999999996 4777766543221 2346899999999 99999999999988
Q ss_pred HhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEE
Q psy14338 399 VFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478 (1761)
Q Consensus 399 ~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~ 478 (1761)
.+ |. .++|.|||||++++++..+.... ..........+||+|++|++++|+
T Consensus 740 ~~---~~---~l~n~YG~TE~~~~~~~~~~~~~-----------------------~~~~~~~~~~~iG~p~~~~~~~i~ 790 (1296)
T PRK10252 740 LT---GA---PLHNLYGPTEAAVDVSWYPAFGE-----------------------ELAAVRGSSVPIGYPVWNTGLRIL 790 (1296)
T ss_pred cC---CC---EEEeCCCcchhhheeeeeecccc-----------------------cccccCCCCCCcccccCCCEEEEE
Confidence 76 44 39999999999877664432100 000001235789999999999999
Q ss_pred eCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCe
Q psy14338 479 KMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGL 558 (1761)
Q Consensus 479 d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~q 558 (1761)
|++++ ++|.|+.|||+|+|+++++||+|+|++|+++|+.+||..+ ++||||||+|++++||+++|+||+|+|
T Consensus 791 d~~~~--~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~------~~~y~TGDl~~~~~~G~l~~~GR~d~~ 862 (1296)
T PRK10252 791 DARMR--PVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPG------ERMYRTGDVARWLDDGAVEYLGRSDDQ 862 (1296)
T ss_pred CCCCC--CCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCC------CEEEecCceEEEcCCCcEEEecccCCe
Confidence 99887 5999999999999999999999999999999999998633 799999999999999999999999999
Q ss_pred EEECCcccChHHHHHHHHhcCCccccccceEEEEEEe----c-C--CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhh
Q psy14338 559 MTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIR----V-L--RDERICVIAEQRPD--CSEEESFQWMSRVLQAVD 629 (1761)
Q Consensus 559 vki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~----~-~--~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~ 629 (1761)
||++|+||+|+|||++|.+++.| .+++|+... + . ....+++|++...+ .+.++++++++++||.||
T Consensus 863 ik~~G~ri~~~eIE~~l~~~~~v-----~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~~~ 937 (1296)
T PRK10252 863 LKIRGQRIELGEIDRAMQALPDV-----EQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRERLPPHM 937 (1296)
T ss_pred EEEeeEEecHHHHHHHHHhCccc-----cceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHhhCchhc
Confidence 99999999999999999999888 688776542 1 1 22479999997654 467899999999999999
Q ss_pred hcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 630 SIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 630 ~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
+|..+ +.+++||+|+||||||++|++
T Consensus 938 ~P~~~-------~~~~~lP~t~~GKidr~~L~~ 963 (1296)
T PRK10252 938 VPVVL-------LQLDQLPLSANGKLDRKALPL 963 (1296)
T ss_pred CCcEE-------EEecCCCCCCCcChhHHhcCC
Confidence 99986 667999999999999999965
|
|
| >KOG1177|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-68 Score=599.61 Aligned_cols=503 Identities=17% Similarity=0.244 Sum_probs=429.9
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.+|+.++++-.+++.||+.|+++...+ .++||+|+.+.+.++|..|. ..|+++||+|+|..||+ .+
T Consensus 49 ~~Tigq~l~~~t~~v~dkea~Vf~~eg----~R~Tf~~~~~ev~slAaGll--------~lGL~kGDrVgvwgpN~--~~ 114 (596)
T KOG1177|consen 49 SETIGQLLETTTERVPDKEAAVFDHEG----IRLTFSEFVSEVESLAAGLL--------SLGLKKGDRVGVWGPNS--YE 114 (596)
T ss_pred cccHHHHHHHHhhccCcceEEEEeecc----chhhHHHHHHHHHHHHhhHH--------hhcCCCCCEEEEecCCh--HH
Confidence 579999999999999999999986543 47999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc---------Ccccccc-----------
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG---------LPKTAAG----------- 219 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~---------~~~~~~~----------- 219 (1761)
|+...|||.+||.+.|+++|.|+.+ ++++.|++.+++++++.+.+... .++....
T Consensus 115 w~l~~lA~A~AG~v~v~~NP~Yq~~-----elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp 189 (596)
T KOG1177|consen 115 WVLCQLACARAGLVLVNLNPAYQSE-----ELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLP 189 (596)
T ss_pred HHHHHHHHHHhceEEeccCcccccH-----HHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccc
Confidence 9999999999999999999999976 89999999999999987653211 1111100
Q ss_pred ---cceecc-CCC-cceeEEeccccCCCCCC-----CCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH
Q psy14338 220 ---EVVAFK-GWP-KLTWFVTEHLAKTPKDW-----APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA 289 (1761)
Q Consensus 220 ---~~~~~~-~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~ 289 (1761)
.++..+ +.+ ...|...+.+....... ......+|||++.|.|||||||.|||+.+||-|++|+......+
T Consensus 190 ~lthvi~~~ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r 269 (596)
T KOG1177|consen 190 ELTHVILADEDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGAR 269 (596)
T ss_pred cceEEEecCCCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHH
Confidence 001111 111 11222222222221110 01224579999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCC
Q psy14338 290 CHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK 369 (1761)
Q Consensus 290 ~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~ 369 (1761)
++++..+|++...|++|.+|...+++.+|+.|+|+|++.+ .++|...++.|.++++|.++.|| +|+..++..+...
T Consensus 270 ~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~---~f~~k~alqai~~ekcT~l~gtP-tM~~Dlln~~~~~ 345 (596)
T KOG1177|consen 270 AGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAP---SFDPKDALQAISNEKCTTLYGTP-TMFVDLLNIPQKQ 345 (596)
T ss_pred hCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCC---CCChHHHHHHHHhhceEEEecCh-HHHHHHhcchhhc
Confidence 9999999999999999999977689999999999999886 89999999999999999999996 6999999998888
Q ss_pred CCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccce
Q psy14338 370 DISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGV 449 (1761)
Q Consensus 370 ~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 449 (1761)
..+++++|..+.| |+++++++++...... .+. .+..+||+|||+.+.+....
T Consensus 346 ~~~~s~lr~~vig--Ga~~s~eLlk~iv~~~---~m~--~i~v~YG~TEts~v~~~~~~--------------------- 397 (596)
T KOG1177|consen 346 QVDLSSLRKGVIG--GAPVSPELLKLIVNQM---NMK--DIAVAYGLTETSPVLFMSLL--------------------- 397 (596)
T ss_pred cCchhhhhhheeC--CCCCCHHHHHHHHHhh---Cce--eeEEEeeccccCcceeeecC---------------------
Confidence 8999999999999 9999999999999876 333 48899999999966554331
Q ss_pred eeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCcc
Q psy14338 450 VRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTAL 529 (1761)
Q Consensus 450 ~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~ 529 (1761)
+++......++|+.+++.+..|+|.+|. .+|.|..|||||+|...+.|||++++.|.+.-
T Consensus 398 ------~D~~~~~~ksVG~~m~h~Ea~iv~~~g~--~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti------------ 457 (596)
T KOG1177|consen 398 ------GDPPEERIKSVGHLMDHYEAAIVDKDGS--EVPLGTKGELLIRGYSTMLGYWGEEEKTKETI------------ 457 (596)
T ss_pred ------CCCHHHHHhhhhhcccccccccccCCCC--ccccCCCceEEEEechhheeecCCcccchhhc------------
Confidence 1112345679999999999999999987 59999999999999999999999999999876
Q ss_pred CCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEe
Q psy14338 530 SQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQ 608 (1761)
Q Consensus 530 ~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~ 608 (1761)
+.++||+|||+|++|++|+++++||.||+|+.+|++|+|.|||+.|.+++.| .++.|++++| ..|+.+||++..
T Consensus 458 ~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V-----~~a~VVGV~D~R~GE~VCA~vRL 532 (596)
T KOG1177|consen 458 GNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLV-----KEAHVVGVPDERLGEEVCACVRL 532 (596)
T ss_pred ccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCe-----eeEEEEccCCCcccceEEEEEEe
Confidence 4699999999999999999999999999999999999999999998888888 6999999995 589999999988
Q ss_pred CCC----CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 609 RPD----CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 609 ~~~----~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
.++ .+.++|+.+|+.+|..|++|+++ +++++||+|.+|||+|-+++++..
T Consensus 533 qe~~e~~~t~E~lKa~Ck~klaHFKiPky~-------vf~~~FPlT~tGKIqKFeir~~~k 586 (596)
T KOG1177|consen 533 QEGAEGKTTAETLKAMCKGKLAHFKIPKYF-------VFVDEFPLTTTGKIQKFEIREMSK 586 (596)
T ss_pred eccccccccHHHHHHHHhcccccccCCcEE-------EEeccCcccccccchhHHHHHHHH
Confidence 765 47899999999999999999986 666999999999999999999886
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-68 Score=768.03 Aligned_cols=561 Identities=16% Similarity=0.177 Sum_probs=430.2
Q ss_pred cHHHHHHhcCCCCCCCCCCCCCCcCCCCCCcccc------CCCcchhHHHHHHHHhhhcCCCcEEEEECCC---CceeEE
Q psy14338 42 DDIELEIAANPKDPNAPKPEGGVMTPAPGESLVV------PSGLPRNLEAAIQRYGSATYKAPVATVLDPN---GKLSIT 112 (1761)
Q Consensus 42 ~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~------~~~~~~~l~~~~~~~a~~~pd~~Av~~~d~~---g~~~~~ 112 (1761)
.+..+++ ....+|+.++.+++++++.+...+.. ......+++++|+++++++|+++|+++.... ....++
T Consensus 192 ~f~~lL~-~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~ 270 (1389)
T TIGR03443 192 QLAQLLS-AASSNPDEPIGKVSLITPSQKSLLPDPTKDLDWSGFRGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRS 270 (1389)
T ss_pred HHHHHHH-HHHhCcCCceecccCCCHHHHhhhhccccccCcCcccCcHHHHHHHHHHhCCCCeEEEeccccccccCCCce
Confidence 4455555 45556666666666655544332211 1112468999999999999999999864321 001158
Q ss_pred EeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHH
Q psy14338 113 LTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIG 192 (1761)
Q Consensus 113 lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~ 192 (1761)
+||+||+++++++|++|+ +.|+++|++|+|+++|+ +++++++|||+|+|++|||+||.+|.+ |+.
T Consensus 271 lTY~eL~~~~~~lA~~L~--------~~gv~~g~~V~i~~~~~--~~~i~~~lA~l~~G~~~vpldp~~p~~-----~~~ 335 (1389)
T TIGR03443 271 FTYKQINEASNILAHYLL--------KTGIKRGDVVMIYAYRG--VDLVVAVMGVLKAGATFSVIDPAYPPA-----RQT 335 (1389)
T ss_pred eeHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEecCC--HHHHHHHHHHHhhCcEEeccCCCCcHH-----HHH
Confidence 999999999999999999 89999999999999999 999999999999999999999999976 999
Q ss_pred HHHhcCCCcEEEEcccccc---cCcccccccceeccCCCcceeEEe-------------ccccCCC--CCCCCCCCCCCC
Q psy14338 193 FLLGSCDIQVALTSDACLK---GLPKTAAGEVVAFKGWPKLTWFVT-------------EHLAKTP--KDWAPQPRLTDD 254 (1761)
Q Consensus 193 ~il~~~~~~~vl~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~--~~~~~~~~~~~~ 254 (1761)
+++++++++++|+...... .+..............+.+.+... +...... ..........++
T Consensus 336 ~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (1389)
T TIGR03443 336 IYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEGGETDVLAPYQALKDTPTGVVVGPD 415 (1389)
T ss_pred HHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccccccccccccccccccccccCCCCCcCCCC
Confidence 9999999999998764211 110000000000000000000000 0000000 000112234689
Q ss_pred CcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccC
Q psy14338 255 TPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKV 334 (1761)
Q Consensus 255 ~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~ 334 (1761)
++|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++||.++++ +|.+|+.|+++++++... ..
T Consensus 416 d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~-i~~~L~~G~~l~~~~~~~-~~ 493 (1389)
T TIGR03443 416 SNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPIQRD-MFTPLFLGAQLLVPTADD-IG 493 (1389)
T ss_pred CceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecchHHH-HHHHHhCCCEEEEcChhh-cc
Confidence 9999999999999999999999999999999999999999999999999999999985 999999999999987533 46
Q ss_pred CHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcccccc
Q psy14338 335 NPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCA 414 (1761)
Q Consensus 335 ~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~Y 414 (1761)
++..+.+.|+++++|+++++| +++..+.... ...+++||.+++| |+++++...++|.+..+. + .++|.|
T Consensus 494 ~~~~l~~~i~~~~vt~~~~~P-s~~~~l~~~~---~~~~~~lr~~~~g--Ge~l~~~~~~~~~~~~~~--~---~l~n~Y 562 (1389)
T TIGR03443 494 TPGRLAEWMAKYGATVTHLTP-AMGQLLSAQA---TTPIPSLHHAFFV--GDILTKRDCLRLQTLAEN--V---CIVNMY 562 (1389)
T ss_pred CHHHHHHHHHHhCCeEEEeCH-HHHHHHHhcc---cccCCCccEEEEe--cccCCHHHHHHHHHhCCC--C---EEEECc
Confidence 799999999999999999996 4776665432 2457899999999 999999999998877542 2 599999
Q ss_pred ccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceE
Q psy14338 415 SSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGE 494 (1761)
Q Consensus 415 G~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GE 494 (1761)
|+||++++++......... +...........++|+|++|++++|+|+++...++|.|++||
T Consensus 563 G~TE~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GE 623 (1389)
T TIGR03443 563 GTTETQRAVSYFEIPSRSS-------------------DSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGE 623 (1389)
T ss_pred cCCccceeEEEEEcccccc-------------------ccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceE
Confidence 9999987665432110000 000000011356899999999999999876555799999999
Q ss_pred EEEecCCccccccCCCccccccccccccccCCC----------------ccCCCceEeecceEEEeCCCeEEEEeccCCe
Q psy14338 495 ICVASTGTGSQYWGLPGLSNTTFKVTPLLADGT----------------ALSQDTYTRSGLLGFLGPGGLVFVCGSRDGL 558 (1761)
Q Consensus 495 L~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~----------------~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~q 558 (1761)
|||+|+++++||+|+|++|+++|+.+||..++. ...++|||||||+|++++||+|+|+||+|||
T Consensus 624 L~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~ 703 (1389)
T TIGR03443 624 IYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQ 703 (1389)
T ss_pred EEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCE
Confidence 999999999999999999999999988742110 0123689999999999999999999999999
Q ss_pred EEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC---C----------------------
Q psy14338 559 MTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD---C---------------------- 612 (1761)
Q Consensus 559 vki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~---~---------------------- 612 (1761)
||++|+||+|+|||++|.+++.| .+++|++.++. .++.+++|+++... .
T Consensus 704 Iki~G~rI~p~eIE~~l~~~p~V-----~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1389)
T TIGR03443 704 VKIRGFRIELGEIDTHLSQHPLV-----RENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIK 778 (1389)
T ss_pred EEeCcEEecHHHHHHHHHhCcch-----heeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhh
Confidence 99999999999999999998887 68888887743 56789999987521 0
Q ss_pred ---CHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 613 ---SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 613 ---~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
..++++++|+++||.||+|..+ +++++||+|+||||||++|++
T Consensus 779 ~~~~~~~l~~~l~~~Lp~y~~P~~~-------~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 779 YRKLIKDIREYLKKKLPSYAIPTVI-------VPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred hhhhHHHHHHHHHhhCCcccCCceE-------EEcccCCCCCCccccHhhcCC
Confidence 1457899999999999999986 677999999999999999974
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG1177|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-68 Score=594.70 Aligned_cols=485 Identities=18% Similarity=0.265 Sum_probs=411.6
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
++.||+.|+++. .++.++||+|+...+.++|+.|.+. |+++||||+|..||+.+|+..+|||.+||.+.|+++|.|
T Consensus 61 ~~v~dkea~Vf~---~eg~R~Tf~~~~~ev~slAaGll~l-GL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~NP~Y 136 (596)
T KOG1177|consen 61 ERVPDKEAAVFD---HEGIRLTFSEFVSEVESLAAGLLSL-GLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLNPAY 136 (596)
T ss_pred hccCcceEEEEe---eccchhhHHHHHHHHHHHHhhHHhh-cCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccCccc
Confidence 367999998852 3556799999999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHH-----HHHhhhccc----c--ccccccCCcc----ccCCCCc--------
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVI-----KLLKSKEAS----N--VVDIKSWPTI----LDTDDMP-------- 1315 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~-----~~~~~~~~~----~--~~~~~~~~~~----~~~~~~~-------- 1315 (1761)
+.. ++++.|++.+++++|+.+.+. +.+.+.... . .+....++.+ +..++.+
T Consensus 137 q~~------elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~Ga~~~s 210 (596)
T KOG1177|consen 137 QSE------ELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLPGAFLLS 210 (596)
T ss_pred ccH------HHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCCCceehH
Confidence 988 999999999999999876432 222222110 0 0000001100 0000000
Q ss_pred ---------c-chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhH
Q psy14338 1316 ---------K-KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGF 1385 (1761)
Q Consensus 1316 ---------~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1385 (1761)
. ...........|++++.|.|||||||.|||+.+||-|++|+......+++++.+++++...|++|.+|.
T Consensus 211 ev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H~~G~ 290 (596)
T KOG1177|consen 211 EVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLYHCFGC 290 (596)
T ss_pred HHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchHHHHHH
Confidence 0 011112234678999999999999999999999999999999999999999998899999999999998
Q ss_pred HHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecC
Q psy14338 1386 ALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAE 1465 (1761)
Q Consensus 1386 ~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe 1465 (1761)
+..++.+|..|+|+|++.+ .|+|...++.|.++++|.++.+|+++..+++. +.....+++++|..+.||+
T Consensus 291 ~~~~ma~l~~gat~Vfp~~---~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~-------~~~~~~~~s~lr~~vigGa 360 (596)
T KOG1177|consen 291 VLGVMAALMHGATIVFPAP---SFDPKDALQAISNEKCTTLYGTPTMFVDLLNI-------PQKQQVDLSSLRKGVIGGA 360 (596)
T ss_pred HHHHHHHHHhCcEEEeeCC---CCChHHHHHHHHhhceEEEecChHHHHHHhcc-------hhhccCchhhhhhheeCCC
Confidence 8899999999999999887 59999999999999999999999999999863 4567889999999999999
Q ss_pred CCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccc
Q psy14338 1466 ERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGK 1545 (1761)
Q Consensus 1466 ~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 1545 (1761)
++++ ++.+.+...++. ..+...||+||++.+.+.... +++...+..++|+
T Consensus 361 ~~s~-eLlk~iv~~~~m-----~~i~v~YG~TEts~v~~~~~~------------------------~D~~~~~~ksVG~ 410 (596)
T KOG1177|consen 361 PVSP-ELLKLIVNQMNM-----KDIAVAYGLTETSPVLFMSLL------------------------GDPPEERIKSVGH 410 (596)
T ss_pred CCCH-HHHHHHHHhhCc-----eeeEEEeeccccCcceeeecC------------------------CCCHHHHHhhhhh
Confidence 9999 888887776653 468899999998765544332 2233344567999
Q ss_pred ccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCC
Q psy14338 1546 LLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAG 1625 (1761)
Q Consensus 1546 p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d 1625 (1761)
.+++.+..|+|.+ |.++|.|+.|||||+|.+.|.|||+ +++.|.+.. +.++||+|||+|++ |
T Consensus 411 ~m~h~Ea~iv~~~-g~~v~~~~~Gel~iRGY~tMl~Ywg---~~~kT~eti--------~~drW~~TGDi~~m------~ 472 (596)
T KOG1177|consen 411 LMDHYEAAIVDKD-GSEVPLGTKGELLIRGYSTMLGYWG---EEEKTKETI--------GNDRWYDTGDIAVM------D 472 (596)
T ss_pred cccccccccccCC-CCccccCCCceEEEEechhheeecC---Ccccchhhc--------ccccceecCceEEE------c
Confidence 9999999999954 9999999999999999999999999 999999987 68999999999999 9
Q ss_pred CCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCCc---
Q psy14338 1626 VAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE--- 1697 (1761)
Q Consensus 1626 ~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~~--- 1697 (1761)
++ |+ ++++||.||+|+.+|++|+|.|||+ .|.+||.|.++.|++.+ +.++|+|.+....
T Consensus 473 en--------G~----i~iVGRskdmI~rGGENVyP~ElE~-fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~ 539 (596)
T KOG1177|consen 473 EN--------GT----IEIVGRSKDMIIRGGENVYPTELED-FLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGK 539 (596)
T ss_pred CC--------Cc----EEEEEcccCeEEeCCcccChHHHHH-HHhhCCCeeeEEEEccCCCcccceEEEEEEeecccccc
Confidence 99 99 9999999999999999999999999 99999999999999864 4788999874332
Q ss_pred hhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1698 SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1698 ~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
.+.++|+++|+.+ |. +|++|++|++++ ++|+|.+|||+|-+++++..
T Consensus 540 ~t~E~lKa~Ck~k-la-HFKiPky~vf~~--~FPlT~tGKIqKFeir~~~k 586 (596)
T KOG1177|consen 540 TTAETLKAMCKGK-LA-HFKIPKYFVFVD--EFPLTTTGKIQKFEIREMSK 586 (596)
T ss_pred ccHHHHHHHHhcc-cc-cccCCcEEEEec--cCcccccccchhHHHHHHHH
Confidence 4789999999997 88 999999999999 99999999999999999985
|
|
| >COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-67 Score=639.68 Aligned_cols=492 Identities=19% Similarity=0.256 Sum_probs=406.2
Q ss_pred HHHHHhh-hcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHH
Q psy14338 86 AIQRYGS-ATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAF 164 (1761)
Q Consensus 86 ~~~~~a~-~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~ 164 (1761)
.++++.. ..+|++|+++.++.+.. +++||+||.+.++++|+.|++ ..|+ +||+|+|++|+. ++.+++|
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~-~~~Ty~~L~~~v~r~A~~L~~-------~~gv-kGDrV~iymp~~--pe~~~a~ 82 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLF-RELTYGDLRREVARLANALKD-------LGGV-KGDRVAIYMPNS--PEAVIAL 82 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCc-eEEEHHHHHHHHHHHHHHHHH-------hCCC-CCCEEEEEcCCC--HHHHHHH
Confidence 4455554 34789999998766544 799999999999999999982 2558 999999999999 9999999
Q ss_pred HHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccccc--------ceeccCCCcceeEEec
Q psy14338 165 YGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGE--------VVAFKGWPKLTWFVTE 236 (1761)
Q Consensus 165 lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 236 (1761)
|||+|+||+++|+.+.++++ .+++.++++++++|||.+............. ++...... ....+
T Consensus 83 LA~~riGAI~~~vf~~f~~~-----al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~---~~~~~ 154 (528)
T COG0365 83 LATARIGAIPAVVSPGLSAE-----AVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG---LWYDE 154 (528)
T ss_pred HHHHHcCCEEeecccCCCHH-----HHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc---ccHHH
Confidence 99999999999999999987 6999999999999999988766544322111 11111100 11122
Q ss_pred cccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHH-HHHcCCCCCCeEEEccCCcchhhhHHHHH
Q psy14338 237 HLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRAL-TQACHYTEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
.....+. .......+++|++||+|||||||+||||+++|++++...... ...+.+.++|++++.+++.|..|.+..++
T Consensus 155 ~~~~~~~-~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~ 233 (528)
T COG0365 155 AVEKASE-KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVF 233 (528)
T ss_pred HhhccCC-CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHH
Confidence 2222221 222334789999999999999999999999999877666544 45678889999999999999999998899
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQ 395 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~ 395 (1761)
.+|.+|+++++.+...+. +++.+++.|+++++|.++.. |+.+.+|.........++++||.+.+. ||||+++.++.
T Consensus 234 ~pL~~Gat~~~~eg~p~~-~~~~~~~~ie~~~vt~~~ts-PT~~R~l~~~g~~~~~dlssLr~~~Sa--GEPLnpe~~~w 309 (528)
T COG0365 234 SPLASGATTVLYDGRPFY-SPERLWEALEKYKVTIFGTS-PTFLRRLMKLGLGEPYDLSSLRVLGSA--GEPLNPEAFEW 309 (528)
T ss_pred HHHhcCCeEEEeCCCCCC-CHHHHHHHHHHhCCceEeeC-HHHHHHHHhcCCcccccchhheeeecc--CCCCCHHHHHH
Confidence 999999999999854223 59999999999999999987 578888887765667899999999999 99999999999
Q ss_pred HHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEE
Q psy14338 396 FLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIM 475 (1761)
Q Consensus 396 ~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 475 (1761)
|.+.+ |++ +.+.||.||++.+...... ..+.++.|+|+||.++
T Consensus 310 ~~~~~---g~~---i~d~~gqTEtg~~~~~~~~-------------------------------~~~~g~~g~p~pG~~~ 352 (528)
T COG0365 310 FYSAL---GVW---ILDIYGQTETGMGFIAGRP-------------------------------PVKNGSSGLPLPGYAV 352 (528)
T ss_pred HHHHh---CCC---EeccccccccCccccCCCC-------------------------------CcCCCCCCCCCCCcee
Confidence 99999 655 9999999999843322110 1234455999999999
Q ss_pred EEEeCCCCcccCCCCCceEEEEecC--CccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 476 TVVKMDSPSYLCKTDEVGEICVAST--GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 476 ~I~d~~~~~~~~p~G~~GEL~i~G~--~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
.|+|++|+ ++|.|+ |+|+|+.+ ++++||||||+.+.++|. ++||.|||.+++|+||+++|+|
T Consensus 353 ~vvdd~g~--~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~-------------~~~y~tGD~~~~DedGy~~i~G 416 (528)
T COG0365 353 RRVDDEGN--PVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYF-------------GRWYRTGDWAERDEDGYFWLHG 416 (528)
T ss_pred EEECCCCC--cCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHh-------------hceeecCceeEEccCCCEEEEe
Confidence 99999976 599999 99999987 999999999999999985 4499999999999999999999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCC----HHHHHHHHHHHHHHh
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCS----EEESFQWMSRVLQAV 628 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~----~~~l~~~l~~~Lp~y 628 (1761)
|.||.||+.|+||.+.|||++|.++|.| .||+|++++|. .|+.++|||+++++.. .++|++++++.+.+|
T Consensus 417 R~DDvI~vsG~Rig~~EvE~~l~~hP~V-----aEaAvVg~pd~~kg~~v~afVvL~~g~~~~~L~~ei~~~vr~~~~~~ 491 (528)
T COG0365 417 RSDDVIKVSGKRIGPLEIESVLLAHPAV-----AEAAVVGVPDPGKGQIVLAFVVLAAGVEPNELAEEIRRHVARNIGPH 491 (528)
T ss_pred eccceEeccCeeccHHHHHHHHHhCcce-----eeeEEEeccCCCCCcEEEEEEEecCCCChHHHHHHHHHHHHhccCcc
Confidence 9999999999999999999999999988 79999999964 7788999999998764 455666676666669
Q ss_pred hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 629 DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 629 ~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+.|+.| .| +++||+|.||||.|+.|++.+.+
T Consensus 492 ~~p~~i-----~f--v~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 492 AIPRKI-----RF--VDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred cCCceE-----EE--ecCCCCCCcccHHHHHHHHHHhh
Confidence 999987 45 49999999999999999998764
|
|
| >COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-67 Score=676.62 Aligned_cols=504 Identities=25% Similarity=0.362 Sum_probs=421.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.+++++++.++|+++|+.+.+..+ ++||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++
T Consensus 10 ~~~~~~~l~~~a~~~~~~~a~~~~~~~~----~~Ty~el~~~~~~~A~~L~--------~~~v~~gdrVail~~N~--~e 75 (534)
T COG0318 10 ELTLASLLERAARRNPDRPALIFLGRGG----RLTYRELDRRANRLAAALQ--------ALGVKPGDRVAILLPNS--PE 75 (534)
T ss_pred cccHHHHHHHHHHhCCCceEEEEcCCCc----eeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HH
Confidence 4679999999999999999999987432 4999999999999999999 88899999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----cceeccCCCccee--E
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----EVVAFKGWPKLTW--F 233 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~ 233 (1761)
+++++|||+++|++++||+|.+... ++.++++++++++++++....+.+...... ..+.......... .
T Consensus 76 ~~~~~~a~~~~Gav~vpln~~~~~~-----~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (534)
T COG0318 76 FLIAFLAALRAGAVAVPLNPRLTPR-----ELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPIT 150 (534)
T ss_pred HHHHHHHHHhcCEEEeecCcccCHH-----HHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEeccccccccccc
Confidence 9999999999999999999999765 899999999999999998733222221110 0000000000000 0
Q ss_pred EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcC--CCCCCeEEEccCCcchhhhH
Q psy14338 234 VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH--YTEGENMVCVLDFKRETGLW 311 (1761)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~ 311 (1761)
..+................++|+|+|+|||||||.||||++||+|++.+.......++ ++++|+++.++|++|++|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~ 230 (534)
T COG0318 151 LEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLI 230 (534)
T ss_pred HHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHH
Confidence 0111111111111112267999999999999999999999999999999999988888 89999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCc-eeEEEecCCCccCCH
Q psy14338 312 HSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSS-LRLLLVGDGANPWSL 390 (1761)
Q Consensus 312 ~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~-Lr~v~~gg~Ge~l~~ 390 (1761)
..++.+++.|+++++.++. .+++..++..+.++++|++.++| +++..++..+.....++.+ ||.++.| |+++++
T Consensus 231 ~~~~~~~~~G~~~v~~~~~--~f~~~~~~~~i~~~~~t~~~~vP-t~~~~ll~~~~~~~~~~~~~lr~~~~g--g~~~~~ 305 (534)
T COG0318 231 VGLLAPLLGGGTLVLLSPE--PFDPEEVLWLIEKYKVTVLSGVP-TFLRELLDNPEKDDDDLSSSLRLVLSG--GAPLPP 305 (534)
T ss_pred HHHHHHHHcCCEEEeCCCC--CcCHHHHHHHHHHhcceEEecch-HHHHHHHhCCccCccccccceEEEEec--CCcCCH
Confidence 7566669999999998742 58999999999999999999996 5888888887766666665 9999999 999999
Q ss_pred HHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC
Q psy14338 391 SSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM 470 (1761)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 470 (1761)
+++++|.+.++.. .++++||+||++..++..+... . ......+|+|+
T Consensus 306 ~~~~~~~~~~~~~-----~i~~~YG~TE~~~~~~~~~~~~---------------------------~-~~~~~~~G~~~ 352 (534)
T COG0318 306 ELLERFEERFGPI-----AILEGYGLTETSPVVTINPPDD---------------------------L-LAKPGSVGRPL 352 (534)
T ss_pred HHHHHHHHHhCCC-----ceEEeecccccCceeecCCCch---------------------------h-hhcCCcccccC
Confidence 9999999998532 4999999999997666544220 0 12345679999
Q ss_pred CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEE
Q psy14338 471 PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVF 550 (1761)
Q Consensus 471 ~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~ 550 (1761)
+|++++|+|+++.. ++| |++|||+|+||+++.||||+|+.|++.|. +++||+|||+|++|+||+++
T Consensus 353 pg~~v~Ivd~~~~~-~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~------------~~gW~~TGDlg~~d~~G~l~ 418 (534)
T COG0318 353 PGVEVRIVDPDGGE-VLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFD------------EDGWLRTGDLGYVDEDGYLY 418 (534)
T ss_pred CCcEEEEEeCCCCc-cCC-CCceEEEEECchhhhhhcCChHHHHHhhc------------cCCeeeecceEEEcCCccEE
Confidence 99999999988863 566 99999999999999999999999999884 24999999999999999999
Q ss_pred EEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCC----CHHHHHHHHHHHH
Q psy14338 551 VCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDC----SEEESFQWMSRVL 625 (1761)
Q Consensus 551 ~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~----~~~~l~~~l~~~L 625 (1761)
|+||+||+||++|++|+|.|||.++.+++.| .+|+|++++++ .|+.++|+++.+++. +.++++++|++++
T Consensus 419 i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V-----~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i~~~~~~~l 493 (534)
T COG0318 419 IVGRLKDLIISGGENIYPEEIEAVLAEHPAV-----AEAAVVGVPDERWGERVVAVVVLKPGGDAELTAEELRAFLRKRL 493 (534)
T ss_pred EEeccceEEEeCCeEECHHHHHHHHHhCCCc-----ceEEEEeCCCCccCceEEEEEEEcCCCCCCCCHHHHHHHHHhhh
Confidence 9999999999999999999999999999888 79999999965 899999999998653 7899999999999
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+.|++|+.+ +.+++||+|++||++|++|++.+..
T Consensus 494 ~~~~~P~~v-------~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 494 ALYKVPRIV-------VFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred hcccCCeEE-------EEeCCCCCCCchhhhHHHHHHHHHh
Confidence 999999997 5569999999999999999998865
|
|
| >KOG1176|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-66 Score=636.01 Aligned_cols=482 Identities=22% Similarity=0.326 Sum_probs=398.5
Q ss_pred CCC-CceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcC--CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1182 PVP-PGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAK--INTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1182 P~~-~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~G--v~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
++. +++++-+ ..++.+||+|+..++.|+|..|.+. | +++||+|++++||+++++++++||+.+|+++.|++|.+
T Consensus 30 ~~~~~~~i~~~--~~g~~~T~~e~~~~~~r~A~~L~~~-~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~ 106 (537)
T KOG1176|consen 30 LDRNTSLVYQD--SDGRELTYSELHDRCRRLASALSEL-GLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRL 106 (537)
T ss_pred ccCcceEEEec--CCCcEEcHHHHHHHHHHHHHHHHhc-CCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCccc
Confidence 344 6666322 2358999999999999999999987 5 89999999999999999999999999999999997754
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc---ccccccc------CCcccc----CCCCccchhhhccCC
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS---NVVDIKS------WPTILD----TDDMPKKKLAALYRA 1325 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~----~~~~~~~~~~~~~~~ 1325 (1761)
+..++.+.++++++++++++......+.+.... .++.... ...... .........+.....
T Consensus 107 ------~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (537)
T KOG1176|consen 107 ------TASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRP 180 (537)
T ss_pred ------CHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCccccc
Confidence 445999999999999999999887776544321 1111110 111000 000000000000344
Q ss_pred CCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCC
Q psy14338 1326 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 1405 (1761)
Q Consensus 1326 ~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~ 1405 (1761)
.+.+|++.|+|||||||.||||++||++++.+.........+...+..+..+|++|..|+.. ++.++++|++.++...
T Consensus 181 ~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~-~~~~~~~~~~~ii~~~- 258 (537)
T KOG1176|consen 181 VSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLIT-LLLSLLAGGTTIICLR- 258 (537)
T ss_pred CCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHH-HHHHHHhCCceEEECC-
Confidence 56699999999999999999999999999999888888888888889999999999999854 5554455444444443
Q ss_pred ccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCC
Q psy14338 1406 EVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGL 1485 (1761)
Q Consensus 1406 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~ 1485 (1761)
.+++..+++.|++|+||+++++|.++..|++. +....++++++|.+.+||+++++ .+.+++.+.++.
T Consensus 259 --~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~-------p~~~~~~l~sl~~v~~gga~~~~-~~~~~~~~~l~~--- 325 (537)
T KOG1176|consen 259 --KFDAELFLDLIEKYKVTHLFLVPPVLNMLAKS-------PIVKKYDLSSLRSVLSGGAPLSP-ATLEKVKERLPN--- 325 (537)
T ss_pred --CCCHHHHHHHHHHhCEEEEEcChHHHHHHhcC-------CccCcccCCccEEEEecCCCCCH-HHHHHHHHhCCC---
Confidence 47999999999999999999999999999873 23467899999999999999999 787888887752
Q ss_pred CCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCC
Q psy14338 1486 SPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGD 1565 (1761)
Q Consensus 1486 ~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~ 1565 (1761)
..+.+.||+||+++.++.+....+ .+.+++|++++|.+..|.+ ++|+.+|+
T Consensus 326 --~~v~q~YGmTE~~~~~~~~~~~~e--------------------------~k~~svG~~~~g~~~~v~~-e~g~~l~~ 376 (537)
T KOG1176|consen 326 --VTVIQGYGMTEAGGLITSNDWGPE--------------------------RKPGSVGRLLPGVRVKVLD-ETGVSLGP 376 (537)
T ss_pred --ceEEEeeccccccCceeecCCCcc--------------------------CcccccCccccceEEEeeC-CCCCCCCC
Confidence 579999999999866555443222 2345699999999988887 66999999
Q ss_pred CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEE
Q psy14338 1566 SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVV 1645 (1761)
Q Consensus 1566 G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~ 1645 (1761)
++.||||++|++++.|||| ||++|++.| +++|||+|||+|++ |+| |+ |+++
T Consensus 377 ~~~GEI~vrg~~imkGY~~---NpeaT~~~~--------~~~GW~~TGDiGy~------D~D--------G~----l~Iv 427 (537)
T KOG1176|consen 377 NQTGEICVRGPQVMKGYLK---NPEATKEAF--------DDDGWFHTGDLGYF------DED--------GY----LYIV 427 (537)
T ss_pred CCceEEEEECcccchhhcC---ChHHHHhhc--------ccCCccccCceEEE------cCC--------Ce----EEEe
Confidence 9999999999999999999 999999999 45599999999999 999 99 9999
Q ss_pred cccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEe-----eCCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCcee
Q psy14338 1646 GALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFT-----WTNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIV 1719 (1761)
Q Consensus 1646 GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~-----~~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP 1719 (1761)
+|++|+||.+|++|+|.|||+ +|..||.|.||+|++ +||.++|+|+.+ +...++++++++|+++ |+ +||+|
T Consensus 428 dR~KdlIk~~G~qv~P~EiE~-vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~-l~-~y~~~ 504 (537)
T KOG1176|consen 428 DRSKDLIKYGGEQVSPAEIEA-VLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKK-LP-AYKLP 504 (537)
T ss_pred cchhhheeeCCEEeCHHHHHH-HHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhh-CC-hhhcc
Confidence 999999999999999999999 999999999999998 567899999985 6888999999999998 88 79999
Q ss_pred eEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1720 GVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1720 ~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
..++|++ +||+|+||||.|+.|++.+.+.
T Consensus 505 ~~V~Fvd--~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 505 GGVVFVD--ELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred CeEEEec--cCCCCCcchHHHHHHHHHHHhc
Confidence 9999999 9999999999999999998654
|
|
| >TIGR02316 propion_prpE propionate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-64 Score=668.65 Aligned_cols=513 Identities=18% Similarity=0.182 Sum_probs=404.1
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
...+++|.++++++|+++|+++.+......+++||+||+++++++|+.|+ +.|+++||+|+++++|+ +++
T Consensus 52 n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~Gd~V~i~~~n~--~e~ 121 (628)
T TIGR02316 52 NLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALR--------ALGVGRGDRVLIYMPMI--AEA 121 (628)
T ss_pred eHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHH
Confidence 45678898888899999999985422112268999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCc---------c----c--ccccceecc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLP---------K----T--AAGEVVAFK 225 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~---------~----~--~~~~~~~~~ 225 (1761)
++++|||+++|++++|+++.++.+ ++.+++++++++++|+++.....-. . . ....++..+
T Consensus 122 v~~~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 196 (628)
T TIGR02316 122 VFAMLACARIGAIHSVVFGGFASH-----SLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVD 196 (628)
T ss_pred HHHHHHHHHhCCEEEecCCCCCHH-----HHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEe
Confidence 999999999999999999999976 8999999999999999865321100 0 0 001111111
Q ss_pred CCC-cc------eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHH-HHHHHHHHcCCCCCCe
Q psy14338 226 GWP-KL------TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLS-HCRALTQACHYTEGEN 297 (1761)
Q Consensus 226 ~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~d~ 297 (1761)
... .. .....+..........+.....+++++||+|||||||+||||+++|++++. ........++++++|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~ 276 (628)
T TIGR02316 197 RGLAPMRLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQV 276 (628)
T ss_pred CCCCCcCcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcE
Confidence 100 00 000000000100111112224679999999999999999999999999754 4455666789999999
Q ss_pred EEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCc
Q psy14338 298 MVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSS 375 (1761)
Q Consensus 298 ~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~ 375 (1761)
+++++|++|+++....++.+|+.|+++++.+......++..+++.|+++++|+++.+| +++..+..... ....++++
T Consensus 277 ~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~l~~ 355 (628)
T TIGR02316 277 MFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAP-TAIRVLKKQDAAWLRKHDLSS 355 (628)
T ss_pred EEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCH-HHHHHHHhcCCcccccCCccc
Confidence 9999999999987546899999999999987433356899999999999999999986 47776665432 23457899
Q ss_pred eeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCC
Q psy14338 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQE 455 (1761)
Q Consensus 376 Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 455 (1761)
||.+++| |+++++++.+++.+.+ |.+ ++|.||+||++...+.....
T Consensus 356 lr~~~~g--Ge~l~~~~~~~~~~~~---~~~---~~~~yG~TE~~~~~~~~~~~-------------------------- 401 (628)
T TIGR02316 356 LHWLFLA--GEPLDEPTAHWITDGL---GKP---VIDNYWQTETGWPVLAIMPG-------------------------- 401 (628)
T ss_pred eeEEEEe--cCCCCHHHHHHHHHHh---CCC---EEecccccccCceeecCCCC--------------------------
Confidence 9999999 9999999999888877 443 99999999997433221100
Q ss_pred CccCcccccccCCCCCCcEEEEEeC-CCCcccCCCCCceEEEEecC---CccccccCCCccccccccccccccCCCccCC
Q psy14338 456 NSLTSLTLQDCGQVMPGCIMTVVKM-DSPSYLCKTDEVGEICVAST---GTGSQYWGLPGLSNTTFKVTPLLADGTALSQ 531 (1761)
Q Consensus 456 ~~~~~~~~~~iG~p~~~~~~~I~d~-~~~~~~~p~G~~GEL~i~G~---~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~ 531 (1761)
........+++|+|++|++++|+|+ +++ ++|.|+.|||+|+|| +++.|||++++.+.+.|... .+
T Consensus 402 ~~~~~~~~gs~G~p~~g~~v~i~d~~~g~--~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~---------~~ 470 (628)
T TIGR02316 402 LDLKPVKLGSPGLPMYGYHLRVLDEATGR--PCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSH---------FK 470 (628)
T ss_pred CCcCCCCCCCcccCcCCceEEEEECCCCC--CCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhc---------CC
Confidence 0000123568999999999999998 565 589999999999998 68899999998777665311 12
Q ss_pred CceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC
Q psy14338 532 DTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP 610 (1761)
Q Consensus 532 ~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~ 610 (1761)
++||+|||+|++|+||+++|+||+|||||++|+||+|.|||++|.+++.| .+|+|+++++. .++.+++|++..+
T Consensus 471 ~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V-----~ea~Vvg~~d~~~g~~~~~~vv~~~ 545 (628)
T TIGR02316 471 RPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSV-----AEVAVVGVHDELKGQVAVVFAILKE 545 (628)
T ss_pred CCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCc-----ceEEEEeeecCCCCeEEEEEEEEcC
Confidence 68999999999999999999999999999999999999999999998888 79999999864 6788999998765
Q ss_pred CC----------CHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 611 DC----------SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 611 ~~----------~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+. ..++|+++++++|+.||+|+.+ +.+++||+|+|||++|++|++.+..
T Consensus 546 ~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v-------~~v~~lP~t~sGKi~r~~L~~~~~~ 604 (628)
T TIGR02316 546 SDSAGDAHDPHAVETGMMDCVVRQLGAVARPARV-------YFVAALPKTRSGKLLRRSIQALAEG 604 (628)
T ss_pred CcccccccchHHHHHHHHHHHHHhcCCCcCCCEE-------EEcCCCCCCCchHHHHHHHHHHHcC
Confidence 42 2468999999999999999986 5569999999999999999998754
|
This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate. |
| >PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-65 Score=661.07 Aligned_cols=494 Identities=17% Similarity=0.208 Sum_probs=396.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.+.|.+.++++|+++|+.+.+. +++||+||.++++++|+.|. . .+||+|+|+++|+ ++
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~~~-----~~~Ty~el~~~~~~lA~~L~--------~---~~gd~Val~~~n~--~e 79 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDEQL-----GKLSYNQVRKAVIALATKVS--------K---YPDQHIGIMMPAS--AG 79 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeCCC-----CcccHHHHHHHHHHHHHHHh--------h---ccCCeEEEEcCCc--hH
Confidence 36799999999999999999875432 37999999999999999998 4 4899999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc------ccceeccCCCc-cee
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA------GEVVAFKGWPK-LTW 232 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~ 232 (1761)
+++++|||+++|+++|||+|.++.+ |+.+++++++++++|++......+..... ..++....... ..+
T Consensus 80 ~~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 154 (539)
T PRK06334 80 AYIAYFATLLSGKIPVMINWSQGLR-----EVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSF 154 (539)
T ss_pred HHHHHHHHHhcCCeeEecCcccchH-----HHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccH
Confidence 9999999999999999999999976 89999999999999998765443322110 01111110000 000
Q ss_pred EEeccc--c---CCCCC----CCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccC
Q psy14338 233 FVTEHL--A---KTPKD----WAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLD 303 (1761)
Q Consensus 233 ~~~~~~--~---~~~~~----~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~ 303 (1761)
.+.. . ..+.. ........++++|||+|||||||+||||+++|+++.+...+....++++++|++++++|
T Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p 232 (539)
T PRK06334 155 --WEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLP 232 (539)
T ss_pred --HHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecc
Confidence 0000 0 00000 00112457899999999999999999999999999998888888889999999999999
Q ss_pred CcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecC
Q psy14338 304 FKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGD 383 (1761)
Q Consensus 304 ~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg 383 (1761)
++|.+++...++.++..|+++++... .+++..+++.|+++++|++.++| +++..++........++++||.+++|
T Consensus 233 ~~h~~g~~~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~i~~g- 307 (539)
T PRK06334 233 PFHAYGFNSCTLFPLLSGVPVVFAYN---PLYPKKIVEMIDEAKVTFLGSTP-VFFDYILKTAKKQESCLPSLRFVVIG- 307 (539)
T ss_pred hHhhhhhHHHHHHHHHcCCeEEEecC---CCCHHHHHHHHHHhCCcEEEecH-HHHHHHHHhhhhcccccccccEEEEC-
Confidence 99999987558899999999998763 57899999999999999999996 47777776554445678899999999
Q ss_pred CCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccc
Q psy14338 384 GANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTL 463 (1761)
Q Consensus 384 ~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1761)
|+++++++.++|.+.++. + .++|.||+||++.+++..... .....
T Consensus 308 -G~~l~~~~~~~~~~~~~~--~---~i~~~YG~TE~~~~~~~~~~~-----------------------------~~~~~ 352 (539)
T PRK06334 308 -GDAFKDSLYQEALKTFPH--I---QLRQGYGTTECSPVITINTVN-----------------------------SPKHE 352 (539)
T ss_pred -CccCCHHHHHHHHHHCCC--C---eEEecccccccCceEEeccCC-----------------------------CCCCC
Confidence 999999999999998752 3 499999999998766543311 01124
Q ss_pred cccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEE
Q psy14338 464 QDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFL 543 (1761)
Q Consensus 464 ~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~ 543 (1761)
.++|+|++|++++|+|+++. .++|.|+.|||+|+|+++++||||+|+.++ |... ++++||+|||+|++
T Consensus 353 ~~vG~p~~g~~v~i~d~~~~-~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~--~~~~---------~~~~w~~TGD~g~~ 420 (539)
T PRK06334 353 SCVGMPIRGMDVLIVSEETK-VPVSSGETGLVLTRGTSLFSGYLGEDFGQG--FVEL---------GGETWYVTGDLGYV 420 (539)
T ss_pred CcCceecCCCEEEEEcCCCC-ccCCCCceEEEEEecCcccccccCCccccc--ceee---------CCceeEECCCEEEE
Confidence 57999999999999997644 269999999999999999999999998754 3211 23789999999999
Q ss_pred eCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccce------EEEEEEecCCCceEEEEEEeCCCCCHHHH
Q psy14338 544 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGR------IAVFSIRVLRDERICVIAEQRPDCSEEES 617 (1761)
Q Consensus 544 ~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~------a~v~~~~~~~~~~l~a~v~~~~~~~~~~l 617 (1761)
|+||+|+|+||+||+||++|+||+|.|||++|.++++| .+ ++|++.++. ...+++|++.. .+.+++
T Consensus 421 d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v-----~~~~~~~~~~v~~~~~~-~~~~~~~~~~~--~~~~~~ 492 (539)
T PRK06334 421 DRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQ-----NAADHAGPLVVCGLPGE-KVRLCLFTTFP--TSISEV 492 (539)
T ss_pred CCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCC-----ccccccCceEEEcCCCC-ceEEEEEEecc--CChHHH
Confidence 99999999999999999999999999999999999888 44 667776532 23566666543 467889
Q ss_pred HHHHHHH-HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 618 FQWMSRV-LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 618 ~~~l~~~-Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+++|++. ++.||+|+.+ ..+++||+|+||||||++|++...
T Consensus 493 ~~~l~~~~~~~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~ 534 (539)
T PRK06334 493 NDILKNSKTSSILKISYH-------HQVESIPMLGTGKPDYCSLNALAK 534 (539)
T ss_pred HHHHHhcCCcccccchhe-------eeecccccccCCcccHHHHHHHHH
Confidence 9999986 7999999986 456999999999999999998753
|
|
| >PLN02654 acetate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-64 Score=666.53 Aligned_cols=510 Identities=17% Similarity=0.191 Sum_probs=406.6
Q ss_pred hHHHHHHHHhh-hcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 82 NLEAAIQRYGS-ATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 82 ~l~~~~~~~a~-~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
....+|+++++ .+|+++|+++...++...+++||+||.++++++|+.|+ +.|+++||+|+|+++|+ +++
T Consensus 89 ~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~GdrV~i~~pn~--~e~ 158 (666)
T PLN02654 89 ICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLK--------DVGVKKGDAVVIYLPML--MEL 158 (666)
T ss_pred HHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHH
Confidence 45678887776 48999999875433223368999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc------------------ccce
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA------------------GEVV 222 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~------------------~~~~ 222 (1761)
++++|||+++|++++|+++.++.+ ++.+++++++++++|+++........... ..++
T Consensus 159 v~a~lA~~~~Gav~vpv~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (666)
T PLN02654 159 PIAMLACARIGAVHSVVFAGFSAE-----SLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICL 233 (666)
T ss_pred HHHHHHHHHcCCEEEecCCCCCHH-----HHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEE
Confidence 999999999999999999999977 89999999999999998765332111000 0000
Q ss_pred eccCCC-----ccee------EEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHH-HHHHHHHHc
Q psy14338 223 AFKGWP-----KLTW------FVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLS-HCRALTQAC 290 (1761)
Q Consensus 223 ~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~-~~~~~~~~~ 290 (1761)
...... ...+ ...+.... .....+.....++|++||+|||||||+||||+++|++++. ........+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~ 312 (666)
T PLN02654 234 TYENQLAMKREDTKWQEGRDVWWQDVVPN-YPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF 312 (666)
T ss_pred EecccccccccccccccCCcccHHHHhhc-CCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc
Confidence 000000 0000 00000000 0001112235789999999999999999999999999864 445566778
Q ss_pred CCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--C
Q psy14338 291 HYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--H 368 (1761)
Q Consensus 291 ~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~ 368 (1761)
+++++|++++.+|++|.++....++.+|+.|+++++++.....+++..+++.|++++||++..+| +++..++.... .
T Consensus 313 ~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~ 391 (666)
T PLN02654 313 DYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAP-TLVRSLMRDGDEYV 391 (666)
T ss_pred CCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCH-HHHHHHHhhCcccc
Confidence 99999999999999999987656889999999999997432246899999999999999999986 58777776532 2
Q ss_pred CCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccc
Q psy14338 369 KDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYG 448 (1761)
Q Consensus 369 ~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 448 (1761)
...++++||.+++| ||++++++.++|.+.++...+ .+.+.||+||++...+.....
T Consensus 392 ~~~~l~~Lr~i~~~--Ge~l~~~~~~~~~~~~g~~~~---~i~~~yg~TE~g~~~~~~~~~------------------- 447 (666)
T PLN02654 392 TRHSRKSLRVLGSV--GEPINPSAWRWFFNVVGDSRC---PISDTWWQTETGGFMITPLPG------------------- 447 (666)
T ss_pred ccCChhheeEEEEe--cCCCCHHHHHHHHHHhCCCCC---ceeccccccccCCeeeccCCC-------------------
Confidence 34578899999999 999999999999998842113 399999999997544322100
Q ss_pred eeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEec--CCccccccCCCccccccccccccccCC
Q psy14338 449 VVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADG 526 (1761)
Q Consensus 449 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g 526 (1761)
....+++++|+|++|++++|+|++|+ +++.|+.|||+|+| |++++||||+|+.|.+.|.. +
T Consensus 448 ---------~~~~~~gs~G~p~~g~~v~i~d~~g~--~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~-~----- 510 (666)
T PLN02654 448 ---------AWPQKPGSATFPFFGVQPVIVDEKGK--EIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFK-P----- 510 (666)
T ss_pred ---------CCCCCCCccCCCCCCceEEEECCCCC--CCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhh-c-----
Confidence 00124678999999999999999997 48889999999999 78999999999999887641 1
Q ss_pred CccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEE
Q psy14338 527 TALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVI 605 (1761)
Q Consensus 527 ~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~ 605 (1761)
.+|||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+++.| .+++|+++++. .++.+++|
T Consensus 511 ----~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V-----~eaaVvg~~d~~~ge~~~a~ 581 (666)
T PLN02654 511 ----FAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQC-----AEAAVVGIEHEVKGQGIYAF 581 (666)
T ss_pred ----CCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCe-----eeEEEEeeEcCCCCeEEEEE
Confidence 168999999999999999999999999999999999999999999998888 79999999964 67899999
Q ss_pred EEeCCCC--CH---HHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 606 AEQRPDC--SE---EESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 606 v~~~~~~--~~---~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
|++.++. +. ++++++++++|+.|++|+.| +.+++||+|.|||++|++|++.+.
T Consensus 582 Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i-------~~v~~lP~T~sGKi~r~~l~~~~~ 639 (666)
T PLN02654 582 VTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKI-------HWAPGLPKTRSGKIMRRILRKIAS 639 (666)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEE-------EECCCCCCCCCcCchHHHHHHHHc
Confidence 9987653 22 36888999999999999986 456999999999999999999875
|
|
| >PRK00174 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-64 Score=665.74 Aligned_cols=510 Identities=17% Similarity=0.192 Sum_probs=407.1
Q ss_pred HHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHH
Q psy14338 83 LEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLC 162 (1761)
Q Consensus 83 l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vv 162 (1761)
..++|+++++++|+++|+++.+.++...+++||+||+++++++|+.|+ +.|+++||+|+++++|+ +++++
T Consensus 69 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e~~~ 138 (637)
T PRK00174 69 SYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALK--------SLGVKKGDRVAIYMPMI--PEAAV 138 (637)
T ss_pred HHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHHHH
Confidence 467788888999999999986543223368999999999999999999 89999999999999999 99999
Q ss_pred HHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCc---------c----ccc-ccceeccCCC
Q psy14338 163 AFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLP---------K----TAA-GEVVAFKGWP 228 (1761)
Q Consensus 163 a~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~---------~----~~~-~~~~~~~~~~ 228 (1761)
++|||+++|++++|++|.++.+ ++.+++++++++++|+++....... . ... ..++......
T Consensus 139 ~~lA~~~~Gav~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (637)
T PRK00174 139 AMLACARIGAVHSVVFGGFSAE-----ALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTG 213 (637)
T ss_pred HHHHHHHcCCEEEecCCCCCHH-----HHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCC
Confidence 9999999999999999999977 8999999999999999875432100 0 000 0111111000
Q ss_pred -cc------eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCCeEEE
Q psy14338 229 -KL------TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCR-ALTQACHYTEGENMVC 300 (1761)
Q Consensus 229 -~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~ 300 (1761)
.. .....+.... .....+.....++++|||+|||||||+||||+++|++++.... .....+++.++|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~ 292 (637)
T PRK00174 214 GDVDWVEGRDLWWHELVAG-ASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWC 292 (637)
T ss_pred CCcCcCCCCcccHHHHHhh-cCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEE
Confidence 00 0000111111 1111122345678999999999999999999999999875543 4455678999999999
Q ss_pred ccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeE
Q psy14338 301 VLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRL 378 (1761)
Q Consensus 301 ~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~ 378 (1761)
.+|++|..+....++.+|++|+++++.+......++..+++.|+++++|++.++| +++..++.... ....++++||.
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~~~~lr~ 371 (637)
T PRK00174 293 TADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAP-TAIRALMKEGDEHPKKYDLSSLRL 371 (637)
T ss_pred cCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecH-HHHHHHHhcCCcccccCCccceeE
Confidence 9999999987656899999999999986322245899999999999999999986 57777766432 22346789999
Q ss_pred EEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCcc
Q psy14338 379 LLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSL 458 (1761)
Q Consensus 379 v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (1761)
+++| |+++++++.+.+.+.++..++ .++|.||+||++..++..... .
T Consensus 372 i~~~--Ge~l~~~~~~~~~~~~~~~~~---~i~~~YG~TE~~~~~~~~~~~----------------------------~ 418 (637)
T PRK00174 372 LGSV--GEPINPEAWEWYYKVVGGERC---PIVDTWWQTETGGIMITPLPG----------------------------A 418 (637)
T ss_pred EEEe--CCCCCHHHHHHHHHHhCCCCC---ceEecccccccCCceEecCCC----------------------------C
Confidence 9999 999999999999888743223 399999999998655432210 0
Q ss_pred CcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEec--CCccccccCCCccccccccccccccCCCccCCCceEe
Q psy14338 459 TSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTR 536 (1761)
Q Consensus 459 ~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yr 536 (1761)
...+.+++|+|++|++++|+|++++ ++|.|+.|||+|+| |++++||||+|+.+.+.|.. ..+|||+
T Consensus 419 ~~~~~~~vG~p~~g~~~~i~d~~g~--~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~----------~~~g~~~ 486 (637)
T PRK00174 419 TPLKPGSATRPLPGIQPAVVDEEGN--PLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFS----------TFKGMYF 486 (637)
T ss_pred CCcCCCcccCCCCCceEEEECCCCC--CCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhc----------CCCCEEE
Confidence 0123568999999999999999987 58999999999999 69999999999988777631 1268999
Q ss_pred ecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCC--
Q psy14338 537 SGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCS-- 613 (1761)
Q Consensus 537 TGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~-- 613 (1761)
|||+|++++||+++|+||+||+||++|+||+|.|||++|.+++.| .+|+|++.++. .++.+++|+++.++..
T Consensus 487 TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V-----~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~ 561 (637)
T PRK00174 487 TGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKV-----AEAAVVGRPDDIKGQGIYAFVTLKGGEEPS 561 (637)
T ss_pred CCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCc-----ceEEEEeeEcCCCCeEEEEEEEECCCCCCC
Confidence 999999999999999999999999999999999999999998888 79999999854 6789999999876543
Q ss_pred ---HHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 614 ---EEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 614 ---~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.+++++++++.|+.||+|..+ +.+++||+|+|||++|++|++.+..
T Consensus 562 ~~~~~~l~~~l~~~l~~~~~P~~i-------~~v~~lP~t~~GKi~R~~L~~~~~~ 610 (637)
T PRK00174 562 DELRKELRNWVRKEIGPIAKPDVI-------QFAPGLPKTRSGKIMRRILRKIAEG 610 (637)
T ss_pred HHHHHHHHHHHHhhcCCccCCCEE-------EEcCCCCCCCCcchHHHHHHHHHcC
Confidence 468999999999999999986 5569999999999999999988653
|
|
| >PRK06060 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-64 Score=678.85 Aligned_cols=479 Identities=18% Similarity=0.241 Sum_probs=396.8
Q ss_pred hhHHHHHHHHhhh--cCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCch
Q psy14338 81 RNLEAAIQRYGSA--TYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPI 158 (1761)
Q Consensus 81 ~~l~~~~~~~a~~--~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~ 158 (1761)
.++.++|.+.+.. +||++|+... ..+||+||+++++++|++|+ +.|+++|++|+|+++|+ +
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~-------~~~Ty~eL~~~~~~lA~~L~--------~~g~~~g~~V~i~~~~~--~ 66 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA-------DVVTHGQIHDGAARLGEVLR--------NRGLSSGDRVLLCLPDS--P 66 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec-------CceeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--H
Confidence 3688899988886 7999999752 27999999999999999999 89999999999999999 9
Q ss_pred hHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccc
Q psy14338 159 NFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHL 238 (1761)
Q Consensus 159 ~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (1761)
++++++|||+++|+++||+||.++.+ |+.+++++++++++|++......+... .+..... . ..+..
T Consensus 67 ~~~~~~la~~~aG~~~vpi~p~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~---~~~~~~~-----~-~~~~~ 132 (705)
T PRK06060 67 DLVQLLLACLARGVMAFLANPELHRD-----DHALAARNTEPALVVTSDALRDRFQPS---RVAEAAE-----L-MSEAA 132 (705)
T ss_pred HHHHHHHHHHHhCcEEEecCCCCCHH-----HHHHHHhcCCCcEEEEchHHhhhhccc---ccchhhh-----h-hhhcc
Confidence 99999999999999999999999977 899999999999999987654433211 0000000 0 00000
Q ss_pred cCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH-HHcCCCCCCeEEEccCCcchhhhHHHHHHH
Q psy14338 239 AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT-QACHYTEGENMVCVLDFKRETGLWHSVLTS 317 (1761)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~ 317 (1761)
...+ .......++++|||+|||||||+||||+++|+++.+.+.++. ..++++++|++++.+|++|+.++...++.+
T Consensus 133 ~~~~---~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 209 (705)
T PRK06060 133 RVAP---GGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFP 209 (705)
T ss_pred ccCC---CCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHH
Confidence 0000 111234678999999999999999999999999998887664 468899999999999999999876568999
Q ss_pred HhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHH
Q psy14338 318 VLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFL 397 (1761)
Q Consensus 318 L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~ 397 (1761)
|..|+++++.+. .+++..+.+.+.++++|+++++| +++..++.... ..++++||.+++| ||++++++.++|.
T Consensus 210 l~~G~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P-~~l~~l~~~~~--~~~~~slr~i~~g--Ge~l~~~~~~~~~ 281 (705)
T PRK06060 210 LATGGSAVINSA---PVTPEAAAILSARFGPSVLYGVP-NFFARVIDSCS--PDSFRSLRCVVSA--GEALELGLAERLM 281 (705)
T ss_pred HhcCCEEEEeCC---CCCHHHHHHHHHhcCCeEEeeHH-HHHHHHHHhcc--cccccceeEEEEe--cCcCCHHHHHHHH
Confidence 999999999874 56889999999999999999996 47777665432 3457899999999 9999999999999
Q ss_pred HHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEE
Q psy14338 398 SVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTV 477 (1761)
Q Consensus 398 ~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I 477 (1761)
+.++. . .++|.||+||++.++...... ....+++|+|+++++++|
T Consensus 282 ~~~~~--~---~~~~~YG~tE~~~~~~~~~~~------------------------------~~~~~~iG~p~~~~~v~i 326 (705)
T PRK06060 282 EFFGG--I---PILDGIGSTEVGQTFVSNRVD------------------------------EWRLGTLGRVLPPYEIRV 326 (705)
T ss_pred HHcCC--C---ceEeeeeccccCceEEeccCC------------------------------CCCcCcccccCCCcEEEE
Confidence 98852 3 499999999998654432210 123568999999999999
Q ss_pred EeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCC
Q psy14338 478 VKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDG 557 (1761)
Q Consensus 478 ~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~ 557 (1761)
+|++++ ++|.|+.|||||+|+++++||||+|+.+. ..++||+|||+|++++||+++|+||+||
T Consensus 327 ~d~~g~--~~~~g~~GEl~i~g~~v~~GY~~~~~~~~---------------~~~~~~~TGDl~~~~~dG~l~~~GR~dd 389 (705)
T PRK06060 327 VAPDGT--TAGPGVEGDLWVRGPAIAKGYWNRPDSPV---------------ANEGWLDTRDRVCIDSDGWVTYRCRADD 389 (705)
T ss_pred ECCCCC--CCCCCCceEEEEccchhhhhhhCCCcccc---------------cCCCcEECCeeEEECCCceEEEecccCc
Confidence 999987 59999999999999999999999998652 1278999999999999999999999999
Q ss_pred eEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CC---HHHHHHHHHHHHHHhhhc
Q psy14338 558 LMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CS---EEESFQWMSRVLQAVDSI 631 (1761)
Q Consensus 558 qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~---~~~l~~~l~~~Lp~y~~P 631 (1761)
|||++|+||+|.|||+.|.+++.| .+++|++.++. .++.+++|++...+ .+ .++++++|+++||.||+|
T Consensus 390 ~ik~~G~~v~~~eIE~~l~~~~~V-----~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P 464 (705)
T PRK06060 390 TEVIGGVNVDPREVERLIIEDEAV-----AEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVP 464 (705)
T ss_pred eEEECCEEECHHHHHHHHHhCCCe-----eEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCC
Confidence 999999999999999999998888 79999998854 56789999987654 23 247888999999999999
Q ss_pred ceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 632 HQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 632 ~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
..+ +.+++||+|+|||+||++|++.+.
T Consensus 465 ~~i-------~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 465 HRF-------AVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred cEE-------EEeecCCCCcchhhHHHHHHhhcc
Confidence 986 556999999999999999998653
|
|
| >COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-64 Score=613.94 Aligned_cols=476 Identities=21% Similarity=0.233 Sum_probs=390.2
Q ss_pred CCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCC
Q psy14338 1182 PVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQN 1261 (1761)
Q Consensus 1182 P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~ 1261 (1761)
+|+.|+++.+.....+++||+||.+.++++|+.|++..|+ +||||+|++|+.+|.+++||||+|+||+++|+-+.
T Consensus 24 ~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~~~vf~~---- 98 (528)
T COG0365 24 PDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPAVVSPG---- 98 (528)
T ss_pred CCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEEeecccC----
Confidence 7899999765544558999999999999999999976478 99999999999999999999999999999999664
Q ss_pred ccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc--------cccc----ccCCccccCCCCccchhhhccCCCCCC
Q psy14338 1262 LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN--------VVDI----KSWPTILDTDDMPKKKLAALYRAPTAE 1329 (1761)
Q Consensus 1262 ~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1329 (1761)
++++.+++.+++++++++|+.+......+...... ++.. ..+.+... ...........+++
T Consensus 99 --f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~-----~~~~~~~~~~~~~~ 171 (528)
T COG0365 99 --LSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVE-----KASEKFEFEPLPAD 171 (528)
T ss_pred --CCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhh-----ccCCCCCccccCCC
Confidence 45559999999999999999876544332211100 0000 01111111 01111122347889
Q ss_pred CEEEEEeccCCCCCCceEEccHHHHHHHHH-HHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccc
Q psy14338 1330 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCR-SMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 1408 (1761)
Q Consensus 1330 ~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~ 1408 (1761)
|++||+|||||||+||||+++|+++..... .....+.+.++|+++....+.|..|..+.++.+|++|+++++.+.....
T Consensus 172 dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~ 251 (528)
T COG0365 172 DPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFY 251 (528)
T ss_pred CeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCC
Confidence 999999999999999999999997666554 4455778888889998889999999987899999999999999865333
Q ss_pred cCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCc
Q psy14338 1409 VNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPR 1488 (1761)
Q Consensus 1409 ~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~ 1488 (1761)
+++.+++.|++++||.++..|+.+++|.+.- ....+++++||.+.+.||||++ +.++++.+.+. +
T Consensus 252 -~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g-------~~~~~dlssLr~~~SaGEPLnp-e~~~w~~~~~g------~ 316 (528)
T COG0365 252 -SPERLWEALEKYKVTIFGTSPTFLRRLMKLG-------LGEPYDLSSLRVLGSAGEPLNP-EAFEWFYSALG------V 316 (528)
T ss_pred -CHHHHHHHHHHhCCceEeeCHHHHHHHHhcC-------CcccccchhheeeeccCCCCCH-HHHHHHHHHhC------C
Confidence 5999999999999999999999999998731 1467899999999999999999 78888877764 7
Q ss_pred cccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcc
Q psy14338 1489 AVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHL 1568 (1761)
Q Consensus 1489 ~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~ 1568 (1761)
.|.+.||+||++.....+.. ..+.++.|+|+||.++.|+|++ ++++|+|+
T Consensus 317 ~i~d~~gqTEtg~~~~~~~~----------------------------~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~- 366 (528)
T COG0365 317 WILDIYGQTETGMGFIAGRP----------------------------PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV- 366 (528)
T ss_pred CEeccccccccCccccCCCC----------------------------CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-
Confidence 89999999998732221110 0112336999999999999987 99999999
Q ss_pred eEEEEcCC--cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEc
Q psy14338 1569 GEIWVQSP--HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVG 1646 (1761)
Q Consensus 1569 GEL~i~g~--~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~G 1646 (1761)
|+|.|+.+ ++++|||| +|+.+.+.|. ++||.|||.+++ |+| |+ ++|+|
T Consensus 367 G~Lvi~~~~p~~~~~~w~---d~er~~~~y~---------~~~y~tGD~~~~------Ded--------Gy----~~i~G 416 (528)
T COG0365 367 GELVVRLPWPGMALTYWN---DPERYKEAYF---------GRWYRTGDWAER------DED--------GY----FWLHG 416 (528)
T ss_pred eEEEEeCCCchhhhhhhC---CHHHHHHHHh---------hceeecCceeEE------ccC--------CC----EEEEe
Confidence 99999987 99999999 9999998883 239999999999 999 99 99999
Q ss_pred ccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc---hhHhhHHHHHHHHHhhhcCce
Q psy14338 1647 ALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE---SEALDLVPLVTNAVLEEHHLI 1718 (1761)
Q Consensus 1647 R~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~---~~~~~l~~~l~~~~Lp~~~~v 1718 (1761)
|.||+||+.|+||.+.|||+ +|.+||+|.||+||+. |+.+++||+++... ...++|++++++. +. .++.
T Consensus 417 R~DDvI~vsG~Rig~~EvE~-~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~~L~~ei~~~vr~~-~~-~~~~ 493 (528)
T COG0365 417 RSDDVIKVSGKRIGPLEIES-VLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPNELAEEIRRHVARN-IG-PHAI 493 (528)
T ss_pred eccceEeccCeeccHHHHHH-HHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChHHHHHHHHHHHHhc-cC-cccC
Confidence 99999999999999999999 8999999999999986 44789999985322 3456777788776 55 4899
Q ss_pred eeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1719 VGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1719 P~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
|+.|.+++ +||+|.||||.|+.|++.+.+
T Consensus 494 p~~i~fv~--~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 494 PRKIRFVD--ELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred CceEEEec--CCCCCCcccHHHHHHHHHHhh
Confidence 99999999 999999999999999998864
|
|
| >PRK07788 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-64 Score=656.42 Aligned_cols=486 Identities=17% Similarity=0.183 Sum_probs=404.2
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|+++++++||++|+++.+ +++||+||.++++++|+.|+ +.|+++|++|+++++|+ +++
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~------~~~Ty~el~~~~~~la~~L~--------~~gi~~gd~V~i~~~n~--~~~ 112 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDER------GTLTYAELDEQSNALARGLL--------ALGVRAGDGVAVLARNH--RGF 112 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECC------CceeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHH
Confidence 378999999999999999998754 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----cceec-cCC-C--ccee
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----EVVAF-KGW-P--KLTW 232 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~-~~~-~--~~~~ 232 (1761)
++++|||+++|+++||+++.++.+ ++.+++++++++++|+++.....+...... ..+.. ... . ...+
T Consensus 113 ~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (549)
T PRK07788 113 VLALYAAGKVGARIILLNTGFSGP-----QLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTD 187 (549)
T ss_pred HHHHHHHHhcCCEEEEeCCCCCHH-----HHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCc
Confidence 999999999999999999999976 899999999999999998755443221100 00000 000 0 0000
Q ss_pred EEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHH
Q psy14338 233 FVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312 (1761)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 312 (1761)
...+.+..... .......+++.+||+|||||||+||||+++|+++.+.+.+....+++.++++++..+|++|..++..
T Consensus 188 ~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 265 (549)
T PRK07788 188 ETLDDLIAGSS--TAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAH 265 (549)
T ss_pred ccHHHHhcCCC--CCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHH
Confidence 00011111000 1111234678899999999999999999999999999888888899999999999999999999884
Q ss_pred HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCC--CCCCCCceeEEEecCCCccCCH
Q psy14338 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDH--KDISLSSLRLLLVGDGANPWSL 390 (1761)
Q Consensus 313 ~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~--~~~~l~~Lr~v~~gg~Ge~l~~ 390 (1761)
++.++..|+++++.+ .+++..+++.++++++|++.++| +++..++..... ...++++||.+++| |+++++
T Consensus 266 -~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~~~~lr~i~~g--G~~l~~ 337 (549)
T PRK07788 266 -LTLAMALGSTVVLRR----RFDPEATLEDIAKHKATALVVVP-VMLSRILDLGPEVLAKYDTSSLKIIFVS--GSALSP 337 (549)
T ss_pred -HHHHHHhCCEEEECC----CCCHHHHHHHHHHhCCcEEEEHH-HHHHHHHhCcccccCCCCCCceeEEEEe--CCCCCH
Confidence 889999999999986 78999999999999999999996 478777765433 44568899999999 999999
Q ss_pred HHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC
Q psy14338 391 SSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM 470 (1761)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 470 (1761)
++.++|.+.+ |.+ ++|.||+||++.+++..+.+ ....+.++|+|+
T Consensus 338 ~~~~~~~~~~---~~~---l~~~YG~TE~~~~~~~~~~~-----------------------------~~~~~~~vG~~~ 382 (549)
T PRK07788 338 ELATRALEAF---GPV---LYNLYGSTEVAFATIATPED-----------------------------LAEAPGTVGRPP 382 (549)
T ss_pred HHHHHHHHHh---Ccc---ceeccCcchhchhhccChhh-----------------------------hhhcCCCcccCC
Confidence 9999999988 433 99999999998655432211 012356899999
Q ss_pred CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEE
Q psy14338 471 PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVF 550 (1761)
Q Consensus 471 ~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~ 550 (1761)
+|++++|+|++++ ++|.|+.|||+|+|++++.||+++++. + + .++||+|||+|++++||+++
T Consensus 383 ~~~~~~i~d~~~~--~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~-------------~~g~~~TGDl~~~~~~g~l~ 444 (549)
T PRK07788 383 KGVTVKILDENGN--EVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I-------------IDGLLSSGDVGYFDEDGLLF 444 (549)
T ss_pred CCcEEEEECCCcC--CCCCCCeEEEEEeCCCccccccCCCcc--c-c-------------cCCceecCceEEEcCCCCEE
Confidence 9999999999987 589999999999999999999998875 1 2 16899999999999999999
Q ss_pred EEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHHH
Q psy14338 551 VCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQA 627 (1761)
Q Consensus 551 ~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~ 627 (1761)
|+||+||+||++|+||+|.|||+.|.+++.| .+++|++.++ ..++.++++++..++ .+.++++++++++||.
T Consensus 445 ~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V-----~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~l~~ 519 (549)
T PRK07788 445 VDGRDDDMIVSGGENVFPAEVEDLLAGHPDV-----VEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIKDYVRDNLAR 519 (549)
T ss_pred EeccCcceEEECCEEECHHHHHHHHHhCCCe-----eEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHHHHHHHhhhc
Confidence 9999999999999999999999999998888 7999999885 467889999987654 6788999999999999
Q ss_pred hhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 628 VDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 628 y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
||+|..+ +.+++||+|+|||+||++|++
T Consensus 520 ~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~ 547 (549)
T PRK07788 520 YKVPRDV-------VFLDELPRNPTGKVLKRELRE 547 (549)
T ss_pred CCCCcEE-------EEeCCCCCCCCcCEeHHHhhc
Confidence 9999986 456999999999999999975
|
|
| >PLN02860 o-succinylbenzoate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-64 Score=655.10 Aligned_cols=514 Identities=16% Similarity=0.177 Sum_probs=403.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+-++.++|+++++++|+++|+++.+ +++||+||+++++++|+.|. +.|+++||+|+|+++|+ ++
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~--------~~Gv~~gd~V~v~~~n~--~~ 69 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTISGN------RRRTGHEFVDGVLSLAAGLL--------RLGLRNGDVVAIAALNS--DL 69 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEecCC------ceeeHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCC--HH
Confidence 4689999999999999999998644 58999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccc-----cccc-ceeccCCCc----
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKT-----AAGE-VVAFKGWPK---- 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~~~-~~~~~~~~~---- 229 (1761)
+++++|||+++|++++||+|.++.+ ++.+++++++++++++++......... .... .+.......
T Consensus 70 ~~~~~la~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 144 (563)
T PLN02860 70 YLEWLLAVACAGGIVAPLNYRWSFE-----EAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFI 144 (563)
T ss_pred HHHHHHHHhhccEEEEeCCcccCHH-----HHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCccccccc
Confidence 9999999999999999999999876 899999999999999987542211111 0000 011000000
Q ss_pred --ceeEEeccccCCC-CCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcc
Q psy14338 230 --LTWFVTEHLAKTP-KDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKR 306 (1761)
Q Consensus 230 --~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 306 (1761)
..+...+...... ..........+++++||+|||||||+||||+++|++++.........++++++|+++.++|++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 224 (563)
T PLN02860 145 FLNSFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 224 (563)
T ss_pred chhhccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchh
Confidence 0000000000000 0001112346799999999999999999999999999988777777889999999999999999
Q ss_pred hhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCC--CCCCCCceeEEEecCC
Q psy14338 307 ETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDH--KDISLSSLRLLLVGDG 384 (1761)
Q Consensus 307 ~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~--~~~~l~~Lr~v~~gg~ 384 (1761)
+.++.. ++.+|..|+++++.+ .+++..+++.|+++++|++.++| +++..++..... ....+++||.+++|
T Consensus 225 ~~g~~~-~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~~~~lr~~~~g-- 296 (563)
T PLN02860 225 IGGLSS-ALAMLMVGACHVLLP----KFDAKAALQAIKQHNVTSMITVP-AMMADLISLTRKSMTWKVFPSVRKILNG-- 296 (563)
T ss_pred hccHHH-HHHHHHcCceEEecC----CCCHHHHHHHHHHhCCeeEEeCh-HHHHHHHHhhhhhhccccccceeEEEeC--
Confidence 999985 899999999999987 68999999999999999999997 477777654321 22457899999999
Q ss_pred CccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecC--CCccCccc
Q psy14338 385 ANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQ--ENSLTSLT 462 (1761)
Q Consensus 385 Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~ 462 (1761)
|+++++++.++|.+.++ |. .++|.||+||++..++............ ......+.. ........
T Consensus 297 G~~l~~~~~~~~~~~~~--~~---~~~~~YG~TE~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 362 (563)
T PLN02860 297 GGSLSSRLLPDAKKLFP--NA---KLFSAYGMTEACSSLTFMTLHDPTLESP---------KQTLQTVNQTKSSSVHQPQ 362 (563)
T ss_pred CCcCCHHHHHHHHHhcC--CC---ceecCCCccccCcccccccccccccccc---------hhhhhhhcccccccccccC
Confidence 99999999999999885 33 3999999999875443221100000000 000000000 00001112
Q ss_pred ccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEE
Q psy14338 463 LQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGF 542 (1761)
Q Consensus 463 ~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~ 542 (1761)
..++|+|+++++++|+|++ .|++|||+|+|++++.|||++|+.|++.|. .+|||+|||+|+
T Consensus 363 ~~~vG~p~~~~~v~i~~~~-------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~------------~~g~~~TGDl~~ 423 (563)
T PLN02860 363 GVCVGKPAPHVELKIGLDE-------SSRVGRILTRGPHVMLGYWGQNSETASVLS------------NDGWLDTGDIGW 423 (563)
T ss_pred CcccCCccCCcEEEEecCC-------CCceeEEEEecCcccccccCCccccchhcc------------CCCeEEccceEE
Confidence 3479999999999999865 488999999999999999999999999883 378999999999
Q ss_pred EeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC----------
Q psy14338 543 LGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD---------- 611 (1761)
Q Consensus 543 ~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~---------- 611 (1761)
+++||+++|+||+||+||++|+||+|.|||+.+.+++.| .+++|++.++. .++.++++++..++
T Consensus 424 ~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V-----~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~ 498 (563)
T PLN02860 424 IDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGV-----ASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKEN 498 (563)
T ss_pred EcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCc-----ceeEEEEEecCcCCceEEEEEEECCccccccccchh
Confidence 999999999999999999999999999999999998888 79999999854 67889999987653
Q ss_pred ------CCHHHHHHHHHH-HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 612 ------CSEEESFQWMSR-VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 612 ------~~~~~l~~~l~~-~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.+.+++++++++ .|+.||+|..+ ++..++||+|++|||+|++|++++.+
T Consensus 499 ~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~------~~~~~~lP~t~~GKi~r~~L~~~~~~ 554 (563)
T PLN02860 499 AKKNLTLSSETLRHHCREKNLSRFKIPKLF------VQWRKPFPLTTTGKIRRDEVRREVLS 554 (563)
T ss_pred hcccccccHHHHHHHHhhCcccccccceEE------EEEecCCCCCcccchhHHHHHHHHHH
Confidence 456789999998 59999999986 22347899999999999999998753
|
|
| >COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=643.41 Aligned_cols=496 Identities=23% Similarity=0.351 Sum_probs=404.0
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++...+.+.+. ++|+++|+.+.+... ++||+||+++++++|+.|++. |+++||+|+|+++|+++++++++|
T Consensus 12 ~~~~~l~~~a~-----~~~~~~a~~~~~~~~---~~Ty~el~~~~~~~A~~L~~~-~v~~gdrVail~~N~~e~~~~~~a 82 (534)
T COG0318 12 TLASLLERAAR-----RNPDRPALIFLGRGG---RLTYRELDRRANRLAAALQAL-GVKPGDRVAILLPNSPEFLIAFLA 82 (534)
T ss_pred cHHHHHHHHHH-----hCCCceEEEEcCCCc---eeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHH
Confidence 34444444443 779999999533211 499999999999999999999 899999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc----ccccccCCccc---cCCCC-c
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN----VVDIKSWPTIL---DTDDM-P 1315 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~-~ 1315 (1761)
|+++|++++||+|.+.. .++.++++++++++++++.............. .+......... ..... .
T Consensus 83 ~~~~Gav~vpln~~~~~------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (534)
T COG0318 83 ALRAGAVAVPLNPRLTP------RELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAA 156 (534)
T ss_pred HHhcCEEEeecCcccCH------HHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhh
Confidence 99999999999886644 49999999999999999987444333322111 00000000000 00000 0
Q ss_pred cc-hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC--cCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1316 KK-KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE--LYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1316 ~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
.. .........+++++|+|+|||||||.||||++||+|++.+.......++ ++++|+++.++|++|.+|+...++.+
T Consensus 157 ~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~ 236 (534)
T COG0318 157 EGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAP 236 (534)
T ss_pred ccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHH
Confidence 00 0000111257899999999999999999999999999999999999998 89999999999999999997777777
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCc-ceEEEeecCCCChHH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGC-VRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~-Lr~v~~gGe~l~~~~ 1471 (1761)
++.|+++++.++. .+++..++..+.++++|+++++|+++..+++.. .....++.+ ||.++.||+++++ .
T Consensus 237 ~~~G~~~v~~~~~--~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~-------~~~~~~~~~~lr~~~~gg~~~~~-~ 306 (534)
T COG0318 237 LLGGGTLVLLSPE--PFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNP-------EKDDDDLSSSLRLVLSGGAPLPP-E 306 (534)
T ss_pred HHcCCEEEeCCCC--CcCHHHHHHHHHHhcceEEecchHHHHHHHhCC-------ccCccccccceEEEEecCCcCCH-H
Confidence 9999999998742 389999999999999999999999999987742 223344444 9999999999999 8
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+.|+. ..+.+.||+||++..++.+.... . ..+..++|+|++|++
T Consensus 307 ~~~~~~~~~~~-----~~i~~~YG~TE~~~~~~~~~~~~-~------------------------~~~~~~~G~~~pg~~ 356 (534)
T COG0318 307 LLERFEERFGP-----IAILEGYGLTETSPVVTINPPDD-L------------------------LAKPGSVGRPLPGVE 356 (534)
T ss_pred HHHHHHHHhCC-----CceEEeecccccCceeecCCCch-h------------------------hhcCCcccccCCCcE
Confidence 88999888753 37999999999876554433211 0 011234799999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPV 1631 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~ 1631 (1761)
++|+|+++++++| |.+|||+|+||+++.|||| +|+.|++.|. ++|||+|||+|++ |+|
T Consensus 357 v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~---~pe~t~~~f~--------~~gW~~TGDlg~~------d~~---- 414 (534)
T COG0318 357 VRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWN---RPEATAEAFD--------EDGWLRTGDLGYV------DED---- 414 (534)
T ss_pred EEEEeCCCCccCC-CCceEEEEECchhhhhhcC---ChHHHHHhhc--------cCCeeeecceEEE------cCC----
Confidence 9999988666777 9999999999999999999 9999999882 3699999999999 999
Q ss_pred CCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEe-----eCCeEEEEEEeCCC---chhHhhH
Q psy14338 1632 PPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFT-----WTNLLVVVVELDGN---ESEALDL 1703 (1761)
Q Consensus 1632 ~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~-----~~~~~~a~v~~~~~---~~~~~~l 1703 (1761)
|+ ++|+||+||+||++|++|+|.|||. ++.+||.|.+|+|++ +|+.++|+|+.... ..+.+++
T Consensus 415 ----G~----l~i~gR~kd~I~~gG~ni~p~eiE~-~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i 485 (534)
T COG0318 415 ----GY----LYIVGRLKDLIISGGENIYPEEIEA-VLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAELTAEEL 485 (534)
T ss_pred ----cc----EEEEeccceEEEeCCeEECHHHHHH-HHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCCCCCHHHH
Confidence 99 9999999999999999999999999 999999999999997 46689999998643 3378899
Q ss_pred HHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1704 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1704 ~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+++|+.+ |+ .|++|+.+++++ +||+|++||++|+.|++.+..
T Consensus 486 ~~~~~~~-l~-~~~~P~~v~~v~--~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 486 RAFLRKR-LA-LYKVPRIVVFVD--ELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred HHHHHhh-hh-cccCCeEEEEeC--CCCCCCchhhhHHHHHHHHHh
Confidence 9999996 88 999999999999 999999999999999999866
|
|
| >TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-63 Score=658.80 Aligned_cols=512 Identities=17% Similarity=0.187 Sum_probs=408.7
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
...+++|+++++++|+++|+++.+.++...+.+||+||.++++++|+.|+ +.|+++||+|+++++|+ +++
T Consensus 57 n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e~ 126 (625)
T TIGR02188 57 NVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLK--------SLGVKKGDRVAIYMPMI--PEA 126 (625)
T ss_pred EHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHH
Confidence 35678888899999999999986542222368999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCc-------------ccc--cccceecc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLP-------------KTA--AGEVVAFK 225 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~-------------~~~--~~~~~~~~ 225 (1761)
++++|||+++|++++|++|.++.+ ++.+++++++++++|+++.....-. ... ...++...
T Consensus 127 ~~~~lA~~~~Gav~v~i~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (625)
T TIGR02188 127 AIAMLACARIGAIHSVVFGGFSAE-----ALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVR 201 (625)
T ss_pred HHHHHHHHHhCCEEeccCCCCCHH-----HHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEc
Confidence 999999999999999999999977 8999999999999999876432100 000 00011111
Q ss_pred CCC-ccee------EEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCCe
Q psy14338 226 GWP-KLTW------FVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCR-ALTQACHYTEGEN 297 (1761)
Q Consensus 226 ~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~ 297 (1761)
... ...+ ...+.... ...........+++++||+|||||||+||||+++|++++.... .....+++.++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~ 280 (625)
T TIGR02188 202 RTGNPVPWVEGRDVWWHDLMAK-ASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDI 280 (625)
T ss_pred CCCCCcCccccccccHHHHHhh-cCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcE
Confidence 000 0000 00011111 1111122345789999999999999999999999999865443 4455678999999
Q ss_pred EEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCc
Q psy14338 298 MVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSS 375 (1761)
Q Consensus 298 ~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~ 375 (1761)
+++.+|++|..+....++.+|+.|+++++.+......++..+++.|+++++|++.++| +++..++.... ....++++
T Consensus 281 ~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~l~~ 359 (625)
T TIGR02188 281 FWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAP-TAIRALMRLGDEWVKKHDLSS 359 (625)
T ss_pred EEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCH-HHHHHHHhcCCcccccCCccc
Confidence 9999999999886545899999999999986322245899999999999999999996 57777765432 22356889
Q ss_pred eeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCC
Q psy14338 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQE 455 (1761)
Q Consensus 376 Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 455 (1761)
||.+++| |+++++++.+.+.+.++..++ .++|.||+||++..++.....
T Consensus 360 lr~i~~~--G~~l~~~~~~~~~~~~~~~~~---~i~~~yG~TE~~~~~~~~~~~-------------------------- 408 (625)
T TIGR02188 360 LRLLGSV--GEPINPEAWMWYYKVVGKERC---PIVDTWWQTETGGIMITPLPG-------------------------- 408 (625)
T ss_pred eeEEEEe--cCCCCHHHHHHHHHHcCCCCC---ceEecccccccCCceeecCCC--------------------------
Confidence 9999999 999999999999988853334 399999999998654432110
Q ss_pred CccCcccccccCCCCCCcEEEEEeCCCCcccCC-CCCceEEEEec--CCccccccCCCccccccccccccccCCCccCCC
Q psy14338 456 NSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCK-TDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQD 532 (1761)
Q Consensus 456 ~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p-~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~ 532 (1761)
....+++++|+|++|++++|+|++|+ +++ .|+.|||+|+| |++++|||++|+.+.+.|.. ..+
T Consensus 409 --~~~~~~~~~G~p~~g~~~~i~d~~g~--~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~----------~~~ 474 (625)
T TIGR02188 409 --ATPTKPGSATLPFFGIEPAVVDEEGN--PVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFS----------PFP 474 (625)
T ss_pred --CCCcCCCcccCCcCCceEEEECCCCC--CCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhc----------cCC
Confidence 00124578999999999999998887 488 99999999999 68999999999988887742 126
Q ss_pred ceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC
Q psy14338 533 TYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD 611 (1761)
Q Consensus 533 ~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~ 611 (1761)
+||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++. .++.+++|++..++
T Consensus 475 g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V-----~e~~vvg~~~~~~g~~~~a~vv~~~~ 549 (625)
T TIGR02188 475 GYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAV-----AEAAVVGIPDDIKGQAIYAFVTLKDG 549 (625)
T ss_pred CEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCc-----ceEEEEeeEcCCCCeEEEEEEEeCCC
Confidence 7999999999999999999999999999999999999999999998888 79999999854 67899999998765
Q ss_pred CC-----HHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 612 CS-----EEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 612 ~~-----~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.. .++++++++++|+.||+|+.| +.+++||+|+|||++|+.|++.+..
T Consensus 550 ~~~~~~~~~~l~~~~~~~l~~~~~P~~i-------~~v~~lP~t~sGKi~r~~l~~~~~~ 602 (625)
T TIGR02188 550 YEPDDELRKELRKHVRKEIGPIAKPDKI-------RFVPGLPKTRSGKIMRRLLRKIAAG 602 (625)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCccCcEE-------EECCCCCCCCCccchHHHHHHHHcC
Confidence 32 367999999999999999986 5569999999999999999998653
|
This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501. |
| >PTZ00237 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-63 Score=655.02 Aligned_cols=507 Identities=14% Similarity=0.116 Sum_probs=397.9
Q ss_pred hhHHHHHHHHhhh--cCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCch
Q psy14338 81 RNLEAAIQRYGSA--TYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPI 158 (1761)
Q Consensus 81 ~~l~~~~~~~a~~--~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~ 158 (1761)
.+..+++++++.. +|+++|+++...++...+++||+||.++++++|+.|+ +.|+++||+|+++++|+ +
T Consensus 59 n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~GDrV~i~~~n~--~ 128 (647)
T PTZ00237 59 NTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLL--------NLNISKNDNVLIYMANT--L 128 (647)
T ss_pred eHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--H
Confidence 4567888888764 7999999886443322368999999999999999999 88999999999999999 9
Q ss_pred hHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc---------Cccc------cccccee
Q psy14338 159 NFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG---------LPKT------AAGEVVA 223 (1761)
Q Consensus 159 ~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~---------~~~~------~~~~~~~ 223 (1761)
++++++|||+++|++++|+++.++.+ ++.+++++++++++|+++..... +... ....++.
T Consensus 129 e~~~~~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 203 (647)
T PTZ00237 129 EPLIAMLSCARIGATHCVLFDGYSVK-----SLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVIT 203 (647)
T ss_pred HHHHHHHHHHHhCcEEEeeCCCCCHH-----HHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEE
Confidence 99999999999999999999999977 89999999999999997632110 0000 0001111
Q ss_pred ccCCC--------------cc-e-eEEeccccC----CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHH-HHHH
Q psy14338 224 FKGWP--------------KL-T-WFVTEHLAK----TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAA-MLSH 282 (1761)
Q Consensus 224 ~~~~~--------------~~-~-~~~~~~~~~----~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~-l~~~ 282 (1761)
..... .. . ....+.+.. ............++|++||+|||||||+||||+++|++ +.+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~ 283 (647)
T PTZ00237 204 LFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGL 283 (647)
T ss_pred EEcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHH
Confidence 10000 00 0 000000000 00000112345789999999999999999999999998 5544
Q ss_pred HHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccc--cCCHHHHHHHHHhcCceEEEecCHHHHH
Q psy14338 283 CRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALM--KVNPASWMQMITKYRASVAVVKSRDLHW 360 (1761)
Q Consensus 283 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~--~~~~~~l~~~i~~~~vt~~~~~p~~~~~ 360 (1761)
.......+....++++++.+|++|..+.. .++.+|+.|+++++.+...+ .+.+..+++.|++++||++..+| +++.
T Consensus 284 ~~~~~~~~~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P-~~~~ 361 (647)
T PTZ00237 284 KYYWRSIIEKDIPTVVFSHSSIGWVSFHG-FLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLP-KTIR 361 (647)
T ss_pred HHHHHHhcCCCCCcEEEEcCCCceEeeHH-HHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCH-HHHH
Confidence 44445556778899999999999998766 48999999999999874211 12278899999999999999986 5777
Q ss_pred HhhcCCC-----CCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccC
Q psy14338 361 GLLATKD-----HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNAT 435 (1761)
Q Consensus 361 ~ll~~~~-----~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 435 (1761)
.++.... ....++++||.+++| |+++++++.++|.+.+ |++ ++|.||+||++..++.....
T Consensus 362 ~l~~~~~~~~~~~~~~~l~~Lr~i~~~--G~~l~~~~~~~~~~~~---g~~---i~~~yG~TE~~~~~~~~~~~------ 427 (647)
T PTZ00237 362 YLIKTDPEATIIRSKYDLSNLKEIWCG--GEVIEESIPEYIENKL---KIK---SSRGYGQTEIGITYLYCYGH------ 427 (647)
T ss_pred HHHhhCccccccccccCcchheEEEec--CccCCHHHHHHHHHhc---CCC---EEeeechHHhChhhhccCCC------
Confidence 7765321 134568999999999 9999999999999887 554 99999999998544322100
Q ss_pred CCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecC---CccccccCCCcc
Q psy14338 436 GRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAST---GTGSQYWGLPGL 512 (1761)
Q Consensus 436 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~---~l~~GY~~~p~~ 512 (1761)
.....+++|+|++|++++|+|++|+ ++|.|+.|||+|+|| +++.||||+|+.
T Consensus 428 -----------------------~~~~~~s~G~p~~g~~~~i~d~~g~--~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~ 482 (647)
T PTZ00237 428 -----------------------INIPYNATGVPSIFIKPSILSEDGK--ELNVNEIGEVAFKLPMPPSFATTFYKNDEK 482 (647)
T ss_pred -----------------------CCCCCCCCccCcCCceEEEECCCCC--CCCCCCceEEEEeccCCchhhCceeCCHHH
Confidence 0112468999999999999999887 589999999999986 899999999999
Q ss_pred ccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEE
Q psy14338 513 SNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVF 592 (1761)
Q Consensus 513 T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~ 592 (1761)
|++.|.. .+|||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+++.| .+|+|+
T Consensus 483 ~~~~f~~-----------~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V-----~eaavv 546 (647)
T PTZ00237 483 FKQLFSK-----------FPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLV-----LECCSI 546 (647)
T ss_pred HHHHHhC-----------CCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCc-----eeeEEE
Confidence 9987731 268999999999999999999999999999999999999999999998888 799999
Q ss_pred EEecC-CCceEEEEEEeCCC-----CCH----HHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 593 SIRVL-RDERICVIAEQRPD-----CSE----EESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 593 ~~~~~-~~~~l~a~v~~~~~-----~~~----~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
++++. .++.++|||++.++ .+. ++|+++++++|++|++|+.| +.+++||+|+||||+|+.|++
T Consensus 547 g~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i-------~~v~~lP~T~sGKi~R~~Lr~ 619 (647)
T PTZ00237 547 GIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKI-------IIVNQLPKTKTGKIPRQIISK 619 (647)
T ss_pred eeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEE-------EEcCCCCCCCCccEeHHHHHH
Confidence 99964 67889999997642 232 45678889999999999986 556999999999999999999
Q ss_pred HHHc
Q psy14338 663 RFLE 666 (1761)
Q Consensus 663 ~~~~ 666 (1761)
.+..
T Consensus 620 ~~~~ 623 (647)
T PTZ00237 620 FLND 623 (647)
T ss_pred HHcC
Confidence 8743
|
|
| >PRK07769 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-63 Score=655.55 Aligned_cols=543 Identities=23% Similarity=0.386 Sum_probs=409.2
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECC----CCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCC
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDP----NGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNND 156 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~----~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~ 156 (1761)
.++.++|+++++++|+++|+++.+. +|. .+.+||+||+++++++|+.|+ +. +++||+|+|+++|+
T Consensus 21 ~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~-~~~~Ty~el~~~v~~lA~~L~--------~~-~~~gd~V~i~~~n~- 89 (631)
T PRK07769 21 TNLVRHVERWAKVRGDKLAYRFLDFSTERDGV-ARDLTWSQFGARNRAVGARLQ--------QV-TKPGDRVAILAPQN- 89 (631)
T ss_pred CCHHHHHHHHHHhCCCCeEEEEeccCCCCCCc-eeEeeHHHHHHHHHHHHHHHH--------Hh-cCCCCEEEEEcCCC-
Confidence 5799999999999999999987541 121 258999999999999999998 65 79999999999999
Q ss_pred chhHHHHHHHHHHhCCeEEec-CCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-------ccceeccCCC
Q psy14338 157 PINFLCAFYGCIFAGIVPVPI-EVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-------GEVVAFKGWP 228 (1761)
Q Consensus 157 ~~~~vva~lAvlkaG~~~vpl-dp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-------~~~~~~~~~~ 228 (1761)
++|++++|||+++|+++||+ ++..+.. .+++.+++++++++++|+++...+.+..... ..++..+.
T Consensus 90 -~e~~~~~lA~~~~G~v~vpl~~~~~~~~---~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 163 (631)
T PRK07769 90 -LDYLIAFFGALYAGRIAVPLFDPAEPGH---VGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDA-- 163 (631)
T ss_pred -hHHHHHHHHHHHcCCEEEeeCCCCccch---HHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccc--
Confidence 99999999999999999999 5565421 2489999999999999998765433221100 01111110
Q ss_pred cceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchh
Q psy14338 229 KLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET 308 (1761)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 308 (1761)
...............++++|||+|||||||+||||+++|+++...+......++++++|+++.++|++|++
T Consensus 164 ---------~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 164 ---------VPDEVGATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDM 234 (631)
T ss_pred ---------cccccccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCch
Confidence 00000000111235679999999999999999999999999999888888888999999999999999999
Q ss_pred hhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCc---eEEEecCHHHHHHhhcC---CC--CCCCCCCceeEEE
Q psy14338 309 GLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRA---SVAVVKSRDLHWGLLAT---KD--HKDISLSSLRLLL 380 (1761)
Q Consensus 309 ~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~v---t~~~~~p~~~~~~ll~~---~~--~~~~~l~~Lr~v~ 380 (1761)
|+.. ++.+++.|++++++++..+..++..+++.+.++++ |++..+|+ ++..++.. +. ....++++||.++
T Consensus 235 gl~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~-~~~~l~~~~~~~~~~~~~~~l~~lr~~~ 312 (631)
T PRK07769 235 GLIT-VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPN-FAFEHAAARGLPKDGEPPLDLSNVKGLL 312 (631)
T ss_pred hhHH-HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCc-hHHHHHHhhccchhcccCcchhheeeEE
Confidence 9985 78888999999998743223489999999999886 77888875 55444432 11 1135688999999
Q ss_pred ecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccc-eeeecCCCccC
Q psy14338 381 VGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYG-VVRVDQENSLT 459 (1761)
Q Consensus 381 ~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~ 459 (1761)
+| |++++++++++|.+.+...|++...++|+||+||++.+++..+...... ........+..+ .+.++.. ...
T Consensus 313 ~g--g~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~-~~~ 386 (631)
T PRK07769 313 NG--SEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPT---VIYVDRDELNAGRFVEVPAD-APN 386 (631)
T ss_pred ec--cCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCce---EEEEcHHHHhCCCeEecCCC-CCC
Confidence 99 9999999999999988654544335999999999986655433210000 000000000000 0111111 111
Q ss_pred cccccccCCCCCCcEEEEEeCC-CCcccCCCCCceEEEEecCCccccccCCCcccccccccccccc------CCCccCCC
Q psy14338 460 SLTLQDCGQVMPGCIMTVVKMD-SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLA------DGTALSQD 532 (1761)
Q Consensus 460 ~~~~~~iG~p~~~~~~~I~d~~-~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~------~g~~~~~~ 532 (1761)
.....++|+|+++.+++|+|++ ++ ++|.|++|||||+|++++.||||+|+.|+++|...+... .| ...++
T Consensus 387 ~~~~~s~G~~~~~~~~~ivd~~~g~--~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~-~~~~~ 463 (631)
T PRK07769 387 AVAQVSAGKVGVSEWAVIVDPETAS--ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEG-APDDA 463 (631)
T ss_pred ceeEEeCCCcCCCcEEEEEcCCCCc--CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccC-cccCC
Confidence 2234689999999999999964 54 689999999999999999999999999999997532110 00 00236
Q ss_pred ceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHh-cCCccccccce--EEEEEEec-------------
Q psy14338 533 TYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLA-VEPMKFIYRGR--IAVFSIRV------------- 596 (1761)
Q Consensus 533 ~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~-~~~v~~~~~~~--a~v~~~~~------------- 596 (1761)
|||||||+|+++ ||+|+|+||+||+||++|+||+|.|||++|.+ ++.| .+ ++|+++++
T Consensus 464 gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v-----~~~~~av~~v~d~~~~~~~~~~~~~ 537 (631)
T PRK07769 464 LWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKAL-----RTGYVAAFSVPANQLPQVVFDDSHA 537 (631)
T ss_pred CeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccc-----cCCcEEEEEeccccccccccccccc
Confidence 899999999996 99999999999999999999999999999987 4555 45 88888886
Q ss_pred ------C-CCceEEEEEEeCCC---CCHHHHHHHHHHHHHH-hhh-cceeeeeEEEEeCCCCccCCCCCcccHHHHHHHH
Q psy14338 597 ------L-RDERICVIAEQRPD---CSEEESFQWMSRVLQA-VDS-IHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664 (1761)
Q Consensus 597 ------~-~~~~l~a~v~~~~~---~~~~~l~~~l~~~Lp~-y~~-P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~ 664 (1761)
+ .++.++++++..++ .+.++|.++++++|+. |++ |..+ .|+..++||+|++|||+|++|++.+
T Consensus 538 ~~~~~~~~~ge~~~a~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~~-----~~v~~~~lP~t~~GKi~r~~l~~~~ 612 (631)
T PRK07769 538 GLKFDPEDTSEQLVIVAERAPGAHKLDPQPIADDIRAAIAVRHGVTVRDV-----LLVPAGSIPRTSSGKIARRACRAAY 612 (631)
T ss_pred ccccccCCCCccEEEEEEecCccccccHHHHHHHHHHHHHHHcCCCccEE-----EEECCCccccCCCcHHHHHHHHHHH
Confidence 2 57789999987653 5778999999999996 564 7665 4565568999999999999999998
Q ss_pred HcCCCCc
Q psy14338 665 LEGNLHP 671 (1761)
Q Consensus 665 ~~~~~~~ 671 (1761)
.++.+..
T Consensus 613 ~~~~~~~ 619 (631)
T PRK07769 613 LDGSLRS 619 (631)
T ss_pred HcCCCcc
Confidence 8765543
|
|
| >COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-64 Score=553.24 Aligned_cols=498 Identities=19% Similarity=0.257 Sum_probs=422.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.+++.+++.++|+++||++||++.+ +.+||+||+++++++|..|+ +.|+++||+|.+.++|. .+
T Consensus 27 d~~l~d~L~~~A~~~pdriAv~d~~------~~~sY~eLdqr~d~LAa~l~--------~lGi~~Gd~vlvQLpN~--~e 90 (542)
T COG1021 27 DRTLTDILTDHAARYPDRIAVIDGE------RRLSYAELDQRADRLAAGLR--------RLGIKPGDTVLVQLPNV--AE 90 (542)
T ss_pred CCcHHHHHHHHHhhcCCceEEecCc------ccccHHHHHHHHHHHHHHHH--------hcCCCCCCEEEEECCch--HH
Confidence 5789999999999999999999766 68999999999999999999 99999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc---------CcccccccceeccCCCcc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG---------LPKTAAGEVVAFKGWPKL 230 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 230 (1761)
|++++||.+|+|++.|.-=|++-.. +|.+..+.+.++.+|.+.....- +.+...-+.+.+.+....
T Consensus 91 f~~~~FALlrlGv~PVlALpsHr~~-----Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~ 165 (542)
T COG1021 91 FYITFFALLRLGVAPVLALPSHRAS-----ELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEH 165 (542)
T ss_pred HHHHHHHHHHcCcchhhccchhhHH-----HHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCC
Confidence 9999999999999999888877655 79999999999999988653211 111111111222121111
Q ss_pred eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhh
Q psy14338 231 TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
.......+........+..+..++++||...+-||||+||-+..+|.....++....+..+++..+|+|+.+|..|.+-+
T Consensus 166 ~~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfpl 245 (542)
T COG1021 166 PSVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPL 245 (542)
T ss_pred cchhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCC
Confidence 11111112222223344556778899999999999999999999999999999999999999999999999999888765
Q ss_pred HH-HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCC
Q psy14338 311 WH-SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWS 389 (1761)
Q Consensus 311 ~~-~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~ 389 (1761)
.. ++++.+.+|||+|+.+ ..+|.....+|++++||+..++|| +...|+...+....+++|||.+-+| |..++
T Consensus 246 ssPG~LGv~~agG~VVla~----~psp~~~F~lIerh~Vt~tALVPp-la~LWlqa~e~~~~~LsSLrllQVG--Garl~ 318 (542)
T COG1021 246 SSPGALGVFLAGGTVVLAP----DPSPELCFPLIERHGVTVTALVPP-LASLWLQAAEWERADLSSLRLLQVG--GARLS 318 (542)
T ss_pred CCcchhheeeeccEEEECC----CCCHHHHHHHHHHhccceEEeccH-HHHHHHHhhhcccCCchheeEEeec--CcccC
Confidence 42 5899999999999998 678999999999999999999987 8888888887888999999999999 99999
Q ss_pred HHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCC
Q psy14338 390 LSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQV 469 (1761)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 469 (1761)
+++.++....+ |+. +-+.+||.|.-+.-+.-. ++...-..+-|+|
T Consensus 319 ~~~Arrv~~~l---gC~---LQQVFGMAEGLvnyTRLD-----------------------------Dp~E~i~~TQGrP 363 (542)
T COG1021 319 ATLARRVPAVL---GCQ---LQQVFGMAEGLVNYTRLD-----------------------------DPPEIIIHTQGRP 363 (542)
T ss_pred HHHHhhchhhh---Cch---HHHHhhhhhhhhcccccC-----------------------------CchHheeecCCCc
Confidence 99999999998 553 999999999865433211 1112334578999
Q ss_pred C-CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 470 M-PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 470 ~-~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
+ |.-+++|+|++|+ +|++|++|||..+||-..+|||+.|+.++.+| +.+|||||||++++++||+
T Consensus 364 lsP~DEvrvvD~dg~--pv~pGE~G~LltRGPYTirGYyrap~HNa~aF------------~a~GFYrsGD~V~~~~dGy 429 (542)
T COG1021 364 LSPDDEVRVVDADGN--PVAPGEVGELLTRGPYTIRGYYRAPEHNARAF------------DADGFYRSGDLVRRDPDGY 429 (542)
T ss_pred CCCcceeEEecCCCC--CCCCCCcceeeecCCeeeeeeccCchhhhhcc------------CcCCceecCceeEecCCce
Confidence 8 5678999999998 59999999999999999999999999999999 4589999999999999999
Q ss_pred EEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC-CCHHHHHHHHHHH-H
Q psy14338 549 VFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD-CSEEESFQWMSRV-L 625 (1761)
Q Consensus 549 l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~-~~~~~l~~~l~~~-L 625 (1761)
|.+.||.||||+.+|++|..+|||+.|+.++.| .+|++++.+|. .||+.|||++.++. ....+++++|.+. |
T Consensus 430 l~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V-----~~AAlVampDelLGEksCAfiv~~~~~~~~~qlr~~L~~~Gl 504 (542)
T COG1021 430 LVVEGRVKDQINRGGEKIAAEEVENLLLRHPAV-----HDAALVAMPDELLGEKSCAFIVVKEPPLRAAQLRRFLRERGL 504 (542)
T ss_pred EEEEeeehhhhccccchhhHHHHHHHHhhCchh-----hhhhhhcCchhhcCcceeEEEEecCCCCCHHHHHHHHHHcch
Confidence 999999999999999999999999999998888 79999999976 79999999998876 7889999999886 9
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
..|++|.+| .| +++||+|+-||||+|+|++.+..
T Consensus 505 Aa~K~PDri-----e~--v~~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 505 AAFKLPDRI-----EF--VDSLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred hhhcCCcce-----ee--cccCCCcccccccHHHHHHHhhh
Confidence 999999998 34 59999999999999999988754
|
|
| >PRK07529 AMP-binding domain protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-62 Score=647.10 Aligned_cols=508 Identities=21% Similarity=0.233 Sum_probs=406.2
Q ss_pred cchhHHHHHHHHhhhcCCCcEEEEECCCC--ceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCC
Q psy14338 79 LPRNLEAAIQRYGSATYKAPVATVLDPNG--KLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNND 156 (1761)
Q Consensus 79 ~~~~l~~~~~~~a~~~pd~~Av~~~d~~g--~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~ 156 (1761)
.+.++.++|++.++++|+++|+.+....+ ...+++||+||.++++++|+.|+ +.|+++|++|+++++|+
T Consensus 23 ~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~--------~~Gi~~gd~V~i~~~n~- 93 (632)
T PRK07529 23 LPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLH--------SLGVGPGDVVAFLLPNL- 93 (632)
T ss_pred CCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC-
Confidence 35789999999999999999998753211 11268999999999999999999 88999999999999999
Q ss_pred chhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccc-----cC----ccccc-ccceeccC
Q psy14338 157 PINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLK-----GL----PKTAA-GEVVAFKG 226 (1761)
Q Consensus 157 ~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~-----~~----~~~~~-~~~~~~~~ 226 (1761)
+++++++|||+++| +++||+|.++++ ++.+++++++++++|++..... .+ ..... ..++..+.
T Consensus 94 -~e~~~~~lA~~~~G-i~~pi~~~~~~~-----~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 166 (632)
T PRK07529 94 -PETHFALWGGEAAG-IANPINPLLEPE-----QIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDL 166 (632)
T ss_pred -HHHHHHHHHHHHhC-EEEeCCCcCCHH-----HHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecC
Confidence 99999999999999 679999999977 8999999999999999865321 00 00000 01111110
Q ss_pred CCc-----------------cee-EEeccccCCCCC-CCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH
Q psy14338 227 WPK-----------------LTW-FVTEHLAKTPKD-WAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT 287 (1761)
Q Consensus 227 ~~~-----------------~~~-~~~~~~~~~~~~-~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~ 287 (1761)
... ..+ ...+.+...+.. ........++++|+++|||||||.||||+++|+++.+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~ 246 (632)
T PRK07529 167 ARYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGA 246 (632)
T ss_pred cccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHH
Confidence 000 000 001111111111 1112234679999999999999999999999999999888888
Q ss_pred HHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCcccc--CCHHHHHHHHHhcCceEEEecCHHHHHHhhcC
Q psy14338 288 QACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMK--VNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365 (1761)
Q Consensus 288 ~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~--~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~ 365 (1761)
..+++.++|++++.+|++|..+++..++.+|..|++++++++..+. .....+++.|+++++|++.++| +++..++..
T Consensus 247 ~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~ 325 (632)
T PRK07529 247 LLLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVP-TVYAALLQV 325 (632)
T ss_pred HhcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHH-HHHHHHHhC
Confidence 8888999999999999999998876689999999999998753211 1136788999999999999996 577777765
Q ss_pred CCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCc
Q psy14338 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGL 445 (1761)
Q Consensus 366 ~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~ 445 (1761)
+. ...++++||.+++| |+++++++.++|.+.+ |++ ++|.||+||++.+++..+..
T Consensus 326 ~~-~~~~~~slr~v~~g--g~~l~~~l~~~~~~~~---g~~---l~~~YG~TE~~~~~~~~~~~---------------- 380 (632)
T PRK07529 326 PV-DGHDISSLRYALCG--AAPLPVEVFRRFEAAT---GVR---IVEGYGLTEATCVSSVNPPD---------------- 380 (632)
T ss_pred cc-cCCCccceEEEEEc--CCCCCHHHHHHHHHHh---CCc---EeeeecccccCcccccCCcc----------------
Confidence 42 23468999999999 9999999999999987 554 99999999998766544311
Q ss_pred ccceeeecCCCccCcccccccCCCCCCcEEEEE--eCCCCc-ccCCCCCceEEEEecCCccccccCCCcccccccccccc
Q psy14338 446 SYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV--KMDSPS-YLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPL 522 (1761)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~--d~~~~~-~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~ 522 (1761)
.....+++|+|+++++++|+ |+++.. .+||.|+.|||+|+|++++.||+|++ .+.+.|.
T Consensus 381 -------------~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~-~~~~~~~---- 442 (632)
T PRK07529 381 -------------GERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAA-HNKGLWL---- 442 (632)
T ss_pred -------------ccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCc-ccccccc----
Confidence 01246789999999999985 666520 26999999999999999999999865 5666663
Q ss_pred ccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCce
Q psy14338 523 LADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDER 601 (1761)
Q Consensus 523 ~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~ 601 (1761)
+++||+|||+|++++||+++|+||+||+||++|+||+|.|||+.|.+++.| .+|+|++.++. .++.
T Consensus 443 --------~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V-----~~a~vvg~~d~~~ge~ 509 (632)
T PRK07529 443 --------EDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAV-----ALAAAVGRPDAHAGEL 509 (632)
T ss_pred --------CCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCe-----eEEEEEeccCCCCCce
Confidence 378999999999999999999999999999999999999999999998888 79999999854 6788
Q ss_pred EEEEEEeCCC--CCHHHHHHHHHHHHH-HhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 602 ICVIAEQRPD--CSEEESFQWMSRVLQ-AVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 602 l~a~v~~~~~--~~~~~l~~~l~~~Lp-~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+++|+++.++ .+.++++++++++|+ .|++|..+ +.+++||+|++||++|++|++.+..
T Consensus 510 ~~a~v~l~~~~~~~~~~l~~~~~~~l~~~~~~P~~i-------~~v~~lP~t~~GKi~r~~Lr~~~~~ 570 (632)
T PRK07529 510 PVAYVQLKPGASATEAELLAFARDHIAERAAVPKHV-------RILDALPKTAVGKIFKPALRRDAIR 570 (632)
T ss_pred eEEEEEEcCCCCCCHHHHHHHHHHhcchhccCCcEE-------EEecCCCCCCCCcccHHHHHHHHHH
Confidence 9999987764 568899999999997 47999986 4569999999999999999987754
|
|
| >PRK07769 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-62 Score=646.37 Aligned_cols=549 Identities=21% Similarity=0.329 Sum_probs=416.0
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccC----CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDT----RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~----~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
++.+.+...+. ++|+++|+++.+. ....+.+||+||+++++++|++|.+. +++||+|+|+++|++++++
T Consensus 22 ~l~~~l~~~a~-----~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~--~~~gd~V~i~~~n~~e~~~ 94 (631)
T PRK07769 22 NLVRHVERWAK-----VRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV--TKPGDRVAILAPQNLDYLI 94 (631)
T ss_pred CHHHHHHHHHH-----hCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh--cCCCCEEEEEcCCChHHHH
Confidence 45555555443 6799999986431 12246899999999999999999875 7999999999999999999
Q ss_pred HHHHHHHcCCEEEeC-CCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----cccccccCCccccCCCC
Q psy14338 1240 AFYGCLYVGAVPVTI-RPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----NVVDIKSWPTILDTDDM 1314 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpl-dp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 1314 (1761)
++|||+++|++++|+ +|..|. ..+++.+++++++++++|++......+...... ............ ...
T Consensus 95 ~~lA~~~~G~v~vpl~~~~~~~----~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 168 (631)
T PRK07769 95 AFFGALYAGRIAVPLFDPAEPG----HVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVP--DEV 168 (631)
T ss_pred HHHHHHHcCCEEEeeCCCCccc----hHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccccc--ccc
Confidence 999999999999999 555442 134899999999999999998765443322110 000000000000 000
Q ss_pred ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhh
Q psy14338 1315 PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVY 1394 (1761)
Q Consensus 1315 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~ 1394 (1761)
. .........++++++|+|||||||+||||+++|+++...+......+++.++++++.++|++|.+|+. .++.+++
T Consensus 169 ~---~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~-~~~~~~~ 244 (631)
T PRK07769 169 G---ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLI-TVLLPAL 244 (631)
T ss_pred c---cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhH-HHHHHHh
Confidence 0 00111235678999999999999999999999999999988888889999999999999999999984 5677788
Q ss_pred cCceEEEeCCCccccCHHHHHHHHHhcCc---eEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1395 SGHHSILIPPSEVEVNPALWLSAVSQYRV---RDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1395 ~G~~~vl~~~~~~~~~~~~l~~~i~~~~v---t~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
.|++++++++..+..++..+++.++++++ +++..+|+++..++.... .........++++||.+++||+++++ .
T Consensus 245 ~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~--~~~~~~~~~~l~~lr~~~~gg~~l~~-~ 321 (631)
T PRK07769 245 LGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARG--LPKDGEPPLDLSNVKGLLNGSEPVSP-A 321 (631)
T ss_pred hCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhc--cchhcccCcchhheeeEEeccCCCCH-H
Confidence 99999998653323489999999999886 789999998876654200 00001124578899999999999999 8
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.++|.+.|..+|.....+++.||+||++.++............+.+...+..+....+....+......++|+|+++++
T Consensus 322 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~ 401 (631)
T PRK07769 322 SMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEW 401 (631)
T ss_pred HHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcE
Confidence 88999999988887667799999999987765543322211112222222222222222223333344568999999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhccc---------CCCCCceEeeCceeEEeccC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT---------GNTGELYARTGYLGFLRRTS 1622 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~---------~~~~~~~yrTGDlg~~~~~~ 1622 (1761)
++|+|+++++++|.|++|||||+|++++.|||| +|+.|+++|...+.. ...++|||||||+|++
T Consensus 402 ~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~---~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~---- 474 (631)
T PRK07769 402 AVIVDPETASELPDGQIGEIWLHGNNIGTGYWG---KPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVY---- 474 (631)
T ss_pred EEEEcCCCCcCCCCCCEEEEEecCCCccccccC---ChhHHHHHHhhhcccccccccccCcccCCCeeeccccccE----
Confidence 999998778999999999999999999999999 999999999743211 1124689999999999
Q ss_pred CCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHh-ccCcce--eEEEeeC---------------
Q psy14338 1623 PAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRA-HKKIAE--CAVFTWT--------------- 1684 (1761)
Q Consensus 1623 ~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~-~p~V~~--a~Vv~~~--------------- 1684 (1761)
+ | |+ |+|+||+||+||++|+||+|.|||+ +|.+ ||+|.+ |+|++..
T Consensus 475 --~-d--------G~----l~i~GR~~d~Ik~~G~~V~p~eIE~-~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~ 538 (631)
T PRK07769 475 --F-D--------GE----LYITGRVKDLVIIDGRNHYPQDLEY-TAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAG 538 (631)
T ss_pred --E-C--------CE----EEEEcccccEEEECCeeeCHHHHHH-HHHhccccccCCcEEEEEecccccccccccccccc
Confidence 5 8 99 9999999999999999999999999 7775 899998 7887633
Q ss_pred ---------CeEEEEEEeCCC--chhHhhHHHHHHHHHhhhcCc-eeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCC
Q psy14338 1685 ---------NLLVVVVELDGN--ESEALDLVPLVTNAVLEEHHL-IVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 1752 (1761)
Q Consensus 1685 ---------~~~~a~v~~~~~--~~~~~~l~~~l~~~~Lp~~~~-vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~ 1752 (1761)
+.++++|++... ..+.++|.++|+++ |+..|+ .|+.+++++.++||+|++|||+|++|++.+.++.+
T Consensus 539 ~~~~~~~~ge~~~a~v~~~~~~~~~~~~~l~~~~~~~-l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~~ 617 (631)
T PRK07769 539 LKFDPEDTSEQLVIVAERAPGAHKLDPQPIADDIRAA-IAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGSL 617 (631)
T ss_pred cccccCCCCccEEEEEEecCccccccHHHHHHHHHHH-HHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCCC
Confidence 367888876432 45678999999997 774466 58889999744799999999999999999988877
Q ss_pred Chhh
Q psy14338 1753 DPIY 1756 (1761)
Q Consensus 1753 ~~~~ 1756 (1761)
+.-|
T Consensus 618 ~~~~ 621 (631)
T PRK07769 618 RSGY 621 (631)
T ss_pred cccc
Confidence 6544
|
|
| >PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-62 Score=638.16 Aligned_cols=501 Identities=18% Similarity=0.232 Sum_probs=412.2
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|++.++.+|+++|+++.+.++.+.+.+||+||.++++++|+.|+ +.|+++|++|+++++|+ ++
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~--------~~g~~~g~~Val~~~n~--~e 92 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLA--------RLGVGRGDVVSCQLPNW--WE 92 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCC--hH
Confidence 357999999999999999999875522222268999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccc-----cCcc----ccc-ccceeccCCCc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLK-----GLPK----TAA-GEVVAFKGWPK 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~-----~~~~----~~~-~~~~~~~~~~~ 229 (1761)
+++++|||+++|++++|++|.++.+ ++.+++++++++++|+++.... .+.. ... ..++.......
T Consensus 93 ~~~~~la~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (547)
T PRK13295 93 FTVLYLACSRIGAVLNPLMPIFRER-----ELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGA 167 (547)
T ss_pred HHHHHHHHHhcCcEEeccccccCHH-----HHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCc
Confidence 9999999999999999999999976 8999999999999999875421 0000 000 01111110000
Q ss_pred ceeEEecccc-------CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEcc
Q psy14338 230 LTWFVTEHLA-------KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVL 302 (1761)
Q Consensus 230 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~ 302 (1761)
..+ .+... .............++++|+|+|||||||+||||+++|+++...+......+++.+++++++++
T Consensus 168 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~ 245 (547)
T PRK13295 168 DSF--EALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMAS 245 (547)
T ss_pred cCH--HHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEec
Confidence 000 00000 000001111234678999999999999999999999999999998888889999999999999
Q ss_pred CCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEec
Q psy14338 303 DFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVG 382 (1761)
Q Consensus 303 ~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~g 382 (1761)
|++|..++...++.+|..|+++++.+ .+++..+++.++++++|++..+|+ ++..++........++++||.+++|
T Consensus 246 p~~h~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~vt~~~~~p~-~~~~l~~~~~~~~~~~~~l~~~~~~ 320 (547)
T PRK13295 246 PMAHQTGFMYGLMMPVMLGATAVLQD----IWDPARAAELIRTEGVTFTMASTP-FLTDLTRAVKESGRPVSSLRTFLCA 320 (547)
T ss_pred CchhhhhHHHHHHHHHHcCCeEEeCC----CCCHHHHHHHHHHcCCcEEEecHH-HHHHHHhcccccCCCcccceEEEEe
Confidence 99999987667999999999999987 678999999999999999999865 7777776555455678899999999
Q ss_pred CCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCccc
Q psy14338 383 DGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLT 462 (1761)
Q Consensus 383 g~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1761)
|+++++++.++|.+.+ |.+ ++|.||+||++.+++..+.. .....
T Consensus 321 --G~~l~~~~~~~~~~~~---~~~---~~~~YG~TE~~~~~~~~~~~----------------------------~~~~~ 364 (547)
T PRK13295 321 --GAPIPGALVERARAAL---GAK---IVSAWGMTENGAVTLTKLDD----------------------------PDERA 364 (547)
T ss_pred --cCCCCHHHHHHHHHHh---CCC---eEEeccCCCCCCeeeccCCC----------------------------cchhc
Confidence 9999999999999988 443 99999999998766543311 00112
Q ss_pred ccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEE
Q psy14338 463 LQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGF 542 (1761)
Q Consensus 463 ~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~ 542 (1761)
..++|+|+++++++|+|++++ ++|.|+.|||+|+|++++.||+++|+.|++.+ +|||+|||+|+
T Consensus 365 ~~~~G~~~~~~~v~i~d~~~~--~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~--------------~g~~~TGD~~~ 428 (547)
T PRK13295 365 STTDGCPLPGVEVRVVDADGA--PLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDA--------------DGWFDTGDLAR 428 (547)
T ss_pred cCccccccCCcEEEEECCCCC--CCCCCCCCeEEEEcCcccccccCCccccccCC--------------CCCeecceEEE
Confidence 457899999999999999886 58999999999999999999999999998652 67999999999
Q ss_pred EeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHH
Q psy14338 543 LGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQ 619 (1761)
Q Consensus 543 ~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~ 619 (1761)
+++||+++|.||.|++||++|+||+|.|||+.|.+++.+ .+++|++.++. .++.+++++++..+ .+.+++++
T Consensus 429 ~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~ 503 (547)
T PRK13295 429 IDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAI-----AQVAIVAYPDERLGERACAFVVPRPGQSLDFEEMVE 503 (547)
T ss_pred EcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCe-----eeEEEEeeecCCCCcEEEEEEEeCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999998887 79999998854 56889999987654 45688999
Q ss_pred HHHH-HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 620 WMSR-VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 620 ~l~~-~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++++ .|+.||+|..+ +.+++||+|.+||++|++|++.+.+
T Consensus 504 ~~~~~~l~~~~~P~~i-------~~v~~lP~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 504 FLKAQKVAKQYIPERL-------VVRDALPRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred HHHhccCccccCCcEE-------EEeccCCCCCCccccHHHHHHHHhc
Confidence 9986 79999999986 5569999999999999999988754
|
|
| >PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-62 Score=636.35 Aligned_cols=509 Identities=20% Similarity=0.255 Sum_probs=387.5
Q ss_pred HHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHH
Q psy14338 83 LEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLC 162 (1761)
Q Consensus 83 l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vv 162 (1761)
+.++++++++++|+++|+++.+.+. .+++||+||+++++++|+.|. ++ ++|++|+|+++|+ +++++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~--~~~~ty~el~~~~~~lA~~L~--------~~--~~g~~V~l~~~~~--~e~~~ 69 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGL--WRRHPWPEVHGRAENVAARLL--------DR--DRPGAVGLVGEPT--VELVA 69 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCc--ceeecHHHHHHHHHHHHHHHH--------hc--CCCCeEEEEcCCC--HHHHH
Confidence 7788999999999999998754322 268999999999999999999 65 7999999999999 99999
Q ss_pred HHHHHHHhCCeEEecCCCCCcC---ccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 163 AFYGCIFAGIVPVPIEVPLTRR---DAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 163 a~lAvlkaG~~~vpldp~~p~~---~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
++|||+|+|++++ ++|..... ....+++.+++++++++++|++......+..... . +...+. .. ..
T Consensus 70 ~~la~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-~-~~~~~~-------~~-~~ 138 (525)
T PRK05851 70 AIQGAWLAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDS-S-VTVHDL-------AT-AA 138 (525)
T ss_pred HHHHHHHcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhc-c-cccccc-------cc-cc
Confidence 9999999999865 44432110 0112356678999999999998765432221110 0 000000 00 00
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCC-CCCeEEEccCCcchhhhHHHHHHHH
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYT-EGENMVCVLDFKRETGLWHSVLTSV 318 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~i~~~L 318 (1761)
..... .......++++|||+|||||||+||||+++|+++.+.+.+....++++ ++|++++++|++|+++++. ++.+|
T Consensus 139 ~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l 216 (525)
T PRK05851 139 HTNRS-ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAF-LLTAA 216 (525)
T ss_pred ccccc-ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHH-HHHHH
Confidence 00000 011224679999999999999999999999999999999888889998 9999999999999999985 99999
Q ss_pred hcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhc-CC-CCCCCCCCceeEEEecCCCccCCHHHHHHH
Q psy14338 319 LNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLA-TK-DHKDISLSSLRLLLVGDGANPWSLSSCDQF 396 (1761)
Q Consensus 319 ~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~-~~-~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~ 396 (1761)
+.|+++++.+...+..++..+++.+.++++|++. +|+ ++..++. .. .....++++||.+++| |+++++++.++|
T Consensus 217 ~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~-~p~-~~~~~l~~~~~~~~~~~l~~lr~~~~g--G~~l~~~~~~~~ 292 (525)
T PRK05851 217 LAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTA-APN-FAYNLIGKYARRVSDVDLGALRVALNG--GEPVDCDGFERF 292 (525)
T ss_pred HcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEe-CCc-HHHHHHHHhhccccCCCHHHhheeEec--cccCCHHHHHHH
Confidence 9999999987432234688999999999999874 455 4444332 11 2234467899999999 999999999999
Q ss_pred HHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEE
Q psy14338 397 LSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMT 476 (1761)
Q Consensus 397 ~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 476 (1761)
.+.+...|++...++|.||+||++.+++........ .. ......+.....+..++|+|++|++++
T Consensus 293 ~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~~~~~~vG~p~~g~~v~ 357 (525)
T PRK05851 293 ATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGL-------------RV--DEVTTDDGSGARRHAVLGNPIPGMEVR 357 (525)
T ss_pred HHHHhhcCCChhhcccccchhhhceEEEecCCCCCc-------------ee--eeeccccCcccceeeeecCCCCCcEEE
Confidence 886543355433599999999998655532210000 00 000000111122457899999999999
Q ss_pred EEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccC
Q psy14338 477 VVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRD 556 (1761)
Q Consensus 477 I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d 556 (1761)
|+|+++.. ++|.|+.|||+|+|+++++|||++|+.+. ++||+|||+|+++ ||.|+|+||+|
T Consensus 358 i~d~~~~~-~~~~g~~GEl~v~g~~~~~GY~~~~~~~~-----------------~~~~~TGDl~~~~-~G~l~~~GR~d 418 (525)
T PRK05851 358 ISPGDGAA-GVAGREIGEIEIRGASMMSGYLGQAPIDP-----------------DDWFPTGDLGYLV-DGGLVVCGRAK 418 (525)
T ss_pred EECCCCCc-cCCCCCeEEEEEecCchhhccccCCccCC-----------------CCceeccceEEEE-CCEEEEEeecC
Confidence 99988763 58999999999999999999999986432 6899999999997 89999999999
Q ss_pred CeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeC-CCCCHHHHHHHHHHHHHHh--hhcc
Q psy14338 557 GLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQR-PDCSEEESFQWMSRVLQAV--DSIH 632 (1761)
Q Consensus 557 ~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~-~~~~~~~l~~~l~~~Lp~y--~~P~ 632 (1761)
|+||++|+||+|.|||++|.+++.| .+|+|+++++. .++.++++++.. .+.+.++++++++++|+.| |+|.
T Consensus 419 d~i~~~G~~v~p~eIE~~l~~~p~V-----~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~l~~~P~ 493 (525)
T PRK05851 419 ELITVAGRNIFPTEIERVAAQVRGV-----REGAVVAVGTGEGSARPGLVIAAEFRGPDEAGARSEVVQRVASECGVVPS 493 (525)
T ss_pred CEEEECCEEeCHHHHHHHHHhCCCc-----ccceEEEEEecCCCCceeEEEEEEecCcchHHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999999999999888 68999998753 556666665543 3356678889999999999 9998
Q ss_pred eeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 633 QVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 633 ~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.+ .|+..++||+|+||||+|++|++.+.+
T Consensus 494 ~~-----~~v~~~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 494 DV-----VFVAPGSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred EE-----EEECCCCcCcCcchHHHHHHHHHHHHh
Confidence 86 455334999999999999999998765
|
|
| >PRK12476 putative fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-62 Score=646.37 Aligned_cols=549 Identities=22% Similarity=0.366 Sum_probs=404.8
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECC----CCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCC
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDP----NGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNND 156 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~----~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~ 156 (1761)
.++.++|+++++++|+++|+++.+. +|. .+.+||+||.++++++|++|+ +. +++||+|+++++|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~-~~~~Ty~el~~~~~~lA~~L~--------~~-~~~gd~V~l~~~n~- 102 (612)
T PRK12476 34 TTLISLIERNIANVGDTVAYRYLDHSHSAAGC-AVELTWTQLGVRLRAVGARLQ--------QV-AGPGDRVAILAPQG- 102 (612)
T ss_pred CcHHHHHHHHHHhCCCceEEEEEccCCCCCCc-ceEEeHHHHHHHHHHHHHHHH--------Hh-cCCCCEEEEECCCC-
Confidence 5788999999999999999988642 121 258999999999999999998 65 89999999999999
Q ss_pred chhHHHHHHHHHHhCCeEEec-CCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEe
Q psy14338 157 PINFLCAFYGCIFAGIVPVPI-EVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVT 235 (1761)
Q Consensus 157 ~~~~vva~lAvlkaG~~~vpl-dp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (1761)
++|++++|||+++|+++||+ ++.++.. .+++.+++++++++++|+++.....+...... . .......++..
T Consensus 103 -~e~~~~~lA~~~aG~v~vpl~~~~~~~~---~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~---~~~~~~~~i~~ 174 (612)
T PRK12476 103 -IDYVAGFFAAIKAGTIAVPLFAPELPGH---AERLDTALRDAEPTVVLTTTAAAEAVEGFLRN-L---PRLRRPRVIAI 174 (612)
T ss_pred -hhHHHHHHHHHHcCceeEecCCCCcchh---HHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhh-c---ccccCceEEEe
Confidence 99999999999999999999 6777621 23899999999999999987654332111000 0 00000000001
Q ss_pred ccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcC-CCCCCeEEEccCCcchhhhHHHH
Q psy14338 236 EHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH-YTEGENMVCVLDFKRETGLWHSV 314 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~i 314 (1761)
+................++++|||+|||||||+||||+++|+++.+.+......++ +.+++++++++|++|++++.. +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~-~ 253 (612)
T PRK12476 175 DAIPDSAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSM-I 253 (612)
T ss_pred ccccccccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHH-H
Confidence 11110000111112346789999999999999999999999999988777777778 788999999999999999985 7
Q ss_pred HHHHhcCcEEEEeCCccccCCHHHHHHHHH--hcCceEEEecCHHHHHHhhcCC----CCCCCCCCceeEEEecCCCccC
Q psy14338 315 LTSVLNGMHAVYIPYALMKVNPASWMQMIT--KYRASVAVVKSRDLHWGLLATK----DHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 315 ~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~--~~~vt~~~~~p~~~~~~ll~~~----~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
+.+++.|+++++..+..+..+|..|++.++ ++++|++..+|+ ++..++... .....++++|| +++| |+++
T Consensus 254 ~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~~l~~lr-~~~g--g~~~ 329 (612)
T PRK12476 254 GFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPN-FAYEWAAQRGLPAEGDDIDLSNVV-LIIG--SEPV 329 (612)
T ss_pred HHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCc-HHHHHHHHhcChhhhcCcchhHhe-EEec--ccCC
Confidence 777778888877764322348999999995 589999999875 665555431 11234678999 8888 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccc-eeeecCCCccCcccccccC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYG-VVRVDQENSLTSLTLQDCG 467 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~iG 467 (1761)
++++.++|.+.++..|++...++|.||+||++..++....... .+........+..+ .+.+... ........++|
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~G 405 (612)
T PRK12476 330 SIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAE---PSVVYLDREQLGAGRAVRVAAD-APNAVAHVSCG 405 (612)
T ss_pred CHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCC---ceEEEEcHHHhhCCCeeecCCC-CCCcceeEeCC
Confidence 9999999999886545543459999999999765433211000 00000000000000 0011110 11112346899
Q ss_pred CCCCCcEEEEEeCC-CCcccCCCCCceEEEEecCCccccccCCCcccccccccccccc--CCC----ccCCCceEeecce
Q psy14338 468 QVMPGCIMTVVKMD-SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLA--DGT----ALSQDTYTRSGLL 540 (1761)
Q Consensus 468 ~p~~~~~~~I~d~~-~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~--~g~----~~~~~~~yrTGDl 540 (1761)
+|++|++++|+|++ ++ ++|.|++|||+|+|++++.||||+|+.|+++|...+... +|. ..++++||||||+
T Consensus 406 ~~~~g~~v~ivd~~~g~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDl 483 (612)
T PRK12476 406 QVARSQWAVIVDPDTGA--ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDL 483 (612)
T ss_pred CcCCCCEEEEEeCCCCc--CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecccc
Confidence 99999999999988 65 599999999999999999999999999999997432110 110 0013579999999
Q ss_pred EEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhc-CCccccccce--EEEEEEecCCCceEEEEEEeCCC---CCH
Q psy14338 541 GFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAV-EPMKFIYRGR--IAVFSIRVLRDERICVIAEQRPD---CSE 614 (1761)
Q Consensus 541 ~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~-~~v~~~~~~~--a~v~~~~~~~~~~l~a~v~~~~~---~~~ 614 (1761)
|+++ ||+|+|+||+||+||++|+||+|.|||++|.++ +.| .+ ++|+++++..++.++++++..++ .+.
T Consensus 484 g~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V-----~~~~v~v~~~~~~~~~~~~~~v~~~~~~~~~~~ 557 (612)
T PRK12476 484 GVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMV-----RRGYVTAFTVPAEDNERLVIVAERAAGTSRADP 557 (612)
T ss_pred ceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccc-----cCCcEEEEEecCCCcceEEEEEEecCCcccccH
Confidence 9985 999999999999999999999999999999864 555 56 67788876668899999987654 467
Q ss_pred HHHHHHHHHHHHH-hhh-cceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCC
Q psy14338 615 EESFQWMSRVLQA-VDS-IHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLH 670 (1761)
Q Consensus 615 ~~l~~~l~~~Lp~-y~~-P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~ 670 (1761)
+++.+++++.|.. |++ |..+ .|+..++||+|++|||||++|++.+.++.+.
T Consensus 558 ~~l~~~~~~~l~~~~~~~p~~v-----~~v~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 610 (612)
T PRK12476 558 APAIDAIRAAVSRRHGLAVADV-----RLVPAGAIPRTTSGKLARRACRAQYLDGRLG 610 (612)
T ss_pred HHHHHHHHHHHHHhhCCcceEE-----EEECCCCcCcCCchHHHHHHHHHHHHcCCCC
Confidence 8899999999884 887 4554 4676668999999999999999999877654
|
|
| >PLN02736 long-chain acyl-CoA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-63 Score=656.88 Aligned_cols=501 Identities=15% Similarity=0.166 Sum_probs=389.1
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEE---CCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCC
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVL---DPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNND 156 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~---d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~ 156 (1761)
..+++++|++.++++|+++|+.+. ++.....+.+||+||+++++++|+.|+ +.|+++||+|+|+++|+
T Consensus 43 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~--------~~Gv~~gd~Vai~~~n~- 113 (651)
T PLN02736 43 IGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLV--------QHGIPKGACVGLYFINR- 113 (651)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCC-
Confidence 358999999999999999999642 221111257999999999999999999 89999999999999999
Q ss_pred chhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc----c-ccceeccCCC---
Q psy14338 157 PINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA----A-GEVVAFKGWP--- 228 (1761)
Q Consensus 157 ~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~----~-~~~~~~~~~~--- 228 (1761)
++|++++|||+++|+++||+++.++.+ ++.+++++++++++|++....+.+.... . ..++..+...
T Consensus 114 -~e~~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~ 187 (651)
T PLN02736 114 -PEWLIVDHACSAYSYVSVPLYDTLGPD-----AVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPL 187 (651)
T ss_pred -HHHHHHHHHHHHcCCeEEEeecCCCHH-----HHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhh
Confidence 999999999999999999999999876 8999999999999999876543321110 0 0111111000
Q ss_pred -------cceeEEeccc-cCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEE
Q psy14338 229 -------KLTWFVTEHL-AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVC 300 (1761)
Q Consensus 229 -------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~ 300 (1761)
.......+.+ ..............++|+|+|+|||||||.||||++||+++++.+.+....+++.++|++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~ 267 (651)
T PLN02736 188 PSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHIS 267 (651)
T ss_pred hhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEE
Confidence 0000001111 11010111123357899999999999999999999999999999998888889999999999
Q ss_pred ccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC-------------
Q psy14338 301 VLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD------------- 367 (1761)
Q Consensus 301 ~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~------------- 367 (1761)
++|++|+++++. ++.+|+.|+++++.+ .++..+++.|+++++|+++.+|. ++..++....
T Consensus 268 ~lPl~h~~~~~~-~~~~l~~G~~i~~~~-----~~~~~~~~~i~~~~~t~~~~vP~-~~~~l~~~~~~~~~~~~~~~~~~ 340 (651)
T PLN02736 268 YLPLAHIYERVN-QIVMLHYGVAVGFYQ-----GDNLKLMDDLAALRPTIFCSVPR-LYNRIYDGITNAVKESGGLKERL 340 (651)
T ss_pred eCCHHHHHHHHH-HHHHHHcCCEEEEeC-----CCHHHHHHHHHHhCCcEEecchH-HHHHHHHHHHHHHhcccHHHHHH
Confidence 999999999985 899999999999876 27889999999999999999974 6655433100
Q ss_pred ---------------CCC-------------CCC-CceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcccccccccc
Q psy14338 368 ---------------HKD-------------ISL-SSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSE 418 (1761)
Q Consensus 368 ---------------~~~-------------~~l-~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE 418 (1761)
... ..+ ++||.+++| |+++++++.++|.+.+ |++ ++|+||+||
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~g--Ga~l~~~~~~~~~~~~---g~~---~~~~YG~TE 412 (651)
T PLN02736 341 FNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSG--ASPLSPDVMEFLRICF---GGR---VLEGYGMTE 412 (651)
T ss_pred HHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeC--CCCCCHHHHHHHHHHh---CCC---eEEEechHH
Confidence 000 011 489999999 9999999999998887 544 999999999
Q ss_pred ccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCc--ccCCCCCceEEE
Q psy14338 419 CLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPS--YLCKTDEVGEIC 496 (1761)
Q Consensus 419 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~--~~~p~G~~GEL~ 496 (1761)
++..++..... ....+++|+|++|++++|+|.++.. ....++..|||+
T Consensus 413 ~~~~~~~~~~~------------------------------~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~ 462 (651)
T PLN02736 413 TSCVISGMDEG------------------------------DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEIC 462 (651)
T ss_pred hchheeccCCC------------------------------CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEE
Confidence 97554422210 1235689999999999999943211 012344579999
Q ss_pred EecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE-CCcccChHHHHHHH
Q psy14338 497 VASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV-TGRKHNADDIIATV 575 (1761)
Q Consensus 497 i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki-~G~rIe~~eIE~~l 575 (1761)
|+||++++||||+|+.|+++|. .+|||||||+|++|+||+|+|+||+||+||+ +|+||+|.|||++|
T Consensus 463 vrgp~v~~GY~~~~~~t~~~~~------------~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l 530 (651)
T PLN02736 463 VRGPIIFKGYYKDEVQTREVID------------EDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVY 530 (651)
T ss_pred ecCCccccccccCHHHHHhhhc------------cCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHH
Confidence 9999999999999999999983 3799999999999999999999999999998 59999999999999
Q ss_pred HhcCCccccccceEEEEEEecCCCceEEEEEEeCCC----------CCHHHHHHHHH------------------HHHHH
Q psy14338 576 LAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD----------CSEEESFQWMS------------------RVLQA 627 (1761)
Q Consensus 576 ~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~----------~~~~~l~~~l~------------------~~Lp~ 627 (1761)
.+++.| .+|+|++. ..++.++|+|++.++ .+.+++.++++ +.|+.
T Consensus 531 ~~~p~V-----~~a~V~g~--~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 603 (651)
T PLN02736 531 AKCKFV-----AQCFVYGD--SLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRG 603 (651)
T ss_pred hcCCCe-----eEEEEEec--CCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCc
Confidence 998888 79999883 457789999998642 22233333332 24899
Q ss_pred hhhcceeeeeEEEEeCCCCcc------CCCCCcccHHHHHHHHHc
Q psy14338 628 VDSIHQVGLYCLALVPPNYLP------KTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 628 y~~P~~i~~~~v~~v~~~~lP------~t~~GKidR~~L~~~~~~ 666 (1761)
|++|++| +.+++.| +|++||++|+++++.|.+
T Consensus 604 ~~~~~~~-------~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~ 641 (651)
T PLN02736 604 FEFAKAV-------TLVPEPFTVENGLLTPTFKVKRPQAKAYFAK 641 (651)
T ss_pred ceeeeEE-------EEeCCCCcCCCCcCChhhhhhHHHHHHHHHH
Confidence 9999997 2335554 899999999999998754
|
|
| >PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-63 Score=638.64 Aligned_cols=490 Identities=16% Similarity=0.191 Sum_probs=390.5
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++...|.+.+. ++|+++|+.. ...+++||+||.++++++|+.|.+. +||+|+|+++|++++++++|
T Consensus 19 ~~~~~~~~~~~~-----~~p~~~a~~~----~~~~~~Ty~el~~~~~~lA~~L~~~----~gd~Val~~~n~~e~~~~~l 85 (539)
T PRK06334 19 KTVLESFLKLCS-----EMTTATVCWD----EQLGKLSYNQVRKAVIALATKVSKY----PDQHIGIMMPASAGAYIAYF 85 (539)
T ss_pred CcHHHHHHHHHH-----hCCCceEEEe----CCCCcccHHHHHHHHHHHHHHHhhc----cCCeEEEEcCCchHHHHHHH
Confidence 345666666654 7799999872 2336899999999999999999763 89999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc------cccccccCC------cccc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS------NVVDIKSWP------TILD 1310 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~------~~~~~~~~~------~~~~ 1310 (1761)
||+++|+++|||+|.+|.+ ++.+++++++++++|++......+...... ..+...... ....
T Consensus 86 A~~~~G~v~vpl~~~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 159 (539)
T PRK06334 86 ATLLSGKIPVMINWSQGLR------EVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCR 159 (539)
T ss_pred HHHhcCCeeEecCcccchH------HHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhh
Confidence 9999999999999988887 999999999999999998766554432110 011000000 0000
Q ss_pred CC---CCccch--hhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhH
Q psy14338 1311 TD---DMPKKK--LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGF 1385 (1761)
Q Consensus 1311 ~~---~~~~~~--~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1385 (1761)
.. ..+... .........+++++||+|||||||.||||+++|+++.+...+....+++.++|+++.++|++|.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~ 239 (539)
T PRK06334 160 IGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGF 239 (539)
T ss_pred hhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhh
Confidence 00 000000 0000124567999999999999999999999999999998888888899999999999999998888
Q ss_pred HHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecC
Q psy14338 1386 ALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAE 1465 (1761)
Q Consensus 1386 ~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe 1465 (1761)
...++.++.+|+++++... .+++..+++.|+++++|+++++|++++.|++.. .....++++||.+++||+
T Consensus 240 ~~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~lr~i~~gG~ 309 (539)
T PRK06334 240 NSCTLFPLLSGVPVVFAYN---PLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTA-------KKQESCLPSLRFVVIGGD 309 (539)
T ss_pred HHHHHHHHHcCCeEEEecC---CCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhh-------hhcccccccccEEEECCc
Confidence 6668899999999998764 378999999999999999999999999997632 123456889999999999
Q ss_pred CCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccc
Q psy14338 1466 ERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGK 1545 (1761)
Q Consensus 1466 ~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 1545 (1761)
++++ .+.+++.+.++. ..+++.||+||++.++....... + ....++|+
T Consensus 310 ~l~~-~~~~~~~~~~~~-----~~i~~~YG~TE~~~~~~~~~~~~------------------------~--~~~~~vG~ 357 (539)
T PRK06334 310 AFKD-SLYQEALKTFPH-----IQLRQGYGTTECSPVITINTVNS------------------------P--KHESCVGM 357 (539)
T ss_pred cCCH-HHHHHHHHHCCC-----CeEEecccccccCceEEeccCCC------------------------C--CCCCcCce
Confidence 9999 888888877642 57999999999875543221100 0 01235999
Q ss_pred ccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCC
Q psy14338 1546 LLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAG 1625 (1761)
Q Consensus 1546 p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d 1625 (1761)
|++|++++|+|+++++++|.|+.|||+|+|+++++|||| +|+.+. |.. .+++|||+|||+|++ |
T Consensus 358 p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~---~~~~~~--~~~-----~~~~~w~~TGD~g~~------d 421 (539)
T PRK06334 358 PIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLG---EDFGQG--FVE-----LGGETWYVTGDLGYV------D 421 (539)
T ss_pred ecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccC---Cccccc--cee-----eCCceeEECCCEEEE------C
Confidence 999999999998778999999999999999999999999 888654 321 135789999999999 9
Q ss_pred CCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcce------eEEEeeCC---eEEEEEEeCCC
Q psy14338 1626 VAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAE------CAVFTWTN---LLVVVVELDGN 1696 (1761)
Q Consensus 1626 ~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~------a~Vv~~~~---~~~a~v~~~~~ 1696 (1761)
+| |+ ++|+||+||+||++|+||+|.|||+ +|.+||+|.+ ++|++..+ .++++++..
T Consensus 422 ~~--------G~----l~~~GR~~d~ik~~G~~v~p~eIE~-~l~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~-- 486 (539)
T PRK06334 422 RH--------GE----LFLKGRLSRFVKIGAEMVSLEALES-ILMEGFGQNAADHAGPLVVCGLPGEKVRLCLFTTFP-- 486 (539)
T ss_pred CC--------Ce----EEEEeccCCeEEECCEEECHHHHHH-HHHHccCCccccccCceEEEcCCCCceEEEEEEecc--
Confidence 99 99 9999999999999999999999999 8999999997 67776543 344444422
Q ss_pred chhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1697 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1697 ~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
.+.++++++|+++.++ .||+|+.+++++ +||+|+||||||++|++...
T Consensus 487 -~~~~~~~~~l~~~~~~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~ 534 (539)
T PRK06334 487 -TSISEVNDILKNSKTS-SILKISYHHQVE--SIPMLGTGKPDYCSLNALAK 534 (539)
T ss_pred -CChHHHHHHHHhcCCc-ccccchheeeec--ccccccCCcccHHHHHHHHH
Confidence 3457899999885466 899999999999 99999999999999998753
|
|
| >TIGR02316 propion_prpE propionate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-62 Score=642.78 Aligned_cols=499 Identities=17% Similarity=0.213 Sum_probs=391.4
Q ss_pred CCCCCCCceEEccCC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1179 AGAPVPPGVSSVDTR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
+++|+++|+++.+.. ..++++||+||+++++++|+.|++. |+++||+|+|+++|++++++++|||+++|++++|++|.
T Consensus 63 ~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~ 141 (628)
T TIGR02316 63 DERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRAL-GVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGG 141 (628)
T ss_pred CcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCC
Confidence 367999999864421 2457899999999999999999999 99999999999999999999999999999999999998
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHH---------HHHhh----hc--cccccccccC-Ccc--ccCCCCc----
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI---------KLLKS----KE--ASNVVDIKSW-PTI--LDTDDMP---- 1315 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~---------~~~~~----~~--~~~~~~~~~~-~~~--~~~~~~~---- 1315 (1761)
++.+ ++.+++++++++++|++.... ..+.. .. ...++..... ... .......
T Consensus 142 ~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 215 (628)
T TIGR02316 142 FASH------SLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPGRDVDYAAL 215 (628)
T ss_pred CCHH------HHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCccccHHHH
Confidence 8877 999999999999999975321 11111 00 0001111000 000 0000000
Q ss_pred -cc--hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHH-HHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1316 -KK--KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVT-SLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1316 -~~--~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
.. ....+.....+++++||+|||||||+||||+++|+++. +........+++.++|+++...++.|..+..+.++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~ 295 (628)
T TIGR02316 216 RTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYA 295 (628)
T ss_pred hhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHH
Confidence 00 00011112467899999999999999999999999975 445566677899999998888888888887677899
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+|+.|+++++.+.....+++..+++.|+++++|+++++|++++.|.+... ......++++||.+++|||++++ .
T Consensus 296 ~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-----~~~~~~~l~~lr~~~~gGe~l~~-~ 369 (628)
T TIGR02316 296 PLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDA-----AWLRKHDLSSLHWLFLAGEPLDE-P 369 (628)
T ss_pred HHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCC-----cccccCCccceeEEEEecCCCCH-H
Confidence 99999999998754335689999999999999999999999998865311 11234578999999999999998 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+.++ ..+++.||+||++..++....... ....+.+++|+|++|++
T Consensus 370 ~~~~~~~~~~------~~~~~~yG~TE~~~~~~~~~~~~~-----------------------~~~~~~gs~G~p~~g~~ 420 (628)
T TIGR02316 370 TAHWITDGLG------KPVIDNYWQTETGWPVLAIMPGLD-----------------------LKPVKLGSPGLPMYGYH 420 (628)
T ss_pred HHHHHHHHhC------CCEEecccccccCceeecCCCCCC-----------------------cCCCCCCCcccCcCCce
Confidence 7777777664 468999999998643222111000 00112346899999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcCC---cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQSP---HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g~---~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
++|+|+++++++|.|+.|||+|+|| +++.|||| +++.+.+.|... .+++||+|||+|++ |+|
T Consensus 421 v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~---~~~~~~~~~~~~-----~~~~~~~TGD~g~~------d~d- 485 (628)
T TIGR02316 421 LRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWG---DDARFLKTYWSH-----FKRPLYSSFDWGIR------DED- 485 (628)
T ss_pred EEEEECCCCCCCCCCCcEEEEEecCCCccccccccC---ChHHHHHhhhhc-----CCCCEEECCceEEE------cCC-
Confidence 9999986799999999999999998 67899999 887776665321 24689999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc------
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE------ 1697 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~------ 1697 (1761)
|+ ++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.+++||+.....
T Consensus 486 -------G~----l~i~GR~dd~ik~~G~rv~~~eIE~-~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~ 553 (628)
T TIGR02316 486 -------GY----TFILGRTDDVINVAGHRLGTREIEE-SVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAH 553 (628)
T ss_pred -------Cc----EEEEEcCcceEEeCCEEeCHHHHHH-HHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCccccccc
Confidence 99 9999999999999999999999999 8999999999999974 45788888864321
Q ss_pred ---hhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1698 ---SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1698 ---~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
...++|+++++++ |+ .||+|+.|++++ +||+|+|||++|++|++.+.+.
T Consensus 554 ~~~~~~~~i~~~~~~~-L~-~~~~P~~v~~v~--~lP~t~sGKi~r~~L~~~~~~~ 605 (628)
T TIGR02316 554 DPHAVETGMMDCVVRQ-LG-AVARPARVYFVA--ALPKTRSGKLLRRSIQALAEGR 605 (628)
T ss_pred chHHHHHHHHHHHHHh-cC-CCcCCCEEEEcC--CCCCCCchHHHHHHHHHHHcCC
Confidence 2356899999987 88 999999999999 9999999999999999987543
|
This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-63 Score=711.10 Aligned_cols=504 Identities=16% Similarity=0.202 Sum_probs=414.7
Q ss_pred cCCCCcccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCC
Q psy14338 1154 TGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPP 1233 (1761)
Q Consensus 1154 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~ 1233 (1761)
|.+..+....++++.|.+++. ++|+++|++ ++++.+||+||+++++++|+.|.+. |+++|++|+|+++|
T Consensus 449 ~~~~~~~~~~~l~~~~~~~~~-----~~p~~~Al~-----~~~~~~Ty~eL~~~~~~la~~L~~~-g~~~g~~V~l~~~~ 517 (1296)
T PRK10252 449 NATAVEIPETTLSALVAQQAA-----KTPDAPALA-----DARYQFSYREMREQVVALANLLRER-GVKPGDSVAVALPR 517 (1296)
T ss_pred cCCCCCCCcCCHHHHHHHHHH-----hCCCCeEEE-----cCCCcEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCC
Confidence 444444445677888877765 779999999 6788999999999999999999999 99999999999999
Q ss_pred CHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCC
Q psy14338 1234 GIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDD 1313 (1761)
Q Consensus 1234 s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1313 (1761)
++++++++|||+++|++||||||.+|.+ |+.+++++++++++|++......+......... .+......
T Consensus 518 ~~~~i~~~la~~~~G~~~vpld~~~p~~------~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~-- 586 (1296)
T PRK10252 518 SVFLTLALHAIVEAGAAWLPLDTGYPDD------RLKMMLEDARPSLLITTADQLPRFADVPDLTSL---CYNAPLAP-- 586 (1296)
T ss_pred CHHHHHHHHHHHHhCCEEEecCccCHHH------HHHHHHHhCCCCEEEECcchhhhcccCCCceee---eccccccc--
Confidence 9999999999999999999999999988 999999999999999998765544332111110 01100000
Q ss_pred CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHh
Q psy14338 1314 MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSV 1393 (1761)
Q Consensus 1314 ~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L 1393 (1761)
..........++++|||+|||||||+||||+++|+++++.+.+....+++.++|+++...+++|+.+. +++|.+|
T Consensus 587 ----~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l 661 (1296)
T PRK10252 587 ----QGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSV-WEFFWPF 661 (1296)
T ss_pred ----ccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhH-HHHHHHH
Confidence 00011122367899999999999999999999999999999999999999999999999999888876 7899999
Q ss_pred hcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHH
Q psy14338 1394 YSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473 (1761)
Q Consensus 1394 ~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~ 1473 (1761)
++|+++++.++. ...++..+++.|++++||++.++|+++..+++.... ......+++||.+++|||++++ .+.
T Consensus 662 ~~G~~l~~~~~~-~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~-----~~~~~~~~~lr~i~~gGe~l~~-~~~ 734 (1296)
T PRK10252 662 IAGAKLVMAEPE-AHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTP-----EGARQSCASLRQVFCSGEALPA-DLC 734 (1296)
T ss_pred hCCCEEEECChh-ccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcc-----ccccccCCCccEEEEecCCCCH-HHH
Confidence 999999998753 357999999999999999999999999988764211 1112346889999999999999 787
Q ss_pred HHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEE
Q psy14338 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVI 1553 (1761)
Q Consensus 1474 ~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 1553 (1761)
++|.+.++ ..++|.||+||++..++........ .. .......+||+|++|++++
T Consensus 735 ~~~~~~~~------~~l~n~YG~TE~~~~~~~~~~~~~~---------~~-----------~~~~~~~~iG~p~~~~~~~ 788 (1296)
T PRK10252 735 REWQQLTG------APLHNLYGPTEAAVDVSWYPAFGEE---------LA-----------AVRGSSVPIGYPVWNTGLR 788 (1296)
T ss_pred HHHHhcCC------CEEEeCCCcchhhheeeeeeccccc---------cc-----------ccCCCCCCcccccCCCEEE
Confidence 87776542 5799999999987644322110000 00 0001235699999999999
Q ss_pred EEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCC
Q psy14338 1554 IANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633 (1761)
Q Consensus 1554 v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~ 1633 (1761)
|+|+ .++++|.|++|||+|+|+++++||+| +|++|+++|+.+||. ++++||||||+|++ ++|
T Consensus 789 i~d~-~~~~~~~g~~Gel~i~g~~~~~GY~~---~~~~t~~~f~~~~~~--~~~~~y~TGDl~~~------~~~------ 850 (1296)
T PRK10252 789 ILDA-RMRPVPPGVAGDLYLTGIQLAQGYLG---RPDLTASRFIADPFA--PGERMYRTGDVARW------LDD------ 850 (1296)
T ss_pred EECC-CCCCCCCCCceEEEecccccchhhCC---CcccchhhcccCCCC--CCCEEEecCceEEE------cCC------
Confidence 9995 48999999999999999999999999 999999999999986 46799999999999 999
Q ss_pred CCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee---------CC--eEEEEEEeCC-CchhHh
Q psy14338 1634 GVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW---------TN--LLVVVVELDG-NESEAL 1701 (1761)
Q Consensus 1634 g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~---------~~--~~~a~v~~~~-~~~~~~ 1701 (1761)
|+ ++|+||+|+|||++|+||+|.|||+ +|.+||+|.+|+|+.. ++ .+++||+... ...+.+
T Consensus 851 --G~----l~~~GR~d~~ik~~G~ri~~~eIE~-~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~ 923 (1296)
T PRK10252 851 --GA----VEYLGRSDDQLKIRGQRIELGEIDR-AMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTS 923 (1296)
T ss_pred --Cc----EEEecccCCeEEEeeEEecHHHHHH-HHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHH
Confidence 99 9999999999999999999999999 8999999999987642 22 6888888643 345678
Q ss_pred hHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHH
Q psy14338 1702 DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 1746 (1761)
Q Consensus 1702 ~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~ 1746 (1761)
+|+++++++ || .||+|..++.++ +||+|+|||+||++|++.
T Consensus 924 ~l~~~l~~~-Lp-~~~~P~~~~~~~--~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 924 ALQAQLRER-LP-PHMVPVVLLQLD--QLPLSANGKLDRKALPLP 964 (1296)
T ss_pred HHHHHHHhh-Cc-hhcCCcEEEEec--CCCCCCCcChhHHhcCCC
Confidence 999999987 98 999999999999 999999999999999864
|
|
| >PRK10524 prpE propionyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-62 Score=645.46 Aligned_cols=511 Identities=17% Similarity=0.195 Sum_probs=401.5
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
..+++|+++++.+|+++|+++.+..+...+.+||+||.++++++|+.|+ +.|+++||+|+++++|+ ++++
T Consensus 54 ~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e~~ 123 (629)
T PRK10524 54 LCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLR--------SLGVQRGDRVLIYMPMI--AEAA 123 (629)
T ss_pred HHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHHH
Confidence 4688899999999999999986432222368999999999999999999 88999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc---------Cccc------ccccceeccC
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG---------LPKT------AAGEVVAFKG 226 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~---------~~~~------~~~~~~~~~~ 226 (1761)
+++|||+++|++++|++|.++.+ ++.+++++++++++|+++..... +... ....++....
T Consensus 124 ~~~lA~~~~Gav~v~~~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 198 (629)
T PRK10524 124 FAMLACARIGAIHSVVFGGFASH-----SLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDR 198 (629)
T ss_pred HHHHHHHHhCcEEEeeCCCCCHH-----HHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 99999999999999999999976 89999999999999997643211 0000 0011111111
Q ss_pred C-Cccee------EEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHH-HHHHHHcCCCCCCeE
Q psy14338 227 W-PKLTW------FVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHC-RALTQACHYTEGENM 298 (1761)
Q Consensus 227 ~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~-~~~~~~~~~~~~d~~ 298 (1761)
. ..... ...+..........+.....+++++||+|||||||+||||+++|++++... ......+++.++|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~ 278 (629)
T PRK10524 199 GLAPMARVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETF 278 (629)
T ss_pred CCCCcCcccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEE
Confidence 0 00000 000000000011111222467899999999999999999999999975443 445556789999999
Q ss_pred EEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCce
Q psy14338 299 VCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSL 376 (1761)
Q Consensus 299 l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~L 376 (1761)
++.++++|+++....++.+|+.|+++++.+......++..+++.|+++++|++.++| +++..+..... ....++++|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~l~~l 357 (629)
T PRK10524 279 FCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAP-TAIRVLKKQDPALLRKHDLSSL 357 (629)
T ss_pred EEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCH-HHHHHHHhcCcccccccChhhe
Confidence 999999999887556899999999999987433356899999999999999999986 47766655332 234568899
Q ss_pred eEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEe-ecCCCCCcccCCCccccccCcccceeeecCC
Q psy14338 377 RLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSV-RRPGRAGVNATGRGVLSMSGLSYGVVRVDQE 455 (1761)
Q Consensus 377 r~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 455 (1761)
|.+++| ||++++++.+++.+.+ |.+ ++|.||+||++...+ ..+..
T Consensus 358 r~i~~~--Ge~l~~~~~~~~~~~~---~~~---v~~~YG~TE~~~~~~~~~~~~-------------------------- 403 (629)
T PRK10524 358 RALFLA--GEPLDEPTASWISEAL---GVP---VIDNYWQTETGWPILAIARGV-------------------------- 403 (629)
T ss_pred eEEEEe--CCCCCHHHHHHHHHhc---CCC---eEeccccccccchhhcCCCCc--------------------------
Confidence 999999 9999999999888877 443 999999999973222 11100
Q ss_pred CccCcccccccCCCCCCcEEEEEeC-CCCcccCCCCCceEEEEecC---CccccccCCCccccccccccccccCCCccCC
Q psy14338 456 NSLTSLTLQDCGQVMPGCIMTVVKM-DSPSYLCKTDEVGEICVAST---GTGSQYWGLPGLSNTTFKVTPLLADGTALSQ 531 (1761)
Q Consensus 456 ~~~~~~~~~~iG~p~~~~~~~I~d~-~~~~~~~p~G~~GEL~i~G~---~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~ 531 (1761)
.....+.+++|+|++|++++|+|+ +++ ++|.|+.|||+|+|| ++++|||++++.+.+.|.... +
T Consensus 404 -~~~~~~~~~~G~p~~g~~~~i~d~~~g~--~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~---------~ 471 (629)
T PRK10524 404 -EDRPTRLGSPGVPMYGYNVKLLNEVTGE--PCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLF---------G 471 (629)
T ss_pred -ccCcCCCCCcccCcCCceEEEEeCCCCC--CCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccC---------C
Confidence 000123578999999999999999 776 589999999999998 688999999987776653221 2
Q ss_pred CceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC
Q psy14338 532 DTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP 610 (1761)
Q Consensus 532 ~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~ 610 (1761)
++||+|||+|++++||+++|+||+||+||++|+||+|.|||++|.+++.| .+++|+++++. .++.+++|++...
T Consensus 472 ~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V-----~e~~vvg~~d~~~g~~~~~~vv~~~ 546 (629)
T PRK10524 472 RQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAV-----AEVAVVGVKDALKGQVAVAFVVPKD 546 (629)
T ss_pred CcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCc-----ceEEEEccccCCCCeEEEEEEEECC
Confidence 68999999999999999999999999999999999999999999998888 69999999864 6788999998765
Q ss_pred CC----------CHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 611 DC----------SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 611 ~~----------~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+. ..++++++++++|+.|++|..| +.+++||+|+|||++|++|++.+..
T Consensus 547 ~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i-------~~v~~lP~T~sGKi~R~~L~~~~~~ 605 (629)
T PRK10524 547 SDSLADREARLALEKEIMALVDSQLGAVARPARV-------WFVSALPKTRSGKLLRRAIQAIAEG 605 (629)
T ss_pred CCccccccchHHHHHHHHHHHHhhcCCCcCCCEE-------EEcCCCCCCCCcchHHHHHHHHHcC
Confidence 42 1467899999999999999986 5569999999999999999988653
|
|
| >PRK04319 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-62 Score=639.28 Aligned_cols=499 Identities=20% Similarity=0.242 Sum_probs=410.5
Q ss_pred hhHHHHHHHHhh-hcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGS-ATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~-~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++++++++++ .+|+++|+.+.+.++. +++||+||.++++++|..|+ +.|+++|++|+++++|+ ++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Ty~el~~~v~~~A~~L~--------~~gv~~gd~V~i~~~n~--~~ 110 (570)
T PRK04319 43 NIAYEAIDRHADGGRKDKVALRYLDASRK--EKYTYKELKELSNKFANVLK--------ELGVEKGDRVFIFMPRI--PE 110 (570)
T ss_pred eHHHHHHHHhhccCCCCceEEEEECCCCc--eeecHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCC--HH
Confidence 457788888887 4799999998654332 68999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc--c-ccceeccCCCc--ce-eE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA--A-GEVVAFKGWPK--LT-WF 233 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~--~-~~~~~~~~~~~--~~-~~ 233 (1761)
+++++|||+++|++++|+++.++.+ ++.+++++++++++|+++.......... . ..++....... .. ..
T Consensus 111 ~~~~~la~~~~G~v~vpl~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (570)
T PRK04319 111 LYFALLGALKNGAIVGPLFEAFMEE-----AVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLD 185 (570)
T ss_pred HHHHHHHHHHcCcEEcccccccCHH-----HHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccC
Confidence 9999999999999999999999976 8999999999999999877544322110 0 01111111000 00 00
Q ss_pred EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHH
Q psy14338 234 VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHS 313 (1761)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 313 (1761)
..+...... .........+++++||+|||||||.||||+++|+++++.+......+++.++|+++..+|++|..+....
T Consensus 186 ~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~ 264 (570)
T PRK04319 186 FNALMEQAS-DEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYG 264 (570)
T ss_pred HHHHHhhcC-CcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHH
Confidence 001111111 1112233567899999999999999999999999999988888888899999999999999999987656
Q ss_pred HHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeEEEecCCCccCCHH
Q psy14338 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRLLLVGDGANPWSLS 391 (1761)
Q Consensus 314 i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~v~~gg~Ge~l~~~ 391 (1761)
++.+|+.|+++++.+. .+++..+++.|+++++|+++.+|+ ++..++.... ....++++||.+++| |++++++
T Consensus 265 ~~~~l~~G~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~~~lr~~~~g--G~~l~~~ 338 (570)
T PRK04319 265 IFAPWLNGATNVIDGG---RFSPERWYRILEDYKVTVWYTAPT-AIRMLMGAGDDLVKKYDLSSLRHILSV--GEPLNPE 338 (570)
T ss_pred HHHHHhcCceEEEECC---CCCHHHHHHHHHHcCCeEEEeCHH-HHHHHHhcCCcccccCCcccceEEEEc--ccCCCHH
Confidence 9999999999999874 679999999999999999999964 7777765432 234567899999999 9999999
Q ss_pred HHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCC
Q psy14338 392 SCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP 471 (1761)
Q Consensus 392 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 471 (1761)
+.+++.+.+ |.+ +++.||+||++..++..... ....++++|+|++
T Consensus 339 ~~~~~~~~~---g~~---i~~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~~G~p~~ 383 (570)
T PRK04319 339 VVRWGMKVF---GLP---IHDNWWMTETGGIMIANYPA-----------------------------MDIKPGSMGKPLP 383 (570)
T ss_pred HHHHHHHHh---CCC---eEeceeecccCCEEEecCCC-----------------------------CCCCCCcCcCCCC
Confidence 999999887 543 99999999998655432210 0123568999999
Q ss_pred CcEEEEEeCCCCcccCCCCCceEEEEec--CCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeE
Q psy14338 472 GCIMTVVKMDSPSYLCKTDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLV 549 (1761)
Q Consensus 472 ~~~~~I~d~~~~~~~~p~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l 549 (1761)
|++++|+|++++ ++|.|+.|||+|+| +++++||+|+|+.|++.|. ++||+|||+|++++||++
T Consensus 384 g~~~~i~d~~~~--~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~-------------~gw~~TGDl~~~~~~g~l 448 (570)
T PRK04319 384 GIEAAIVDDQGN--ELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFA-------------GDWYVSGDSAYMDEDGYF 448 (570)
T ss_pred CCEEEEECCCCC--CCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhc-------------CCceEeCcEEEECCCeeE
Confidence 999999999987 47999999999997 8999999999999999985 689999999999999999
Q ss_pred EEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCC-----HHHHHHHHHH
Q psy14338 550 FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCS-----EEESFQWMSR 623 (1761)
Q Consensus 550 ~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~-----~~~l~~~l~~ 623 (1761)
+|+||+||+||++|++|+|.|||+.+.+++.| .+++|++.++ ..++.++++++..++.. .++++++|++
T Consensus 449 ~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V-----~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~ 523 (570)
T PRK04319 449 WFQGRVDDVIKTSGERVGPFEVESKLMEHPAV-----AEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKK 523 (570)
T ss_pred EEEecCCCEEEECCEEECHHHHHHHHhhCCCe-----eecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888 7999999885 46788999998776532 2578999999
Q ss_pred HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 624 VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 624 ~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+|+.|++|..+ +.+++||+|++||++|++|+++..
T Consensus 524 ~l~~~~~P~~i-------~~v~~iP~t~~GKv~r~~L~~~~~ 558 (570)
T PRK04319 524 GLGAHAAPREI-------EFKDKLPKTRSGKIMRRVLKAWEL 558 (570)
T ss_pred hcccccCCcEE-------EEeCCCCCCCchhhhHHHHHHHHh
Confidence 99999999986 556999999999999999998864
|
|
| >PLN02246 4-coumarate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-62 Score=634.75 Aligned_cols=504 Identities=18% Similarity=0.253 Sum_probs=410.8
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.+++.++++++|+++|+++.+ ++ +++||+||.++++++|+.|+ +.|+++|++|+++++|+ .++
T Consensus 23 ~~~~~~l~~~~~~~~~~~a~~~~~-~~---~~~ty~el~~~~~~la~~L~--------~~g~~~gd~V~i~~~~~--~~~ 88 (537)
T PLN02246 23 LPLHDYCFERLSEFSDRPCLIDGA-TG---RVYTYADVELLSRRVAAGLH--------KLGIRQGDVVMLLLPNC--PEF 88 (537)
T ss_pred CcHHHHHHHHHHhCCCCeEEEecC-CC---ceeeHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCC--hHH
Confidence 468999999999999999998643 22 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc---ccceeccCCCcceeEEecc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA---GEVVAFKGWPKLTWFVTEH 237 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 237 (1761)
++++|||+++|++++|+||.++.+ ++..++++++++++|+++...+.+..... ..++..+......+...+.
T Consensus 89 ~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (537)
T PLN02246 89 VLAFLGASRRGAVTTTANPFYTPA-----EIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSEL 163 (537)
T ss_pred HHHHHHHHHcCEEEecCCCCCCHH-----HHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHH
Confidence 999999999999999999999976 89999999999999998765543322110 0111111110000000000
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH----HcCCCCCCeEEEccCCcchhhhHHH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ----ACHYTEGENMVCVLDFKRETGLWHS 313 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~ 313 (1761)
... .....+.....+++++|++|||||||+||||+++|+++.+.+.+... .+++.++|+++..+|++|+.++...
T Consensus 164 ~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~ 242 (537)
T PLN02246 164 TQA-DENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSV 242 (537)
T ss_pred hcC-CCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHH
Confidence 111 11111223356899999999999999999999999999887765433 4678999999999999999998765
Q ss_pred HHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 314 i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
++.++..|+++++.+ .+++..+++.|+++++|++.++|+ ++..++........+++++|.+++| |+++++++.
T Consensus 243 ~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~-~~~~l~~~~~~~~~~~~~lr~~~~g--g~~l~~~~~ 315 (537)
T PLN02246 243 LLCGLRVGAAILIMP----KFEIGALLELIQRHKVTIAPFVPP-IVLAIAKSPVVEKYDLSSIRMVLSG--AAPLGKELE 315 (537)
T ss_pred HHHHHhcCCEEEEeC----CCCHHHHHHHHHHhCceEEEcchH-HHHHHhcCccccccCccceeEEEEe--cCcCCHHHH
Confidence 788999999999998 678999999999999999999975 7777776655555667899999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
+.|.+.++.. .+++.||+||++.+++...... ......++.++|+|++++
T Consensus 316 ~~~~~~~~~~-----~~~~~YG~tE~~~~~~~~~~~~-------------------------~~~~~~~~~~~G~~~~~~ 365 (537)
T PLN02246 316 DAFRAKLPNA-----VLGQGYGMTEAGPVLAMCLAFA-------------------------KEPFPVKSGSCGTVVRNA 365 (537)
T ss_pred HHHHHHcCCC-----eEeccccccccCcccccccccC-------------------------CCCccccCCccccccCCc
Confidence 9999987532 4899999999986544321100 000012356899999999
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
+++|+|++.. .++|.|+.|||+|+|++++.||+++|+.|+++|. .++||+|||+|++++||.++|+|
T Consensus 366 ~~~i~d~~~~-~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~------------~~~~~~TGD~~~~~~~g~l~~~G 432 (537)
T PLN02246 366 ELKIVDPETG-ASLPRNQPGEICIRGPQIMKGYLNDPEATANTID------------KDGWLHTGDIGYIDDDDELFIVD 432 (537)
T ss_pred EEEEecCCCC-CcCCCCCceEEEEECCchhccccCCchhhhhccc------------CCCCeeecceEEEeCCCeEEEEe
Confidence 9999996433 2699999999999999999999999999998873 37899999999999999999999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhh
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVLQAVDS 630 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~ 630 (1761)
|+||+||++|+||+|.|||+.+.+++.| .+++|++.++. .++.++++++..++ .+.++++++|+++|+.||+
T Consensus 433 R~dd~i~~~G~~i~~~eIE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~ 507 (537)
T PLN02246 433 RLKELIKYKGFQVAPAELEALLISHPSI-----ADAAVVPMKDEVAGEVPVAFVVRSNGSEITEDEIKQFVAKQVVFYKR 507 (537)
T ss_pred cccceEEECCEEECcHHHHHHHHhCCCe-----eEEEEEcccCccCCceeEEEEEeCCCCCCCHHHHHHHHHhhCcCccc
Confidence 9999999999999999999999998888 79999988754 56788999887654 5678999999999999999
Q ss_pred cceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 631 IHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 631 P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
|..+ +.+++||+|++||++|++|++.+.+
T Consensus 508 p~~i-------~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 508 IHKV-------FFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred cceE-------EEeccCCCCCcchhhHHHHHHHHhc
Confidence 9986 4569999999999999999998754
|
|
| >PLN02614 long-chain acyl-CoA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-63 Score=651.72 Aligned_cols=506 Identities=14% Similarity=0.167 Sum_probs=383.1
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEEC---CCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCc
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLD---PNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDP 157 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d---~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~ 157 (1761)
.++.++|+++++++||++|+.+.+ ++..+.+.+||+||+++++++|+.|+ +.|+++||+|+|+++|+
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~--------~~Gv~~Gd~Vai~~~n~-- 114 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLR--------SVGVKDEAKCGIYGANS-- 114 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--
Confidence 489999999999999999998642 11111246899999999999999999 89999999999999999
Q ss_pred hhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc------cccceeccCCC---
Q psy14338 158 INFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA------AGEVVAFKGWP--- 228 (1761)
Q Consensus 158 ~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~------~~~~~~~~~~~--- 228 (1761)
++|++++|||+++|+++|||+|.++.+ ++.+++++++++++|++......+.... ...++..+...
T Consensus 115 ~e~~~~~lA~~~~Gav~vpl~~~~~~~-----~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~ 189 (666)
T PLN02614 115 PEWIISMEACNAHGLYCVPLYDTLGAG-----AVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQ 189 (666)
T ss_pred HHHHHHHHHHHHcCCEEEEecCCCCHH-----HHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHH
Confidence 999999999999999999999999977 8999999999999999875432221100 01112111100
Q ss_pred -------cceeEE-eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc-----CCCCC
Q psy14338 229 -------KLTWFV-TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC-----HYTEG 295 (1761)
Q Consensus 229 -------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~ 295 (1761)
...... .+................++|+|+|+|||||||.||||++||+|+++.+.+....+ +++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~ 269 (666)
T PLN02614 190 KEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVK 269 (666)
T ss_pred hhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCC
Confidence 000000 11111101011112234689999999999999999999999999998877665543 57889
Q ss_pred CeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--------
Q psy14338 296 ENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD-------- 367 (1761)
Q Consensus 296 d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~-------- 367 (1761)
|++++++|++|.++... .+..++.|+++++.+ +++..+++.|+++++|+++++|. ++..++....
T Consensus 270 d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~-~~~~l~~~~~~~~~~~~~ 342 (666)
T PLN02614 270 DVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-----GDVKLLIEDLGELKPTIFCAVPR-VLDRVYSGLQKKLSDGGF 342 (666)
T ss_pred cEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCeEEEecHH-HHHHHHHHHHHHHhccCH
Confidence 99999999999998864 677788999998875 37899999999999999999964 7665542100
Q ss_pred -----------------------C--CC-----------CCC-CceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcc
Q psy14338 368 -----------------------H--KD-----------ISL-SSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAI 410 (1761)
Q Consensus 368 -----------------------~--~~-----------~~l-~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l 410 (1761)
. .+ ..+ ++||.+++| |+++++. +.+|.+.++ ++ .+
T Consensus 343 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~G--ga~l~~~-~~~~~~~~~--~~---~i 414 (666)
T PLN02614 343 LKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSG--AAPLASH-VESFLRVVA--CC---HV 414 (666)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEc--CCCCCHH-HHHHHHHhc--CC---CE
Confidence 0 00 011 689999998 9999976 577777763 23 39
Q ss_pred ccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe-CCCCcccCCC
Q psy14338 411 CPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK-MDSPSYLCKT 489 (1761)
Q Consensus 411 ~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~~~~~~~p~ 489 (1761)
+|+||+||++..++..... ...+.+++|+|+||++++|+| +++...++|.
T Consensus 415 ~~~YG~TE~~~~~~~~~~~-----------------------------~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~ 465 (666)
T PLN02614 415 LQGYGLTESCAGTFVSLPD-----------------------------ELDMLGTVGPPVPNVDIRLESVPEMEYDALAS 465 (666)
T ss_pred EeeCchHhhhhheeeeccc-----------------------------cCCcCCcccCcCCceEEEEeeecccCcccCCC
Confidence 9999999997654432210 012356899999999999998 4432236899
Q ss_pred CCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE-CCcccCh
Q psy14338 490 DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV-TGRKHNA 568 (1761)
Q Consensus 490 G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki-~G~rIe~ 568 (1761)
|+.|||+|+||++++|||++|+.|+++|. +|||||||+|++|+||+|+|+||+||+||+ +|+||+|
T Consensus 466 g~~GEl~vrGp~v~~GY~~~pe~T~~~f~-------------dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p 532 (666)
T PLN02614 466 TPRGEICIRGKTLFSGYYKREDLTKEVLI-------------DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAV 532 (666)
T ss_pred CCCceEEEcCCcccccccCCHHHhhhhhc-------------cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecH
Confidence 99999999999999999999999999994 789999999999999999999999999997 5999999
Q ss_pred HHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC----------C--C------HHH----HHHHH-----
Q psy14338 569 DDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD----------C--S------EEE----SFQWM----- 621 (1761)
Q Consensus 569 ~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~----------~--~------~~~----l~~~l----- 621 (1761)
.|||+.|.+++.| .+|+|++.. ....++|++++... . + ..+ +.+.+
T Consensus 533 ~eIE~~l~~~p~V-----~~~~V~g~~--~~~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 605 (666)
T PLN02614 533 ENIENIYGEVQAV-----DSVWVYGNS--FESFLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVKMAK 605 (666)
T ss_pred HHHHHHHhcCCCe-----eEEEEEecC--CcceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999998887 799999862 23579999987642 0 1 011 22222
Q ss_pred HHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 622 SRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 622 ~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++.|+.|.+++.+.+....|- ++.=-+|+++|+.|+.+.+.|..
T Consensus 606 ~~~l~~~e~i~~~~l~~~~f~-~~ng~lTpt~K~kR~~i~~~y~~ 649 (666)
T PLN02614 606 EKKMKGFEIIKAIHLDPVPFD-MERDLLTPTFKKKRPQLLKYYQS 649 (666)
T ss_pred HcCCCCcceeeEEEEeCCCCC-CcCCcCCHhhhhhHHHHHHHHHH
Confidence 235888999998743332221 23345999999999999988753
|
|
| >PLN02574 4-coumarate--CoA ligase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-62 Score=638.91 Aligned_cols=498 Identities=18% Similarity=0.261 Sum_probs=399.9
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCcccc-CCCCCCCEEEEEccCCCchhH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSE-SSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~-~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+..+|.+ +.+|+++|+++.+. + .++||+||+++++++|+.|+ + .|+++||+|+++++|+ .++
T Consensus 42 ~~~~l~~~--~~~~~~~a~~~~~~-~---~~~Ty~el~~~~~~lA~~L~--------~~~G~~~gd~V~i~~~n~--~~~ 105 (560)
T PLN02574 42 AVSFIFSH--HNHNGDTALIDSST-G---FSISYSELQPLVKSMAAGLY--------HVMGVRQGDVVLLLLPNS--VYF 105 (560)
T ss_pred HHHHHhcC--cccCCCCEEEECCC-C---CcccHHHHHHHHHHHHHHHH--------HHhCCCCCCEEEEECCCc--chH
Confidence 34566665 57899999986442 2 37999999999999999999 7 8999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCc-----ceeEEe
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPK-----LTWFVT 235 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 235 (1761)
++++|||+++|++++|++|.++.+ ++.++++++++++++++......+..... .++....... ..+...
T Consensus 106 ~~~~la~~~~G~v~v~l~p~~~~~-----~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PLN02574 106 PVIFLAVLSLGGIVTTMNPSSSLG-----EIKKRVVDCSVGLAFTSPENVEKLSPLGV-PVIGVPENYDFDSKRIEFPKF 179 (560)
T ss_pred HHHHHHHHHhCeEEeCcCcccCHH-----HHHHHHHhcCCEEEEECHHHHHHHHhcCC-cEEecCcccccccCccCcccH
Confidence 999999999999999999999876 89999999999999998765443322111 1111110000 000000
Q ss_pred ccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH----HcCC-CCCCeEEEccCCcchhhh
Q psy14338 236 EHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ----ACHY-TEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~-~~~d~~l~~~~~~~~~~~ 310 (1761)
+.+..............+++++||+|||||||.||||+++|+++.+.+..+.. .+.. ..+++++..+|++|..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~ 259 (560)
T PLN02574 180 YELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGL 259 (560)
T ss_pred HHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHH
Confidence 00000111111223456799999999999999999999999999987776543 2222 356789999999999998
Q ss_pred HHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCC-CCCCCCceeEEEecCCCccCC
Q psy14338 311 WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDH-KDISLSSLRLLLVGDGANPWS 389 (1761)
Q Consensus 311 ~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~-~~~~l~~Lr~v~~gg~Ge~l~ 389 (1761)
...++.++..|+++++.+ .+++..+++.|+++++|++..+|+ ++..++..... ...++++||.+++| |++++
T Consensus 260 ~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~~lr~~~~g--g~~l~ 332 (560)
T PLN02574 260 SLFVVGLLSLGSTIVVMR----RFDASDMVKVIDRFKVTHFPVVPP-ILMALTKKAKGVCGEVLKSLKQVSCG--AAPLS 332 (560)
T ss_pred HHHHHHHHhcCCEEEEec----CCCHHHHHHHHHHcCCeEEecCCH-HHHHHHhCccccccCccccceEEEEe--cccCC
Confidence 765778888999999987 689999999999999999999975 77777665432 34568899999999 99999
Q ss_pred HHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCC
Q psy14338 390 LSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQV 469 (1761)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 469 (1761)
++++++|.+.++ ++ .+++.||+||++.+++..... .......++|+|
T Consensus 333 ~~~~~~~~~~~~--~~---~v~~~YG~tE~~~~~~~~~~~----------------------------~~~~~~~~vG~~ 379 (560)
T PLN02574 333 GKFIQDFVQTLP--HV---DFIQGYGMTESTAVGTRGFNT----------------------------EKLSKYSSVGLL 379 (560)
T ss_pred HHHHHHHHHHCC--CC---cEEecccccccCceeecCCCc----------------------------cccCCCCceeee
Confidence 999999998875 23 499999999998654422110 001235689999
Q ss_pred CCCcEEEEEeC-CCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 470 MPGCIMTVVKM-DSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 470 ~~~~~~~I~d~-~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
+++++++|+|+ +++ ++|.|+.|||+|+|++++.||+++|+.|++.|. .+|||+|||+|++++||+
T Consensus 380 ~~~~~v~i~d~~~g~--~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~------------~~g~~~TGDlg~~~~~G~ 445 (560)
T PLN02574 380 APNMQAKVVDWSTGC--LLPPGNCGELWIQGPGVMKGYLNNPKATQSTID------------KDGWLRTGDIAYFDEDGY 445 (560)
T ss_pred CCCcEEEEEeCCCCc--CCCCCCCeEEEEECcchhhhhcCChhHhhhhcc------------CCCCcccceEEEEECCCe
Confidence 99999999995 554 699999999999999999999999999999883 378999999999999999
Q ss_pred EEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHH
Q psy14338 549 VFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVL 625 (1761)
Q Consensus 549 l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~L 625 (1761)
++|+||+||+||++|+||++.|||++|.+++.| .+++|++.++ ..++.++++++.+++ .+.++++++++++|
T Consensus 446 l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V-----~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l 520 (560)
T PLN02574 446 LYIVDRLKEIIKYKGFQIAPADLEAVLISHPEI-----IDAAVTAVPDKECGEIPVAFVVRRQGSTLSQEAVINYVAKQV 520 (560)
T ss_pred EEEEecchhheEECCEEECHHHHHHHHHhCCCc-----ceEEEEccccCCCCcceEEEEEeCCCCCCCHHHHHHHHHHhc
Confidence 999999999999999999999999999998888 7999999885 457788999987643 56789999999999
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
+.|+.|..+ +.+++||+|++||++|+.|++.+.+.
T Consensus 521 ~~~~~p~~v-------~~v~~iP~t~~GKi~r~~L~~~~~~~ 555 (560)
T PLN02574 521 APYKKVRKV-------VFVQSIPKSPAGKILRRELKRSLTNS 555 (560)
T ss_pred cCcccCcEE-------EEeeccCCCCcchhhHHHHHHHHhhc
Confidence 999999875 44599999999999999999988654
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-62 Score=707.49 Aligned_cols=512 Identities=17% Similarity=0.197 Sum_probs=402.4
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccC----CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDT----RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDL 1237 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~----~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~ 1237 (1761)
..++++.|.+++. ++|+++|+++.+. ..+++++||+||+++++++|++|++. |+++|++|+|+++|++++
T Consensus 235 ~~~l~~~~~~~a~-----~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-gv~~g~~V~i~~~~~~~~ 308 (1389)
T TIGR03443 235 RGAIHDIFADNAE-----KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKT-GIKRGDVVMIYAYRGVDL 308 (1389)
T ss_pred cCcHHHHHHHHHH-----hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEecCCHHH
Confidence 3577888887775 7799999985432 13568999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH---HHHhhhccc--------cccccccCC
Q psy14338 1238 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI---KLLKSKEAS--------NVVDIKSWP 1306 (1761)
Q Consensus 1238 iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~---~~~~~~~~~--------~~~~~~~~~ 1306 (1761)
++++|||+|+|++||||||.+|.+ ++.+++++++++++|+..... ..+...... ..+......
T Consensus 309 i~~~lA~l~~G~~~vpldp~~p~~------~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (1389)
T TIGR03443 309 VVAVMGVLKAGATFSVIDPAYPPA------RQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDG 382 (1389)
T ss_pred HHHHHHHHhhCcEEeccCCCCcHH------HHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccc
Confidence 999999999999999999999888 999999999999999875421 111110000 000000000
Q ss_pred cc----ccCC--CCcc-c---hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEE
Q psy14338 1307 TI----LDTD--DMPK-K---KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALC 1376 (1761)
Q Consensus 1307 ~~----~~~~--~~~~-~---~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~ 1376 (1761)
.. .... .... . ..........++++|||+|||||||+||||+++|+++++.+.+....+++.++|+++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~ 462 (1389)
T TIGR03443 383 SLVGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTML 462 (1389)
T ss_pred cccccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 00 0000 0000 0 00011123467899999999999999999999999999999999999999999999888
Q ss_pred eCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCc
Q psy14338 1377 LDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGC 1456 (1761)
Q Consensus 1377 ~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~ 1456 (1761)
++++|+.+. +++|.+|+.|+++++++... ..++..+++.|++++||+++++|++++.|... ....+++
T Consensus 463 ~~~~~d~~~-~~i~~~L~~G~~l~~~~~~~-~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~----------~~~~~~~ 530 (1389)
T TIGR03443 463 SGIAHDPIQ-RDMFTPLFLGAQLLVPTADD-IGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQ----------ATTPIPS 530 (1389)
T ss_pred cCceecchH-HHHHHHHhCCCEEEEcChhh-ccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhc----------ccccCCC
Confidence 888888765 78999999999999987533 46899999999999999999999999988642 2345789
Q ss_pred ceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCC-CceeEecccccccCcceecccCCC
Q psy14338 1457 VRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPE-PSCVYVDLRALRNDRVSLVERGSP 1535 (1761)
Q Consensus 1457 Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 1535 (1761)
||.+++|||++++ .+.+++.++++. ..++|.||+||++..++....... ....+. .
T Consensus 531 lr~~~~gGe~l~~-~~~~~~~~~~~~-----~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~-----------------~ 587 (1389)
T TIGR03443 531 LHHAFFVGDILTK-RDCLRLQTLAEN-----VCIVNMYGTTETQRAVSYFEIPSRSSDSTFL-----------------K 587 (1389)
T ss_pred ccEEEEecccCCH-HHHHHHHHhCCC-----CEEEECccCCccceeEEEEEccccccccchh-----------------h
Confidence 9999999999998 676777665432 679999999998765442111000 000000 0
Q ss_pred CccceeccccccCCcEEEEEcCCC-CCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccC-----------
Q psy14338 1536 HSLCLLESGKLLPGVKVIIANPET-KGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTG----------- 1603 (1761)
Q Consensus 1536 ~~~~~~~iG~p~~~~~~~v~d~~~-~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~----------- 1603 (1761)
......++|+|++|++++|+|++. ++++|.|++|||||+|+++++||+| +|++|+++|+.+||..
T Consensus 588 ~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~---~p~~t~~~f~~~~~~~~~~~~~~~~~~ 664 (1389)
T TIGR03443 588 NLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLG---LPELNAEKFVNNWFVDPSHWIDLDKEN 664 (1389)
T ss_pred cccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEecccccchhcCC---ChhHhhhhccCCcccCccccccccccc
Confidence 001235799999999999999653 5799999999999999999999999 9999999999877521
Q ss_pred ---------CCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccC
Q psy14338 1604 ---------NTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKK 1674 (1761)
Q Consensus 1604 ---------~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~ 1674 (1761)
.+++|||||||+|++ ++| |+ |+|+||+|||||++|+||+|+|||+ +|.+||.
T Consensus 665 ~~~~~~~~~~~~~~~y~TGDlg~~------~~d--------G~----l~~~GR~dd~Iki~G~rI~p~eIE~-~l~~~p~ 725 (1389)
T TIGR03443 665 NKPEREFWLGPRDRLYRTGDLGRY------LPD--------GN----VECCGRADDQVKIRGFRIELGEIDT-HLSQHPL 725 (1389)
T ss_pred ccccccccCCCccceeecCCceeE------cCC--------CC----EEEecccCCEEEeCcEEecHHHHHH-HHHhCcc
Confidence 134799999999999 999 99 9999999999999999999999999 8999999
Q ss_pred cceeEEEee-----CCeEEEEEEeCCC--ch-------------------------hHhhHHHHHHHHHhhhcCceeeEE
Q psy14338 1675 IAECAVFTW-----TNLLVVVVELDGN--ES-------------------------EALDLVPLVTNAVLEEHHLIVGVA 1722 (1761)
Q Consensus 1675 V~~a~Vv~~-----~~~~~a~v~~~~~--~~-------------------------~~~~l~~~l~~~~Lp~~~~vP~~i 1722 (1761)
|.+|+|++. ++.+++||++... .. ...+++++++++ || .||+|..|
T Consensus 726 V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Lp-~y~~P~~~ 803 (1389)
T TIGR03443 726 VRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKK-LP-SYAIPTVI 803 (1389)
T ss_pred hheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHHHHHHHHhh-CC-cccCCceE
Confidence 999998763 3468888876411 10 135788999887 98 99999999
Q ss_pred EEECCCCccCCCchhhhHHHHHHH
Q psy14338 1723 VVVDPGVVPINSRGEKQRMHLRDG 1746 (1761)
Q Consensus 1723 ~~v~~~~lP~t~~GKvdR~~L~~~ 1746 (1761)
++++ +||+|+||||||++|++.
T Consensus 804 ~~~~--~lP~t~~GKidr~~L~~~ 825 (1389)
T TIGR03443 804 VPLK--KLPLNPNGKVDKPALPFP 825 (1389)
T ss_pred EEcc--cCCCCCCccccHhhcCCC
Confidence 9999 999999999999999743
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02654 acetate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-61 Score=640.68 Aligned_cols=496 Identities=16% Similarity=0.130 Sum_probs=392.2
Q ss_pred CCCCCCceEEccC-CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1180 GAPVPPGVSSVDT-RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~-~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
.+|+++|+++... ....+++||+||.++++++|+.|++. |+++||+|+|+++|++++++++|||+++|++++|++|.+
T Consensus 101 ~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~ 179 (666)
T PLN02654 101 GNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDV-GVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGF 179 (666)
T ss_pred CCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCC
Confidence 4799999985221 12357999999999999999999999 999999999999999999999999999999999999977
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHH---------Hhhhccc---------cccccccCCcc--ccC-----CC
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKL---------LKSKEAS---------NVVDIKSWPTI--LDT-----DD 1313 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~---------~~~~~~~---------~~~~~~~~~~~--~~~-----~~ 1313 (1761)
+.+ ++.+++++++++++|++...... +...... .++........ ... ..
T Consensus 180 ~~~------~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (666)
T PLN02654 180 SAE------SLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRD 253 (666)
T ss_pred CHH------HHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCc
Confidence 776 99999999999999998753211 1100000 00000000000 000 00
Q ss_pred -----C-ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHH-HHHHHHHHcCcCCCCeEEEEeCCccChhHH
Q psy14338 1314 -----M-PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTS-LCRSMKLACELYPSRHIALCLDPYCGLGFA 1386 (1761)
Q Consensus 1314 -----~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 1386 (1761)
. .............+++++||+|||||||+||||+++|++++. ........+++.++|++++.+++.|.++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~ 333 (666)
T PLN02654 254 VWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHS 333 (666)
T ss_pred ccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhH
Confidence 0 000000111224679999999999999999999999999764 445667788999999999888888888877
Q ss_pred HHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCC
Q psy14338 1387 LWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEE 1466 (1761)
Q Consensus 1387 ~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~ 1466 (1761)
+.++.+|++|+++++.+.....+++..+++.|++++||+++.+|++++.|.+... ......++++||.++++||+
T Consensus 334 ~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-----~~~~~~~l~~Lr~i~~~Ge~ 408 (666)
T PLN02654 334 YVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGD-----EYVTRHSRKSLRVLGSVGEP 408 (666)
T ss_pred HHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCc-----cccccCChhheeEEEEecCC
Confidence 7788999999999999754334689999999999999999999999999976321 11234578899999999999
Q ss_pred CChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccc
Q psy14338 1467 RPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKL 1546 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 1546 (1761)
+++ ++.+++.+. +|.+++.+.+.||+||+++.+....... ...+.+++|+|
T Consensus 409 l~~-~~~~~~~~~---~g~~~~~i~~~yg~TE~g~~~~~~~~~~-------------------------~~~~~gs~G~p 459 (666)
T PLN02654 409 INP-SAWRWFFNV---VGDSRCPISDTWWQTETGGFMITPLPGA-------------------------WPQKPGSATFP 459 (666)
T ss_pred CCH-HHHHHHHHH---hCCCCCceeccccccccCCeeeccCCCC-------------------------CCCCCCccCCC
Confidence 999 666655544 5666778999999999876543221100 00123459999
Q ss_pred cCCcEEEEEcCCCCCCCCCCcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCC
Q psy14338 1547 LPGVKVIIANPETKGQCGDSHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPA 1624 (1761)
Q Consensus 1547 ~~~~~~~v~d~~~~~~~p~G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~ 1624 (1761)
++|++++|+|++ +++++.|+.|||+|+| |++++|||| +++.+.+.|.. ..+|||+|||+|++
T Consensus 460 ~~g~~v~i~d~~-g~~~~~~~~Gel~v~~~~p~~~~gy~~---~~~~~~~~~~~------~~~g~~~TGD~~~~------ 523 (666)
T PLN02654 460 FFGVQPVIVDEK-GKEIEGECSGYLCVKKSWPGAFRTLYG---DHERYETTYFK------PFAGYYFSGDGCSR------ 523 (666)
T ss_pred CCCceEEEECCC-CCCCCCCCceEEEEcCCCchhhhhhcC---ChHHHHHhhhh------cCCCEEEeCceEEE------
Confidence 999999999965 8899999999999999 789999999 99999887732 23689999999999
Q ss_pred CCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC-ch
Q psy14338 1625 GVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN-ES 1698 (1761)
Q Consensus 1625 d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~-~~ 1698 (1761)
|+| |+ ++|+||+||+||++|+||+|.|||+ ++.+||+|.+|+|++. ++.+++||++... ..
T Consensus 524 d~d--------G~----l~i~GR~dd~I~~~G~ri~p~EIE~-~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~ 590 (666)
T PLN02654 524 DKD--------GY----YWLTGRVDDVINVSGHRIGTAEVES-ALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPY 590 (666)
T ss_pred CCC--------Cc----EEEeeeccCeEEeCCEEECHHHHHH-HHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCC
Confidence 999 99 9999999999999999999999999 8999999999999974 4578899987533 22
Q ss_pred h---HhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1699 E---ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1699 ~---~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+ .++|+++++++ |+ .|++|+.|++++ +||+|+|||++|++|++.+.+
T Consensus 591 ~~~l~~~l~~~~~~~-L~-~~~~P~~i~~v~--~lP~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 591 SEELRKSLILTVRNQ-IG-AFAAPDKIHWAP--GLPKTRSGKIMRRILRKIASR 640 (666)
T ss_pred CHHHHHHHHHHHHHh-CC-CCcCCCEEEECC--CCCCCCCcCchHHHHHHHHcC
Confidence 2 24788888987 88 999999999999 999999999999999998743
|
|
| >PLN03052 acetate--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-61 Score=640.39 Aligned_cols=504 Identities=17% Similarity=0.175 Sum_probs=390.4
Q ss_pred HHHHHHHhhhcCCCcEEEEECCC--CceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 84 EAAIQRYGSATYKAPVATVLDPN--GKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 84 ~~~~~~~a~~~pd~~Av~~~d~~--g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
..+|++++.++|+++|+++.+.+ +.+.+++||+||+++++++|+.|+ +.|+++||+|+++++|+ ++++
T Consensus 178 ~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~GdrVai~~pn~--~e~v 247 (728)
T PLN03052 178 ECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALD--------ALGFEKGDAIAIDMPMN--VHAV 247 (728)
T ss_pred HHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHHH
Confidence 34566665678999999987643 223368999999999999999999 89999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccc---------ccccceeccCC-----
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKT---------AAGEVVAFKGW----- 227 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~---------~~~~~~~~~~~----- 227 (1761)
+++|||+++|++++|++|.++.+ ++.+++++++++++|+++.....-... ....++.+...
T Consensus 248 ia~LA~~~~Gav~vpi~p~~~~~-----~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~ 322 (728)
T PLN03052 248 IIYLAIILAGCVVVSIADSFAPS-----EIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVR 322 (728)
T ss_pred HHHHHHHHcCCEEEeeCCCCCHH-----HHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccc
Confidence 99999999999999999999977 899999999999999987543211000 00011111100
Q ss_pred -----CcceeEEeccccCCC----CCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeE
Q psy14338 228 -----PKLTWFVTEHLAKTP----KDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENM 298 (1761)
Q Consensus 228 -----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~ 298 (1761)
....| .+...... ..........+++++||+|||||||+||||+++|++++..+......++++++|++
T Consensus 323 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~ 400 (728)
T PLN03052 323 VKLREGDMSW--DDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIV 400 (728)
T ss_pred cccccCCccH--HHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEE
Confidence 00001 11111100 00011112356899999999999999999999999988877766667889999999
Q ss_pred EEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeE
Q psy14338 299 VCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRL 378 (1761)
Q Consensus 299 l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~ 378 (1761)
+++++++|+++.+. ++.+|++|+++++.+. ..++..+++++++++||++..+| +++..+.........++++||.
T Consensus 401 ~~~~~l~w~~g~~~-v~~~L~~Gat~vl~~g---~p~~~~~~~~i~~~~vT~l~~~P-t~l~~l~~~~~~~~~dlssLr~ 475 (728)
T PLN03052 401 CWPTNLGWMMGPWL-VYASLLNGATLALYNG---SPLGRGFAKFVQDAKVTMLGTVP-SIVKTWKNTNCMAGLDWSSIRC 475 (728)
T ss_pred EECCCcHHHhHHHH-HHHHHHhCCEEEEeCC---CCCCChHHHHHHHHCCCEEEECH-HHHHHHHhcCCcccCChhheeE
Confidence 99999999999985 8999999999999974 34567799999999999999986 5887777654445668899999
Q ss_pred EEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCcc
Q psy14338 379 LLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSL 458 (1761)
Q Consensus 379 v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (1761)
+++| ||+++++....+.+.+ +.. .++|.||+||++.........
T Consensus 476 i~s~--Ge~l~~~~~~~~~~~~---~~~--~i~~~yG~TE~~~~~~~~~~~----------------------------- 519 (728)
T PLN03052 476 FGST--GEASSVDDYLWLMSRA---GYK--PIIEYCGGTELGGGFVTGSLL----------------------------- 519 (728)
T ss_pred EEec--CCCCCHHHHHHHHHhc---CCC--CeEeeccChhhCcccccCCCC-----------------------------
Confidence 9999 9999999877766665 321 389999999987533211100
Q ss_pred CcccccccCCCCCCcEEEEEeCCCCcccCCCCC--ceEEEEecC--CccccccCCCccccccccccccccCCCccCCCce
Q psy14338 459 TSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDE--VGEICVAST--GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTY 534 (1761)
Q Consensus 459 ~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~--~GEL~i~G~--~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~ 534 (1761)
....++++|+|++|++++|+|++|+ ++|.|+ +|||+|+++ +..+||+|+. .+...|..+|+.. +++|
T Consensus 520 ~~~~~g~~g~p~~g~~v~v~d~~g~--~v~~g~~~~GEL~v~~~~~~~~~~~~~~~-~~~~yf~~~p~~~------g~~~ 590 (728)
T PLN03052 520 QPQAFAAFSTPAMGCKLFILDDSGN--PYPDDAPCTGELALFPLMFGASSTLLNAD-HYKVYFKGMPVFN------GKIL 590 (728)
T ss_pred CCCCCCccccCCCCceEEEECCCCC--CCCCCCCceEEEEEeCCCCCCCccccCch-hhhhhhhcCCCCC------CCEE
Confidence 0123568999999999999999997 588886 699999876 4456888864 4566665555432 2679
Q ss_pred EeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHH-hcCCccccccceEEEEEEecC-CC-ceEEEEEEeC--
Q psy14338 535 TRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVL-AVEPMKFIYRGRIAVFSIRVL-RD-ERICVIAEQR-- 609 (1761)
Q Consensus 535 yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~-~~~~v~~~~~~~a~v~~~~~~-~~-~~l~a~v~~~-- 609 (1761)
|+|||+|++|+||+++|+||.||+||++|+||++.|||++|. .++.| .+++|+++++. .+ +.+++||++.
T Consensus 591 ~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V-----~eaaVvg~~d~~~g~e~~~afVvl~~~ 665 (728)
T PLN03052 591 RRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESV-----LETAAIGVPPPGGGPEQLVIAAVLKDP 665 (728)
T ss_pred EecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCc-----ceEEEEeeecCCCCcEEEEEEEEEecC
Confidence 999999999999999999999999999999999999999886 45556 79999999864 44 7899999976
Q ss_pred CC--CCHHHHHHHH----HHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 610 PD--CSEEESFQWM----SRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 610 ~~--~~~~~l~~~l----~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++ .+.++|++++ +++|++|++|..| +.+++||+|.|||++|+.|++.+..
T Consensus 666 ~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i-------~~v~~lP~T~sGKi~Rr~Lr~~~~~ 721 (728)
T PLN03052 666 PGSNPDLNELKKIFNSAIQKKLNPLFKVSAV-------VIVPSFPRTASNKVMRRVLRQQLAQ 721 (728)
T ss_pred CCCCCCHHHHHHHHHHHHHhhcCCccCCCEE-------EEcCCCCCCCchHHHHHHHHHHHHh
Confidence 33 4556776654 5667778999875 5569999999999999999998754
|
|
| >PRK03584 acetoacetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-61 Score=642.75 Aligned_cols=497 Identities=15% Similarity=0.141 Sum_probs=390.9
Q ss_pred hcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCC
Q psy14338 93 ATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGI 172 (1761)
Q Consensus 93 ~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~ 172 (1761)
.+|+++|+++.+.+|. .+++||+||.++++++|+.|+ +.|+++||+|+|+++|+ +++++++|||+++|+
T Consensus 96 ~~~~~~Al~~~~~~~~-~~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e~v~~~lA~~~~Ga 164 (655)
T PRK03584 96 RRDDRPAIIFRGEDGP-RRELSWAELRRQVAALAAALR--------ALGVGPGDRVAAYLPNI--PETVVAMLATASLGA 164 (655)
T ss_pred CCCCCeEEEEECCCCc-eEEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCc
Confidence 5799999998765443 268999999999999999999 88999999999999999 999999999999999
Q ss_pred eEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccC---------c----cccc-ccceeccCCC----------
Q psy14338 173 VPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGL---------P----KTAA-GEVVAFKGWP---------- 228 (1761)
Q Consensus 173 ~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~---------~----~~~~-~~~~~~~~~~---------- 228 (1761)
+++|++|.++.+ ++.+++++++++++|+++.....- . .... ..++......
T Consensus 165 v~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 239 (655)
T PRK03584 165 IWSSCSPDFGVQ-----GVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPG 239 (655)
T ss_pred EEEeeCCCCCHH-----HHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCC
Confidence 999999999976 899999999999999987532110 0 0000 0111111000
Q ss_pred cceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHH-HHHHHHHHHcCCCCCCeEEEccCCcch
Q psy14338 229 KLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAML-SHCRALTQACHYTEGENMVCVLDFKRE 307 (1761)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~~~ 307 (1761)
...| .+................+++++||+|||||||+||||+++|++++ +.+......+++.++|+++++++++|+
T Consensus 240 ~~~~--~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 317 (655)
T PRK03584 240 ALLW--EDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWM 317 (655)
T ss_pred cccH--HHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHH
Confidence 0000 0111100111112234567999999999999999999999999875 446666777899999999999999998
Q ss_pred hhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeEEEecCCC
Q psy14338 308 TGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRLLLVGDGA 385 (1761)
Q Consensus 308 ~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~v~~gg~G 385 (1761)
++.+ ++.+|+.|+++++.+......++..+++.++++++|++..+| +++..++.... ....++++||.+++| |
T Consensus 318 ~~~~--~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~l~sLr~i~~~--G 392 (655)
T PRK03584 318 MWNW--LVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSA-KYLDACEKAGLVPGETHDLSALRTIGST--G 392 (655)
T ss_pred hHHH--HHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCH-HHHHHHHhcCCCccccCChhheEEEEEe--c
Confidence 6543 678999999999987433246899999999999999999885 57766655321 233578999999999 9
Q ss_pred ccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccc
Q psy14338 386 NPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQD 465 (1761)
Q Consensus 386 e~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (1761)
+++++++.+.|.+.++. ++ .++|.||+||++........ ......++
T Consensus 393 e~l~~~~~~~~~~~~~~-~~---~~~~~yG~TE~~~~~~~~~~-----------------------------~~~~~~g~ 439 (655)
T PRK03584 393 SPLPPEGFDWVYEHVKA-DV---WLASISGGTDICSCFVGGNP-----------------------------LLPVYRGE 439 (655)
T ss_pred CCCCHHHHHHHHHHhCC-Cc---eEEeccChHhhhcccccCCC-----------------------------CCCcCCCc
Confidence 99999999999988732 22 49999999998532221110 00123568
Q ss_pred cCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecC--CccccccCCCccccccccccccccCCCccCCCceEeecceEEE
Q psy14338 466 CGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAST--GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFL 543 (1761)
Q Consensus 466 iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~--~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~ 543 (1761)
+|.|++|++++|+|+++++ + .|+.|||+|+|+ +++.||||+|+.++ |....|.. .++||+|||+|++
T Consensus 440 ~g~p~~g~~~~ivd~~g~~--~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~--~~~~~~~~------~~g~~~TGDl~~~ 508 (655)
T PRK03584 440 IQCRGLGMAVEAWDEDGRP--V-VGEVGELVCTKPFPSMPLGFWNDPDGSR--YRDAYFDT------FPGVWRHGDWIEI 508 (655)
T ss_pred cCCCcCCceeEEECCCCCC--C-CCCceEEEEccCCCCCcceeeCCCccch--HHHhhhcc------CCCEeecCCeEEE
Confidence 9999999999999999874 6 799999999996 79999999998653 32222211 1579999999999
Q ss_pred eCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCC--CH---HHH
Q psy14338 544 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDC--SE---EES 617 (1761)
Q Consensus 544 ~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~--~~---~~l 617 (1761)
|+||+++|+||+||+||++|+||+|.|||++|.+++.| .+|+|++.++ ..++.+++||++.++. +. +++
T Consensus 509 d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V-----~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l 583 (655)
T PRK03584 509 TEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEV-----LDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARI 583 (655)
T ss_pred CCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCc-----ceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHH
Confidence 99999999999999999999999999999999998888 7999999986 5778999999987652 32 578
Q ss_pred HHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCC
Q psy14338 618 FQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGN 668 (1761)
Q Consensus 618 ~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~ 668 (1761)
+++++++|+.||+|..| +.+++||+|+||||+|++|++.+....
T Consensus 584 ~~~~~~~L~~~~~P~~i-------~~v~~lP~t~sGKi~r~~lr~~~~~~~ 627 (655)
T PRK03584 584 RTTIRTNLSPRHVPDKI-------IAVPDIPRTLSGKKVELPVKKLLHGRP 627 (655)
T ss_pred HHHHHhhCCCCcCCCEE-------EECCCCCCCCCccchHHHHHHHHcCCC
Confidence 99999999999999986 556999999999999999999886543
|
|
| >PRK05677 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-61 Score=633.15 Aligned_cols=497 Identities=21% Similarity=0.297 Sum_probs=403.7
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCcccc-CCCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSE-SSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~-~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.++.++|++.++++|+++|++..+ +.+||+||.++++++|+.|. + .|+++|++|+++++|+ ++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~------~~~Ty~el~~~~~~la~~L~--------~~~gi~~gd~Vai~~~n~--~~ 87 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLG------KTLTYGELYKLSGAFAAWLQ--------QHTDLKPGDRIAVQLPNV--LQ 87 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECC------ceeeHHHHHHHHHHHHHHHH--------HhcCCCCCCEEEEECCCC--HH
Confidence 479999999999999999998654 58999999999999999998 6 5899999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----ccceecc--CC-Ccc-e
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----GEVVAFK--GW-PKL-T 231 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~~--~~-~~~-~ 231 (1761)
+++++|||+++|+++||++|.++.+ ++.+++++++++++|++......+..... ..++... +. +.. .
T Consensus 88 ~~~~~la~~~~Ga~~v~l~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (562)
T PRK05677 88 YPVAVFGAMRAGLIVVNTNPLYTAR-----EMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKR 162 (562)
T ss_pred HHHHHHHHHHcCeEEeecCCCCCHH-----HHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhh
Confidence 9999999999999999999999976 89999999999999998765433221110 0000000 00 000 0
Q ss_pred ----------------------eEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH
Q psy14338 232 ----------------------WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA 289 (1761)
Q Consensus 232 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~ 289 (1761)
....+.+..............++++++|+|||||||+||||+++|+++...+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~ 242 (562)
T PRK05677 163 LLINAVVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRAL 242 (562)
T ss_pred hhcccchhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHH
Confidence 0000000000000111223467999999999999999999999999998877666555
Q ss_pred cC--CCC-CCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCC
Q psy14338 290 CH--YTE-GENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK 366 (1761)
Q Consensus 290 ~~--~~~-~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~ 366 (1761)
++ +.. .++++..+|++|..++...++.++..|++.++.+. ..++..+++.|+++++|+++.+| +++..++...
T Consensus 243 ~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p-~~~~~l~~~~ 318 (562)
T PRK05677 243 MGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISN---PRDLPAMVKELGKWKFSGFVGLN-TLFVALCNNE 318 (562)
T ss_pred hccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecC---cccHHHHHHHHHHcCceEEecHH-HHHHHHHhCc
Confidence 43 333 36889999999999886557888889998887764 56899999999999999999986 4777776654
Q ss_pred CCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcc
Q psy14338 367 DHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLS 446 (1761)
Q Consensus 367 ~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 446 (1761)
.....++++||.+++| |+++++++.++|.+.+ |.+ ++|.||+||++.+++..+..
T Consensus 319 ~~~~~~~~~lr~v~~g--G~~~~~~~~~~~~~~~---~~~---v~~~YG~tE~~~~~~~~~~~----------------- 373 (562)
T PRK05677 319 AFRKLDFSALKLTLSG--GMALQLATAERWKEVT---GCA---ICEGYGMTETSPVVSVNPSQ----------------- 373 (562)
T ss_pred ccccCChhhceEEEEc--CccCCHHHHHHHHHHc---CCC---eeccCCccccCcceeecCcc-----------------
Confidence 4444567899999999 9999999999999987 443 99999999998655433211
Q ss_pred cceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCC
Q psy14338 447 YGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADG 526 (1761)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g 526 (1761)
...++++|+|+++++++|+|++++ ++|.|+.|||+|+|+.+++||+++|+.|++.|.
T Consensus 374 -------------~~~~~~vG~~~~~~~v~i~d~~~~--~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~-------- 430 (562)
T PRK05677 374 -------------AIQVGTIGIPVPSTLCKVIDDDGN--ELPLGEVGELCVKGPQVMKGYWQRPEATDEILD-------- 430 (562)
T ss_pred -------------CCCCCccCccCCCCEEEEECCCCC--CCCCCCCeEEEEecCccchhhcCCchhhhhccC--------
Confidence 123568999999999999999886 599999999999999999999999999999984
Q ss_pred CccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEE
Q psy14338 527 TALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVI 605 (1761)
Q Consensus 527 ~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~ 605 (1761)
+++||+|||+|++++||.++|.||+||+||++|++|+|.|||+.|..++.| .+++|+++++. .++.++++
T Consensus 431 ----~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v-----~~~~v~g~~~~~~g~~~~~~ 501 (562)
T PRK05677 431 ----SDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGV-----LQCAAIGVPDEKSGEAIKVF 501 (562)
T ss_pred ----CCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCc-----cEEEEEeccCccCCceEEEE
Confidence 378999999999999999999999999999999999999999999998888 79999999854 56788888
Q ss_pred EEeCC--CCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 606 AEQRP--DCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 606 v~~~~--~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++..+ +.+.++++++++++|+.||+|..+ +.+++||+|+|||++|++|++.+..
T Consensus 502 v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i-------~~v~~iP~t~sGKi~r~~L~~~~~~ 557 (562)
T PRK05677 502 VVVKPGETLTKEQVMEHMRANLTGYKVPKAV-------EFRDELPTTNVGKILRRELRDEELK 557 (562)
T ss_pred EEeCCCCCCCHHHHHHHHHHhhhhccCCcEE-------EEeccCCCCCcccccHHHHHHHHHH
Confidence 88653 467889999999999999999986 5569999999999999999986643
|
|
| >PRK13382 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-62 Score=632.76 Aligned_cols=484 Identities=17% Similarity=0.189 Sum_probs=400.7
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|.++++++||++|+...+ +++||+||+++++++|++|+ +.|+++|++|+++++|+ +++
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~A~~L~--------~~g~~~g~~V~i~~~n~--~~~ 106 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDEL------GTLTWRELDERSDALAAALQ--------ALPIGEPRVVGIMCRNH--RGF 106 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeCC------CeecHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEecCc--HHH
Confidence 469999999999999999998643 48999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCcceeEEe
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPKLTWFVT 235 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 235 (1761)
++++|||+++|+++||++|.++.+ ++.+++++++++++|++......+..... ..++....... .. ..
T Consensus 107 ~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 179 (537)
T PRK13382 107 VEALLAANRIGADILLLNTSFAGP-----ALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDH-DL-TV 179 (537)
T ss_pred HHHHHHHHHcCcEEEecCcccCHH-----HHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcc-cc-cH
Confidence 999999999999999999999976 89999999999999998765433322100 00011100000 00 00
Q ss_pred ccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHH
Q psy14338 236 EHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
+.+...... ......+++.++++|||||||+||||+++|+++...+.+....+.+..+++++..+|++|..++. .++
T Consensus 180 ~~~~~~~~~--~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~ 256 (537)
T PRK13382 180 EVLIAAHAG--QRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFS-QLV 256 (537)
T ss_pred HHHhhccCc--CCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHH-HHH
Confidence 001111111 11123578899999999999999999999999998888888888899999999999999999987 499
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
.++..|+++++.+ .+++..+++.|+++++|++..+| +++..++.... ....++++||.+++| |++++++++
T Consensus 257 ~~l~~g~~~~~~~----~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~~~~lr~i~~g--G~~l~~~~~ 329 (537)
T PRK13382 257 LAASLACTIVTRR----RFDPEATLDLIDRHRATGLAVVP-VMFDRIMDLPAEVRNRYSGRSLRFAAAS--GSRMRPDVV 329 (537)
T ss_pred HHHhcCcEEEECC----CcCHHHHHHHHHHhCCEEEEehH-HHHHHHHcCCchhcccCCccceeEEEEc--CCCCCHHHH
Confidence 9999999999876 78999999999999999999996 47777765432 223456789999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
++|.+.+ |.+ ++|.||+||++.+++..+.. ......++|+|++|+
T Consensus 330 ~~~~~~~---~~~---i~~~YG~TE~~~~~~~~~~~-----------------------------~~~~~~~vG~p~~~~ 374 (537)
T PRK13382 330 IAFMDQF---GDV---IYNNYNATEAGMIATATPAD-----------------------------LRAAPDTAGRPAEGT 374 (537)
T ss_pred HHHHHHc---CCc---EEecccccccCcceecChhH-----------------------------hccCCCCccccCcCc
Confidence 9999988 433 99999999998765533210 012356899999999
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
+++|+|++++ ++|.|+.|||+|+|++++.||+ |+.|+. |. ++||+|||++++++||+++|+|
T Consensus 375 ~~~i~d~~~~--~~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~~-------------~g~~~TGDl~~~~~~g~l~~~G 436 (537)
T PRK13382 375 EIRILDQDFR--EVPTGEVGTIFVRNDTQFDGYT--SGSTKD-FH-------------DGFMASGDVGYLDENGRLFVVG 436 (537)
T ss_pred EEEEECCCCC--CCCCCCeeEEEEEcCCcccCcc--ccchhh-cc-------------CCCEeeCceEEEeCCCcEEEec
Confidence 9999999987 5899999999999999999998 666653 42 6899999999999999999999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhh
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVLQAVDS 630 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~ 630 (1761)
|+||+||++|+||+|.|||+.|.++++| .+++|++.++. .++.+++++++.++ .+.++++++++++|+.|++
T Consensus 437 R~dd~ik~~G~~v~~~eIE~~l~~~~~V-----~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~ 511 (537)
T PRK13382 437 RDDEMIVSGGENVYPIEVEKTLATHPDV-----AEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQHVRDNLANYKV 511 (537)
T ss_pred cccceeEECCEEECHHHHHHHHHhCCCE-----eeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999998888 79999998854 67889999987654 5678999999999999999
Q ss_pred cceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 631 IHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 631 P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
|..+ +.++++|+|++||++|++|++
T Consensus 512 P~~i-------~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 512 PRDI-------VVLDELPRGATGKILRRELQA 536 (537)
T ss_pred CcEE-------EEeccCCCCCCCCCcHHhhCC
Confidence 9987 445999999999999999864
|
|
| >COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-63 Score=543.14 Aligned_cols=492 Identities=18% Similarity=0.228 Sum_probs=410.4
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
+++.+.+.+++ +++||++||+ ++++.+||+||+++++++|..|++. |+++||+|.+.++|..+++++++
T Consensus 28 ~~l~d~L~~~A-----~~~pdriAv~-----d~~~~~sY~eLdqr~d~LAa~l~~l-Gi~~Gd~vlvQLpN~~ef~~~~F 96 (542)
T COG1021 28 RTLTDILTDHA-----ARYPDRIAVI-----DGERRLSYAELDQRADRLAAGLRRL-GIKPGDTVLVQLPNVAEFYITFF 96 (542)
T ss_pred CcHHHHHHHHH-----hhcCCceEEe-----cCcccccHHHHHHHHHHHHHHHHhc-CCCCCCEEEEECCchHHHHHHHH
Confidence 45555555555 4889999999 8889999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH--------HHHHhhh-cccc-ccccccCCcc--cc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV--------IKLLKSK-EASN-VVDIKSWPTI--LD 1310 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~--------~~~~~~~-~~~~-~~~~~~~~~~--~~ 1310 (1761)
|++|+|+++|.--|++-.. ++.+..+.+.++.+|.+... ...+... .... ++....-+.. +.
T Consensus 97 ALlrlGv~PVlALpsHr~~------Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~ 170 (542)
T COG1021 97 ALLRLGVAPVLALPSHRAS------ELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLE 170 (542)
T ss_pred HHHHcCcchhhccchhhHH------HHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhh
Confidence 9999999999888877666 99999999999999987532 1111111 1101 1110111000 00
Q ss_pred CCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHH-HH
Q psy14338 1311 TDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFAL-WV 1389 (1761)
Q Consensus 1311 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~ 1389 (1761)
..-........+..+.+++++||...+-||||+||-+..+|.....++....+..+++.+++.++.+|..|.+.+.. ..
T Consensus 171 ~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~ 250 (542)
T COG1021 171 AALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGA 250 (542)
T ss_pred hhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcch
Confidence 00000011112235567889999999999999999999999999999999999999999999999999988876643 47
Q ss_pred HHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCCh
Q psy14338 1390 LSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPR 1469 (1761)
Q Consensus 1390 ~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~ 1469 (1761)
+..+++|||+|+.++ .+|+.-+.+|++|+||+..++|.+...|++.. +....+++|||.+-+||..+++
T Consensus 251 LGv~~agG~VVla~~----psp~~~F~lIerh~Vt~tALVPpla~LWlqa~-------e~~~~~LsSLrllQVGGarl~~ 319 (542)
T COG1021 251 LGVFLAGGTVVLAPD----PSPELCFPLIERHGVTVTALVPPLASLWLQAA-------EWERADLSSLRLLQVGGARLSA 319 (542)
T ss_pred hheeeeccEEEECCC----CCHHHHHHHHHHhccceEEeccHHHHHHHHhh-------hcccCCchheeEEeecCcccCH
Confidence 899999999999885 68999999999999999999999999998753 3477899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccccc-C
Q psy14338 1470 IHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL-P 1548 (1761)
Q Consensus 1470 ~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~-~ 1548 (1761)
.+.+++...+. |.+.+.|||.|-- .+|+- -++|...-..+-|+|+ |
T Consensus 320 -~~Arrv~~~lg------C~LQQVFGMAEGL----vnyTR----------------------LDDp~E~i~~TQGrPlsP 366 (542)
T COG1021 320 -TLARRVPAVLG------CQLQQVFGMAEGL----VNYTR----------------------LDDPPEIIIHTQGRPLSP 366 (542)
T ss_pred -HHHhhchhhhC------chHHHHhhhhhhh----hcccc----------------------cCCchHheeecCCCcCCC
Confidence 88888777664 7899999999932 22221 1122222334579998 6
Q ss_pred CcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1549 GVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1549 ~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
.-+++|+|.+ |++|++|++|+|..+||...+|||+ .|+-++.+| +.+|+|||||++++ |+|
T Consensus 367 ~DEvrvvD~d-g~pv~pGE~G~LltRGPYTirGYyr---ap~HNa~aF--------~a~GFYrsGD~V~~------~~d- 427 (542)
T COG1021 367 DDEVRVVDAD-GNPVAPGEVGELLTRGPYTIRGYYR---APEHNARAF--------DADGFYRSGDLVRR------DPD- 427 (542)
T ss_pred cceeEEecCC-CCCCCCCCcceeeecCCeeeeeecc---Cchhhhhcc--------CcCCceecCceeEe------cCC-
Confidence 7899999966 9999999999999999999999999 999999999 68999999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhH
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDL 1703 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l 1703 (1761)
|+ |.+.||.||||+.+|++|-.+|||+ .|..||.|.+|++|+. ||+.+|||+.++......+|
T Consensus 428 -------Gy----l~V~GR~KDQINRgGEKIAAeEvEn-~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~~~~~ql 495 (542)
T COG1021 428 -------GY----LVVEGRVKDQINRGGEKIAAEEVEN-LLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPPLRAAQL 495 (542)
T ss_pred -------ce----EEEEeeehhhhccccchhhHHHHHH-HHhhCchhhhhhhhcCchhhcCcceeEEEEecCCCCCHHHH
Confidence 99 9999999999999999999999999 8999999999999974 66899999998888889999
Q ss_pred HHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1704 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1704 ~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+.+|.+.-|. .|++|+.|.+++ .||+|+-||||||+|++.+..
T Consensus 496 r~~L~~~GlA-a~K~PDrie~v~--~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 496 RRFLRERGLA-AFKLPDRIEFVD--SLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred HHHHHHcchh-hhcCCcceeecc--cCCCcccccccHHHHHHHhhh
Confidence 9999998888 999999999999 999999999999999998754
|
|
| >PRK08314 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-61 Score=632.14 Aligned_cols=498 Identities=19% Similarity=0.252 Sum_probs=414.8
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccC-CCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSES-SLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~-Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.++.++|.+.+.++|+++|+.+.+ +.+||+||.++++++|..|. +. |+++|++|+++++|+ ++
T Consensus 10 ~tl~~~l~~~a~~~~~~~a~~~~~------~~~Ty~~l~~~v~~~a~~L~--------~~~g~~~g~~V~i~~~~~--~~ 73 (546)
T PRK08314 10 TSLFHNLEVSARRYPDKTAIVFYG------RAISYRELLEEAERLAGYLQ--------QECGVRKGDRVLLYMQNS--PQ 73 (546)
T ss_pred CCHHHHHHHHHHHcCCCcceeecC------ceecHHHHHHHHHHHHHHHH--------HhhCCCCCCEEEEECCCC--hH
Confidence 578999999999999999999866 58999999999999999999 77 899999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----ccceecc--C-------
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----GEVVAFK--G------- 226 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~~--~------- 226 (1761)
+++++|||+++|++++|++|.++.+ ++.+++++++++++|+++.....+..... ..++... .
T Consensus 74 ~~~~~lA~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (546)
T PRK08314 74 FVIAYYAILRANAVVVPVNPMNREE-----ELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPE 148 (546)
T ss_pred HHHHHHHHHHcCcEEeecCcCcCHH-----HHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccc
Confidence 9999999999999999999999876 89999999999999998876544332110 0010000 0
Q ss_pred CCccee---------------EEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcC
Q psy14338 227 WPKLTW---------------FVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH 291 (1761)
Q Consensus 227 ~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~ 291 (1761)
.....+ ...+...... .........++++|+|+|||||||.||||+++|+++++.+......++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~ 227 (546)
T PRK08314 149 IAVPAWLRAEPPLQALAPGGVVAWKEALAAG-LAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSN 227 (546)
T ss_pred cCcccccccccccccccccccccHHHHhccc-CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhC
Confidence 000000 0000000000 011223456789999999999999999999999999999998888899
Q ss_pred CCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCC
Q psy14338 292 YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDI 371 (1761)
Q Consensus 292 ~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~ 371 (1761)
+.++|++++++|++|..+++..++.+|.+|+++++.+ .+++..+++.++++++|++.++| +++..++........
T Consensus 228 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~----~~~~~~~~~~i~~~~~t~~~~~p-~~~~~ll~~~~~~~~ 302 (546)
T PRK08314 228 STPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP----RWDREAAARLIERYRVTHWTNIP-TMVVDFLASPGLAER 302 (546)
T ss_pred CCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC----CCCHHHHHHHHHHhcCceecccH-HHHHHHHhCCCcccc
Confidence 9999999999999999998767889999999999998 67899999999999999999996 477777766555556
Q ss_pred CCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceee
Q psy14338 372 SLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVR 451 (1761)
Q Consensus 372 ~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 451 (1761)
+++++|.+++| |+++++++.++|.+.+ |++ ++|.||+||++..+...+..
T Consensus 303 ~~~~l~~~~~g--G~~~~~~~~~~~~~~~---~~~---~~~~YG~tE~~~~~~~~~~~---------------------- 352 (546)
T PRK08314 303 DLSSLRYIGGG--GAAMPEAVAERLKELT---GLD---YVEGYGLTETMAQTHSNPPD---------------------- 352 (546)
T ss_pred Cchhhheeeec--cccCCHHHHHHHHHHc---CCc---EEecccccccccceecCCCc----------------------
Confidence 77899999999 9999999999999887 443 99999999998655433211
Q ss_pred ecCCCccCcccccccCCCCCCcEEEEEeCC-CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccC
Q psy14338 452 VDQENSLTSLTLQDCGQVMPGCIMTVVKMD-SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALS 530 (1761)
Q Consensus 452 ~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~-~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~ 530 (1761)
.....++|+|++|++++|+|++ ++ ++|.|..|||+|+|++++.||+|+++.|++.|..+ +
T Consensus 353 --------~~~~~~~G~~~~g~~~~i~d~~~~~--~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~---------~ 413 (546)
T PRK08314 353 --------RPKLQCLGIPTFGVDARVIDPETLE--ELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEI---------D 413 (546)
T ss_pred --------CCCCCccCcccCCeEEEEEeCCCCc--CCCCCCceEEEEECCchhccccCChhHhhhhhhhc---------C
Confidence 1234689999999999999965 44 68999999999999999999999999999998632 2
Q ss_pred CCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeC
Q psy14338 531 QDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQR 609 (1761)
Q Consensus 531 ~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~ 609 (1761)
+.+||+|||+|+++++|.++++||+||+||++|+||+|.|||+.|.+++++ .+++|++.++. .++.+++|++..
T Consensus 414 ~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v-----~~~~v~~~~~~~~~~~~~a~v~~~ 488 (546)
T PRK08314 414 GKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAI-----QEACVIATPDPRRGETVKAVVVLR 488 (546)
T ss_pred CCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcch-----heEEEEeCCCcccCceeEEEEEEC
Confidence 367999999999999999999999999999999999999999999998887 78999988754 578899999987
Q ss_pred CC----CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 610 PD----CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 610 ~~----~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++ .+.++++++++++|+.|++|..+ +.+++||+|+|||++|++|++....
T Consensus 489 ~~~~~~~~~~~l~~~~~~~l~~~~~P~~~-------~~v~~iP~t~~GKv~r~~L~~~~~~ 542 (546)
T PRK08314 489 PEARGKTTEEEIIAWAREHMAAYKYPRIV-------EFVDSLPKSGSGKILWRQLQEQEKA 542 (546)
T ss_pred CCCCCCCCHHHHHHHHHHhcccCCCCcEE-------EEecCCCCCCccceeHHHHHHHHhh
Confidence 54 45689999999999999999996 5569999999999999999886653
|
|
| >PLN02861 long-chain-fatty-acid-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-62 Score=642.34 Aligned_cols=505 Identities=14% Similarity=0.154 Sum_probs=378.8
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEE---CCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCc
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVL---DPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDP 157 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~---d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~ 157 (1761)
.++.++|+++++++|+++|+... ++.....+.+||+||+++++++|+.|+ +.|+++||+|+|+++|+
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~--------~~Gv~~gd~Vai~~~n~-- 112 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIR--------SRGVNPGDRCGIYGSNC-- 112 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--
Confidence 58899999999999999999753 221111257999999999999999999 89999999999999999
Q ss_pred hhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc------cccceeccCCCc--
Q psy14338 158 INFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA------AGEVVAFKGWPK-- 229 (1761)
Q Consensus 158 ~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~------~~~~~~~~~~~~-- 229 (1761)
++|++++|||+++|+++|||+|.++.+ ++.+++++++++++|+++...+.+.... ...++..+....
T Consensus 113 ~e~~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~ 187 (660)
T PLN02861 113 PEWIIAMEACNSQGITYVPLYDTLGAN-----AVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQ 187 (660)
T ss_pred HHHHHHHHHHHHcCCeEEEecCCCCHH-----HHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhh
Confidence 999999999999999999999999977 8999999999999999866433221100 011121111100
Q ss_pred --------ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcC-----CCCCC
Q psy14338 230 --------LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH-----YTEGE 296 (1761)
Q Consensus 230 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~-----~~~~d 296 (1761)
......+.+..............++|+|+|+|||||||.||||++||+++++.+......++ ++++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d 267 (660)
T PLN02861 188 KEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEED 267 (660)
T ss_pred hhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCC
Confidence 00000111100000011122346899999999999999999999999999988877665544 47889
Q ss_pred eEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC-----------
Q psy14338 297 NMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT----------- 365 (1761)
Q Consensus 297 ~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~----------- 365 (1761)
++++++|++|.++... .+.+|+.|+++++.+ +++..+++.|+++++|+++++|. ++..++..
T Consensus 268 ~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~-~~~~l~~~~~~~~~~~~~~ 340 (660)
T PLN02861 268 SYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-----GDIRYLMEDVQALKPTIFCGVPR-VYDRIYTGIMQKISSGGML 340 (660)
T ss_pred EEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCcEEeechH-HHHHHHHHHHHHHhccCHH
Confidence 9999999999999875 666899999998874 37899999999999999999974 77665420
Q ss_pred --------------------------CCCCCC-------CC-CceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccc
Q psy14338 366 --------------------------KDHKDI-------SL-SSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAIC 411 (1761)
Q Consensus 366 --------------------------~~~~~~-------~l-~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~ 411 (1761)
+..... .+ ++||.+++| |+++++++ .+|.+.++ .. .++
T Consensus 341 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~G--gapl~~~~-~~~~~~~~---~~--~l~ 412 (660)
T PLN02861 341 RKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSG--AAPLPRHV-EEFLRVTS---CS--VLS 412 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEEC--CCCCCHHH-HHHHHHHc---CC--Cee
Confidence 000000 11 579999999 99999986 56777663 21 389
Q ss_pred cccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe--CCCCcccCCC
Q psy14338 412 PCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK--MDSPSYLCKT 489 (1761)
Q Consensus 412 n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d--~~~~~~~~p~ 489 (1761)
|+||+||++..++..... .....+++|+|+++++++|+| +++.. .++.
T Consensus 413 ~~YG~TE~~~~~~~~~~~-----------------------------~~~~~gsvG~p~p~~ev~i~d~~~~g~~-~~~~ 462 (660)
T PLN02861 413 QGYGLTESCGGCFTSIAN-----------------------------VFSMVGTVGVPMTTIEARLESVPEMGYD-ALSD 462 (660)
T ss_pred Eecchhhhhhceeecccc-----------------------------cCCCCCCccCccCceEEEEEEccccCcc-cCCC
Confidence 999999997655432210 011356899999999999998 33432 3566
Q ss_pred CCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE-CCcccCh
Q psy14338 490 DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV-TGRKHNA 568 (1761)
Q Consensus 490 G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki-~G~rIe~ 568 (1761)
+..|||+|+||+++.||||+|++|+++|. +|||||||+|++|+||+|+|+||+||+||+ +|+||+|
T Consensus 463 ~~~GEi~vrGp~v~~GY~~~pe~T~~~f~-------------dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p 529 (660)
T PLN02861 463 VPRGEICLRGNTLFSGYHKRQDLTEEVLI-------------DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAV 529 (660)
T ss_pred CCceeEEEcCCcccccccCCHHHHHhhhh-------------ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcH
Confidence 77899999999999999999999999994 789999999999999999999999999997 6999999
Q ss_pred HHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC----------C--CHH----------HHHHHHHH---
Q psy14338 569 DDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD----------C--SEE----------ESFQWMSR--- 623 (1761)
Q Consensus 569 ~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~----------~--~~~----------~l~~~l~~--- 623 (1761)
.|||+.+.+++.| .+|+|++.+ .++.++|+|++... . +.+ .+.+.+++
T Consensus 530 ~eIE~~l~~~p~V-----~~a~V~G~~--~~~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (660)
T PLN02861 530 ENLENTYSRCPLI-----ASIWVYGNS--FESFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGK 602 (660)
T ss_pred HHHHHHHhcCCCe-----eEEEEEecC--CcceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999998887 799999874 35789999987532 1 111 12223332
Q ss_pred --HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 624 --VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 624 --~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.|+.|..++.+.+....| .++.=.+|+++|+.|+.+.+.|.+
T Consensus 603 ~~~l~~~e~i~~~~l~~~~f-t~~ng~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02861 603 KLQLRGFEMLKAIHLEPNPF-DIERDLITPTFKLKRPQLLKYYKD 646 (660)
T ss_pred HcCCCCcceeeEEEEeCCCC-CcccCcCCHHHhhhHHHHHHHHHH
Confidence 256677777652211111 112228999999999999988864
|
|
| >PRK05857 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-61 Score=626.53 Aligned_cols=500 Identities=16% Similarity=0.188 Sum_probs=392.9
Q ss_pred cchhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCch
Q psy14338 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPI 158 (1761)
Q Consensus 79 ~~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~ 158 (1761)
.+.++.+.|.++|+++|+++|+...+++ +.+||+||+++++++|+.|+ +.|+++|++|+++++|+ +
T Consensus 12 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~----~~~Ty~el~~~~~~~a~~L~--------~~g~~~g~~V~i~~~~~--~ 77 (540)
T PRK05857 12 LPSTVLDRVFEQARQQPEAIALRRCDGT----SALRYRELVAEVGGLAADLR--------AQSVSRGSRVLVISDNG--P 77 (540)
T ss_pred CCcchHHHHHHHHhhCCCcEEEeecCCC----ceeeHHHHHHHHHHHHHHHH--------HhCcCCCCEEEEEcCCC--H
Confidence 3567899999999999999999876532 47999999999999999999 88999999999999999 9
Q ss_pred hHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----ccceeccCCCcceeEE
Q psy14338 159 NFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----GEVVAFKGWPKLTWFV 234 (1761)
Q Consensus 159 ~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 234 (1761)
++++++|||+++|++++|+|+.++.+ ++.++++.++++++|+++........... ...+..+....... .
T Consensus 78 e~~~~~lA~~~~G~v~v~l~~~~~~~-----~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 151 (540)
T PRK05857 78 ETYLSVLACAKLGAIAVMADGNLPIA-----AIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRE-S 151 (540)
T ss_pred HHHHHHHHHHHcCeEEEecCccCCHH-----HHHHHHHhcCCceEEEeccchhccccccccccccceeEeeccccccc-c
Confidence 99999999999999999999999976 89999999999999998765322111110 00111110000000 0
Q ss_pred eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH----HcCCCCCCeEEEccCCcchhhh
Q psy14338 235 TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ----ACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
....... .........+++++|++|||||||.||||+++|+++.+.+..... .++...+++++..+|++|+.++
T Consensus 152 ~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l 229 (540)
T PRK05857 152 EHSLDAA--SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGL 229 (540)
T ss_pred ccccccc--ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchH
Confidence 0000000 001123356789999999999999999999999999876544322 2456678999999999999999
Q ss_pred HHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCH
Q psy14338 311 WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSL 390 (1761)
Q Consensus 311 ~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~ 390 (1761)
+. .+.+++.|+++++. ..++..+++.|+++++|+++++|+ ++..++........+++++|.+++| |++++.
T Consensus 230 ~~-~~~~l~~G~~~v~~-----~~~~~~~~~~i~~~~it~~~~~P~-~~~~l~~~~~~~~~~~~~lr~~~~g--G~~~~~ 300 (540)
T PRK05857 230 WW-ILTCLMHGGLCVTG-----GENTTSLLEILTTNAVATTCLVPT-LLSKLVSELKSANATVPSLRLVGYG--GSRAIA 300 (540)
T ss_pred HH-HHHHhhcceeEEec-----CCChhHHHHHHHhcCcceEEeChH-HHHHHHhccccCCCcCccceEEEEc--CccCCc
Confidence 85 89999999998763 347899999999999999999864 7777776655445678999999999 899888
Q ss_pred HHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC
Q psy14338 391 SSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM 470 (1761)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 470 (1761)
...+ |.+.+ |++ ++|.||+||++..+...+... ......+.+++|+|+
T Consensus 301 ~~~~-~~~~~---g~~---i~~~YG~TE~~~~~~~~~~~~-------------------------~~~~~~~~~~~G~~~ 348 (540)
T PRK05857 301 ADVR-FIEAT---GVR---TAQVYGLSETGCTALCLPTDD-------------------------GSIVKIEAGAVGRPY 348 (540)
T ss_pred hhHH-HHHHh---CCe---eecccCCCcCCceeeeccccc-------------------------ccccccccCCcCccc
Confidence 7764 66665 554 999999999986444322110 000012356899999
Q ss_pred CCcEEEEEeCCCCcc----cCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCC
Q psy14338 471 PGCIMTVVKMDSPSY----LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPG 546 (1761)
Q Consensus 471 ~~~~~~I~d~~~~~~----~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~d 546 (1761)
+|++++|+|+++... .+|.|+.|||+|+|+++++||+++++.|++.|. ++||+|||+|++|+|
T Consensus 349 ~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~-------------~g~~~TGDlg~~d~~ 415 (540)
T PRK05857 349 PGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLI-------------DGWVNTGDLLERRED 415 (540)
T ss_pred CCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcC-------------CCceeccceEEEcCC
Confidence 999999999887631 135688999999999999999999999999995 689999999999999
Q ss_pred CeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCC---HH----HHH
Q psy14338 547 GLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCS---EE----ESF 618 (1761)
Q Consensus 547 G~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~---~~----~l~ 618 (1761)
|+++|+||.|++||++|+||+|.|||+.|..++.| .+|+|++.++. .++.++++++..+..+ .+ .+.
T Consensus 416 g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V-----~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~ 490 (540)
T PRK05857 416 GFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGV-----REAACYEIPDEEFGALVGLAVVASAELDESAARALKHTIA 490 (540)
T ss_pred ceEEEeccccccEecCCEEECHHHHHHHHHhCCCe-----eEEEEEecCccccccceEEEEEeCCCCChhhHHHHHHHHH
Confidence 99999999999999999999999999999988877 79999998854 4566777777654432 22 344
Q ss_pred HHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 619 QWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 619 ~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+++++.|+.|++|..+ +.++++|+|++||+||++|++.+..
T Consensus 491 ~~~~~~l~~~~~P~~v-------~~~~~iP~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 491 ARFRRESEPMARPSTI-------VIVTDIPRTQSGKVMRASLAAAATA 531 (540)
T ss_pred HHHHhhhccccCCeEE-------EEhhcCCCCCCcceeHHHHHHhhhh
Confidence 4566779999999986 5569999999999999999988754
|
|
| >PRK12476 putative fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-60 Score=629.33 Aligned_cols=545 Identities=22% Similarity=0.336 Sum_probs=405.7
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCC----CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTR----SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLI 1238 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~----~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~i 1238 (1761)
.++++.+.+++. ++|+++|+++.+.. +..+.+||+||.++++++|++|.+. +++||+|+++++|+++++
T Consensus 34 ~~~~~~~~~~~~-----~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~--~~~gd~V~l~~~n~~e~~ 106 (612)
T PRK12476 34 TTLISLIERNIA-----NVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV--AGPGDRVAILAPQGIDYV 106 (612)
T ss_pred CcHHHHHHHHHH-----hCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh--cCCCCEEEEECCCChhHH
Confidence 345555554443 67999999865421 1235899999999999999999874 899999999999999999
Q ss_pred HHHHHHHHcCCEEEeC-CCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc----ccccccCCccccCCC
Q psy14338 1239 CAFYGCLYVGAVPVTI-RPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN----VVDIKSWPTILDTDD 1313 (1761)
Q Consensus 1239 va~lA~l~aG~~~vpl-dp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 1313 (1761)
+++|||+++|++++|+ +|.+|. ..+++.+++++++++++|++......+....... ......+......
T Consensus 107 ~~~lA~~~aG~v~vpl~~~~~~~----~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 180 (612)
T PRK12476 107 AGFFAAIKAGTIAVPLFAPELPG----HAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPDS-- 180 (612)
T ss_pred HHHHHHHHcCceeEecCCCCcch----hHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEecccccc--
Confidence 9999999999999999 576551 1349999999999999999987655433221100 0000000000000
Q ss_pred CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC-cCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1314 MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE-LYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1314 ~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
. ..........+++++||+|||||||+||||+++|+++.+.+......++ +.++++.+.++|++|.+++. .++.+
T Consensus 181 -~--~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~-~~~~~ 256 (612)
T PRK12476 181 -A--GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLS-MIGFP 256 (612)
T ss_pred -c--cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchH-HHHHH
Confidence 0 0001112346789999999999999999999999999988877777778 78888999999999999884 45566
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHH--hcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVS--QYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRI 1470 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~--~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~ 1470 (1761)
++.|++++++.+..+.++|..|++.++ ++++|+++.+|+++..++.... . .......++++|| +++||+++++
T Consensus 257 ~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~--~-~~~~~~~~l~~lr-~~~gg~~~~~- 331 (612)
T PRK12476 257 AVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRG--L-PAEGDDIDLSNVV-LIIGSEPVSI- 331 (612)
T ss_pred HhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhc--C-hhhhcCcchhHhe-EEecccCCCH-
Confidence 667777777764333358999999995 5899999999998887765210 0 0011244688999 9999999999
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCc
Q psy14338 1471 HLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGV 1550 (1761)
Q Consensus 1471 ~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 1550 (1761)
.+.++|.+.|..+|.....+++.||+||++.++.......+....+.+...+..+....+....+...+.+++|+|++|+
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~ 411 (612)
T PRK12476 332 DAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQ 411 (612)
T ss_pred HHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCC
Confidence 88899999998777665679999999998765433221111111111111122221111122222333446799999999
Q ss_pred EEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhccc----------CCCCCceEeeCceeEEec
Q psy14338 1551 KVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT----------GNTGELYARTGYLGFLRR 1620 (1761)
Q Consensus 1551 ~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~----------~~~~~~~yrTGDlg~~~~ 1620 (1761)
+++|+|+++++++|.|++|||+|+|++++.|||| +|+.|+++|...+.. .+++++||+|||+|++
T Consensus 412 ~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~---~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-- 486 (612)
T PRK12476 412 WAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWG---RPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-- 486 (612)
T ss_pred EEEEEeCCCCcCCCCCCEEEEEEcCCcccccccC---ChHHHHHHHhhhhccccccccccccccCCCCeeecccccee--
Confidence 9999997768999999999999999999999999 999999999643211 1124579999999998
Q ss_pred cCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHH-hccCcce--eEEEee----CCeEEEEEEe
Q psy14338 1621 TSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMR-AHKKIAE--CAVFTW----TNLLVVVVEL 1693 (1761)
Q Consensus 1621 ~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~-~~p~V~~--a~Vv~~----~~~~~a~v~~ 1693 (1761)
+ | |+ |+|+||+||+||++|+||+|.|||+ ++. .||.|.+ ++|++. ++.++++|+.
T Consensus 487 ----~-d--------G~----l~i~GR~~d~I~~~G~~I~p~eIE~-~l~~~~p~V~~~~v~v~~~~~~~~~~~~~~v~~ 548 (612)
T PRK12476 487 ----L-D--------GE----LYITGRIADLIVIDGRNHYPQDIEA-TVAEASPMVRRGYVTAFTVPAEDNERLVIVAER 548 (612)
T ss_pred ----E-C--------CE----EEEEeccCcEEEECCcccCHHHHHH-HHHHhcccccCCcEEEEEecCCCcceEEEEEEe
Confidence 5 8 99 9999999999999999999999999 776 5899999 555654 4578888886
Q ss_pred CCC--chhHhhHHHHHHHHHhhhcCce-eeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCC
Q psy14338 1694 DGN--ESEALDLVPLVTNAVLEEHHLI-VGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 1753 (1761)
Q Consensus 1694 ~~~--~~~~~~l~~~l~~~~Lp~~~~v-P~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~ 1753 (1761)
... ..+.++|.++++++ |...|++ |..+++++.++||+|++|||+|++|++++.++.+.
T Consensus 549 ~~~~~~~~~~~l~~~~~~~-l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 610 (612)
T PRK12476 549 AAGTSRADPAPAIDAIRAA-VSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGRLG 610 (612)
T ss_pred cCCcccccHHHHHHHHHHH-HHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCCCC
Confidence 432 25667899999997 6546887 68889997446999999999999999999888754
|
|
| >PRK06060 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-61 Score=645.83 Aligned_cols=463 Identities=19% Similarity=0.255 Sum_probs=382.1
Q ss_pred CCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1180 GAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
.+||++|+. .+ ..+||+||+++++++|++|.+. |+++|++|+|+++|++++++++|||+++|++++|+||.+|
T Consensus 18 ~~pd~~a~~-----~~-~~~Ty~eL~~~~~~lA~~L~~~-g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~~~ 90 (705)
T PRK06060 18 GWYDRPAFY-----AA-DVVTHGQIHDGAARLGEVLRNR-GLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPELH 90 (705)
T ss_pred cCCCceEEE-----ec-CceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCCCC
Confidence 379999998 32 3799999999999999999999 9999999999999999999999999999999999999988
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccC
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVS 1339 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSG 1339 (1761)
.+ ++.+++++++++++|++......+.... .... ........ . ..+.......++++|||+||||
T Consensus 91 ~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~---~~~~~~~~-~--~~~~~~~~~~~~~~a~il~TSG 155 (705)
T PRK06060 91 RD------DHALAARNTEPALVVTSDALRDRFQPSR---VAEA---AELMSEAA-R--VAPGGYEPMGGDALAYATYTSG 155 (705)
T ss_pred HH------HHHHHHhcCCCcEEEEchHHhhhhcccc---cchh---hhhhhhcc-c--cCCCCCCCCCCCCeEEEEECCC
Confidence 88 9999999999999999877654432211 0000 00000000 0 0001112346789999999999
Q ss_pred CCCCCceEEccHHHHHHHHHHHH-HHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHH
Q psy14338 1340 TTGMLAGIKMSHAAVTSLCRSMK-LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418 (1761)
Q Consensus 1340 STG~PKgV~~sh~~l~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i 1418 (1761)
|||+||||+++|+++.+.+.++. ..+++.+.|+++...+++|.+++...++.+|..|+++++.+. .+++..+...+
T Consensus 156 STG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~~i 232 (705)
T PRK06060 156 TTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSA---PVTPEAAAILS 232 (705)
T ss_pred CCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCC---CCCHHHHHHHH
Confidence 99999999999999998887664 568888989999889999888876778899999999999874 36889999999
Q ss_pred HhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccc
Q psy14338 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498 (1761)
Q Consensus 1419 ~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE 1498 (1761)
+++++|+++++|+++..+++.. ....+++||.+++|||++++ .+.++|.+.++. ..++|.||+||
T Consensus 233 ~~~~~t~~~~~P~~l~~l~~~~---------~~~~~~slr~i~~gGe~l~~-~~~~~~~~~~~~-----~~~~~~YG~tE 297 (705)
T PRK06060 233 ARFGPSVLYGVPNFFARVIDSC---------SPDSFRSLRCVVSAGEALEL-GLAERLMEFFGG-----IPILDGIGSTE 297 (705)
T ss_pred HhcCCeEEeeHHHHHHHHHHhc---------ccccccceeEEEEecCcCCH-HHHHHHHHHcCC-----CceEeeeeccc
Confidence 9999999999999999987631 23457899999999999999 788888877642 57999999999
Q ss_pred cceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcc
Q psy14338 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHN 1578 (1761)
Q Consensus 1499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v 1578 (1761)
++.++..... ...+.+++|+|+++++++|+|++ ++++|.|+.|||||+|+++
T Consensus 298 ~~~~~~~~~~---------------------------~~~~~~~iG~p~~~~~v~i~d~~-g~~~~~g~~GEl~i~g~~v 349 (705)
T PRK06060 298 VGQTFVSNRV---------------------------DEWRLGTLGRVLPPYEIRVVAPD-GTTAGPGVEGDLWVRGPAI 349 (705)
T ss_pred cCceEEeccC---------------------------CCCCcCcccccCCCcEEEEECCC-CCCCCCCCceEEEEccchh
Confidence 7643321100 00113459999999999999966 8999999999999999999
Q ss_pred cccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCee
Q psy14338 1579 ASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMR 1658 (1761)
Q Consensus 1579 ~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~r 1658 (1761)
++|||| +|+.+. .++|||+|||+|++ ++| |+ ++|+||+|||||++|+|
T Consensus 350 ~~GY~~---~~~~~~-----------~~~~~~~TGDl~~~------~~d--------G~----l~~~GR~dd~ik~~G~~ 397 (705)
T PRK06060 350 AKGYWN---RPDSPV-----------ANEGWLDTRDRVCI------DSD--------GW----VTYRCRADDTEVIGGVN 397 (705)
T ss_pred hhhhhC---CCcccc-----------cCCCcEECCeeEEE------CCC--------ce----EEEecccCceEEECCEE
Confidence 999999 887542 24789999999999 999 99 99999999999999999
Q ss_pred cChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCC-ch---hHhhHHHHHHHHHhhhcCceeeEEEEECCCC
Q psy14338 1659 YHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN-ES---EALDLVPLVTNAVLEEHHLIVGVAVVVDPGV 1729 (1761)
Q Consensus 1659 I~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~-~~---~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~ 1729 (1761)
|+|.|||+ ++.+||+|.+|+|++.. +.+++||+.... .. ...+++++|+++ || .||+|..|++++ +
T Consensus 398 v~~~eIE~-~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~-L~-~~~~P~~i~~v~--~ 472 (705)
T PRK06060 398 VDPREVER-LIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNR-LS-AFKVPHRFAVVD--R 472 (705)
T ss_pred ECHHHHHH-HHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHh-CC-CCcCCcEEEEee--c
Confidence 99999999 89999999999999753 478888876422 22 235788899987 88 999999999999 9
Q ss_pred ccCCCchhhhHHHHHHHH
Q psy14338 1730 VPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1730 lP~t~~GKvdR~~L~~~~ 1747 (1761)
||+|+|||+||++|++.+
T Consensus 473 iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 473 LPRTPNGKLVRGALRKQS 490 (705)
T ss_pred CCCCcchhhHHHHHHhhc
Confidence 999999999999999865
|
|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-61 Score=644.13 Aligned_cols=496 Identities=16% Similarity=0.193 Sum_probs=391.6
Q ss_pred hhHHHHHHHHhhhcCC-CcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGSATYK-APVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd-~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.++.++|.++++++|+ ++|+...+ + +.+||+||+++++++|+.|+ +. +++||+|+|+++|+ ++
T Consensus 204 ~t~~~~l~~~~~~~p~~~~a~~~~~--~---~~~Ty~el~~~~~~lA~~L~--------~~-~~~gd~Val~~~n~--~e 267 (718)
T PRK08043 204 ETLYEALLSAQYRYGAGKPCIEDVN--F---TPDSYRKLLKKTLFVGRILE--------KY-SVEGERIGLMLPNA--TI 267 (718)
T ss_pred CCHHHHHHHHHHHhCCCCcceEcCC--C---CcccHHHHHHHHHHHHHHHH--------Hh-cCCCceEEEEcCCc--HH
Confidence 5789999999999998 57876321 1 47999999999999999998 65 59999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCc--cccc----ccceeccCCCc-cee
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLP--KTAA----GEVVAFKGWPK-LTW 232 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~--~~~~----~~~~~~~~~~~-~~~ 232 (1761)
+++++|||+++|+++||+++.++.+ ++++++++++++++|++....+... .... ...+....... ..+
T Consensus 268 ~~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 342 (718)
T PRK08043 268 SAAVIFGASLRRRIPAMMNYTAGVK-----GLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTT 342 (718)
T ss_pred HHHHHHHHHHcCCcccccccCcCHH-----HHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcch
Confidence 9999999999999999999999876 8999999999999999876543211 0000 00111110000 000
Q ss_pred EEecc-c--cCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 233 FVTEH-L--AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 233 ~~~~~-~--~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
.+. . ..............++|+|||+|||||||.||||+++|+++.+.+.+....++++++|++++++|++|.++
T Consensus 343 --~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g 420 (718)
T PRK08043 343 --ADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFG 420 (718)
T ss_pred --hHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhh
Confidence 000 0 00000001112346799999999999999999999999999999988888889999999999999999999
Q ss_pred hHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCC
Q psy14338 310 LWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWS 389 (1761)
Q Consensus 310 ~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~ 389 (1761)
+...++.+|..|+++++.+. .+++..+.+.+.++++|++..+|+ ++..+.... ...++++||.+++| |++++
T Consensus 421 ~~~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~vt~~~~~p~-~~~~l~~~~--~~~~~~~lr~i~~g--g~~l~ 492 (718)
T PRK08043 421 LTVGLFTPLLTGAEVFLYPS---PLHYRIVPELVYDRNCTVLFGTST-FLGNYARFA--NPYDFARLRYVVAG--AEKLQ 492 (718)
T ss_pred hHHHHHHHHHcCCEEEEeCC---cccHHHHHHHHHhcCCeEEEchHH-HHHHhhhhc--CcccccceEEEEEe--CccCC
Confidence 86568999999999999873 356788899999999999999964 666554431 23567899999999 99999
Q ss_pred HHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCC
Q psy14338 390 LSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQV 469 (1761)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 469 (1761)
+++.++|.+.+ |++ ++|.||+||++.+++..... ..+..++|+|
T Consensus 493 ~~~~~~~~~~~---g~~---l~~~YG~TE~~~~~~~~~~~------------------------------~~~~~svG~p 536 (718)
T PRK08043 493 ESTKQLWQDKF---GLR---ILEGYGVTECAPVVSINVPM------------------------------AAKPGTVGRI 536 (718)
T ss_pred HHHHHHHHHHc---CCC---eecccCcccccceEEecCCc------------------------------ccCCCCCCCc
Confidence 99999999887 554 99999999998665433210 1235789999
Q ss_pred CCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccC--CCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 470 MPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWG--LPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 470 ~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~--~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
++|++++|+|+++. |+.|||+|+|++++.|||+ +|+.+...+...... ...+|||+|||+|++|+||
T Consensus 537 ~pg~~~~i~d~~~~------~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~-----~~~~gw~~TGDlg~~d~dG 605 (718)
T PRK08043 537 LPGMDARLLSVPGI------EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARG-----EMERGWYDTGDIVRFDEQG 605 (718)
T ss_pred CCCCeeEEecCCCC------CCceEEEEecCCccccccCCCCcccccccccccccc-----cccCCeEecCCEEEEcCCC
Confidence 99999999997653 4669999999999999999 565433222111000 0136899999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCCHHHHHHHHHHH-H
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCSEEESFQWMSRV-L 625 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~~~~l~~~l~~~-L 625 (1761)
+++|+||+||+||++|+||+|.|||+.+.+++++ .+++|++.++ ..++.+++++. ....+.++++++++++ |
T Consensus 606 ~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~-----~~~avv~~~~~~~ge~~v~~~~-~~~~~~~~l~~~~~~~~l 679 (718)
T PRK08043 606 FVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPD-----KQHATAIKSDASKGEALVLFTT-DSELTREKLQQYAREHGV 679 (718)
T ss_pred cEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCcc-----ceEEEEEccCCCCCceEEEEEc-CcccCHHHHHHHHHhcCC
Confidence 9999999999999999999999999999998888 4677777774 46777887765 3456788999999987 9
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
|.||+|..+ +.+++||+|++||+||++|++.+.+.
T Consensus 680 ~~~~vP~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~~ 714 (718)
T PRK08043 680 PELAVPRDI-------RYLKQLPLLGSGKPDFVTLKSMVDEP 714 (718)
T ss_pred CcccCCceE-------EEecccCcCCCCCcCHHHHHHHHhcc
Confidence 999999986 55699999999999999999987653
|
|
| >TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-61 Score=632.89 Aligned_cols=495 Identities=13% Similarity=0.144 Sum_probs=382.1
Q ss_pred cCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCe
Q psy14338 94 TYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIV 173 (1761)
Q Consensus 94 ~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~ 173 (1761)
.++++|+++.+.+|. .+++||+||.++++++|+.|+ +.|+++||+|+++++|+ +++++++|||+++|++
T Consensus 97 ~~~~~a~~~~~~~~~-~~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~GdrV~i~~~n~--~e~~~~~lA~~~~Gav 165 (652)
T TIGR01217 97 AGTEPALLYVDETHE-PAPVTWAELRRQVASLAAALR--------ALGVRPGDRVSGYLPNI--PQAVVAMLATASVGAI 165 (652)
T ss_pred CCCCeEEEEECCCCC-eeEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHHHHHHHHHHHhCeE
Confidence 578999998765443 268999999999999999999 88999999999999999 9999999999999999
Q ss_pred EEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc---------Ccc----cc-cccceeccCCC-c-------ce
Q psy14338 174 PVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG---------LPK----TA-AGEVVAFKGWP-K-------LT 231 (1761)
Q Consensus 174 ~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~---------~~~----~~-~~~~~~~~~~~-~-------~~ 231 (1761)
++|++|.++.+ ++.+++++++++++|+++..... +.. .. ...++...... . ..
T Consensus 166 ~vp~~~~~~~~-----~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 240 (652)
T TIGR01217 166 WSSCSPDFGAR-----GVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDG 240 (652)
T ss_pred EEecCCCCCHH-----HHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccC
Confidence 99999999976 89999999999999998754211 100 00 00111111000 0 00
Q ss_pred eE-EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHH-HHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 232 WF-VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAML-SHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 232 ~~-~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
.. ..+................+++++||+|||||||+||||+++|++++ +.+......++++++|++++++|++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 320 (652)
T TIGR01217 241 ALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW 320 (652)
T ss_pred cccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh
Confidence 00 01111110111111223456899999999999999999999999965 44555666789999999999999999865
Q ss_pred hHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCC--CCCCCCCCceeEEEecCCCcc
Q psy14338 310 LWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK--DHKDISLSSLRLLLVGDGANP 387 (1761)
Q Consensus 310 ~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~--~~~~~~l~~Lr~v~~gg~Ge~ 387 (1761)
.+ ++.+|+.|+++++++......++..++++++++++|++.. ||+++..+.... .....++++||.+++| |++
T Consensus 321 ~~--~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~-~p~~~~~l~~~~~~~~~~~~l~sLr~i~~g--Ge~ 395 (652)
T TIGR01217 321 NW--LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGT-SAKYVMACRKAGVHPARTHDLSALQCVAST--GSP 395 (652)
T ss_pred HH--HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEec-CHHHHHHHHhcCCCccccCChhheeEEEee--cCC
Confidence 33 6689999999999863221347899999999999999855 565655544321 1234578999999999 999
Q ss_pred CCHHHHHHHHHHhhhCCCCCCccccccccccccceEee-cCCCCCcccCCCccccccCcccceeeecCCCccCccccccc
Q psy14338 388 WSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR-RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDC 466 (1761)
Q Consensus 388 l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 466 (1761)
+++++.+.+.+.++. ++ .+.+.||+||++..... .+. .....+++
T Consensus 396 l~~~~~~~~~~~~~~-~~---~~~~~yG~TE~~~~~~~~~~~------------------------------~~~~~g~~ 441 (652)
T TIGR01217 396 LPPDGFRWVYDEIKA-DV---WLASISGGTDICSCFAGANPT------------------------------LPVHIGEI 441 (652)
T ss_pred CCHHHHHHHHHHhCC-Cc---eEEeccCHHHHhccccCCCCC------------------------------CCCcCCcc
Confidence 999999999888742 12 37799999997422211 110 01234678
Q ss_pred CCCCCCcEEEEEeCCCCcccCCCCCceEEEEecC--CccccccCCCccccccccccccccCCCccCCCceEeecceEEEe
Q psy14338 467 GQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAST--GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLG 544 (1761)
Q Consensus 467 G~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~--~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~ 544 (1761)
|.|.+|++++|+|++|++ + .|+.|||+|+|| +++.||||+|+.|+ |....|. ..++||+|||+|++|
T Consensus 442 g~p~~g~~v~ivd~~g~~--~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~--~~~~~~~------~~~g~~~tGDlg~~d 510 (652)
T TIGR01217 442 QAPGLGTAVQSWDPEGKP--V-TGEVGELVCTNPMPSMPIRFWNDPDGSK--YRDAYFD------TYPGVWRHGDWITLT 510 (652)
T ss_pred CCCcCCCceEEECCCCCC--C-CCCccEEEEecCCCccccceeCCCccch--hHHhhhc------CCCCEEEcCCcEEEC
Confidence 999999999999999984 5 499999999996 69999999999764 1111111 115799999999999
Q ss_pred CCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCC--CH---HHHH
Q psy14338 545 PGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDC--SE---EESF 618 (1761)
Q Consensus 545 ~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~--~~---~~l~ 618 (1761)
+||+|+|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++. .++.+++||++.++. +. ++++
T Consensus 511 ~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V-----~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~ 585 (652)
T TIGR01217 511 PRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEV-----RESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIK 585 (652)
T ss_pred CCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCc-----ceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999888 79999999854 678999999987653 22 5799
Q ss_pred HHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 619 QWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 619 ~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++++++|+.|++|+.| +.+++||+|+||||+|+.|++.+..
T Consensus 586 ~~~~~~l~~~~~P~~i-------~~v~~lP~T~sGKi~r~~Lr~~~~~ 626 (652)
T TIGR01217 586 RTIRAGLSPRHVPDEI-------IEVPGIPHTLTGKRVEVAVKRVLQG 626 (652)
T ss_pred HHHHhhCCCCcCCCEE-------EECCCCCCCCCccChHHHHHHHHcC
Confidence 9999999999999987 4569999999999999999998754
|
This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway. |
| >PRK00174 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-61 Score=635.25 Aligned_cols=498 Identities=15% Similarity=0.155 Sum_probs=391.4
Q ss_pred CCCCCCCceEEccCC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1179 AGAPVPPGVSSVDTR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
+++|+++|+++.+.. ...+++||+||+++++++|+.|++. |+++||+|+++++|++++++++|||+++|++++|++|.
T Consensus 78 ~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~ 156 (637)
T PRK00174 78 KTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSL-GVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGG 156 (637)
T ss_pred ccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCC
Confidence 367999999863321 2456899999999999999999998 99999999999999999999999999999999999998
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHH---------HHHhhh----ccc-cccccccCCccccC---CC------C
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI---------KLLKSK----EAS-NVVDIKSWPTILDT---DD------M 1314 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~---------~~~~~~----~~~-~~~~~~~~~~~~~~---~~------~ 1314 (1761)
+|.+ ++.+++++++++++|+++... +.+... ... .++........... .. .
T Consensus 157 ~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (637)
T PRK00174 157 FSAE------ALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWVEGRDLWWHELV 230 (637)
T ss_pred CCHH------HHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCCCcccHHHHH
Confidence 8877 999999999999999976432 111110 000 00000000000000 00 0
Q ss_pred ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHH-HHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHh
Q psy14338 1315 PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR-SMKLACELYPSRHIALCLDPYCGLGFALWVLSSV 1393 (1761)
Q Consensus 1315 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L 1393 (1761)
.............+++++||+|||||||+||||+++|++++..+. .....+++.++|+++...+++|..+..+.++.+|
T Consensus 231 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l 310 (637)
T PRK00174 231 AGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPL 310 (637)
T ss_pred hhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHH
Confidence 000001112235678999999999999999999999999875543 4455678888898888888888888767789999
Q ss_pred hcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHH
Q psy14338 1394 YSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473 (1761)
Q Consensus 1394 ~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~ 1473 (1761)
++|+++++.+.....+++..+++.|+++++|++.++|++++.|++... ......++++||.+++|||++++ ++.
T Consensus 311 ~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-----~~~~~~~~~~lr~i~~~Ge~l~~-~~~ 384 (637)
T PRK00174 311 ANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGD-----EHPKKYDLSSLRLLGSVGEPINP-EAW 384 (637)
T ss_pred HcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCC-----cccccCCccceeEEEEeCCCCCH-HHH
Confidence 999999998643324689999999999999999999999999976321 11234568899999999999999 777
Q ss_pred HHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEE
Q psy14338 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVI 1553 (1761)
Q Consensus 1474 ~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 1553 (1761)
+++.+.+ |..++.+++.||+||++..++...... ...+.+++|+|++|++++
T Consensus 385 ~~~~~~~---~~~~~~i~~~YG~TE~~~~~~~~~~~~-------------------------~~~~~~~vG~p~~g~~~~ 436 (637)
T PRK00174 385 EWYYKVV---GGERCPIVDTWWQTETGGIMITPLPGA-------------------------TPLKPGSATRPLPGIQPA 436 (637)
T ss_pred HHHHHHh---CCCCCceEecccccccCCceEecCCCC-------------------------CCcCCCcccCCCCCceEE
Confidence 7776665 333468999999999876543221100 001124599999999999
Q ss_pred EEcCCCCCCCCCCcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCC
Q psy14338 1554 IANPETKGQCGDSHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPV 1631 (1761)
Q Consensus 1554 v~d~~~~~~~p~G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~ 1631 (1761)
|+|++ ++++|.|+.|||+|+| |++++|||| +|+.+.+.|.. ..+|||+|||+|++ |+|
T Consensus 437 i~d~~-g~~~~~g~~Gel~v~g~~p~~~~gy~~---~~~~~~~~~~~------~~~g~~~TGDl~~~------d~d---- 496 (637)
T PRK00174 437 VVDEE-GNPLEGGEGGNLVIKDPWPGMMRTIYG---DHERFVKTYFS------TFKGMYFTGDGARR------DED---- 496 (637)
T ss_pred EECCC-CCCCCCCCcEEEEEcCCCCcccccccC---CHHHHHHhhhc------CCCCEEECCceEEE------cCC----
Confidence 99965 8999999999999999 699999999 99888777632 24689999999999 999
Q ss_pred CCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc-h---hHhh
Q psy14338 1632 PPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE-S---EALD 1702 (1761)
Q Consensus 1632 ~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~-~---~~~~ 1702 (1761)
|+ ++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|++.... . ..++
T Consensus 497 ----G~----l~~~GR~dd~ik~~G~~v~p~eIE~-~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~ 567 (637)
T PRK00174 497 ----GY----YWITGRVDDVLNVSGHRLGTAEIES-ALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKE 567 (637)
T ss_pred ----Cc----EEEEEecccEEEeCCEEECHHHHHH-HHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 45788998875322 1 2468
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
|+++|+++ |+ .||+|..|++++ +||+|+|||++|++|++.+.+.
T Consensus 568 l~~~l~~~-l~-~~~~P~~i~~v~--~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 568 LRNWVRKE-IG-PIAKPDVIQFAP--GLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred HHHHHHhh-cC-CccCCCEEEEcC--CCCCCCCcchHHHHHHHHHcCC
Confidence 99999987 88 999999999999 9999999999999999987544
|
|
| >PRK05852 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-60 Score=620.72 Aligned_cols=507 Identities=19% Similarity=0.213 Sum_probs=405.5
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|+++++++|+++|+++.++. +.+||+||.++++++|+.|. +.|+++|++|+|+++|+ ++
T Consensus 15 ~~~l~~~l~~~a~~~p~~~ai~~~~~~----~~~Ty~~l~~~~~~~a~~L~--------~~gv~~gd~V~i~~~n~--~~ 80 (534)
T PRK05852 15 GPRIADLVEVAATRLPEAPALVVTADR----IAISYRDLARLVDDLAGQLT--------RSGLLPGDRVALRMGSN--AE 80 (534)
T ss_pred cccHHHHHHHHHHhCCCCcEEEecCCC----CcccHHHHHHHHHHHHHHHH--------hcCCCCCCEEEEECCCc--HH
Confidence 367999999999999999999875432 47999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc---cceeccCCC--cceeEE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG---EVVAFKGWP--KLTWFV 234 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~ 234 (1761)
+++++|||+++|++++|++|.++.+ ++.+++++++++++|++............. ..+...... ......
T Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (534)
T PRK05852 81 FVVALLAASRADLVVVPLDPALPIA-----EQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLS 155 (534)
T ss_pred HHHHHHHHHHcCcEEeecCCCCCcH-----HHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccc
Confidence 9999999999999999999999977 899999999999999876432211110000 000000000 000000
Q ss_pred ecccc-CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHH
Q psy14338 235 TEHLA-KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHS 313 (1761)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 313 (1761)
..... ..+..........++++|+|+|||||||.||||+++|+++.+.+......+++.++|++++++|++|..+++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 235 (534)
T PRK05852 156 VHLDAATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAA 235 (534)
T ss_pred cccccccCCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHH
Confidence 00000 00000001111235788999999999999999999999999999988888999999999999999999999877
Q ss_pred HHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCC--CCCCCceeEEEecCCCccCCHH
Q psy14338 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK--DISLSSLRLLLVGDGANPWSLS 391 (1761)
Q Consensus 314 i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~--~~~l~~Lr~v~~gg~Ge~l~~~ 391 (1761)
++.+++.|+++++++.. .+++..+++.|+++++|+++++| +++..++...... ..+.+++|.+++| |++++++
T Consensus 236 ~~~~l~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~~~lr~i~~~--G~~~~~~ 310 (534)
T PRK05852 236 LLATLASGGAVLLPARG--RFSAHTFWDDIKAVGATWYTAVP-TIHQILLERAATEPSGRKPAALRFIRSC--SAPLTAE 310 (534)
T ss_pred HHHHHhcCCeEEeCCCc--CcCHHHHHHHHHHcCCcEEEcCh-HHHHHHHhhcccccccccCCCeeEEEEC--CCCCCHH
Confidence 89999999998886532 57899999999999999999996 4777776543221 2356899999999 9999999
Q ss_pred HHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCC
Q psy14338 392 SCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP 471 (1761)
Q Consensus 392 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 471 (1761)
+.+.|.+.+ |.+ +++.||+||++..++....... .. ........+..|+ .+
T Consensus 311 ~~~~~~~~~---~~~---v~~~YG~tE~~~~~~~~~~~~~---------------------~~-~~~~~~~~g~~g~-~~ 361 (534)
T PRK05852 311 TAQALQTEF---AAP---VVCAFGMTEATHQVTTTQIEGI---------------------GQ-TENPVVSTGLVGR-ST 361 (534)
T ss_pred HHHHHHHHh---CCC---hhhccCccccchhhhcCCcccc---------------------cc-ccCcccccccCCC-CC
Confidence 999999988 443 9999999999865443221000 00 0000112334455 68
Q ss_pred CcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEE
Q psy14338 472 GCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFV 551 (1761)
Q Consensus 472 ~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~ 551 (1761)
|++++|+|++++ ++|.|+.|||+|+|+++++||+++|+.|++.|. ++||||||+|++|+||+++|
T Consensus 362 g~~~~i~d~~g~--~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~-------------~g~~~TGD~~~~d~dG~l~~ 426 (534)
T PRK05852 362 GAQIRIVGSDGL--PLPAGAVGEVWLRGTTVVRGYLGDPTITAANFT-------------DGWLRTGDLGSLSAAGDLSI 426 (534)
T ss_pred CCeEEEECCCCC--CCCCCCceEEEEecCcccchhcCCcccchhhhc-------------CCCcccCceEEEeCCCcEEE
Confidence 999999999987 589999999999999999999999999999984 68999999999999999999
Q ss_pred EeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHh
Q psy14338 552 CGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVLQAV 628 (1761)
Q Consensus 552 ~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y 628 (1761)
.||+||+||++|.+|+|.|||+.+.+++.| .+|+|++.++. .++.++++++..+. .+.+++.++++++||.|
T Consensus 427 ~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V-----~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~~~~i~~~~~~~l~~~ 501 (534)
T PRK05852 427 RGRIKELINRGGEKISPERVEGVLASHPNV-----MEAAVFGVPDQLYGEAVAAVIVPRESAPPTAEELVQFCRERLAAF 501 (534)
T ss_pred EecchhhEEECCEEECHHHHHHHHHhCCCe-----eeEEEEecCCcCcCceEEEEEEECCCCCCCHHHHHHHHHHhcccc
Confidence 999999999999999999999999998888 79999999854 56788888887543 67889999999999999
Q ss_pred hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 629 DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 629 ~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++|..+ +.++++|+|++||++|++|++.+..
T Consensus 502 ~~P~~i-------~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 502 EIPASF-------QEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred cCCeEE-------EEhhhcCCCCCccccHHHHHHHhcc
Confidence 999986 5569999999999999999998753
|
|
| >PRK09274 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-61 Score=627.73 Aligned_cols=519 Identities=18% Similarity=0.189 Sum_probs=398.4
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCC----ceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCC
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNG----KLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNND 156 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g----~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~ 156 (1761)
.++.++|.+.++++|+++|+++.+..+ ...+.+||+||+++++++|++|+ +.|+++||+|+++++|+
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~--------~~g~~~gd~V~~~~~n~- 76 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLN--------AAGIGRGMRAVLMVTPS- 76 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCc-
Confidence 468899999999999999998765321 01137999999999999999999 88999999999999999
Q ss_pred chhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccc--ccccCcccc---cccceeccCC-Ccc
Q psy14338 157 PINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDA--CLKGLPKTA---AGEVVAFKGW-PKL 230 (1761)
Q Consensus 157 ~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~--~~~~~~~~~---~~~~~~~~~~-~~~ 230 (1761)
+++++++|||+++|+++||++|.++.+ ++.+++++++++++|+++. ....+.... ...++..... ...
T Consensus 77 -~~~~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 150 (552)
T PRK09274 77 -LEFFALTFALFKAGAVPVLVDPGMGIK-----NLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWG 150 (552)
T ss_pred -HHHHHHHHHHHHcCeEEEEcCCCccHH-----HHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccC
Confidence 999999999999999999999999876 8999999999999999752 111111100 0011111100 000
Q ss_pred eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhh
Q psy14338 231 TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
.....+................+++++||+|||||||.||||+++|+++.+.+.+....+++.++|+++..+|++|..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~-- 228 (552)
T PRK09274 151 GTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALF-- 228 (552)
T ss_pred CccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhh--
Confidence 000011110111111122345678999999999999999999999999999999888889999999999999876533
Q ss_pred HHHHHHHHhcCcEEEEeCCc---cccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCcc
Q psy14338 311 WHSVLTSVLNGMHAVYIPYA---LMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANP 387 (1761)
Q Consensus 311 ~~~i~~~L~~G~~lvi~~~~---~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~ 387 (1761)
.+..|+++++.+.. ...+++..+++.|+++++|+++++| +++..++........++++||.+++| |++
T Consensus 229 ------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~g--G~~ 299 (552)
T PRK09274 229 ------GPALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSP-ALLERLGRYGEANGIKLPSLRRVISA--GAP 299 (552)
T ss_pred ------hhhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccH-HHHHHHHHHhhhcCCCCchhhEEEec--CCc
Confidence 24568898886521 1146899999999999999999996 58877776554445678999999999 999
Q ss_pred CCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccC
Q psy14338 388 WSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCG 467 (1761)
Q Consensus 388 l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 467 (1761)
+++++.++|.+.++. |. .++|.||+||++.+++........ ............++|
T Consensus 300 ~~~~~~~~~~~~~~~-~~---~~~~~YG~TE~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~vG 355 (552)
T PRK09274 300 VPIAVIERFRAMLPP-DA---EILTPYGATEALPISSIESREILF--------------------ATRAATDNGAGICVG 355 (552)
T ss_pred CCHHHHHHHHHHcCC-Cc---eEEccccccccceeEeecchhhhc--------------------cccccccCCCCcccC
Confidence 999999999998853 22 499999999998765533210000 000000011234799
Q ss_pred CCCCCcEEEEEeCCCC-------cccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecce
Q psy14338 468 QVMPGCIMTVVKMDSP-------SYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLL 540 (1761)
Q Consensus 468 ~p~~~~~~~I~d~~~~-------~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl 540 (1761)
+|++|++++|+|+++. ..++|.|++|||+|+|++++.||||+|+.|+..|..++. +.+||+|||+
T Consensus 356 ~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~--------g~~w~~TGDl 427 (552)
T PRK09274 356 RPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQ--------GDVWHRMGDL 427 (552)
T ss_pred ccCCCceEEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCC--------CCcEEEcCCE
Confidence 9999999999996321 136899999999999999999999999999998864431 1359999999
Q ss_pred EEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC--CCHHHHH
Q psy14338 541 GFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD--CSEEESF 618 (1761)
Q Consensus 541 ~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~--~~~~~l~ 618 (1761)
|++|+||+|+|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++..++.++++|+..++ .+.++++
T Consensus 428 g~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V-----~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 502 (552)
T PRK09274 428 GYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGV-----KRSALVGVGVPGAQRPVLCVELEPGVACSKSALY 502 (552)
T ss_pred EEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCccc-----ceeEEEEeCCCCCceEEEEEEccCccccchHHHh
Confidence 99999999999999999999999999999999999998888 7999999987667788888887664 4566788
Q ss_pred HHHHHHHHHhhhcceeeeeEEEEeCCCCccCC--CCCcccHHHHHHHHHc
Q psy14338 619 QWMSRVLQAVDSIHQVGLYCLALVPPNYLPKT--PLGGIHLSECKRRFLE 666 (1761)
Q Consensus 619 ~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t--~~GKidR~~L~~~~~~ 666 (1761)
+.|++.+..|+.|..+. .|+.+++||+| +||||||++|++++..
T Consensus 503 ~~l~~~l~~~~~~~~~~----~~~~~~~lP~t~~~~GKi~r~~L~~~~~~ 548 (552)
T PRK09274 503 QELRALAAAHPHTAGIE----RFLIHPSFPVDIRHNAKIFREKLAVWAAK 548 (552)
T ss_pred hhhHHHHHhcCCCccee----EEeccCCCCccccccccccHHHHHHHHHH
Confidence 88888888886554321 13667999999 7999999999987654
|
|
| >PLN02860 o-succinylbenzoate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-61 Score=627.78 Aligned_cols=509 Identities=17% Similarity=0.176 Sum_probs=393.3
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+++. ++|+++|++ .+++++||+||+++++++|++|.+. |+++||+|+|+++|++++++++|
T Consensus 7 ~~~~~~~~~~~~-----~~p~~~a~~-----~~~~~~Ty~el~~~~~~la~~L~~~-Gv~~gd~V~v~~~n~~~~~~~~l 75 (563)
T PLN02860 7 AHICQCLTRLAT-----LRGNAVVTI-----SGNRRRTGHEFVDGVLSLAAGLLRL-GLRNGDVVAIAALNSDLYLEWLL 75 (563)
T ss_pred hHHHHHHHHHHH-----hcCCceEEe-----cCCceeeHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEcCCCHHHHHHHH
Confidence 345566665554 789999998 6778999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhc-----ccc-cccccc--------CCcc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKE-----ASN-VVDIKS--------WPTI 1308 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~-----~~~-~~~~~~--------~~~~ 1308 (1761)
||+++|++++||+|.++.+ ++.++++++++++++++........... ... .+.... +...
T Consensus 76 a~~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 149 (563)
T PLN02860 76 AVACAGGIVAPLNYRWSFE------EAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSF 149 (563)
T ss_pred HHhhccEEEEeCCcccCHH------HHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhc
Confidence 9999999999999977777 9999999999999999875422221110 000 000000 0000
Q ss_pred ccCCCCccc--hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHH
Q psy14338 1309 LDTDDMPKK--KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFA 1386 (1761)
Q Consensus 1309 ~~~~~~~~~--~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 1386 (1761)
...+..... ..........+++++||+|||||||+||||+++|++++.........+++.++|+++.+.|++|..++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~- 228 (563)
T PLN02860 150 LTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL- 228 (563)
T ss_pred cccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccH-
Confidence 000000000 00011123467899999999999999999999999999888877778899999999999999998887
Q ss_pred HHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCC
Q psy14338 1387 LWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEE 1466 (1761)
Q Consensus 1387 ~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~ 1466 (1761)
..++.++..|+++++.+. +++..+++.|+++++|+++++|+++..|++... .......+++||.+++||++
T Consensus 229 ~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-----~~~~~~~~~~lr~~~~gG~~ 299 (563)
T PLN02860 229 SSALAMLMVGACHVLLPK----FDAKAALQAIKQHNVTSMITVPAMMADLISLTR-----KSMTWKVFPSVRKILNGGGS 299 (563)
T ss_pred HHHHHHHHcCceEEecCC----CCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhh-----hhhccccccceeEEEeCCCc
Confidence 568899999999999874 799999999999999999999999999976321 11123467899999999999
Q ss_pred CChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCC-CCCCCceeEecccccccCcceecccCCCCccceecccc
Q psy14338 1467 RPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGA-SSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGK 1545 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 1545 (1761)
+++ .+.++|.+.|+. ..+++.||+||++..+.... ..++..........+.... ..........++|+
T Consensus 300 l~~-~~~~~~~~~~~~-----~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~vG~ 368 (563)
T PLN02860 300 LSS-RLLPDAKKLFPN-----AKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTK-----SSSVHQPQGVCVGK 368 (563)
T ss_pred CCH-HHHHHHHHhcCC-----CceecCCCccccCcccccccccccccccchhhhhhhcccc-----cccccccCCcccCC
Confidence 999 888888887743 57999999999764332111 1100000000000000000 00000111236899
Q ss_pred ccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCC
Q psy14338 1546 LLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAG 1625 (1761)
Q Consensus 1546 p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d 1625 (1761)
|++|++++|+|++ .|++|||+|+|++++.|||| +|+.|++.| ..+|||+|||+|++ |
T Consensus 369 p~~~~~v~i~~~~------~g~~Gel~v~g~~~~~GY~~---~~~~t~~~~--------~~~g~~~TGDl~~~------d 425 (563)
T PLN02860 369 PAPHVELKIGLDE------SSRVGRILTRGPHVMLGYWG---QNSETASVL--------SNDGWLDTGDIGWI------D 425 (563)
T ss_pred ccCCcEEEEecCC------CCceeEEEEecCcccccccC---Cccccchhc--------cCCCeEEccceEEE------c
Confidence 9999999999854 68899999999999999999 999999988 45799999999999 9
Q ss_pred CCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC----
Q psy14338 1626 VAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN---- 1696 (1761)
Q Consensus 1626 ~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~---- 1696 (1761)
+| |+ ++|+||+||+||++|+||+|.|||+ ++.+||+|.+|+|++. ++.++++|+....
T Consensus 426 ~d--------G~----l~~~GR~~d~i~~~G~~v~p~eIE~-~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~ 492 (563)
T PLN02860 426 KA--------GN----LWLIGRSNDRIKTGGENVYPEEVEA-VLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWS 492 (563)
T ss_pred CC--------CC----EEEeecccceeEECCEEccHHHHHH-HHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccc
Confidence 99 99 9999999999999999999999999 8999999999999974 4578888886432
Q ss_pred -----------chhHhhHHHHHHHHHhhhcCceeeEEEEE-CCCCccCCCchhhhHHHHHHHHH
Q psy14338 1697 -----------ESEALDLVPLVTNAVLEEHHLIVGVAVVV-DPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1697 -----------~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v-~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
..+.++++++++++.|+ .||+|+.|+++ + +||+|++||++|++|++++.
T Consensus 493 ~~~~~~~~~~~~~~~~~l~~~~~~~~L~-~~~~P~~~~~~~~--~lP~t~~GKi~r~~L~~~~~ 553 (563)
T PLN02860 493 DNEKENAKKNLTLSSETLRHHCREKNLS-RFKIPKLFVQWRK--PFPLTTTGKIRRDEVRREVL 553 (563)
T ss_pred cccchhhcccccccHHHHHHHHhhCccc-ccccceEEEEEec--CCCCCcccchhHHHHHHHHH
Confidence 24557899999873388 99999998775 6 79999999999999999874
|
|
| >PTZ00237 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-61 Score=632.34 Aligned_cols=492 Identities=14% Similarity=0.134 Sum_probs=378.7
Q ss_pred CCCCCceEEccCCC-CceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1181 APVPPGVSSVDTRS-AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1181 ~P~~~Av~~~d~~~-~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
+|+++|+++..... ..+++||+||.++++++|+.|++. |+++||+|+++++|++++++++|||+++|++++|+++.++
T Consensus 74 ~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~ 152 (647)
T PTZ00237 74 KRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNL-NISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYS 152 (647)
T ss_pred CCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCC
Confidence 59999998643222 257899999999999999999999 9999999999999999999999999999999999988776
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechh---------HHHHHhhhcc------ccccccccCC-----cc------ccCCC
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQN---------VIKLLKSKEA------SNVVDIKSWP-----TI------LDTDD 1313 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~---------~~~~~~~~~~------~~~~~~~~~~-----~~------~~~~~ 1313 (1761)
.+ ++.+++++++++++|+++. ..+.+..... ..++...... .. .....
T Consensus 153 ~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 226 (647)
T PTZ00237 153 VK------SLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPN 226 (647)
T ss_pred HH------HHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcc
Confidence 66 9999999999999999752 1111111100 0011000000 00 00000
Q ss_pred -Cc-----------cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHH-HHHHHHHHHHHcCcCCCCeEEEEeCCc
Q psy14338 1314 -MP-----------KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAA-VTSLCRSMKLACELYPSRHIALCLDPY 1380 (1761)
Q Consensus 1314 -~~-----------~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~-l~~~~~~~~~~~~~~~~d~~~~~~~~~ 1380 (1761)
.. ............+++++||+|||||||+||||+++|++ +.+........+....+++++...++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 306 (647)
T PTZ00237 227 TLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIG 306 (647)
T ss_pred cccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCc
Confidence 00 00000011235678999999999999999999999998 555444445566777777777777777
Q ss_pred cChhHHHHHHHHhhcCceEEEeCCCcc--ccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcce
Q psy14338 1381 CGLGFALWVLSSVYSGHHSILIPPSEV--EVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVR 1458 (1761)
Q Consensus 1381 ~~~~~~~~~~~~L~~G~~~vl~~~~~~--~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr 1458 (1761)
|..+. ..++.+|+.|+++++.+.... .+.+..+++.|++++||+++++|++++.|++..... .......++++||
T Consensus 307 w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~--~~~~~~~~l~~Lr 383 (647)
T PTZ00237 307 WVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEA--TIIRSKYDLSNLK 383 (647)
T ss_pred eEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccc--cccccccCcchhe
Confidence 66544 458899999999999874211 122789999999999999999999999997631100 0001345789999
Q ss_pred EEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCcc
Q psy14338 1459 TCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSL 1538 (1761)
Q Consensus 1459 ~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1538 (1761)
.+++||+++++ .+.+++.+.+. ..+.+.||+||++......+.. ...
T Consensus 384 ~i~~~G~~l~~-~~~~~~~~~~g------~~i~~~yG~TE~~~~~~~~~~~--------------------------~~~ 430 (647)
T PTZ00237 384 EIWCGGEVIEE-SIPEYIENKLK------IKSSRGYGQTEIGITYLYCYGH--------------------------INI 430 (647)
T ss_pred EEEecCccCCH-HHHHHHHHhcC------CCEEeeechHHhChhhhccCCC--------------------------CCC
Confidence 99999999999 78888877653 5789999999986543221110 001
Q ss_pred ceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCC---cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCce
Q psy14338 1539 CLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSP---HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYL 1615 (1761)
Q Consensus 1539 ~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~---~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDl 1615 (1761)
..+++|+|++|++++|+|+ +++++|.|+.|||+|+|| +++.|||| +|+.|.+.|. ..+|||+|||+
T Consensus 431 ~~~s~G~p~~g~~~~i~d~-~g~~~~~ge~GEl~v~~p~~p~~~~gy~~---~~~~~~~~f~-------~~~g~~~TGDl 499 (647)
T PTZ00237 431 PYNATGVPSIFIKPSILSE-DGKELNVNEIGEVAFKLPMPPSFATTFYK---NDEKFKQLFS-------KFPGYYNSGDL 499 (647)
T ss_pred CCCCCccCcCCceEEEECC-CCCCCCCCCceEEEEeccCCchhhCceeC---CHHHHHHHHh-------CCCCEEECCcE
Confidence 1245999999999999996 489999999999999986 88999999 9999998883 23689999999
Q ss_pred eEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEE
Q psy14338 1616 GFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVV 1690 (1761)
Q Consensus 1616 g~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~ 1690 (1761)
|++ |+| |+ ++|+||+||+||++|+||+|.|||+ +|.+||.|.+|+|++. ++.+++|
T Consensus 500 g~~------d~d--------G~----l~i~GR~dd~i~~~G~rI~p~eIE~-~l~~~p~V~eaavvg~~~~~~g~~~~a~ 560 (647)
T PTZ00237 500 GFK------DEN--------GY----YTIVSRSDDQIKISGNKVQLNTIET-SILKHPLVLECCSIGIYDPDCYNVPIGL 560 (647)
T ss_pred EEE------CCC--------Ce----EEEEeccCCEEEECCEEeCHHHHHH-HHHhCCCceeeEEEeeEcCCCCCEEEEE
Confidence 999 999 99 9999999999999999999999999 8999999999999985 4578888
Q ss_pred EEeCCC----chh----HhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1691 VELDGN----ESE----ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1691 v~~~~~----~~~----~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
|++... ..+ .++|+++++++ |+ .|++|+.|++++ +||+|+||||+|+.|++.+.+
T Consensus 561 Vv~~~~~~~~~~~~~~l~~~i~~~~~~~-l~-~~~~P~~i~~v~--~lP~T~sGKi~R~~Lr~~~~~ 623 (647)
T PTZ00237 561 LVLKQDQSNQSIDLNKLKNEINNIITQD-IE-SLAVLRKIIIVN--QLPKTKTGKIPRQIISKFLND 623 (647)
T ss_pred EEeccCccccCCCHHHHHHHHHHHHHhh-cC-ccccCcEEEEcC--CCCCCCCccEeHHHHHHHHcC
Confidence 887521 112 25677888886 88 999999999999 999999999999999999743
|
|
| >PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-61 Score=616.99 Aligned_cols=478 Identities=19% Similarity=0.237 Sum_probs=404.7
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++++.|++++.++||++|+.+.+ +.+||+||.++++++|+.|. +.|+++|++|+++++++ .++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~--------~~g~~~~~~v~i~~~~~--~~~ 65 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEE------KKVTFMELHEAVVSVAGKLA--------ALGVKKGDRVALLMKNG--MEM 65 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCC------eeeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHH
Confidence 478999999999999999998765 68999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccC
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAK 240 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1761)
++++|||+++|++++|+++.++.+ ++.+++++++++++|+++.....+..... ... .+....
T Consensus 66 ~~~~la~~~~G~~~v~i~~~~~~~-----~~~~~~~~~~~~~vi~~~~~~~~~~~~~~---~~~----------~~~~~~ 127 (483)
T PRK03640 66 ILVIHALQQLGAVAVLLNTRLSRE-----ELLWQLDDAEVKCLITDDDFEAKLIPGIS---VKF----------AELMNG 127 (483)
T ss_pred HHHHHHHHhCCcEEEecCcCCCHH-----HHHHHHHhCCCCEEEEcchhhHHHhhhcc---ccH----------HHHhhc
Confidence 999999999999999999999876 89999999999999998765433221100 000 000000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhc
Q psy14338 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLN 320 (1761)
Q Consensus 241 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~ 320 (1761)
............++++++++|||||||.||||+++|+++...+......++++++|++++.+|++|..++.. ++.+|..
T Consensus 128 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~ 206 (483)
T PRK03640 128 PKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSI-LMRSVIY 206 (483)
T ss_pred ccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHH-HHHHHhc
Confidence 001111223346789999999999999999999999999988887777889999999999999999999885 8999999
Q ss_pred CcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHh
Q psy14338 321 GMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVF 400 (1761)
Q Consensus 321 G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~ 400 (1761)
|+++++.+ ..++..+++.++++++|++.++| +++..++...... ....+||.+++| |+++++.+++.|.+.
T Consensus 207 G~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~P-~~~~~l~~~~~~~-~~~~~lr~~~~~--g~~~~~~~~~~~~~~- 277 (483)
T PRK03640 207 GMRVVLVE----KFDAEKINKLLQTGGVTIISVVS-TMLQRLLERLGEG-TYPSSFRCMLLG--GGPAPKPLLEQCKEK- 277 (483)
T ss_pred CCEEEecC----CCCHHHHHHHHHHhCCcEEEeHH-HHHHHHHhCcCcc-ccCCcceEEEEc--CCCCCHHHHHHHHHh-
Confidence 99999988 67899999999999999999996 4777776543221 234689999999 999999999988764
Q ss_pred hhCCCCCCccccccccccccceE-eecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe
Q psy14338 401 QSKGLRPDAICPCASSSECLTVS-VRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK 479 (1761)
Q Consensus 401 ~~~g~~~~~l~n~YG~TE~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d 479 (1761)
|++ +++.||+||++... ...+.. .....+++|+|+++++++|+|
T Consensus 278 ---~~~---~~~~YG~tE~~~~~~~~~~~~-----------------------------~~~~~~~vG~p~~~~~~~i~~ 322 (483)
T PRK03640 278 ---GIP---VYQSYGMTETASQIVTLSPED-----------------------------ALTKLGSAGKPLFPCELKIEK 322 (483)
T ss_pred ---CCC---eeeeeccCcccccccccCccc-----------------------------ccccCCCcccccCCcEEEEec
Confidence 554 99999999986432 221110 012357899999999999998
Q ss_pred CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeE
Q psy14338 480 MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLM 559 (1761)
Q Consensus 480 ~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 559 (1761)
+. + ++|.|..|||+|+|++++.||+++|+.|+++|. ++||+|||+|++++||.++|+||+||+|
T Consensus 323 ~~-~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~-------------~~~~~tGDl~~~~~~g~l~~~GR~~~~i 386 (483)
T PRK03640 323 DG-V--VVPPFEEGEIVVKGPNVTKGYLNREDATRETFQ-------------DGWFKTGDIGYLDEEGFLYVLDRRSDLI 386 (483)
T ss_pred CC-C--cCCCCCceEEEEECcchhhhhcCCHHHHHHHHh-------------cCCeeccceEEEcCCCCEEEeecccCeE
Confidence 64 4 699999999999999999999999999999984 7899999999999999999999999999
Q ss_pred EECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeE
Q psy14338 560 TVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYC 638 (1761)
Q Consensus 560 ki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~ 638 (1761)
|++|++|++.|||+.+.+++.+ .+++|++.++. .++.++++++.....+.+++++++++.|+.|++|..+
T Consensus 387 ~~~G~~v~~~~ie~~i~~~~~v-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i---- 457 (483)
T PRK03640 387 ISGGENIYPAEIEEVLLSHPGV-----AEAGVVGVPDDKWGQVPVAFVVKSGEVTEEELRHFCEEKLAKYKVPKRF---- 457 (483)
T ss_pred EeCCEEECHHHHHHHHHhCCCe-----eEEEEEeCCCcccCCceEEEEEeCCCCCHHHHHHHHHHhccCCCCCcEE----
Confidence 9999999999999999998887 78888888743 4677888888887888999999999999999999986
Q ss_pred EEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 639 LALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 639 v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+.++++|+|++||++|++|++.+.
T Consensus 458 ---~~~~~iP~t~~gK~~r~~l~~~~~ 481 (483)
T PRK03640 458 ---YFVEELPRNASGKLLRHELKQLVE 481 (483)
T ss_pred ---EEeCCCCCCCccceeHHHHHHHHh
Confidence 556999999999999999999875
|
|
| >TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-60 Score=632.68 Aligned_cols=498 Identities=14% Similarity=0.144 Sum_probs=392.4
Q ss_pred CCCCCCCceEEccC-CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1179 AGAPVPPGVSSVDT-RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~-~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
+++|+++|+++.+. .+..+.+||+||.++++++|+.|++. |+++||+|+++++|++++++++|||+++|++++|++|.
T Consensus 68 ~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~ 146 (625)
T TIGR02188 68 EARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSL-GVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGG 146 (625)
T ss_pred ccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCC
Confidence 46799999986443 23457899999999999999999998 99999999999999999999999999999999999998
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHH---------HHHhhhcc------ccccccccCC-c--cccCCCC-----
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI---------KLLKSKEA------SNVVDIKSWP-T--ILDTDDM----- 1314 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~---------~~~~~~~~------~~~~~~~~~~-~--~~~~~~~----- 1314 (1761)
++.+ ++.+++++++++++|+++... ..+..... ..++...... . .......
T Consensus 147 ~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (625)
T TIGR02188 147 FSAE------ALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDVWWHDL 220 (625)
T ss_pred CCHH------HHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccccHHHH
Confidence 7777 999999999999999986421 11111100 0001000000 0 0000000
Q ss_pred -ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHH-HHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1315 -PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLC-RSMKLACELYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1315 -~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
.............+++++||+|||||||+||||+++|++++... ......+++.++|+++...++.|..+..+.++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 300 (625)
T TIGR02188 221 MAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGP 300 (625)
T ss_pred HhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHH
Confidence 00000111223567899999999999999999999999986544 3445567888989888888888887776678999
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHL 1472 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l 1472 (1761)
|++|+++++.+......++..+++.|+++++|+++++|++++.|.+... ......++++||.+++||+++++ ++
T Consensus 301 l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-----~~~~~~~l~~lr~i~~~G~~l~~-~~ 374 (625)
T TIGR02188 301 LANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGD-----EWVKKHDLSSLRLLGSVGEPINP-EA 374 (625)
T ss_pred HHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCC-----cccccCCccceeEEEEecCCCCH-HH
Confidence 9999999998643334689999999999999999999999999976321 11234568899999999999999 77
Q ss_pred HHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEE
Q psy14338 1473 TSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKV 1552 (1761)
Q Consensus 1473 ~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 1552 (1761)
.+++.+.+ |...+.+++.||+||++..++...... ...+.+++|+|++|+++
T Consensus 375 ~~~~~~~~---~~~~~~i~~~yG~TE~~~~~~~~~~~~-------------------------~~~~~~~~G~p~~g~~~ 426 (625)
T TIGR02188 375 WMWYYKVV---GKERCPIVDTWWQTETGGIMITPLPGA-------------------------TPTKPGSATLPFFGIEP 426 (625)
T ss_pred HHHHHHHc---CCCCCceEecccccccCCceeecCCCC-------------------------CCcCCCcccCCcCCceE
Confidence 77777665 333468999999999876543322110 00112459999999999
Q ss_pred EEEcCCCCCCCC-CCcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1553 IIANPETKGQCG-DSHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1553 ~v~d~~~~~~~p-~G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
+|+|+ ++++++ .|+.|||+|+| |++++|||| +|+.+.+.|.. ..+|||+|||+|++ |+|
T Consensus 427 ~i~d~-~g~~~~~~g~~GeL~v~~p~p~~~~gy~~---~~~~~~~~~~~------~~~g~~~TGDl~~~------d~d-- 488 (625)
T TIGR02188 427 AVVDE-EGNPVEGPGEGGYLVIKQPWPGMLRTIYG---DHERFVDTYFS------PFPGYYFTGDGARR------DKD-- 488 (625)
T ss_pred EEECC-CCCCCCCCCCeEEEEEccCCCcccccccC---ChHHHHHHHhc------cCCCEEECCceEEE------cCC--
Confidence 99994 589999 99999999999 689999999 99988887732 24679999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc----hhH
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE----SEA 1700 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~----~~~ 1700 (1761)
|+ ++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|++.... ...
T Consensus 489 ------G~----l~i~GR~dd~i~~~G~ri~p~eIE~-~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~ 557 (625)
T TIGR02188 489 ------GY----IWITGRVDDVINVSGHRLGTAEIES-ALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELR 557 (625)
T ss_pred ------Cc----EEEEecccCEEEeCCEEECHHHHHH-HHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHH
Confidence 99 9999999999999999999999999 8999999999999974 45788888875322 124
Q ss_pred hhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1701 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1701 ~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
++|+++|+++ |+ .|++|+.|++++ +||+|+|||++|+.|++.+.+.
T Consensus 558 ~~l~~~~~~~-l~-~~~~P~~i~~v~--~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 558 KELRKHVRKE-IG-PIAKPDKIRFVP--GLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred HHHHHHHHhh-cC-CCccCcEEEECC--CCCCCCCccchHHHHHHHHcCC
Confidence 6899999987 88 899999999999 9999999999999999987543
|
This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501. |
| >PRK07788 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-61 Score=630.00 Aligned_cols=483 Identities=15% Similarity=0.150 Sum_probs=392.1
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++++.|.+++. ++||++|++ ++++++||+||.++++++|++|.+. |+++||+|+++++|++++++++||
T Consensus 50 ~~~~~~~~~a~-----~~pd~~Al~-----~~~~~~Ty~el~~~~~~la~~L~~~-gi~~gd~V~i~~~n~~~~~~~~la 118 (549)
T PRK07788 50 PFAGLVAHAAR-----RAPDRAALI-----DERGTLTYAELDEQSNALARGLLAL-GVRAGDGVAVLARNHRGFVLALYA 118 (549)
T ss_pred hHHHHHHHHHH-----HCCCceEEE-----ECCCceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHH
Confidence 45666665554 779999999 6778999999999999999999999 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----cccccccCC------ccccCCC
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----NVVDIKSWP------TILDTDD 1313 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~ 1313 (1761)
|+++|+++||++|.+|.+ ++.+++++++++++|++.+....+...... ..+...... ......+
T Consensus 119 ~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (549)
T PRK07788 119 AGKVGARIILLNTGFSGP------QLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDD 192 (549)
T ss_pred HHhcCCEEEEeCCCCCHH------HHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHH
Confidence 999999999999988777 999999999999999998776655432110 000000000 0000000
Q ss_pred CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHh
Q psy14338 1314 MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSV 1393 (1761)
Q Consensus 1314 ~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L 1393 (1761)
.... ......+..+++.+|++|||||||+||||+++|+++.+.+......+++.++++++...|++|..++ ..++.++
T Consensus 193 ~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~-~~~~~~l 270 (549)
T PRK07788 193 LIAG-SSTAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGW-AHLTLAM 270 (549)
T ss_pred HhcC-CCCCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHH-HHHHHHH
Confidence 0000 0001112345688999999999999999999999999998888888999999999888888888777 4577889
Q ss_pred hcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHH
Q psy14338 1394 YSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473 (1761)
Q Consensus 1394 ~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~ 1473 (1761)
..|+++++.+ .+++..+++.++++++|+++++|+++..+++.... .....++++||.+++||+++++ .+.
T Consensus 271 ~~G~~~v~~~----~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-----~~~~~~~~~lr~i~~gG~~l~~-~~~ 340 (549)
T PRK07788 271 ALGSTVVLRR----RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPE-----VLAKYDTSSLKIIFVSGSALSP-ELA 340 (549)
T ss_pred HhCCEEEECC----CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCccc-----ccCCCCCCceeEEEEeCCCCCH-HHH
Confidence 9999999885 37999999999999999999999999999763211 1134568899999999999999 888
Q ss_pred HHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEE
Q psy14338 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVI 1553 (1761)
Q Consensus 1474 ~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 1553 (1761)
+++.+.++ ..+++.||+||++..+..... .. .....++|+|++|++++
T Consensus 341 ~~~~~~~~------~~l~~~YG~TE~~~~~~~~~~------------~~--------------~~~~~~vG~~~~~~~~~ 388 (549)
T PRK07788 341 TRALEAFG------PVLYNLYGSTEVAFATIATPE------------DL--------------AEAPGTVGRPPKGVTVK 388 (549)
T ss_pred HHHHHHhC------ccceeccCcchhchhhccChh------------hh--------------hhcCCCcccCCCCcEEE
Confidence 88887764 469999999997654321110 00 00123599999999999
Q ss_pred EEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCC
Q psy14338 1554 IANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633 (1761)
Q Consensus 1554 v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~ 1633 (1761)
|+|++ ++++|.|++|||+|+|++++.||++ +++. . + .+|||+|||+|++ |+|
T Consensus 389 i~d~~-~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~--~-~---------~~g~~~TGDl~~~------~~~------ 440 (549)
T PRK07788 389 ILDEN-GNEVPRGVVGRIFVGNGFPFEGYTD---GRDK--Q-I---------IDGLLSSGDVGYF------DED------ 440 (549)
T ss_pred EECCC-cCCCCCCCeEEEEEeCCCccccccC---CCcc--c-c---------cCCceecCceEEE------cCC------
Confidence 99965 8999999999999999999999998 7654 1 1 3689999999999 999
Q ss_pred CCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHH
Q psy14338 1634 GVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLV 1707 (1761)
Q Consensus 1634 g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l 1707 (1761)
|+ ++|+||+||+||++|+||+|.|||+ ++.+||+|.+|+|++. ++.++++|+.. +...+.+++++++
T Consensus 441 --g~----l~~~GR~dd~i~~~G~~v~p~eIE~-~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~ 513 (549)
T PRK07788 441 --GL----LFVDGRDDDMIVSGGENVFPAEVED-LLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIKDYV 513 (549)
T ss_pred --CC----EEEeccCcceEEECCEEECHHHHHH-HHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 45788888874 3456778999999
Q ss_pred HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHH
Q psy14338 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 1746 (1761)
Q Consensus 1708 ~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~ 1746 (1761)
+++ |+ .||+|..|++++ +||+|++||++|++|+++
T Consensus 514 ~~~-l~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 514 RDN-LA-RYKVPRDVVFLD--ELPRNPTGKVLKRELREM 548 (549)
T ss_pred HHh-hh-cCCCCcEEEEeC--CCCCCCCcCEeHHHhhcc
Confidence 997 88 999999999999 999999999999999753
|
|
| >PRK07638 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-60 Score=612.19 Aligned_cols=480 Identities=15% Similarity=0.204 Sum_probs=400.2
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
++.++|+++++++|+++|+.+.+ +.+||+||.++++++|+.|. +.|. +|++|+|+++|+ ++++
T Consensus 2 ~~~~~~~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~--------~~~~-~~~~v~i~~~~~--~~~~ 64 (487)
T PRK07638 2 GITKEYKKHASLQPNKIAIKEND------RVLTYKDWFESVCKVANWLN--------EKES-KNKTIAILLENR--IEFL 64 (487)
T ss_pred ChHHHHHHHHHhCCCCeEEecCC------cEeeHHHHHHHHHHHHHHHH--------HhCC-CCCEEEEEcCCC--HHHH
Confidence 57889999999999999998754 58999999999999999999 7774 899999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCC
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKT 241 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (1761)
+++|||+++|++++|++|.++.+ ++.++++.++++++|++......+.... ..++....+. +.....
T Consensus 65 ~~~la~~~~G~~~v~l~~~~~~~-----~~~~~~~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~ 131 (487)
T PRK07638 65 QLFAGAAMAGWTCVPLDIKWKQD-----ELKERLAISNADMIVTERYKLNDLPDEE-GRVIEIDEWK-------RMIEKY 131 (487)
T ss_pred HHHHHHHHcCeEEEecCccCCHH-----HHHHHHHhCCCCEEEEecccccchhhcc-ceEEEehhhh-------hhhhhc
Confidence 99999999999999999999876 8999999999999999986544433211 1111111110 000010
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcC
Q psy14338 242 PKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNG 321 (1761)
Q Consensus 242 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G 321 (1761)
... ........++++||+|||||||+||||+++|+++...+......+++.++|+++...|++|+.++. .++.+|..|
T Consensus 132 ~~~-~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~-~~~~~l~~g 209 (487)
T PRK07638 132 LPT-YAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLY-GAISTLYVG 209 (487)
T ss_pred ccc-ccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHH-HHHHHHccC
Confidence 100 111122356789999999999999999999999999988888889999999999999999999887 499999999
Q ss_pred cEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhh
Q psy14338 322 MHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQ 401 (1761)
Q Consensus 322 ~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~ 401 (1761)
+++++.+ .+++..+++.|+++++|++..+|+ ++..+..... . ..+.+.+++| |++++.+..++|.+.++
T Consensus 210 ~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~---~-~~~~~~~~~~--G~~l~~~~~~~~~~~~~ 278 (487)
T PRK07638 210 QTVHLMR----KFIPNQVLDKLETENISVMYTVPT-MLESLYKENR---V-IENKMKIISS--GAKWEAEAKEKIKNIFP 278 (487)
T ss_pred cEEEEcC----CCCHHHHHHHHHHcCCeEEEeCcH-HHHHHHhCcC---c-CCceeEEEEc--CCCCCHHHHHHHHHHcC
Confidence 9999987 689999999999999999999975 7777776522 2 3445556777 78899999999999885
Q ss_pred hCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCC
Q psy14338 402 SKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMD 481 (1761)
Q Consensus 402 ~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~ 481 (1761)
. . .++|.||+||++.++...... ......++|+|++|++++|+|++
T Consensus 279 ~--~---~~~~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~~G~~~~~~~~~i~d~~ 324 (487)
T PRK07638 279 Y--A---KLYEFYGASELSFVTALVDEE-----------------------------SERRPNSVGRPFHNVQVRICNEA 324 (487)
T ss_pred C--C---eEEEEecCCccCceEEecccc-----------------------------cCCCCCCCCcccCCcEEEEECCC
Confidence 3 2 499999999998766543211 01245689999999999999999
Q ss_pred CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE
Q psy14338 482 SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV 561 (1761)
Q Consensus 482 ~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki 561 (1761)
+. ++|.|+.|||+|+|+.++.||+++++.|.+.+. ++||+|||+|++|+||+++|+||+||+||+
T Consensus 325 g~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~ 389 (487)
T PRK07638 325 GE--EVQKGEIGTVYVKSPQFFMGYIIGGVLARELNA-------------DGWMTVRDVGYEDEEGFIYIVGREKNMILF 389 (487)
T ss_pred CC--CCCCCCCeEEEEecccceeeecCCHHHHhhhcc-------------CCcEecCccEeEcCCCeEEEEecCCCeEEe
Confidence 87 589999999999999999999999998876542 789999999999999999999999999999
Q ss_pred CCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEE
Q psy14338 562 TGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLA 640 (1761)
Q Consensus 562 ~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~ 640 (1761)
+|++|+|.|||+.+.+++.| .+++|++.++. .++.++++++. ..+.++++++|++.|+.|++|..+
T Consensus 390 ~G~~v~~~eiE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~v~~--~~~~~~l~~~~~~~l~~~~~p~~i------ 456 (487)
T PRK07638 390 GGINIFPEEIESVLHEHPAV-----DEIVVIGVPDSYWGEKPVAIIKG--SATKQQLKSFCLQRLSSFKIPKEW------ 456 (487)
T ss_pred CCEEECHHHHHHHHHhCCCe-----eeEEEEecCchhcCCeeEEEEEC--CCCHHHHHHHHHHHhhcccCCcEE------
Confidence 99999999999999998888 79999998754 56788888875 467889999999999999999986
Q ss_pred EeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 641 LVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 641 ~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
+.++++|+|++||++|++|++.+.+.
T Consensus 457 -~~v~~iP~t~~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 457 -HFVDEIPYTNSGKIARMEAKSWIENQ 482 (487)
T ss_pred -EEecccCCCCcccccHHHHHHHHhcc
Confidence 45699999999999999999987653
|
|
| >PRK06145 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-60 Score=613.94 Aligned_cols=491 Identities=17% Similarity=0.225 Sum_probs=409.8
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
++.++|+++++++|+++|+.+.+ +.+||.||.++++++|.+|. +.|+++|++|+++++|+ ++++
T Consensus 3 ~~~~~~~~~~~~~~~~~a~~~~~------~~~ty~el~~~v~~~a~~L~--------~~g~~~~~~v~i~~~~~--~~~~ 66 (497)
T PRK06145 3 NLSASIAFHARRTPDRAALVYRD------QEISYAEFHQRILQAAGMLH--------ARGIGQGDVVALLMKNS--AAFL 66 (497)
T ss_pred cHHHHHHHHHHHCCCceEEEECC------cceeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHHH
Confidence 57899999999999999998754 58999999999999999999 88999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCC
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKT 241 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (1761)
+++|||+++|++++|+++.++.+ ++.+++++++++++++++......... ...+..+......+ ..+...
T Consensus 67 ~~~la~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~ 136 (497)
T PRK06145 67 ELAFAASYLGAVFLPINYRLAAD-----EVAYILGDAGAKLLLVDEEFDAIVALE--TPKIVIDAAAQADS---RRLAQG 136 (497)
T ss_pred HHHHHHHhcCcEEEecccccCHH-----HHHHHHHhcCCcEEEEccchhhhhhcc--cceEEecCcccchh---HHHhcc
Confidence 99999999999999999999876 899999999999999987654322110 01111110000000 000000
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcC
Q psy14338 242 PKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNG 321 (1761)
Q Consensus 242 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G 321 (1761)
...........++++++++|||||||.||||+++|+++...+......+++..+++++...|++|..++....+.+++.|
T Consensus 137 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g 216 (497)
T PRK06145 137 GLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVG 216 (497)
T ss_pred CCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhcc
Confidence 00111122356789999999999999999999999999887777777889999999999999999988865568899999
Q ss_pred cEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhh
Q psy14338 322 MHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQ 401 (1761)
Q Consensus 322 ~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~ 401 (1761)
+++++.+ .+++..+++.++++++|++.++| +++..++........+++++|.+++| |++++..+++.|.+.++
T Consensus 217 ~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~ll~~~~~~~~~~~~l~~~~~g--G~~~~~~~~~~~~~~~~ 289 (497)
T PRK06145 217 GTLRIHR----EFDPEAVLAAIERHRLTCAWMAP-VMLSRVLTVPDRDRFDLDSLAWCIGG--GEKTPESRIRDFTRVFT 289 (497)
T ss_pred CEEEECC----cCCHHHHHHHHHHhCCeEEEehH-HHHHHHHcCCCccccccccceEEEec--CCCCCHHHHHHHHHHcC
Confidence 9999987 67999999999999999999996 47777776655555667899999999 99999999999999874
Q ss_pred hCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCC
Q psy14338 402 SKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMD 481 (1761)
Q Consensus 402 ~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~ 481 (1761)
.. .++|.||+||++..++..... ......+++|+|+++++++|+|++
T Consensus 290 ~~-----~v~~~YG~tE~~~~~~~~~~~----------------------------~~~~~~~~~G~~~~~~~~~i~~~~ 336 (497)
T PRK06145 290 RA-----RYIDAYGLTETCSGDTLMEAG----------------------------REIEKIGSTGRALAHVEIRIADGA 336 (497)
T ss_pred CC-----ceEEeecCcccCCcceeccCc----------------------------cccccCCCcccCCCCceEEEECCC
Confidence 32 499999999998655432210 001134579999999999999998
Q ss_pred CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE
Q psy14338 482 SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV 561 (1761)
Q Consensus 482 ~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki 561 (1761)
+. .+|.|+.|||+|+|++++.||+++++.|++.|. ++||+|||+|++++||+++|+||+||+||+
T Consensus 337 ~~--~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~-------------~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~ 401 (497)
T PRK06145 337 GR--WLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFY-------------GDWFRSGDVGYLDEEGFLYLTDRKKDMIIS 401 (497)
T ss_pred CC--CCCCCCceEEEEECcchhhhhcCChHHHHHHHh-------------CCCeeccceEEEcCCCcEEEeccccceEEe
Confidence 86 589999999999999999999999999999995 789999999999999999999999999999
Q ss_pred CCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcceeeeeE
Q psy14338 562 TGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQVGLYC 638 (1761)
Q Consensus 562 ~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~ 638 (1761)
+|++|+|.|||+.|.+++++ .+++|++.++. .++.+++++++... .+.++++++++++|+.|++|..+
T Consensus 402 ~G~~v~~~~IE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i---- 472 (497)
T PRK06145 402 GGENIASSEVERVIYELPEV-----AEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQRLASFKVPRQL---- 472 (497)
T ss_pred CCeEECHHHHHHHHHhCCCe-----eEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCCEE----
Confidence 99999999999999999888 68999988754 57789999987653 56789999999999999999986
Q ss_pred EEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 639 LALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 639 v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+.+++||+|++||++|++|++++.
T Consensus 473 ---~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 473 ---KVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred ---EEeccCCCCCcccccHHHHHHHhc
Confidence 556999999999999999998653
|
|
| >PRK07529 AMP-binding domain protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=630.13 Aligned_cols=503 Identities=17% Similarity=0.210 Sum_probs=397.2
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccC---CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDT---RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLI 1238 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~---~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~i 1238 (1761)
+.++++.|.+.+. ++|+++|+.+... ....+++||+||.++++++|+.|++. |+++||+|+++++|+++++
T Consensus 24 ~~t~~~~l~~~a~-----~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~-Gi~~gd~V~i~~~n~~e~~ 97 (632)
T PRK07529 24 PASTYELLSRAAA-----RHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSL-GVGPGDVVAFLLPNLPETH 97 (632)
T ss_pred CCCHHHHHHHHHH-----HCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHH
Confidence 3456666666654 7899999986422 12467999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH-----HHHHhhh----ccc-cccccccCC--
Q psy14338 1239 CAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV-----IKLLKSK----EAS-NVVDIKSWP-- 1306 (1761)
Q Consensus 1239 va~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~-----~~~~~~~----~~~-~~~~~~~~~-- 1306 (1761)
+++|||+++| +++||+|.++.+ ++.+++++++++++|++... ...+... ... .++......
T Consensus 98 ~~~lA~~~~G-i~~pi~~~~~~~------~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 170 (632)
T PRK07529 98 FALWGGEAAG-IANPINPLLEPE------QIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYL 170 (632)
T ss_pred HHHHHHHHhC-EEEeCCCcCCHH------HHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcccc
Confidence 9999999999 579998877666 99999999999999997532 1222111 000 000000000
Q ss_pred -----------------ccccCCC-Cccch--hhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC
Q psy14338 1307 -----------------TILDTDD-MPKKK--LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE 1366 (1761)
Q Consensus 1307 -----------------~~~~~~~-~~~~~--~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~ 1366 (1761)
....... ..... .........++++++++|||||||.||||+++|+++.+.+......++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~ 250 (632)
T PRK07529 171 PGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLG 250 (632)
T ss_pred cccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcC
Confidence 0000000 00000 000112346789999999999999999999999999999888888888
Q ss_pred cCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccc--cCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCc
Q psy14338 1367 LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE--VNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSI 1444 (1761)
Q Consensus 1367 ~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~--~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~ 1444 (1761)
+.++++++..+|++|.++....++.+|..|+++++.++..+. .....+++.|+++++|++.++|+++..|++.
T Consensus 251 ~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~----- 325 (632)
T PRK07529 251 LGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQV----- 325 (632)
T ss_pred CCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhC-----
Confidence 999999999999999988877889999999999998753221 1136789999999999999999999999763
Q ss_pred chhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEeccccccc
Q psy14338 1445 PQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRN 1524 (1761)
Q Consensus 1445 ~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~ 1524 (1761)
.....++++||.+++||+++++ .+.+++.+.++ ..+++.||+||++.++......
T Consensus 326 ---~~~~~~~~slr~v~~gg~~l~~-~l~~~~~~~~g------~~l~~~YG~TE~~~~~~~~~~~--------------- 380 (632)
T PRK07529 326 ---PVDGHDISSLRYALCGAAPLPV-EVFRRFEAATG------VRIVEGYGLTEATCVSSVNPPD--------------- 380 (632)
T ss_pred ---cccCCCccceEEEEEcCCCCCH-HHHHHHHHHhC------CcEeeeecccccCcccccCCcc---------------
Confidence 1233578899999999999999 88888887763 5799999999987654322110
Q ss_pred CcceecccCCCCccceeccccccCCcEEEEE--cCCCC---CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhh
Q psy14338 1525 DRVSLVERGSPHSLCLLESGKLLPGVKVIIA--NPETK---GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSAR 1599 (1761)
Q Consensus 1525 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~--d~~~~---~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~ 1599 (1761)
...+.+++|+|+++++++|+ |++ + ++||.|+.|||+|+|++++.||+| ++ .+.+.|.
T Consensus 381 -----------~~~~~~svG~~~p~~~v~i~~~d~~-g~~~~~~~~g~~Gel~v~gp~v~~GY~~---~~-~~~~~~~-- 442 (632)
T PRK07529 381 -----------GERRIGSVGLRLPYQRVRVVILDDA-GRYLRDCAVDEVGVLCIAGPNVFSGYLE---AA-HNKGLWL-- 442 (632)
T ss_pred -----------ccccCCCcccccCCceEEEEEcCCC-CcccccCCCCCceEEEEECCCccccccC---Cc-ccccccc--
Confidence 00123469999999999885 544 5 789999999999999999999996 54 4566662
Q ss_pred cccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeE
Q psy14338 1600 LVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECA 1679 (1761)
Q Consensus 1600 p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~ 1679 (1761)
++|||+|||+|++ |+| |+ ++|.||+||+||++|+||+|.|||+ +|.+||+|.+|+
T Consensus 443 ------~~gw~~TGDlg~~------d~d--------G~----l~i~GR~~d~i~~~G~~i~p~eIE~-~l~~~p~V~~a~ 497 (632)
T PRK07529 443 ------EDGWLNTGDLGRI------DAD--------GY----FWLTGRAKDLIIRGGHNIDPAAIEE-ALLRHPAVALAA 497 (632)
T ss_pred ------CCCceEcCcEEEE------cCC--------ce----EEEEecccCEEEeCCEEECHHHHHH-HHHhCCCeeEEE
Confidence 5799999999999 999 99 9999999999999999999999999 899999999999
Q ss_pred EEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCC
Q psy14338 1680 VFTW-----TNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 1753 (1761)
Q Consensus 1680 Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~ 1753 (1761)
|++. ++.++++|++. +...+.++++++++++ |++.+++|+.|++++ +||+|++||++|++|++.+....++
T Consensus 498 vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~-l~~~~~~P~~i~~v~--~lP~t~~GKi~r~~Lr~~~~~~~~~ 574 (632)
T PRK07529 498 AVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDH-IAERAAVPKHVRILD--ALPKTAVGKIFKPALRRDAIRRVLR 574 (632)
T ss_pred EEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHh-cchhccCCcEEEEec--CCCCCCCCcccHHHHHHHHHHHHHH
Confidence 9974 55788898874 3456678999999997 764689999999999 9999999999999999988665443
|
|
| >PRK06839 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-60 Score=613.36 Aligned_cols=485 Identities=17% Similarity=0.231 Sum_probs=408.4
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
.+.+.|+++|+++||++|+++.+ +.+||+||.++++++|+.|++ ..|+++|++|+++++|+ ++++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~------~~~ty~~l~~~~~~la~~L~~-------~~g~~~~~~V~i~~~~~--~~~~ 67 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEE------EEMTYKQLHEYVSKVAAYLIY-------ELNVKKGERIAILSQNS--LEYI 67 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECC------ceEEHHHHHHHHHHHHHHHHH-------hcCCCCCCEEEEECCCC--HHHH
Confidence 47889999999999999999754 699999999999999999972 25799999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----cceeccCCCcceeEEecc
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----EVVAFKGWPKLTWFVTEH 237 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 237 (1761)
+++|||+++|++++|+++.++.+ ++.+++++++++++++++.....+...... ..+.+.+. .+.
T Consensus 68 ~~~la~~~~G~~~~~~~~~~~~~-----~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 135 (496)
T PRK06839 68 VLLFAIAKVECIAVPLNIRLTEN-----ELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSL-------KEI 135 (496)
T ss_pred HHHHHHHhcCcEEEecCcccCHH-----HHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecch-------Hhh
Confidence 99999999999999999999876 799999999999999987755433222110 11111110 000
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTS 317 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~ 317 (1761)
..... .......++++++|+|||||||.||||+++|+++..........++++.+|+++.++|++|..++...++.+
T Consensus 136 ~~~~~---~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~ 212 (496)
T PRK06839 136 EDRKI---DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPT 212 (496)
T ss_pred hccCC---CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHH
Confidence 01111 112234678999999999999999999999999987777777778899999999999999999887656889
Q ss_pred HhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHH
Q psy14338 318 VLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFL 397 (1761)
Q Consensus 318 L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~ 397 (1761)
+..|+++++++ .+++..+++.++++++|++..+| +++..++........+++++|.+++| |+++++++.+.|.
T Consensus 213 l~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~g--G~~~~~~~~~~~~ 285 (496)
T PRK06839 213 LFAGGVIIVPR----KFEPTKALSMIEKHKVTVVMGVP-TIHQALINCSKFETTNLQSVRWFYNG--GAPCPEELMREFI 285 (496)
T ss_pred HhcCcEEEEcc----CCCHHHHHHHHHhhCCeEEEehH-HHHHHHHhCcccccCCCcccceEEEC--CCCCCHHHHHHHH
Confidence 99999999887 67999999999999999999986 58888877665555678899999999 9999999999988
Q ss_pred HHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEE
Q psy14338 398 SVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTV 477 (1761)
Q Consensus 398 ~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I 477 (1761)
+. |++ +++.||+||++..++..... .......++|+|+++++++|
T Consensus 286 ~~----g~~---~~~~YG~tE~~~~~~~~~~~----------------------------~~~~~~~~~G~p~~~~~~~i 330 (496)
T PRK06839 286 DR----GFL---FGQGFGMTETSPTVFMLSEE----------------------------DARRKVGSIGKPVLFCDYEL 330 (496)
T ss_pred Hh----CCe---eEeeccCCCCCcceEecccc----------------------------cccccCCCCcccCCCceEEE
Confidence 75 554 99999999998644322210 00123568999999999999
Q ss_pred EeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCC
Q psy14338 478 VKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDG 557 (1761)
Q Consensus 478 ~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~ 557 (1761)
+|++++. +|.|+.|||+|+|+.++.||+++|+.|+..|. ++||+|||+|++++||.++|+||.||
T Consensus 331 ~d~~~~~--~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------~g~~~TGDl~~~~~~g~~~~~GR~~d 395 (496)
T PRK06839 331 IDENKNK--VEVGEVGELLIRGPNVMKEYWNRPDATEETIQ-------------DGWLCTGDLARVDEDGFVYIVGRKKE 395 (496)
T ss_pred ECCCcCC--CCCCCceEEEEECCCcchhhcCChHHHHHHHc-------------CCCeeecceEEEcCCCcEEEeccccc
Confidence 9999974 99999999999999999999999999998873 78999999999999999999999999
Q ss_pred eEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhccee
Q psy14338 558 LMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQV 634 (1761)
Q Consensus 558 qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i 634 (1761)
+||++|.+|+|.|||+.|.+++.+ .+++|++.++ ..++.++++++.+++ .+.+++++++++.|+.|++|..+
T Consensus 396 ~i~~~G~~v~p~~iE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~ 470 (496)
T PRK06839 396 MIISGGENIYPLEVEQVINKLSDV-----YEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRLFLAKYKIPKEI 470 (496)
T ss_pred eEEECCEEECHHHHHHHHHhCCCe-----eEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCcEE
Confidence 999999999999999999998887 7999999885 457889999998754 56789999999999999999986
Q ss_pred eeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 635 GLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 635 ~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+.++++|+|++||++|++|+++..
T Consensus 471 -------~~v~~~P~t~~GKi~r~~l~~~~~ 494 (496)
T PRK06839 471 -------VFLKELPKNATGKIQKAQLVNQLK 494 (496)
T ss_pred -------EEeccCCCCccccccHHHHHHHhh
Confidence 556999999999999999998764
|
|
| >PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-60 Score=615.65 Aligned_cols=489 Identities=19% Similarity=0.236 Sum_probs=406.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|+++++.+|+++|+...+ +.+||+||.++++++|..|. +.|+++|++|+++++|+ ++
T Consensus 20 ~~~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~--------~~gi~~g~~V~v~~~n~--~~ 83 (542)
T PRK06155 20 ERTLPAMLARQAERYPDRPLLVFGG------TRWTYAEAARAAAAAAHALA--------AAGVKRGDRVALMCGNR--IE 83 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEeCC------ccccHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--hH
Confidence 4679999999999999999998765 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCc----c
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPK----L 230 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~----~ 230 (1761)
+++++|||+++|++++|++|.++.+ ++.++++++++++++++......+..... ..++..+.... .
T Consensus 84 ~~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (542)
T PRK06155 84 FLDVFLGCAWLGAIAVPINTALRGP-----QLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPA 158 (542)
T ss_pred HHHHHHHHHHhCCEEEEeccccCHH-----HHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCcccccccc
Confidence 9999999999999999999999977 89999999999999998765443322111 01111111000 0
Q ss_pred eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhh
Q psy14338 231 TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
.|...+ ... ...........++++|+|+|||||||.||||+++|+++.+........+++++++++++++|++|..++
T Consensus 159 ~~~~~~-~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~ 236 (542)
T PRK06155 159 GWSTAP-LPP-LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNAL 236 (542)
T ss_pred ccchhh-hcc-cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHH
Confidence 000000 000 000111223467899999999999999999999999999888888888999999999999999999999
Q ss_pred HHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCH
Q psy14338 311 WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSL 390 (1761)
Q Consensus 311 ~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~ 390 (1761)
.. ++.+++.|+++++.+ .+++..+++.|+++++|++.++| +++..++..........+++|.++.| | +++
T Consensus 237 ~~-~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~p-~~~~~l~~~~~~~~~~~~~l~~~~~g--~--~~~ 306 (542)
T PRK06155 237 NA-FFQALLAGATYVLEP----RFSASGFWPAVRRHGATVTYLLG-AMVSILLSQPARESDRAHRVRVALGP--G--VPA 306 (542)
T ss_pred HH-HHHHHHcCceEEeeC----CCCHHHHHHHHHHhCCcEEEchH-HHHHHHHcCcCccccccCceEEEEEc--C--CCH
Confidence 85 899999999999987 67899999999999999999986 47777776654444556789987755 5 468
Q ss_pred HHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC
Q psy14338 391 SSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM 470 (1761)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 470 (1761)
.+.++|.+.+ |++ ++|.||+||++.++..... .....++|+|+
T Consensus 307 ~~~~~~~~~~---~~~---v~~~YG~tE~~~~~~~~~~-------------------------------~~~~~~vG~~~ 349 (542)
T PRK06155 307 ALHAAFRERF---GVD---LLDGYGSTETNFVIAVTHG-------------------------------SQRPGSMGRLA 349 (542)
T ss_pred HHHHHHHHHc---CCC---EEeeecccccCccccCCCC-------------------------------CCCCCCcCccC
Confidence 8899998887 554 9999999999865442210 12356899999
Q ss_pred CCcEEEEEeCCCCcccCCCCCceEEEEecC---CccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 471 PGCIMTVVKMDSPSYLCKTDEVGEICVAST---GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 471 ~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~---~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
++++++|+|++++ ++|.|+.|||+|+|+ +++.||+++++.|++.|. ++||+|||+|++++||
T Consensus 350 ~~~~~~i~d~~~~--~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~-------------~~~~~TGD~~~~~~dG 414 (542)
T PRK06155 350 PGFEARVVDEHDQ--ELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWR-------------NLWFHTGDRVVRDADG 414 (542)
T ss_pred CCceEEEECCCCC--CCCCCCceEEEEecCCccccchhhcCCHHHHHHhhc-------------CCcEeccceEEEcCCc
Confidence 9999999999886 599999999999999 799999999999999884 7899999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHH
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRV 624 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~ 624 (1761)
+++|+||+||+||++|.+|+|.|||+++.+++.| .+++|+++++. .++.++++++...+ .+..+++++|+++
T Consensus 415 ~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V-----~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 489 (542)
T PRK06155 415 WFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAV-----AAAAVFPVPSELGEDEVMAAVVLRDGTALEPVALVRHCEPR 489 (542)
T ss_pred eEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCe-----eEEEEEeecccccCceEEEEEEECCCCCCCHHHHHHHHHhh
Confidence 9999999999999999999999999999998888 79999998864 55778888876543 5778999999999
Q ss_pred HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 625 LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 625 Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
|+.|++|..+ +.++++|+|++||++|++|++++.
T Consensus 490 l~~~~~P~~i-------~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 490 LAYFAVPRYV-------EFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred CcCccCCcEE-------EEeccCCCCcccceeHHHHHhhcc
Confidence 9999999986 456999999999999999998764
|
|
| >PLN02574 4-coumarate--CoA ligase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-60 Score=619.11 Aligned_cols=486 Identities=16% Similarity=0.236 Sum_probs=391.1
Q ss_pred CCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHh-hcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1180 GAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLE-RAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~-~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
++|+++|++..+ .+.++||+||+++++++|+.|.+ . |+++||+|+|+++|++++++++|||+++|++++|++|.+
T Consensus 51 ~~~~~~a~~~~~---~~~~~Ty~el~~~~~~lA~~L~~~~-G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~ 126 (560)
T PLN02574 51 NHNGDTALIDSS---TGFSISYSELQPLVKSMAAGLYHVM-GVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSS 126 (560)
T ss_pred ccCCCCEEEECC---CCCcccHHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCccc
Confidence 569999998311 23479999999999999999999 8 999999999999999999999999999999999999987
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccC-CCCc-------cchhhhccCCCCCCC
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDT-DDMP-------KKKLAALYRAPTAEM 1330 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~ 1330 (1761)
+.+ ++.++++++++++++++......+...... .+........... .... ............+++
T Consensus 127 ~~~------~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (560)
T PLN02574 127 SLG------EIKKRVVDCSVGLAFTSPENVEKLSPLGVP-VIGVPENYDFDSKRIEFPKFYELIKEDFDFVPKPVIKQDD 199 (560)
T ss_pred CHH------HHHHHHHhcCCEEEEECHHHHHHHHhcCCc-EEecCcccccccCccCcccHHHHhhcCCcccccCCCCcCC
Confidence 777 999999999999999998766555432111 1110000000000 0000 000011122346789
Q ss_pred EEEEEeccCCCCCCceEEccHHHHHHHHHHHHH----HcCc-CCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCC
Q psy14338 1331 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----ACEL-YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 1405 (1761)
Q Consensus 1331 ~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~ 1405 (1761)
+++|+|||||||.||||+++|+++.+.+..+.. .+.. ..+++.+..+|++|..++...++.++..|+++++.+.
T Consensus 200 ~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~- 278 (560)
T PLN02574 200 VAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRR- 278 (560)
T ss_pred EEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecC-
Confidence 999999999999999999999999988776543 2222 2446677788888888886667788889999998874
Q ss_pred ccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCC
Q psy14338 1406 EVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGL 1485 (1761)
Q Consensus 1406 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~ 1485 (1761)
+++..+++.|+++++|+++++|+++..|++... .....++++||.+++||+++++ .+.+++.+.++.
T Consensus 279 ---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------~~~~~~~~~lr~~~~gg~~l~~-~~~~~~~~~~~~--- 345 (560)
T PLN02574 279 ---FDASDMVKVIDRFKVTHFPVVPPILMALTKKAK------GVCGEVLKSLKQVSCGAAPLSG-KFIQDFVQTLPH--- 345 (560)
T ss_pred ---CCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcc------ccccCccccceEEEEecccCCH-HHHHHHHHHCCC---
Confidence 789999999999999999999999999976311 1124568899999999999999 777888777642
Q ss_pred CCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCC
Q psy14338 1486 SPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGD 1565 (1761)
Q Consensus 1486 ~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~ 1565 (1761)
..+++.||+||++.++........ ..+..++|+|++|++++|+|+++++++|.
T Consensus 346 --~~v~~~YG~tE~~~~~~~~~~~~~-------------------------~~~~~~vG~~~~~~~v~i~d~~~g~~~~~ 398 (560)
T PLN02574 346 --VDFIQGYGMTESTAVGTRGFNTEK-------------------------LSKYSSVGLLAPNMQAKVVDWSTGCLLPP 398 (560)
T ss_pred --CcEEecccccccCceeecCCCccc-------------------------cCCCCceeeeCCCcEEEEEeCCCCcCCCC
Confidence 579999999998754432111000 01124599999999999999877999999
Q ss_pred CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEE
Q psy14338 1566 SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVV 1645 (1761)
Q Consensus 1566 G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~ 1645 (1761)
|+.|||||+|++++.||++ +|+.|++.| ..+|||+|||+|++ |+| |+ ++|+
T Consensus 399 g~~Gei~v~g~~~~~GY~~---~~~~t~~~~--------~~~g~~~TGDlg~~------~~~--------G~----l~i~ 449 (560)
T PLN02574 399 GNCGELWIQGPGVMKGYLN---NPKATQSTI--------DKDGWLRTGDIAYF------DED--------GY----LYIV 449 (560)
T ss_pred CCCeEEEEECcchhhhhcC---ChhHhhhhc--------cCCCCcccceEEEE------ECC--------Ce----EEEE
Confidence 9999999999999999999 999999998 45799999999999 899 99 9999
Q ss_pred cccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCcee
Q psy14338 1646 GALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIV 1719 (1761)
Q Consensus 1646 GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP 1719 (1761)
||+||+||++|+||+|.|||. +|..||+|.+++|++. ++.++++|+.. +...+.++++++++++ |+ .|+.|
T Consensus 450 GR~~d~i~~~G~~v~~~eiE~-~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~-l~-~~~~p 526 (560)
T PLN02574 450 DRLKEIIKYKGFQIAPADLEA-VLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGSTLSQEAVINYVAKQ-VA-PYKKV 526 (560)
T ss_pred ecchhheEECCEEECHHHHHH-HHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCCCCHHHHHHHHHHh-cc-CcccC
Confidence 999999999999999999999 8999999999999974 34677888764 3445668999999997 88 89999
Q ss_pred eEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1720 GVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1720 ~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
+.+++++ +||+|++||++|+.|++.+.+.+
T Consensus 527 ~~v~~v~--~iP~t~~GKi~r~~L~~~~~~~~ 556 (560)
T PLN02574 527 RKVVFVQ--SIPKSPAGKILRRELKRSLTNSV 556 (560)
T ss_pred cEEEEee--ccCCCCcchhhHHHHHHHHhhcc
Confidence 9999999 99999999999999999986654
|
|
| >PRK08315 AMP-binding domain protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-60 Score=618.92 Aligned_cols=504 Identities=17% Similarity=0.249 Sum_probs=413.7
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..+|.++|.++++++|+++|+.+.+.+ +.+||+||.++++++|+.|. +.|+++|++|+++++|+ ++
T Consensus 15 ~~~l~~~l~~~~~~~~~~~ai~~~~~~----~~~Ty~~l~~~~~~~a~~L~--------~~gi~~g~~V~i~~~~~--~~ 80 (559)
T PRK08315 15 EQTIGQLLDRTAARYPDREALVYRDQG----LRWTYREFNEEVDALAKGLL--------ALGIEKGDRVGIWAPNV--PE 80 (559)
T ss_pred hccHHHHHHHHHHHCCCCeEEEEcCCC----eEEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--hH
Confidence 468999999999999999999986533 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc-----C----cccc-------------
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG-----L----PKTA------------- 217 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~-----~----~~~~------------- 217 (1761)
+++++|||+++|++++|++|.++.+ ++..+++++++++++++...... + ....
T Consensus 81 ~~~~~la~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (559)
T PRK08315 81 WVLTQFATAKIGAILVTINPAYRLS-----ELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLP 155 (559)
T ss_pred HHHHHHHHHHhCeEEEecCccCCHH-----HHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCC
Confidence 9999999999999999999999876 89999999999999998754211 0 0000
Q ss_pred -cccceeccCCCcceeEEeccccCCC-----CC-CCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc
Q psy14338 218 -AGEVVAFKGWPKLTWFVTEHLAKTP-----KD-WAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC 290 (1761)
Q Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 290 (1761)
...++.............+.+.... .. ........+++++|++|||||||.||||.++|+++...+......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~ 235 (559)
T PRK08315 156 ELRRVIFLGDEKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM 235 (559)
T ss_pred CceeEEeecccCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc
Confidence 0000000000000000000000000 00 0112234678999999999999999999999999999999888899
Q ss_pred CCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCC
Q psy14338 291 HYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKD 370 (1761)
Q Consensus 291 ~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~ 370 (1761)
++.++|+++..+|++|..+++..++.+|..|+++++... .+++..+++.++++++|++.++| +++..++.......
T Consensus 236 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~---~~~~~~~~~~l~~~~~t~~~~~P-~~~~~~~~~~~~~~ 311 (559)
T PRK08315 236 KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE---GFDPLATLAAVEEERCTALYGVP-TMFIAELDHPDFAR 311 (559)
T ss_pred CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecC---CCCHHHHHHHHHHcCCeEEecch-HHHHHHHhCcccCC
Confidence 999999999999999999987678999999999997654 67899999999999999999996 47777776655555
Q ss_pred CCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCccccee
Q psy14338 371 ISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVV 450 (1761)
Q Consensus 371 ~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 450 (1761)
.++++||.+++| |++++.+++++|.+.++ .. .++|.||+||++.+++.....
T Consensus 312 ~~~~~lr~~~~~--G~~~~~~~~~~~~~~~~---~~--~l~~~YG~tE~~~~~~~~~~~--------------------- 363 (559)
T PRK08315 312 FDLSSLRTGIMA--GSPCPIEVMKRVIDKMH---MS--EVTIAYGMTETSPVSTQTRTD--------------------- 363 (559)
T ss_pred CCchhhheeEec--CCCCCHHHHHHHHHHcC---Cc--ceeEEEcccccccceeecCcc---------------------
Confidence 678899999999 99999999999998883 32 499999999998766543311
Q ss_pred eecCCCccCcccccccCCCCCCcEEEEEeCC-CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCcc
Q psy14338 451 RVDQENSLTSLTLQDCGQVMPGCIMTVVKMD-SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTAL 529 (1761)
Q Consensus 451 ~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~-~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~ 529 (1761)
.....+..++|+|++|++++|+|++ ++ ++|.|+.|||+|+|+++++||+++|+.|++.|.
T Consensus 364 ------~~~~~~~~~vG~p~~~~~v~i~d~~~~~--~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~----------- 424 (559)
T PRK08315 364 ------DPLEKRVTTVGRALPHLEVKIVDPETGE--TVPRGEQGELCTRGYSVMKGYWNDPEKTAEAID----------- 424 (559)
T ss_pred ------cchhhccCCCCccCCCcEEEEEcCccCC--cCCCCCceEEEEECchhhhhhcCChhHHhhcCC-----------
Confidence 0001235789999999999999998 75 699999999999999999999999999998873
Q ss_pred CCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEe
Q psy14338 530 SQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQ 608 (1761)
Q Consensus 530 ~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~ 608 (1761)
.++||||||+|++++||.++|+||+|++||++|+||++.|||+++.+++.+ .+++|++.++. .++.++++++.
T Consensus 425 -~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~ 498 (559)
T PRK08315 425 -ADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKI-----QDVQVVGVPDEKYGEEVCAWIIL 498 (559)
T ss_pred -CCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCc-----eEEEEEecCCCCCCeEEEEEEEe
Confidence 378999999999999999999999999999999999999999999998877 79999988754 46788888887
Q ss_pred CCC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 609 RPD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 609 ~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
..+ .+.++++++++++||.|++|..+ +.++++|+|++||++|++|++++..
T Consensus 499 ~~~~~~~~~~l~~~l~~~l~~~~~P~~i-------~~v~~lP~t~~GK~~r~~L~~~~~~ 551 (559)
T PRK08315 499 RPGATLTEEDVRDFCRGKIAHYKIPRYI-------RFVDEFPMTVTGKIQKFKMREMMIE 551 (559)
T ss_pred CCCCCCCHHHHHHHHHhhcccccCCcEE-------EEcccCCCCCCCceeHHHHHHHHHh
Confidence 543 56789999999999999999986 5569999999999999999987654
|
|
| >PLN02614 long-chain acyl-CoA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-61 Score=632.04 Aligned_cols=508 Identities=15% Similarity=0.156 Sum_probs=385.5
Q ss_pred ccccccccccCCCCcCCCCCCCceEEcc---CC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVD---TR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d---~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
++++.|.+.+. ++||++|+...+ +. .....+||+||+++++++|+.|++. |+++||+|+|+++|+++|++
T Consensus 46 t~~~~l~~~a~-----~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-Gv~~Gd~Vai~~~n~~e~~~ 119 (666)
T PLN02614 46 SCWDVFRMSVE-----KYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSV-GVKDEAKCGIYGANSPEWII 119 (666)
T ss_pred cHHHHHHHHHH-----hCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHH
Confidence 55666666554 779999998532 11 1124589999999999999999999 99999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc------ccccccc---------
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS------NVVDIKS--------- 1304 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~------~~~~~~~--------- 1304 (1761)
++|||+++|+++|||+|.++.+ ++++++++++++++|++.+....+...... .++....
T Consensus 120 ~~lA~~~~Gav~vpl~~~~~~~------~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~ 193 (666)
T PLN02614 120 SMEACNAHGLYCVPLYDTLGAG------AVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEA 193 (666)
T ss_pred HHHHHHHcCCEEEEecCCCCHH------HHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhh
Confidence 9999999999999999977777 999999999999999987654433211100 0110000
Q ss_pred ---------CCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc-----CcCCC
Q psy14338 1305 ---------WPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC-----ELYPS 1370 (1761)
Q Consensus 1305 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~ 1370 (1761)
+..++.... ..........++|+|+|+|||||||.||||++||+|+++.+.+....+ ++.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~ 269 (666)
T PLN02614 194 ETFGLVIYAWDEFLKLGE----GKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVK 269 (666)
T ss_pred hhcCcEEEEHHHHHhhcc----cCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCC
Confidence 000000000 000111234679999999999999999999999999999887765544 57788
Q ss_pred CeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhh--
Q psy14338 1371 RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLK-- 1448 (1761)
Q Consensus 1371 d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~-- 1448 (1761)
|+++.++|++|.++... .+..++.|+++++.+ +++..+++.|+++++|+++++|++++.+.+.+...+....
T Consensus 270 d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~ 343 (666)
T PLN02614 270 DVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-----GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFL 343 (666)
T ss_pred cEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHH
Confidence 99999999999888743 556688999998865 4889999999999999999999999988753211000000
Q ss_pred ------------------------ccC-----------CCC-CcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccc
Q psy14338 1449 ------------------------ARN-----------IAL-GCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVST 1492 (1761)
Q Consensus 1449 ------------------------~~~-----------~~l-~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~ 1492 (1761)
..+ ..+ ++||.+++||+++++ .+ ++|.+.+.. +.+++
T Consensus 344 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~-~~-~~~~~~~~~-----~~i~~ 416 (666)
T PLN02614 344 KKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLAS-HV-ESFLRVVAC-----CHVLQ 416 (666)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCH-HH-HHHHHHhcC-----CCEEe
Confidence 000 011 689999999999997 55 455555421 57999
Q ss_pred cccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEc-CC-CCCCCCCCcceE
Q psy14338 1493 SFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIAN-PE-TKGQCGDSHLGE 1570 (1761)
Q Consensus 1493 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~-~~~~~p~G~~GE 1570 (1761)
.||+||++..++.... . ...+.+++|+|+||++++|+| ++ .++++|.|+.||
T Consensus 417 ~YG~TE~~~~~~~~~~--~------------------------~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GE 470 (666)
T PLN02614 417 GYGLTESCAGTFVSLP--D------------------------ELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGE 470 (666)
T ss_pred eCchHhhhhheeeecc--c------------------------cCCcCCcccCcCCceEEEEeeecccCcccCCCCCCce
Confidence 9999997643221110 0 000134699999999999998 33 247899999999
Q ss_pred EEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCC
Q psy14338 1571 IWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDE 1650 (1761)
Q Consensus 1571 L~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd 1650 (1761)
|+|+||+++.|||+ +|+.|++.| .+|||+|||+|++ |+| |+ |+|+||+||
T Consensus 471 l~vrGp~v~~GY~~---~pe~T~~~f---------~dGw~~TGDlg~~------d~d--------G~----l~i~gR~kd 520 (666)
T PLN02614 471 ICIRGKTLFSGYYK---REDLTKEVL---------IDGWLHTGDVGEW------QPN--------GS----MKIIDRKKN 520 (666)
T ss_pred EEEcCCcccccccC---CHHHhhhhh---------ccCCcccceEEEE------cCC--------CC----EEEEEcchh
Confidence 99999999999999 999999999 2689999999999 999 99 999999999
Q ss_pred eEEe-CCeecChHHHHHHHHHhccCcceeEEEeeCC--eEEEEEEeCCCch-----------h----------H----hh
Q psy14338 1651 TIML-RGMRYHPIDIENSVMRAHKKIAECAVFTWTN--LLVVVVELDGNES-----------E----------A----LD 1702 (1761)
Q Consensus 1651 ~Iki-~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~~--~~~a~v~~~~~~~-----------~----------~----~~ 1702 (1761)
+||+ +|+||+|.|||+ ++.+||.|.+|+|++.+. .++|+|+++.... + . ++
T Consensus 521 ~ik~~~G~~V~p~eIE~-~l~~~p~V~~~~V~g~~~~~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 599 (666)
T PLN02614 521 IFKLSQGEYVAVENIEN-IYGEVQAVDSVWVYGNSFESFLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGE 599 (666)
T ss_pred ceecCCCeeecHHHHHH-HHhcCCCeeEEEEEecCCcceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHH
Confidence 9996 699999999999 899999999999999873 6888888642210 0 0 11
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCc-----cCCCchhhhHHHHHHHHHcCCCChhhhhcC
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVV-----PINSRGEKQRMHLRDGFLADQLDPIYVAYN 1760 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~l-----P~t~~GKvdR~~L~~~~~~~~~~~~~~~~~ 1760 (1761)
+.+..+++.|+ .|..++.|.+++. .| -+||++|+.|+.+.+.| +.+++++|..+|
T Consensus 600 ~~~~~~~~~l~-~~e~i~~~~l~~~-~f~~~ng~lTpt~K~kR~~i~~~y-~~~i~~ly~~~~ 659 (666)
T PLN02614 600 LVKMAKEKKMK-GFEIIKAIHLDPV-PFDMERDLLTPTFKKKRPQLLKYY-QSVIDEMYKTTN 659 (666)
T ss_pred HHHHHHHcCCC-CcceeeEEEEeCC-CCCCcCCcCCHhhhhhHHHHHHHH-HHHHHHHHHhhh
Confidence 22222233487 8999999998873 33 38999999999999999 788999998776
|
|
| >TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-60 Score=616.22 Aligned_cols=496 Identities=18% Similarity=0.253 Sum_probs=402.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|+++++.+|+++|+.+.+......+.+||+||+++++++|.+|+ +.|+++|++|+++++|+ .+
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~--------~~g~~~g~~V~i~~~~~--~~ 90 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLA--------RLGVGRGDVVSFQLPNR--WE 90 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HH
Confidence 357999999999999999999864321111158999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc--------Ccc-ccc-ccceeccCCCc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG--------LPK-TAA-GEVVAFKGWPK 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~--------~~~-~~~-~~~~~~~~~~~ 229 (1761)
+++++|||+++|+++||++|.++.+ ++.+++++++++++++++..... +.. ... ..++..+....
T Consensus 91 ~~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (538)
T TIGR03208 91 FTALYLACARIGAVLNPLMPIFRER-----ELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGD 165 (538)
T ss_pred HHHHHHHHHhcCEEEeccCcccCHH-----HHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCC
Confidence 9999999999999999999999876 89999999999999998754210 000 000 01111110000
Q ss_pred ceeEEecccc-----CCCC--CCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEcc
Q psy14338 230 LTWFVTEHLA-----KTPK--DWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVL 302 (1761)
Q Consensus 230 ~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~ 302 (1761)
..+ ...+. ..+. .........++++|+++|||||||.||||+++|+++...+......+++..+|++++++
T Consensus 166 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~ 243 (538)
T TIGR03208 166 DSF--DRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMAS 243 (538)
T ss_pred cCH--HHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeC
Confidence 000 00000 0000 00011235679999999999999999999999999999998888888999999999999
Q ss_pred CCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEec
Q psy14338 303 DFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVG 382 (1761)
Q Consensus 303 ~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~g 382 (1761)
|++|..++...++.+++.|+++++.+ .+++..+++.++++++|++..+|+ ++..++........+++++|.+++|
T Consensus 244 pl~h~~g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~vt~~~~~p~-~~~~l~~~~~~~~~~~~~l~~~~~g 318 (538)
T TIGR03208 244 PMAHQTGFMYGLMMPLILNATAVLQD----IWNPARAAELIRETGVTFTMASTP-FLTDLCRAVKESGAPVPSLFTFLCA 318 (538)
T ss_pred CchhHHHHHHHHHHHHHcCCEEEecC----ccCHHHHHHHHHHhCCeEEecCHH-HHHHHHhchhccCCCCCcceEEEEc
Confidence 99999887666899999999999987 679999999999999999999875 6666654433334567899999999
Q ss_pred CCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCccc
Q psy14338 383 DGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLT 462 (1761)
Q Consensus 383 g~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1761)
|+++++++.++|.+.+ |.+ ++|.||+||++.+++..+.. .....
T Consensus 319 --G~~~~~~~~~~~~~~~---~~~---~~~~YG~tE~~~~~~~~~~~----------------------------~~~~~ 362 (538)
T TIGR03208 319 --GAPIPGILVERAWELL---GAL---IVSAWGMTENGAVTVTEPDD----------------------------ALEKA 362 (538)
T ss_pred --CCCCCHHHHHHHHHHc---CCe---EEeeeccCcCCCccccCccc----------------------------chhhc
Confidence 9999999999999887 443 99999999998765533311 00112
Q ss_pred ccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEE
Q psy14338 463 LQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGF 542 (1761)
Q Consensus 463 ~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~ 542 (1761)
..++|+|++|++++|+|++++ +++.|+.|||+|+|++++.||+++|+.|+. +.++||+|||+|+
T Consensus 363 ~~~~G~~~~g~~v~i~~~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~--------------~~~~~~~TGD~~~ 426 (538)
T TIGR03208 363 STTDGRPLPGVEVKVIDANGA--KLSQGETGRLLVRGCSNFGGYLKRPHLNST--------------DAEGWFDTGDLAF 426 (538)
T ss_pred cCcccccCCCCEEEEECCCCC--CCcCCCCcEEEEecCcccccccCCcccccc--------------cCCCceeccceEE
Confidence 457999999999999999886 589999999999999999999999998752 1378999999999
Q ss_pred EeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHH
Q psy14338 543 LGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQ 619 (1761)
Q Consensus 543 ~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~ 619 (1761)
+++||+++|+||+||+||++|++|+|.|||+.|.+++.+ .+++|++.++. .++.+++++++..+ .+.+++++
T Consensus 427 ~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~ 501 (538)
T TIGR03208 427 QDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAV-----AQVAIVAYPDERLGERACAVVVPKPGCTLDFAAMVA 501 (538)
T ss_pred ECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcce-----eeEEEEeccCCCCCceEEEEEEECCCCCCCHHHHHH
Confidence 999999999999999999999999999999999988877 68999998753 56889999987654 57788999
Q ss_pred HHHH-HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHH
Q psy14338 620 WMSR-VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECK 661 (1761)
Q Consensus 620 ~l~~-~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~ 661 (1761)
++++ +++.||+|..+ +.++++|+|++||++|++|+
T Consensus 502 ~~~~~~l~~~~~P~~i-------~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 502 FLKAQKVALQYIPERL-------EVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred HHHhcchhhccCCcEE-------EEeccCCCCCccccchHhhc
Confidence 9986 79999999986 55699999999999999986
|
Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris. |
| >PTZ00216 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-60 Score=635.97 Aligned_cols=532 Identities=15% Similarity=0.157 Sum_probs=387.6
Q ss_pred CCCCCCCCCCCCCcCCCCCCccccCCCcchhHHHHHHHHhhhcCCCcEEEEECC-----------CCc----------ee
Q psy14338 52 PKDPNAPKPEGGVMTPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDP-----------NGK----------LS 110 (1761)
Q Consensus 52 ~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~a~~~pd~~Av~~~d~-----------~g~----------~~ 110 (1761)
..+|+.++...+.+...+...+...++...+++++|+++++++||++|+.+.+. +|. +.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (700)
T PTZ00216 40 ETENASAIYRIAGVTDEEHERLRNEWYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNET 119 (700)
T ss_pred CCCCCCCcccCcccccchhcccccccCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCc
Confidence 345566666666666555544443344457899999999999999999998521 111 23
Q ss_pred EEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhH
Q psy14338 111 ITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQ 190 (1761)
Q Consensus 111 ~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~r 190 (1761)
+.+||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++|++++|||+++|+++||+++.++++ +
T Consensus 120 ~~lTy~el~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~v~vpl~~~~~~~-----~ 184 (700)
T PTZ00216 120 RYITYAELWERIVNFGRGLA--------ELGLTKGSNVAIYEETR--WEWLASIYGIWSQSMVAATVYANLGED-----A 184 (700)
T ss_pred eEeEHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCCeEEeeCCCCCHH-----H
Confidence 78999999999999999999 89999999999999999 999999999999999999999999876 8
Q ss_pred HHHHHhcCCCcEEEEcccccccCccc------ccccceeccCCCc------ceeEEeccc-cCC---CCCCCCCCCCCCC
Q psy14338 191 IGFLLGSCDIQVALTSDACLKGLPKT------AAGEVVAFKGWPK------LTWFVTEHL-AKT---PKDWAPQPRLTDD 254 (1761)
Q Consensus 191 l~~il~~~~~~~vl~~~~~~~~~~~~------~~~~~~~~~~~~~------~~~~~~~~~-~~~---~~~~~~~~~~~~~ 254 (1761)
+.+++++++++++|++......+... ....++..+..+. ......+.+ ... ...........++
T Consensus 185 l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (700)
T PTZ00216 185 LAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENND 264 (700)
T ss_pred HHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcc
Confidence 99999999999999987543322110 0011222211110 000001100 000 1111112334789
Q ss_pred CcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc----C-CCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCC
Q psy14338 255 TPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC----H-YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPY 329 (1761)
Q Consensus 255 ~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~----~-~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~ 329 (1761)
|+|||+|||||||+||||++||+|+++.+.+....+ + +.++|++++++|++|.++... ....++.|+++++.+
T Consensus 265 d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~~- 342 (700)
T PTZ00216 265 DLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFGS- 342 (700)
T ss_pred cEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEECC-
Confidence 999999999999999999999999999887766544 2 478899999999999988764 556677888776633
Q ss_pred ccccCCHHHHHH-------HHHhcCceEEEecCHHHHHHhhcCCC-------------------------CCCC------
Q psy14338 330 ALMKVNPASWMQ-------MITKYRASVAVVKSRDLHWGLLATKD-------------------------HKDI------ 371 (1761)
Q Consensus 330 ~~~~~~~~~l~~-------~i~~~~vt~~~~~p~~~~~~ll~~~~-------------------------~~~~------ 371 (1761)
+..+.+ .++++++|++..+|. ++..+..... ....
T Consensus 343 ------~~~l~~~~~~~~~~l~~~~pT~~~~vP~-~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 415 (700)
T PTZ00216 343 ------PRTLTDTFARPHGDLTEFRPVFLIGVPR-IFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWN 415 (700)
T ss_pred ------HHHhhhhhccccchHHHcCCcEEEechH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHH
Confidence 344443 688999999999974 6655432100 0000
Q ss_pred ----------CCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCcccc
Q psy14338 372 ----------SLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLS 441 (1761)
Q Consensus 372 ----------~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~ 441 (1761)
..++||.+++| |+++++++.+.+...+ + + ++|+||+||++..++....
T Consensus 416 ~~v~~~~~~~~g~~lr~i~~G--Ga~l~~~~~~~~~~~~---~-~---l~~~YG~TEt~~~~~~~~~------------- 473 (700)
T PTZ00216 416 EKVFSAPRAVLGGRVRAMLSG--GGPLSAATQEFVNVVF---G-M---VIQGWGLTETVCCGGIQRT------------- 473 (700)
T ss_pred HHHHHHHHHHhCCcEEEEEEC--CCCCCHHHHHHHHHHh---h-h---HhhccCcccccccccccCC-------------
Confidence 01589999999 9999999987666655 3 2 9999999999765443221
Q ss_pred ccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccc
Q psy14338 442 MSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTP 521 (1761)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p 521 (1761)
.....+++|+|++|++++|+|+++....++++..|||+|+|+++++||||+|++|+++|.
T Consensus 474 -----------------~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~--- 533 (700)
T PTZ00216 474 -----------------GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLD--- 533 (700)
T ss_pred -----------------CCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhcc---
Confidence 012357899999999999999876433456778899999999999999999999999994
Q ss_pred cccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEE-ECCcccChHHHHHHHHhcCCccccccceE--EEEEEecCC
Q psy14338 522 LLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMT-VTGRKHNADDIIATVLAVEPMKFIYRGRI--AVFSIRVLR 598 (1761)
Q Consensus 522 ~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvk-i~G~rIe~~eIE~~l~~~~~v~~~~~~~a--~v~~~~~~~ 598 (1761)
.+|||||||+|++|+||+|+|+||+||||| ++|+||+|+|||+.+.+++.| .++ +|++. ..
T Consensus 534 ---------~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V-----~~~~~~v~~~--~~ 597 (700)
T PTZ00216 534 ---------EDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELV-----VPNGVCVLVH--PA 597 (700)
T ss_pred ---------ccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCc-----ccceEEEEEe--cC
Confidence 368999999999999999999999999999 899999999999999988877 442 33333 34
Q ss_pred CceEEEEEEeCCC----------C--------CHHHHHHHHHH---------HHHHhhhcceeeeeEEEEeCCCCccCCC
Q psy14338 599 DERICVIAEQRPD----------C--------SEEESFQWMSR---------VLQAVDSIHQVGLYCLALVPPNYLPKTP 651 (1761)
Q Consensus 599 ~~~l~a~v~~~~~----------~--------~~~~l~~~l~~---------~Lp~y~~P~~i~~~~v~~v~~~~lP~t~ 651 (1761)
...++|++++..+ . ...++++.+.+ .|..|..++.+.+..-.| .++.--+|+
T Consensus 598 ~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f-~~~~g~lT~ 676 (700)
T PTZ00216 598 RSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEW-TPENGVLTA 676 (700)
T ss_pred CceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCC-CCCCCCCCh
Confidence 5789999987531 0 11223333322 355666777763221111 134455899
Q ss_pred CCcccHHHHHHHHHc
Q psy14338 652 LGGIHLSECKRRFLE 666 (1761)
Q Consensus 652 ~GKidR~~L~~~~~~ 666 (1761)
++|++|+++.+.|.+
T Consensus 677 t~K~~R~~i~~~y~~ 691 (700)
T PTZ00216 677 AMKLKRRVIDERYAD 691 (700)
T ss_pred hhccchHHHHHHHHH
Confidence 999999999988754
|
|
| >PRK07470 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-60 Score=616.15 Aligned_cols=505 Identities=17% Similarity=0.228 Sum_probs=406.5
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.++|.+.++++|+++|+.+.+ +++||+||+++++++|..|+ +.|+++|++|+++++|+ ++
T Consensus 6 ~~~~~~~~~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~--------~~g~~~g~~v~i~~~~~--~~ 69 (528)
T PRK07470 6 VMNLAHFLRQAARRFPDRIALVWGD------RSWTWREIDARVDALAAALA--------ARGVRKGDRILVHSRNC--NQ 69 (528)
T ss_pred CCCHHHHHHHHHHHCCCceEEEECC------ccccHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCC--HH
Confidence 4578899999999999999998754 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCcceeEE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPKLTWFV 234 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 234 (1761)
+++++|||+++|++++|+++.++.+ ++.+++++++++++++++...+.+..... ..++....... ....
T Consensus 70 ~~~~~lA~~~~G~~~v~l~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 143 (528)
T PRK07470 70 MFESMFAAFRLGAVWVPTNFRQTPD-----EVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARA-GLDY 143 (528)
T ss_pred HHHHHHHHHhCCeEEEecCccCCHH-----HHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcc-cccH
Confidence 9999999999999999999999976 89999999999999999765433221100 01111111000 0000
Q ss_pred eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc--CCCCCCeEEEccCCcchhhhHH
Q psy14338 235 TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC--HYTEGENMVCVLDFKRETGLWH 312 (1761)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~ 312 (1761)
.+................++++++|+|||||||.||||+++|+++...+......+ ++.++|+++.++|++|+.++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~ 223 (528)
T PRK07470 144 EALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQ 223 (528)
T ss_pred HHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHH
Confidence 00111111111122345678999999999999999999999999976655433322 5778899999999999999873
Q ss_pred HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHH
Q psy14338 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSS 392 (1761)
Q Consensus 313 ~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~ 392 (1761)
++ .++.|+++++.+.. .+++..+++.|+++++|++.++| +++..+...+.....+++++|.+++| |+++++..
T Consensus 224 -~~-~~~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~g--G~~l~~~~ 296 (528)
T PRK07470 224 -LC-QVARGAATVLLPSE--RFDPAEVWALVERHRVTNLFTVP-TILKMLVEHPAVDRYDHSSLRYVIYA--GAPMYRAD 296 (528)
T ss_pred -HH-HHhcCceEEEeccc--CcCHHHHHHHHHhcCCeEEechH-HHHHHHHhCcCcCCCCCcceEEEEEc--CCCCCHHH
Confidence 44 67888888877632 57899999999999999999996 47777776655555678899999999 99999999
Q ss_pred HHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCC
Q psy14338 393 CDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPG 472 (1761)
Q Consensus 393 ~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~ 472 (1761)
.++|.+.+ |. .++|.||+||++..++...... ...+.......+++|+|++|
T Consensus 297 ~~~~~~~~---g~---~~~~~YG~TE~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~G~~~~g 348 (528)
T PRK07470 297 QKRALAKL---GK---VLVQYFGLGEVTGNITVLPPAL----------------------HDAEDGPDARIGTCGFERTG 348 (528)
T ss_pred HHHHHHHh---Cc---HHHHhCCCcccCCceeecchhh----------------------ccccccccceeeccCcccCC
Confidence 99998887 43 3999999999876544322100 00000012245789999999
Q ss_pred cEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEE
Q psy14338 473 CIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552 (1761)
Q Consensus 473 ~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~ 552 (1761)
++++|+|++++ +++.|+.|||+|+|+.++.||+++|+.|++.|. ++||+|||+|++++||+++++
T Consensus 349 ~~~~i~d~~~~--~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~-------------~~~~~TGDl~~~~~~g~l~~~ 413 (528)
T PRK07470 349 MEVQIQDDEGR--ELPPGETGEICVIGPAVFAGYYNNPEANAKAFR-------------DGWFRTGDLGHLDARGFLYIT 413 (528)
T ss_pred cEEEEECCCCC--CCCCCCceEEEEeCCccchhhcCCHHHHHhhhc-------------CCcEecceeEEEccCCeEEEe
Confidence 99999999887 589999999999999999999999999999884 789999999999999999999
Q ss_pred eccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhh
Q psy14338 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVLQAVD 629 (1761)
Q Consensus 553 GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~ 629 (1761)
||+||+||++|+||+|.|||+.+.+++.+ .+++|++.++. .++.++++++..++ .+.++++++|++.||.|+
T Consensus 414 GR~dd~i~~~G~~v~~~~IE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 488 (528)
T PRK07470 414 GRASDMYISGGSNVYPREIEEKLLTHPAV-----SEVAVLGVPDPVWGEVGVAVCVARDGAPVDEAELLAWLDGKVARYK 488 (528)
T ss_pred CCccceEEeCCEEECHHHHHHHHHhCCCc-----eEEEEEeccCcccCceeEEEEEECCCCCCCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999988777 79999998754 56778888887654 678899999999999999
Q ss_pred hcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCC
Q psy14338 630 SIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGN 668 (1761)
Q Consensus 630 ~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~ 668 (1761)
+|..+ +.+++||+|+|||++|+.|++.+.+..
T Consensus 489 ~P~~~-------~~~~~iP~t~~GKi~r~~l~~~~~~~~ 520 (528)
T PRK07470 489 LPKRF-------FFWDALPKSGYGKITKKMVREELEERG 520 (528)
T ss_pred CCcEE-------EEeccCCCCCcccccHHHHHHHHHhcc
Confidence 99986 556999999999999999999887643
|
|
| >PLN02330 4-coumarate--CoA ligase-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-60 Score=618.74 Aligned_cols=500 Identities=16% Similarity=0.211 Sum_probs=402.6
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|.++++++|+++|+.+... + +.+||+||.++++++|+.|+ +.|+++|++|+++++|+ +++
T Consensus 28 ~~~~~~l~~~a~~~p~~~a~~~~~~-~---~~~Ty~~l~~~~~~la~~L~--------~~g~~~g~~V~i~~~~~--~~~ 93 (546)
T PLN02330 28 LTLPDFVLQDAELYADKVAFVEAVT-G---KAVTYGEVVRDTRRFAKALR--------SLGLRKGQVVVVVLPNV--AEY 93 (546)
T ss_pred CcHHHHHhhhhhcCCCccEEEecCC-C---CcccHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCc--hHH
Confidence 5789999999999999999986422 2 48999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCc---ceeEEecc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPK---LTWFVTEH 237 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 237 (1761)
++++|||+++|+++||+||.++.+ ++.+++++++++++|+++.....+..... .++....... ..| .+.
T Consensus 94 ~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~--~~~ 165 (546)
T PLN02330 94 GIVALGIMAAGGVFSGANPTALES-----EIKKQAEAAGAKLIVTNDTNYGKVKGLGL-PVIVLGEEKIEGAVNW--KEL 165 (546)
T ss_pred HHHHHHHHHhCcEeccCCccCCHH-----HHHHHHHhcCCeEEEEccchhhhHhhcCC-cEEEecCCCCCCcccH--HHH
Confidence 999999999999999999999876 89999999999999999876654433211 1111111000 001 011
Q ss_pred ccCCC--CCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCC----CCCeEEEccCCcchhhhH
Q psy14338 238 LAKTP--KDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYT----EGENMVCVLDFKRETGLW 311 (1761)
Q Consensus 238 ~~~~~--~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~----~~d~~l~~~~~~~~~~~~ 311 (1761)
+.... ..........++++++|+|||||||+||||+++|+++.+.+... .++.. ..++++.++|++|..++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~p~~h~~g~~ 243 (546)
T PLN02330 166 LEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSS--LFSVGPEMIGQVVTLGLIPFFHIYGIT 243 (546)
T ss_pred HhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHH--hhccCccccCceEEEEecChHHHHHHH
Confidence 11100 00111233457899999999999999999999999998766532 23332 346889999999999887
Q ss_pred HHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCC--ceeEEEecCCCccCC
Q psy14338 312 HSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLS--SLRLLLVGDGANPWS 389 (1761)
Q Consensus 312 ~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~--~Lr~v~~gg~Ge~l~ 389 (1761)
..++.+|..|+++++.+ .+++..+++.++++++|++.++|+ ++..++........+++ ++|.+++| |++++
T Consensus 244 ~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~vt~~~~~P~-~~~~l~~~~~~~~~~~~~~~l~~i~~~--g~~l~ 316 (546)
T PLN02330 244 GICCATLRNKGKVVVMS----RFELRTFLNALITQEVSFAPIVPP-IILNLVKNPIVEEFDLSKLKLQAIMTA--AAPLA 316 (546)
T ss_pred HHHHHHhhcCCEEEEec----ccCHHHHHHHHHHcCCeeeecCCH-HHHHHHhCccccccccchheeeeEEEc--CCcCC
Confidence 55788999999999987 789999999999999999999975 77777765444334444 47899999 99999
Q ss_pred HHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCC
Q psy14338 390 LSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQV 469 (1761)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 469 (1761)
+++.++|.+.++ |. .++|.||+||++.++...... ..........++|+|
T Consensus 317 ~~~~~~~~~~~~--~~---~~~~~YG~tE~~~~~~~~~~~-------------------------~~~~~~~~~~~vG~~ 366 (546)
T PLN02330 317 PELLTAFEAKFP--GV---QVQEAYGLTEHSCITLTHGDP-------------------------EKGHGIAKKNSVGFI 366 (546)
T ss_pred HHHHHHHHHHcC--CC---eEEecccccccccceecCCCc-------------------------cccccccccCccccc
Confidence 999999999875 33 499999999997554322100 000001234689999
Q ss_pred CCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeE
Q psy14338 470 MPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLV 549 (1761)
Q Consensus 470 ~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l 549 (1761)
++|++++|+|++.. .++|.|+.|||+|+|++++.||+|+|+.|++.|. .++||+|||+|++++||.+
T Consensus 367 ~~~~~v~i~d~~~~-~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~------------~~g~~~TGD~~~~~~dG~l 433 (546)
T PLN02330 367 LPNLEVKFIDPDTG-RSLPKNTPGELCVRSQCVMQGYYNNKEETDRTID------------EDGWLHTGDIGYIDDDGDI 433 (546)
T ss_pred cCCcEEEEEeCCCC-ccCCCCCceEEEEecchhhhhhccCccchhhhcc------------CCCceecccEEEEeCCCcE
Confidence 99999999996543 2699999999999999999999999999998872 4789999999999999999
Q ss_pred EEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHH
Q psy14338 550 FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQ 626 (1761)
Q Consensus 550 ~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp 626 (1761)
+|+||+||+||++|++|+|.|||+++.+++.| .+++|+++++ ..++.++++++..++ .+.+++++++++.|+
T Consensus 434 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~ 508 (546)
T PLN02330 434 FIVDRIKELIKYKGFQVAPAELEAILLTHPSV-----EDAAVVPLPDEEAGEIPAACVVINPKAKESEEDILNFVAANVA 508 (546)
T ss_pred EEEechHHhhhcCCEEECHHHHHHHHHhCCch-----heEEEEeccccccCceeEEEEEECCCCCCCHHHHHHHHHHhcc
Confidence 99999999999999999999999999998887 7999999874 467788899887654 567889999999999
Q ss_pred HhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 627 AVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 627 ~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.||+|+.+ +.+++||+|++||++|++|++++..
T Consensus 509 ~~~~p~~~-------~~v~~iP~t~~GK~~r~~L~~~~~~ 541 (546)
T PLN02330 509 HYKKVRVV-------QFVDSIPKSLSGKIMRRLLKEKMLS 541 (546)
T ss_pred cccCceEE-------EEeccCCCCCCcceeHHHHHHHHHh
Confidence 99999986 5569999999999999999998754
|
|
| >PRK08279 long-chain-acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-60 Score=626.63 Aligned_cols=501 Identities=16% Similarity=0.113 Sum_probs=395.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|.++++++|+++|+++.+ +.+||+||.++++++|..|+ +.|+++|++|+|+++|+ .+
T Consensus 36 ~~tl~~~l~~~a~~~p~~~Ai~~~~------~~~Ty~eL~~~~~~la~~L~--------~~g~~~gd~V~i~~~n~--~~ 99 (600)
T PRK08279 36 KRSLGDVFEEAAARHPDRPALLFED------QSISYAELNARANRYAHWAA--------ARGVGKGDVVALLMENR--PE 99 (600)
T ss_pred cccHHHHHHHHHHhCCCCcEEEeCC------CcccHHHHHHHHHHHHHHHH--------hcCCCCCCEEEEECCCC--HH
Confidence 4689999999999999999999865 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----cceeccCCC----cce
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----EVVAFKGWP----KLT 231 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~----~~~ 231 (1761)
+++++|||+++|++++|+++.++.+ ++.+++++++++++|+++...+.+...... ..+...+.. ...
T Consensus 100 ~v~~~lA~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (600)
T PRK08279 100 YLAAWLGLAKLGAVVALLNTQQRGA-----VLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEG 174 (600)
T ss_pred HHHHHHHHHhcCcEEeecCCCCCHH-----HHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCcccccccc
Confidence 9999999999999999999999876 899999999999999998755433221110 000000000 000
Q ss_pred eEEeccc-cCCCCC-CCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 232 WFVTEHL-AKTPKD-WAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 232 ~~~~~~~-~~~~~~-~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
+...... ...+.. ........+++++||+|||||||.||||+++|+++.+.+.+....++++++|++++++|++|.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g 254 (600)
T PRK08279 175 YEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTG 254 (600)
T ss_pred HHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhh
Confidence 0000000 000100 11123346789999999999999999999999999999999888899999999999999999999
Q ss_pred hHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCC
Q psy14338 310 LWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWS 389 (1761)
Q Consensus 310 ~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~ 389 (1761)
+...++.+|..|+++++.+ .+++..+++.++++++|++.++| +++..++...........++|.+ + |++++
T Consensus 255 ~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~p-~l~~~l~~~~~~~~~~~~~l~~~--~--g~~l~ 325 (600)
T PRK08279 255 GTVAWSSVLAAGATLALRR----KFSASRFWDDVRRYRATAFQYIG-ELCRYLLNQPPKPTDRDHRLRLM--I--GNGLR 325 (600)
T ss_pred HHHHHHHHHhcCcEEEEcC----CCCHHHHHHHHHHhcceEEeehH-HHHHHHHhCCCCccccCcceeEE--e--cCCCC
Confidence 9876677788899988877 78999999999999999999996 57777766543333345677764 3 56689
Q ss_pred HHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCC
Q psy14338 390 LSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQV 469 (1761)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 469 (1761)
++++++|.+.++.. .++|.||+||++...+... ....++|++
T Consensus 326 ~~~~~~~~~~~~~~-----~l~~~YG~tE~~~~~~~~~---------------------------------~~~~~~g~~ 367 (600)
T PRK08279 326 PDIWDEFQQRFGIP-----RILEFYAASEGNVGFINVF---------------------------------NFDGTVGRV 367 (600)
T ss_pred HHHHHHHHHHhCcc-----eeeeeecccccceeecccC---------------------------------CCCcccccc
Confidence 99999999988431 4999999999975433111 012234444
Q ss_pred CC-------------CcEEEEEeCCCCcccCCCCCceEEE--EecCCccccccCCCccccccccccccccCCCccCCCce
Q psy14338 470 MP-------------GCIMTVVKMDSPSYLCKTDEVGEIC--VASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTY 534 (1761)
Q Consensus 470 ~~-------------~~~~~I~d~~~~~~~~p~G~~GEL~--i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~ 534 (1761)
.+ +....|.|.++...+++.|+.|||+ |+|++++.|| ++++.|+++|+.+++.. +++|
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~------~~~~ 440 (600)
T PRK08279 368 PLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKK------GDAW 440 (600)
T ss_pred cccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCC------CCce
Confidence 33 2233445555544468999999998 7899999999 99999999998776643 3789
Q ss_pred EeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC--CCceEEEEEEeC--C
Q psy14338 535 TRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL--RDERICVIAEQR--P 610 (1761)
Q Consensus 535 yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~--~~~~l~a~v~~~--~ 610 (1761)
|+|||+|++++||.++|+||+||+||++|+||+|.|||+.|.+++.| .+|+|+++++. .+...+++++.. .
T Consensus 441 ~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V-----~~a~v~gv~~~~~~~~~~~~~vv~~~~~ 515 (600)
T PRK08279 441 FNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGV-----EEAVVYGVEVPGTDGRAGMAAIVLADGA 515 (600)
T ss_pred EeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCc-----ceEEEEEeecCCCCCccceeEEEecCCc
Confidence 99999999999999999999999999999999999999999998887 79999998743 344445555444 3
Q ss_pred CCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 611 DCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 611 ~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
..+.++++++|+++||.||+|..+ +.+++||+|+|||+||++|++++.+.
T Consensus 516 ~~~~~~l~~~l~~~L~~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 516 EFDLAALAAHLYERLPAYAVPLFV-------RLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred cCCHHHHHHHHHhhCccccCCeEE-------EeecCCCCCcchhhhHHHHhhcCCCc
Confidence 467899999999999999999986 55699999999999999999866543
|
|
| >PLN02736 long-chain acyl-CoA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-61 Score=634.38 Aligned_cols=506 Identities=17% Similarity=0.181 Sum_probs=392.5
Q ss_pred cccccccccccCCCCcCCCCCCCceEEc---cCC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSV---DTR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLI 1238 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~---d~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~i 1238 (1761)
.++++.|...+. ++|+++|+.+. ++. ...+.+||+||+++++++|+.|++. |+++||+|+|+++|+++|+
T Consensus 44 ~tl~~~l~~~a~-----~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~-Gv~~gd~Vai~~~n~~e~~ 117 (651)
T PLN02736 44 GTLHDNFVYAVE-----TFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQH-GIPKGACVGLYFINRPEWL 117 (651)
T ss_pred CCHHHHHHHHHH-----hCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEcCCCHHHH
Confidence 456666666554 78999999542 221 1235699999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----c-ccccc----------
Q psy14338 1239 CAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----N-VVDIK---------- 1303 (1761)
Q Consensus 1239 va~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~-~~~~~---------- 1303 (1761)
++++||+++|+++|||+|.++.+ ++.+++++++++++|++.+....+...... . ++...
T Consensus 118 ~~~lA~~~~G~v~vpl~~~~~~~------~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~ 191 (651)
T PLN02736 118 IVDHACSAYSYVSVPLYDTLGPD------AVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLP 191 (651)
T ss_pred HHHHHHHHcCCeEEEeecCCCHH------HHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhh
Confidence 99999999999999999877766 999999999999999998765544332110 0 00000
Q ss_pred --------cCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEE
Q psy14338 1304 --------SWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIAL 1375 (1761)
Q Consensus 1304 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~ 1375 (1761)
.+.++..... ..........++++|+|+|||||||.||||++||+++++.+.+....+++.++|+++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~ 267 (651)
T PLN02736 192 SGTGVEIVTYSKLLAQGR----SSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHIS 267 (651)
T ss_pred ccCCcEEEEHHHHHHhcc----cCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEE
Confidence 0000000000 0001122356899999999999999999999999999999999888899999999999
Q ss_pred EeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchh--------
Q psy14338 1376 CLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQL-------- 1447 (1761)
Q Consensus 1376 ~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~-------- 1447 (1761)
++|++|.++.. .++.+|+.|+++++.+ .++..+++.|+++++|+++++|+++..+.+.+...+...
T Consensus 268 ~lPl~h~~~~~-~~~~~l~~G~~i~~~~-----~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~ 341 (651)
T PLN02736 268 YLPLAHIYERV-NQIVMLHYGVAVGFYQ-----GDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLF 341 (651)
T ss_pred eCCHHHHHHHH-HHHHHHHcCCEEEEeC-----CCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 99999998884 5788999999998876 378899999999999999999999998865421100000
Q ss_pred -------------hccC-------------CCC-CcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccc
Q psy14338 1448 -------------KARN-------------IAL-GCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNI 1500 (1761)
Q Consensus 1448 -------------~~~~-------------~~l-~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~ 1500 (1761)
.... ..+ ++||.+++||+++++ ++.+++.+.++ ..+++.||+||++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~-~~~~~~~~~~g------~~~~~~YG~TE~~ 414 (651)
T PLN02736 342 NAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSP-DVMEFLRICFG------GRVLEGYGMTETS 414 (651)
T ss_pred HHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCH-HHHHHHHHHhC------CCeEEEechHHhc
Confidence 0000 011 489999999999999 78888877653 4699999999986
Q ss_pred eeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCC---CCCCCcceEEEEcCCc
Q psy14338 1501 AICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKG---QCGDSHLGEIWVQSPH 1577 (1761)
Q Consensus 1501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~---~~p~G~~GEL~i~g~~ 1577 (1761)
+.+..... ...+.+++|+|+||++++|+|.+.+. ...++..|||+|+||+
T Consensus 415 ~~~~~~~~---------------------------~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~ 467 (651)
T PLN02736 415 CVISGMDE---------------------------GDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPI 467 (651)
T ss_pred hheeccCC---------------------------CCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCc
Confidence 54332110 00123469999999999999843222 2233457999999999
Q ss_pred ccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEe-CC
Q psy14338 1578 NASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIML-RG 1656 (1761)
Q Consensus 1578 v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki-~G 1656 (1761)
++.|||| +|+.|++.| ..+|||+|||+|++ |+| |+ |+|+||+||+||+ +|
T Consensus 468 v~~GY~~---~~~~t~~~~--------~~dgw~~TGDlg~~------d~d--------G~----l~i~GR~kd~ik~~~G 518 (651)
T PLN02736 468 IFKGYYK---DEVQTREVI--------DEDGWLHTGDIGLW------LPG--------GR----LKIIDRKKNIFKLAQG 518 (651)
T ss_pred ccccccc---CHHHHHhhh--------ccCCCeeccceEEE------cCC--------Cc----EEEEEechhheEcCCC
Confidence 9999999 999999999 45799999999999 999 99 9999999999997 69
Q ss_pred eecChHHHHHHHHHhccCcceeEEEee--CCeEEEEEEeCCC---------chhHhhHHHHHH-----------------
Q psy14338 1657 MRYHPIDIENSVMRAHKKIAECAVFTW--TNLLVVVVELDGN---------ESEALDLVPLVT----------------- 1708 (1761)
Q Consensus 1657 ~rI~~~eIE~~~l~~~p~V~~a~Vv~~--~~~~~a~v~~~~~---------~~~~~~l~~~l~----------------- 1708 (1761)
+||+|.|||+ +|..||.|.+|+|++. ++.++|+|+++.. ..+..++.++++
T Consensus 519 ~~V~p~eIE~-~l~~~p~V~~a~V~g~~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 597 (651)
T PLN02736 519 EYIAPEKIEN-VYAKCKFVAQCFVYGDSLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGR 597 (651)
T ss_pred cEechHHHHH-HHhcCCCeeEEEEEecCCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999 8999999999999984 4688999987532 122233443332
Q ss_pred HHHhhhcCceeeEEEEECCCCcc------CCCchhhhHHHHHHHHHcCCCChhhhh
Q psy14338 1709 NAVLEEHHLIVGVAVVVDPGVVP------INSRGEKQRMHLRDGFLADQLDPIYVA 1758 (1761)
Q Consensus 1709 ~~~Lp~~~~vP~~i~~v~~~~lP------~t~~GKvdR~~L~~~~~~~~~~~~~~~ 1758 (1761)
+..|+ .|++|+.|++++ +.| +|++||++|++|++.| ..+++++|..
T Consensus 598 ~~~l~-~~~~~~~~~~~~--~~~~~~~~~lT~~~Ki~R~~i~~~~-~~~i~~~y~~ 649 (651)
T PLN02736 598 EAQLR-GFEFAKAVTLVP--EPFTVENGLLTPTFKVKRPQAKAYF-AKAISDMYAE 649 (651)
T ss_pred hcCCC-cceeeeEEEEeC--CCCcCCCCcCChhhhhhHHHHHHHH-HHHHHHHHhh
Confidence 22387 999999999999 775 7999999999999999 5678888864
|
|
| >PRK07514 malonyl-CoA synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-60 Score=611.80 Aligned_cols=490 Identities=20% Similarity=0.291 Sum_probs=408.1
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+|.+++.+++ .+|+++|+...++ +.+||+||.++++++|++|+ +.|+++|++|+++++|+ .++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~~~-----~~~Ty~eL~~~~~~la~~L~--------~~g~~~gd~v~i~~~~~--~e~ 66 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETPDG-----LRYTYGDLDAASARLANLLV--------ALGVKPGDRVAVQVEKS--PEA 66 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeCCC-----CEEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHH
Confidence 56888999999 9999999987543 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----cceeccCCCcceeEEec
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----EVVAFKGWPKLTWFVTE 236 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 236 (1761)
++++||++++|+++||+++.++.+ ++..+++.++++++|+++...+.+...... .+...+......+ .+
T Consensus 67 ~v~~la~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 139 (504)
T PRK07514 67 LALYLATLRAGAVFLPLNTAYTLA-----ELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSL--LE 139 (504)
T ss_pred HHHHHHHHHcCcEEEECCCCCCHH-----HHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccH--HH
Confidence 999999999999999999999876 899999999999999987755433221110 0111111000000 00
Q ss_pred cccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHH
Q psy14338 237 HLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLT 316 (1761)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~ 316 (1761)
.....+ .........+++++||+|||||||.||||+++|+++.+.+......+++.++|++++.+|++|..++...++.
T Consensus 140 ~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 218 (504)
T PRK07514 140 AAAAAP-DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNV 218 (504)
T ss_pred hhhhcC-cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHH
Confidence 000111 1111234568999999999999999999999999999999888888999999999999999999988766889
Q ss_pred HHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHH
Q psy14338 317 SVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQF 396 (1761)
Q Consensus 317 ~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~ 396 (1761)
+++.|+++++.+ ..++..+++.+. ++|++..+| .++..++.........++++|.+++| |+++++++.+.|
T Consensus 219 ~l~~G~~~~~~~----~~~~~~~~~~i~--~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~g--g~~~~~~~~~~~ 289 (504)
T PRK07514 219 ALLAGASMIFLP----KFDPDAVLALMP--RATVMMGVP-TFYTRLLQEPRLTREAAAHMRLFISG--SAPLLAETHREF 289 (504)
T ss_pred HHhcCcEEEECC----CCCHHHHHHHHH--hheeeecHH-HHHHHHHcCCCCCcccccceeeEEec--CCCCCHHHHHHH
Confidence 999999999988 678999999994 799999996 47777777665556678899999999 999999999999
Q ss_pred HHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEE
Q psy14338 397 LSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMT 476 (1761)
Q Consensus 397 ~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 476 (1761)
.+.+ +.+ ++|.||+||++..++.... ......++|+|+++++++
T Consensus 290 ~~~~---~~~---~~~~YG~tE~~~~~~~~~~------------------------------~~~~~~~~G~~~~~~~v~ 333 (504)
T PRK07514 290 QERT---GHA---ILERYGMTETNMNTSNPYD------------------------------GERRAGTVGFPLPGVSLR 333 (504)
T ss_pred HHHh---CCc---ceeecccccccccccCCcc------------------------------ccccCcccccCCCCcEEE
Confidence 9987 443 9999999999765432110 012346899999999999
Q ss_pred EEe-CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEecc
Q psy14338 477 VVK-MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSR 555 (1761)
Q Consensus 477 I~d-~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~ 555 (1761)
|+| ++++ ++|.|+.|||+|+|++++.||+++|+.+++.|. .++||+|||+|+++++|.++|+||+
T Consensus 334 i~d~~~~~--~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~------------~~~~~~TGDl~~~~~~g~~~~~GR~ 399 (504)
T PRK07514 334 VTDPETGA--ELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFR------------ADGFFITGDLGKIDERGYVHIVGRG 399 (504)
T ss_pred EEECCCCC--CCCCCCceEEEEecCCccccccCCchhhhhhcc------------cCCCeeecceEEEcCCccEEEeccc
Confidence 999 5554 699999999999999999999999999999995 3679999999999999999999999
Q ss_pred CCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcc
Q psy14338 556 DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIH 632 (1761)
Q Consensus 556 d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~ 632 (1761)
||+||++|++|+|.|||+++.+++++ .+++|++.++ ..++.++++++..+. .+.++++++++++|+.||+|.
T Consensus 400 ~~~i~~~G~~i~~~~IE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~ 474 (504)
T PRK07514 400 KDLIISGGYNVYPKEVEGEIDELPGV-----VESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALKGRLARFKQPK 474 (504)
T ss_pred cceEEeCCeEECHHHHHHHHHhCCCe-----eEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHHhhcccCCCCc
Confidence 99999999999999999999998887 7999999875 356788999887653 467899999999999999999
Q ss_pred eeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 633 QVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 633 ~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
.+ +.++++|+|++||++|++|++.+.
T Consensus 475 ~i-------~~v~~~p~t~~gK~~r~~l~~~~~ 500 (504)
T PRK07514 475 RV-------FFVDELPRNTMGKVQKNLLREQYA 500 (504)
T ss_pred EE-------EEeccCCCCCCcceeHHHHHHHHH
Confidence 86 556999999999999999998865
|
|
| >PRK13388 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-59 Score=611.77 Aligned_cols=484 Identities=17% Similarity=0.189 Sum_probs=388.7
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCC-CCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSL-KSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv-~~g~~V~l~~~~s~~~~ 159 (1761)
.++.++|.+++ .|+++|+++.+ ..+||+||.++++++|..|. +.|+ ++|++|+++++|+ ++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~------~~lTy~el~~~~~~la~~L~--------~~g~~~~~~~V~i~~~n~--~~ 64 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGD------RTWTWREVLAEAAARAAALI--------ALADPDRPLHVGVLLGNT--PE 64 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECC------ceeeHHHHHHHHHHHHHHHH--------HhcCCCCCCEEEEECCCC--cH
Confidence 56888888765 69999998754 58999999999999999999 8899 8999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc--cccceeccCCCcceeEEecc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA--AGEVVAFKGWPKLTWFVTEH 237 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (1761)
+++++|||+++|+++||+||.++.+ ++.+++++++++++|+++.....+.... ....+.... ..+ .+.
T Consensus 65 ~v~~~lA~~~~Ga~~v~l~p~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~---~~~--~~~ 134 (540)
T PRK13388 65 MLFWLAAAALGGYVLVGLNTTRRGA-----ALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDT---PAY--AEL 134 (540)
T ss_pred HHHHHHHHHhCCCEEEEecccCChH-----HHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccc---hhh--hhh
Confidence 9999999999999999999999876 8999999999999999876544332211 001111110 000 011
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTS 317 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~ 317 (1761)
.... ....+.....++++++|+|||||||+||||+++|+++.+.+......+++.++|+++.++|++|..+++..++.+
T Consensus 135 ~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~ 213 (540)
T PRK13388 135 VAAA-GALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPA 213 (540)
T ss_pred hccc-cCcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHH
Confidence 1100 111122235689999999999999999999999999999888888899999999999999999999987645568
Q ss_pred HhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHH
Q psy14338 318 VLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFL 397 (1761)
Q Consensus 318 L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~ 397 (1761)
|..|+++++.+ .+++..+++.|+++++|++..+|. .+..++..+........++|.+ + |++++++..++|.
T Consensus 214 l~~G~~~v~~~----~~~~~~~~~~i~~~~vt~~~~~p~-~l~~l~~~~~~~~~~~~~l~~~-~---G~~~~~~~~~~~~ 284 (540)
T PRK13388 214 VASGAAVALPA----KFSASGFLDDVRRYGATYFNYVGK-PLAYILATPERPDDADNPLRVA-F---GNEASPRDIAEFS 284 (540)
T ss_pred HHcCcEEEECC----CCCHHHHHHHHHHhCCeEEEehHH-HHHHHHhCCCCccccccceEEE-E---CCCCCHHHHHHHH
Confidence 99999999877 678999999999999999999864 6666665443322223467643 3 3456788889998
Q ss_pred HHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEE-
Q psy14338 398 SVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMT- 476 (1761)
Q Consensus 398 ~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~- 476 (1761)
+.+ |.+ ++|.||+||++.+++..+ .....++|+|++|++++
T Consensus 285 ~~~---~~~---l~~~YG~tE~~~~~~~~~--------------------------------~~~~~~vG~p~~g~~i~~ 326 (540)
T PRK13388 285 RRF---GCQ---VEDGYGSSEGAVIVVREP--------------------------------GTPPGSIGRGAPGVAIYN 326 (540)
T ss_pred HHh---CCc---eecccccccccceeecCC--------------------------------CCCCCCCCCCCCCcEEEc
Confidence 887 443 999999999986654322 01246899999997653
Q ss_pred ----------EEeCCCCcccCCCCCceEEEEe-cCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC
Q psy14338 477 ----------VVKMDSPSYLCKTDEVGEICVA-STGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545 (1761)
Q Consensus 477 ----------I~d~~~~~~~~p~G~~GEL~i~-G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~ 545 (1761)
++|++|+. ..+.|++|||+++ |++++.||+|+|+.|+++|. ++||+|||+|++++
T Consensus 327 ~~~~~~~~~~~~d~~g~~-~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~-------------~g~~~TGD~~~~~~ 392 (540)
T PRK13388 327 PETLTECAVARFDAHGAL-LNADEAIGELVNTAGAGFFEGYYNNPEATAERMR-------------HGMYWSGDLAYRDA 392 (540)
T ss_pred CCCCccccceeccCcccc-ccCCCcceEEEEecCCcccccccCChHHHHHHhh-------------cCceeccceEEEcC
Confidence 44555542 2256789999998 99999999999999999984 68999999999999
Q ss_pred CCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHH
Q psy14338 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMS 622 (1761)
Q Consensus 546 dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~ 622 (1761)
||+++|+||+||+||++|++|+|.|||+.+.+++.| .+|+|+++++ ..++.++++++..++ .+.++++++++
T Consensus 393 dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V-----~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~l~ 467 (540)
T PRK13388 393 DGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAI-----NRVAVYAVPDERVGDQVMAALVLRDGATFDPDAFAAFLA 467 (540)
T ss_pred CCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCc-----eEEEEEEccCCCCCceeEEEEEECCCCcCCHHHHHHHHH
Confidence 999999999999999999999999999999998887 7999999985 356777777776554 56789999998
Q ss_pred HH--HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 623 RV--LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 623 ~~--Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.+ |+.||+|..+ +.+++||+|++||++|++|++....
T Consensus 468 ~~~~l~~~~~P~~~-------~~v~~iP~t~~GKv~R~~L~~~~~~ 506 (540)
T PRK13388 468 AQPDLGTKAWPRYV-------RIAADLPSTATNKVLKRELIAQGWA 506 (540)
T ss_pred hhccCCcccCCcEE-------EEeccCCCCCcceeeHHhHHHhccC
Confidence 65 9999999986 4459999999999999999987643
|
|
| >PRK12583 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-59 Score=613.98 Aligned_cols=504 Identities=18% Similarity=0.256 Sum_probs=412.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..+++++|.+.++++|+++|+++.+.+ +.+||+||.++++++|++|+ +.|+++|++|+++++|+ ++
T Consensus 17 ~~~l~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~~l~~~~~~~a~~L~--------~~gi~~g~~V~i~~~~~--~~ 82 (558)
T PRK12583 17 TQTIGDAFDATVARFPDREALVVRHQA----LRYTWRQLADAVDRLARGLL--------ALGVQPGDRVGIWAPNC--AE 82 (558)
T ss_pred cCcHHHHHHHHHHHCCCCeEEEecCCC----cEecHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCC--hH
Confidence 357999999999999999999886532 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc-----Ccccccc------cceeccCCC
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG-----LPKTAAG------EVVAFKGWP 228 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~-----~~~~~~~------~~~~~~~~~ 228 (1761)
+++++|||+++|++++|++|.++.+ ++.+++++++++++|+++..... +...... ..+.....+
T Consensus 83 ~~~~~~a~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (558)
T PRK12583 83 WLLTQFATARIGAILVNINPAYRAS-----ELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLP 157 (558)
T ss_pred HHHHHHHHHhhCCEEEecCCCCCHH-----HHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCC
Confidence 9999999999999999999999876 89999999999999997653210 0000000 000000000
Q ss_pred cceeEE-------------eccccCCC-----CCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc
Q psy14338 229 KLTWFV-------------TEHLAKTP-----KDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC 290 (1761)
Q Consensus 229 ~~~~~~-------------~~~~~~~~-----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 290 (1761)
...... .+...... ..........+++++|++|||||||.||||+++|+++.+.+......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~ 237 (558)
T PRK12583 158 ELRGVVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL 237 (558)
T ss_pred cceEEEEecCCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh
Confidence 000000 00000000 000011234678999999999999999999999999999988888889
Q ss_pred CCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCC
Q psy14338 291 HYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKD 370 (1761)
Q Consensus 291 ~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~ 370 (1761)
++.++|+++...|++|.++.+..++.++..|++++++.. .+++..+++.++++++|+++.+|+ ++..++.......
T Consensus 238 ~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~-~~~~l~~~~~~~~ 313 (558)
T PRK12583 238 GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNE---AFDPLATLQAVEEERCTALYGVPT-MFIAELDHPQRGN 313 (558)
T ss_pred CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecC---CCCHHHHHHHHHHcCCeEEeccHH-HHHHHHccccccC
Confidence 999999999999999999988778999999999998653 578999999999999999999974 7666666554445
Q ss_pred CCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCccccee
Q psy14338 371 ISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVV 450 (1761)
Q Consensus 371 ~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 450 (1761)
.++++||.+++| |+++++++.++|.+.++. . .+++.||+||++.+++.....
T Consensus 314 ~~~~~lr~i~~~--G~~~~~~~~~~~~~~~~~---~--~i~~~YG~tE~~~~~~~~~~~--------------------- 365 (558)
T PRK12583 314 FDLSSLRTGIMA--GAPCPIEVMRRVMDEMHM---A--EVQIAYGMTETSPVSLQTTAA--------------------- 365 (558)
T ss_pred CCchhheEEEec--CCCCCHHHHHHHHHHcCC---c--ceeccccccccccceeccCcc---------------------
Confidence 678999999999 999999999999998842 1 499999999998766543211
Q ss_pred eecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccC
Q psy14338 451 RVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALS 530 (1761)
Q Consensus 451 ~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~ 530 (1761)
........++|+|++++.++|+|+++. +++.|+.|||+|+|+.++.||+|+++.+.+.|.
T Consensus 366 ------~~~~~~~~~vG~p~~~~~~~i~d~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~------------ 425 (558)
T PRK12583 366 ------DDLERRVETVGRTQPHLEVKVVDPDGA--TVPRGEIGELCTRGYSVMKGYWNNPEATAESID------------ 425 (558)
T ss_pred ------cccccccCCCCccCCCCeEEEECCCCC--CCCCCCeeEEEEEeCccchhhcCChHHHHhhcC------------
Confidence 001123578999999999999999975 699999999999999999999999999988873
Q ss_pred CCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeC
Q psy14338 531 QDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQR 609 (1761)
Q Consensus 531 ~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~ 609 (1761)
.++||+|||+|++++||+++|.||+|++||++|++|+|.|||+.+..++.+ .+++|+++++. .++.++++++..
T Consensus 426 ~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~ 500 (558)
T PRK12583 426 EDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAV-----ADVQVFGVPDEKYGEEIVAWVRLH 500 (558)
T ss_pred CCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCe-----eEEEEEeeecCCCCcEEEEEEEEC
Confidence 378999999999999999999999999999999999999999999998877 79999999854 567889998876
Q ss_pred CC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 610 PD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 610 ~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++ .+.++++++++++||.|++|..+ +.+++||+|++||++|++|+++..+
T Consensus 501 ~~~~~~~~~i~~~~~~~L~~~~~P~~i-------~~v~~lP~t~sGK~~r~~L~~~~~~ 552 (558)
T PRK12583 501 PGHAASEEELREFCKARIAHFKVPRYF-------RFVDEFPMTVTGKVQKFRMREISIE 552 (558)
T ss_pred CCCCCCHHHHHHHHHhhcccCcCCcEE-------EEeccCCCCCCCCccHHHHHHHHHh
Confidence 53 56789999999999999999986 5569999999999999999988643
|
|
| >PRK05620 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-60 Score=618.82 Aligned_cols=525 Identities=16% Similarity=0.170 Sum_probs=411.7
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCcccc-CCCCCCCEEEEEccCCCch
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSE-SSLKSGDRIALVYPNNDPI 158 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~-~Gv~~g~~V~l~~~~s~~~ 158 (1761)
+.++.++|++.+..+|+++|+.+.+. +. +.+||+||.++++++|++|+ + .|+++|++|+++++|+ .
T Consensus 9 ~~~~~~~l~~~a~~~~~~~a~~~~~~-~~--~~~Ty~el~~~~~~la~~L~--------~~~g~~~gd~V~~~~~n~--~ 75 (576)
T PRK05620 9 PLSLTRILEYGSTVHGDTTVTTWGGA-EQ--EQTTFAAIGARAAALAHALH--------DELGITGDQRVGSMMYNC--A 75 (576)
T ss_pred CCcHHHHHHHHHHhCCCceEEEEcCC-ce--EEEeHHHHHHHHHHHHHHHH--------HhcCCCCCCEEEEEeCCC--H
Confidence 45799999999999999999986432 22 68999999999999999998 5 6899999999999999 9
Q ss_pred hHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCc----
Q psy14338 159 NFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPK---- 229 (1761)
Q Consensus 159 ~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~---- 229 (1761)
++++++|||+++|++++|++|.++.+ ++.++++.++++++|+++...+.+..... ..++.......
T Consensus 76 e~~~~~lA~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 150 (576)
T PRK05620 76 EHLEVLFAVACMGAVFNPLNKQLMND-----QIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAA 150 (576)
T ss_pred HHHHHHHHHHhcCCEEeecccccCHH-----HHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccch
Confidence 99999999999999999999999876 89999999999999998765443322110 00111110000
Q ss_pred ------ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHH--HHHcCCCCCCeEEEc
Q psy14338 230 ------LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRAL--TQACHYTEGENMVCV 301 (1761)
Q Consensus 230 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~--~~~~~~~~~d~~l~~ 301 (1761)
......+.+..............++++++++|||||||+||||+++|+++....... ...+++.+++++++.
T Consensus 151 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 230 (576)
T PRK05620 151 AHMPEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCC 230 (576)
T ss_pred hccccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEe
Confidence 000000000011111111234567999999999999999999999999986654432 345788999999999
Q ss_pred cCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEe
Q psy14338 302 LDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLV 381 (1761)
Q Consensus 302 ~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~ 381 (1761)
+|++|++++.. .+.++..|+++++.+. .+++..+++.|+++++|++..+|+ ++..++........+..+||.+++
T Consensus 231 ~pl~h~~g~~~-~~~~l~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~l~~~~~ 305 (576)
T PRK05620 231 VPIYHVLSWGV-PLAAFMSGTPLVFPGP---DLSAPTLAKIIATAMPRVAHGVPT-LWIQLMVHYLKNPPERMSLQEIYV 305 (576)
T ss_pred CChHHhhhhHH-HHHHHhcCceEEecCC---CCCHHHHHHHHHHhcCceeeecCH-HHHHHHHHhhccCcccCceeEEEE
Confidence 99999999885 8999999999999874 568999999999999999999975 666555432222334468999999
Q ss_pred cCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcc
Q psy14338 382 GDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSL 461 (1761)
Q Consensus 382 gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1761)
| |+++++.+.++|.+.+ |++ +++.||+||++..++........ .......
T Consensus 306 g--G~~~~~~~~~~~~~~~---~~~---~~~~YG~tE~~~~~~~~~~~~~~----------------------~~~~~~~ 355 (576)
T PRK05620 306 G--GSAVPPILIKAWEERY---GVD---VVHVWGMTETSPVGTVARPPSGV----------------------SGEARWA 355 (576)
T ss_pred c--CCCCCHHHHHHHHHHh---CCc---eeeeccccccccceeeeccCCcc----------------------ccccccc
Confidence 9 9999999999999887 544 99999999998655432210000 0000001
Q ss_pred cccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccc----cccccccccccCCCccCCCceEee
Q psy14338 462 TLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLS----NTTFKVTPLLADGTALSQDTYTRS 537 (1761)
Q Consensus 462 ~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T----~~~f~~~p~~~~g~~~~~~~~yrT 537 (1761)
...++|++.++++++|+|+ +.....+.|..|||+|+|+++++|||++|+.| +..|..+++.........++||+|
T Consensus 356 ~~~~~G~~~~~~~~~i~~~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~T 434 (576)
T PRK05620 356 YRVSQGRFPASLEYRIVND-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRT 434 (576)
T ss_pred cccccCCcCCceeEEEecC-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEec
Confidence 1347899999999999997 65322346789999999999999999999999 888988876532222234789999
Q ss_pred cceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC-----
Q psy14338 538 GLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD----- 611 (1761)
Q Consensus 538 GDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~----- 611 (1761)
||+|++++||.++|+||+||+||++|++|++.|||+.|.+++.+ .+++|++.++. .++.++++++..++
T Consensus 435 GD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v-----~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~ 509 (576)
T PRK05620 435 GDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEV-----VECAVIGYPDDKWGERPLAVTVLAPGIEPTR 509 (576)
T ss_pred CceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCc-----eEEEEEeccCCCcCceeEEEEEecCCCCccc
Confidence 99999999999999999999999999999999999999998887 79999998854 57788888876554
Q ss_pred CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCC
Q psy14338 612 CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLH 670 (1761)
Q Consensus 612 ~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~ 670 (1761)
.+.++++++|+++||.|++|..| +.+++||+|++||+||++|++.+.++++.
T Consensus 510 ~~~~~l~~~l~~~L~~~~~P~~i-------~~v~~~P~t~~GKv~r~~L~~~~~~~~~~ 561 (576)
T PRK05620 510 ETAERLRDQLRDRLPNWMLPEYW-------TFVDEIDKTSVGKFDKKDLRQHLADGDFE 561 (576)
T ss_pred ccHHHHHHHHHhhCccccCCeEE-------EEeccCCCCCcccCcHHHHHHHHhcCCcc
Confidence 34689999999999999999986 55699999999999999999999886544
|
|
| >PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-59 Score=608.21 Aligned_cols=501 Identities=21% Similarity=0.241 Sum_probs=378.0
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
+++|+++|++..+. ...+++||+||.++++++|+.|.++ ++||+|+|+++|++++++++|||+++|++++ ++|..
T Consensus 13 ~~~~~~~a~~~~~~-~~~~~~ty~el~~~~~~lA~~L~~~---~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~-~~~~~ 87 (525)
T PRK05851 13 TASGRDLVVLDRES-GLWRRHPWPEVHGRAENVAARLLDR---DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS-ILPGP 87 (525)
T ss_pred cCCCCceEEeCCCC-CcceeecHHHHHHHHHHHHHHHHhc---CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-CCCCC
Confidence 47899999984322 2248999999999999999999875 6999999999999999999999999999875 44432
Q ss_pred --CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEe
Q psy14338 1259 --PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDF 1336 (1761)
Q Consensus 1259 --P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~ 1336 (1761)
+.+.....+++.+++++++++++|++......+...... +....+... .. . ..........++++|||+|
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~---~~-~--~~~~~~~~~~~~d~a~i~~ 159 (525)
T PRK05851 88 VRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS--VTVHDLATA---AH-T--NRSASLTPPDSGGPAVLQG 159 (525)
T ss_pred CCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc--ccccccccc---cc-c--cccccCCCCCCCCeEEEEe
Confidence 111112334666789999999999998765544332111 111111000 00 0 0000112346789999999
Q ss_pred ccCCCCCCceEEccHHHHHHHHHHHHHHcCcC-CCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHH
Q psy14338 1337 SVSTTGMLAGIKMSHAAVTSLCRSMKLACELY-PSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWL 1415 (1761)
Q Consensus 1337 TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~ 1415 (1761)
||||||.||||+++|+++.+.+.+....+++. ++|+++.++|++|++++ ..++.+++.|+++++.+...+..++..++
T Consensus 160 TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~ 238 (525)
T PRK05851 160 TAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGL-AFLLTAALAGAPLWLAPTTAFSASPFRWL 238 (525)
T ss_pred CCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccH-HHHHHHHHcCCeEEEcCHHHHHHCHHHHH
Confidence 99999999999999999999999999899998 88999999999999998 56889999999999977422223788999
Q ss_pred HHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccccccc
Q psy14338 1416 SAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFG 1495 (1761)
Q Consensus 1416 ~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG 1495 (1761)
+.++++++|++..+|.++..+.+.. ......++++||.+++||+++++ .+.++|.+.+...|.....+++.||
T Consensus 239 ~~i~~~~~t~~~~p~~~~~~l~~~~------~~~~~~~l~~lr~~~~gG~~l~~-~~~~~~~~~~~~~g~~~~~~~~~YG 311 (525)
T PRK05851 239 SWLSDSRATLTAAPNFAYNLIGKYA------RRVSDVDLGALRVALNGGEPVDC-DGFERFATAMAPFGFDAGAAAPSYG 311 (525)
T ss_pred HHHHHhCCeEEeCCcHHHHHHHHhh------ccccCCCHHHhheeEeccccCCH-HHHHHHHHHHhhcCCChhhcccccc
Confidence 9999999998866665555553311 01134567899999999999999 7888888776666665567999999
Q ss_pred ccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcC
Q psy14338 1496 CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQS 1575 (1761)
Q Consensus 1496 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g 1575 (1761)
+||++..+......... ... ... ..+.....+..++|+|++|++++|+|++++.++|.|+.|||+|+|
T Consensus 312 ~TE~~~~~~~~~~~~~~-~~~----~~~-------~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g 379 (525)
T PRK05851 312 LAESTCAVTVPVPGIGL-RVD----EVT-------TDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRG 379 (525)
T ss_pred hhhhceEEEecCCCCCc-eee----eec-------cccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEec
Confidence 99987655432211000 000 000 000001123457999999999999998766689999999999999
Q ss_pred CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeC
Q psy14338 1576 PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLR 1655 (1761)
Q Consensus 1576 ~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~ 1655 (1761)
+++++|||| +|+.+ .++||+|||+|++ + | |+ |+|+||+||+||++
T Consensus 380 ~~~~~GY~~---~~~~~-------------~~~~~~TGDl~~~------~-~--------G~----l~~~GR~dd~i~~~ 424 (525)
T PRK05851 380 ASMMSGYLG---QAPID-------------PDDWFPTGDLGYL------V-D--------GG----LVVCGRAKELITVA 424 (525)
T ss_pred Cchhhcccc---CCccC-------------CCCceeccceEEE------E-C--------CE----EEEEeecCCEEEEC
Confidence 999999999 87532 3579999999988 6 7 88 99999999999999
Q ss_pred CeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCCchhHhhHHHHHHHHHhhhcC--ceeeEEEEECCC
Q psy14338 1656 GMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHH--LIVGVAVVVDPG 1728 (1761)
Q Consensus 1656 G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~--~vP~~i~~v~~~ 1728 (1761)
|+||+|.|||+ +|.+||+|.+|+|++.+ +.+.++|.......+.++++++++++ |+ .| |+|..+++++.+
T Consensus 425 G~~v~p~eIE~-~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-l~-~~l~~~P~~~~~v~~~ 501 (525)
T PRK05851 425 GRNIFPTEIER-VAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGPDEAGARSEVVQR-VA-SECGVVPSDVVFVAPG 501 (525)
T ss_pred CEEeCHHHHHH-HHHhCCCcccceEEEEEecCCCCceeEEEEEEecCcchHHHHHHHHHH-HH-HHhCCCccEEEEECCC
Confidence 99999999999 89999999999998743 34555555432234556788888887 77 66 999999999855
Q ss_pred CccCCCchhhhHHHHHHHHHcC
Q psy14338 1729 VVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1729 ~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
+||+|++||++|++|++.+.++
T Consensus 502 ~lP~t~~GKi~r~~L~~~~~~~ 523 (525)
T PRK05851 502 SLPRTSSGKLRRLAVKRSLEAA 523 (525)
T ss_pred CcCcCcchHHHHHHHHHHHHhc
Confidence 7999999999999999988553
|
|
| >PRK07656 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-60 Score=612.56 Aligned_cols=497 Identities=20% Similarity=0.231 Sum_probs=413.0
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.+.|++++..+|+++|+.+.+ +++||+||.++++++|+.|. +.|+++|++|+++++|+ ++
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~--------~~gv~~g~~V~l~~~~~--~~ 67 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVFGD------QRLTYAELNARVRRAAAALA--------ALGIGKGDRVAIWAPNS--PH 67 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEeCC------CceeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--hH
Confidence 3679999999999999999999855 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc----c-ccceeccCCCcce---
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA----A-GEVVAFKGWPKLT--- 231 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~----~-~~~~~~~~~~~~~--- 231 (1761)
+++++|||+++|++++|++|.++.+ ++..++++++++++++++.......... . ..++.........
T Consensus 68 ~~~~~la~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (513)
T PRK07656 68 WVIAALGALKAGAVVVPLNTRYTAD-----EAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTE 142 (513)
T ss_pred HHHHHHHHHhcCeEEEecCcccCHH-----HHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCcc
Confidence 9999999999999999999999976 8999999999999999876543221110 0 0011100000000
Q ss_pred -eEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhh
Q psy14338 232 -WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
....+.+..............+++++||+|||||||.||||.++|+++.+.+......+++.+++++++++|++|++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
T PRK07656 143 KMKTFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGY 222 (513)
T ss_pred ccccHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHH
Confidence 0000000011111112334578999999999999999999999999999999888889999999999999999999998
Q ss_pred HHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCH
Q psy14338 311 WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSL 390 (1761)
Q Consensus 311 ~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~ 390 (1761)
+..++.+|+.|+++++.+ ..++..+++.|+++++|++..+| .++..++.........++++|.+++| |+++++
T Consensus 223 ~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p-~~~~~l~~~~~~~~~~~~~l~~v~~~--g~~~~~ 295 (513)
T PRK07656 223 KAGVNAPLMRGATILPLP----VFDPDEVFRLIETERITVLPGPP-TMYNSLLQHPDRSAEDLSSLRLAVTG--AASMPV 295 (513)
T ss_pred HHHHHHHHHcCceEEecC----cCCHHHHHHHHHHhCCeEEechH-HHHHHHHcCCCcCCCCccceeeEEec--CCCCCH
Confidence 877899999999999876 67899999999999999999986 48888877665555678899999999 999999
Q ss_pred HHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC
Q psy14338 391 SSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM 470 (1761)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 470 (1761)
++.+.|.+.+ |.. .++|.||+||++.+++...... .......++|+|+
T Consensus 296 ~~~~~~~~~~---~~~--~~~~~YG~tE~~~~~~~~~~~~---------------------------~~~~~~~~vG~~~ 343 (513)
T PRK07656 296 ALLERFESEL---GVD--IVLTGYGLSEASGVTTFNRLDD---------------------------DRKTVAGTIGTAI 343 (513)
T ss_pred HHHHHHHHHc---CCC--ceEeEEccccCCCceeecCccc---------------------------cccccCCCccccC
Confidence 9999999988 431 3999999999976655433110 0011256899999
Q ss_pred CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEE
Q psy14338 471 PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVF 550 (1761)
Q Consensus 471 ~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~ 550 (1761)
+|++++|+|++++ ++|.|..|||+|+|+.++.||+++++.|+..|. +++||+|||+|++++||.++
T Consensus 344 ~~~~~~i~d~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~~~~~~tGDl~~~~~~g~~~ 409 (513)
T PRK07656 344 AGVENKIVNELGE--EVPVGEVGELLVRGPNVMKGYYDDPEATAAAID------------ADGWLHTGDLGRLDEEGYLY 409 (513)
T ss_pred CCcEEEEECCCCC--CCCCCCceEEEEEcchhhhhhcCCHHHHhhhhc------------cCCceeccceEEEcCCeeEE
Confidence 9999999999886 589999999999999999999999999988773 37899999999999999999
Q ss_pred EEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCC--CCCHHHHHHHHHHHHHH
Q psy14338 551 VCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRP--DCSEEESFQWMSRVLQA 627 (1761)
Q Consensus 551 ~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~--~~~~~~l~~~l~~~Lp~ 627 (1761)
++||.||+||++|.+|+|.|||+.|.+++++ .+++|++.++ ..++.++++++... +.+.+++++++++.||.
T Consensus 410 ~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i-----~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~ 484 (513)
T PRK07656 410 IVDRKKDMFIVGGFNVYPAEVEEVLYEHPAV-----AEAAVIGVPDERLGEVGKAYVVLKPGAELTEEELIAYCREHLAK 484 (513)
T ss_pred EEecccceEEeCCEEeCHHHHHHHHHhCCCe-----eEEEEEecCCcccCceEEEEEEECCCCCCCHHHHHHHHHhhccc
Confidence 9999999999999999999999999998887 6899998874 45778889988764 46788999999999999
Q ss_pred hhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 628 VDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 628 y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
|++|..+ +.+++||+|++||++|++|++
T Consensus 485 ~~~p~~i-------~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 485 YKVPRSI-------EFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred ccCCCEE-------EEecCCCCCCccceeHHHHhc
Confidence 9999986 455999999999999999874
|
|
| >PTZ00342 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-60 Score=620.51 Aligned_cols=503 Identities=13% Similarity=0.122 Sum_probs=384.0
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCcccc---CCCCCC-----------
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSE---SSLKSG----------- 145 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~---~Gv~~g----------- 145 (1761)
..++.++|.++++++|+++|+...+ .|...+.+||+||.++++++|+.|. + .|+++|
T Consensus 60 ~~~l~~~l~~~~~~~p~~~Al~~~~-~g~~~~~~Ty~el~~~v~~~A~~L~--------~~~~~Gv~~g~~~~~~~~g~~ 130 (746)
T PTZ00342 60 YKHIMKLLLEKYKLNNNKIAIVEHS-CGEPQNYITYGNFFKKVLSFSHSLN--------TYEGKGIPEKKYNEEQNNGKF 130 (746)
T ss_pred cchHHHHHHHHHhhcCCceeEeccC-CCCCceeeeHHHHHHHHHHHHHHHH--------HHhhcCCCcCccccccccccc
Confidence 5789999999999999999998642 2221268999999999999999999 5 489998
Q ss_pred CEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc-----ccc
Q psy14338 146 DRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA-----AGE 220 (1761)
Q Consensus 146 ~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~-----~~~ 220 (1761)
|+|+|+++|+ ++|+++++||+++|++.||+++.++.+ ++.++|+++++++|+++....+.+.... ...
T Consensus 131 d~V~i~~~N~--~ew~~~~lA~~~~Gav~Vpl~~~~~~~-----el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ 203 (746)
T PTZ00342 131 KLLGLYGSNS--INWLVADLACMLSGVTTLVMHSKFSID-----VIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKK 203 (746)
T ss_pred cEEEEEcCCC--HHHHHHHHHHHHcCCeEEEecCCCCHH-----HHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceE
Confidence 9999999999 999999999999999999999999977 8999999999999999866543322111 011
Q ss_pred ceeccCCCcc-------------------e--------------------------e----------------------E
Q psy14338 221 VVAFKGWPKL-------------------T--------------------------W----------------------F 233 (1761)
Q Consensus 221 ~~~~~~~~~~-------------------~--------------------------~----------------------~ 233 (1761)
++.++..... . + .
T Consensus 204 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 283 (746)
T PTZ00342 204 LIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISII 283 (746)
T ss_pred EEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEE
Confidence 2222211000 0 0 0
Q ss_pred EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc--CCCCCCeEEEccCCcchhhhH
Q psy14338 234 VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC--HYTEGENMVCVLDFKRETGLW 311 (1761)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~ 311 (1761)
..+................|+|+|+|+|||||||.|||||+||+|+++.+....... ...+.+++++++|++|.++..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~ 363 (746)
T PTZ00342 284 LFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERV 363 (746)
T ss_pred EHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHH
Confidence 000000000001112345789999999999999999999999999998877654322 233568999999999999987
Q ss_pred HHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC--------CCCC--------------
Q psy14338 312 HSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT--------KDHK-------------- 369 (1761)
Q Consensus 312 ~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~--------~~~~-------------- 369 (1761)
. .+.+++.|+++++.+ . ++..+++.|.++++|+++.+|. ++..+... +...
T Consensus 364 ~-~~~~l~~G~~i~~~~----~-~~~~l~~di~~~~pT~~~~VP~-v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 436 (746)
T PTZ00342 364 I-AYLSFMLGGTINIWS----K-DINYFSKDIYNSKGNILAGVPK-VFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSN 436 (746)
T ss_pred H-HHHHHHcCCEEEEeC----C-CHHHHHHHHHHhCCcEEEchHH-HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh
Confidence 5 788899999999987 3 7899999999999999999974 76666431 1000
Q ss_pred --------------------CCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCC
Q psy14338 370 --------------------DISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGR 429 (1761)
Q Consensus 370 --------------------~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~ 429 (1761)
....++||.+++| |+|+++++.+.|...+ |++ ++++||+||++..++.....
T Consensus 437 ~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sG--Gapl~~~~~~~~~~~~---g~~---i~~gYGlTEt~~~~~~~~~~ 508 (746)
T PTZ00342 437 NNGGFSKFLEGITHISSKIKDKVNPNLEVILNG--GGKLSPKIAEELSVLL---NVN---YYQGYGLTETTGPIFVQHAD 508 (746)
T ss_pred hcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEc--CCCCCHHHHHHHHHhc---CCC---EEEeeccCcccceeeeccCC
Confidence 0012689999999 9999999999999877 654 99999999997655433211
Q ss_pred CCcccCCCccccccCcccceeeecCCCccCcccccccCCCC-CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccC
Q psy14338 430 AGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM-PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWG 508 (1761)
Q Consensus 430 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~ 508 (1761)
....+++|+|+ |+++++|+|.++.. ..+.+..|||+|+||+++.|||+
T Consensus 509 ------------------------------~~~~gsvG~p~~pg~e~ki~d~~~~~-~~~~~~~GEl~vrGp~v~~GY~~ 557 (746)
T PTZ00342 509 ------------------------------DNNTESIGGPISPNTKYKVRTWETYK-ATDTLPKGELLIKSDSIFSGYFL 557 (746)
T ss_pred ------------------------------CCCcccccCcCCCcEEEEEecccccc-cCCCCCceEEEEecCcccccccC
Confidence 12467899998 99999999844321 23455679999999999999999
Q ss_pred CCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE-CCcccChHHHHHHHHhcCCccccccc
Q psy14338 509 LPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV-TGRKHNADDIIATVLAVEPMKFIYRG 587 (1761)
Q Consensus 509 ~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki-~G~rIe~~eIE~~l~~~~~v~~~~~~ 587 (1761)
+|++|+++|. .+|||||||+|++|+||+|+|+||+||+||+ +|++|+|.|||+.+.+++.| .
T Consensus 558 ~pe~T~~~f~------------~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V-----~ 620 (746)
T PTZ00342 558 EKEQTKNAFT------------EDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFI-----N 620 (746)
T ss_pred ChhhhhhhcC------------cCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCc-----c
Confidence 9999999994 4799999999999999999999999999996 59999999999999998877 7
Q ss_pred eEEEEEEecCCCceEEEEEEeCCC----------------CC---HH-----------HHHHHH----H-----HHHHHh
Q psy14338 588 RIAVFSIRVLRDERICVIAEQRPD----------------CS---EE-----------ESFQWM----S-----RVLQAV 628 (1761)
Q Consensus 588 ~a~v~~~~~~~~~~l~a~v~~~~~----------------~~---~~-----------~l~~~l----~-----~~Lp~y 628 (1761)
+|+|++. .....++|+|++... .. .. ++++.+ . ..|+.|
T Consensus 621 ~~~VvG~--~~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 698 (746)
T PTZ00342 621 FCVVYGD--DSMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRY 698 (746)
T ss_pred EEEEEcc--CCccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999985 234478999987531 10 00 112222 1 247788
Q ss_pred hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 629 DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 629 ~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
.++..+.+..-.|-+ +.+ +|++.|+.|+.+.+.|.
T Consensus 699 e~i~~~~l~~~~~t~-~~~-lTpt~KlkR~~v~~~y~ 733 (746)
T PTZ00342 699 NIINDIYLTSKVWDT-NNY-LTPTFKVKRFYVFKDYA 733 (746)
T ss_pred eeeeeEEEecCCCCC-CCc-cChhhhhhHHHHHHHHH
Confidence 888887655544543 443 99999999999998775
|
|
| >PRK10524 prpE propionyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-59 Score=620.39 Aligned_cols=499 Identities=18% Similarity=0.224 Sum_probs=388.5
Q ss_pred CCCCCCCceEEccCC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1179 AGAPVPPGVSSVDTR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
+.+|+++|+++.+.. +..+.+||+||.++++++|+.|++. |+++||+|+++++|++++++++|||+++|++++|++|.
T Consensus 64 ~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~ 142 (629)
T PRK10524 64 AKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSL-GVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGG 142 (629)
T ss_pred ccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCC
Confidence 367999999865421 2457899999999999999999998 99999999999999999999999999999999999998
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhH---------HHHHhhhc------ccccccccc-CCcc--ccCCCCcc---
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNV---------IKLLKSKE------ASNVVDIKS-WPTI--LDTDDMPK--- 1316 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~---------~~~~~~~~------~~~~~~~~~-~~~~--~~~~~~~~--- 1316 (1761)
++.+ ++.+++++++++++|+++.. .+.+.... ...++.... .... ........
T Consensus 143 ~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 216 (629)
T PRK10524 143 FASH------SLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDVDYATL 216 (629)
T ss_pred CCHH------HHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCcccHHHH
Confidence 8877 99999999999999997532 11111110 001111000 0000 00000000
Q ss_pred --c--hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHH-HHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1317 --K--KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSL-CRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1317 --~--~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
. ....+.....+++++||+|||||||+||||+++|++++.. .......+++.++|+++...++.|..+..+.++.
T Consensus 217 ~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 296 (629)
T PRK10524 217 RAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYA 296 (629)
T ss_pred HhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHH
Confidence 0 0000111245789999999999999999999999997543 4445566788898998888888888887677899
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+|+.|+++++.+......++..+++.|+++++|+++++|++++.+.+... ......++++||.+++|||++++ .
T Consensus 297 ~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-----~~~~~~~l~~lr~i~~~Ge~l~~-~ 370 (629)
T PRK10524 297 PLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDP-----ALLRKHDLSSLRALFLAGEPLDE-P 370 (629)
T ss_pred HHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCc-----ccccccChhheeEEEEeCCCCCH-H
Confidence 99999999998754345689999999999999999999999998865310 01234568899999999999999 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+.++ ..+++.||+||++..+.......+ ....+.+++|+|++|++
T Consensus 371 ~~~~~~~~~~------~~v~~~YG~TE~~~~~~~~~~~~~-----------------------~~~~~~~~~G~p~~g~~ 421 (629)
T PRK10524 371 TASWISEALG------VPVIDNYWQTETGWPILAIARGVE-----------------------DRPTRLGSPGVPMYGYN 421 (629)
T ss_pred HHHHHHHhcC------CCeEeccccccccchhhcCCCCcc-----------------------cCcCCCCCcccCcCCce
Confidence 7777777664 579999999998632211111000 00012346999999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcCC---cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQSP---HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g~---~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
++|+|+++++++|.|+.|||+|+|| +++.|||+ +++.+.+.|... .+++||+|||+|++ |+|
T Consensus 422 ~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~TGDl~~~------d~d- 486 (629)
T PRK10524 422 VKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWG---DDDRFVKTYWSL-----FGRQVYSTFDWGIR------DAD- 486 (629)
T ss_pred EEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccC---ChHHHHHhhhcc-----CCCcEEEcCCcEEE------cCC-
Confidence 9999974689999999999999998 68899999 887776655322 24689999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc------
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE------ 1697 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~------ 1697 (1761)
|+ ++|+||.||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+.....
T Consensus 487 -------G~----l~i~GR~dd~i~~~G~ri~p~eIE~-~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~ 554 (629)
T PRK10524 487 -------GY----YFILGRTDDVINVAGHRLGTREIEE-SISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADRE 554 (629)
T ss_pred -------Cc----EEEEEEecCeEEeCCEEeCHHHHHH-HHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCcccccc
Confidence 99 9999999999999999999999999 8999999999999974 45788888865321
Q ss_pred ---hhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1698 ---SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1698 ---~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
...++|+++++++ |+ .|++|..|++++ +||+|+|||++|++|++.+...
T Consensus 555 ~~~~~~~~i~~~~~~~-l~-~~~~P~~i~~v~--~lP~T~sGKi~R~~L~~~~~~~ 606 (629)
T PRK10524 555 ARLALEKEIMALVDSQ-LG-AVARPARVWFVS--ALPKTRSGKLLRRAIQAIAEGR 606 (629)
T ss_pred chHHHHHHHHHHHHhh-cC-CCcCCCEEEEcC--CCCCCCCcchHHHHHHHHHcCC
Confidence 1246789999987 88 999999999999 9999999999999999987543
|
|
| >TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-60 Score=611.83 Aligned_cols=491 Identities=18% Similarity=0.207 Sum_probs=403.9
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|+++++++|+++|+++.+ +++||+||.++++++|..|+ +.|+++|++|+++++|+ .+
T Consensus 22 ~~~l~~~~~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~--------~~g~~~g~~V~i~~~~~--~~ 85 (527)
T TIGR02275 22 DKPLTDILRDQAARYPDAIAIICGN------RQWSYRELDQRADNLAAGLT--------KLGIGQGDTAVVQLPNI--AE 85 (527)
T ss_pred CCcHHHHHHHHHHHCCCceEEEeCC------ceecHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCc--HH
Confidence 3579999999999999999998654 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccC--------cc-ccc-ccceeccCCCc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGL--------PK-TAA-GEVVAFKGWPK 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~--------~~-~~~-~~~~~~~~~~~ 229 (1761)
+++++|||+++|++++|+++.++.+ ++.++++++++++++++....... .. ... ..++.......
T Consensus 86 ~~~~~la~~~~G~~~v~~~~~~~~~-----~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (527)
T TIGR02275 86 FYIVFFALLKLGIAPVLALFSHRKS-----ELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRV 160 (527)
T ss_pred HHHHHHHHHHcCeEEeccccccCHH-----HHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCC
Confidence 9999999999999999999999876 899999999999999986532110 00 000 00000000000
Q ss_pred ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
... ....+.... .........++++|+|+|||||||.||||+++|+++...+......+.++++|+++.++|++|.++
T Consensus 161 ~~~-~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~ 238 (527)
T TIGR02275 161 EAE-LFLWLESPA-EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYP 238 (527)
T ss_pred cch-hhHHhhCcC-ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhh
Confidence 000 000000111 111123457899999999999999999999999999999988888899999999999999999988
Q ss_pred hHH-HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 310 LWH-SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 310 ~~~-~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
+.. .++.++..|+++++.+ .+++..+++.++++++|++..+| +++..++........+++++|.+++| |+++
T Consensus 239 ~~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~p-~~~~~l~~~~~~~~~~~~~lr~~~~g--G~~l 311 (527)
T TIGR02275 239 LSSPGALGVFYAGGCVVLAP----DPSPTDCFPLIERHKVTVTALVP-PAVALWMQAASKSRYDLSSLKLLQVG--GAKF 311 (527)
T ss_pred hhHHHHHHHHhcCCeEEECC----CCCHHHHHHHHHHhCCeEEEecH-HHHHHHHhCccccCCCccceEEEEEc--CCCC
Confidence 763 3789999999999977 67899999999999999999996 47777766555445678899999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++++.++|.+.+ |.+ +++.||+||+++..+.... .......++|+
T Consensus 312 ~~~~~~~~~~~~---g~~---~~~~YG~tE~~~~~~~~~~-----------------------------~~~~~~~~~G~ 356 (527)
T TIGR02275 312 SEAAARRVPAVF---GCQ---LQQVFGMAEGLVNYTRLDD-----------------------------PAEIIFTTQGR 356 (527)
T ss_pred CHHHHHHHHHHh---CCe---EEeeeccCccCccccCCCC-----------------------------ccccccccCCC
Confidence 999999999988 543 9999999997643321110 00123467999
Q ss_pred CC-CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 469 VM-PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 469 p~-~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
|+ ++..++|+|++++ ++|.|+.|||+|+|+.++.||+++|+.|++.|. .++||+|||+|++++||
T Consensus 357 ~~~~~~~v~i~d~~g~--~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~------------~dg~~~TGDl~~~~~~g 422 (527)
T TIGR02275 357 PMSPDDEVRVVDDHGN--PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFD------------AEGFYYTGDLVRLTPEG 422 (527)
T ss_pred CCCCCceEEEECCCCC--CCCCCCceEEEecCCccchhhcCChhHhHhhcC------------cCCCEEcCceEEEcCCc
Confidence 99 4889999999886 589999999999999999999999999998883 47899999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC-CCHHHHHHHHHHH-
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD-CSEEESFQWMSRV- 624 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~-~~~~~l~~~l~~~- 624 (1761)
+++|+||.||+||++|++|+|.|||+.|.+++.+ .+++|++.++. .++.++++++...+ .+.++++++++++
T Consensus 423 ~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~a~vv~~~~~~~~~~l~~~l~~~~ 497 (527)
T TIGR02275 423 YIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAV-----HDAALVSMPDELLGEKSCAFIVVRDPALKAAQLRRFLRERG 497 (527)
T ss_pred cEEEEecccceeecCCEEECHHHHHHHHHhCCCc-----eEEEEEecCCcccccEEEEEEEECCCCCCHHHHHHHHHhCC
Confidence 9999999999999999999999999999998888 79999999854 56888999887654 6788999999985
Q ss_pred HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHH
Q psy14338 625 LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECK 661 (1761)
Q Consensus 625 Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~ 661 (1761)
||.||+|..+ +.+++||+|++||++|++|+
T Consensus 498 l~~~~~P~~i-------~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 498 LAEYKLPDRV-------EFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred CccccCCCEE-------EEeccCCCCCccceeHHhcC
Confidence 9999999986 45599999999999999874
|
Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB. |
| >PRK04319 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-59 Score=611.77 Aligned_cols=484 Identities=17% Similarity=0.216 Sum_probs=393.0
Q ss_pred CCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1180 GAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
.+|+++|+.+.+. ...+++||+||.++++++|+.|.+. |+++||+|+++++|++++++++|||+++|++++|++|.++
T Consensus 56 ~~~~~~a~~~~~~-~~~~~~Ty~el~~~v~~~A~~L~~~-gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~ 133 (570)
T PRK04319 56 GRKDKVALRYLDA-SRKEKYTYKELKELSNKFANVLKEL-GVEKGDRVFIFMPRIPELYFALLGALKNGAIVGPLFEAFM 133 (570)
T ss_pred CCCCceEEEEECC-CCceeecHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEcccccccC
Confidence 5699999986543 2557999999999999999999998 9999999999999999999999999999999999999877
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechhHHHHHhhh--ccc-cccccccCCcc-ccCCCCc----cchhhhccCCCCCCCE
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSK--EAS-NVVDIKSWPTI-LDTDDMP----KKKLAALYRAPTAEML 1331 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~--~~~-~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~ 1331 (1761)
.+ ++.+++++++++++|++.......... ... ..+........ ....... ............++++
T Consensus 134 ~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (570)
T PRK04319 134 EE------AVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASDEFDIEWTDREDG 207 (570)
T ss_pred HH------HHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCCcCCccccCCCCC
Confidence 77 999999999999999988764432210 000 00000000000 0000000 0000111223467899
Q ss_pred EEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCH
Q psy14338 1332 AYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNP 1411 (1761)
Q Consensus 1332 a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~ 1411 (1761)
+||+|||||||.||||+++|+++++.+......+++.++|+++...+++|..+....++.+++.|+++++.+. .+++
T Consensus 208 a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~ 284 (570)
T PRK04319 208 AILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG---RFSP 284 (570)
T ss_pred EEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC---CCCH
Confidence 9999999999999999999999999888888889999999988889999888887789999999999999864 4799
Q ss_pred HHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccc
Q psy14338 1412 ALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVS 1491 (1761)
Q Consensus 1412 ~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~ 1491 (1761)
..+++.|+++++|+++++|++++.+++... ......++++||.+++||+++++ ++.+++.+.++ ..++
T Consensus 285 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----~~~~~~~~~~lr~~~~gG~~l~~-~~~~~~~~~~g------~~i~ 352 (570)
T PRK04319 285 ERWYRILEDYKVTVWYTAPTAIRMLMGAGD-----DLVKKYDLSSLRHILSVGEPLNP-EVVRWGMKVFG------LPIH 352 (570)
T ss_pred HHHHHHHHHcCCeEEEeCHHHHHHHHhcCC-----cccccCCcccceEEEEcccCCCH-HHHHHHHHHhC------CCeE
Confidence 999999999999999999999999976311 11234568899999999999999 78788777663 4689
Q ss_pred ccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEE
Q psy14338 1492 TSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEI 1571 (1761)
Q Consensus 1492 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL 1571 (1761)
+.||+||++.++...... .....+++|+|++|++++|+|++ ++++|.|++|||
T Consensus 353 ~~YG~tE~~~~~~~~~~~--------------------------~~~~~~~~G~p~~g~~~~i~d~~-~~~~~~g~~Gel 405 (570)
T PRK04319 353 DNWWMTETGGIMIANYPA--------------------------MDIKPGSMGKPLPGIEAAIVDDQ-GNELPPNRMGNL 405 (570)
T ss_pred eceeecccCCEEEecCCC--------------------------CCCCCCcCcCCCCCCEEEEECCC-CCCCCCCCceEE
Confidence 999999986543321110 00112459999999999999965 788999999999
Q ss_pred EEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccC
Q psy14338 1572 WVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALD 1649 (1761)
Q Consensus 1572 ~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~d 1649 (1761)
+|+| +++++|||| +|+.|++.| .+|||+|||+|++ ++| |+ ++|+||+|
T Consensus 406 ~i~~~~~~~~~GY~~---~~~~~~~~~---------~~gw~~TGDl~~~------~~~--------g~----l~~~GR~~ 455 (570)
T PRK04319 406 AIKKGWPSMMRGIWN---NPEKYESYF---------AGDWYVSGDSAYM------DED--------GY----FWFQGRVD 455 (570)
T ss_pred EEcCCCChHHhHhcC---CHHHhhhhh---------cCCceEeCcEEEE------CCC--------ee----EEEEecCC
Confidence 9987 899999999 999999998 2679999999999 999 99 99999999
Q ss_pred CeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc----hhHhhHHHHHHHHHhhhcCceee
Q psy14338 1650 ETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE----SEALDLVPLVTNAVLEEHHLIVG 1720 (1761)
Q Consensus 1650 d~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~----~~~~~l~~~l~~~~Lp~~~~vP~ 1720 (1761)
|+||++|++|+|.|||+ ++.+||+|.+++|++. ++.++++++..... ...++++++|+++ |+ .|++|.
T Consensus 456 d~i~~~G~~i~p~eIE~-~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~-l~-~~~~P~ 532 (570)
T PRK04319 456 DVIKTSGERVGPFEVES-KLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKG-LG-AHAAPR 532 (570)
T ss_pred CEEEECCEEECHHHHHH-HHhhCCCeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHh-cc-cccCCc
Confidence 99999999999999999 8999999999999974 45788888764321 1236889999987 88 999999
Q ss_pred EEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1721 VAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1721 ~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
.|++++ +||+|++||++|++|+++..
T Consensus 533 ~i~~v~--~iP~t~~GKv~r~~L~~~~~ 558 (570)
T PRK04319 533 EIEFKD--KLPKTRSGKIMRRVLKAWEL 558 (570)
T ss_pred EEEEeC--CCCCCCchhhhHHHHHHHHh
Confidence 999999 99999999999999999864
|
|
| >PRK07867 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-59 Score=604.53 Aligned_cols=486 Identities=17% Similarity=0.189 Sum_probs=395.7
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccC-CCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSES-SLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~-Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.+++++|++.+. ++++|+.+.+ +.+||+||.++++++|+.|+ +. |++++++|+++++|+ ++
T Consensus 5 ~~~~~~l~~~a~--~~~~a~~~~~------~~~Ty~el~~~v~~lA~~L~--------~~~~~~~~~~V~i~~~n~--~~ 66 (529)
T PRK07867 5 PTVAELLLPLAE--DDDRGLYFED------SFTSWREHIRGSAARAAALR--------ARLDPTRPPHVGVLLDNT--PE 66 (529)
T ss_pred ccHHHHHHHhcc--cCCceEEECC------cEEeHHHHHHHHHHHHHHHH--------HhhCCCCCCEEEEECCCC--HH
Confidence 468899988875 7999998754 68999999999999999999 65 799999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-cceeccCCCcceeEEeccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-EVVAFKGWPKLTWFVTEHL 238 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 238 (1761)
+++++|||+++|+++||++|.++.+ ++.+++++++++++|+++.....+...... .++.... ..+ .+.+
T Consensus 67 ~~~~~lA~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~l 136 (529)
T PRK07867 67 FSLLLGAAALSGIVPVGLNPTRRGA-----ALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDS---PAW--ADEL 136 (529)
T ss_pred HHHHHHHHHhcCCEEEEecCCCChH-----HHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEecc---ccH--HHHh
Confidence 9999999999999999999999977 899999999999999998765433222100 1111110 000 1111
Q ss_pred cCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHH
Q psy14338 239 AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSV 318 (1761)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L 318 (1761)
..............++++++|+|||||||.||||+++|+++...+......++++++|+++.++|++|..+++..++.++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l 216 (529)
T PRK07867 137 AAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVAL 216 (529)
T ss_pred cccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHH
Confidence 11111111223457899999999999999999999999999999888888899999999999999999999886677899
Q ss_pred hcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHH
Q psy14338 319 LNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLS 398 (1761)
Q Consensus 319 ~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~ 398 (1761)
..|+++++.+ .+++..+++.++++++|++.++|+ .+..++..........+++|. ++| |+++++. ..+|.+
T Consensus 217 ~~G~~~~~~~----~~~~~~~~~~i~~~~vt~~~~~p~-~~~~ll~~~~~~~~~~~~lr~-~~g--g~~~~~~-~~~~~~ 287 (529)
T PRK07867 217 AAGASIALRR----KFSASGFLPDVRRYGATYANYVGK-PLSYVLATPERPDDADNPLRI-VYG--NEGAPGD-IARFAR 287 (529)
T ss_pred hcCceEEecC----CCCHHHHHHHHHHhCCeEEeccHH-HHHHHHhCCCcccccccceEE-Eec--CCCChHH-HHHHHH
Confidence 9999999987 678999999999999999999864 666665544322233467885 456 7777665 577877
Q ss_pred HhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEE
Q psy14338 399 VFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478 (1761)
Q Consensus 399 ~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~ 478 (1761)
.+ |.+ ++|.||+||++.+++..+. ....++|+|+++ ++|+
T Consensus 288 ~~---g~~---l~~~YG~TE~~~~~~~~~~--------------------------------~~~~~~g~~~~~--~~i~ 327 (529)
T PRK07867 288 RF---GCV---VVDGFGSTEGGVAITRTPD--------------------------------TPPGALGPLPPG--VAIV 327 (529)
T ss_pred Hh---CCc---EEEeecccccccccccCCC--------------------------------CCCCCcCCCCCC--EEEE
Confidence 77 443 9999999999865432210 124578999999 7888
Q ss_pred eCC-CCcccCCCCC------------ceEEEE-ecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEe
Q psy14338 479 KMD-SPSYLCKTDE------------VGEICV-ASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLG 544 (1761)
Q Consensus 479 d~~-~~~~~~p~G~------------~GEL~i-~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~ 544 (1761)
|++ +. +++.|+ +|||++ +|++++.||+|+|+.|++.|. ++||+|||+|+++
T Consensus 328 ~~~~~~--~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~-------------~g~~~TGD~~~~~ 392 (529)
T PRK07867 328 DPDTGT--ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMR-------------GGVYWSGDLAYRD 392 (529)
T ss_pred ECCCCC--CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhc-------------CCeEeeccEEEEe
Confidence 854 44 589998 999999 999999999999999999884 7899999999999
Q ss_pred CCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHH
Q psy14338 545 PGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWM 621 (1761)
Q Consensus 545 ~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l 621 (1761)
+||+++|+||+||+||++|+||+|.|||+.|.+++.| .+++|++.++ ..+++++++++..++ .+.++++++|
T Consensus 393 ~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V-----~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~ 467 (529)
T PRK07867 393 ADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDA-----TEVAVYAVPDPVVGDQVMAALVLAPGAKFDPDAFAEFL 467 (529)
T ss_pred CCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCe-----eEEEEEeccCCCCCeeEEEEEEECCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999998887 7999999985 467888888887654 6788999999
Q ss_pred HHH--HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCC
Q psy14338 622 SRV--LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLH 670 (1761)
Q Consensus 622 ~~~--Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~ 670 (1761)
+++ |+.||+|..+ +.+++||+|++||++|++|+++...+..+
T Consensus 468 ~~~~~l~~~~~P~~i-------~~~~~iP~t~~GKv~r~~L~~~~~~~~~~ 511 (529)
T PRK07867 468 AAQPDLGPKQWPSYV-------RVCAELPRTATFKVLKRQLSAEGVDCADP 511 (529)
T ss_pred HhhccCCcccCCeEE-------EEeeccCCCCCcceeHHHHHHhcCCCCCC
Confidence 876 9999999986 44599999999999999999987655444
|
|
| >PLN02246 4-coumarate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-59 Score=609.44 Aligned_cols=498 Identities=19% Similarity=0.248 Sum_probs=400.7
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.+++++. ++|+++|++.. ..++++||.||.++++++|+.|.+. |+++||+|+++++|++++++++||
T Consensus 24 ~~~~~l~~~~~-----~~~~~~a~~~~---~~~~~~ty~el~~~~~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~la 94 (537)
T PLN02246 24 PLHDYCFERLS-----EFSDRPCLIDG---ATGRVYTYADVELLSRRVAAGLHKL-GIRQGDVVMLLLPNCPEFVLAFLG 94 (537)
T ss_pred cHHHHHHHHHH-----hCCCCeEEEec---CCCceeeHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCChHHHHHHHH
Confidence 45555666554 67999998831 1247899999999999999999998 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc---ccccccccCC-ccccCCC-Cccch
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA---SNVVDIKSWP-TILDTDD-MPKKK 1318 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~-~~~~~ 1318 (1761)
|+++|++++|+||.+|.+ ++..++++++++++|++......+..... ...+...... ....... .....
T Consensus 95 ~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 168 (537)
T PLN02246 95 ASRRGAVTTTANPFYTPA------EIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELTQADE 168 (537)
T ss_pred HHHcCEEEecCCCCCCHH------HHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHHhcCCC
Confidence 999999999999988877 99999999999999998876655443321 0111110000 0000000 00000
Q ss_pred hhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHH----HcCcCCCCeEEEEeCCccChhHHHHHHHHhh
Q psy14338 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----ACELYPSRHIALCLDPYCGLGFALWVLSSVY 1394 (1761)
Q Consensus 1319 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~ 1394 (1761)
...+.....+++++|++|||||||.||||+++|+++.+.+..... .+++.++|+++...|++|.+++...++.++.
T Consensus 169 ~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~ 248 (537)
T PLN02246 169 NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLR 248 (537)
T ss_pred CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHh
Confidence 011122346789999999999999999999999999887765543 5678899999999999998888666788999
Q ss_pred cCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHH
Q psy14338 1395 SGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTS 1474 (1761)
Q Consensus 1395 ~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~ 1474 (1761)
.|+++++.+. +++..+++.|+++++|++.++|+++..|.+.. .....+++++|.+++||+++++ .+.+
T Consensus 249 ~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------~~~~~~~~~lr~~~~gg~~l~~-~~~~ 316 (537)
T PLN02246 249 VGAAILIMPK----FEIGALLELIQRHKVTIAPFVPPIVLAIAKSP-------VVEKYDLSSIRMVLSGAAPLGK-ELED 316 (537)
T ss_pred cCCEEEEeCC----CCHHHHHHHHHHhCceEEEcchHHHHHHhcCc-------cccccCccceeEEEEecCcCCH-HHHH
Confidence 9999999974 68999999999999999999999999886531 2234567899999999999999 7888
Q ss_pred HHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEE
Q psy14338 1475 AFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVII 1554 (1761)
Q Consensus 1475 ~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v 1554 (1761)
.+.+.++. ..+++.||+||++.+++........ +...+..++|+|+++++++|
T Consensus 317 ~~~~~~~~-----~~~~~~YG~tE~~~~~~~~~~~~~~----------------------~~~~~~~~~G~~~~~~~~~i 369 (537)
T PLN02246 317 AFRAKLPN-----AVLGQGYGMTEAGPVLAMCLAFAKE----------------------PFPVKSGSCGTVVRNAELKI 369 (537)
T ss_pred HHHHHcCC-----CeEeccccccccCcccccccccCCC----------------------CccccCCccccccCCcEEEE
Confidence 88877642 5688999999987544322110000 00011235999999999999
Q ss_pred EcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCC
Q psy14338 1555 ANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPG 1634 (1761)
Q Consensus 1555 ~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g 1634 (1761)
+|+++++++|.|+.|||+|+|++++.||++ +|+.|.++| ..++||+|||+|++ ++|
T Consensus 370 ~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~---~~~~~~~~~--------~~~~~~~TGD~~~~------~~~------- 425 (537)
T PLN02246 370 VDPETGASLPRNQPGEICIRGPQIMKGYLN---DPEATANTI--------DKDGWLHTGDIGYI------DDD------- 425 (537)
T ss_pred ecCCCCCcCCCCCceEEEEECCchhccccC---Cchhhhhcc--------cCCCCeeecceEEE------eCC-------
Confidence 998778999999999999999999999999 999999888 45789999999999 899
Q ss_pred CCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHHH
Q psy14338 1635 VSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLVT 1708 (1761)
Q Consensus 1635 ~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l~ 1708 (1761)
|+ ++|+||+||+||++|+||+|.|||+ ++.+||+|.+|+|++. ++.++++++... ...+.++++++|+
T Consensus 426 -g~----l~~~GR~dd~i~~~G~~i~~~eIE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~ 499 (537)
T PLN02246 426 -DE----LFIVDRLKELIKYKGFQVAPAELEA-LLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSEITEDEIKQFVA 499 (537)
T ss_pred -Ce----EEEEecccceEEECCEEECcHHHHH-HHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCCCCHHHHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 456778877643 3456678999999
Q ss_pred HHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1709 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1709 ~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
++ |+ .||+|..|++++ +||+|++||++|++|++.+.+
T Consensus 500 ~~-l~-~~~~p~~i~~~~--~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 500 KQ-VV-FYKRIHKVFFVD--SIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred hh-Cc-CccccceEEEec--cCCCCCcchhhHHHHHHHHhc
Confidence 87 88 999999999999 999999999999999998754
|
|
| >PRK08316 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-59 Score=608.72 Aligned_cols=499 Identities=19% Similarity=0.236 Sum_probs=416.1
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|..+++++|+++|+.+.+ +.+||+||.++++++|..|. +.|+++|++|+++++|+ .+
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~--------~~gi~~~~~V~l~~~~~--~~ 73 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFGD------RSWTYAELDAAVNRVAAALL--------DLGLKKGDRVAALGHNS--DA 73 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECC------ceeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HH
Confidence 3679999999999999999998765 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc---cceeccC-----CCcce
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG---EVVAFKG-----WPKLT 231 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~ 231 (1761)
+++++|||+++|++++|+++.++.+ ++.++++.+++++++++......+...... ....... .....
T Consensus 74 ~~~~~~a~~~~G~~~v~l~~~~~~~-----~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (523)
T PRK08316 74 YALLWLACARAGAVHVPVNFMLTGE-----ELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGG 148 (523)
T ss_pred HHHHHHHHHhcCcEEEecccccCHH-----HHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccc
Confidence 9999999999999999999999876 899999999999999998765443221100 0000000 00000
Q ss_pred eEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhH
Q psy14338 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLW 311 (1761)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 311 (1761)
+...+................++++++++|||||||+||+|+++|+++...+......+++.++++++.++|++|..++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~ 228 (523)
T PRK08316 149 WLDFADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLD 228 (523)
T ss_pred hhhHHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHH
Confidence 00001111111111123345778999999999999999999999999999888888888999999999999999999886
Q ss_pred HHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHH
Q psy14338 312 HSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLS 391 (1761)
Q Consensus 312 ~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~ 391 (1761)
..++.++..|+++++.+ ..++..+++.++++++|++..+| .++..++........++++||.+++| |++++.+
T Consensus 229 ~~~~~~~~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~l~~~~~g--g~~~~~~ 301 (523)
T PRK08316 229 VFLGPYLYVGATNVILD----APDPELILRTIEAERITSFFAPP-TVWISLLRHPDFDTRDLSSLRKGYYG--ASIMPVE 301 (523)
T ss_pred HHHHHHHhcCceEEEec----CCCHHHHHHHHHHhCCeEEEeCH-HHHHHHHcCcccccCCcccceEEEEc--CCcCCHH
Confidence 54666789999999987 56899999999999999999986 57777777665556678899999999 9999999
Q ss_pred HHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCC
Q psy14338 392 SCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP 471 (1761)
Q Consensus 392 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 471 (1761)
+.+.|.+.++. . .+++.||+||++.+++..... ......+++|+|++
T Consensus 302 ~~~~~~~~~~~--~---~~~~~YG~tE~~~~~~~~~~~----------------------------~~~~~~~~~G~~~~ 348 (523)
T PRK08316 302 VLKELRERLPG--L---RFYNCYGQTEIAPLATVLGPE----------------------------EHLRRPGSAGRPVL 348 (523)
T ss_pred HHHHHHHHcCC--C---ceeeeecccccCccccccCcc----------------------------ccccccCCcccCCC
Confidence 99999998752 3 499999999998765543211 00123568999999
Q ss_pred CcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEE
Q psy14338 472 GCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFV 551 (1761)
Q Consensus 472 ~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~ 551 (1761)
+++++|+|++++ ++|.|+.|||+++|+.++.||+++++.|++.|. ++||+|||+|++++||.+++
T Consensus 349 ~~~~~i~~~~~~--~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~-------------~~~~~TGDl~~~~~~g~l~i 413 (523)
T PRK08316 349 NVETRVVDDDGN--DVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFR-------------GGWFHSGDLGVMDEEGYITV 413 (523)
T ss_pred CcEEEEEcCCCC--CCCCCCcceEEEECCchhhhhcCCHHHHHHHhh-------------CCCeeccceEEEcCCceEEE
Confidence 999999999886 589999999999999999999999999999984 78999999999999999999
Q ss_pred EeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHh
Q psy14338 552 CGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQAV 628 (1761)
Q Consensus 552 ~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y 628 (1761)
+||+||+||++|++|+|.|||+.+.+++.+ .+++|++.++ ..++.++++++..++ .+.+++++++++.|+.|
T Consensus 414 ~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~ 488 (523)
T PRK08316 414 VDRKKDMIKTGGENVASREVEEALYTHPAV-----AEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDELIAHCRARLAGF 488 (523)
T ss_pred ecccccEEEeCCeEECHHHHHHHHHhCCCh-----heEeEecccCcccCCeEEEEEEECCCCCCCHHHHHHHHHHhcccC
Confidence 999999999999999999999999988888 7999999874 357789999988765 56788999999999999
Q ss_pred hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 629 DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 629 ~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++|..+ +.++++|+|++||++|++|++.|.+
T Consensus 489 ~~p~~i-------~~v~~~p~t~~gKi~r~~l~~~~~~ 519 (523)
T PRK08316 489 KVPKRV-------IFVDELPRNPSGKILKRELRERYAG 519 (523)
T ss_pred CCCcEE-------EEecCCCCCCccceeHHHHHHHHHh
Confidence 999987 4559999999999999999998863
|
|
| >PRK05605 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-59 Score=613.58 Aligned_cols=498 Identities=18% Similarity=0.212 Sum_probs=406.3
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|+++++++|+++|+.+.+ +.+||+||.++++++|+.|. +.|+++||+|+++++|+ +++
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~~~------~~~Ty~ql~~~~~~~A~~L~--------~~gi~~gd~V~l~~~n~--~~~ 95 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDFFG------ATTTYAELGKQVRRAAAGLR--------ALGVRPGDRVAIVLPNC--PQH 95 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeCC------CcccHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCC--HHH
Confidence 479999999999999999998754 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc----cccceeccC---CC-----
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA----AGEVVAFKG---WP----- 228 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~----~~~~~~~~~---~~----- 228 (1761)
++++|||+++|+++||++|.++.+ ++.+++++++++++|+++.....+.... ...++.... .+
T Consensus 96 ~~~~lA~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 170 (573)
T PRK05605 96 IVAFYAVLRLGAVVVEHNPLYTAH-----ELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRL 170 (573)
T ss_pred HHHHHHHHhcCcEEeecCcCCCHH-----HHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccc
Confidence 999999999999999999999976 8999999999999999776433221110 000110000 00
Q ss_pred -------cc------------eeEE-eccccCCCCC---CCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHH
Q psy14338 229 -------KL------------TWFV-TEHLAKTPKD---WAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRA 285 (1761)
Q Consensus 229 -------~~------------~~~~-~~~~~~~~~~---~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~ 285 (1761)
.. .... .+........ ........+++++|++|||||||.||||+++|+++...+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~ 250 (573)
T PRK05605 171 ALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQ 250 (573)
T ss_pred ccccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHH
Confidence 00 0000 0000000000 01122356789999999999999999999999999887765
Q ss_pred HHHHcC-C-CCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhh
Q psy14338 286 LTQACH-Y-TEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLL 363 (1761)
Q Consensus 286 ~~~~~~-~-~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll 363 (1761)
....+. + ..+++++..+|++|..++...++.++..|+++++.+ ..++..+++.|+++++|++..+| +++..++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~P-~~~~~l~ 325 (573)
T PRK05605 251 GKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLP----APDIDLILDAMKKHPPTWLPGVP-PLYEKIA 325 (573)
T ss_pred HHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeC----CCCHHHHHHHHHHhCCEEEEchH-HHHHHHH
Confidence 544433 2 347899999999999988766788899999999987 67899999999999999999986 5888887
Q ss_pred cCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCcccccc
Q psy14338 364 ATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMS 443 (1761)
Q Consensus 364 ~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~ 443 (1761)
........++++||.+++| |+++++++.++|.+.+ +.+ +++.||+||++.+++..+..
T Consensus 326 ~~~~~~~~~~~~lr~i~~g--g~~l~~~~~~~~~~~~---~~~---i~~~YG~TE~~~~~~~~~~~-------------- 383 (573)
T PRK05605 326 EAAEERGVDLSGVRNAFSG--AMALPVSTVELWEKLT---GGL---LVEGYGLTETSPIIVGNPMS-------------- 383 (573)
T ss_pred hCccccCCCchhccEEEEC--CCcCCHHHHHHHHHHh---CCC---eecccccchhchhhhcCCcc--------------
Confidence 7655555678899999999 9999999999998877 433 99999999998665533211
Q ss_pred CcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccc
Q psy14338 444 GLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLL 523 (1761)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~ 523 (1761)
.....+++|+|++|+.++|+|+++...++|.|+.|||+|+|++++.||+++++.|++.|.
T Consensus 384 ---------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~----- 443 (573)
T PRK05605 384 ---------------DDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFL----- 443 (573)
T ss_pred ---------------cCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhccc-----
Confidence 012356899999999999999876223699999999999999999999999999999884
Q ss_pred cCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceE
Q psy14338 524 ADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERI 602 (1761)
Q Consensus 524 ~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l 602 (1761)
++||+|||+|+++++|+++|+||+||+||++|++|+|.|||+.+..++.+ .+++|++.++ ..++.+
T Consensus 444 --------~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i-----~~~~v~~~~~~~~~~~~ 510 (573)
T PRK05605 444 --------DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGV-----EDAAVVGLPREDGSEEV 510 (573)
T ss_pred --------CCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCccc-----ceEEEEeeecccCCeEE
Confidence 56999999999999999999999999999999999999999999988777 7999999874 466889
Q ss_pred EEEEEeCCC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 603 CVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 603 ~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++++++.++ .+.++++++++++|+.|++|..+ +.+++||+|.+||++|++|++++.+
T Consensus 511 ~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~i-------~~~~~iP~t~~GKi~r~~L~~~~~~ 569 (573)
T PRK05605 511 VAAVVLEPGAALDPEGLRAYCREHLTRYKVPRRF-------YHVDELPRDQLGKVRRREVREELLE 569 (573)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHhCccccCCcEE-------EEeccCCCCCcccccHHHHHHHHHH
Confidence 998887654 67889999999999999999986 5569999999999999999988753
|
|
| >PRK03584 acetoacetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-59 Score=620.96 Aligned_cols=493 Identities=15% Similarity=0.144 Sum_probs=382.7
Q ss_pred CCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1180 GAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
.+|+++|+++.+.....+++||+||.++++++|+.|++. |+++||+|+|+++|++++++++|||+++|++++|++|.++
T Consensus 96 ~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~ 174 (655)
T PRK03584 96 RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRAL-GVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFG 174 (655)
T ss_pred CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCC
Confidence 359999999765544567999999999999999999999 9999999999999999999999999999999999999887
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechhHH---------HHHhhh----ccc-ccccccc---------------CCcccc
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNVI---------KLLKSK----EAS-NVVDIKS---------------WPTILD 1310 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~~~---------~~~~~~----~~~-~~~~~~~---------------~~~~~~ 1310 (1761)
.+ ++.+++++++++++|+++... ..+... ... .++.... |.+...
T Consensus 175 ~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (655)
T PRK03584 175 VQ------GVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALLWEDFLA 248 (655)
T ss_pred HH------HHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCCcccHHHHhh
Confidence 77 999999999999999976421 111111 000 0110000 000000
Q ss_pred CCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHH-HHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHH
Q psy14338 1311 TDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVT-SLCRSMKLACELYPSRHIALCLDPYCGLGFALWV 1389 (1761)
Q Consensus 1311 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 1389 (1761)
. ............+++++||+|||||||+||||+++|++++ +.+......+++.++|+++...++.|... ..+
T Consensus 249 ~----~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~ 322 (655)
T PRK03584 249 P----AEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMW--NWL 322 (655)
T ss_pred c----cccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhH--HHH
Confidence 0 0000111123467899999999999999999999999875 45666777889999888877666655432 346
Q ss_pred HHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCCh
Q psy14338 1390 LSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPR 1469 (1761)
Q Consensus 1390 ~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~ 1469 (1761)
+.+|++|+++++.+......++..+++.|+++++|++.++|++++.+.+.- .......++++||.+++|||++++
T Consensus 323 ~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-----~~~~~~~~l~sLr~i~~~Ge~l~~ 397 (655)
T PRK03584 323 VSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAG-----LVPGETHDLSALRTIGSTGSPLPP 397 (655)
T ss_pred HHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcC-----CCccccCChhheEEEEEecCCCCH
Confidence 789999999999875333468999999999999999999999999986521 001234678999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCC
Q psy14338 1470 IHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPG 1549 (1761)
Q Consensus 1470 ~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~ 1549 (1761)
++.+++.+.+.. ...+.+.||+||++......... .....+++|.|++|
T Consensus 398 -~~~~~~~~~~~~----~~~~~~~yG~TE~~~~~~~~~~~--------------------------~~~~~g~~g~p~~g 446 (655)
T PRK03584 398 -EGFDWVYEHVKA----DVWLASISGGTDICSCFVGGNPL--------------------------LPVYRGEIQCRGLG 446 (655)
T ss_pred -HHHHHHHHHhCC----CceEEeccChHhhhcccccCCCC--------------------------CCcCCCccCCCcCC
Confidence 788888777631 25789999999964321111000 00112458999999
Q ss_pred cEEEEEcCCCCCCCCCCcceEEEEcCC--cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCC
Q psy14338 1550 VKVIIANPETKGQCGDSHLGEIWVQSP--HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVA 1627 (1761)
Q Consensus 1550 ~~~~v~d~~~~~~~p~G~~GEL~i~g~--~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d 1627 (1761)
++++|+|++ ++++ .|+.|||+|+|+ +++.|||| +|+.++ |....|. ...+||+|||+|++ |+|
T Consensus 447 ~~~~ivd~~-g~~~-~g~~GeL~v~gp~p~~~~gy~~---~~~~~~--~~~~~~~--~~~g~~~TGDl~~~------d~d 511 (655)
T PRK03584 447 MAVEAWDED-GRPV-VGEVGELVCTKPFPSMPLGFWN---DPDGSR--YRDAYFD--TFPGVWRHGDWIEI------TEH 511 (655)
T ss_pred ceeEEECCC-CCCC-CCCceEEEEccCCCCCcceeeC---CCccch--HHHhhhc--cCCCEeecCCeEEE------CCC
Confidence 999999965 7888 799999999996 79999999 887543 2222221 12469999999999 999
Q ss_pred CCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC-chh--
Q psy14338 1628 GAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN-ESE-- 1699 (1761)
Q Consensus 1628 ~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~-~~~-- 1699 (1761)
|+ ++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.+++||++... ..+
T Consensus 512 --------G~----l~i~GR~dd~Ik~~G~rI~p~EIE~-~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~ 578 (655)
T PRK03584 512 --------GG----VVIYGRSDATLNRGGVRIGTAEIYR-QVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDA 578 (655)
T ss_pred --------Ce----EEEEeeccCeeecCcEEECHHHHHH-HHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHH
Confidence 99 9999999999999999999999999 8999999999999975 3478889887532 222
Q ss_pred -HhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCC
Q psy14338 1700 -ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 1753 (1761)
Q Consensus 1700 -~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~ 1753 (1761)
.++|+++|+++ |+ .||+|+.|++++ +||+|+||||+|++|++.+.+....
T Consensus 579 ~~~~l~~~~~~~-L~-~~~~P~~i~~v~--~lP~t~sGKi~r~~lr~~~~~~~~~ 629 (655)
T PRK03584 579 LRARIRTTIRTN-LS-PRHVPDKIIAVP--DIPRTLSGKKVELPVKKLLHGRPVK 629 (655)
T ss_pred HHHHHHHHHHhh-CC-CCcCCCEEEECC--CCCCCCCccchHHHHHHHHcCCCCC
Confidence 35789999987 88 999999999999 9999999999999999998766544
|
|
| >PRK10946 entE enterobactin synthase subunit E; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-59 Score=606.01 Aligned_cols=493 Identities=17% Similarity=0.199 Sum_probs=400.4
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|+++++ |+++|+++.+ +.+||+||.++++++|+.|. +.|+++|++|+++++|+ +++
T Consensus 25 ~~~~~~~~~~a~--p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~--------~~g~~~g~~V~v~~~n~--~~~ 86 (536)
T PRK10946 25 LPLTDILTRHAA--SDAIAVICGE------RQFSYRELNQASDNLACSLR--------RQGIKPGDTALVQLGNV--AEF 86 (536)
T ss_pred ccHHHHHHHhhC--CCCeEEEeCC------CcccHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCh--HHH
Confidence 579999999887 9999999754 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccc--------cCcccc-cccceeccCCCcce
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLK--------GLPKTA-AGEVVAFKGWPKLT 231 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~ 231 (1761)
++++|||+++|++++++++..+.. ++..+++++++++++++..... .+.... ....+.........
T Consensus 87 ~~~~la~~~~G~v~v~~~~~~~~~-----~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 161 (536)
T PRK10946 87 YITFFALLKLGVAPVNALFSHQRS-----ELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEH 161 (536)
T ss_pred HHHHHHHHHcCeEEecCCccccHH-----HHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCc
Confidence 999999999999777666655543 7999999999999999864311 000000 00001000000000
Q ss_pred eEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhH
Q psy14338 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLW 311 (1761)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 311 (1761)
...+...... ...+.....++++||++|||||||.||||+++|+++...+......++++++|++++.+|++|.+++.
T Consensus 162 -~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~ 239 (536)
T PRK10946 162 -SLDDAINHPA-EDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMS 239 (536)
T ss_pred -cHHHHhhCcc-cccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccch
Confidence 0000011111 11112334678999999999999999999999999999999888899999999999999999988765
Q ss_pred H-HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC--CCCCCCCCCceeEEEecCCCccC
Q psy14338 312 H-SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT--KDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 312 ~-~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~--~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
. .++.+|..|+++++.+ .+++..+++.++++++|++.++|+ ++..++.. .......+++||.+++| |+++
T Consensus 240 ~~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~p~-~~~~l~~~~~~~~~~~~~~~l~~v~~g--g~~l 312 (536)
T PRK10946 240 SPGALGVFLAGGTVVLAP----DPSATLCFPLIEKHQVNVTALVPP-AVSLWLQAIAEGGSRAQLASLKLLQVG--GARL 312 (536)
T ss_pred hhhHHHHhhcCcEEEECC----CCCHHHHHHHHHHhCCcEEEeChH-HHHHHHhhhcccCccccccceeEEEEC--CCCC
Confidence 2 4788999999999987 678999999999999999999975 66666554 22233457899999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++.+.++|.+.+ |++ +++.||+||+++..+... . .......++|+
T Consensus 313 ~~~~~~~~~~~~---g~~---~~~~YG~tE~~~~~~~~~-~----------------------------~~~~~~~~~G~ 357 (536)
T PRK10946 313 SETLARRIPAEL---GCQ---LQQVFGMAEGLVNYTRLD-D----------------------------SDERIFTTQGR 357 (536)
T ss_pred CHHHHHHHHHhc---CCe---EEEeecccccceeeecCC-C----------------------------ccccccccCCc
Confidence 999999998887 543 999999999764432111 0 01123568999
Q ss_pred CC-CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 469 VM-PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 469 p~-~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
|+ +++.++|+|++++ ++|.|++|||+|+|+.++.||+|+|+.|++.|. .++||+|||+|++|+||
T Consensus 358 p~~~~~~v~i~d~~~~--~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~------------~d~~~~TGDl~~~d~~G 423 (536)
T PRK10946 358 PMSPDDEVWVADADGN--PLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFD------------ANGFYCSGDLVSIDPDG 423 (536)
T ss_pred ccCCCceEEEECCCCC--CCCCCCccEEEEecCccchhhcCCcccchhhcc------------cCCceecCceEEECCCC
Confidence 99 7999999999886 599999999999999999999999999999984 47899999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHH-H
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRV-L 625 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~-L 625 (1761)
+++|+||.||+||++|++|+|.|||+.|.+++++ .+++|++.++. .++.+++++++.++.+.+++++++++. |
T Consensus 424 ~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~l~~~~~~~~l 498 (536)
T PRK10946 424 YITVVGREKDQINRGGEKIAAEEIENLLLRHPAV-----IHAALVSMEDELMGEKSCAFLVVKEPLKAVQLRRFLREQGI 498 (536)
T ss_pred cEEEeccccceeecCCEEEcHHHHHHHHHhCCCc-----ceEEEEcCCCcccCceEEEEEEeCCCCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999998888 68999998854 577899999988778899999999986 9
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
|.||+|..+ +.++++|+|++||++|++|++++..
T Consensus 499 ~~~~~P~~~-------~~~~~iP~t~~GKv~r~~L~~~~~~ 532 (536)
T PRK10946 499 AEFKLPDRV-------ECVDSLPLTAVGKVDKKQLRQWLAS 532 (536)
T ss_pred cccccCcEE-------EEeccCCCCCCCcccHHHHHHHHHh
Confidence 999999986 5569999999999999999988653
|
|
| >PRK12492 long-chain-fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-59 Score=607.60 Aligned_cols=496 Identities=20% Similarity=0.289 Sum_probs=398.8
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccC-CCCCCCEEEEEccCCCch
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSES-SLKSGDRIALVYPNNDPI 158 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~-Gv~~g~~V~l~~~~s~~~ 158 (1761)
.+++.++|.++++++|+++|+...+ +.+||+||+++++++|+.|. +. |+++||+|+++++|+ +
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~--------~~~gi~~gd~V~i~~~n~--~ 86 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNLG------VTLSYAELERHSAAFAAYLQ--------QHTDLVPGDRIAVQMPNV--L 86 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecCC------ceeeHHHHHHHHHHHHHHHH--------HhcCCCCCCEEEEECCCC--H
Confidence 3579999999999999999998643 58999999999999999998 64 899999999999999 9
Q ss_pred hHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----cceec--cC-CCcce
Q psy14338 159 NFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----EVVAF--KG-WPKLT 231 (1761)
Q Consensus 159 ~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~--~~-~~~~~ 231 (1761)
++++++|||+++|++++|++|.++.+ ++.+++++++++++++++...+.+...... ..... .. .+...
T Consensus 87 e~~~~~la~~~~G~v~v~~~~~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (562)
T PRK12492 87 QYPIAVFGALRAGLIVVNTNPLYTAR-----EMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAK 161 (562)
T ss_pred HHHHHHHHHHHcCeEEeccCccCCHH-----HHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhcccccc
Confidence 99999999999999999999999876 899999999999999976433221110000 00000 00 00000
Q ss_pred -eEE----------------------eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH
Q psy14338 232 -WFV----------------------TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ 288 (1761)
Q Consensus 232 -~~~----------------------~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~ 288 (1761)
+.. .+................++++++|+|||||||.||||+++|+++.+.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~ 241 (562)
T PRK12492 162 GWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRA 241 (562)
T ss_pred chhcccccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHH
Confidence 000 000000000001112346789999999999999999999999999887766655
Q ss_pred HcC---------CCC-CCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHH
Q psy14338 289 ACH---------YTE-GENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDL 358 (1761)
Q Consensus 289 ~~~---------~~~-~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~ 358 (1761)
.++ +.. +++++.++|++|.+++...++..+..|+++++... .+++..+++.|+++++|++..+| ++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p-~~ 317 (562)
T PRK12492 242 CLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITN---PRDIPGFIKELGKWRFSALLGLN-TL 317 (562)
T ss_pred HHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecC---CcCHHHHHHHHHHhCCceeeCcH-HH
Confidence 443 233 35778999999999986557777888988877653 56899999999999999999986 47
Q ss_pred HHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCc
Q psy14338 359 HWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRG 438 (1761)
Q Consensus 359 ~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~ 438 (1761)
+..++........+++++|.+++| |+++++++.++|.+.+ |++ +++.||+||++.+++..+..
T Consensus 318 ~~~l~~~~~~~~~~~~~lr~~~~g--G~~~~~~~~~~~~~~~---~~~---~~~~YG~tE~~~~~~~~~~~--------- 380 (562)
T PRK12492 318 FVALMDHPGFKDLDFSALKLTNSG--GTALVKATAERWEQLT---GCT---IVEGYGLTETSPVASTNPYG--------- 380 (562)
T ss_pred HHHHHhCcCcccccccceeEEEec--cccCCHHHHHHHHHHh---CCc---eeeccCccccCceeeecCCc---------
Confidence 777777655555678899999999 9999999999999877 554 99999999998766543311
Q ss_pred cccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCcccccccc
Q psy14338 439 VLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFK 518 (1761)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~ 518 (1761)
......++|+|+++++++|+|+++. ++|.|+.|||+|+|+.+++|||++|+.|++.|.
T Consensus 381 --------------------~~~~~~~~G~p~~~~~v~ivd~~~~--~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~ 438 (562)
T PRK12492 381 --------------------ELARLGTVGIPVPGTALKVIDDDGN--ELPLGERGELCIKGPQVMKGYWQQPEATAEALD 438 (562)
T ss_pred --------------------ccccCCccceecCCCEEEEECCCCC--CCCCCCceEEEEeCCccccccccCchhhhhccc
Confidence 0112467999999999999999886 589999999999999999999999999999883
Q ss_pred ccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-
Q psy14338 519 VTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL- 597 (1761)
Q Consensus 519 ~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~- 597 (1761)
.++||+|||+|+++++|.++|+||+|++||++|++|+|.|||+.+.+++.+ .+++|++.++.
T Consensus 439 ------------~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v-----~~~~v~~~~~~~ 501 (562)
T PRK12492 439 ------------AEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKV-----ANCAAIGVPDER 501 (562)
T ss_pred ------------CCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCe-----eEEEEEeccCCC
Confidence 368999999999999999999999999999999999999999999998877 79999998753
Q ss_pred CCceEEEEEEeCC-CCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHH
Q psy14338 598 RDERICVIAEQRP-DCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR 663 (1761)
Q Consensus 598 ~~~~l~a~v~~~~-~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~ 663 (1761)
.++.++++++... ..+.++++++++++|+.|++|..+ ..+++||+|++||++|++|++.
T Consensus 502 ~~~~~~~~v~~~~~~~~~~~i~~~~~~~l~~~~~P~~i-------~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 502 SGEAVKLFVVARDPGLSVEELKAYCKENFTGYKVPKHI-------VLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred CCceEEEEEEeCCCCCCHHHHHHHHHHhcccccCCcEE-------EEeccCCCCCCCceeHHHHHhh
Confidence 5678888887644 367789999999999999999986 4569999999999999999864
|
|
| >PLN03052 acetate--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-59 Score=615.16 Aligned_cols=490 Identities=16% Similarity=0.164 Sum_probs=375.3
Q ss_pred CCCCCCceEEccCCC---CceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC
Q psy14338 1180 GAPVPPGVSSVDTRS---AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~---~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp 1256 (1761)
++|+++|+++.+... ..+++||+||.++++++|+.|++. |+++||+|+++++|++++++++|||+++|++++|++|
T Consensus 187 ~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 187 KTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDAL-GFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred cCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCC
Confidence 569999999754321 236899999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCCCccCChHHHHHHHHhcCCeEEEechhHHH---------HHhhhccccccccc---------------cCCccccCC
Q psy14338 1257 PHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIK---------LLKSKEASNVVDIK---------------SWPTILDTD 1312 (1761)
Q Consensus 1257 ~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~---------~~~~~~~~~~~~~~---------------~~~~~~~~~ 1312 (1761)
.++.+ ++.+++++++++++|+++.... .+.......++... .|.+++...
T Consensus 266 ~~~~~------~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (728)
T PLN03052 266 SFAPS------EIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARA 339 (728)
T ss_pred CCCHH------HHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccccCCccHHHHHhcc
Confidence 88887 9999999999999999864321 11110000000000 011110000
Q ss_pred CCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1313 DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1313 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
...............+++++||+|||||||+||||+++|++++..+......+++.++|+++..+++.|.++. +.++.+
T Consensus 340 ~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~w~~g~-~~v~~~ 418 (728)
T PLN03052 340 NGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGP-WLVYAS 418 (728)
T ss_pred ccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCcHHHhHH-HHHHHH
Confidence 0000000000112246899999999999999999999999988877777777889999988888888888776 568899
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHL 1472 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l 1472 (1761)
|++|+++++.+. ..++..+++.+++++||++.++|++++.|.+.- .....++++||.+++|||++++ +.
T Consensus 419 L~~Gat~vl~~g---~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~-------~~~~~dlssLr~i~s~Ge~l~~-~~ 487 (728)
T PLN03052 419 LLNGATLALYNG---SPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTN-------CMAGLDWSSIRCFGSTGEASSV-DD 487 (728)
T ss_pred HHhCCEEEEeCC---CCCCChHHHHHHHHCCCEEEECHHHHHHHHhcC-------CcccCChhheeEEEecCCCCCH-HH
Confidence 999999999875 245678999999999999999999999986521 1245678999999999999998 55
Q ss_pred HHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEE
Q psy14338 1473 TSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKV 1552 (1761)
Q Consensus 1473 ~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 1552 (1761)
..++.+.++ . ..+.+.||+||++........ . . + ...+++|+|++|+++
T Consensus 488 ~~~~~~~~~---~--~~i~~~yG~TE~~~~~~~~~~--~-----------~-----------~--~~~g~~g~p~~g~~v 536 (728)
T PLN03052 488 YLWLMSRAG---Y--KPIIEYCGGTELGGGFVTGSL--L-----------Q-----------P--QAFAAFSTPAMGCKL 536 (728)
T ss_pred HHHHHHhcC---C--CCeEeeccChhhCcccccCCC--C-----------C-----------C--CCCCccccCCCCceE
Confidence 555555442 1 358999999997643221110 0 0 0 012459999999999
Q ss_pred EEEcCCCCCCCCCCc--ceEEEEcCC--cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1553 IIANPETKGQCGDSH--LGEIWVQSP--HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1553 ~v~d~~~~~~~p~G~--~GEL~i~g~--~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
+|+|++ ++++|.|+ +|||+|+++ +...+|+| + +.+...|..+|+. ++++||+|||+|++ |+|
T Consensus 537 ~v~d~~-g~~v~~g~~~~GEL~v~~~~~~~~~~~~~---~-~~~~~yf~~~p~~--~g~~~~~tGDl~~~------d~d- 602 (728)
T PLN03052 537 FILDDS-GNPYPDDAPCTGELALFPLMFGASSTLLN---A-DHYKVYFKGMPVF--NGKILRRHGDIFER------TSG- 602 (728)
T ss_pred EEECCC-CCCCCCCCCceEEEEEeCCCCCCCccccC---c-hhhhhhhhcCCCC--CCCEEEecCceEEE------CCC-
Confidence 999955 89999996 599999875 44568887 5 3455566555543 35679999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHH-HhccCcceeEEEee-----C-CeEEEEEEeC---CCch
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVM-RAHKKIAECAVFTW-----T-NLLVVVVELD---GNES 1698 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l-~~~p~V~~a~Vv~~-----~-~~~~a~v~~~---~~~~ 1698 (1761)
|+ ++|+||.||+||++|+||+|.|||+ ++ ..||+|.+|+|++. + +.+++||++. +...
T Consensus 603 -------G~----l~i~GR~Dd~I~~~G~rI~~~EIE~-~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~ 670 (728)
T PLN03052 603 -------GY----YRAHGRADDTMNLGGIKVSSVEIER-VCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSNP 670 (728)
T ss_pred -------Ce----EEEEecCCCEEeeCCEEeCHHHHHH-HHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCCC
Confidence 99 9999999999999999999999999 67 58999999999974 3 5788888875 2333
Q ss_pred hHhhHHHHH----HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1699 EALDLVPLV----TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1699 ~~~~l~~~l----~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+.++|++++ +++ |+ .+++|+.|++++ +||+|+||||+|+.|++.+.+
T Consensus 671 ~~~~L~~~i~~~i~~~-l~-~~~~p~~i~~v~--~lP~T~sGKi~Rr~Lr~~~~~ 721 (728)
T PLN03052 671 DLNELKKIFNSAIQKK-LN-PLFKVSAVVIVP--SFPRTASNKVMRRVLRQQLAQ 721 (728)
T ss_pred CHHHHHHHHHHHHHhh-cC-CccCCCEEEEcC--CCCCCCchHHHHHHHHHHHHh
Confidence 445666655 444 66 788999999999 999999999999999998744
|
|
| >PRK07786 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-59 Score=607.57 Aligned_cols=501 Identities=20% Similarity=0.250 Sum_probs=410.1
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.+.+++++.++|+++|+.+.+ +.+||.||.++++++|.+|. +.|+++|++|+|+++|+ +++
T Consensus 17 ~n~~~~~~~~a~~~~~~~a~~~~~------~~~ty~~l~~~~~~~a~~L~--------~~g~~~g~~V~i~~~~~--~~~ 80 (542)
T PRK07786 17 QNWVNQLARHALMQPDAPALRFLG------NTTTWRELDDRVAALAGALS--------RRGVGFGDRVLILMLNR--TEF 80 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCC------CcccHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHH
Confidence 578999999999999999998765 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCcce-eEE
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPKLT-WFV 234 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~ 234 (1761)
++++|||+++|++++|+++.++.+ ++.++++++++++++++......+..... ..++...+..... +..
T Consensus 81 ~~~~~a~~~~G~~~vpl~~~~~~~-----~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (542)
T PRK07786 81 VESVLAANMLGAIAVPVNFRLTPP-----EIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGY 155 (542)
T ss_pred HHHHHHHHHcCeEEEEcCccCCHH-----HHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCH
Confidence 999999999999999999999876 89999999999999998765433211100 0111111100000 000
Q ss_pred eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCC-CCCCeEEEccCCcchhhhHHH
Q psy14338 235 TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHY-TEGENMVCVLDFKRETGLWHS 313 (1761)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~ 313 (1761)
.+....... .........+++++++|||||||.||||+++|+++.+.+......+++ ..+++++...|++|.+++..
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~- 233 (542)
T PRK07786 156 EDLLAEAGP-AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGS- 233 (542)
T ss_pred HHHhhccCC-CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHH-
Confidence 111111111 111223456789999999999999999999999999988888777887 67889999999999999874
Q ss_pred HHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 314 i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
++.++..|+++++.+.. .++|..+++.|+++++|+++.+| +++..++......... .+||.+++| |++++++++
T Consensus 234 ~~~~l~~G~~~v~~~~~--~~~~~~~~~~i~~~~~t~~~~~P-~~l~~l~~~~~~~~~~-~~lr~i~~g--g~~~~~~~~ 307 (542)
T PRK07786 234 MLPGLLLGAPTVIYPLG--AFDPGQLLDVLEAEKVTGIFLVP-AQWQAVCAEQQARPRD-LALRVLSWG--AAPASDTLL 307 (542)
T ss_pred HHHHHHccCEEEEccCC--CcCHHHHHHHHHHcCCeEEEehH-HHHHHHHhCcccCccC-cceEEEEEC--CCCCCHHHH
Confidence 99999999999997632 46899999999999999999996 4777776654333322 379999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
+.|.+.++. . .++|.||+||++.+++..... .......++|+|++++
T Consensus 308 ~~~~~~~~~--~---~l~~~YG~tE~~~~~~~~~~~----------------------------~~~~~~~~~G~~~~~~ 354 (542)
T PRK07786 308 RQMAATFPE--A---QILAAFGQTEMSPVTCMLLGE----------------------------DAIRKLGSVGKVIPTV 354 (542)
T ss_pred HHHHHHcCC--C---eEEeeecccccccceEecCcc----------------------------cccccCCCccccCCCc
Confidence 999998853 3 499999999998665432211 0012346899999999
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
.++|+|++++ .+|.|++|||+++|+.+++||+++|+.|++.|. ++||+|||++++++||.++++|
T Consensus 355 ~~~i~d~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~-------------~~~~~TGDl~~~~~~g~~~i~G 419 (542)
T PRK07786 355 AARVVDENMN--DVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFA-------------GGWFHSGDLVRQDEEGYVWVVD 419 (542)
T ss_pred eEEEECCCCC--CCcCCCceEEEEEChhhhhhhcCCHHHHHHHhh-------------CCcccccceEEEcCCceEEEEe
Confidence 9999999886 589999999999999999999999999999984 6899999999999999999999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC---CCHHHHHHHHHHHHHHhh
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD---CSEEESFQWMSRVLQAVD 629 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~---~~~~~l~~~l~~~Lp~y~ 629 (1761)
|.||+||++|++|++.|||+.+.+++.+ .+++|++.++ ..++.++++++.... ...++++++++++++.||
T Consensus 420 R~~d~i~~~G~~v~~~eiE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~l~~~~ 494 (542)
T PRK07786 420 RKKDMIISGGENIYCAEVENVLASHPDI-----VEVAVIGRADEKWGEVPVAVAAVRNDDAALTLEDLAEFLTDRLARYK 494 (542)
T ss_pred cccceEEeCCEEECHHHHHHHHHhCCCc-----cEEEEEeccCcccCceEEEEEEECCCCCCCCHHHHHHHHHhhccCCC
Confidence 9999999999999999999999998887 7999998874 456778888887643 467899999999999999
Q ss_pred hcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCC
Q psy14338 630 SIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLH 670 (1761)
Q Consensus 630 ~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~ 670 (1761)
+|..+ +.+++||+|++||++|++|++.+.+....
T Consensus 495 ~P~~i-------~~v~~iP~t~~GKv~r~~L~~~~~~~~~~ 528 (542)
T PRK07786 495 HPKAL-------EIVDALPRNPAGKVLKTELRERYGACVNV 528 (542)
T ss_pred CCCEE-------EEeccCCCCCcccccHHHHHHHHHhhhch
Confidence 99986 45699999999999999999998765443
|
|
| >PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-59 Score=606.79 Aligned_cols=497 Identities=18% Similarity=0.233 Sum_probs=399.7
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
.++++.|...+. .+|+++|+++.+.. ...+.+||+||.++++++|++|.+. |+++|++|+++++|++++++++
T Consensus 24 ~~l~~~l~~~a~-----~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~Val~~~n~~e~~~~~ 97 (547)
T PRK13295 24 RTINDDLDACVA-----SCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARL-GVGRGDVVSCQLPNWWEFTVLY 97 (547)
T ss_pred CCHHHHHHHHHH-----HCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCChHHHHHH
Confidence 456666665554 67999999853321 1237999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH-----HHHHhhh----ccc-cc--ccc---ccCC
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV-----IKLLKSK----EAS-NV--VDI---KSWP 1306 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~-----~~~~~~~----~~~-~~--~~~---~~~~ 1306 (1761)
|||+++|++++|++|.+|.+ ++.+++++++++++|++... .+.+... ... .+ +.. ..+.
T Consensus 98 la~~~~G~~~vpl~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (547)
T PRK13295 98 LACSRIGAVLNPLMPIFRER------ELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFE 171 (547)
T ss_pred HHHHhcCcEEeccccccCHH------HHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHH
Confidence 99999999999999988777 99999999999999998653 1111111 000 00 000 0111
Q ss_pred ccccCCCC---ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccCh
Q psy14338 1307 TILDTDDM---PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGL 1383 (1761)
Q Consensus 1307 ~~~~~~~~---~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 1383 (1761)
.+...... .............++++++|+|||||||.||||+++|+++...+......+++.++++++...+++|.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~ 251 (547)
T PRK13295 172 ALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQT 251 (547)
T ss_pred HHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhh
Confidence 11100000 000000111234678999999999999999999999999999999888889999999999999999988
Q ss_pred hHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEee
Q psy14338 1384 GFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVV 1463 (1761)
Q Consensus 1384 ~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~g 1463 (1761)
+++..++.++..|+++++.+. +++..+++.++++++|++.++|+++..+.... .....++++||.+++|
T Consensus 252 g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~-------~~~~~~~~~l~~~~~~ 320 (547)
T PRK13295 252 GFMYGLMMPVMLGATAVLQDI----WDPARAAELIRTEGVTFTMASTPFLTDLTRAV-------KESGRPVSSLRTFLCA 320 (547)
T ss_pred hHHHHHHHHHHcCCeEEeCCC----CCHHHHHHHHHHcCCcEEEecHHHHHHHHhcc-------cccCCCcccceEEEEe
Confidence 887889999999999998763 78999999999999999999999999987632 2234567899999999
Q ss_pred cCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecc
Q psy14338 1464 AEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLES 1543 (1761)
Q Consensus 1464 Ge~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 1543 (1761)
|+++++ .+.+++.+.+. ..+++.||+||++.++....... ......++
T Consensus 321 G~~l~~-~~~~~~~~~~~------~~~~~~YG~TE~~~~~~~~~~~~-------------------------~~~~~~~~ 368 (547)
T PRK13295 321 GAPIPG-ALVERARAALG------AKIVSAWGMTENGAVTLTKLDDP-------------------------DERASTTD 368 (547)
T ss_pred cCCCCH-HHHHHHHHHhC------CCeEEeccCCCCCCeeeccCCCc-------------------------chhccCcc
Confidence 999999 78888887763 57999999999865443322100 00012358
Q ss_pred ccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCC
Q psy14338 1544 GKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSP 1623 (1761)
Q Consensus 1544 G~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~ 1623 (1761)
|+|+++++++|+|++ ++++|.|+.|||+|+|++++.||++ +|+.|++. .+|||+|||+|++
T Consensus 369 G~~~~~~~v~i~d~~-~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~t~~~----------~~g~~~TGD~~~~----- 429 (547)
T PRK13295 369 GCPLPGVEVRVVDAD-GAPLPAGQIGRLQVRGCSNFGGYLK---RPQLNGTD----------ADGWFDTGDLARI----- 429 (547)
T ss_pred ccccCCcEEEEECCC-CCCCCCCCCCeEEEEcCcccccccC---CccccccC----------CCCCeecceEEEE-----
Confidence 999999999999965 8999999999999999999999999 99988764 2579999999999
Q ss_pred CCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-Cc
Q psy14338 1624 AGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NE 1697 (1761)
Q Consensus 1624 ~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~ 1697 (1761)
++| |+ ++|.||.||+||++|+||+|.|||. ++.+|++|.+|+|++. ++.++++|+... ..
T Consensus 430 -~~~--------g~----l~~~gR~~~~i~~~G~~v~p~~IE~-~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 495 (547)
T PRK13295 430 -DAD--------GY----IRISGRSKDVIIRGGENIPVVEIEA-LLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQS 495 (547)
T ss_pred -cCC--------ce----EEEEeccCCeEEECCEEECHHHHHH-HHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCC
Confidence 999 99 9999999999999999999999999 8999999999999974 457888888643 33
Q ss_pred hhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1698 SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1698 ~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
.+.+++++++++..|+ .||+|..|++++ +||+|++||++|++|++.+.+.
T Consensus 496 ~~~~~l~~~~~~~~l~-~~~~P~~i~~v~--~lP~t~sgK~~r~~L~~~~~~~ 545 (547)
T PRK13295 496 LDFEEMVEFLKAQKVA-KQYIPERLVVRD--ALPRTPSGKIQKFRLREMLRGE 545 (547)
T ss_pred CCHHHHHHHHHhccCc-cccCCcEEEEec--cCCCCCCccccHHHHHHHHhcC
Confidence 4567899999874488 899999999999 9999999999999999988543
|
|
| >PRK06087 short chain acyl-CoA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-59 Score=607.42 Aligned_cols=497 Identities=18% Similarity=0.254 Sum_probs=404.9
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|+++++++||++|+.+.++ +++||+||+++++++|+.|+ +.|+++||+|+++++|+ +++
T Consensus 23 ~~l~~~~~~~~~~~pd~~a~~~~~~-----~~~Ty~~l~~~v~~la~~l~--------~~G~~~gd~V~i~~~n~--~~~ 87 (547)
T PRK06087 23 ASLADYWQQTARAMPDKIAVVDNHG-----ASYTYSALDHAASRLANWLL--------AKGIEPGDRVAFQLPGW--CEF 87 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEcCCC-----CEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHH
Confidence 5799999999999999999986442 48999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc-----Cc----ccc-cccceeccCC-Cc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG-----LP----KTA-AGEVVAFKGW-PK 229 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~-----~~----~~~-~~~~~~~~~~-~~ 229 (1761)
++++|||+++|++++|++|.++.+ ++.++++++++++++++...... +. ... ...++..+.. +.
T Consensus 88 ~~~~lA~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (547)
T PRK06087 88 TIIYLACLKVGAVSVPLLPSWREA-----ELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPA 162 (547)
T ss_pred HHHHHHHHHcCcEEeccchhcCHH-----HHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCC
Confidence 999999999999999999999876 89999999999999997642110 00 000 0011111100 00
Q ss_pred ceeEE-eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchh
Q psy14338 230 LTWFV-TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET 308 (1761)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 308 (1761)
..... .+..... ..........++++++|+|||||||.||||+++|+++..........+++.++|+++.++|++|..
T Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 241 (547)
T PRK06087 163 TSSLSLSQIIADY-EPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHAT 241 (547)
T ss_pred cCccCHHHHhccC-CcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHH
Confidence 00000 0000111 111112235678999999999999999999999999998888888888999999999999999999
Q ss_pred hhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 309 GLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 309 ~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
+++..++.+++.|+++++.+ .+++..+++.|+++++|+++.+|| ++..++........++++||.+++| |+++
T Consensus 242 g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~~~-~~~~~l~~~~~~~~~~~~lr~i~~g--G~~~ 314 (547)
T PRK06087 242 GFLHGVTAPFLIGARSVLLD----IFTPDACLALLEQQRCTCMLGATP-FIYDLLNLLEKQPADLSALRFFLCG--GTTI 314 (547)
T ss_pred HHHHHHHHHHhcCCEEEecC----CCCHHHHHHHHHHcCCCEEeccHH-HHHHHHhccccCCCCCCCeEEEEEc--CCCC
Confidence 98777899999999999988 678999999999999999998876 5555555443445577899999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++++.+.+.+. |++ +++.||+||++.++...... .......++|+
T Consensus 315 ~~~~~~~~~~~----~~~---l~~~YG~TE~~~~~~~~~~~----------------------------~~~~~~~~~G~ 359 (547)
T PRK06087 315 PKKVARECQQR----GIK---LLSVYGSTESSPHAVVNLDD----------------------------PLSRFMHTDGY 359 (547)
T ss_pred CHHHHHHHHHc----CCc---EEEEecccccCCccccCCCc----------------------------chhhcCCcCCc
Confidence 99998887664 554 99999999998665533211 00112457899
Q ss_pred CCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 469 VMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 469 p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
|++++.++|+|++++ ++|.|+.|||+|+|+++++||+++|+.+...|. .++||+|||+|+++++|+
T Consensus 360 ~~~~~~~~i~d~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~------------~~g~~~TGDl~~~~~~g~ 425 (547)
T PRK06087 360 AAAGVEIKVVDEARK--TLPPGCEGEEASRGPNVFMGYLDEPELTARALD------------EEGWYYSGDLCRMDEAGY 425 (547)
T ss_pred cCCCceEEEEcCCCC--CCcCCCcceEEEecccccccccCCHHHHHHHhC------------CCCCcCcCceEEECCCCC
Confidence 999999999998886 589999999999999999999999999998883 368999999999999999
Q ss_pred EEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC---CCCHHHHHHHHH-H
Q psy14338 549 VFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP---DCSEEESFQWMS-R 623 (1761)
Q Consensus 549 l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~---~~~~~~l~~~l~-~ 623 (1761)
++|+||.||+||++|++|+|.+||+.|..++.+ .+++|++.++. .+++++++++... ..+.+++.+++. +
T Consensus 426 l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 500 (547)
T PRK06087 426 IKITGRKKDIIVRGGENISSREVEDILLQHPKI-----HDACVVAMPDERLGERSCAYVVLKAPHHSLTLEEVVAFFSRK 500 (547)
T ss_pred EEEEecchhhhhcCCEEECHHHHHHHHHhCCCe-----eEEEEEecCCCCcCceEEEEEEECCCCCCCCHHHHHHHHHhc
Confidence 999999999999999999999999999998887 79999998754 5788999998754 256678888875 5
Q ss_pred HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 624 VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 624 ~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.|+.||+|..+ ..+++||+|.|||++|++|++.+..
T Consensus 501 ~l~~~~~P~~i-------~~v~~iP~t~sGK~~r~~l~~~~~~ 536 (547)
T PRK06087 501 RVAKYKYPEHI-------VVIDKLPRTASGKIQKFLLRKDIMR 536 (547)
T ss_pred cccccCCCeEE-------EEeccCCCCCCCcCcHHHHHHHHHH
Confidence 79999999987 4459999999999999999987754
|
|
| >TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-58 Score=597.88 Aligned_cols=492 Identities=15% Similarity=0.169 Sum_probs=405.5
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
++.+.|.+.+..+|+++|+...+ +.+||+||.+++.++|+.|. +.|+++|++|+++++++ .+++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~------~~~ty~el~~~~~~~a~~L~--------~~g~~~~~~V~i~~~~~--~~~~ 64 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQG------QELTYQQLKEQSDRLAAFIQ--------KRILPKKSPIIVYGHME--PHML 64 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCC------cEEeHHHHHHHHHHHHHHHH--------HhCCCCCCeEEEEeCCC--HHHH
Confidence 36788999999999999998655 58999999999999999999 88999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCC
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKT 241 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (1761)
+++|||+++|++++|+++.++.+ ++.++++.++++.++++.......... ..+..... +.....
T Consensus 65 ~~~la~~~~G~~~v~~~~~~~~~-----~~~~~~~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~--------~~~~~~ 128 (502)
T TIGR01734 65 VAFLGSIKSGHAYIPVDTSIPSE-----RIEMIIEAAGPELVIHTAELSIDAVGT---QIITLSAL--------EQAETS 128 (502)
T ss_pred HHHHHHHHhCCEEeCCCCcChHH-----HHHHHHHhcCCCEEEecccccccccCC---ceEEchHh--------hhhhhh
Confidence 99999999999999999999876 899999999999999987654332211 11111100 000000
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcC
Q psy14338 242 PKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNG 321 (1761)
Q Consensus 242 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G 321 (1761)
...........+++.++++|||||||.||||+++|+++...+.+....+++..+++++...|++|+.+++. ++.++..|
T Consensus 129 ~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G 207 (502)
T TIGR01734 129 GGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMD-LYPCLASG 207 (502)
T ss_pred cCCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHH-HHHHHHCC
Confidence 00011112346789999999999999999999999999999998888899999999999999999999985 99999999
Q ss_pred cEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhh
Q psy14338 322 MHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQ 401 (1761)
Q Consensus 322 ~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~ 401 (1761)
+++++.+... ..++..+++.+.++++|.+..+|+ ++..++.........++++|.+++| |++++.++.++|.+.++
T Consensus 208 ~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~p~-~~~~~l~~~~~~~~~~~~l~~~~~~--G~~~~~~~~~~~~~~~~ 283 (502)
T TIGR01734 208 GTLHCLDKDI-TNNFKLLFEELPKTGLNVWVSTPS-FVDMCLLDPNFNQENYPHLTHFLFC--GEELPVKTAKALLERFP 283 (502)
T ss_pred CEEEEcCHHH-hcCHHHHHHHHHHcCCeEEEEChh-HHHHHHhccccccccCCcccEEEEc--CCcCCHHHHHHHHHHCC
Confidence 9999988432 468999999999999999999974 6666555444445568899999999 99999999999999875
Q ss_pred hCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCC
Q psy14338 402 SKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMD 481 (1761)
Q Consensus 402 ~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~ 481 (1761)
. . .+++.||+||++...+..... .+........++|+|++|++++|+|++
T Consensus 284 ~--~---~~~~~yG~tE~~~~~~~~~~~-------------------------~~~~~~~~~~~vg~~~~~~~~~i~~~~ 333 (502)
T TIGR01734 284 K--A---TIYNTYGPTEATVAVTSVKIT-------------------------QEILDQYPRLPIGFAKPDMNLFIMDEE 333 (502)
T ss_pred C--c---EEEeCccCCcceEEEEEEEcc-------------------------ccccccCCccccccccCCCEEEEECCC
Confidence 3 3 499999999987543322110 000011234579999999999999999
Q ss_pred CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE
Q psy14338 482 SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV 561 (1761)
Q Consensus 482 ~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki 561 (1761)
+. ++|.|+.|||+|+|+.++.||+++|+.|.+.|..+ ++.+||+|||+|+++++ +++|+||.||+||+
T Consensus 334 ~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~---------~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~ 401 (502)
T TIGR01734 334 GE--PLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSH---------EGQPAYRTGDAGTITDG-QLFYQGRLDFQIKL 401 (502)
T ss_pred CC--CCCCCCeeEEEEccccccccccCCcccchHhheeC---------CCcEEEECCCEEEEECC-EEEEeccccCeEEE
Confidence 86 58999999999999999999999999999988532 23689999999999976 99999999999999
Q ss_pred CCcccChHHHHHHHHhcCCccccccceEEEEEEe--cCCCceEEEEEEeCCCCC------HHHHHHHHHHHHHHhhhcce
Q psy14338 562 TGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIR--VLRDERICVIAEQRPDCS------EEESFQWMSRVLQAVDSIHQ 633 (1761)
Q Consensus 562 ~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~--~~~~~~l~a~v~~~~~~~------~~~l~~~l~~~Lp~y~~P~~ 633 (1761)
+|++|+|.|||+.+.+++.+ .+++|++.. +...+.+++++++..... ..+++++++++||.|++|+.
T Consensus 402 ~G~~v~~~~IE~~l~~~~~v-----~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~ 476 (502)
T TIGR01734 402 HGYRIELEDIEFNLRQSSYI-----ESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRK 476 (502)
T ss_pred CcEEeCHHHHHHHHHcCCCc-----cEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcE
Confidence 99999999999999998887 789888865 345678899988765321 26789999999999999999
Q ss_pred eeeeEEEEeCCCCccCCCCCcccHHHHHHHH
Q psy14338 634 VGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664 (1761)
Q Consensus 634 i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~ 664 (1761)
+ +.++++|+|++||++|++|++.+
T Consensus 477 ~-------~~v~~lP~t~~gKv~r~~l~~~~ 500 (502)
T TIGR01734 477 F-------IYRDQLPLTANGKIDRKALAEEV 500 (502)
T ss_pred E-------EEccccCCCCCCcccHHHHHHhh
Confidence 6 55799999999999999999875
|
This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides. |
| >PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-59 Score=604.09 Aligned_cols=496 Identities=17% Similarity=0.213 Sum_probs=399.3
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
++++++|+++++++|+++|+.+.+.++.. +.+||+||.++++++|+.|. +.|+++|++|+++++|+ .++
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~-~~~ty~~l~~~v~~la~~L~--------~~g~~~~~~v~i~~~n~--~~~ 75 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVV-RRYSYLELNEEINRTANLFY--------SLGIRKGDKVALHLDNC--PEF 75 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCcc-ceeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHH
Confidence 57999999999999999999886643322 68999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc------ccceeccC-CCc-cee
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA------GEVVAFKG-WPK-LTW 232 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~------~~~~~~~~-~~~-~~~ 232 (1761)
++++|||+++|++++|++|.++.+ ++.+++++++++++++++.....+..... ..+..... ... ...
T Consensus 76 ~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (517)
T PRK08008 76 IFCWFGLAKIGAIMVPINARLLRE-----ESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGV 150 (517)
T ss_pred HHHHHHHHHcCeEEEEcCcccCHH-----HHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccc
Confidence 999999999999999999999976 89999999999999998875433222110 00111000 000 000
Q ss_pred EEeccc-cCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhH
Q psy14338 233 FVTEHL-AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLW 311 (1761)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 311 (1761)
...+.. ..............++++++|+|||||||.||||+++|+++............+.++++++.++|++|..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 230 (517)
T PRK08008 151 SSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQC 230 (517)
T ss_pred cCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHH
Confidence 000000 0111111112234678999999999999999999999999986654444445678899999999999987666
Q ss_pred HHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHH
Q psy14338 312 HSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLS 391 (1761)
Q Consensus 312 ~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~ 391 (1761)
..++.++..|+++++.+ .+++..+++.++++++|++.++| +++..++...........++|.+.++ + +++++
T Consensus 231 ~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~l~~~~~~--~-~~~~~ 302 (517)
T PRK08008 231 TAAMAAFSAGATFVLLE----KYSARAFWGQVCKYRATITECIP-MMIRTLMVQPPSANDRQHCLREVMFY--L-NLSDQ 302 (517)
T ss_pred HHHHHHHhcCcEEEEcc----ccCHHHHHHHHHHcCCcEEechH-HHHHHHHhCCCccccccccceeeEEe--c-CCCHH
Confidence 56899999999999988 67899999999999999999996 47777765543333345678888775 3 78899
Q ss_pred HHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCC
Q psy14338 392 SCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP 471 (1761)
Q Consensus 392 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 471 (1761)
...+|.+.+ |.+ ++|.||+||++..++..... ......++|+|++
T Consensus 303 ~~~~~~~~~---~~~---~~~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~~G~~~~ 347 (517)
T PRK08008 303 EKDAFEERF---GVR---LLTSYGMTETIVGIIGDRPG-----------------------------DKRRWPSIGRPGF 347 (517)
T ss_pred HHHHHHHHh---CCe---EEeeccccccccccccCCcc-----------------------------ccccCCccccCCC
Confidence 999999887 443 99999999997544422210 0123458999999
Q ss_pred CcEEEEEeCCCCcccCCCCCceEEEEec---CCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 472 GCIMTVVKMDSPSYLCKTDEVGEICVAS---TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 472 ~~~~~I~d~~~~~~~~p~G~~GEL~i~G---~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
+++++|+|++++ +++.|+.|||+|+| +++++||+++|+.|++.|. .++||+|||+|++++||.
T Consensus 348 g~~~~i~d~~~~--~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~------------~~g~~~TGDl~~~~~~g~ 413 (517)
T PRK08008 348 CYEAEIRDDHNR--PLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLE------------ADGWLHTGDTGYVDEEGF 413 (517)
T ss_pred CcEEEEECCCCC--CCCCCCcceEEEeCCCCcchhhhHhCChHHHhhccc------------CCCCeeccceEEECCCCc
Confidence 999999999886 58999999999998 6999999999999999984 368999999999999999
Q ss_pred EEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHH
Q psy14338 549 VFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVL 625 (1761)
Q Consensus 549 l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~L 625 (1761)
++|+||+||+||++|++|+|.|||+++.+++.+ .+++|++.++. .++.+++++++..+ .+.++++++++++|
T Consensus 414 ~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v-----~~~~v~g~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l 488 (517)
T PRK08008 414 FYFVDRRCNMIKRGGENVSCVELENIIATHPKI-----QDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFAFCEQNM 488 (517)
T ss_pred EEEeecccceEEeCCEEECHHHHHHHHHhCCce-----eeEEEEccCCCCCCceEEEEEEECCCCCCCHHHHHHHHHhhc
Confidence 999999999999999999999999999988877 79999999854 56788999988754 56789999999999
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHH
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECK 661 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~ 661 (1761)
+.|++|..+ +.++++|+|++||++|+.|+
T Consensus 489 ~~~~~P~~~-------~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 489 AKFKVPSYL-------EIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred ccccCCcEE-------EEeccCCCCCccceehhhcC
Confidence 999999986 44699999999999999874
|
|
| >PLN03102 acyl-activating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-58 Score=605.97 Aligned_cols=507 Identities=13% Similarity=0.107 Sum_probs=386.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.++|++.++++|+++|+.+.+ .++||+||+++++++|+.|. +.|+++||+|+|+++|+ ++
T Consensus 13 ~~~~~~~l~~~~~~~p~~~Al~~~~------~~~Ty~eL~~~~~~~a~~L~--------~~Gl~~gd~Vai~~~n~--~e 76 (579)
T PLN03102 13 PLTPITFLKRASECYPNRTSIIYGK------TRFTWPQTYDRCCRLAASLI--------SLNITKNDVVSVLAPNT--PA 76 (579)
T ss_pred cccHHHHHHHHHHhCCCCeEEEECC------cEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCc--HH
Confidence 3568889999999999999998765 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----------ccceeccCCCc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----------GEVVAFKGWPK 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----------~~~~~~~~~~~ 229 (1761)
+++++|||+++|++++||+|.++.+ ++.++++.++++++|+++.....+..... ..++.++....
T Consensus 77 ~~~~~la~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (579)
T PLN03102 77 MYEMHFAVPMAGAVLNPINTRLDAT-----SIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDF 151 (579)
T ss_pred HHHHHHHHHhcCcEEeeccccCCHH-----HHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccc
Confidence 9999999999999999999999876 89999999999999998765433221100 01111111000
Q ss_pred c-----eeEE-eccccCCCCCCC----CCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEE
Q psy14338 230 L-----TWFV-TEHLAKTPKDWA----PQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMV 299 (1761)
Q Consensus 230 ~-----~~~~-~~~~~~~~~~~~----~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l 299 (1761)
. .... .+.......... ......++++++|+|||||||.||||+++|+++..........+.+...++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l 231 (579)
T PLN03102 152 PKRPSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYL 231 (579)
T ss_pred ccCCcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEE
Confidence 0 0000 000000000000 01123578999999999999999999999999765544444455677788999
Q ss_pred EccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEE
Q psy14338 300 CVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLL 379 (1761)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v 379 (1761)
..+|++|..++.. .+.++..|+++++.+ .+++..+++.|+++++|++.++|+ ++..++..........++++.+
T Consensus 232 ~~~pl~h~~g~~~-~~~~~~~g~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~~~~~ 305 (579)
T PLN03102 232 WTLPMFHCNGWTF-TWGTAARGGTSVCMR----HVTAPEIYKNIEMHNVTHMCCVPT-VFNILLKGNSLDLSPRSGPVHV 305 (579)
T ss_pred ecCChhhhcchhH-HHHHHHhcCcEEeec----cCChHHHHHHHHHcCCeEEEeChH-HHHHHHhCcccccCCcccceEE
Confidence 9999999999874 788899999999987 568899999999999999999974 7777776543333345678888
Q ss_pred EecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccC
Q psy14338 380 LVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLT 459 (1761)
Q Consensus 380 ~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 459 (1761)
++| |+++++.+.++|.. + |.+ ++|.||+||++...+........ + ...... ....
T Consensus 306 ~~g--g~~~~~~~~~~~~~-~---g~~---i~~~YG~tE~~~~~~~~~~~~~~---~------------~~~~~~-~~~~ 360 (579)
T PLN03102 306 LTG--GSPPPAALVKKVQR-L---GFQ---VMHAYGLTEATGPVLFCEWQDEW---N------------RLPENQ-QMEL 360 (579)
T ss_pred EEC--CCCCCHHHHHHHHH-c---CCe---EEeecCccccCcccccccccccc---c------------cCCccc-cccc
Confidence 888 89999999888865 4 543 99999999997533221100000 0 000000 0000
Q ss_pred cccccccCCCCCCcEEEEEeCCCCcccCCC--CCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEee
Q psy14338 460 SLTLQDCGQVMPGCIMTVVKMDSPSYLCKT--DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRS 537 (1761)
Q Consensus 460 ~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~--G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrT 537 (1761)
....+..|.|+++ +.|+|.+... ++|. ++.|||+|+|+++++||||+|+.|++.|. ++||||
T Consensus 361 ~~~~g~~~~~~~~--v~i~~~~~~~-~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~-------------~gw~~T 424 (579)
T PLN03102 361 KARQGVSILGLAD--VDVKNKETQE-SVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFK-------------HGWLNT 424 (579)
T ss_pred ccCCCcccccccc--eEEecccccc-ccCCCCCCceEEEEECcchhhhhcCChhhhHhhhc-------------cCceec
Confidence 0112334445544 5666754332 4664 47899999999999999999999999994 689999
Q ss_pred cceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCC----
Q psy14338 538 GLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDC---- 612 (1761)
Q Consensus 538 GDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~---- 612 (1761)
||+|++|+||+++|+||+||+||++|++|+|.|||+.+.+++.| .+++|+++++. .++.++++++...+.
T Consensus 425 GDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V-----~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~ 499 (579)
T PLN03102 425 GDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKV-----LETAVVAMPHPTWGETPCAFVVLEKGETTKE 499 (579)
T ss_pred CceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCc-----ceeEEEeccCccccceeEEEEEecCcccccc
Confidence 99999999999999999999999999999999999999998887 79999999864 578899999876432
Q ss_pred --------CHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 613 --------SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 613 --------~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+..+++++++++||.||+|..+ +.+++||+|++||++|++|++.+.+
T Consensus 500 ~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i-------~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 500 DRVDKLVTRERDLIEYCRENLPHFMCPRKV-------VFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred cccccccccHHHHHHHHHhhcccccCCeEE-------EEcccCCCCCcccccHHHHHHHHHH
Confidence 3568999999999999999986 5569999999999999999987643
|
|
| >PRK07787 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-58 Score=591.00 Aligned_cols=457 Identities=20% Similarity=0.256 Sum_probs=385.2
Q ss_pred HhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHH
Q psy14338 90 YGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIF 169 (1761)
Q Consensus 90 ~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlk 169 (1761)
.++..++++|+.+.+ +++||+||.++++++|..|+ ++++|+++++|+ +++++++|||++
T Consensus 9 ~~~~~~~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~-------------~~~~V~l~~~~~--~~~~~~~la~~~ 67 (471)
T PRK07787 9 VAAAADIADAVRIGG------RVLSRSDLAGAATAVAERVA-------------GARRVAVLATPT--LATVLAVVGALI 67 (471)
T ss_pred hhcccCCceEEEeCC------cEEEHHHHHHHHHHHHHHhc-------------cCCEEEEECCCC--HHHHHHHHHHHh
Confidence 445668999998865 69999999999999999997 369999999999 999999999999
Q ss_pred hCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCC
Q psy14338 170 AGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQP 249 (1761)
Q Consensus 170 aG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (1761)
+|++++|++|..+.+ ++.++++++++++++++..... .. .+..... ... .......
T Consensus 68 ~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~il~~~~~~~--~~-----------~~~~~~~-~~~-----~~~~~~~ 123 (471)
T PRK07787 68 AGVPVVPVPPDSGVA-----ERRHILADSGAQAWLGPAPDDP--AG-----------LPHVPVR-LHA-----RSWHRYP 123 (471)
T ss_pred cCcEEeecCCCCChH-----HHHHHHHhcCCCEEEecCCccc--cc-----------ccceeee-ccc-----cccccCC
Confidence 999999999999876 8999999999999999764110 00 0000000 000 0011112
Q ss_pred CCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCC
Q psy14338 250 RLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPY 329 (1761)
Q Consensus 250 ~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~ 329 (1761)
...+++++||+|||||||.||||+++|+++...+......+++.+++++++.+|++|..+++..++.++..|+++++.+
T Consensus 124 ~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~- 202 (471)
T PRK07787 124 EPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG- 202 (471)
T ss_pred CCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-
Confidence 3467999999999999999999999999999999888888999999999999999999998877999999999999887
Q ss_pred ccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCc
Q psy14338 330 ALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDA 409 (1761)
Q Consensus 330 ~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~ 409 (1761)
.+++..+++.|+ +++|++..+|. ++..++..... ...++++|.+++| |+++++++.++|.+.+ |.+
T Consensus 203 ---~~~~~~~~~~i~-~~~t~~~~~P~-~~~~l~~~~~~-~~~l~~l~~~~~g--g~~~~~~~~~~~~~~~---~~~--- 268 (471)
T PRK07787 203 ---RPTPEAYAQALS-EGGTLYFGVPT-VWSRIAADPEA-ARALRGARLLVSG--SAALPVPVFDRLAALT---GHR--- 268 (471)
T ss_pred ---CCCHHHHHHHHh-hCceEEEcchH-HHHHHHhCccc-cccccceeEEEEC--CCCCCHHHHHHHHHHc---CCC---
Confidence 678999999999 99999999864 77777654322 3457899999999 9999999999999887 443
Q ss_pred cccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCC-
Q psy14338 410 ICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCK- 488 (1761)
Q Consensus 410 l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p- 488 (1761)
++|.||+||++...+.... ....+.++|+|++|++++|+|+++++ ++
T Consensus 269 ~~~~YG~tE~~~~~~~~~~------------------------------~~~~~~~vG~~~~g~~~~i~d~~~~~--~~~ 316 (471)
T PRK07787 269 PVERYGMTETLITLSTRAD------------------------------GERRPGWVGLPLAGVETRLVDEDGGP--VPH 316 (471)
T ss_pred eecccCccccCcceecCCC------------------------------CcccCCcccccCCCcEEEEECCCCCC--CCC
Confidence 9999999999764432221 01235679999999999999999864 65
Q ss_pred CCC-ceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEecc-CCeEEECCccc
Q psy14338 489 TDE-VGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSR-DGLMTVTGRKH 566 (1761)
Q Consensus 489 ~G~-~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~-d~qvki~G~rI 566 (1761)
.|+ +|||+|+|+++++||+++|+.|++.|. .++||+|||+|++++||.++++||+ |++||++|++|
T Consensus 317 ~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~------------~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v 384 (471)
T PRK07787 317 DGETVGELQVRGPTLFDGYLNRPDATAAAFT------------ADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRI 384 (471)
T ss_pred CCCCceEEEEECcccchhhcCChhhchhccc------------CCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEE
Confidence 344 899999999999999999999999984 3689999999999999999999996 89999999999
Q ss_pred ChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCC
Q psy14338 567 NADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPN 645 (1761)
Q Consensus 567 e~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~ 645 (1761)
+|.|||+.|..++.+ .+++|++.++. .++.++++++.....+.+++++++++.|+.|++|..+ +.++
T Consensus 385 ~~~eIE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~l~~~l~~~l~~~~~P~~i-------~~~~ 452 (471)
T PRK07787 385 GAGEIETALLGHPGV-----REAAVVGVPDDDLGQRIVAYVVGADDVAADELIDFVAQQLSVHKRPREV-------RFVD 452 (471)
T ss_pred CHHHHHHHHHhCCCc-----ceEEEEcccccccCeEEEEEEEeCCCCCHHHHHHHHHhhcccccCCcEE-------EEec
Confidence 999999999988777 79999998754 5788999999877788999999999999999999986 4469
Q ss_pred CccCCCCCcccHHHHHH
Q psy14338 646 YLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 646 ~lP~t~~GKidR~~L~~ 662 (1761)
+||+|.+||++|++|++
T Consensus 453 ~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 453 ALPRNAMGKVLKKQLLS 469 (471)
T ss_pred cCCCCCCccccHHHhcc
Confidence 99999999999999975
|
|
| >PRK08314 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-58 Score=604.84 Aligned_cols=495 Identities=18% Similarity=0.236 Sum_probs=404.6
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++.+.|.+.+. ++|+++|+. ..++.+||+||.++++++|+.|.+.+|+++|++|+++++|++++++++|
T Consensus 10 ~tl~~~l~~~a~-----~~~~~~a~~-----~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 79 (546)
T PRK08314 10 TSLFHNLEVSAR-----RYPDKTAIV-----FYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYY 79 (546)
T ss_pred CCHHHHHHHHHH-----HcCCCccee-----ecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHH
Confidence 345555655543 779999999 6678999999999999999999986589999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc---ccccccCCccccC--------
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN---VVDIKSWPTILDT-------- 1311 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------- 1311 (1761)
||+++|++++|++|..+.+ ++.+++++++++++|++......+....... .+...........
T Consensus 80 A~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (546)
T PRK08314 80 AILRANAVVVPVNPMNREE------ELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPA 153 (546)
T ss_pred HHHHcCcEEeecCcCcCHH------HHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccc
Confidence 9999999999999977766 9999999999999999987655443321100 0000000000000
Q ss_pred ----C---------CC------ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCe
Q psy14338 1312 ----D---------DM------PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRH 1372 (1761)
Q Consensus 1312 ----~---------~~------~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 1372 (1761)
. .. .............++++++|+|||||||.||||+++|+++++.+......+++.++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~ 233 (546)
T PRK08314 154 WLRAEPPLQALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESV 233 (546)
T ss_pred ccccccccccccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCce
Confidence 0 00 0000011122346789999999999999999999999999999998888899999999
Q ss_pred EEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCC
Q psy14338 1373 IALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNI 1452 (1761)
Q Consensus 1373 ~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~ 1452 (1761)
++...|++|.+++...++.++.+|+++++.+. +++..+++.++++++|++.++|+++..++.. ......
T Consensus 234 ~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~-------~~~~~~ 302 (546)
T PRK08314 234 VLAVLPLFHVTGMVHSMNAPIYAGATVVLMPR----WDREAAARLIERYRVTHWTNIPTMVVDFLAS-------PGLAER 302 (546)
T ss_pred EEEEcCchHHHHHHHHHHHHHHcCCeEEecCC----CCHHHHHHHHHHhcCceecccHHHHHHHHhC-------CCcccc
Confidence 99999999999987888899999999999884 6899999999999999999999999988652 122345
Q ss_pred CCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceeccc
Q psy14338 1453 ALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVER 1532 (1761)
Q Consensus 1453 ~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1532 (1761)
+++++|.+++||+++++ .+.+++.+.++ ..+++.||+||++..+.....
T Consensus 303 ~~~~l~~~~~gG~~~~~-~~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~------------------------ 351 (546)
T PRK08314 303 DLSSLRYIGGGGAAMPE-AVAERLKELTG------LDYVEGYGLTETMAQTHSNPP------------------------ 351 (546)
T ss_pred CchhhheeeeccccCCH-HHHHHHHHHcC------CcEEecccccccccceecCCC------------------------
Confidence 67899999999999998 78888877653 469999999997654322110
Q ss_pred CCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEee
Q psy14338 1533 GSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYART 1612 (1761)
Q Consensus 1533 ~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrT 1612 (1761)
......++|+|++|++++|+|++++++++.|..|||+|+|++++.||+| +++.|.+.|..+ ++.+||+|
T Consensus 352 ---~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~t~~~f~~~-----~~~~~~~T 420 (546)
T PRK08314 352 ---DRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFKGYWN---RPEATAEAFIEI-----DGKRFFRT 420 (546)
T ss_pred ---cCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhccccC---ChhHhhhhhhhc-----CCCceEec
Confidence 0011245999999999999998778999999999999999999999999 999999998642 35689999
Q ss_pred CceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeE
Q psy14338 1613 GYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLL 1687 (1761)
Q Consensus 1613 GDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~ 1687 (1761)
||+|++ +++ |+ ++++||+||+||++|+||+|.|||+ ++.+||+|.+++|++. ++.+
T Consensus 421 GDl~~~------~~~--------g~----l~~~GR~~d~i~~~G~~v~~~eIE~-~i~~~~~v~~~~v~~~~~~~~~~~~ 481 (546)
T PRK08314 421 GDLGRM------DEE--------GY----FFITDRLKRMINASGFKVWPAEVEN-LLYKHPAIQEACVIATPDPRRGETV 481 (546)
T ss_pred CCEEEE------cCC--------Cc----EEEEecchhhEEeCCEEECHHHHHH-HHHhCcchheEEEEeCCCcccCcee
Confidence 999999 899 99 9999999999999999999999999 8999999999999974 4578
Q ss_pred EEEEEeCCC---chhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1688 VVVVELDGN---ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1688 ~a~v~~~~~---~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+++++.... ..+.++++++|+++ |+ .|++|..+++++ +||+|+|||++|++|++...+
T Consensus 482 ~a~v~~~~~~~~~~~~~~l~~~~~~~-l~-~~~~P~~~~~v~--~iP~t~~GKv~r~~L~~~~~~ 542 (546)
T PRK08314 482 KAVVVLRPEARGKTTEEEIIAWAREH-MA-AYKYPRIVEFVD--SLPKSGSGKILWRQLQEQEKA 542 (546)
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHh-cc-cCCCCcEEEEec--CCCCCCccceeHHHHHHHHhh
Confidence 888887532 23457899999987 88 999999999999 999999999999999887644
|
|
| >PRK05677 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-58 Score=605.78 Aligned_cols=491 Identities=15% Similarity=0.224 Sum_probs=392.5
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHh-hcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLE-RAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~-~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
++++.|...+. ++|+++|++ .+++.+||+||+++++++|+.|.+ . |+++||+|+++++|++++++++|
T Consensus 25 ~~~~~l~~~a~-----~~p~~~al~-----~~~~~~Ty~el~~~~~~la~~L~~~~-gi~~gd~Vai~~~n~~~~~~~~l 93 (562)
T PRK05677 25 NIQAVLKQSCQ-----RFADKPAFS-----NLGKTLTYGELYKLSGAFAAWLQQHT-DLKPGDRIAVQLPNVLQYPVAVF 93 (562)
T ss_pred cHHHHHHHHHH-----hCCCCeeEE-----ECCceeeHHHHHHHHHHHHHHHHHhc-CCCCCCEEEEECCCCHHHHHHHH
Confidence 45556655544 679999999 567899999999999999999987 6 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc---cccccccCCcc-----------
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS---NVVDIKSWPTI----------- 1308 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~~----------- 1308 (1761)
||+++|++++|++|.+|.+ ++.+++++++++++|++......+...... ..+........
T Consensus 94 a~~~~Ga~~v~l~~~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (562)
T PRK05677 94 GAMRAGLIVVNTNPLYTAR------EMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINA 167 (562)
T ss_pred HHHHcCeEEeecCCCCCHH------HHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhccc
Confidence 9999999999999988887 999999999999999987654433321110 00000000000
Q ss_pred --------ccCCCCcc-----------chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC--c
Q psy14338 1309 --------LDTDDMPK-----------KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE--L 1367 (1761)
Q Consensus 1309 --------~~~~~~~~-----------~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~ 1367 (1761)
......+. ...........++++++|+|||||||+||||+++|+++...+......++ +
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~ 247 (562)
T PRK05677 168 VVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNL 247 (562)
T ss_pred chhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCC
Confidence 00000000 00000112346789999999999999999999999999888776665554 3
Q ss_pred CCC-CeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcch
Q psy14338 1368 YPS-RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQ 1446 (1761)
Q Consensus 1368 ~~~-d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~ 1446 (1761)
..+ +.++..+|++|.+++.+.++.++..|++.++.+. .+++..+++.|+++++|+++.+|+++..+++..
T Consensus 248 ~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~------ 318 (562)
T PRK05677 248 NEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISN---PRDLPAMVKELGKWKFSGFVGLNTLFVALCNNE------ 318 (562)
T ss_pred CCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecC---cccHHHHHHHHHHcCceEEecHHHHHHHHHhCc------
Confidence 332 4667788888888887778888899998887764 368999999999999999999999999886521
Q ss_pred hhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCc
Q psy14338 1447 LKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDR 1526 (1761)
Q Consensus 1447 ~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1526 (1761)
.....++++||.+++||+++++ .+.++|.+.++ ..+++.||+||++.++......
T Consensus 319 -~~~~~~~~~lr~v~~gG~~~~~-~~~~~~~~~~~------~~v~~~YG~tE~~~~~~~~~~~----------------- 373 (562)
T PRK05677 319 -AFRKLDFSALKLTLSGGMALQL-ATAERWKEVTG------CAICEGYGMTETSPVVSVNPSQ----------------- 373 (562)
T ss_pred -ccccCChhhceEEEEcCccCCH-HHHHHHHHHcC------CCeeccCCccccCcceeecCcc-----------------
Confidence 1223456799999999999999 78788877653 5799999999976544321100
Q ss_pred ceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCC
Q psy14338 1527 VSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTG 1606 (1761)
Q Consensus 1527 ~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~ 1606 (1761)
....+++|+|+++++++|+|++ ++++|.|+.|||+|+|+.+++||++ +|+.|++.| ..
T Consensus 374 ----------~~~~~~vG~~~~~~~v~i~d~~-~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~t~~~~--------~~ 431 (562)
T PRK05677 374 ----------AIQVGTIGIPVPSTLCKVIDDD-GNELPLGEVGELCVKGPQVMKGYWQ---RPEATDEIL--------DS 431 (562)
T ss_pred ----------CCCCCccCccCCCCEEEEECCC-CCCCCCCCCeEEEEecCccchhhcC---Cchhhhhcc--------CC
Confidence 0112359999999999999965 8899999999999999999999999 999999998 35
Q ss_pred CceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee---
Q psy14338 1607 ELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW--- 1683 (1761)
Q Consensus 1607 ~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~--- 1683 (1761)
+|||+|||+|++ |+| |+ ++|.||+||+||++|++|+|.|||+ ++..||+|.+++|++.
T Consensus 432 ~g~~~TGDlg~~------~~~--------G~----l~i~GR~~d~i~~~G~~i~p~eiE~-~l~~~~~v~~~~v~g~~~~ 492 (562)
T PRK05677 432 DGWLKTGDIALI------QED--------GY----MRIVDRKKDMILVSGFNVYPNELED-VLAALPGVLQCAAIGVPDE 492 (562)
T ss_pred CCcccccceEEE------CCC--------Cc----EEEEecCcCeEEeCCEEECHHHHHH-HHHhCCCccEEEEEeccCc
Confidence 789999999999 999 99 9999999999999999999999999 8999999999999974
Q ss_pred --CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1684 --TNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1684 --~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
++.++++|+.. +...+.++++++++++ |+ .|++|..|++++ +||+|+|||++|++|++.+...
T Consensus 493 ~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-~~~~P~~i~~v~--~iP~t~sGKi~r~~L~~~~~~~ 558 (562)
T PRK05677 493 KSGEAIKVFVVVKPGETLTKEQVMEHMRAN-LT-GYKVPKAVEFRD--ELPTTNVGKILRRELRDEELKK 558 (562)
T ss_pred cCCceEEEEEEeCCCCCCCHHHHHHHHHHh-hh-hccCCcEEEEec--cCCCCCcccccHHHHHHHHHHh
Confidence 45777777754 3456778999999997 88 999999999999 9999999999999999876443
|
|
| >PLN02861 long-chain-fatty-acid-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-59 Score=619.59 Aligned_cols=507 Identities=16% Similarity=0.160 Sum_probs=381.5
Q ss_pred cccccccccccCCCCcCCCCCCCceEEc---cCC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSV---DTR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLI 1238 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~---d~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~i 1238 (1761)
.++++.|.+.+. ++|+++|+... +.. +..+.+||+||.++++++|++|.+. |+++||+|+|+++|+++|+
T Consensus 43 ~t~~~~l~~~~~-----~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~-Gv~~gd~Vai~~~n~~e~~ 116 (660)
T PLN02861 43 DSPWQFFSDAVK-----KYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSR-GVNPGDRCGIYGSNCPEWI 116 (660)
T ss_pred CCHHHHHHHHHH-----hCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHH
Confidence 345566655554 78999999742 221 2235799999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc------cccccccc--------
Q psy14338 1239 CAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA------SNVVDIKS-------- 1304 (1761)
Q Consensus 1239 va~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~------~~~~~~~~-------- 1304 (1761)
+++|||+++|+++|||+|.++.+ ++.+++++++++++|++......+..... ..++....
T Consensus 117 ~~~lA~~~~G~v~vpl~~~~~~~------~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~ 190 (660)
T PLN02861 117 IAMEACNSQGITYVPLYDTLGAN------AVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEE 190 (660)
T ss_pred HHHHHHHHcCCeEEEecCCCCHH------HHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhh
Confidence 99999999999999999987777 99999999999999998766544322110 00111000
Q ss_pred ----------CCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC-----cCC
Q psy14338 1305 ----------WPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE-----LYP 1369 (1761)
Q Consensus 1305 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-----~~~ 1369 (1761)
+..+.... ..........++++|+|+|||||||.||||++||+++++.+......++ +.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~ 265 (660)
T PLN02861 191 AEELGVSCFSWEEFSLMG-----SLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATE 265 (660)
T ss_pred hhcCCcEEEEHHHHHHhC-----cccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCC
Confidence 00000000 0001122346899999999999999999999999999998877666554 467
Q ss_pred CCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcc----
Q psy14338 1370 SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIP---- 1445 (1761)
Q Consensus 1370 ~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~---- 1445 (1761)
+|+++.++|++|.++... .+.+++.|+++++.+ +++..+++.|+++++|+++++|+++..+.+.+...+.
T Consensus 266 ~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~ 339 (660)
T PLN02861 266 EDSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-----GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGM 339 (660)
T ss_pred CCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCH
Confidence 889999999999888754 455899999998874 4789999999999999999999999988642110000
Q ss_pred --------------------------hhhccCC-------CC-CcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccc
Q psy14338 1446 --------------------------QLKARNI-------AL-GCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVS 1491 (1761)
Q Consensus 1446 --------------------------~~~~~~~-------~l-~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~ 1491 (1761)
....... .+ .+||.+++||+++++ ++ .+|.+.+. . ..++
T Consensus 340 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~-~~-~~~~~~~~---~--~~l~ 412 (660)
T PLN02861 340 LRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPR-HV-EEFLRVTS---C--SVLS 412 (660)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCH-HH-HHHHHHHc---C--CCee
Confidence 0000000 11 579999999999998 66 34555442 1 3589
Q ss_pred ccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcC-CCC-CCCCCCcce
Q psy14338 1492 TSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP-ETK-GQCGDSHLG 1569 (1761)
Q Consensus 1492 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~-~~~-~~~p~G~~G 1569 (1761)
+.||+||+++.++..... ...+.+++|+|++|++++|+|. +.+ ..++.+..|
T Consensus 413 ~~YG~TE~~~~~~~~~~~--------------------------~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~G 466 (660)
T PLN02861 413 QGYGLTESCGGCFTSIAN--------------------------VFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRG 466 (660)
T ss_pred Eecchhhhhhceeecccc--------------------------cCCCCCCccCccCceEEEEEEccccCcccCCCCCce
Confidence 999999986543321100 0001346999999999999982 323 455667789
Q ss_pred EEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccC
Q psy14338 1570 EIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALD 1649 (1761)
Q Consensus 1570 EL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~d 1649 (1761)
||+|+||+++.|||| +|+.|++.| .+|||+|||+|++ |+| |+ |+|+||+|
T Consensus 467 Ei~vrGp~v~~GY~~---~pe~T~~~f---------~dGw~~TGDlg~~------d~d--------G~----l~i~GR~k 516 (660)
T PLN02861 467 EICLRGNTLFSGYHK---RQDLTEEVL---------IDGWFHTGDIGEW------QPN--------GA----MKIIDRKK 516 (660)
T ss_pred eEEEcCCcccccccC---CHHHHHhhh---------hccCcccCceEEE------CCC--------Cc----EEEEeccc
Confidence 999999999999999 999999999 2689999999999 999 99 99999999
Q ss_pred CeEEe-CCeecChHHHHHHHHHhccCcceeEEEeeC--CeEEEEEEeCCCch-----------hHh----------hHHH
Q psy14338 1650 ETIML-RGMRYHPIDIENSVMRAHKKIAECAVFTWT--NLLVVVVELDGNES-----------EAL----------DLVP 1705 (1761)
Q Consensus 1650 d~Iki-~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~--~~~~a~v~~~~~~~-----------~~~----------~l~~ 1705 (1761)
|+||+ +|+||+|.|||+ ++.+||.|.+|+|++.+ +.++|+|++..... +.. .+.+
T Consensus 517 d~Ik~~~G~~I~p~eIE~-~l~~~p~V~~a~V~G~~~~~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (660)
T PLN02861 517 NIFKLSQGEYVAVENLEN-TYSRCPLIASIWVYGNSFESFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILD 595 (660)
T ss_pred cceEcCCCeEEcHHHHHH-HHhcCCCeeEEEEEecCCcceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHH
Confidence 99997 799999999999 89999999999999976 57888888642110 001 1222
Q ss_pred HHH----HHHhhhcCceeeEEEEECCCCc-----cCCCchhhhHHHHHHHHHcCCCChhhhhc
Q psy14338 1706 LVT----NAVLEEHHLIVGVAVVVDPGVV-----PINSRGEKQRMHLRDGFLADQLDPIYVAY 1759 (1761)
Q Consensus 1706 ~l~----~~~Lp~~~~vP~~i~~v~~~~l-----P~t~~GKvdR~~L~~~~~~~~~~~~~~~~ 1759 (1761)
.+. +..|+ .|..++.|.++++ .| .+|+++|+.|+.+.+.| +.+++++|...
T Consensus 596 ~~~~~~~~~~l~-~~e~i~~~~l~~~-~ft~~ng~lT~t~K~~R~~i~~~y-~~~I~~lY~~~ 655 (660)
T PLN02861 596 ELNSTGKKLQLR-GFEMLKAIHLEPN-PFDIERDLITPTFKLKRPQLLKYY-KDCIDQLYSEA 655 (660)
T ss_pred HHHHHHHHcCCC-CcceeeEEEEeCC-CCCcccCcCCHHHhhhHHHHHHHH-HHHHHHHHHhh
Confidence 222 11265 7888888888763 56 89999999999999999 66888888753
|
|
| >PRK07008 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-58 Score=600.70 Aligned_cols=512 Identities=18% Similarity=0.203 Sum_probs=400.5
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.++|+..+.++|+++++.+... |. .+.+||.||+++++++|+.|. +.|+++|++|+++++|+ ++
T Consensus 9 ~~~~~~~l~~~~~~~~~~~~~~~~~~-~~-~~~~Ty~el~~~~~~~a~~L~--------~~g~~~~d~v~i~~~~~--~~ 76 (539)
T PRK07008 9 PLLISSLIAHAARHAGDTEIVSRRVE-GD-IHRYTYRDCERRAKQLAQALA--------ALGVEPGDRVGTLAWNG--YR 76 (539)
T ss_pred CCCHHHHHHHHHhhCCCceEEEeecc-Cc-ceEeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCc--HH
Confidence 45789999999999999988875321 21 157999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-----cceeccCC---Cc--
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-----EVVAFKGW---PK-- 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~---~~-- 229 (1761)
+++++|||+++|+++||++|.++.+ ++.++++++++++++++....+.+...... ..+..... +.
T Consensus 77 ~~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (539)
T PRK07008 77 HLEAYYGVSGSGAVCHTINPRLFPE-----QIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGS 151 (539)
T ss_pred HHHHHHHHHhcCcEEeecccccCHH-----HHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCC
Confidence 9999999999999999999999877 899999999999999987654322211000 00000000 00
Q ss_pred ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHH--HHHHHcCCCCCCeEEEccCCcch
Q psy14338 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCR--ALTQACHYTEGENMVCVLDFKRE 307 (1761)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~ 307 (1761)
..+...+.+..............++++++++|||||||.||||+++|++++.... .....+++.++|+++..+|++|.
T Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~ 231 (539)
T PRK07008 152 TPLLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHV 231 (539)
T ss_pred cccccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHh
Confidence 0000001111111111112245678999999999999999999999999875432 33346788899999999999998
Q ss_pred hhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCcc
Q psy14338 308 TGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANP 387 (1761)
Q Consensus 308 ~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~ 387 (1761)
.++.. ++.++..|++++++++ .+++..+++.++++++|++..+|. ++..++........++++||.+++| |++
T Consensus 232 ~~~~~-~~~~l~~G~~~~~~~~---~~~~~~~~~~l~~~~vt~~~~~P~-~~~~l~~~~~~~~~~~~~l~~~~~~--G~~ 304 (539)
T PRK07008 232 NAWGL-PYSAPLTGAKLVLPGP---DLDGKSLYELIEAERVTFSAGVPT-VWLGLLNHMREAGLRFSTLRRTVIG--GSA 304 (539)
T ss_pred hhHHH-HHHHHhcCceEEEecC---CcCHHHHHHHHHHcCCEEEEechH-HHHHHHhcccccCCCcccceEEEEc--CCC
Confidence 77653 6888999999999864 578999999999999999999964 7777776554445678899999999 999
Q ss_pred CCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccC
Q psy14338 388 WSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCG 467 (1761)
Q Consensus 388 l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 467 (1761)
+++++.++|.+.+ |++ +++.||+||++..++........ .... .........++|
T Consensus 305 l~~~~~~~~~~~~---~~~---l~~~YG~tE~~~~~~~~~~~~~~-----------------~~~~--~~~~~~~~~~~G 359 (539)
T PRK07008 305 CPPAMIRTFEDEY---GVE---VIHAWGMTEMSPLGTLCKLKWKH-----------------SQLP--LDEQRKLLEKQG 359 (539)
T ss_pred CCHHHHHHHHHHh---CCc---eecccccccccccceeccccccc-----------------ccCC--chhhhhhcccCC
Confidence 9999999999888 554 99999999998654432210000 0000 000011246799
Q ss_pred CCCCCcEEEEEeCCCCcccCCCC--CceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC
Q psy14338 468 QVMPGCIMTVVKMDSPSYLCKTD--EVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545 (1761)
Q Consensus 468 ~p~~~~~~~I~d~~~~~~~~p~G--~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~ 545 (1761)
+|++|++++|+|+++++ +|.+ ++|||+++|++++.||+++|+ +.|. ++||+|||+|++++
T Consensus 360 ~p~pg~~~~i~d~~~~~--~~~~~~~~Gei~v~g~~~~~gy~~~~~---~~~~-------------~g~~~TGD~~~~~~ 421 (539)
T PRK07008 360 RVIYGVDMKIVGDDGRE--LPWDGKAFGDLQVRGPWVIDRYFRGDA---SPLV-------------DGWFPTGDVATIDA 421 (539)
T ss_pred ccccceEEEEECCCCCc--cCCCCCcceEEEEeCCccchhhcCChh---hhhc-------------CCCcccCceEEEcC
Confidence 99999999999998874 6643 679999999999999999983 3342 67999999999999
Q ss_pred CCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHH
Q psy14338 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMS 622 (1761)
Q Consensus 546 dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~ 622 (1761)
||.++|+||+||+||++|++|+|.|||+.+..++.+ .+++|++.++. .++.++++++..++ .+.++++++++
T Consensus 422 dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 496 (539)
T PRK07008 422 DGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAV-----AEAACIACAHPKWDERPLLVVVKRPGAEVTREELLAFYE 496 (539)
T ss_pred CCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCce-----eEEEEEecCCchhccceEEEEEeCCCCccCHHHHHHHHH
Confidence 999999999999999999999999999999998887 79999998854 56778888876543 56789999999
Q ss_pred HHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCC
Q psy14338 623 RVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLH 670 (1761)
Q Consensus 623 ~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~ 670 (1761)
++|+.|++|..+ +.+++||+|++||++|++|++.+.+..++
T Consensus 497 ~~l~~~~~P~~i-------~~v~~lP~t~sgKi~r~~l~~~~~~~~~~ 537 (539)
T PRK07008 497 GKVAKWWIPDDV-------VFVDAIPHTATGKLQKLKLREQFRDYVLP 537 (539)
T ss_pred hhcccccCCeEE-------EEecCCCCCCccceeHHHHHHHHHhhccc
Confidence 999999999986 55699999999999999999988765544
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-59 Score=637.74 Aligned_cols=510 Identities=14% Similarity=0.155 Sum_probs=387.1
Q ss_pred CCCCCCCCCCCCcCCCCCCcccc----CCCcchhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHH
Q psy14338 53 KDPNAPKPEGGVMTPAPGESLVV----PSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYT 128 (1761)
Q Consensus 53 ~~p~~~~~~~~~l~~~~~~~~~~----~~~~~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~ 128 (1761)
.+|+.+..++.+++..+...+.. ......+++++|+++++++||++|+++.+ +++||+||+++++++|+.
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ll~~~a~~~pd~~Al~~~~------~~lTY~eL~~ra~rlA~~ 488 (994)
T PRK07868 415 VAANRSVRTLAVETARTLPRLARLGQINDHTRISLGRIIAEQARDAPKGEFLLFDG------RVHTYEAVNRRINNVVRG 488 (994)
T ss_pred HHhhhhhHHHHHHHHHhhhhHHHhhhcCCCCCccHHHHHHHHHHHCCCCeEEEeCC------ceeeHHHHHHHHHHHHHH
Confidence 45666666666666555554421 11223579999999999999999998754 589999999999999999
Q ss_pred hhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccc
Q psy14338 129 LLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDA 208 (1761)
Q Consensus 129 L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~ 208 (1761)
|+ +.|+++|++|+|+++|+ +++++++|||+|+|+++||+||. . ++.+++++++++++|++..
T Consensus 489 L~--------~~Gv~~Gd~VaI~~~n~--~e~v~a~lA~~~aGav~vpl~p~---~-----~l~~il~~s~~~~li~~~~ 550 (994)
T PRK07868 489 LI--------AVGVRQGDRVGVLMETR--PSALVAIAALSRLGAVAVLMPPD---T-----DLAAAVRLGGVTEIITDPT 550 (994)
T ss_pred HH--------HcCCCCCCEEEEEcCCC--HHHHHHHHHHHhcCCEEEEeCCc---h-----hHHHHHhccCCeEEEEChH
Confidence 99 88999999999999999 99999999999999999999984 2 7999999999999999876
Q ss_pred ccccCcccccccceeccCCCc--c------eeEEeccccCCC---CCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchH
Q psy14338 209 CLKGLPKTAAGEVVAFKGWPK--L------TWFVTEHLAKTP---KDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRA 277 (1761)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~---~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~ 277 (1761)
..+.+.... ..++.++.... . .....+...... +.........++|+|||+|| ||||+|||+.++|.
T Consensus 551 ~~~~~~~~~-~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~ 628 (994)
T PRK07868 551 NLEAARQLP-GRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNY 628 (994)
T ss_pred HHHHHHhcC-ceEEEecCCccccccCCcchhhhhhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehH
Confidence 544332211 11222111000 0 000000000000 00000112236899999999 57888888888887
Q ss_pred HHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHH
Q psy14338 278 AMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRD 357 (1761)
Q Consensus 278 ~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~ 357 (1761)
+...........++++++|++++++|++|+++++. .+.+++.||+.++..+ .+++..+++.|++++||+++++| +
T Consensus 629 ~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~-~l~~~l~gG~~vvl~~---~~~~~~~~~~I~~~~vT~~~~~P-s 703 (994)
T PRK07868 629 RWALSAFGTASAAALDRRDTVYCLTPLHHESGLLV-SLGGAVVGGSRIALSR---GLDPDRFVQEVRQYGVTVVSYTW-A 703 (994)
T ss_pred HHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHH-HHHHHhccceEEEecC---CCCHHHHHHHHHHhCCcEEEeHH-H
Confidence 76655555566788999999999999999999986 5555555555444443 67999999999999999999996 5
Q ss_pred HHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCC
Q psy14338 358 LHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGR 437 (1761)
Q Consensus 358 ~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~ 437 (1761)
++..++........++++||.++ | | .++++++++|.+.++. . .++|.||+||++++.....
T Consensus 704 ~l~~L~~~~~~~~~~~~slr~~~-g--~-gl~~~l~~~~~~~~~~--~---~l~~~YG~TE~~~~~~~~~---------- 764 (994)
T PRK07868 704 MLREVVDDPAFVLHGNHPVRLFI-G--S-GMPTGLWERVVEAFAP--A---HVVEFFATTDGQAVLANVS---------- 764 (994)
T ss_pred HHHHHHhCcCCccCCCCceEEEe-c--C-CCCHHHHHHHHHHhCc--h---heeeeeecccccccccccC----------
Confidence 88888776544445678999876 3 2 3899999999998852 2 4999999999875432111
Q ss_pred ccccccCcccceeeecCCCccCcccccccCCCCCCc-EEEEE-----------eCCCCcccCCCCCceEEEEecCCcccc
Q psy14338 438 GVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC-IMTVV-----------KMDSPSYLCKTDEVGEICVASTGTGSQ 505 (1761)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~I~-----------d~~~~~~~~p~G~~GEL~i~G~~l~~G 505 (1761)
..+.+++|+|++|+ +++|. |++|....++.|++|||+++|++
T Consensus 765 ----------------------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~---- 818 (994)
T PRK07868 765 ----------------------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARG---- 818 (994)
T ss_pred ----------------------CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCC----
Confidence 12356899999997 66653 45552224789999999999985
Q ss_pred ccCCCcccccc--ccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccc
Q psy14338 506 YWGLPGLSNTT--FKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKF 583 (1761)
Q Consensus 506 Y~~~p~~T~~~--f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~ 583 (1761)
|+ +|+.|..+ |. +++|||||||+|++|+||+|+|+||+|||||++|++|+|+|||++|.+++.|
T Consensus 819 ~~-~p~~t~~~~~~~-----------~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V-- 884 (994)
T PRK07868 819 PI-DPTASVKRGVFA-----------PADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGV-- 884 (994)
T ss_pred CC-ChhhhhHhcccc-----------cCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCe--
Confidence 44 46554433 31 1379999999999999999999999999999999999999999999999888
Q ss_pred cccceEEEEEEecCCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHH
Q psy14338 584 IYRGRIAVFSIRVLRDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECK 661 (1761)
Q Consensus 584 ~~~~~a~v~~~~~~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~ 661 (1761)
.+|+|+++++..++.++|+|++.++ .+.++|+++|++ ||.||+|+.| +.+++||+|+|||++|++|+
T Consensus 885 ---~~aaVvg~~d~~~~~~~a~Vv~~~~~~~~~~~L~~~l~~-l~~y~vP~~i-------~~v~~lP~T~sGKi~r~~L~ 953 (994)
T PRK07868 885 ---DLAVTYGVEVGGRQLAVAAVTLRPGAAITAADLTEALAS-LPVGLGPDIV-------HVVPEIPLSATYRPTVSALR 953 (994)
T ss_pred ---eEEEEEeecCCCCceEEEEEEeCCCCcCCHHHHHHHHHh-CCCCcCCeEE-------EEeCCCCCCccccEehHHHH
Confidence 7999999987767889999987654 678899999986 9999999986 55699999999999999998
Q ss_pred HH
Q psy14338 662 RR 663 (1761)
Q Consensus 662 ~~ 663 (1761)
+.
T Consensus 954 ~~ 955 (994)
T PRK07868 954 AA 955 (994)
T ss_pred hc
Confidence 65
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-59 Score=663.81 Aligned_cols=511 Identities=19% Similarity=0.227 Sum_probs=411.7
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|+++++++|+++|+++.. + +++||+||+++++++|+.|+ + ++++||+|+++++|+ ++
T Consensus 614 ~~~l~~~~~~~a~~~p~~~a~~~~~--~---~~~Ty~el~~~~~~~a~~L~--------~-~~~~g~~V~i~~~n~--~~ 677 (1146)
T PRK08633 614 LPPLAEAWIDTAKRNWSRLAVADST--G---GELSYGKALTGALALARLLK--------R-ELKDEENVGILLPPS--VA 677 (1146)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEcCC--C---CcCcHHHHHHHHHHHHHHHH--------H-hCCCCCeEEEECCCc--hH
Confidence 3578899999999999999998532 2 48999999999999999998 4 489999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc-------cccceeccCCCccee
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA-------AGEVVAFKGWPKLTW 232 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 232 (1761)
+++++|||+++|++++|++|.++.+ ++.+++++++++++++++...+.+.... ...++..++... ..
T Consensus 678 ~~~~~la~~~~G~v~v~l~~~~~~~-----~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 751 (1146)
T PRK08633 678 GALANLALLLAGKVPVNLNYTASEA-----ALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKA-KI 751 (1146)
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCHH-----HHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhcc-cc
Confidence 9999999999999999999999876 8999999999999999877554443110 001111111000 00
Q ss_pred EEecc----ccC--CCC---CCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccC
Q psy14338 233 FVTEH----LAK--TPK---DWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLD 303 (1761)
Q Consensus 233 ~~~~~----~~~--~~~---~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~ 303 (1761)
...+. ... .+. .........++|+++|+|||||||+||||+++|+++.+.+......++++++|+++..+|
T Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p 831 (1146)
T PRK08633 752 SKVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLP 831 (1146)
T ss_pred chhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCc
Confidence 00000 000 000 000013456899999999999999999999999999999998888899999999999999
Q ss_pred CcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecC
Q psy14338 304 FKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGD 383 (1761)
Q Consensus 304 ~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg 383 (1761)
++|..++...++.+++.|+++++.++ .+++..+++.++++++|++..+| +++..++......+.+++++|.+++|
T Consensus 832 ~~h~~g~~~~~~~~l~~g~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~g- 906 (1146)
T PRK08633 832 FFHSFGLTVTLWLPLLEGIKVVYHPD---PTDALGIAKLVAKHRATILLGTP-TFLRLYLRNKKLHPLMFASLRLVVAG- 906 (1146)
T ss_pred HHHHHhHHHHHHHHHHCCCEEEEeCC---CCCHHHHHHHHHHcCCeEEEecH-HHHHHHHhccccCcccCCCeeeEEEc-
Confidence 99999987668999999999999874 57899999999999999999996 57777777555556678999999999
Q ss_pred CCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccc
Q psy14338 384 GANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTL 463 (1761)
Q Consensus 384 ~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1761)
|+++++++.++|.+.+ |.+ ++|.||+||++.+++....+.... ........+.
T Consensus 907 -g~~~~~~~~~~~~~~~---g~~---~~~~YG~tE~~~~~~~~~~~~~~~--------------------~~~~~~~~~~ 959 (1146)
T PRK08633 907 -AEKLKPEVADAFEEKF---GIR---ILEGYGATETSPVASVNLPDVLAA--------------------DFKRQTGSKE 959 (1146)
T ss_pred -CCcCCHHHHHHHHHHh---CCC---eecccccccCcceEEEecCccccc--------------------ccccccCCCC
Confidence 9999999999999988 443 999999999986655432110000 0000011246
Q ss_pred cccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEE
Q psy14338 464 QDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFL 543 (1761)
Q Consensus 464 ~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~ 543 (1761)
.++|+|++|++++|+|+++. .++|.|+.|||+|+|+++++||+|+|+.|++.|... ++++||+|||+|++
T Consensus 960 ~~vG~p~~~~~v~i~d~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~---------~~~~~~~TGD~~~~ 1029 (1146)
T PRK08633 960 GSVGMPLPGVAVRIVDPETF-EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDI---------DGIGWYVTGDKGHL 1029 (1146)
T ss_pred CCccccCCCCEEEEEcCCCC-ccCCCCCceEEEEcCCCccccccCCccchHHHhhcC---------CCCCeEECCCEEEE
Confidence 78999999999999997543 269999999999999999999999999999998532 13699999999999
Q ss_pred eCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHH
Q psy14338 544 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMS 622 (1761)
Q Consensus 544 ~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~ 622 (1761)
|+||+++|+||+||+||++|+||+|.|||++|.+++++. ..+++|++++++ .++.++++++. ...+.++++++++
T Consensus 1030 ~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~---~~~~~v~~~~~~~~g~~~~~~v~~-~~~~~~~l~~~~~ 1105 (1146)
T PRK08633 1030 DEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGE---EVVFAVTAVPDEKKGEKLVVLHTC-GAEDVEELKRAIK 1105 (1146)
T ss_pred cCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCC---CceEEEEeccCCCCCcEEEEEEec-CccCHHHHHHHHH
Confidence 999999999999999999999999999999999987431 157888888854 67888888886 4567788999887
Q ss_pred H-HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 623 R-VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 623 ~-~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+ .+|.|++|..+ +.++++|+|+|||+||++|++...
T Consensus 1106 ~~~l~~~~~P~~i-------~~~~~iP~t~~GKi~r~~L~~~~~ 1142 (1146)
T PRK08633 1106 ESGLPNLWKPSRY-------FKVEALPLLGSGKLDLKGLKELAL 1142 (1146)
T ss_pred hcCCCcccCCcEE-------EEecCcCCCCCCCCcHHHHHHHHH
Confidence 5 69999999986 556999999999999999998754
|
|
| >PRK06187 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-58 Score=601.56 Aligned_cols=501 Identities=18% Similarity=0.262 Sum_probs=417.9
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.+++++|.++++.+|+++|+.+.+ +.+||+||+++++++|+.|. +.|+++|++|+++++|+ .+
T Consensus 5 ~~~l~~~l~~~~~~~p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~--------~~g~~~~~~V~l~~~~~--~~ 68 (521)
T PRK06187 5 PLTIGRILRHGARKHPDKEAVYFDG------RRTTYAELDERVNRLANALR--------ALGVKKGDRVAVFDWNS--HE 68 (521)
T ss_pred cCCHHHHHHHHHHHCCCceEEEeCC------ceEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HH
Confidence 4689999999999999999999876 47999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-----cceeccCCC-----c
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-----EVVAFKGWP-----K 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~-----~ 229 (1761)
+++++|||+++|++++|+++.++.+ ++..+++.+++++++++....+.+...... .++...... .
T Consensus 69 ~~~~~la~~~~G~~~v~~~~~~~~~-----~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (521)
T PRK06187 69 YLEAYFAVPKIGAVLHPINIRLKPE-----EIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAP 143 (521)
T ss_pred HHHHHHHHHHcCeEEEecccCCCHH-----HHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCcccccccc
Confidence 9999999999999999999999876 899999999999999998765443322110 111111100 0
Q ss_pred ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
..+...+...... .........+++++|++|||||||.||+|.++|+++.+...+....+++.++|+++.++|++|..+
T Consensus 144 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 222 (521)
T PRK06187 144 EVGEYEELLAAAS-DTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHA 222 (521)
T ss_pred ccccHHHHhhcCC-ccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhh
Confidence 0000011111111 111233456789999999999999999999999999999988888999999999999999999999
Q ss_pred hHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCC
Q psy14338 310 LWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWS 389 (1761)
Q Consensus 310 ~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~ 389 (1761)
+.. .+.+++.|+++++++ ..++..+++.++++++|+++.+| +++..++........+++++|.+++| |++++
T Consensus 223 ~~~-~~~~l~~G~~~v~~~----~~~~~~~~~~l~~~~~t~l~~~p-~~~~~l~~~~~~~~~~~~~l~~v~~~--Ge~l~ 294 (521)
T PRK06187 223 WGL-PYLALMAGAKQVIPR----RFDPENLLDLIETERVTFFFAVP-TIWQMLLKAPRAYFVDFSSLRLVIYG--GAALP 294 (521)
T ss_pred HHH-HHHHHHhCCEEEecC----CCCHHHHHHHHHHhCCeEEEchH-HHHHHHHcCcCCCccCcchhhEEEEc--CcCCC
Confidence 885 667999999999988 45899999999999999999996 47777776655545678899999999 99999
Q ss_pred HHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCC
Q psy14338 390 LSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQV 469 (1761)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 469 (1761)
.++.+.|.+.+ |.+ ++|.||+||++.++....... ..........++|+|
T Consensus 295 ~~~~~~~~~~~---~~~---v~~~YG~tE~~~~~~~~~~~~------------------------~~~~~~~~~~~~G~~ 344 (521)
T PRK06187 295 PALLREFKEKF---GID---LVQGYGMTETSPVVSVLPPED------------------------QLPGQWTKRRSAGRP 344 (521)
T ss_pred HHHHHHHHHHh---Ccc---hheeeccCccCcccccCCccc------------------------ccccccccCCccccc
Confidence 99999999988 443 999999999986554332110 000001245789999
Q ss_pred CCCcEEEEEeCCCCcccCCC--CCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 470 MPGCIMTVVKMDSPSYLCKT--DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 470 ~~~~~~~I~d~~~~~~~~p~--G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
++++.++|+|++++ ++|. |+.|||+|+|++++.||+++++.+++.|. ++||+|||+|++++||
T Consensus 345 ~~~~~~~i~~~~~~--~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~-------------~~~~~tGD~~~~~~~g 409 (521)
T PRK06187 345 LPGVEARIVDDDGD--ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETID-------------GGWLHTGDVGYIDEDG 409 (521)
T ss_pred cCCeEEEEECCCCC--CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhh-------------CCceeccceEEEcCCC
Confidence 99999999999987 5888 99999999999999999999999999885 5699999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHH
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRV 624 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~ 624 (1761)
.+++.||.|++||++|.+|+|.+||+.+.+++++ .+++|++.++ ..++.++++++...+ .+.+++++++++.
T Consensus 410 ~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~ 484 (521)
T PRK06187 410 YLYITDRIKDVIISGGENIYPRELEDALYGHPAV-----AEVAVIGVPDEKWGERPVAVVVLKPGATLDAKELRAFLRGR 484 (521)
T ss_pred CEEEeecccceEEcCCeEECHHHHHHHHHhCCCc-----eEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHHh
Confidence 9999999999999999999999999999988887 7899998874 457788999887654 5788999999999
Q ss_pred HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 625 LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 625 Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
|+.|++|..+ +.+++||+|++||++|++|++++.++
T Consensus 485 l~~~~~p~~i-------~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 485 LAKFKLPKRI-------AFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred ccCCCCceEE-------EEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 9999999986 55699999999999999999998765
|
|
| >PRK13382 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-59 Score=603.92 Aligned_cols=483 Identities=17% Similarity=0.196 Sum_probs=389.4
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+.+. ++|+++|++ ++++++||+||+++++++|++|.+. |+++|++|+++++|++++++++|
T Consensus 43 ~~~~~~l~~~a~-----~~p~~~a~~-----~~~~~~Ty~el~~~~~~~A~~L~~~-g~~~g~~V~i~~~n~~~~~~~~l 111 (537)
T PRK13382 43 MGPTSGFAIAAQ-----RCPDRPGLI-----DELGTLTWRELDERSDALAAALQAL-PIGEPRVVGIMCRNHRGFVEALL 111 (537)
T ss_pred CCHHHHHHHHHH-----hCCCCeEEE-----eCCCeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEecCcHHHHHHHH
Confidence 356666666664 789999999 5677999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----cccccccCCccccCCCCccc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIKSWPTILDTDDMPKK 1317 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 1317 (1761)
||+++|++++|++|.+|.+ ++.+++++++++++|++......+...... ..+.................
T Consensus 112 A~~~~G~~~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (537)
T PRK13382 112 AANRIGADILLLNTSFAGP------ALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAA 185 (537)
T ss_pred HHHHcCcEEEecCcccCHH------HHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhc
Confidence 9999999999999988887 999999999999999998765544332110 00000000000000000000
Q ss_pred hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCc
Q psy14338 1318 KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGH 1397 (1761)
Q Consensus 1318 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~ 1397 (1761)
. ........+++.++++|||||||+||||+++|+++..........+.+..+++++...|++|.+++ ..++.++..|+
T Consensus 186 ~-~~~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~ 263 (537)
T PRK13382 186 H-AGQRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGF-SQLVLAASLAC 263 (537)
T ss_pred c-CcCCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHH-HHHHHHHhcCc
Confidence 0 000112346789999999999999999999999999888888888888899999999999988887 56889999999
Q ss_pred eEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHH
Q psy14338 1398 HSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFS 1477 (1761)
Q Consensus 1398 ~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~ 1477 (1761)
++++.+ .+++..+++.|+++++|++..+|++++.+++... ......++++||.+++|||++++ .+.+.|.
T Consensus 264 ~~~~~~----~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-----~~~~~~~~~~lr~i~~gG~~l~~-~~~~~~~ 333 (537)
T PRK13382 264 TIVTRR----RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPA-----EVRNRYSGRSLRFAAASGSRMRP-DVVIAFM 333 (537)
T ss_pred EEEECC----CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCc-----hhcccCCccceeEEEEcCCCCCH-HHHHHHH
Confidence 998876 3799999999999999999999999999876321 11223456789999999999999 7878887
Q ss_pred HHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcC
Q psy14338 1478 KLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP 1557 (1761)
Q Consensus 1478 ~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~ 1557 (1761)
+.++ ..+++.||+||++.++..... .. .....++|+|++|++++|+|+
T Consensus 334 ~~~~------~~i~~~YG~TE~~~~~~~~~~------------~~--------------~~~~~~vG~p~~~~~~~i~d~ 381 (537)
T PRK13382 334 DQFG------DVIYNNYNATEAGMIATATPA------------DL--------------RAAPDTAGRPAEGTEIRILDQ 381 (537)
T ss_pred HHcC------CcEEecccccccCcceecChh------------Hh--------------ccCCCCccccCcCcEEEEECC
Confidence 7664 359999999998754432110 00 011245999999999999996
Q ss_pred CCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCc
Q psy14338 1558 ETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSK 1637 (1761)
Q Consensus 1558 ~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~ 1637 (1761)
+ ++++|.|+.|||+|+|++++.||+. +.|. .| .+|||+|||++++ ++| |+
T Consensus 382 ~-~~~~~~g~~GEl~v~g~~~~~gY~~-----~~~~-~~---------~~g~~~TGDl~~~------~~~--------g~ 431 (537)
T PRK13382 382 D-FREVPTGEVGTIFVRNDTQFDGYTS-----GSTK-DF---------HDGFMASGDVGYL------DEN--------GR 431 (537)
T ss_pred C-CCCCCCCCeeEEEEEcCCcccCccc-----cchh-hc---------cCCCEeeCceEEE------eCC--------Cc
Confidence 5 8999999999999999999999974 3343 23 2589999999999 999 99
Q ss_pred ccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHHHHHH
Q psy14338 1638 LHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLVTNAV 1711 (1761)
Q Consensus 1638 ~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l~~~~ 1711 (1761)
++|+||+||+||++|+||+|.|||. ++.+||+|.+|+|++. ++.++++|+... ...+.++++++++++
T Consensus 432 ----l~~~GR~dd~ik~~G~~v~~~eIE~-~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~- 505 (537)
T PRK13382 432 ----LFVVGRDDEMIVSGGENVYPIEVEK-TLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQHVRDN- 505 (537)
T ss_pred ----EEEeccccceeEECCEEECHHHHHH-HHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHHHHHh-
Confidence 9999999999999999999999999 8999999999999974 456888888643 345667899999997
Q ss_pred hhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1712 LEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1712 Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
|+ .|++|..+++++ ++|+|++||++|++|++
T Consensus 506 l~-~~~~P~~i~~v~--~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 506 LA-NYKVPRDIVVLD--ELPRGATGKILRRELQA 536 (537)
T ss_pred cc-CCCCCcEEEEec--cCCCCCCCCCcHHhhCC
Confidence 88 899999999999 99999999999999865
|
|
| >PRK06188 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-58 Score=599.61 Aligned_cols=502 Identities=19% Similarity=0.249 Sum_probs=412.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.++|.++++++|+++|+++.+ +.+||+||.++++++|..|. +.|+++|++|+++++++ ++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~--------~~gv~~~~~V~i~~~~~--~~ 74 (524)
T PRK06188 11 GATYGHLLVSALKRYPDRPALVLGD------TRLTYGQLADRISRYIQAFE--------ALGLGTGDAVALLSLNR--PE 74 (524)
T ss_pred CccHHHHHHHHHHHCCCCeEEEECC------CcccHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HH
Confidence 4579999999999999999998755 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccc-cccCccccc-----ccceeccCCCcceeE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDAC-LKGLPKTAA-----GEVVAFKGWPKLTWF 233 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~ 233 (1761)
+++++|||+++|++++|++|.++.+ ++.+++++++++.+++++.. ......... ..++...........
T Consensus 75 ~~~~~la~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (524)
T PRK06188 75 VLMAIGAAQLAGLRRTALHPLGSLD-----DHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDL 149 (524)
T ss_pred HHHHHHHHHHhCCEEEecccCCCHH-----HHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhH
Confidence 9999999999999999999999876 79999999999999998762 211111000 011111111000000
Q ss_pred EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHH
Q psy14338 234 VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHS 313 (1761)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 313 (1761)
.+....... ........++++++|+|||||||.||||+++|+++.+.+......+++..+++++..+|++|..++.
T Consensus 150 -~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-- 225 (524)
T PRK06188 150 -LAAAAKFGP-APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-- 225 (524)
T ss_pred -HHhhhccCc-ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH--
Confidence 000000011 1111223456799999999999999999999999999999999999999999999999999998864
Q ss_pred HHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 314 i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
++.+++.|+++++.+ ..++..+++.++++++|++..+| +++..++........+++++|.+++| |++++++..
T Consensus 226 ~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~l~~l~~~~~~~~~~l~~lr~~~~g--g~~~~~~~~ 298 (524)
T PRK06188 226 FLPTLLRGGTVIVLA----KFDPAEVLRAIEEQRITATFLVP-TMIYALLDHPDLRTRDLSSLETVYYG--ASPMSPVRL 298 (524)
T ss_pred HHHHHHcCCEEEEcC----CCCHHHHHHHHHHhCCEEEEehH-HHHHHHHhCcCccCCCCcceeEEEEc--CCCCCHHHH
Confidence 688899999999998 67899999999999999999996 57778877665556678999999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
+.|.+.+ |. .+++.||+||++..++..... ...........++|+|++|+
T Consensus 299 ~~~~~~~---~~---~~~~~YG~tE~~~~~~~~~~~------------------------~~~~~~~~~~~~~G~p~~g~ 348 (524)
T PRK06188 299 AEAIERF---GP---IFAQYYGQTEAPMVITYLRKR------------------------DHDPDDPKRLTSCGRPTPGL 348 (524)
T ss_pred HHHHHHh---Cc---hhhheeCccccCCceeecCch------------------------hccccccccCCccccccCCc
Confidence 9998887 43 399999999996544332211 00001123456899999999
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
+++|+|++++ ++|.|+.|||+|+|+.++.||+++++.+++.|. ++||+|||+|++++||.++|+|
T Consensus 349 ~v~i~~~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------~g~~~TGDl~~~~~~g~~~~~G 413 (524)
T PRK06188 349 RVALLDEDGR--EVAQGEVGEICVRGPLVMDGYWNRPEETAEAFR-------------DGWLHTGDVAREDEDGFYYIVD 413 (524)
T ss_pred EEEEEcCCCC--CCCCCCeeEEEEECcchhhhhcCChHHhhhhhc-------------CCceeecceEEEcCCccEEEEe
Confidence 9999999986 589999999999999999999999999998884 6899999999999999999999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhh
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVLQAVDS 630 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~ 630 (1761)
|.|++||++|++|+|.|||+.|.+++.+ .+++|++.++. .++.++++++..+. .+.+++++++++.++.|++
T Consensus 414 R~~~~i~~~G~~i~~~~IE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~ 488 (524)
T PRK06188 414 RKKDMIVTGGFNVFPREVEDVLAEHPAV-----AQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQAHVKERKGSVHA 488 (524)
T ss_pred ccccceecCCEEECHHHHHHHHHhCCCe-----eEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHHhcccCCC
Confidence 9999999999999999999999998887 68999988754 57788898887653 5678999999999999999
Q ss_pred cceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCC
Q psy14338 631 IHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLH 670 (1761)
Q Consensus 631 P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~ 670 (1761)
|..+ +.+++||+|++||++|++|++.+.++.+.
T Consensus 489 p~~i-------~~v~~~P~t~~gKi~r~~L~~~~~~~~~~ 521 (524)
T PRK06188 489 PKQV-------DFVDSLPLTALGKPDKKALRARYWEGRGR 521 (524)
T ss_pred CcEE-------EEecCCCCCccccccHHHHHHHHHhhccc
Confidence 9987 45699999999999999999998776543
|
|
| >PRK06164 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-58 Score=598.76 Aligned_cols=499 Identities=17% Similarity=0.166 Sum_probs=400.0
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|.++++++|+++|+...+ +++||+||.++++++|+.|. +.|+++|++|+++++|+ .+
T Consensus 9 ~~~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~L~~~~~~~a~~L~--------~~g~~~g~~V~i~~~n~--~~ 72 (540)
T PRK06164 9 ADTLASLLDAHARARPDAVALIDED------RPLSRAELRALVDRLAAWLA--------AQGVRRGDRVAVWLPNC--IE 72 (540)
T ss_pred CCCHHHHHHHHHHhCCCCeEEecCC------CcccHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCc--HH
Confidence 3579999999999999999998433 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccccc-----Ccccc------cccceecc-C-
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKG-----LPKTA------AGEVVAFK-G- 226 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~-----~~~~~------~~~~~~~~-~- 226 (1761)
+++++|||+++|++++|++|..+.+ ++.+++++++++++|+++..... +.... ...++... .
T Consensus 73 ~~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (540)
T PRK06164 73 WVVLFLACARLGATVIAVNTRYRSH-----EVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAA 147 (540)
T ss_pred HHHHHHHHHHhCcEEEecCCCCCcH-----HHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCc
Confidence 9999999999999999999999876 89999999999999998764210 10000 00011110 0
Q ss_pred --CCcc-eeEEeccccCCCC---CCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEE
Q psy14338 227 --WPKL-TWFVTEHLAKTPK---DWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVC 300 (1761)
Q Consensus 227 --~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~ 300 (1761)
.+.. ............. .........++++++++|||||||+||||+++|+++.+.+......+++.+++++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~ 227 (540)
T PRK06164 148 DATPAPAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLA 227 (540)
T ss_pred ccCCCCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 0000 0000000000000 000012235689999999999999999999999999999999999999999999999
Q ss_pred ccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEE
Q psy14338 301 VLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLL 380 (1761)
Q Consensus 301 ~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~ 380 (1761)
++|++|.+++.. ++.+|..|+++++.+ .+++..+++.|+++++|+++.+| +++..++... ....+++++|.+.
T Consensus 228 ~~p~~~~~g~~~-~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~p-~~l~~l~~~~-~~~~~~~~l~~~~ 300 (540)
T PRK06164 228 ALPFCGVFGFST-LLGALAGGAPLVCEP----VFDAARTARALRRHRVTHTFGND-EMLRRILDTA-GERADFPSARLFG 300 (540)
T ss_pred cCCchhHHHHHH-HHHHHhcCceEEecC----CCCHHHHHHHHHHhCCeeecCCH-HHHHHHHHhh-cccCCCcceeeee
Confidence 999999999985 999999999999987 67899999999999999999986 4777776652 3345788999887
Q ss_pred ecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCc
Q psy14338 381 VGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTS 460 (1761)
Q Consensus 381 ~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1761)
++| +.+...+..+.+.+. |++ ++|.||+||++.+++..... ....
T Consensus 301 ~~~-~~~~~~~~~~~~~~~----~~~---~~~~YG~tE~~~~~~~~~~~---------------------------~~~~ 345 (540)
T PRK06164 301 FAS-FAPALGELAALARAR----GVP---LTGLYGSSEVQALVALQPAT---------------------------DPVS 345 (540)
T ss_pred ecc-CCcchHHHHHHHhhc----CCc---eecceeeccccceeeccCCC---------------------------CCCc
Confidence 662 345555555544433 443 99999999998765543311 0011
Q ss_pred ccccccCCCC-CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecc
Q psy14338 461 LTLQDCGQVM-PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGL 539 (1761)
Q Consensus 461 ~~~~~iG~p~-~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGD 539 (1761)
....+.|.|+ +++.++|+|+++. .+++.|+.|||||+|++++.||+++|+.|++.|. .++||+|||
T Consensus 346 ~~~~~~g~~~~~~~~~~i~d~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~------------~~~~~~TGD 412 (540)
T PRK06164 346 VRIEGGGRPASPEARVRARDPQDG-ALLPDGESGEIEIRAPSLMRGYLDNPDATARALT------------DDGYFRTGD 412 (540)
T ss_pred ceeccCccccCCCeEEEEecCCCC-cCCCCCCeeEEEEecccccccccCCchhhhhccc------------CCCceecCC
Confidence 2234678886 7999999996544 3689999999999999999999999999999984 368999999
Q ss_pred eEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC--CCHHHH
Q psy14338 540 LGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD--CSEEES 617 (1761)
Q Consensus 540 l~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~--~~~~~l 617 (1761)
+|++++||.++|.||.|++||++|++|+|.|||+.|.+++++ .+++|++.+..+++.+++++++.++ .+.+++
T Consensus 413 l~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~vv~~~~~~~~~~~l 487 (540)
T PRK06164 413 LGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGV-----AAAQVVGATRDGKTVPVAFVIPTDGASPDEAGL 487 (540)
T ss_pred eEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCc-----eeEEEEecCCCCceeEEEEEEeCCCCCCCHHHH
Confidence 999999999999999999999999999999999999998888 7999998875566788999987654 678899
Q ss_pred HHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCC---cccHHHHHHHHHc
Q psy14338 618 FQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLG---GIHLSECKRRFLE 666 (1761)
Q Consensus 618 ~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~G---KidR~~L~~~~~~ 666 (1761)
+++|+++||.|++|..+ +.++.+|+|++| |++|+.|++.+.+
T Consensus 488 ~~~~~~~l~~~~~P~~i-------~~~~~~P~t~~g~~~Ki~r~~L~~~~~~ 532 (540)
T PRK06164 488 MAACREALAGFKVPARV-------QVVEAFPVTESANGAKIQKHRLREMAQA 532 (540)
T ss_pred HHHHHhhcccCcCCcEE-------EEecCCCCCCCCccccccHHHHHHHHHH
Confidence 99999999999999986 556999999999 9999999987653
|
|
| >PRK05850 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-58 Score=602.41 Aligned_cols=547 Identities=22% Similarity=0.338 Sum_probs=391.0
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCC----CceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCc
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPN----GKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDP 157 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~----g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~ 157 (1761)
++.++|++++..+|+++|+.+.+.. |. .+++||+||..+++++|+.|. +.| ++||+|+|+++|+
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~-~~~lty~eL~~~v~~~A~~L~--------~~g-~~gd~V~l~~~n~-- 69 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFIDYEQDPAGV-AETLTWSQLYRRTLNVAEELR--------RHG-STGDRAVILAPQG-- 69 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEEccCCCCCCc-eeeecHHHHHHHHHHHHHHHH--------HhC-CCCCEEEEEcCCc--
Confidence 4778999999999999999875421 21 258999999999999999999 788 6899999999999
Q ss_pred hhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecc
Q psy14338 158 INFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEH 237 (1761)
Q Consensus 158 ~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1761)
+++++++|||+++|+++||+++.++.. +.+++.+++++++++++++++...+.+....... ....... +...+.
T Consensus 70 ~~~~~~~lA~~~~G~v~vpl~~~~~~~--~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~ 143 (578)
T PRK05850 70 LEYIVAFLGALQAGLIAVPLSVPQGGA--HDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQ--PGQSAPP--VIEVDL 143 (578)
T ss_pred ccHHHHHHHHHHcCceEEecCCCCccc--hHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhc--ccccccc--eEeecc
Confidence 999999999999999999999855311 1348999999999999999887554432210000 0000000 000011
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH-cC-----CCCCCeEEEccCCcchhhhH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA-CH-----YTEGENMVCVLDFKRETGLW 311 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~-~~-----~~~~d~~l~~~~~~~~~~~~ 311 (1761)
...............++++|||+|||||||+||||+++|+++.+.+...... +. ...++++++++|++|+++++
T Consensus 144 ~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 223 (578)
T PRK05850 144 LDLDSPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLV 223 (578)
T ss_pred cccccCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhH
Confidence 0000000011223467899999999999999999999999998877665543 22 35678999999999999987
Q ss_pred HHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhc---CCCCCCCCCCceeEEEecCCCccC
Q psy14338 312 HSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLA---TKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 312 ~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~---~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
..++.+++.|+++++.++..+..+|..+++.+.++++++. .+|+..+..+.. .......+++++|.+++| |+++
T Consensus 224 ~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~g--g~~~ 300 (578)
T PRK05850 224 LGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISG--SERV 300 (578)
T ss_pred HHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEEC--cCCC
Confidence 6799999999999998743223479999999999999865 556533333322 112223467899999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++++.++|.+.++..|++...+++.||+||++..+........... ..+.....+.+....... .......++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~--~~g~~~~~~g~ 375 (578)
T PRK05850 301 HPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPES---VRFDYEKLSAGHAKRCET--GGGTPLVSYGS 375 (578)
T ss_pred CHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceE---EEECHHHHhCCceEecCC--CCCceEEeccC
Confidence 9999999999886545543459999999998754433211000000 000000000000000000 00122346788
Q ss_pred CCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccc---cccccCCCccCCCceEeecceEEEeC
Q psy14338 469 VMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKV---TPLLADGTALSQDTYTRSGLLGFLGP 545 (1761)
Q Consensus 469 p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~---~p~~~~g~~~~~~~~yrTGDl~~~~~ 545 (1761)
|. +.+++|+|+++. .+||.|+.|||+|+|+++++|||++|+.|+++|.. +|+... ..++||+|||+|+++
T Consensus 376 p~-~~~~~ivd~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~----~~~~w~~TGDl~~~~- 448 (578)
T PRK05850 376 PR-SPTVRIVDPDTC-IECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGT----PEGPWLRTGDLGFIS- 448 (578)
T ss_pred CC-CCEEEEEcCCCC-cCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccC----CCCCeeeccceeeEE-
Confidence 76 688999997644 26999999999999999999999999999999964 333211 125799999999998
Q ss_pred CCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCC--CH------HHH
Q psy14338 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC--SE------EES 617 (1761)
Q Consensus 546 dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~--~~------~~l 617 (1761)
||+++|+||+||+||++|+||+|.|||++|.+++.+ +++|+++++..++.++++++..+.. +. ..+
T Consensus 449 ~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~------~~~v~~v~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~l 522 (578)
T PRK05850 449 EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG------RVAAISVPDDGTEKLVAIIELKKRGDSDEEAMDRLRTV 522 (578)
T ss_pred CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC------cEEEEEecCCCceEEEEEEEeccccCcchhhhhhHHHH
Confidence 999999999999999999999999999999988775 5788888876778899999876542 22 234
Q ss_pred HHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCC
Q psy14338 618 FQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLH 670 (1761)
Q Consensus 618 ~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~ 670 (1761)
++.+...++.+ ..+.+..+.|+..+.||+|++||++|++|++.+.++.+.
T Consensus 523 ~~~v~~~l~~~---~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~~~ 572 (578)
T PRK05850 523 KREVTSAISKS---HGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDEFT 572 (578)
T ss_pred HHHHHHHHHHH---hCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCCcc
Confidence 44444444432 222233345777779999999999999999999876544
|
|
| >TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-58 Score=597.36 Aligned_cols=498 Identities=18% Similarity=0.247 Sum_probs=409.3
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
+++++|.+.++++|+++|+.+.+ +.+||+||.++++++|+.|+ +.|+++|++|+++++|+ .+++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~------~~~ty~~l~~~v~~~a~~l~--------~~g~~~~~~V~i~~~n~--~~~~ 64 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHD------RTLTYAALSERVLALASGLR--------GLGLARGERVAIYLDKR--LETV 64 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECC------ceeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHHH
Confidence 37889999999999999998755 58999999999999999999 88999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-----cceeccCCC--------
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-----EVVAFKGWP-------- 228 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~-------- 228 (1761)
+++|||+++|++++|+++.++.+ ++..+++.++++++++++.....+...... .++.+.+..
T Consensus 65 ~~~lA~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (515)
T TIGR03098 65 TAMFGAALAGGVFVPINPLLKAE-----QVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGE 139 (515)
T ss_pred HHHHHHHhcCEEEEeCCCCCCHH-----HHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccc
Confidence 99999999999999999999876 899999999999999987654332211110 111111100
Q ss_pred cceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchh
Q psy14338 229 KLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET 308 (1761)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 308 (1761)
...| .+... .... .......++++++|+|||||||.||||+++|+++...+......+++.++|++++++|++|+.
T Consensus 140 ~~~~--~~~~~-~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 215 (515)
T TIGR03098 140 SPSW--PKLLA-LGDA-DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDY 215 (515)
T ss_pred cccH--HHhhc-cccc-cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHh
Confidence 0000 00000 0000 112233568999999999999999999999999999988888888999999999999999999
Q ss_pred hhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 309 GLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 309 ~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
++.. ++.++..|+++++.+ .+++..+.+.++++++|++..+|+ ++..++... ....+++++|.+++| |+++
T Consensus 216 ~~~~-~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~-~~~~~~~~l~~~~~~--g~~l 286 (515)
T TIGR03098 216 GFNQ-LTTAFYVGATVVLHD----YLLPRDVLKALEKHGITGLAAVPP-LWAQLAQLD-WPESAAPSLRYLTNS--GGAM 286 (515)
T ss_pred HHHH-HHHHHHcCCEEEEcC----CCCHHHHHHHHHHcCCceEecChH-HHHHHHhcc-cCCCCccceEEEEec--CCcC
Confidence 9985 999999999999987 678999999999999999999975 777766542 223467899999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++++.+.|.+.++. . .+++.||+||++..+...+.. ...++.++|+
T Consensus 287 ~~~~~~~~~~~~~~--~---~~~~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~vG~ 332 (515)
T TIGR03098 287 PRATLSRLRSFLPN--A---RLFLMYGLTEAFRSTYLPPEE-----------------------------VDRRPDSIGK 332 (515)
T ss_pred CHHHHHHHHHHCCC--C---eEeeeeccccccceEeccccc-----------------------------ccCCCCCcce
Confidence 99999999998742 2 499999999997544432210 0124678999
Q ss_pred CCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 469 VMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 469 p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
|++|++++|+|+++. +++.|+.|||+++|+.++.||+++++.|++.|..++...++ ...+++||+|||+|++++||+
T Consensus 333 ~~~~~~~~i~~~~~~--~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~TGD~~~~~~~g~ 409 (515)
T TIGR03098 333 AIPNAEVLVLREDGS--ECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGE-LHLPELAVWSGDTVRRDEEGF 409 (515)
T ss_pred ecCCCEEEEECCCCC--CCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCcccc-ccccccceeccceEEEcCCce
Confidence 999999999998886 58999999999999999999999999999999876542111 112367999999999999999
Q ss_pred EEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCC--CCCHHHHHHHHHHHH
Q psy14338 549 VFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRP--DCSEEESFQWMSRVL 625 (1761)
Q Consensus 549 l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~--~~~~~~l~~~l~~~L 625 (1761)
+++.||.||+||++|++|+|.|||+.+.+++.+ .+++|++.++ ..++.++++++... ..+.++++++++++|
T Consensus 410 l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~l 484 (515)
T TIGR03098 410 LYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLV-----AEAVAFGVPDPTLGQAIVLVVTPPGGEELDRAALLAECRARL 484 (515)
T ss_pred EEEEeccccceecCCEEeCHHHHHHHHhcCCCe-----eEEEEEeccCcccCceEEEEEEeCCCCCCCHHHHHHHHHhhC
Confidence 999999999999999999999999999988877 7999999885 36788888888543 367889999999999
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
+.||+|..+ +.+++||+|++||++|++|++
T Consensus 485 ~~~~~p~~i-------~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 485 PNYMVPALI-------HVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred ccccCCCEE-------EEeccCCCCCCCCCcHHHhcc
Confidence 999999986 556999999999999999864
|
This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present. |
| >PRK09088 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-58 Score=591.82 Aligned_cols=480 Identities=17% Similarity=0.204 Sum_probs=395.8
Q ss_pred HHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHH
Q psy14338 88 QRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGC 167 (1761)
Q Consensus 88 ~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAv 167 (1761)
+.+++.+||++|+.+... + +.+||+||.++++++|+.|+ +.|+++|++|+++++|+ +++++++|||
T Consensus 2 ~~~a~~~p~~~a~~~~~~-~---~~~ty~~l~~~v~~~a~~l~--------~~g~~~~~~v~i~~~~~--~~~~~~~la~ 67 (488)
T PRK09088 2 AFHARLQPQRLAAVDLAL-G---RRWTYAELDALVGRLAAVLR--------RRGCVDGERLAVLARNS--VWLVALHFAC 67 (488)
T ss_pred chhhhhCCCceEEEecCC-C---cEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHHHHHHHHH
Confidence 456788999999986322 2 58999999999999999999 88999999999999999 9999999999
Q ss_pred HHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCC
Q psy14338 168 IFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAP 247 (1761)
Q Consensus 168 lkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1761)
+++|++++|+++.++.+ ++.+++++++++++|+++....... ..+..+.. .+...... ...
T Consensus 68 ~~~G~~~v~~~~~~~~~-----~~~~~~~~~~~~~ii~~~~~~~~~~-----~~~~~~~~-------~~~~~~~~--~~~ 128 (488)
T PRK09088 68 ARVGAIYVPLNWRLSAS-----ELDALLQDAEPRLLLGDDAVAAGRT-----DVEDLAAF-------IASADALE--PAD 128 (488)
T ss_pred HHcCeEEEeeCccCCHH-----HHHHHHHhCCCCEEEEcchhhcccc-----cccchhhh-------hhhccccc--ccc
Confidence 99999999999999876 8999999999999999875432110 00000000 00000000 011
Q ss_pred CCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEe
Q psy14338 248 QPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYI 327 (1761)
Q Consensus 248 ~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~ 327 (1761)
.....++++++++|||||||+||||+++|+++...+..+.....+..+|++++.+|++|.+++...++.++..|+++++.
T Consensus 129 ~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~ 208 (488)
T PRK09088 129 TPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVS 208 (488)
T ss_pred CCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEc
Confidence 12345789999999999999999999999999988888877778889999999999999999887678889999999987
Q ss_pred CCccccCCHHHHHHHHH--hcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCC
Q psy14338 328 PYALMKVNPASWMQMIT--KYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGL 405 (1761)
Q Consensus 328 ~~~~~~~~~~~l~~~i~--~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~ 405 (1761)
+ .+++..++..+. ++++|+++.+| +++..+..........+++||.+++| |++++....++|.+. |+
T Consensus 209 ~----~~~~~~~~~~~~~~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~l~~~~~g--G~~~~~~~~~~~~~~----g~ 277 (488)
T PRK09088 209 N----GFEPKRTLGRLGDPALGITHYFCVP-QMAQAFRAQPGFDAAALRHLTALFTG--GAPHAAEDILGWLDD----GI 277 (488)
T ss_pred C----CCCHHHHHHHHHhhccCCcEEeeHH-HHHHHHHhCcCcCccccccceEEEec--CCCCCHHHHHHHHHh----CC
Confidence 7 578888888886 48999999986 57777776554445567899999999 999999988888764 54
Q ss_pred CCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcc
Q psy14338 406 RPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485 (1761)
Q Consensus 406 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~ 485 (1761)
+ +++.||+||++.+....... .....+.+++|+|+++++++|+|++++
T Consensus 278 ~---v~~~YG~TE~~~~~~~~~~~---------------------------~~~~~~~~~vG~~~~~~~~~i~d~~~~-- 325 (488)
T PRK09088 278 P---MVDGFGMSEAGTVFGMSVDC---------------------------DVIRAKAGAAGIPTPTVQTRVVDDQGN-- 325 (488)
T ss_pred c---eeeeecccccccccccCCCc---------------------------ccccccCCccccCCCCcEEEEECCCCC--
Confidence 4 99999999997543221100 000123568999999999999998886
Q ss_pred cCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcc
Q psy14338 486 LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRK 565 (1761)
Q Consensus 486 ~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~r 565 (1761)
++|.|+.|||+|+|++++.||+|+++.|++.|. +++||+|||+|++++||.++|+||+||+||++|++
T Consensus 326 ~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~------------~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~ 393 (488)
T PRK09088 326 DCPAGVPGELLLRGPNLSPGYWRRPQATARAFT------------GDGWFRTGDIARRDADGFFWVVDRKKDMFISGGEN 393 (488)
T ss_pred CCcCCCceEEEEECCccchhhcCChhhhhhhhc------------CCCCeeecceEEEcCCCcEEEeccccceEEeCCEE
Confidence 589999999999999999999999999998883 37899999999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEe
Q psy14338 566 HNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALV 642 (1761)
Q Consensus 566 Ie~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v 642 (1761)
|+|.|||+.|..++.+ .+++|+++++. .++..+++++..++ .+.++++++++++|+.|++|..+ .
T Consensus 394 i~~~~iE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i-------~ 461 (488)
T PRK09088 394 VYPAEIEAVLADHPGI-----RECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTRLAKYKVPKHL-------R 461 (488)
T ss_pred ECHHHHHHHHHhCCCc-----ceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCCEE-------E
Confidence 9999999999998887 79999998753 56778888887654 46789999999999999999986 4
Q ss_pred CCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 643 PPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 643 ~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
.+++||+|++||++|++|++++.+.
T Consensus 462 ~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 462 LVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred EcccCCCCCCCceeHHHHHHHHHhc
Confidence 5699999999999999999987653
|
|
| >PRK09192 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-58 Score=601.01 Aligned_cols=541 Identities=24% Similarity=0.386 Sum_probs=406.9
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|+..++++|+.+++ .. +++..+.+||+||+.+++++|++|+ +.|+++|++|+++++|+ ++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~Ty~eL~~~~~~~a~~L~--------~~gi~~gd~V~l~~~n~--~~ 86 (579)
T PRK09192 20 FPTLVEALDYAALGEAGMNFY-DR--RGQLEEALPYQTLRARAEAGARRLL--------ALGLKPGDRVALIAETD--GD 86 (579)
T ss_pred hhhHHHHHHHhhccCCceEEE-ec--CCCEEEEecHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCc--hh
Confidence 468999999999988755443 22 2333368999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcC--ccchhHHHHHHhcCCCcEEEEcccccccCcccccc-cceeccCCCcceeEEec
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRR--DAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-EVVAFKGWPKLTWFVTE 236 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~--~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (1761)
+++++|||+++|++++|+|+..+.. ..+.+++.+++++++++++|+++.....+...... ...... . .+
T Consensus 87 ~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-----~---~~ 158 (579)
T PRK09192 87 FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVL-----S---HA 158 (579)
T ss_pred HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccccccee-----e---hh
Confidence 9999999999999999998765421 12245899999999999999988754433221100 000000 0 01
Q ss_pred cccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH-HcCCCCCCeEEEccCCcchhhhHHHHH
Q psy14338 237 HLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ-ACHYTEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
.+..............+++++||+|||||||.||||+++|++++..+..... .+++.++|+++.++|++|+++++..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~ 238 (579)
T PRK09192 159 WFKALPEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLL 238 (579)
T ss_pred hhcccCCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHH
Confidence 1111111111123356789999999999999999999999999998888877 789999999999999999999987677
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC----CCCCCCCCCceeEEEecCCCccCCHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT----KDHKDISLSSLRLLLVGDGANPWSLS 391 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~----~~~~~~~l~~Lr~v~~gg~Ge~l~~~ 391 (1761)
.++..|+++++.+...+..+|..+++.+.++++|++.. |+ +...++.. ......+++++|.+++| |+++++.
T Consensus 239 ~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~-~~-~~~~l~~~~~~~~~~~~~~l~~lr~~~~g--G~~l~~~ 314 (579)
T PRK09192 239 TPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYS-PP-FGYELCARRVNSKDLAELDLSCWRVAGIG--ADMIRPD 314 (579)
T ss_pred HHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeC-Cc-HHHHHHHHhhccccccccchhhhheeEec--CccCCHH
Confidence 88999999988764332347899999999999987665 44 44333321 11223567899999999 9999999
Q ss_pred HHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecC-CCccCcccccccCCCC
Q psy14338 392 SCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQ-ENSLTSLTLQDCGQVM 470 (1761)
Q Consensus 392 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~iG~p~ 470 (1761)
+.++|.+.++..|++...+++.||+||++.+.+..+......... .....+......... ..........++|+|+
T Consensus 315 ~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 391 (579)
T PRK09192 315 VLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEE---VDRDRLEYQGKAVAPGAETRRVRTFVNCGKAL 391 (579)
T ss_pred HHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEE---EcHHHhcCCceeeccCCCCccceeEeecCCcC
Confidence 999999988655544345999999999986555433210000000 000000000000000 0000011245899999
Q ss_pred CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEE
Q psy14338 471 PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVF 550 (1761)
Q Consensus 471 ~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~ 550 (1761)
+|++++|+|++++ .++.|+.|||+|+|+++++|||++ +.|.+.|. .++||+|||+|++ +||+++
T Consensus 392 p~~~v~i~d~~~~--~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~------------~dgw~~TGDlg~~-~~G~l~ 455 (579)
T PRK09192 392 PGHEIEIRNEAGM--PLPERVVGHICVRGPSLMSGYFRD-EESQDVLA------------ADGWLDTGDLGYL-LDGYLY 455 (579)
T ss_pred CCcEEEEECCCCC--CCCCCCEEEEEecCCchhhhhcCC-cccccccc------------CCceeeccceeeE-ECCEEE
Confidence 9999999999886 589999999999999999999999 67777763 3789999999999 899999
Q ss_pred EEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC--CCHHHHHHHHHHHHH-H
Q psy14338 551 VCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD--CSEEESFQWMSRVLQ-A 627 (1761)
Q Consensus 551 ~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp-~ 627 (1761)
|+||+||+||++|+||+|.|||+.|.+++.|. ..+|+|++.++..++.++++++...+ .+.+++++++++.++ .
T Consensus 456 ~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~---~~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~ 532 (579)
T PRK09192 456 ITGRAKDLIIINGRNIWPQDIEWIAEQEPELR---SGDAAAFSIAQENGEKIVLLVQCRISDEERRGQLIHALAALVRSE 532 (579)
T ss_pred EEeccccEEEECCCccCHHHHHHHHHhcCCcc---CCcEEEEEeccCCCeeEEEEEEecCCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988872 01788999887666688888876543 456789999999985 6
Q ss_pred hhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCCcc
Q psy14338 628 VDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPA 672 (1761)
Q Consensus 628 y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~~~ 672 (1761)
|++|..+ .|+..++||+|++||++|++|++.+..+.+...
T Consensus 533 ~~~~~~i-----~~~~~~~lP~t~~GKv~R~~l~~~~~~~~~~~~ 572 (579)
T PRK09192 533 FGVEAAV-----ELVPPHSLPRTSSGKLSRAKAKKRYLSGAFASL 572 (579)
T ss_pred hCCCceE-----EEeCCCCcCCCCCcchhHHHHHHHHHcCCCCcc
Confidence 8888875 466667999999999999999999998887654
|
|
| >TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-58 Score=608.43 Aligned_cols=491 Identities=16% Similarity=0.147 Sum_probs=375.0
Q ss_pred CCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCC
Q psy14338 1181 APVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQ 1260 (1761)
Q Consensus 1181 ~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~ 1260 (1761)
.++++|+++.+.....+++||+||.++++++|+.|++. |+++||+|+++++|++++++++|||+++|++++|++|.++.
T Consensus 97 ~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~ 175 (652)
T TIGR01217 97 AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRAL-GVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGA 175 (652)
T ss_pred CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCH
Confidence 36889998766544567899999999999999999999 99999999999999999999999999999999999998777
Q ss_pred CccCChHHHHHHHHhcCCeEEEechhH---------HHHHhhhcc-----ccccccccCC----------ccccCCCCcc
Q psy14338 1261 NLQTTLPTVRMIVDVSKSVLVLSNQNV---------IKLLKSKEA-----SNVVDIKSWP----------TILDTDDMPK 1316 (1761)
Q Consensus 1261 ~~~~~~~rl~~il~~~~~~~vl~~~~~---------~~~~~~~~~-----~~~~~~~~~~----------~~~~~~~~~~ 1316 (1761)
+ ++.+++++++++++|+++.. ...+..... ..++...... ......+...
T Consensus 176 ~------~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (652)
T TIGR01217 176 R------GVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDLEDFTA 249 (652)
T ss_pred H------HHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCcccHHHHHh
Confidence 7 99999999999999997643 122211110 0011000000 0000000000
Q ss_pred --chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHH-HHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHh
Q psy14338 1317 --KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVT-SLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSV 1393 (1761)
Q Consensus 1317 --~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L 1393 (1761)
...........+++++||+|||||||+||||+++|++++ +.+......+++.++|+++...++.|... ..++.+|
T Consensus 250 ~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~l 327 (652)
T TIGR01217 250 AAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW--NWLVSGL 327 (652)
T ss_pred cccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh--HHHHHHH
Confidence 000011123456899999999999999999999999965 45556666788999998888777766542 2366899
Q ss_pred hcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHH
Q psy14338 1394 YSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473 (1761)
Q Consensus 1394 ~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~ 1473 (1761)
+.|+++++.+......++..+++.++++++|++..+|++++.+... ........++++||.+++|||++++ ++.
T Consensus 328 ~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~-----~~~~~~~~~l~sLr~i~~gGe~l~~-~~~ 401 (652)
T TIGR01217 328 ATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKA-----GVHPARTHDLSALQCVASTGSPLPP-DGF 401 (652)
T ss_pred hcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhc-----CCCccccCChhheeEEEeecCCCCH-HHH
Confidence 9999999987432234789999999999999998888888777541 0011234678999999999999999 787
Q ss_pred HHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEE
Q psy14338 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVI 1553 (1761)
Q Consensus 1474 ~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 1553 (1761)
+++.+.+.. ...+.+.||+||++...... ... .+ ...+++|.|.+|++++
T Consensus 402 ~~~~~~~~~----~~~~~~~yG~TE~~~~~~~~---~~~---------------------~~--~~~g~~g~p~~g~~v~ 451 (652)
T TIGR01217 402 RWVYDEIKA----DVWLASISGGTDICSCFAGA---NPT---------------------LP--VHIGEIQAPGLGTAVQ 451 (652)
T ss_pred HHHHHHhCC----CceEEeccCHHHHhccccCC---CCC---------------------CC--CcCCccCCCcCCCceE
Confidence 887776642 23567899999953211100 000 00 1124589999999999
Q ss_pred EEcCCCCCCCCCCcceEEEEcCC--cccccccCCCCChhhhH--HHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1554 IANPETKGQCGDSHLGEIWVQSP--HNASGYFSLYGDESEYA--QQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1554 v~d~~~~~~~p~G~~GEL~i~g~--~v~~GY~~~~~~p~~t~--~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
|+|++ ++++ .|+.|||+|+|| +++.|||| +|+.|. +.| |. ..+|||+|||+|++ |+|
T Consensus 452 ivd~~-g~~~-~g~~GEl~v~gp~p~~~~gy~~---~~~~t~~~~~~----~~--~~~g~~~tGDlg~~------d~d-- 512 (652)
T TIGR01217 452 SWDPE-GKPV-TGEVGELVCTNPMPSMPIRFWN---DPDGSKYRDAY----FD--TYPGVWRHGDWITL------TPR-- 512 (652)
T ss_pred EECCC-CCCC-CCCccEEEEecCCCccccceeC---CCccchhHHhh----hc--CCCCEEEcCCcEEE------CCC--
Confidence 99966 7788 599999999996 68999999 988654 222 11 23579999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC-chh---H
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN-ESE---A 1700 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~-~~~---~ 1700 (1761)
|+ |+|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.+++||++... ..+ .
T Consensus 513 ------G~----l~i~GR~dd~I~~~G~ri~p~EIE~-~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~ 581 (652)
T TIGR01217 513 ------GG----IVIHGRSDSTLNPQGVRMGSAEIYN-AVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALL 581 (652)
T ss_pred ------Cc----EEEEecccCeEecCCEEcCHHHHHH-HHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHH
Confidence 99 9999999999999999999999999 8999999999999985 4578999987532 222 3
Q ss_pred hhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1701 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1701 ~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
++|+++|+++ |+ .|++|+.|++++ +||+|+||||+|+.|++.+.+.
T Consensus 582 ~~l~~~~~~~-l~-~~~~P~~i~~v~--~lP~T~sGKi~r~~Lr~~~~~~ 627 (652)
T TIGR01217 582 DRIKRTIRAG-LS-PRHVPDEIIEVP--GIPHTLTGKRVEVAVKRVLQGT 627 (652)
T ss_pred HHHHHHHHhh-CC-CCcCCCEEEECC--CCCCCCCccChHHHHHHHHcCC
Confidence 5899999987 88 899999999999 9999999999999999987544
|
This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway. |
| >PRK09274 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-58 Score=601.52 Aligned_cols=495 Identities=17% Similarity=0.224 Sum_probs=377.4
Q ss_pred CCCCCCCceEEccCCC-----CceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEe
Q psy14338 1179 AGAPVPPGVSSVDTRS-----AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVT 1253 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~-----~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vp 1253 (1761)
+++|+++|++..+... ..+.+||+||.++++++|++|.+. |+++||+|+++++|++++++++|||+++|++++|
T Consensus 17 ~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~-g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 17 QERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAA-GIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVL 95 (552)
T ss_pred HhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEE
Confidence 3679999998532210 113899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCccCChHHHHHHHHhcCCeEEEech--hHHHHHhhhc---cccccccc--------cCCccccCCCCccchhh
Q psy14338 1254 IRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQ--NVIKLLKSKE---ASNVVDIK--------SWPTILDTDDMPKKKLA 1320 (1761)
Q Consensus 1254 ldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~--~~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~~ 1320 (1761)
++|.+|.+ ++.+++++++++++|+++ .....+.... ....+... .+..+... .....
T Consensus 96 l~~~~~~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~ 165 (552)
T PRK09274 96 VDPGMGIK------NLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRD----GAAAP 165 (552)
T ss_pred cCCCccHH------HHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhccc----Ccccc
Confidence 99987777 999999999999999865 2222221110 00011000 01111000 00001
Q ss_pred hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEE
Q psy14338 1321 ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSI 1400 (1761)
Q Consensus 1321 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~v 1400 (1761)
.......+++++||+|||||||.||||+++|+++.+.+......+++.++++.+..+|++|. .++..|++++
T Consensus 166 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~--------~~~~~g~~~~ 237 (552)
T PRK09274 166 FPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFAL--------FGPALGMTSV 237 (552)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHh--------hhhhhCCeEE
Confidence 11223467899999999999999999999999999999999999999999888777665432 2345688888
Q ss_pred EeCCC---ccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHH
Q psy14338 1401 LIPPS---EVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFS 1477 (1761)
Q Consensus 1401 l~~~~---~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~ 1477 (1761)
+.+.. ...+++..+++.|+++++|+++++|++++.|.+.. .....++++||.+++||+++++ .+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------~~~~~~~~~lr~~~~gG~~~~~-~~~~~~~ 309 (552)
T PRK09274 238 IPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYG-------EANGIKLPSLRRVISAGAPVPI-AVIERFR 309 (552)
T ss_pred ecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHh-------hhcCCCCchhhEEEecCCcCCH-HHHHHHH
Confidence 76421 11368999999999999999999999999997642 2234578899999999999999 8888888
Q ss_pred HHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcC
Q psy14338 1478 KLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP 1557 (1761)
Q Consensus 1478 ~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~ 1557 (1761)
+.|+. ...+++.||+||++.++....... +.... .........++|+|++|++++|+|+
T Consensus 310 ~~~~~----~~~~~~~YG~TE~~~~~~~~~~~~-----------~~~~~------~~~~~~~~~~vG~~~~~~~~~ivd~ 368 (552)
T PRK09274 310 AMLPP----DAEILTPYGATEALPISSIESREI-----------LFATR------AATDNGAGICVGRPVDGVEVRIIAI 368 (552)
T ss_pred HHcCC----CceEEccccccccceeEeecchhh-----------hcccc------ccccCCCCcccCccCCCceEEEEec
Confidence 87742 157999999999876544221100 00000 0000011235999999999999995
Q ss_pred C--------CCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1558 E--------TKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1558 ~--------~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
+ +++++|.|++|||+|+|++++.|||| +|+.|...|..++ ++.+||+|||+|++ |+|
T Consensus 369 ~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~---~~~~t~~~~~~~~----~g~~w~~TGDlg~~------d~d-- 433 (552)
T PRK09274 369 SDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYN---RPEATRLAKIPDG----QGDVWHRMGDLGYL------DAQ-- 433 (552)
T ss_pred cccccccccccccCCCCCeeEEEEecCcccccccC---ChHHhhhhhcccC----CCCcEEEcCCEEEE------ccC--
Confidence 2 36789999999999999999999999 9999999886432 12359999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC----CeEEEEEEeCC-CchhHhhHH
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT----NLLVVVVELDG-NESEALDLV 1704 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~----~~~~a~v~~~~-~~~~~~~l~ 1704 (1761)
|+ |+|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++.. +.++++|+... ...+.++++
T Consensus 434 ------G~----l~~~GR~~d~i~~~G~~v~p~eIE~-~l~~~p~V~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 502 (552)
T PRK09274 434 ------GR----LWFCGRKAHRVETAGGTLYTIPCER-IFNTHPGVKRSALVGVGVPGAQRPVLCVELEPGVACSKSALY 502 (552)
T ss_pred ------Cc----EEEEeccCCeEEECCEEECcHHHHH-HHHhCcccceeEEEEeCCCCCceEEEEEEccCccccchHHHh
Confidence 99 9999999999999999999999999 99999999999999753 36777777643 333444566
Q ss_pred HHHHHHHhh--hcCceeeEEEEECCCCccCC--CchhhhHHHHHHHHHcC
Q psy14338 1705 PLVTNAVLE--EHHLIVGVAVVVDPGVVPIN--SRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1705 ~~l~~~~Lp--~~~~vP~~i~~v~~~~lP~t--~~GKvdR~~L~~~~~~~ 1750 (1761)
++|++. +. +.++.|..+++++ +||+| +||||||++|++++.+.
T Consensus 503 ~~l~~~-l~~~~~~~~~~~~~~~~--~lP~t~~~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 503 QELRAL-AAAHPHTAGIERFLIHP--SFPVDIRHNAKIFREKLAVWAAKQ 549 (552)
T ss_pred hhhHHH-HHhcCCCcceeEEeccC--CCCccccccccccHHHHHHHHHHh
Confidence 666653 44 1456888999999 99999 79999999999987543
|
|
| >PRK08180 feruloyl-CoA synthase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-58 Score=606.42 Aligned_cols=506 Identities=17% Similarity=0.166 Sum_probs=382.9
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.++|+++++++|+++|+.+.+..+. .+++||+||.++++++|+.|. +.|+++||+|+++++|+ ++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~-~~~~Ty~el~~~v~~~A~~L~--------~~Gv~~gd~Vai~~~n~--~e 106 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERGADGG-WRRLTYAEALERVRAIAQALL--------DRGLSAERPLMILSGNS--IE 106 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeeccCCCc-eeEeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEecCCC--HH
Confidence 56899999999999999999987532222 268999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccc--cccCccccc--ccceeccCCC-cce-eE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDAC--LKGLPKTAA--GEVVAFKGWP-KLT-WF 233 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~--~~~~~~~~~--~~~~~~~~~~-~~~-~~ 233 (1761)
|++++|||+++|+++||++|.++......+++.+++++++++++|+++.. ...+..... ..++...... ... ..
T Consensus 107 ~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 186 (614)
T PRK08180 107 HALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATP 186 (614)
T ss_pred HHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCccccc
Confidence 99999999999999999999998322223489999999999999997531 111111100 0111111100 000 00
Q ss_pred EeccccCCCCC--CCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCC--CCCeEEEccCCcchhh
Q psy14338 234 VTEHLAKTPKD--WAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYT--EGENMVCVLDFKRETG 309 (1761)
Q Consensus 234 ~~~~~~~~~~~--~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~ 309 (1761)
..+........ ........++|+|+|+|||||||+||||++||+++++.+......+++. .++++++++|++|.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g 266 (614)
T PRK08180 187 FAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFG 266 (614)
T ss_pred HHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhh
Confidence 01111110000 0111234689999999999999999999999999999888877777764 5689999999999999
Q ss_pred hHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC----CCCCCCCCCceeEEEecCCC
Q psy14338 310 LWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT----KDHKDISLSSLRLLLVGDGA 385 (1761)
Q Consensus 310 ~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~----~~~~~~~l~~Lr~v~~gg~G 385 (1761)
++..++.+|+.|+++++.+......++..+++.++++++|+++++| +++..++.. .......+++||.+++| |
T Consensus 267 ~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP-~~~~~l~~~~~~~~~~~~~~~~~lr~v~~g--G 343 (614)
T PRK08180 267 GNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVP-KGWEMLVPALERDAALRRRFFSRLKLLFYA--G 343 (614)
T ss_pred HHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechH-HHHHHHHHHHHhchhhhhhhccceeEEEEc--c
Confidence 8656889999999999976310012345778899999999999996 477666542 12223457899999999 9
Q ss_pred ccCCHHHHHHHHHHhhh-CCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCccccc
Q psy14338 386 NPWSLSSCDQFLSVFQS-KGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQ 464 (1761)
Q Consensus 386 e~l~~~~~~~~~~~~~~-~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1761)
+++++++.++|.+.+.. .|.. ..+++.||+||++.+++..... ....+
T Consensus 344 a~l~~~~~~~~~~~~~~~~g~~-~~l~~~YG~TE~~~~~~~~~~~------------------------------~~~~~ 392 (614)
T PRK08180 344 AALSQDVWDRLDRVAEATCGER-IRMMTGLGMTETAPSATFTTGP------------------------------LSRAG 392 (614)
T ss_pred CCCCHHHHHHHHHHHHhhcCCC-ceeeeeecccccCCceEecccc------------------------------cCCCC
Confidence 99999999999875321 0210 1389999999998655432210 12356
Q ss_pred ccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEE-
Q psy14338 465 DCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFL- 543 (1761)
Q Consensus 465 ~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~- 543 (1761)
++|+|++|++++|+|++ ..|||+|+|++++.||||+|+.|++.|. ++|||||||+|++
T Consensus 393 svG~p~pg~~v~i~d~~---------~~GEi~vrg~~v~~GY~~~p~~t~~~~~------------~dgw~~TGDlg~~~ 451 (614)
T PRK08180 393 NIGLPAPGCEVKLVPVG---------GKLEVRVKGPNVTPGYWRAPELTAEAFD------------EEGYYRSGDAVRFV 451 (614)
T ss_pred cccCccCCcEEEEecCC---------CCcEEEEecCccchhhcCChhHhHhhcc------------cCCceeccceEEec
Confidence 89999999999998753 3599999999999999999999999983 3799999999999
Q ss_pred ---eCCCeEEEEeccCCeEEE-CCcccC--hHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC------
Q psy14338 544 ---GPGGLVFVCGSRDGLMTV-TGRKHN--ADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD------ 611 (1761)
Q Consensus 544 ---~~dG~l~~~GR~d~qvki-~G~rIe--~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~------ 611 (1761)
|+||+|+|+||+||+||+ +|++|+ +.|||..+.+++.| .+|+|++.+ .+.++|+|++.++
T Consensus 452 ~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V-----~~a~V~g~~---~~~~~a~V~~~~~~~~~~~ 523 (614)
T PRK08180 452 DPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLV-----QDVVITGHD---RDEIGLLVFPNLDACRRLA 523 (614)
T ss_pred CCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchh-----heEEEEcCC---CCceEEEEEcCHHHHHHHH
Confidence 468999999999999996 598776 77888877788777 799999985 3468888887643
Q ss_pred -----------CCHHHHHHHHHHHHHHhh--------hcceeeeeEEEEeCCCCccCCCCC------cccHHHHHHHHHc
Q psy14338 612 -----------CSEEESFQWMSRVLQAVD--------SIHQVGLYCLALVPPNYLPKTPLG------GIHLSECKRRFLE 666 (1761)
Q Consensus 612 -----------~~~~~l~~~l~~~Lp~y~--------~P~~i~~~~v~~v~~~~lP~t~~G------KidR~~L~~~~~~ 666 (1761)
.+.+++++++++.|..|+ +|.++ +.++++|+|++| |+.|+++.+.|++
T Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~-------~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~ 596 (614)
T PRK08180 524 GLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARA-------LLLDEPPSLDAGEITDKGYINQRAVLARRAA 596 (614)
T ss_pred hhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEE-------EEecCCCCCccCccCccccccHHHHHHHhHH
Confidence 355779999999999999 78775 445888887655 5677777777653
|
|
| >PRK06710 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-58 Score=600.66 Aligned_cols=498 Identities=19% Similarity=0.272 Sum_probs=399.2
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
++++++|.+.++++|+++|+++.+ +.+||+||.++++++|+.|. +.|+++|++|+++++|+ .++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~------~~~ty~eL~~~~~~la~~L~--------~~gv~~gd~V~i~~~~~--~~~ 87 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLG------KDITFSVFHDKVKRFANYLQ--------KLGVEKGDRVAIMLPNC--PQA 87 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecC------eeecHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--hHH
Confidence 579999999999999999998755 68999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----ccceec--cC---CCcce
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----GEVVAF--KG---WPKLT 231 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~--~~---~~~~~ 231 (1761)
++++|||+++|++++|++|.++.+ ++.++++.++++++++++.....+..... ..++.. .. .+...
T Consensus 88 ~~~~lA~~~~G~~~vpi~p~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (563)
T PRK06710 88 VIGYYGTLLAGGIVVQTNPLYTER-----ELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNL 162 (563)
T ss_pred HHHHHHHHHcCeEEeccCcccCHH-----HHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEecccccccccccc
Confidence 999999999999999999999876 89999999999999998754332211100 000000 00 00000
Q ss_pred -----------eE-E---------eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH-H
Q psy14338 232 -----------WF-V---------TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ-A 289 (1761)
Q Consensus 232 -----------~~-~---------~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~-~ 289 (1761)
.. . .+................++++||++|||||||.||||+++|+++......... .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~ 242 (563)
T PRK06710 163 LYPFVQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWL 242 (563)
T ss_pred ccchhhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhc
Confidence 00 0 000000000000011123579999999999999999999999999765433322 3
Q ss_pred cCCCC-CCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCC
Q psy14338 290 CHYTE-GENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDH 368 (1761)
Q Consensus 290 ~~~~~-~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~ 368 (1761)
++... ++++++++|++|.+++...++.+++.|+++++.+ .+++..+++.|+++++|++.++|+ ++..++.....
T Consensus 243 ~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~ 317 (563)
T PRK06710 243 YNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIP----KFDMKMVFEAIKKHKVTLFPGAPT-IYIALLNSPLL 317 (563)
T ss_pred cCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcC----CCCHHHHHHHHHHcCCeEEeccHH-HHHHHHcCCcc
Confidence 44444 4588999999999888655678999999999987 678999999999999999999964 77777765544
Q ss_pred CCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccc
Q psy14338 369 KDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYG 448 (1761)
Q Consensus 369 ~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 448 (1761)
...++++||.+++| |+++++++.++|.+.+ |.+ ++|.||+||++.++......
T Consensus 318 ~~~~~~~lr~v~~g--g~~~~~~~~~~~~~~~---~~~---~~~~YG~tE~~~~~~~~~~~------------------- 370 (563)
T PRK06710 318 KEYDISSIRACISG--SAPLPVEVQEKFETVT---GGK---LVEGYGLTESSPVTHSNFLW------------------- 370 (563)
T ss_pred ccCChhhhhheeeC--CCcCCHHHHHHHHHhh---CCC---EecccccccCccccccCccc-------------------
Confidence 45567899999999 9999999999998877 443 99999999998654422110
Q ss_pred eeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCc
Q psy14338 449 VVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTA 528 (1761)
Q Consensus 449 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~ 528 (1761)
.....+++|+|++++.++|+|++.. .++|.|+.|||+|+|+.+++||+++|+.|++.|.
T Consensus 371 ----------~~~~~~~~G~~~~~~~~~i~~~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~---------- 429 (563)
T PRK06710 371 ----------EKRVPGSIGVPWPDTEAMIMSLETG-EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQ---------- 429 (563)
T ss_pred ----------ccccCCccCCCCCCCeEEEEECCCC-ccCCCCCceEEEEecCccchhhhCChHHHhhhcc----------
Confidence 0112468999999999999995544 3699999999999999999999999999998884
Q ss_pred cCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEE
Q psy14338 529 LSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAE 607 (1761)
Q Consensus 529 ~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~ 607 (1761)
++||+|||+|++++||.++++||.||+||++|.||+|.|||+.|.+++.+ .+++|++.++. .++.++++++
T Consensus 430 ---~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~v~ 501 (563)
T PRK06710 430 ---DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKV-----QEVVTIGVPDPYRGETVKAFVV 501 (563)
T ss_pred ---cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcce-----eeEEEEccccCCcCceeEEEEE
Confidence 68999999999999999999999999999999999999999999998888 79999998854 5778889888
Q ss_pred eCCC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 608 QRPD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 608 ~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
..++ .+.++++++++++|+.|++|..+ ..+++||+|++||++|++|++.+...
T Consensus 502 ~~~~~~~~~~~l~~~~~~~l~~~~~P~~~-------~~v~~iP~t~~GKi~r~~L~~~~~~~ 556 (563)
T PRK06710 502 LKEGTECSEEELNQFARKYLAAYKVPKVY-------EFRDELPKTTVGKILRRVLIEEEKRK 556 (563)
T ss_pred ECCCCCCCHHHHHHHHHHhcccccCCcEE-------EEcccCCCCccchhhHHHHHHHHhhc
Confidence 7654 57889999999999999999876 55699999999999999999987643
|
|
| >PRK07638 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-58 Score=589.67 Aligned_cols=467 Identities=14% Similarity=0.200 Sum_probs=383.7
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
+++|+++|+. +.++++||.||.++++++|++|.+. |. +|++|+|+++|++++++++|||+++|++++|++|..
T Consensus 12 ~~~p~~~a~~-----~~~~~~Ty~~l~~~~~~~a~~L~~~-~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~ 84 (487)
T PRK07638 12 SLQPNKIAIK-----ENDRVLTYKDWFESVCKVANWLNEK-ES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDIKW 84 (487)
T ss_pred HhCCCCeEEe-----cCCcEeeHHHHHHHHHHHHHHHHHh-CC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccC
Confidence 4789999999 6778999999999999999999998 74 899999999999999999999999999999999977
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEecc
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSV 1338 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 1338 (1761)
+.+ ++.++++.++++++|++......+.... ..++....+........ ..........+++++|+|||
T Consensus 85 ~~~------~~~~~~~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TS 152 (487)
T PRK07638 85 KQD------ELKERLAISNADMIVTERYKLNDLPDEE-GRVIEIDEWKRMIEKYL-----PTYAPIENVQNAPFYMGFTS 152 (487)
T ss_pred CHH------HHHHHHHhCCCCEEEEecccccchhhcc-ceEEEehhhhhhhhhcc-----ccccccccCCCCcEEEEeCC
Confidence 666 9999999999999999876543332211 11111111111111000 00011112346789999999
Q ss_pred CCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHH
Q psy14338 1339 STTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418 (1761)
Q Consensus 1339 GSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i 1418 (1761)
||||.||||+++|++++..+......+++.++|+++...+++|..++ ..++.++..|+++++.+. +++..+++.|
T Consensus 153 GtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i 227 (487)
T PRK07638 153 GSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLMRK----FIPNQVLDKL 227 (487)
T ss_pred CCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEcCC----CCHHHHHHHH
Confidence 99999999999999999999888888999999999988888887665 678899999999999874 7999999999
Q ss_pred HhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccc
Q psy14338 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498 (1761)
Q Consensus 1419 ~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE 1498 (1761)
+++++|+++++|+++..+.+. .. ...+.+.++++|++++. .+.+++.+.++. ..+++.||+||
T Consensus 228 ~~~~~t~~~~~P~~~~~l~~~----------~~-~~~~~~~~~~~G~~l~~-~~~~~~~~~~~~-----~~~~~~YG~tE 290 (487)
T PRK07638 228 ETENISVMYTVPTMLESLYKE----------NR-VIENKMKIISSGAKWEA-EAKEKIKNIFPY-----AKLYEFYGASE 290 (487)
T ss_pred HHcCCeEEEeCcHHHHHHHhC----------cC-cCCceeEEEEcCCCCCH-HHHHHHHHHcCC-----CeEEEEecCCc
Confidence 999999999999999999762 11 23455667889999988 777888877642 67999999999
Q ss_pred cceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcc
Q psy14338 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHN 1578 (1761)
Q Consensus 1499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v 1578 (1761)
++.++...... ...+..++|+|++|++++|+|++ ++++|.|+.|||+|+|+.+
T Consensus 291 ~~~~~~~~~~~--------------------------~~~~~~~~G~~~~~~~~~i~d~~-g~~~~~g~~Gel~v~~~~~ 343 (487)
T PRK07638 291 LSFVTALVDEE--------------------------SERRPNSVGRPFHNVQVRICNEA-GEEVQKGEIGTVYVKSPQF 343 (487)
T ss_pred cCceEEecccc--------------------------cCCCCCCCCcccCCcEEEEECCC-CCCCCCCCCeEEEEecccc
Confidence 87654332110 00123469999999999999965 8999999999999999999
Q ss_pred cccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCee
Q psy14338 1579 ASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMR 1658 (1761)
Q Consensus 1579 ~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~r 1658 (1761)
+.||++ +++.+.+.+ .+|||+|||+|++ |+| |+ ++++||+||+||++|++
T Consensus 344 ~~gy~~---~~~~~~~~~---------~~g~~~TGDl~~~------d~~--------g~----l~i~GR~~d~i~~~G~~ 393 (487)
T PRK07638 344 FMGYII---GGVLARELN---------ADGWMTVRDVGYE------DEE--------GF----IYIVGREKNMILFGGIN 393 (487)
T ss_pred eeeecC---CHHHHhhhc---------cCCcEecCccEeE------cCC--------Ce----EEEEecCCCeEEeCCEE
Confidence 999999 998877654 5789999999999 999 99 99999999999999999
Q ss_pred cChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCC
Q psy14338 1659 YHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPIN 1733 (1761)
Q Consensus 1659 I~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t 1733 (1761)
|+|.|||+ ++.+||+|.+|+|++. ++.++++|.. ....++++++|+++ |+ .|++|..+++++ +||+|
T Consensus 394 v~~~eiE~-~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~---~~~~~~l~~~~~~~-l~-~~~~p~~i~~v~--~iP~t 465 (487)
T PRK07638 394 IFPEEIES-VLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG---SATKQQLKSFCLQR-LS-SFKIPKEWHFVD--EIPYT 465 (487)
T ss_pred ECHHHHHH-HHHhCCCeeeEEEEecCchhcCCeeEEEEEC---CCCHHHHHHHHHHH-hh-cccCCcEEEEec--ccCCC
Confidence 99999999 8999999999999974 4567777763 34667899999987 88 899999999999 99999
Q ss_pred CchhhhHHHHHHHHHcCC
Q psy14338 1734 SRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1734 ~~GKvdR~~L~~~~~~~~ 1751 (1761)
++||++|++|++.+.+.+
T Consensus 466 ~~GKv~r~~L~~~~~~~~ 483 (487)
T PRK07638 466 NSGKIARMEAKSWIENQE 483 (487)
T ss_pred CcccccHHHHHHHHhccc
Confidence 999999999999885543
|
|
| >PLN02387 long-chain-fatty-acid-CoA ligase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-58 Score=614.33 Aligned_cols=513 Identities=14% Similarity=0.145 Sum_probs=379.1
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEE---------CCCC--------ceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVL---------DPNG--------KLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLK 143 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~---------d~~g--------~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~ 143 (1761)
.|+.++|++.++++||++|+.+. +.+| .+.+.+||+||+++++++|+.|. +.|++
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~--------~lG~~ 129 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLV--------ALGHN 129 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHH--------HhCCC
Confidence 68999999999999999999542 1111 11245999999999999999999 88999
Q ss_pred CCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc-----c
Q psy14338 144 SGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA-----A 218 (1761)
Q Consensus 144 ~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~-----~ 218 (1761)
+||+|+|+++|+ ++|++++|||+++|+++|||++.++.+ ++.+++++++++++|++......+.... .
T Consensus 130 ~gd~Vai~~~n~--~e~~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l 202 (696)
T PLN02387 130 KEERVAIFADTR--AEWLIALQGCFRQNITVVTIYASLGEE-----ALCHSLNETEVTTVICDSKQLKKLIDISSQLETV 202 (696)
T ss_pred CCCEEEEEcCCC--HHHHHHHHHHHHcCCeEEEecCCCCHH-----HHHHHHHccCCCEEEECHHHHHHHHHHhhccCCc
Confidence 999999999999 999999999999999999999999977 8999999999999999876544332211 0
Q ss_pred ccceeccCCCc-----------ceeEEeccc-cCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHH
Q psy14338 219 GEVVAFKGWPK-----------LTWFVTEHL-AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRAL 286 (1761)
Q Consensus 219 ~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~ 286 (1761)
..++.++.... ......+.+ ..............++|+|+|+|||||||+||||++||+|++..+...
T Consensus 203 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~ 282 (696)
T PLN02387 203 KRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGV 282 (696)
T ss_pred eEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHH
Confidence 11222221100 000000000 000011111223468999999999999999999999999999888776
Q ss_pred HHHc-CCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCC-----HHHHHHHHHhcCceEEEecCHHHHH
Q psy14338 287 TQAC-HYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVN-----PASWMQMITKYRASVAVVKSRDLHW 360 (1761)
Q Consensus 287 ~~~~-~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~-----~~~l~~~i~~~~vt~~~~~p~~~~~ 360 (1761)
...+ +++++|+++.++|++|.+++.. .+..+..|+++.+..... ..+ +..+.+.++++++|++..+|. ++.
T Consensus 283 ~~~~~~~~~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~-l~~~~~~~~~~~~~~i~~~~pT~~~~vP~-~l~ 359 (696)
T PLN02387 283 MTVVPKLGKNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLT-LTDTSNKIKKGTKGDASALKPTLMTAVPA-ILD 359 (696)
T ss_pred HhhcCCCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhh-hcccccccccCchhhHHHhCCcEEEehhH-HHH
Confidence 6554 6889999999999999999875 666788888887754321 111 234567899999999999974 766
Q ss_pred HhhcCCCC------------------------CC-----------------------CCCCceeEEEecCCCccCCHHHH
Q psy14338 361 GLLATKDH------------------------KD-----------------------ISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 361 ~ll~~~~~------------------------~~-----------------------~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
.+...... .. ...++||.+++| |+|+++++.
T Consensus 360 ~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~G--Gapl~~~~~ 437 (696)
T PLN02387 360 RVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSG--GAPLSGDTQ 437 (696)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEc--CCCCCHHHH
Confidence 65432100 00 001589999999 999999998
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
+.+...+ |++ ++++||+||++..++..... ....+++|+|++++
T Consensus 438 ~~~~~~~---g~~---v~~~YG~TEt~~~~~~~~~~------------------------------~~~~gsvG~p~p~~ 481 (696)
T PLN02387 438 RFINICL---GAP---IGQGYGLTETCAGATFSEWD------------------------------DTSVGRVGPPLPCC 481 (696)
T ss_pred HHHHHHc---CCC---eeEeechhhcccceeecCcc------------------------------cCCCCccCCCCCce
Confidence 7776666 554 99999999998655433211 12356899999999
Q ss_pred EEEEEe-CCCCcccC--CCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEE
Q psy14338 474 IMTVVK-MDSPSYLC--KTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVF 550 (1761)
Q Consensus 474 ~~~I~d-~~~~~~~~--p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~ 550 (1761)
+++|+| +++.. .+ +++..|||+|+||+++.|||++|+.|+++|..++ ++.|||+|||+|++|+||+|+
T Consensus 482 evkivd~~~~~~-~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~--------~G~~W~~TGDig~~d~dG~l~ 552 (696)
T PLN02387 482 YVKLVSWEEGGY-LISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDE--------RGMRWFYTGDIGQFHPDGCLE 552 (696)
T ss_pred EEEEeeccccCc-ccCCCCCCCceEEeccCcccchhcCCHHHHhhhhcccc--------CCCceeecCceEEECCCCcEE
Confidence 999999 44432 12 3445799999999999999999999999995332 124699999999999999999
Q ss_pred EEeccCCeEEEC-CcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCC-------------C---
Q psy14338 551 VCGSRDGLMTVT-GRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC-------------S--- 613 (1761)
Q Consensus 551 ~~GR~d~qvki~-G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~-------------~--- 613 (1761)
|+||+||+||++ |++|+|.|||++|.+++.| .+++|++.+ ....++|++++..+. +
T Consensus 553 i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V-----~~~~V~g~~--~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~ 625 (696)
T PLN02387 553 IIDRKKDIVKLQHGEYVSLGKVEAALSVSPYV-----DNIMVHADP--FHSYCVALVVPSQQALEKWAKKAGIDYSNFAE 625 (696)
T ss_pred EEEcccceEECCCCeEEchHHHHHHHhcCCCe-----eEEEEEecC--CcceEEEEEEeCHHHHHHHHHHcCCCCCCHHH
Confidence 999999999985 9999999999999988877 788888853 356789999875420 0
Q ss_pred -------HHHHHHHHH-----HHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 614 -------EEESFQWMS-----RVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 614 -------~~~l~~~l~-----~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.+++.+.+. ..|+.|++|+.|.+..-.| .++.=-+|++.|+.|+.+.+.|.+
T Consensus 626 ~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~-t~~~g~lT~t~K~~R~~i~~~y~~ 689 (696)
T PLN02387 626 LCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPW-TPESGLVTAALKLKREQIRKKFKD 689 (696)
T ss_pred HhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCC-CCCCCcCChhhhhhhHHHHHHHHH
Confidence 112222222 2478889999873322111 123345899999999999998864
|
|
| >PRK13390 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-58 Score=593.64 Aligned_cols=481 Identities=16% Similarity=0.188 Sum_probs=379.6
Q ss_pred HHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHH
Q psy14338 89 RYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCI 168 (1761)
Q Consensus 89 ~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvl 168 (1761)
.+|+++|+++|+.+.+. + +++||+||.++++++|+.|. ++|+++||+|+++++|+ +++++++|||+
T Consensus 5 ~~a~~~p~~~a~~~~~~-~---~~lTy~el~~~~~~la~~L~--------~~gv~~gd~V~i~~~n~--~~~~~~~la~~ 70 (501)
T PRK13390 5 THAQIAPDRPAVIVAET-G---EQVSYRQLDDDSAALARVLY--------DAGLRTGDVVALLSDNS--PEALVVLWAAL 70 (501)
T ss_pred hhhhhCCCCcEEEecCC-C---eEeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence 46778999999987532 2 58999999999999999999 89999999999999999 99999999999
Q ss_pred HhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-c-ceeccCCCcceeEEeccccCCCCCCC
Q psy14338 169 FAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-E-VVAFKGWPKLTWFVTEHLAKTPKDWA 246 (1761)
Q Consensus 169 kaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1761)
++|++++|+++.++++ ++.+++++++++++++++............ . .+.+..... .....+...... .
T Consensus 71 ~~Ga~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~ 141 (501)
T PRK13390 71 RSGLYITAINHHLTAP-----EADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEID-GFGSFEAALAGA---G 141 (501)
T ss_pred HhCCEEeccccCCCHH-----HHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCccc-ccccHHHHhccc---C
Confidence 9999999999999976 899999999999999986543211111000 0 000000000 000000000000 0
Q ss_pred CCCCCCCCCcEEEEecCCCCCCceEEEE--chHHHHHHH----HHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhc
Q psy14338 247 PQPRLTDDTPAYIEYTTDRDGSVMGVTV--TRAAMLSHC----RALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLN 320 (1761)
Q Consensus 247 ~~~~~~~~~~a~ii~TSGSTG~PKgV~~--th~~l~~~~----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~ 320 (1761)
+ ......+.|+|+|||||||.||||++ +|+++.... ......+++..+++++..+|++|+.++.. .+..+..
T Consensus 142 ~-~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~ 219 (501)
T PRK13390 142 P-RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHAL 219 (501)
T ss_pred C-CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhc
Confidence 0 01122357999999999999999995 566655432 22244578899999999999999998864 5667788
Q ss_pred CcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeEEEecCCCccCCHHHHHHHHH
Q psy14338 321 GMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRLLLVGDGANPWSLSSCDQFLS 398 (1761)
Q Consensus 321 G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~ 398 (1761)
|+++++.+ .+++..+++.|+++++|++.++|+ ++..++.... ....+++++|.+++| |+++++++.+.|.+
T Consensus 220 g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~~~l~~v~~~--g~~~~~~~~~~~~~ 292 (501)
T PRK13390 220 GGTVVLAK----RFDAQATLGHVERYRITVTQMVPT-MFVRLLKLDADVRTRYDVSSLRAVIHA--AAPCPVDVKHAMID 292 (501)
T ss_pred CceEEEcC----CcCHHHHHHHHHHcCCeEEEecHH-HHHHHHhccchhcccCChhhhheEEEc--CCCCCHHHHHHHHH
Confidence 99999887 678999999999999999999964 7766665322 123457899999999 99999999999988
Q ss_pred HhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEE
Q psy14338 399 VFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478 (1761)
Q Consensus 399 ~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~ 478 (1761)
.+ |.+ +++.||+||++.++...... ......++|+|+++ .++|+
T Consensus 293 ~~---~~~---~~~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~~G~~~~g-~~~i~ 336 (501)
T PRK13390 293 WL---GPI---VYEYYSSTEAHGMTFIDSPD-----------------------------WLAHPGSVGRSVLG-DLHIC 336 (501)
T ss_pred hc---CCc---eeeeecccccCceEEecchh-----------------------------hccCCCCcCCcccc-eEEEE
Confidence 77 443 99999999998655432210 01234689999999 69999
Q ss_pred eCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCe
Q psy14338 479 KMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGL 558 (1761)
Q Consensus 479 d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~q 558 (1761)
|++++ ++|.|++|||+|+|++++.||+|+|+.|+++|.+. .++||+|||+|++++||+++|.||.|++
T Consensus 337 d~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~----------~~~w~~tGDl~~~~~dg~l~~~gR~~~~ 404 (501)
T PRK13390 337 DDDGN--ELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPA----------HPFWTTVGDLGSVDEDGYLYLADRKSFM 404 (501)
T ss_pred CCCCC--CCCCCCceEEEEecCCccccccCChhhhHHhhccC----------CCceEEcCceEEECCCCeEEEeeccccc
Confidence 99886 58999999999999999999999999999988521 2689999999999999999999999999
Q ss_pred EEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCC--C---HHHHHHHHHHHHHHhhhcc
Q psy14338 559 MTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDC--S---EEESFQWMSRVLQAVDSIH 632 (1761)
Q Consensus 559 vki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~--~---~~~l~~~l~~~Lp~y~~P~ 632 (1761)
||++|+||+|.|||++|.+++.| .+++|+++++. .++.++++++...+. + .++++++++++||.||+|.
T Consensus 405 i~~~G~~v~p~eIE~~l~~~~~v-----~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~ 479 (501)
T PRK13390 405 IISGGVNIYPQETENALTMHPAV-----HDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPR 479 (501)
T ss_pred eeECCeeeCHHHHHHHHHhCCCe-----eEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCc
Confidence 99999999999999999988877 79999999854 578888888876542 1 4588999999999999999
Q ss_pred eeeeeEEEEeCCCCccCCCCCcccHHHHH
Q psy14338 633 QVGLYCLALVPPNYLPKTPLGGIHLSECK 661 (1761)
Q Consensus 633 ~i~~~~v~~v~~~~lP~t~~GKidR~~L~ 661 (1761)
.+ +.+++||+|++||++|++|+
T Consensus 480 ~~-------~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 480 SV-------EFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred EE-------EEeccCCCCCccceehhhcC
Confidence 86 55699999999999999874
|
|
| >PRK06178 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-57 Score=598.53 Aligned_cols=504 Identities=18% Similarity=0.228 Sum_probs=402.9
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|+++++.+|+++|+.+.+ +.+||+||+++++++|..|. +.|+++|++|+++++|+ .++
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~~~------~~~Ty~~l~~~~~~la~~L~--------~~g~~~g~~V~i~~~n~--~~~ 96 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIFYG------HVITYAELDELSDRFAALLR--------QRGVGAGDRVAVFLPNC--PQF 96 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEECC------ceeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--cHH
Confidence 579999999999999999998765 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----cceecc--CC-Cc---c
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----EVVAFK--GW-PK---L 230 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~--~~-~~---~ 230 (1761)
++++|||+++|++++|++|.++.. ++.+++++++++++++++...+.+...... .++... +. +. .
T Consensus 97 ~~~~lA~~~~G~~~v~l~p~~~~~-----~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 171 (567)
T PRK06178 97 HIVFFGILKLGAVHVPVSPLFREH-----ELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTL 171 (567)
T ss_pred HHHHHHHHHhCeEEeecCCCCCHH-----HHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccc
Confidence 999999999999999999999876 899999999999999988755433221100 000000 00 00 0
Q ss_pred ee---E---------EeccccC--CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH-HcCCCCC
Q psy14338 231 TW---F---------VTEHLAK--TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ-ACHYTEG 295 (1761)
Q Consensus 231 ~~---~---------~~~~~~~--~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~ 295 (1761)
.. . ..+.... ............++++|+|+|||||||.||||+++|+++...+..... ...+.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~ 251 (567)
T PRK06178 172 PLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGED 251 (567)
T ss_pred ccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCC
Confidence 00 0 0000000 000111123356799999999999999999999999999876654433 3667889
Q ss_pred CeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCc
Q psy14338 296 ENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSS 375 (1761)
Q Consensus 296 d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~ 375 (1761)
|+++.++|++|.+|+...++.+|++|+++++.+ .+++..+++.++++++|++..+|+ ++..++........++++
T Consensus 252 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~----~~~~~~~~~~i~~~~~t~~~~~~~-~~~~l~~~~~~~~~~l~~ 326 (567)
T PRK06178 252 SVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA----RWDAVAFMAAVERYRVTRTVMLVD-NAVELMDHPRFAEYDLSS 326 (567)
T ss_pred cEEEEecchHHHHHHHHHHHHHHHcCceEEEeC----CCCHHHHHHHHHHhCCeEEeccHH-HHHHHHhCCCCCCCCcch
Confidence 999999999999998656899999999999998 679999999999999999999865 666666654444556788
Q ss_pred eeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCC
Q psy14338 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQE 455 (1761)
Q Consensus 376 Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 455 (1761)
+|.+..++.++++++++.+.|.+.++ .. .+.+.||+||++..+....... ..
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~g---~~--~~~~~YG~tE~~~~~~~~~~~~-----------------------~~ 378 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALTG---SV--LAEAAWGMTETHTCDTFTAGFQ-----------------------DD 378 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHhC---Cc--ccccccccccccccceeccccc-----------------------cC
Confidence 99887765579999999999999873 32 2446899999875443221100 00
Q ss_pred CccCcccccccCCCCCCcEEEEEeCC-CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCce
Q psy14338 456 NSLTSLTLQDCGQVMPGCIMTVVKMD-SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTY 534 (1761)
Q Consensus 456 ~~~~~~~~~~iG~p~~~~~~~I~d~~-~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~ 534 (1761)
.......++++|+|++|++++|+|++ +. ++|.|++|||+|+|++++.||+|+++.|++.|. +||
T Consensus 379 ~~~~~~~~~~vG~p~~g~~v~v~d~~~~~--~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~-------------dg~ 443 (567)
T PRK06178 379 DFDLLSQPVFVGLPVPGTEFKICDFETGE--LLPLGAEGEIVVRTPSLLKGYWNKPEATAEALR-------------DGW 443 (567)
T ss_pred ccccccCCcccccccCCcEEEEEcCCCCC--cCCCCCceEEEEECCcccccccCChhhhhhccc-------------CCc
Confidence 00001235689999999999999954 54 699999999999999999999999999998884 679
Q ss_pred EeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--
Q psy14338 535 TRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD-- 611 (1761)
Q Consensus 535 yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~-- 611 (1761)
|+|||+|++++||+++|+||+||+||++|++|+|.|||+.+.+++.+ .+++|++.++. .++.+++++++.++
T Consensus 444 ~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 518 (567)
T PRK06178 444 LHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAV-----LGSAVVGRPDPDKGQVPVAFVQLKPGAD 518 (567)
T ss_pred eeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCe-----eEEEEEcCcCcccCcceEEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999988887 79999988743 56788999987654
Q ss_pred CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 612 CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 612 ~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.+.++++++++++|+.|++|. + ..++++|+|++||++|++|++.+++
T Consensus 519 ~~~~~l~~~~~~~l~~~~~p~-i-------~~v~~iP~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 519 LTAAALQAWCRENMAVYKVPE-I-------RIVDALPMTATGKVRKQDLQALAEE 565 (567)
T ss_pred CCHHHHHHHHHhcCcccCCce-E-------EEeccCCCCCccceeHHHHHHHHHh
Confidence 578899999999999999996 5 2359999999999999999998754
|
|
| >PRK06839 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-57 Score=587.42 Aligned_cols=473 Identities=16% Similarity=0.205 Sum_probs=392.1
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
+.+||++|++ ++++.+||+||.++++++|+.|++..|+++|++|+++++|++++++++|||+++|++++|++|.+
T Consensus 13 ~~~p~~~a~~-----~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~ 87 (496)
T PRK06839 13 YLHPDRIAII-----TEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVPLNIRL 87 (496)
T ss_pred HHCCCCeEEE-----ECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecCccc
Confidence 4779999999 67899999999999999999998633999999999999999999999999999999999999877
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----cccccccCCccccCCCCccchhhhccCCCCCCCEEEE
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----NVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYL 1334 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 1334 (1761)
+.+ ++..++++++++++++++.....+...... ..+...++....... ........++++++|
T Consensus 88 ~~~------~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i 154 (496)
T PRK06839 88 TEN------ELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSLKEIEDRK-------IDNFVEKNESASFII 154 (496)
T ss_pred CHH------HHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecchHhhhccC-------CCCCCCCCCCCcEEE
Confidence 766 999999999999999998776554433211 111111111111100 011223466899999
Q ss_pred EeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHH
Q psy14338 1335 DFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALW 1414 (1761)
Q Consensus 1335 i~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l 1414 (1761)
+|||||||.||||+++|+++..........+++.++|+++..+|++|..++...++.++..|+++++.+. +++..+
T Consensus 155 ~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~ 230 (496)
T PRK06839 155 CYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRK----FEPTKA 230 (496)
T ss_pred EeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccC----CCHHHH
Confidence 9999999999999999999988777777788899999999999999888876667889999999988763 799999
Q ss_pred HHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccc
Q psy14338 1415 LSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSF 1494 (1761)
Q Consensus 1415 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~y 1494 (1761)
++.++++++|++.++|++++.+++.. .....+++++|.+++||+++++ .+.+++.+. | ..+.+.|
T Consensus 231 ~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~lr~~~~gG~~~~~-~~~~~~~~~----g---~~~~~~Y 295 (496)
T PRK06839 231 LSMIEKHKVTVVMGVPTIHQALINCS-------KFETTNLQSVRWFYNGGAPCPE-ELMREFIDR----G---FLFGQGF 295 (496)
T ss_pred HHHHHhhCCeEEEehHHHHHHHHhCc-------ccccCCCcccceEEECCCCCCH-HHHHHHHHh----C---CeeEeec
Confidence 99999999999999999999997632 2234568899999999999998 777776653 3 5789999
Q ss_pred cccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEc
Q psy14338 1495 GCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQ 1574 (1761)
Q Consensus 1495 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~ 1574 (1761)
|+||++..+...... ....+..++|+|+++++++|+|++ ++.+|.|+.|||+|+
T Consensus 296 G~tE~~~~~~~~~~~-------------------------~~~~~~~~~G~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~ 349 (496)
T PRK06839 296 GMTETSPTVFMLSEE-------------------------DARRKVGSIGKPVLFCDYELIDEN-KNKVEVGEVGELLIR 349 (496)
T ss_pred cCCCCCcceEecccc-------------------------cccccCCCCcccCCCceEEEECCC-cCCCCCCCceEEEEE
Confidence 999976533211100 000123459999999999999976 677999999999999
Q ss_pred CCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEe
Q psy14338 1575 SPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIML 1654 (1761)
Q Consensus 1575 g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki 1654 (1761)
|+.++.||++ +|+.++..| .+|||+|||+|++ ++| |+ ++|+||.||+||+
T Consensus 350 ~~~~~~gy~~---~~~~~~~~~---------~~g~~~TGDl~~~------~~~--------g~----~~~~GR~~d~i~~ 399 (496)
T PRK06839 350 GPNVMKEYWN---RPDATEETI---------QDGWLCTGDLARV------DED--------GF----VYIVGRKKEMIIS 399 (496)
T ss_pred CCCcchhhcC---ChHHHHHHH---------cCCCeeecceEEE------cCC--------Cc----EEEeccccceEEE
Confidence 9999999999 999999887 4689999999999 999 99 9999999999999
Q ss_pred CCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCC
Q psy14338 1655 RGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPG 1728 (1761)
Q Consensus 1655 ~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~ 1728 (1761)
+|.+|+|.|||+ ++..+|+|.+|+|++. ++.++++|+.. +...+.+++++++++. |+ .|++|..|++++
T Consensus 400 ~G~~v~p~~iE~-~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-~~~~P~~~~~v~-- 474 (496)
T PRK06839 400 GGENIYPLEVEQ-VINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRLF-LA-KYKIPKEIVFLK-- 474 (496)
T ss_pred CCEEECHHHHHH-HHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHhh-Cc-CCCCCcEEEEec--
Confidence 999999999999 8999999999999974 44678888764 3345667899999987 88 899999999999
Q ss_pred CccCCCchhhhHHHHHHHHHc
Q psy14338 1729 VVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1729 ~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
++|+|++||++|++|+++..+
T Consensus 475 ~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 475 ELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred cCCCCccccccHHHHHHHhhc
Confidence 999999999999999987643
|
|
| >PRK08751 putative long-chain fatty acyl CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-58 Score=598.89 Aligned_cols=496 Identities=20% Similarity=0.263 Sum_probs=399.4
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|.+.++++|+++|+++.+ +.+||+||.++++++|+.|.. +.|+++|++|+++++|+ .++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~-------~~g~~~g~~V~i~~~~~--~~~ 89 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSFG------KTITYREADQLVEQFAAYLLG-------ELQLKKGDRVALMMPNC--LQY 89 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEECC------ceeeHHHHHHHHHHHHHHHHH-------HhCCCCCCEEEEECCCC--HHH
Confidence 578999999999999999998754 689999999999999999962 46899999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----ccceecc--C---CCcce
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----GEVVAFK--G---WPKLT 231 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~~--~---~~~~~ 231 (1761)
++++|||+++|++++|++|.++.+ ++.+++++++++++++++.....+..... ..++... . .+...
T Consensus 90 ~~~~lA~~~~G~~~v~l~p~~~~~-----~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (560)
T PRK08751 90 PIATFGVLRAGLTVVNVNPLYTPR-----ELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAA 164 (560)
T ss_pred HHHHHHHHHhCeEEeccCccCCHH-----HHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccch
Confidence 999999999999999999999976 89999999999999998765332211100 0010000 0 00000
Q ss_pred ---e-----------------E-EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc
Q psy14338 232 ---W-----------------F-VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC 290 (1761)
Q Consensus 232 ---~-----------------~-~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 290 (1761)
. . ..+..........+.....++++++++|||||||+||||+++|+++...+.+....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~ 244 (560)
T PRK08751 165 LVNFVVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWL 244 (560)
T ss_pred hhhhhhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhh
Confidence 0 0 000000000001112335678999999999999999999999999988887766655
Q ss_pred C----CCCC-CeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC
Q psy14338 291 H----YTEG-ENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365 (1761)
Q Consensus 291 ~----~~~~-d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~ 365 (1761)
+ +.++ ++++.++|++|.+++....+.++..|+++++... .+++..+++.++++++|++..+| .++..++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p-~~~~~l~~~ 320 (560)
T PRK08751 245 AGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISN---PRDMPGFVKELKKTRFTAFTGVN-TLFNGLLNT 320 (560)
T ss_pred ccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecC---cCCHHHHHHHHHhcceeEecChH-HHHHHHHcC
Confidence 4 3344 5677889999998876556778889999888764 56899999999999999999986 477777776
Q ss_pred CCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCc
Q psy14338 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGL 445 (1761)
Q Consensus 366 ~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~ 445 (1761)
......++++||.+++| |+++++.+.++|.+.+ |.+ +++.||+||++.+++..+..
T Consensus 321 ~~~~~~~l~~lr~v~~g--G~~~~~~~~~~~~~~~---~~~---~~~~YG~tE~~~~~~~~~~~---------------- 376 (560)
T PRK08751 321 PGFDQIDFSSLKMTLGG--GMAVQRSVAERWKQVT---GLT---LVEAYGLTETSPAACINPLT---------------- 376 (560)
T ss_pred cCcCCcchhhheeeeeC--CCCCCHHHHHHHHHHh---CCe---EEEeeccccCCCceeccccc----------------
Confidence 55555678899999999 9999999999999877 443 99999999998655433211
Q ss_pred ccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccC
Q psy14338 446 SYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLAD 525 (1761)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~ 525 (1761)
......++|+|+++++++|+|++++ ++|.|+.|||+|+|+++++||+++|+.|++.|.
T Consensus 377 -------------~~~~~~~vG~~~~~~~v~i~d~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~------- 434 (560)
T PRK08751 377 -------------LKEYNGSIGLPIPSTDACIKDDAGT--VLAIGEIGELCIKGPQVMKGYWKRPEETAKVMD------- 434 (560)
T ss_pred -------------ccccCCCcCccCCCceEEEECCCCC--CCCCCCceEEEEecCccchhhcCChhhhhhccc-------
Confidence 0112457999999999999999886 589999999999999999999999999998883
Q ss_pred CCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEE
Q psy14338 526 GTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICV 604 (1761)
Q Consensus 526 g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a 604 (1761)
+++||+|||+|++++||.++++||.||+||++|++|+|.|||+.|..++.+ .+++|+++++. .++.+++
T Consensus 435 -----~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v-----~~~~v~~~~~~~~ge~~~~ 504 (560)
T PRK08751 435 -----ADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGV-----LEVAAVGVPDEKSGEIVKV 504 (560)
T ss_pred -----cCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCe-----eeeEEEecCCCCCCceEEE
Confidence 368999999999999999999999999999999999999999999998887 79999998853 5667777
Q ss_pred EEEeCC-CCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHH
Q psy14338 605 IAEQRP-DCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR 663 (1761)
Q Consensus 605 ~v~~~~-~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~ 663 (1761)
+++... ..+.++++++++++|+.|++|..+ +.+++||+|++||++|++|++.
T Consensus 505 ~v~~~~~~~~~~~l~~~~~~~l~~~~~P~~v-------~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 505 VIVKKDPALTAEDVKAHARANLTGYKQPRII-------EFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred EEEcCCCCCCHHHHHHHHHHhhhhccCCeEE-------EEhhhCCCCccccccHHHHHHh
Confidence 776543 357789999999999999999986 5569999999999999999875
|
|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-58 Score=615.21 Aligned_cols=492 Identities=13% Similarity=0.136 Sum_probs=381.7
Q ss_pred cccccccccccCCCCcCCCCC-CCceEEccCCC-CceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPV-PPGVSSVDTRS-AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICA 1240 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~-~~Av~~~d~~~-~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva 1240 (1761)
.++++.|.+.+. ++|+ ++|+. + +.+.+||+||.++++++|++|.+. +++||+|+|+++|+++++++
T Consensus 204 ~t~~~~l~~~~~-----~~p~~~~a~~-----~~~~~~~Ty~el~~~~~~lA~~L~~~--~~~gd~Val~~~n~~e~~~~ 271 (718)
T PRK08043 204 ETLYEALLSAQY-----RYGAGKPCIE-----DVNFTPDSYRKLLKKTLFVGRILEKY--SVEGERIGLMLPNATISAAV 271 (718)
T ss_pred CCHHHHHHHHHH-----HhCCCCcceE-----cCCCCcccHHHHHHHHHHHHHHHHHh--cCCCceEEEEcCCcHHHHHH
Confidence 456666766554 7798 67876 3 347899999999999999999886 49999999999999999999
Q ss_pred HHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhh--hcc----ccccccccCCccccCCCC
Q psy14338 1241 FYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKS--KEA----SNVVDIKSWPTILDTDDM 1314 (1761)
Q Consensus 1241 ~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~ 1314 (1761)
+|||+++|++++|+++.++.+ ++++++++++++++|++.+..+.... ... ...+..............
T Consensus 272 ~lA~~~~G~v~vpl~~~~~~~------~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 345 (718)
T PRK08043 272 IFGASLRRRIPAMMNYTAGVK------GLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADK 345 (718)
T ss_pred HHHHHHcCCcccccccCcCHH------HHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHH
Confidence 999999999999999877777 99999999999999998776442110 000 000000000000000000
Q ss_pred ----ccc-hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHH
Q psy14338 1315 ----PKK-KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWV 1389 (1761)
Q Consensus 1315 ----~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 1389 (1761)
... ..........+++++||+|||||||.||||+++|+++.+.+.+....++++++|+++..+|++|.+++...+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~ 425 (718)
T PRK08043 346 LWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGL 425 (718)
T ss_pred HHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHH
Confidence 000 000011234678999999999999999999999999999998888888999999999999999999887778
Q ss_pred HHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCCh
Q psy14338 1390 LSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPR 1469 (1761)
Q Consensus 1390 ~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~ 1469 (1761)
+.+|..|+++++.+. .+++..+++.++++++|+++.+|+++..+.+. ....++++||.+++||+++++
T Consensus 426 ~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---------~~~~~~~~lr~i~~gg~~l~~ 493 (718)
T PRK08043 426 FTPLLTGAEVFLYPS---PLHYRIVPELVYDRNCTVLFGTSTFLGNYARF---------ANPYDFARLRYVVAGAEKLQE 493 (718)
T ss_pred HHHHHcCCEEEEeCC---cccHHHHHHHHHhcCCeEEEchHHHHHHhhhh---------cCcccccceEEEEEeCccCCH
Confidence 999999999998874 25678889999999999999999999877542 134567899999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCC
Q psy14338 1470 IHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPG 1549 (1761)
Q Consensus 1470 ~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~ 1549 (1761)
++.++|.+.++ ..+++.||+||++.++..... ...+.+++|+|++|
T Consensus 494 -~~~~~~~~~~g------~~l~~~YG~TE~~~~~~~~~~---------------------------~~~~~~svG~p~pg 539 (718)
T PRK08043 494 -STKQLWQDKFG------LRILEGYGVTECAPVVSINVP---------------------------MAAKPGTVGRILPG 539 (718)
T ss_pred -HHHHHHHHHcC------CCeecccCcccccceEEecCC---------------------------cccCCCCCCCcCCC
Confidence 78788877663 479999999998655432110 00113469999999
Q ss_pred cEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCC--hhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCC
Q psy14338 1550 VKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGD--ESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVA 1627 (1761)
Q Consensus 1550 ~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~--p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d 1627 (1761)
++++|+|++ + .|+.|||+|+|++++.|||+ + |+.+...+.... .+...+|||+|||+|++ |+|
T Consensus 540 ~~~~i~d~~-~----~~~~Gel~v~g~~v~~GY~~---~e~~~~~~~~~~~~~-~~~~~~gw~~TGDlg~~------d~d 604 (718)
T PRK08043 540 MDARLLSVP-G----IEQGGRLQLKGPNIMNGYLR---VEKPGVLEVPTAENA-RGEMERGWYDTGDIVRF------DEQ 604 (718)
T ss_pred CeeEEecCC-C----CCCceEEEEecCCccccccC---CCCcccccccccccc-cccccCCeEecCCEEEE------cCC
Confidence 999999865 3 25679999999999999997 4 332211110000 00024689999999999 999
Q ss_pred CCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhh
Q psy14338 1628 GAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALD 1702 (1761)
Q Consensus 1628 ~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~ 1702 (1761)
|+ ++|+||+||+||++|+||+|.|||+ ++.+|+.+.+++|++. ++.+++++. +...+.++
T Consensus 605 --------G~----l~i~GR~~d~I~~~G~~V~p~eIE~-~l~~~~~~~~~avv~~~~~~~ge~~v~~~~--~~~~~~~~ 669 (718)
T PRK08043 605 --------GF----VQIQGRAKRFAKIAGEMVSLEMVEQ-LALGVSPDKQHATAIKSDASKGEALVLFTT--DSELTREK 669 (718)
T ss_pred --------Cc----EEEEecCCCeeEeCcEEcCHHHHHH-HHHhCCccceEEEEEccCCCCCceEEEEEc--CcccCHHH
Confidence 99 9999999999999999999999999 8889988888888763 446666664 34456778
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
++++++++.|+ .||+|..|++++ +||+|++||+||++|++++.+.+
T Consensus 670 l~~~~~~~~l~-~~~vP~~i~~v~--~lP~t~~GKi~r~~L~~~~~~~~ 715 (718)
T PRK08043 670 LQQYAREHGVP-ELAVPRDIRYLK--QLPLLGSGKPDFVTLKSMVDEPE 715 (718)
T ss_pred HHHHHHhcCCC-cccCCceEEEec--ccCcCCCCCcCHHHHHHHHhccc
Confidence 99999886587 999999999999 99999999999999999886543
|
|
| >TIGR03205 pimA dicarboxylate--CoA ligase PimA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-57 Score=594.42 Aligned_cols=492 Identities=20% Similarity=0.233 Sum_probs=392.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.++|+++++++|+++|+.+.+ +.+||.||+++++++|++|. +.|+++|++|+++++|+ .+
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~~~------~~~ty~el~~~~~~~a~~L~--------~~gi~~g~~V~i~~~~~--~~ 83 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEFRD------RPITYTELEAMAETAAAALL--------RAGYGKDASVALYLGNT--PD 83 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEECC------cEeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--hH
Confidence 4589999999999999999998755 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccc--ccCcc----cccccceeccCC--Ccc-
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACL--KGLPK----TAAGEVVAFKGW--PKL- 230 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~--~~~~~----~~~~~~~~~~~~--~~~- 230 (1761)
+++++|||+++|+++||++|.++.+ ++.+++++++++++++++... ..... .....++..... ...
T Consensus 84 ~~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (541)
T TIGR03205 84 HPINFFGALKAGARVVHLSPLDGER-----ALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVG 158 (541)
T ss_pred HHHHHHHHHhcCeEEEecCCCCCHH-----HHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEeccccccccc
Confidence 9999999999999999999999866 899999999999999975311 00000 000011110000 000
Q ss_pred ----------eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH-----HcCCCCC
Q psy14338 231 ----------TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ-----ACHYTEG 295 (1761)
Q Consensus 231 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~-----~~~~~~~ 295 (1761)
.....+................++++++++|||||||+||||+++|+++.+....... .......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 238 (541)
T TIGR03205 159 TPQAPIPADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDV 238 (541)
T ss_pred ccccccCCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCC
Confidence 0000000000000011122356789999999999999999999999998765543211 1122345
Q ss_pred CeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCc
Q psy14338 296 ENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSS 375 (1761)
Q Consensus 296 d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~ 375 (1761)
++++..+|++|..++...++.++..|+++++.+ .+++..+++.|+++++|++..+|+ ++..++........++++
T Consensus 239 ~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~ 313 (541)
T TIGR03205 239 ERVICVLPLFHIYALTVILLRSLRRGDLISLHQ----RFDVAAVFRDIEEKRATVFPGVPT-MWIALANDPSLEKRDLSS 313 (541)
T ss_pred ceEEEeccHHHHHHHHHHHHHHHhcCCEEEecC----CCCHHHHHHHHHHcCCeEeechHH-HHHHHHhCccccccCccc
Confidence 789999999999888766888999999998876 679999999999999999999974 777776654444556789
Q ss_pred eeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCC
Q psy14338 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQE 455 (1761)
Q Consensus 376 Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 455 (1761)
+|.+++| |+++++++.+.|.+.+ |.+ +++.||+||++.+++.....
T Consensus 314 l~~i~~g--g~~~~~~~~~~~~~~~---~~~---~~~~YG~TE~~~~~~~~~~~-------------------------- 359 (541)
T TIGR03205 314 LATIGSG--GAPLPVEVANFFERKT---GLK---LKSGWGMTETCSPGTGHPPE-------------------------- 359 (541)
T ss_pred cceEEEc--cccCCHHHHHHHHHHh---CCC---eecccccccCCcccccCCCC--------------------------
Confidence 9999999 9999999998888877 443 99999999998655432210
Q ss_pred CccCcccccccCCCCCCcEEEEEe--CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCc
Q psy14338 456 NSLTSLTLQDCGQVMPGCIMTVVK--MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDT 533 (1761)
Q Consensus 456 ~~~~~~~~~~iG~p~~~~~~~I~d--~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~ 533 (1761)
......++|+|++++.++|++ ++++ ++|.|+.|||+|+|++++.||+|+|+.|++.|. ++
T Consensus 360 ---~~~~~~~~G~~~~~~~~~v~~~d~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------~~ 421 (541)
T TIGR03205 360 ---GPDKPGSIGLMLPGIELDVVSLDDPTK--VLPPGEVGELRIRGPNVTRGYWNRPEESAEAFV-------------GD 421 (541)
T ss_pred ---CCCCCCCcceeccCceeEEEecCCCCc--cCCCCCeeEEEEecCCccccccCChhhhHhhhc-------------cC
Confidence 011246899999999998865 4444 689999999999999999999999999999985 67
Q ss_pred eEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC-
Q psy14338 534 YTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD- 611 (1761)
Q Consensus 534 ~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~- 611 (1761)
||+|||++++++||+++|+||.||+||++|+||+|.|||+.+.+++.+ .+++|+++++. .++.++++++...+
T Consensus 422 ~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~ 496 (541)
T TIGR03205 422 RFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGV-----QEVIVIGIPDQYRGEAAKAFVKLRPGA 496 (541)
T ss_pred CcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCe-----eeEEEEecCCcccCceEEEEEEECCCC
Confidence 999999999999999999999999999999999999999999998887 79999998854 56788999887654
Q ss_pred --CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHH
Q psy14338 612 --CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECK 661 (1761)
Q Consensus 612 --~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~ 661 (1761)
.+.++++++++++|+.|++|..+ +.+++||+|++||++|++|+
T Consensus 497 ~~~~~~~l~~~~~~~l~~~~~P~~i-------~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 497 KPFSLDELRAFLAGKLGKHELPVAV-------EFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred CcCCHHHHHHHHHhhcccccCCcEE-------EEeccCCCCcccceeHhhcC
Confidence 46789999999999999999986 44599999999999999874
|
PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids. |
| >PRK07059 Long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-57 Score=596.35 Aligned_cols=496 Identities=19% Similarity=0.240 Sum_probs=399.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|.++++++|+++|+.+.+ +.+||+||.++++++|+.|. +.|+++|++|+++++|+ ++
T Consensus 22 ~~~i~~~l~~~a~~~p~~~a~~~~~------~~lTy~~l~~~~~~~a~~L~--------~~gi~~gd~V~i~~~n~--~~ 85 (557)
T PRK07059 22 YPSLADLLEESFRQYADRPAFICMG------KAITYGELDELSRALAAWLQ--------SRGLAKGARVAIMMPNV--LQ 85 (557)
T ss_pred CCCHHHHHHHHHHHcCCCceEEEcC------ceeeHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCC--HH
Confidence 4689999999999999999999865 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc----cccceecc--CCCc----
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA----AGEVVAFK--GWPK---- 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~----~~~~~~~~--~~~~---- 229 (1761)
+++++|||+++|++++|++|.++.+ ++.+++++++++++|+++.....+.... ...+.... ....
T Consensus 86 ~~~~~la~~~~G~~~v~v~~~~~~~-----~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (557)
T PRK07059 86 YPVAIAAVLRAGYVVVNVNPLYTPR-----ELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGH 160 (557)
T ss_pred HHHHHHHHHhcCeEEeccCcccCHH-----HHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccc
Confidence 9999999999999999999999876 8999999999999999876543221110 00000000 0000
Q ss_pred ------------------ceeEE-eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc
Q psy14338 230 ------------------LTWFV-TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC 290 (1761)
Q Consensus 230 ------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 290 (1761)
..... .+................++++|+|+|||||||.||||+++|++++..+......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~ 240 (557)
T PRK07059 161 IVNFVVRRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWL 240 (557)
T ss_pred ccccccccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhh
Confidence 00000 00000000011112345689999999999999999999999999987654433222
Q ss_pred ----CCC---CCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhh
Q psy14338 291 ----HYT---EGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLL 363 (1761)
Q Consensus 291 ----~~~---~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll 363 (1761)
... ....++..+|++|.+++....+.++..|++.++.+. ..++..+++.++++++|++..+| +++..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~vt~~~~~p-~~~~~l~ 316 (557)
T PRK07059 241 QPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPN---PRDIPGFIKELKKYQVHIFPAVN-TLYNALL 316 (557)
T ss_pred cccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecC---CcCHHHHHHHHHHhCCeeeecCH-HHHHHHH
Confidence 111 235678889999988865457888999999888774 45899999999999999999986 4777777
Q ss_pred cCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCcccccc
Q psy14338 364 ATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMS 443 (1761)
Q Consensus 364 ~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~ 443 (1761)
........+++++|.++.| |+++++.+.++|.+.+ |.+ ++|.||+||++.+++.....
T Consensus 317 ~~~~~~~~~~~~l~~~~~g--g~~~~~~~~~~~~~~~---~~~---~~~~YG~tE~~~~~~~~~~~-------------- 374 (557)
T PRK07059 317 NNPDFDKLDFSKLIVANGG--GMAVQRPVAERWLEMT---GCP---ITEGYGLSETSPVATCNPVD-------------- 374 (557)
T ss_pred cCcCcCcCCchhheEEEec--cccCCHHHHHHHHHHh---CCC---eeeccccccccchhhcCCCC--------------
Confidence 7655555677899999988 9999999999999887 443 99999999998765533211
Q ss_pred CcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccc
Q psy14338 444 GLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLL 523 (1761)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~ 523 (1761)
......++|+|++|++++|+|++++ ++|.|+.|||+|+|+.++.||+++++.|++.|.
T Consensus 375 ---------------~~~~~~~vG~p~~g~~v~i~d~~~~--~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~----- 432 (557)
T PRK07059 375 ---------------ATEFSGTIGLPLPSTEVSIRDDDGN--DLPLGEPGEICIRGPQVMAGYWNRPDETAKVMT----- 432 (557)
T ss_pred ---------------CCCcCCcccCccCCcEEEEECCCCC--CCCCCCceEEEEeCCccchhhhcCHHHHhhhcc-----
Confidence 0122468999999999999999886 599999999999999999999999999998874
Q ss_pred cCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceE
Q psy14338 524 ADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERI 602 (1761)
Q Consensus 524 ~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l 602 (1761)
.++||+|||+|++++||.++++||+||+||++|++|+|.|||+++.+++.| .+++|++.++ ..++.+
T Consensus 433 -------~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V-----~~~~v~~~~~~~~ge~~ 500 (557)
T PRK07059 433 -------ADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASHPGV-----LEVAAVGVPDEHSGEAV 500 (557)
T ss_pred -------cCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhCCce-----eEEEEEecccCCCCeeE
Confidence 378999999999999999999999999999999999999999999998888 6899998875 457788
Q ss_pred EEEEEeCCC-CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHH
Q psy14338 603 CVIAEQRPD-CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRR 663 (1761)
Q Consensus 603 ~a~v~~~~~-~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~ 663 (1761)
+++++.... .+.+++++++++.|+.|++|..+ ..++++|+|++||++|+.|+++
T Consensus 501 ~~~v~~~~~~~~~~~l~~~~~~~l~~~~~P~~i-------~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 501 KLFVVKKDPALTEEDVKAFCKERLTNYKRPKFV-------EFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHhcccccCCcEE-------EEeccCCCCcccceeHHHHHhh
Confidence 888886553 67789999999999999999987 4469999999999999999864
|
|
| >PRK05857 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-57 Score=593.48 Aligned_cols=493 Identities=16% Similarity=0.184 Sum_probs=374.5
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.+..++. ++|+++|+...+ +++.+||+||+++++++|+.|.+. |+++|++|+++++|++++++++||
T Consensus 15 ~~~~~l~~~a~-----~~p~~~a~~~~~---~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~e~~~~~lA 85 (540)
T PRK05857 15 TVLDRVFEQAR-----QQPEAIALRRCD---GTSALRYRELVAEVGGLAADLRAQ-SVSRGSRVLVISDNGPETYLSVLA 85 (540)
T ss_pred chHHHHHHHHh-----hCCCcEEEeecC---CCceeeHHHHHHHHHHHHHHHHHh-CcCCCCEEEEEcCCCHHHHHHHHH
Confidence 45555665554 779999998433 346799999999999999999998 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc----ccccccccCCc-cccCCCCccch
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA----SNVVDIKSWPT-ILDTDDMPKKK 1318 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~ 1318 (1761)
|+++|++++||||.+|.+ ++.++++.++++++|+++........+.. ...+....... ........ ..
T Consensus 86 ~~~~G~v~v~l~~~~~~~------~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 158 (540)
T PRK05857 86 CAKLGAIAVMADGNLPIA------AIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLD-AA 158 (540)
T ss_pred HHHcCeEEEecCccCCHH------HHHHHHHhcCCceEEEeccchhccccccccccccceeEeeccccccccccccc-cc
Confidence 999999999999988887 99999999999999998764321111110 00000000000 00000000 00
Q ss_pred hhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHH----HcCcCCCCeEEEEeCCccChhHHHHHHHHhh
Q psy14338 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----ACELYPSRHIALCLDPYCGLGFALWVLSSVY 1394 (1761)
Q Consensus 1319 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~ 1394 (1761)
.........+++++|++|||||||.||||+++|+++.+++..... .++...+++.+..+|++|..++ +..+.+++
T Consensus 159 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l-~~~~~~l~ 237 (540)
T PRK05857 159 SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGL-WWILTCLM 237 (540)
T ss_pred ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchH-HHHHHHhh
Confidence 011123346789999999999999999999999999876554322 2355567788888999988887 46788999
Q ss_pred cCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHH
Q psy14338 1395 SGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTS 1474 (1761)
Q Consensus 1395 ~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~ 1474 (1761)
.|+++++.+ .++..+++.|+++++|+++++|+++..+++.. .....+++++|.+++||++++. ...+
T Consensus 238 ~G~~~v~~~-----~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~-------~~~~~~~~~lr~~~~gG~~~~~-~~~~ 304 (540)
T PRK05857 238 HGGLCVTGG-----ENTTSLLEILTTNAVATTCLVPTLLSKLVSEL-------KSANATVPSLRLVGYGGSRAIA-ADVR 304 (540)
T ss_pred cceeEEecC-----CChhHHHHHHHhcCcceEEeChHHHHHHHhcc-------ccCCCcCccceEEEEcCccCCc-hhHH
Confidence 999987643 47899999999999999999999999997642 1234578899999999999987 4443
Q ss_pred HHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEE
Q psy14338 1475 AFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVII 1554 (1761)
Q Consensus 1475 ~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v 1554 (1761)
+.+.+ | ..+++.||+||++..+.......+. . ...+.+++|+|++|++++|
T Consensus 305 -~~~~~---g---~~i~~~YG~TE~~~~~~~~~~~~~~--~--------------------~~~~~~~~G~~~~g~~v~i 355 (540)
T PRK05857 305 -FIEAT---G---VRTAQVYGLSETGCTALCLPTDDGS--I--------------------VKIEAGAVGRPYPGVDVYL 355 (540)
T ss_pred -HHHHh---C---CeeecccCCCcCCceeeeccccccc--c--------------------cccccCCcCcccCCcEEEE
Confidence 33333 3 5799999999976433211110000 0 0011245999999999999
Q ss_pred EcCCCCCC-----CCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1555 ANPETKGQ-----CGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1555 ~d~~~~~~-----~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
+|+++..+ +|.|+.|||+|+|++++.||++ +++.|.+.|. +|||+|||+|++ |+|
T Consensus 356 ~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~---~~~~t~~~~~---------~g~~~TGDlg~~------d~~-- 415 (540)
T PRK05857 356 AATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWN---NPERTAEVLI---------DGWVNTGDLLER------RED-- 415 (540)
T ss_pred ECccccCccccccCCCCCcceEEEeCcchhhhhhC---CccchhhhcC---------CCceeccceEEE------cCC--
Confidence 99764333 3568899999999999999999 9999999983 579999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCC--chhHhh
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN--ESEALD 1702 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~--~~~~~~ 1702 (1761)
|+ ++|.||.||+||++|+||+|.|||+ ++..||+|.+|+|++.. +.++++++.... ....++
T Consensus 416 ------g~----l~~~GR~~~~ik~~G~~v~p~eIE~-~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~ 484 (540)
T PRK05857 416 ------GF----FYIKGRSSEMIICGGVNIAPDEVDR-IAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARA 484 (540)
T ss_pred ------ce----EEEeccccccEecCCEEECHHHHHH-HHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHH
Confidence 99 9999999999999999999999999 89999999999999754 356666665321 111233
Q ss_pred HH----HHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1703 LV----PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1703 l~----~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
++ ++++++ |+ .|++|+.|++++ +||+|++||+||++|++.+...
T Consensus 485 l~~~~~~~~~~~-l~-~~~~P~~v~~~~--~iP~t~~GKi~r~~l~~~~~~~ 532 (540)
T PRK05857 485 LKHTIAARFRRE-SE-PMARPSTIVIVT--DIPRTQSGKVMRASLAAAATAD 532 (540)
T ss_pred HHHHHHHHHHhh-hc-cccCCeEEEEhh--cCCCCCCcceeHHHHHHhhhhc
Confidence 44 444554 77 999999999999 9999999999999999988443
|
|
| >PRK05852 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-57 Score=590.38 Aligned_cols=501 Identities=17% Similarity=0.199 Sum_probs=393.8
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++.+.+..++. ++|+++|+++.+ +.+.+||+||.++++++|++|.+. |+++||+|+|+++|++++++++|
T Consensus 16 ~~l~~~l~~~a~-----~~p~~~ai~~~~---~~~~~Ty~~l~~~~~~~a~~L~~~-gv~~gd~V~i~~~n~~~~~~~~l 86 (534)
T PRK05852 16 PRIADLVEVAAT-----RLPEAPALVVTA---DRIAISYRDLARLVDDLAGQLTRS-GLLPGDRVALRMGSNAEFVVALL 86 (534)
T ss_pred ccHHHHHHHHHH-----hCCCCcEEEecC---CCCcccHHHHHHHHHHHHHHHHhc-CCCCCCEEEEECCCcHHHHHHHH
Confidence 345555555554 779999998422 235799999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc---cccccccCC----cccc--CCC
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS---NVVDIKSWP----TILD--TDD 1313 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~--~~~ 1313 (1761)
||+++|++++|++|.++.+ ++.+++++++++++|++............. ..+...... .... ...
T Consensus 87 A~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (534)
T PRK05852 87 AASRADLVVVPLDPALPIA------EQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDA 160 (534)
T ss_pred HHHHcCcEEeecCCCCCcH------HHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeeccccccccccccccccc
Confidence 9999999999999988877 999999999999999876432211100000 000000000 0000 000
Q ss_pred CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHh
Q psy14338 1314 MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSV 1393 (1761)
Q Consensus 1314 ~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L 1393 (1761)
..............+++.++|+|||||||.||||+++|+++.+.+......+++.++|++++.+|++|..++...++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l 240 (534)
T PRK05852 161 ATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLATL 240 (534)
T ss_pred ccCCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHHH
Confidence 00000000011122467899999999999999999999999999999889999999999999999999999877788999
Q ss_pred hcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHH
Q psy14338 1394 YSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473 (1761)
Q Consensus 1394 ~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~ 1473 (1761)
+.|+++++.+.. .+++..+++.|+++++|+++++|+++..+.+.... .....+++++|.++++|+++++ .+.
T Consensus 241 ~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~~~lr~i~~~G~~~~~-~~~ 312 (534)
T PRK05852 241 ASGGAVLLPARG--RFSAHTFWDDIKAVGATWYTAVPTIHQILLERAAT-----EPSGRKPAALRFIRSCSAPLTA-ETA 312 (534)
T ss_pred hcCCeEEeCCCc--CcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccc-----ccccccCCCeeEEEECCCCCCH-HHH
Confidence 999998875532 47899999999999999999999999999764211 1123457899999999999999 788
Q ss_pred HHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEE
Q psy14338 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVI 1553 (1761)
Q Consensus 1474 ~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 1553 (1761)
+++.+.+. ..+++.||+||++..++........ . ...+ ....+.+|+ .+|++++
T Consensus 313 ~~~~~~~~------~~v~~~YG~tE~~~~~~~~~~~~~~----~--------------~~~~-~~~~g~~g~-~~g~~~~ 366 (534)
T PRK05852 313 QALQTEFA------APVVCAFGMTEATHQVTTTQIEGIG----Q--------------TENP-VVSTGLVGR-STGAQIR 366 (534)
T ss_pred HHHHHHhC------CChhhccCccccchhhhcCCccccc----c--------------ccCc-ccccccCCC-CCCCeEE
Confidence 88887764 5799999999986543322110000 0 0000 001123454 6899999
Q ss_pred EEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCC
Q psy14338 1554 IANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633 (1761)
Q Consensus 1554 v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~ 1633 (1761)
|+|++ ++++|.|+.|||+|+|+.+++||+| +|+.|++.| .++||+|||+|++ |+|
T Consensus 367 i~d~~-g~~~~~g~~Gel~v~g~~v~~gY~~---~~~~t~~~~---------~~g~~~TGD~~~~------d~d------ 421 (534)
T PRK05852 367 IVGSD-GLPLPAGAVGEVWLRGTTVVRGYLG---DPTITAANF---------TDGWLRTGDLGSL------SAA------ 421 (534)
T ss_pred EECCC-CCCCCCCCceEEEEecCcccchhcC---Ccccchhhh---------cCCCcccCceEEE------eCC------
Confidence 99976 7999999999999999999999999 999999998 3579999999999 999
Q ss_pred CCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHH
Q psy14338 1634 GVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLV 1707 (1761)
Q Consensus 1634 g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l 1707 (1761)
|+ +++.||+||+||++|.+|+|.|||. ++.+||+|.+|+|++. ++.++++|+... ...+.+++.++|
T Consensus 422 --G~----l~~~gR~~d~i~~~G~~v~~~~iE~-~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~~~~i~~~~ 494 (534)
T PRK05852 422 --GD----LSIRGRIKELINRGGEKISPERVEG-VLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPPTAEELVQFC 494 (534)
T ss_pred --Cc----EEEEecchhhEEECCEEECHHHHHH-HHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCCCHHHHHHHH
Confidence 99 9999999999999999999999999 8999999999999985 456788877643 345678999999
Q ss_pred HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1708 ~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
+++ || .|++|+.|++++ +||+|++||++|++|++.+.
T Consensus 495 ~~~-l~-~~~~P~~i~~v~--~iP~t~~GKi~r~~L~~~~~ 531 (534)
T PRK05852 495 RER-LA-AFEIPASFQEAS--GLPHTAKGSLDRRAVAEQFG 531 (534)
T ss_pred HHh-cc-cccCCeEEEEhh--hcCCCCCccccHHHHHHHhc
Confidence 987 88 999999999999 99999999999999999884
|
|
| >PRK08315 AMP-binding domain protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=598.26 Aligned_cols=499 Identities=18% Similarity=0.245 Sum_probs=402.2
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++.+.|...+. ++|+++|+.+.+ +++.+||+||.++++++|+.|.+. |+++|++|+++++|++++++++
T Consensus 15 ~~~l~~~l~~~~~-----~~~~~~ai~~~~---~~~~~Ty~~l~~~~~~~a~~L~~~-gi~~g~~V~i~~~~~~~~~~~~ 85 (559)
T PRK08315 15 EQTIGQLLDRTAA-----RYPDREALVYRD---QGLRWTYREFNEEVDALAKGLLAL-GIEKGDRVGIWAPNVPEWVLTQ 85 (559)
T ss_pred hccHHHHHHHHHH-----HCCCCeEEEEcC---CCeEEcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCChHHHHHH
Confidence 3456666666654 679999998533 457899999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH-----HHHhhhccc------------------c
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI-----KLLKSKEAS------------------N 1298 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~-----~~~~~~~~~------------------~ 1298 (1761)
|||+++|++++|++|..+.+ ++..+++++++++++++.... ..+...... .
T Consensus 86 la~~~~G~~~v~l~~~~~~~------~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (559)
T PRK08315 86 FATAKIGAILVTINPAYRLS------ELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRR 159 (559)
T ss_pred HHHHHhCeEEEecCccCCHH------HHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCcee
Confidence 99999999999999987777 999999999999999986431 111110000 0
Q ss_pred cccc--------ccCCccccCC-CCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCC
Q psy14338 1299 VVDI--------KSWPTILDTD-DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYP 1369 (1761)
Q Consensus 1299 ~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 1369 (1761)
.+.. ..+....... ...............+++++|++|||||||.||||.++|+++.+.+......+++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 239 (559)
T PRK08315 160 VIFLGDEKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTE 239 (559)
T ss_pred EEeecccCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCC
Confidence 0000 0000000000 000000001112345788999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhc
Q psy14338 1370 SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKA 1449 (1761)
Q Consensus 1370 ~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~ 1449 (1761)
+|+++...+++|.+++...++.++..|+++++... .+++..+++.++++++|+++++|+++..++... ..
T Consensus 240 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~---~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~-------~~ 309 (559)
T PRK08315 240 EDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE---GFDPLATLAAVEEERCTALYGVPTMFIAELDHP-------DF 309 (559)
T ss_pred CceEEEecCcHHHHHHHHHHHHHHhccceEEEecC---CCCHHHHHHHHHHcCCeEEecchHHHHHHHhCc-------cc
Confidence 99999999999999987888999999999997654 479999999999999999999999998886531 22
Q ss_pred cCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCccee
Q psy14338 1450 RNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSL 1529 (1761)
Q Consensus 1450 ~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1529 (1761)
...++++||.+++||++++. .+.+.+.+.++. ..+++.||+||++.++.......
T Consensus 310 ~~~~~~~lr~~~~~G~~~~~-~~~~~~~~~~~~-----~~l~~~YG~tE~~~~~~~~~~~~------------------- 364 (559)
T PRK08315 310 ARFDLSSLRTGIMAGSPCPI-EVMKRVIDKMHM-----SEVTIAYGMTETSPVSTQTRTDD------------------- 364 (559)
T ss_pred CCCCchhhheeEecCCCCCH-HHHHHHHHHcCC-----cceeEEEcccccccceeecCccc-------------------
Confidence 34568899999999999998 787888776642 45999999999876543221100
Q ss_pred cccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCce
Q psy14338 1530 VERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELY 1609 (1761)
Q Consensus 1530 ~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~ 1609 (1761)
+...+..++|+|++|++++|+|+++++++|.|+.|||+|+|+++++||++ +|+.+.+.| ..++|
T Consensus 365 -----~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy~~---~~~~~~~~~--------~~~~~ 428 (559)
T PRK08315 365 -----PLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVMKGYWN---DPEKTAEAI--------DADGW 428 (559)
T ss_pred -----chhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhhhhhcC---ChhHHhhcC--------CCCCC
Confidence 00112346999999999999998878999999999999999999999999 999998887 35789
Q ss_pred EeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----C
Q psy14338 1610 ARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----T 1684 (1761)
Q Consensus 1610 yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~ 1684 (1761)
|+|||+|++ ++| |+ ++|+||+||+||++|+||+|.|||+ ++.++|+|.+|+|++. +
T Consensus 429 ~~TGD~~~~------~~d--------g~----~~~~GR~d~~i~~~G~~v~~~eIE~-~l~~~~~v~~~~v~~~~~~~~~ 489 (559)
T PRK08315 429 MHTGDLAVM------DEE--------GY----VNIVGRIKDMIIRGGENIYPREIEE-FLYTHPKIQDVQVVGVPDEKYG 489 (559)
T ss_pred EEccceEEE------cCC--------ce----EEEEeeccceEEECCEEEcHHHHHH-HHHhCCCceEEEEEecCCCCCC
Confidence 999999999 999 99 9999999999999999999999999 8999999999999974 3
Q ss_pred CeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1685 NLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1685 ~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+.++++|+.. +...+.++++++++++ || .|++|..+++++ +||+|++||++|++|++++..
T Consensus 490 ~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~-~~~~P~~i~~v~--~lP~t~~GK~~r~~L~~~~~~ 551 (559)
T PRK08315 490 EEVCAWIILRPGATLTEEDVRDFCRGK-IA-HYKIPRYIRFVD--EFPMTVTGKIQKFKMREMMIE 551 (559)
T ss_pred eEEEEEEEeCCCCCCCHHHHHHHHHhh-cc-cccCCcEEEEcc--cCCCCCCCceeHHHHHHHHHh
Confidence 4677877764 3345677999999987 88 899999999999 999999999999999998644
|
|
| >PRK08279 long-chain-acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-57 Score=598.80 Aligned_cols=496 Identities=15% Similarity=0.137 Sum_probs=387.8
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
....++.+.|...+. ++|+++|++ .+++.+||+||.++++++|+.|.+. |+++|++|+|+++|++++++
T Consensus 34 ~~~~tl~~~l~~~a~-----~~p~~~Ai~-----~~~~~~Ty~eL~~~~~~la~~L~~~-g~~~gd~V~i~~~n~~~~v~ 102 (600)
T PRK08279 34 DSKRSLGDVFEEAAA-----RHPDRPALL-----FEDQSISYAELNARANRYAHWAAAR-GVGKGDVVALLMENRPEYLA 102 (600)
T ss_pred CCcccHHHHHHHHHH-----hCCCCcEEE-----eCCCcccHHHHHHHHHHHHHHHHhc-CCCCCCEEEEECCCCHHHHH
Confidence 334567777777665 779999999 6778999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccc-----cc--------ccCC
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVV-----DI--------KSWP 1306 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~-----~~--------~~~~ 1306 (1761)
++|||+++|++++|+++.+|.+ ++.+++++++++++|++.+....+......... .. ..+.
T Consensus 103 ~~lA~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (600)
T PRK08279 103 AWLGLAKLGAVVALLNTQQRGA------VLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYE 176 (600)
T ss_pred HHHHHHhcCcEEeecCCCCCHH------HHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHH
Confidence 9999999999999999988877 999999999999999998776655433211000 00 0000
Q ss_pred ccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHH
Q psy14338 1307 TILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFA 1386 (1761)
Q Consensus 1307 ~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 1386 (1761)
++...................+++++||+|||||||.||||+++|+++.+.+.+....+++.++|+++..+|++|.+++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~ 256 (600)
T PRK08279 177 DLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGT 256 (600)
T ss_pred HHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHH
Confidence 11000000000001111234678999999999999999999999999999999999999999999999999999999986
Q ss_pred HHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCC
Q psy14338 1387 LWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEE 1466 (1761)
Q Consensus 1387 ~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~ 1466 (1761)
..++.++..|+++++.+. +++..+++.++++++|++.++|++++.+++... .......++|.+ +|+.
T Consensus 257 ~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~-------~~~~~~~~l~~~--~g~~ 323 (600)
T PRK08279 257 VAWSSVLAAGATLALRRK----FSASRFWDDVRRYRATAFQYIGELCRYLLNQPP-------KPTDRDHRLRLM--IGNG 323 (600)
T ss_pred HHHHHHHhcCcEEEEcCC----CCHHHHHHHHHHhcceEEeehHHHHHHHHhCCC-------CccccCcceeEE--ecCC
Confidence 666777888888888763 789999999999999999999999999876321 122234567754 4777
Q ss_pred CChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccc
Q psy14338 1467 RPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKL 1546 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 1546 (1761)
+++ .+.++|.+.++. ..+++.||+||++..+...... ..++|++
T Consensus 324 l~~-~~~~~~~~~~~~-----~~l~~~YG~tE~~~~~~~~~~~------------------------------~~~~g~~ 367 (600)
T PRK08279 324 LRP-DIWDEFQQRFGI-----PRILEFYAASEGNVGFINVFNF------------------------------DGTVGRV 367 (600)
T ss_pred CCH-HHHHHHHHHhCc-----ceeeeeecccccceeecccCCC------------------------------Ccccccc
Confidence 888 788888877752 4699999999976532211100 0124443
Q ss_pred cC----C---------cEEEEEcCCC-CCCCCCCcceEEE--EcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceE
Q psy14338 1547 LP----G---------VKVIIANPET-KGQCGDSHLGEIW--VQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYA 1610 (1761)
Q Consensus 1547 ~~----~---------~~~~v~d~~~-~~~~p~G~~GEL~--i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~y 1610 (1761)
.+ + ....|.|.+. ..+++.|+.|||+ |+|++++.|| + +++.|.+.|+.+++. ++++||
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~---~~~~t~~~~~~~~~~--~~~~~~ 441 (600)
T PRK08279 368 PLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-T---DPEASEKKILRDVFK--KGDAWF 441 (600)
T ss_pred cccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc-C---CchhhHHHHhhcccC--CCCceE
Confidence 33 2 2223333321 2468999999998 7899999999 8 999999999877653 357899
Q ss_pred eeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC------
Q psy14338 1611 RTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT------ 1684 (1761)
Q Consensus 1611 rTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~------ 1684 (1761)
+|||+|++ |+| |+ ++|+||+||+||++|+||+|.|||+ ++.+||+|.+|+|++..
T Consensus 442 ~TGDlg~~------~~d--------G~----l~~~GR~~d~ik~~G~~i~p~eIE~-~l~~~p~V~~a~v~gv~~~~~~~ 502 (600)
T PRK08279 442 NTGDLMRD------DGF--------GH----AQFVDRLGDTFRWKGENVATTEVEN-ALSGFPGVEEAVVYGVEVPGTDG 502 (600)
T ss_pred eecceEEE------cCC--------cc----EEEecccCCeEEECCcccCHHHHHH-HHhcCCCcceEEEEEeecCCCCC
Confidence 99999999 999 99 9999999999999999999999999 88899999999998742
Q ss_pred CeEEEEEEe-CCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1685 NLLVVVVEL-DGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1685 ~~~~a~v~~-~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
...+++++. .+...+.++++++|+++ || .||+|..|++++ +||+|+|||++|++|++...+.
T Consensus 503 ~~~~~~vv~~~~~~~~~~~l~~~l~~~-L~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 503 RAGMAAIVLADGAEFDLAALAAHLYER-LP-AYAVPLFVRLVP--ELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred ccceeEEEecCCccCCHHHHHHHHHhh-Cc-cccCCeEEEeec--CCCCCcchhhhHHHHhhcCCCc
Confidence 233444443 34556778999999997 98 999999999999 9999999999999999876544
|
|
| >PRK06145 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-57 Score=585.51 Aligned_cols=476 Identities=18% Similarity=0.216 Sum_probs=390.9
Q ss_pred CCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1180 GAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
++|+++|+. ..++.+||.||.++++++|.+|.+. |+++|++|+++++|++++++++|||+++|++++|++|..+
T Consensus 14 ~~~~~~a~~-----~~~~~~ty~el~~~v~~~a~~L~~~-g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~ 87 (497)
T PRK06145 14 RTPDRAALV-----YRDQEISYAEFHQRILQAAGMLHAR-GIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPINYRLA 87 (497)
T ss_pred HCCCceEEE-----ECCcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccC
Confidence 679999998 5678999999999999999999999 9999999999999999999999999999999999999877
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccC
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVS 1339 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSG 1339 (1761)
.+ ++.++++++++++++++.+.............+............. . ...........++++++++||||
T Consensus 88 ~~------~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~a~i~~TSG 159 (497)
T PRK06145 88 AD------EVAYILGDAGAKLLLVDEEFDAIVALETPKIVIDAAAQADSRRLAQ-G-GLEIPPQAAVAPTDLVRLMYTSG 159 (497)
T ss_pred HH------HHHHHHHhcCCcEEEEccchhhhhhcccceEEecCcccchhHHHhc-c-CCCCCCCCCCCccceEEEEeCCC
Confidence 77 9999999999999999876644322110000000000000000000 0 00001112346789999999999
Q ss_pred CCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHH
Q psy14338 1340 TTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVS 1419 (1761)
Q Consensus 1340 STG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~ 1419 (1761)
|||.||||+++|+++...+......+++..+++++...|++|..++....+.+++.|+++++.+. +++..+++.++
T Consensus 160 TTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~ 235 (497)
T PRK06145 160 TTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHRE----FDPEAVLAAIE 235 (497)
T ss_pred CCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCc----CCHHHHHHHHH
Confidence 99999999999999988777777888999999999999988888876666788999999999874 68999999999
Q ss_pred hcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccccccccccc
Q psy14338 1420 QYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVN 1499 (1761)
Q Consensus 1420 ~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~ 1499 (1761)
++++|++.++|+++..++... .....+++++|.+++||++++. .+.+++.+.|+. ..+++.||+||+
T Consensus 236 ~~~~t~~~~~P~~~~~ll~~~-------~~~~~~~~~l~~~~~gG~~~~~-~~~~~~~~~~~~-----~~v~~~YG~tE~ 302 (497)
T PRK06145 236 RHRLTCAWMAPVMLSRVLTVP-------DRDRFDLDSLAWCIGGGEKTPE-SRIRDFTRVFTR-----ARYIDAYGLTET 302 (497)
T ss_pred HhCCeEEEehHHHHHHHHcCC-------CccccccccceEEEecCCCCCH-HHHHHHHHHcCC-----CceEEeecCccc
Confidence 999999999999999997632 1234567899999999999998 788888877643 579999999998
Q ss_pred ceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCccc
Q psy14338 1500 IAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNA 1579 (1761)
Q Consensus 1500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~ 1579 (1761)
+..+.......+ ....+++|+|+++++++|+|++ ++++|.|+.|||+++|+.++
T Consensus 303 ~~~~~~~~~~~~-------------------------~~~~~~~G~~~~~~~~~i~~~~-~~~~~~~~~Gel~v~g~~~~ 356 (497)
T PRK06145 303 CSGDTLMEAGRE-------------------------IEKIGSTGRALAHVEIRIADGA-GRWLPPNMKGEICMRGPKVT 356 (497)
T ss_pred CCcceeccCccc-------------------------cccCCCcccCCCCceEEEECCC-CCCCCCCCceEEEEECcchh
Confidence 654321110000 0012359999999999999965 78999999999999999999
Q ss_pred ccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeec
Q psy14338 1580 SGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRY 1659 (1761)
Q Consensus 1580 ~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI 1659 (1761)
.||+| +++.|++.|. ++||+|||+|++ |+| |+ ++++||+||+||++|++|
T Consensus 357 ~Gy~~---~~~~~~~~~~---------~~~~~TGDl~~~------~~~--------g~----l~~~GR~~~~i~~~G~~v 406 (497)
T PRK06145 357 KGYWK---DPEKTAEAFY---------GDWFRSGDVGYL------DEE--------GF----LYLTDRKKDMIISGGENI 406 (497)
T ss_pred hhhcC---ChHHHHHHHh---------CCCeeccceEEE------cCC--------Cc----EEEeccccceEEeCCeEE
Confidence 99999 9999999993 579999999999 999 99 999999999999999999
Q ss_pred ChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCC
Q psy14338 1660 HPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPIN 1733 (1761)
Q Consensus 1660 ~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t 1733 (1761)
+|.|||+ ++..+|+|.+++|++. ++.++++++... ...+..+++++++++ |+ .|++|..+++++ +||+|
T Consensus 407 ~~~~IE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-~~~~p~~i~~v~--~iP~t 481 (497)
T PRK06145 407 ASSEVER-VIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQR-LA-SFKVPRQLKVRD--ELPRN 481 (497)
T ss_pred CHHHHHH-HHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHHh-hh-cCCCCCEEEEec--cCCCC
Confidence 9999999 8999999999999974 456888887643 345667899999997 88 899999999999 99999
Q ss_pred CchhhhHHHHHHHH
Q psy14338 1734 SRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1734 ~~GKvdR~~L~~~~ 1747 (1761)
++||++|++|++++
T Consensus 482 ~~GKi~r~~l~~~~ 495 (497)
T PRK06145 482 PSGKVLKRVLRDEL 495 (497)
T ss_pred CcccccHHHHHHHh
Confidence 99999999999876
|
|
| >PLN02330 4-coumarate--CoA ligase-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-57 Score=591.72 Aligned_cols=495 Identities=17% Similarity=0.232 Sum_probs=391.9
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.+.+.+. ++|+++|+... .+++.+||+||.++++++|+.|.+. |+++|++|+++++|++++++++||
T Consensus 29 ~~~~~l~~~a~-----~~p~~~a~~~~---~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA 99 (546)
T PLN02330 29 TLPDFVLQDAE-----LYADKVAFVEA---VTGKAVTYGEVVRDTRRFAKALRSL-GLRKGQVVVVVLPNVAEYGIVALG 99 (546)
T ss_pred cHHHHHhhhhh-----cCCCccEEEec---CCCCcccHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCchHHHHHHHH
Confidence 34455555543 67999999831 1357899999999999999999999 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccc-c------cccCCccccCCCCcc
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVV-D------IKSWPTILDTDDMPK 1316 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~ 1316 (1761)
|+++|++++|+||.+|.+ ++.+++++++++++|++......+.......+. . ...|.+.+.....
T Consensus 100 ~~~~G~~~vpl~~~~~~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-- 171 (546)
T PLN02330 100 IMAAGGVFSGANPTALES------EIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWKELLEAADR-- 171 (546)
T ss_pred HHHhCcEeccCCccCCHH------HHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHHHHHhhccc--
Confidence 999999999999988777 999999999999999998876665443211100 0 0011111111000
Q ss_pred chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcC----CCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1317 KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELY----PSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1317 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
...........++++++|+|||||||.||||+++|+++.+.+... .+++. ..+..+.+.|++|.+++...++.+
T Consensus 172 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 249 (546)
T PLN02330 172 AGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSS--LFSVGPEMIGQVVTLGLIPFFHIYGITGICCAT 249 (546)
T ss_pred cCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHH--hhccCccccCceEEEEecChHHHHHHHHHHHHH
Confidence 000001223456899999999999999999999999998766532 23332 234677788888888876677889
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCC--cceEEEeecCCCChH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALG--CVRTCVVVAEERPRI 1470 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~--~Lr~v~~gGe~l~~~ 1470 (1761)
|..|+++++.+. +++..+++.++++++|++.++|+++..+++.. .....++. ++|.+++||+++++
T Consensus 250 l~~g~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------~~~~~~~~~~~l~~i~~~g~~l~~- 317 (546)
T PLN02330 250 LRNKGKVVVMSR----FELRTFLNALITQEVSFAPIVPPIILNLVKNP-------IVEEFDLSKLKLQAIMTAAAPLAP- 317 (546)
T ss_pred hhcCCEEEEecc----cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCc-------cccccccchheeeeEEEcCCcCCH-
Confidence 999999999874 78999999999999999999999999987531 11222333 57999999999999
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCc
Q psy14338 1471 HLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGV 1550 (1761)
Q Consensus 1471 ~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 1550 (1761)
.+.++|.+.|+. ..+++.||+||++.+...... +... .+.....++|+|++|+
T Consensus 318 ~~~~~~~~~~~~-----~~~~~~YG~tE~~~~~~~~~~-~~~~---------------------~~~~~~~~vG~~~~~~ 370 (546)
T PLN02330 318 ELLTAFEAKFPG-----VQVQEAYGLTEHSCITLTHGD-PEKG---------------------HGIAKKNSVGFILPNL 370 (546)
T ss_pred HHHHHHHHHcCC-----CeEEecccccccccceecCCC-cccc---------------------ccccccCccccccCCc
Confidence 888888887642 579999999997654321100 0000 0001124599999999
Q ss_pred EEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCC
Q psy14338 1551 KVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAP 1630 (1761)
Q Consensus 1551 ~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~ 1630 (1761)
+++|+|+++++++|.|+.|||+|+|++++.||+| +++.+++.| +.+|||+|||+|++ ++|
T Consensus 371 ~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~---~~~~~~~~~--------~~~g~~~TGD~~~~------~~d--- 430 (546)
T PLN02330 371 EVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYN---NKEETDRTI--------DEDGWLHTGDIGYI------DDD--- 430 (546)
T ss_pred EEEEEeCCCCccCCCCCceEEEEecchhhhhhcc---Cccchhhhc--------cCCCceecccEEEE------eCC---
Confidence 9999998778999999999999999999999999 999999887 46799999999999 899
Q ss_pred CCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHH
Q psy14338 1631 VPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLV 1704 (1761)
Q Consensus 1631 ~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~ 1704 (1761)
|+ ++|+||+||+||++|+||+|.|||+ ++.+||+|.+++|++. ++.++++|+... ...+.++++
T Consensus 431 -----G~----l~~~GR~~d~i~~~G~~v~~~~iE~-~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~ 500 (546)
T PLN02330 431 -----GD----IFIVDRIKELIKYKGFQVAPAELEA-ILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKESEEDIL 500 (546)
T ss_pred -----Cc----EEEEechHHhhhcCCEEECHHHHHH-HHHhCCchheEEEEeccccccCceeEEEEEECCCCCCCHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 456788887643 335567899
Q ss_pred HHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1705 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1705 ~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
++++++ |+ .||+|+.+++++ +||+|++||++|++|++++...
T Consensus 501 ~~~~~~-l~-~~~~p~~~~~v~--~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 501 NFVAAN-VA-HYKKVRVVQFVD--SIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred HHHHHh-cc-cccCceEEEEec--cCCCCCCcceeHHHHHHHHHhh
Confidence 999987 88 999999999999 9999999999999999998543
|
|
| >PRK07514 malonyl-CoA synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-57 Score=585.46 Aligned_cols=475 Identities=18% Similarity=0.219 Sum_probs=393.1
Q ss_pred CCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1180 GAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
.+|+++|+.. .+++.+||.||.++++++|+.|++. |+++||+|+++++|++++++++|||+++|++++|++|.++
T Consensus 14 ~~~~~~a~~~----~~~~~~Ty~eL~~~~~~la~~L~~~-g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~~~ 88 (504)
T PRK07514 14 ADRDAPFIET----PDGLRYTYGDLDAASARLANLLVAL-GVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTAYT 88 (504)
T ss_pred hCCCCeEEEe----CCCCEEcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCCCC
Confidence 4599999983 2567899999999999999999999 9999999999999999999999999999999999999877
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc----cccccc--CCccccCCCCccchhhhccCCCCCCCEEE
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN----VVDIKS--WPTILDTDDMPKKKLAALYRAPTAEMLAY 1333 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 1333 (1761)
.+ ++..+++.++++++|++......+....... ...... ...+.... .............+++++|
T Consensus 89 ~~------~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~ 160 (504)
T PRK07514 89 LA------ELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAA--AAAPDDFETVPRGADDLAA 160 (504)
T ss_pred HH------HHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhh--hhcCcccCcccCCCCCeEE
Confidence 77 9999999999999999987665543322111 000000 00000000 0000011123356789999
Q ss_pred EEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHH
Q psy14338 1334 LDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPAL 1413 (1761)
Q Consensus 1334 ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~ 1413 (1761)
|+|||||||.||||+++|+++.+.+......+++.++|+++...|++|..++...++.+++.|+++++.+. .++..
T Consensus 161 i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~ 236 (504)
T PRK07514 161 ILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPK----FDPDA 236 (504)
T ss_pred EEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCC----CCHHH
Confidence 99999999999999999999999998888889999999999999998888887778899999999999874 68999
Q ss_pred HHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccccc
Q psy14338 1414 WLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTS 1493 (1761)
Q Consensus 1414 l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~ 1493 (1761)
+++.+. ++|++..+|+++..+++. .......++++|.+++||+++++ .+.+.|.+.++ ..+++.
T Consensus 237 ~~~~i~--~~t~~~~~P~~~~~l~~~-------~~~~~~~~~~lr~~~~gg~~~~~-~~~~~~~~~~~------~~~~~~ 300 (504)
T PRK07514 237 VLALMP--RATVMMGVPTFYTRLLQE-------PRLTREAAAHMRLFISGSAPLLA-ETHREFQERTG------HAILER 300 (504)
T ss_pred HHHHHH--hheeeecHHHHHHHHHcC-------CCCCcccccceeeEEecCCCCCH-HHHHHHHHHhC------Ccceee
Confidence 999994 799999999999988753 12234567899999999999999 78788877663 469999
Q ss_pred ccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEE
Q psy14338 1494 FGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWV 1573 (1761)
Q Consensus 1494 yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i 1573 (1761)
||+||++..+..... ......++|+|++|++++|+|+++++++|.|+.|||+|
T Consensus 301 YG~tE~~~~~~~~~~---------------------------~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i 353 (504)
T PRK07514 301 YGMTETNMNTSNPYD---------------------------GERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEV 353 (504)
T ss_pred cccccccccccCCcc---------------------------ccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEE
Confidence 999997654322110 00012359999999999999987799999999999999
Q ss_pred cCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEE
Q psy14338 1574 QSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIM 1653 (1761)
Q Consensus 1574 ~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Ik 1653 (1761)
+|++++.||++ +++.+++.|. .++||+|||+|++ +++ |+ ++++||+||+||
T Consensus 354 ~~~~~~~gy~~---~~~~~~~~~~--------~~~~~~TGDl~~~------~~~--------g~----~~~~GR~~~~i~ 404 (504)
T PRK07514 354 KGPNVFKGYWR---MPEKTAEEFR--------ADGFFITGDLGKI------DER--------GY----VHIVGRGKDLII 404 (504)
T ss_pred ecCCccccccC---Cchhhhhhcc--------cCCCeeecceEEE------cCC--------cc----EEEeccccceEE
Confidence 99999999999 9999999993 4679999999999 899 99 999999999999
Q ss_pred eCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECC
Q psy14338 1654 LRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDP 1727 (1761)
Q Consensus 1654 i~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~ 1727 (1761)
++|++|+|.|||+ ++..+++|.+++|++. ++.++++++.. +...+.++++++++++ |+ .|++|..+++++
T Consensus 405 ~~G~~i~~~~IE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-l~-~~~~p~~i~~v~- 480 (504)
T PRK07514 405 SGGYNVYPKEVEG-EIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALKGR-LA-RFKQPKRVFFVD- 480 (504)
T ss_pred eCCeEECHHHHHH-HHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHHhh-cc-cCCCCcEEEEec-
Confidence 9999999999999 8999999999999974 45678888764 3344677899999997 88 999999999999
Q ss_pred CCccCCCchhhhHHHHHHHHH
Q psy14338 1728 GVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1728 ~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
++|+|++||++|++|++.+.
T Consensus 481 -~~p~t~~gK~~r~~l~~~~~ 500 (504)
T PRK07514 481 -ELPRNTMGKVQKNLLREQYA 500 (504)
T ss_pred -cCCCCCCcceeHHHHHHHHH
Confidence 99999999999999998873
|
|
| >TIGR02262 benz_CoA_lig benzoate-CoA ligase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-57 Score=585.42 Aligned_cols=489 Identities=19% Similarity=0.216 Sum_probs=398.0
Q ss_pred HHHHHHHH-hhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 83 LEAAIQRY-GSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 83 l~~~~~~~-a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
..+++.++ ++.+||++|++..+ +.+||.||.++++++|++|. +.|+++|++|+++++|+ .+++
T Consensus 6 ~~~~~~~~~~~~~p~~~a~~~~~------~~~ty~~l~~~~~~~a~~L~--------~~g~~~g~~v~l~~~~~--~~~~ 69 (508)
T TIGR02262 6 AEDLLDRNVVEGRGGKTAFIDDI------SSLSYGELEAQVRRLGAALR--------RLGVKREERVLLLMLDG--VDFP 69 (508)
T ss_pred HHHHHHHHHhcccCCceEEEeCC------ceeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHHH
Confidence 44555665 67799999998644 58999999999999999999 88999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCcceeEEec
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPKLTWFVTE 236 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 236 (1761)
++++||+++|++++|++|.++.+ ++.++++.+++++++++......+..... ..++.............+
T Consensus 70 ~~~~a~~~~G~~~v~l~~~~~~~-----~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (508)
T TIGR02262 70 IAFLGAIRAGIVPVALNTLLTAD-----DYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAE 144 (508)
T ss_pred HHHHHHHHcCcEEeeccCCCCHH-----HHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHH
Confidence 99999999999999999999876 89999999999999998765443321110 001111100000000000
Q ss_pred cccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHH-HHHHcCCCCCCeEEEccCCcchhhhHHHHH
Q psy14338 237 HLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRA-LTQACHYTEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
...... .........++++++|+|||||||.||||+++|+++...+.. ....++++++|+++..+|++|+.++...++
T Consensus 145 ~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~ 223 (508)
T TIGR02262 145 LLATES-EQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALT 223 (508)
T ss_pred HhhcCC-CccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHH
Confidence 111111 111122345789999999999999999999999999887765 456778999999999999999999876688
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQ 395 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~ 395 (1761)
.++..|+++++.++ .+++..+++.|+++++|++..+|. ++..++...........++|.+++| |+++++++.+.
T Consensus 224 ~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~-~~~~~~~~~~~~~~~~~~l~~~~~~--G~~l~~~~~~~ 297 (508)
T TIGR02262 224 FPMSVGATTVLMGE---RPTPDAVFDRLRRHQPTIFYGVPT-LYAAMLADPNLPAEDQVRLRLCTSA--GEALPAEVGQR 297 (508)
T ss_pred HHHHcCceEEEeCC---CCCHHHHHHHHHHHCCcEEecchH-HHHHHhcCccccccccccceeEEEc--CCCCCHHHHHH
Confidence 89999999999885 568999999999999999999974 6666665544334456789999999 99999999999
Q ss_pred HHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEE
Q psy14338 396 FLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIM 475 (1761)
Q Consensus 396 ~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 475 (1761)
|.+.+ |.+ +++.||+||++.+++..... .....++|+|++|+++
T Consensus 298 ~~~~~---~~~---v~~~YG~tE~~~~~~~~~~~------------------------------~~~~~~~G~~~~g~~v 341 (508)
T TIGR02262 298 WQARF---GVD---IVDGIGSTEMLHIFLSNLPG------------------------------DVRYGTSGKPVPGYRL 341 (508)
T ss_pred HHHHh---CCc---hhhCccccccCceeecCCcc------------------------------CCCCCCcCCCCCCcEE
Confidence 99988 443 99999999998655432210 1234579999999999
Q ss_pred EEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEecc
Q psy14338 476 TVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSR 555 (1761)
Q Consensus 476 ~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~ 555 (1761)
+|+|+++. ++|.|++|||+|+|++++.||+++|+.|++.|. ++||+|||++++++||.++|+||.
T Consensus 342 ~i~d~~~~--~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~-------------~~~~~TGD~~~~~~~g~~~~~gR~ 406 (508)
T TIGR02262 342 RLVGDGGQ--DVAAGEPGELLISGPSSATMYWNNRAKTRDTFQ-------------GEWTRSGDKYVRNDDGSYTYAGRT 406 (508)
T ss_pred EEECCCCC--CCCCCCeeEEEEecCccccccCCCHHHhHhhhh-------------cCceeccceEEEcCCccEEEeccc
Confidence 99998776 589999999999999999999999999998884 689999999999999999999999
Q ss_pred CCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC-----CCHHHHHHHHHHHHHHhh
Q psy14338 556 DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD-----CSEEESFQWMSRVLQAVD 629 (1761)
Q Consensus 556 d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~-----~~~~~l~~~l~~~Lp~y~ 629 (1761)
||+||++|.+|+|.|||+.|.+++++ .++++++.++ ...++++++++..++ ...++++++++++|+.|+
T Consensus 407 ~d~i~~~G~~v~~~~ie~~l~~~~~v-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~ 481 (508)
T TIGR02262 407 DDMLKVSGIYVSPFEIESALIQHPAV-----LEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDRLAPYK 481 (508)
T ss_pred cceeeeCCEEECHHHHHHHHHhCCCe-----eEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHhcccCC
Confidence 99999999999999999999999888 6888888764 356778888886553 236789999999999999
Q ss_pred hcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 630 SIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 630 ~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
+|..+ +.++++|+|++||++|++|++
T Consensus 482 ~p~~i-------~~~~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 482 YPRWI-------VFVDDLPKTATGKIQRFKLRE 507 (508)
T ss_pred CCceE-------EEecCCCCCCCCcEehhhccC
Confidence 99986 556999999999999999864
|
Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases. |
| >PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-57 Score=585.12 Aligned_cols=488 Identities=19% Similarity=0.230 Sum_probs=394.9
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++...|.+.+. .+|+++|++ .+++.+||+||.++++++|..|.+. |+++|++|+++++|++++++++
T Consensus 20 ~~~l~~~l~~~a~-----~~p~~~a~~-----~~~~~~Ty~el~~~v~~la~~L~~~-gi~~g~~V~v~~~n~~~~~~~~ 88 (542)
T PRK06155 20 ERTLPAMLARQAE-----RYPDRPLLV-----FGGTRWTYAEAARAAAAAAHALAAA-GVKRGDRVALMCGNRIEFLDVF 88 (542)
T ss_pred ccCHHHHHHHHHH-----HCCCCeEEE-----eCCccccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCChHHHHHH
Confidence 3455566666554 779999999 6778999999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc-----ccccccCCc-----cccC
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN-----VVDIKSWPT-----ILDT 1311 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~-----~~~~~~~~~-----~~~~ 1311 (1761)
|||+++|++++|++|.+|.+ ++..+++++++++++++.+....+....... .+....... ....
T Consensus 89 lA~~~~G~~~vpl~~~~~~~------~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (542)
T PRK06155 89 LGCAWLGAIAVPINTALRGP------QLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWST 162 (542)
T ss_pred HHHHHhCCEEEEeccccCHH------HHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccch
Confidence 99999999999999988777 9999999999999999987765554322110 000000000 0000
Q ss_pred CCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1312 DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1312 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
................++++++|+|||||||.||||+++|+++.+........+++.++++++...+++|..++ ..++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~-~~~~~ 241 (542)
T PRK06155 163 APLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNAL-NAFFQ 241 (542)
T ss_pred hhhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHH-HHHHH
Confidence 00000000011223467899999999999999999999999999888888888999999999999998888777 46789
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+++.|+++++.+. +++..++..|+++++|+++++|+++..+.+.. .......+++|.++.|| +++ .
T Consensus 242 ~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~-------~~~~~~~~~l~~~~~g~--~~~-~ 307 (542)
T PRK06155 242 ALLAGATYVLEPR----FSASGFWPAVRRHGATVTYLLGAMVSILLSQP-------ARESDRAHRVRVALGPG--VPA-A 307 (542)
T ss_pred HHHcCceEEeeCC----CCHHHHHHHHHHhCCcEEEchHHHHHHHHcCc-------CccccccCceEEEEEcC--CCH-H
Confidence 9999999998774 68999999999999999999999999887632 12334567899877666 455 6
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+.++ ..+++.||+||++.++..... .....++|+|+++++
T Consensus 308 ~~~~~~~~~~------~~v~~~YG~tE~~~~~~~~~~----------------------------~~~~~~vG~~~~~~~ 353 (542)
T PRK06155 308 LHAAFRERFG------VDLLDGYGSTETNFVIAVTHG----------------------------SQRPGSMGRLAPGFE 353 (542)
T ss_pred HHHHHHHHcC------CCEEeeecccccCccccCCCC----------------------------CCCCCCcCccCCCce
Confidence 7777776653 469999999998654322100 001234999999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcCC---cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQSP---HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g~---~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
++|+|++ ++++|.|+.|||+|+|+ +++.||++ +++.|.+.| .++||+|||+|++ ++|
T Consensus 354 ~~i~d~~-~~~~~~g~~Gei~v~~~~~~~~~~GY~~---~~~~~~~~~---------~~~~~~TGD~~~~------~~d- 413 (542)
T PRK06155 354 ARVVDEH-DQELPDGEPGELLLRADEPFAFATGYFG---MPEKTVEAW---------RNLWFHTGDRVVR------DAD- 413 (542)
T ss_pred EEEECCC-CCCCCCCCceEEEEecCCccccchhhcC---CHHHHHHhh---------cCCcEeccceEEE------cCC-
Confidence 9999965 89999999999999998 69999999 999999988 4789999999999 899
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhh
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALD 1702 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~ 1702 (1761)
|+ ++|+||+||+||++|.+|+|.|||+ ++.+||+|.+|+|++. ++.+.++++.. +...+..+
T Consensus 414 -------G~----l~i~GR~~d~i~~~G~~v~p~eIE~-~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 481 (542)
T PRK06155 414 -------GW----FRFVDRIKDAIRRRGENISSFEVEQ-VLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPVA 481 (542)
T ss_pred -------ce----EEEEecCCCEEEeCCEEECHHHHHH-HHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCCCHHH
Confidence 99 9999999999999999999999999 8999999999999874 34667777654 34566789
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
++++|+++ |+ .|++|..|++++ +||+|++||++|++|++++...+
T Consensus 482 ~~~~~~~~-l~-~~~~P~~i~~~~--~iP~t~~GKi~r~~l~~~~~~~~ 526 (542)
T PRK06155 482 LVRHCEPR-LA-YFAVPRYVEFVA--ALPKTENGKVQKFVLREQGVTAD 526 (542)
T ss_pred HHHHHHhh-Cc-CccCCcEEEEec--cCCCCcccceeHHHHHhhccCCc
Confidence 99999997 88 999999999999 99999999999999999775443
|
|
| >PRK06018 putative acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-57 Score=586.40 Aligned_cols=512 Identities=17% Similarity=0.198 Sum_probs=398.2
Q ss_pred cchhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCch
Q psy14338 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPI 158 (1761)
Q Consensus 79 ~~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~ 158 (1761)
.+-+++++|++.|+++||++++.... +|. .+++||+||.++++++|++|+ +.|+++||+|+++++|+ +
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~-~~~~Ty~el~~~v~~la~~L~--------~~g~~~gd~v~i~~~~~--~ 75 (542)
T PRK06018 8 WPLLCHRIIDHAARIHGNREVVTRSV-EGP-IVRTTYAQIHDRALKVSQALD--------RDGIKLGDRVATIAWNT--W 75 (542)
T ss_pred CCCCHHHHHHHHHHhCCCceEEEeec-cCC-ceEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCc--h
Confidence 35689999999999999999998532 121 168999999999999999999 89999999999999999 9
Q ss_pred hHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCC---cc
Q psy14338 159 NFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWP---KL 230 (1761)
Q Consensus 159 ~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~---~~ 230 (1761)
++++++|||+++|++++|++|.++.+ ++.++++++++++++++......+.+... ..++...+.. ..
T Consensus 76 ~~~~~~la~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (542)
T PRK06018 76 RHLEAWYGIMGIGAICHTVNPRLFPE-----QIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQT 150 (542)
T ss_pred HHHHHHHHHHhcCeEeeccccccCHH-----HHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEeccccccccc
Confidence 99999999999999999999999977 89999999999999998765433321110 0111111000 00
Q ss_pred ee---EE-eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHH-H-HHHHHHHHcCCCCCCeEEEccCC
Q psy14338 231 TW---FV-TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAML-S-HCRALTQACHYTEGENMVCVLDF 304 (1761)
Q Consensus 231 ~~---~~-~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~-~-~~~~~~~~~~~~~~d~~l~~~~~ 304 (1761)
.+ .. .+....... ........++++++|+|||||||.||||+++|++.+ + ........+++..+|+++.+.|+
T Consensus 151 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~ 229 (542)
T PRK06018 151 TLKNAVAYEEWIAEADG-DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPL 229 (542)
T ss_pred CccccccHHHHhccCCc-ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCH
Confidence 00 00 000000010 111123467889999999999999999999999743 2 22334556788999999999999
Q ss_pred cchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCC
Q psy14338 305 KRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDG 384 (1761)
Q Consensus 305 ~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~ 384 (1761)
+|+.++.. .+.++..|+++++... .+++..+++.++++++|++..+|+ ++..++........++++||.+++|
T Consensus 230 ~h~~~~~~-~~~~~~~g~~~v~~~~---~~~~~~~~~~l~~~~~t~~~~~p~-~~~~l~~~~~~~~~~~~~lr~~~~~-- 302 (542)
T PRK06018 230 FHANSWGI-AFSAPSMGTKLVMPGA---KLDGASVYELLDTEKVTFTAGVPT-VWLMLLQYMEKEGLKLPHLKMVVCG-- 302 (542)
T ss_pred HHHhhhHH-HHhhhhcCceEEccCc---CCCHHHHHHHHHhcCCceeecCcH-HHHHHHhcccccCCCcccceEEEEc--
Confidence 99988874 7888999999998753 678999999999999999999974 7766665544444567899999999
Q ss_pred CccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCccccc
Q psy14338 385 ANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQ 464 (1761)
Q Consensus 385 Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1761)
|+++++++.++|.+ + |.+ ++|.||+||++.+++........ .... .........
T Consensus 303 G~~l~~~~~~~~~~-~---~~~---~~~~YG~tE~~~~~~~~~~~~~~------------------~~~~-~~~~~~~~~ 356 (542)
T PRK06018 303 GSAMPRSMIKAFED-M---GVE---VRHAWGMTEMSPLGTLAALKPPF------------------SKLP-GDARLDVLQ 356 (542)
T ss_pred CCCCCHHHHHHHHH-h---CCC---eEeeecccccCcccccccCcccc------------------ccCC-chhhhhccc
Confidence 99999999999998 6 554 99999999998655432210000 0000 000011235
Q ss_pred ccCCCCCCcEEEEEeCCCCcccCCC--CCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEE
Q psy14338 465 DCGQVMPGCIMTVVKMDSPSYLCKT--DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGF 542 (1761)
Q Consensus 465 ~iG~p~~~~~~~I~d~~~~~~~~p~--G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~ 542 (1761)
++|+|++|++++|+|+++++ +|. +..|||+|+|++++.||+++ +.+.+ +.++||+|||+++
T Consensus 357 ~~G~~~~g~~i~v~d~~~~~--~~~~~~~~Gel~i~g~~~~~gy~~~---~~~~~------------~~~~~~~TGDl~~ 419 (542)
T PRK06018 357 KQGYPPFGVEMKITDDAGKE--LPWDGKTFGRLKVRGPAVAAAYYRV---DGEIL------------DDDGFFDTGDVAT 419 (542)
T ss_pred cCCCCCCCcEEEEECCCCCC--CCCCCCceeEEEEecCCcchhhhcC---cccEe------------cCCcEEEcCCEEE
Confidence 79999999999999999874 554 36899999999999999983 22333 2378999999999
Q ss_pred EeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHH
Q psy14338 543 LGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQ 619 (1761)
Q Consensus 543 ~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~ 619 (1761)
+++||+++|+||.||+||++|++|++.|||+.+.+++.+ .+|+|++.++. .++.++++++..++ .+.+++++
T Consensus 420 ~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 494 (542)
T PRK06018 420 IDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKV-----AEAAVIGVYHPKWDERPLLIVQLKPGETATREEILK 494 (542)
T ss_pred EcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcc-----eeEEEEeccCCCcCceeEEEEEeCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999988777 79999998854 56788888877654 56789999
Q ss_pred HHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCC
Q psy14338 620 WMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLH 670 (1761)
Q Consensus 620 ~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~ 670 (1761)
+++++|+.|++|..+ +.+++||+|++||++|++|++.+.+..++
T Consensus 495 ~~~~~l~~~~~P~~i-------~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 538 (542)
T PRK06018 495 YMDGKIAKWWMPDDV-------AFVDAIPHTATGKILKTALREQFKDYKLP 538 (542)
T ss_pred HHHhhCccccCCcEE-------EEeccCCCCCcchhhHHHHHHHHhccCCC
Confidence 999999999999986 44699999999999999999998764443
|
|
| >PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-57 Score=582.47 Aligned_cols=493 Identities=15% Similarity=0.209 Sum_probs=405.3
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
++.+++++++..+|+++|+...+ +.+||+||.++++++|..|. +.|+++|++|+++++++ .+++
T Consensus 3 ~~~~~l~~~a~~~p~~~~~~~~~------~~~t~~~l~~~~~~~a~~l~--------~~g~~~~~~v~~~~~~~--~~~~ 66 (503)
T PRK04813 3 DIIETIEEFAQTQPDFPAYDYLG------EKLTYGQLKEDSDALAAFID--------SLKLPDKSPIIVFGHMS--PEML 66 (503)
T ss_pred hHHHHHHHHHHhCCCceEEEeCC------cEEeHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCC--HHHH
Confidence 47789999999999999998754 58999999999999999999 89999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCC
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKT 241 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (1761)
+++|||+++|++++|+++.++.+ ++.++++.++++++++++......... ..+...+. .+... .
T Consensus 67 ~~~~a~~~~G~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~-~ 130 (503)
T PRK04813 67 ATFLGAVKAGHAYIPVDVSSPAE-----RIEMIIEVAKPSLIIATEELPLEILGI---PVITLDEL-------KDIFA-T 130 (503)
T ss_pred HHHHHHHHcCCEEecCCCCChHH-----HHHHHHHhcCCCEEEecccccccccCC---cEEehHHh-------hhhhh-c
Confidence 99999999999999999999876 899999999999999987652111000 01110000 00000 0
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcC
Q psy14338 242 PKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNG 321 (1761)
Q Consensus 242 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G 321 (1761)
...........++++++++|||||||.||||.++|+++...+.+....+++..+++++...|++|+.+++. ++.+|..|
T Consensus 131 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~g 209 (503)
T PRK04813 131 GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMD-LYPTLASG 209 (503)
T ss_pred cccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHH-HHHHHhcC
Confidence 11111123356789999999999999999999999999999988888899999999999999999999885 89999999
Q ss_pred cEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhh
Q psy14338 322 MHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQ 401 (1761)
Q Consensus 322 ~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~ 401 (1761)
+++++.+... ..++..+++.++++++|++..+|+ ++..++........+++++|.++++ |+++++.+.++|.+.++
T Consensus 210 ~~~v~~~~~~-~~~~~~~~~~~~~~~~t~~~~~p~-~~~~~~~~~~~~~~~~~~l~~i~~~--G~~l~~~~~~~~~~~~~ 285 (503)
T PRK04813 210 GTLVALPKDM-TANFKQLFETLPQLPINVWVSTPS-FADMCLLDPSFNEEHLPNLTHFLFC--GEELPHKTAKKLLERFP 285 (503)
T ss_pred CEEEEcChhh-hcCHHHHHHHHHHcCCeEEEeChH-HHHHHHHhhccCcccCCCceEEEEe--cCcCCHHHHHHHHHHCC
Confidence 9999988432 468999999999999999999974 6655544433445568899999999 99999999999999885
Q ss_pred hCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCC
Q psy14338 402 SKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMD 481 (1761)
Q Consensus 402 ~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~ 481 (1761)
. . .+++.||+||++...+..... ..........++|+|+++++++|+|++
T Consensus 286 ~--~---~~~~~yG~tE~~~~~~~~~~~-------------------------~~~~~~~~~~~~g~~~~~~~~~i~d~~ 335 (503)
T PRK04813 286 S--A---TIYNTYGPTEATVAVTSIEIT-------------------------DEMLDQYKRLPIGYAKPDSPLLIIDEE 335 (503)
T ss_pred C--c---eEEeCcccchheeEEEEEEec-------------------------ccccccCCCCcccccCCCCEEEEECCC
Confidence 2 2 499999999997544332211 000012235579999999999999998
Q ss_pred CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE
Q psy14338 482 SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV 561 (1761)
Q Consensus 482 ~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki 561 (1761)
+. ++|.|+.|||+|+|++++.||+++++.|.+.|..+ ++.+||+|||+|++ +||++++.||.||+||+
T Consensus 336 ~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~---------~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~ 403 (503)
T PRK04813 336 GT--KLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTF---------DGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKL 403 (503)
T ss_pred CC--CCCCCCceEEEEeccccccccCCChhHhHHhhccC---------CCceeEECCceEEe-eCCeEEEeccccceEEE
Confidence 86 58999999999999999999999999999998632 23679999999999 89999999999999999
Q ss_pred CCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC-CC-----HHHHHHHHHHHHHHhhhccee
Q psy14338 562 TGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD-CS-----EEESFQWMSRVLQAVDSIHQV 634 (1761)
Q Consensus 562 ~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~-~~-----~~~l~~~l~~~Lp~y~~P~~i 634 (1761)
+|++|+|.|||+.+..++.+ .+++|++.++ ..++.+++++++..+ .+ .++++++++++|+.|++|..+
T Consensus 404 ~G~~v~~~~iE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i 478 (503)
T PRK04813 404 NGYRIELEEIEQNLRQSSYV-----ESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKF 478 (503)
T ss_pred CcEEeCHHHHHHHHHhCCCc-----ceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEE
Confidence 99999999999999998887 7899998764 356788999887653 22 246899999999999999986
Q ss_pred eeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 635 GLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 635 ~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+.++++|+|+|||++|++|++.+.
T Consensus 479 -------~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 479 -------IYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred -------EEeccCCCCCCCCCcHHHHHHHhc
Confidence 556999999999999999998764
|
|
| >PRK13383 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-57 Score=585.11 Aligned_cols=475 Identities=14% Similarity=0.187 Sum_probs=388.0
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.+.|.++++++|+++|+.+.+ +.+||+||.++++++|+.|+ +.|+++|++|+++++|+ ++
T Consensus 34 ~~~~~~~~~~~a~~~p~~~a~~~~~------~~lTy~el~~~~~~la~~L~--------~~gi~~g~~V~i~~~~~--~~ 97 (516)
T PRK13383 34 GTNPYTLLAVTAARWPGRTAIIDDD------GALSYRELQRATESLARRLT--------RDGVAPGRAVGVMCRNG--RG 97 (516)
T ss_pred CCcHHHHHHHHHHHCCCCcEEEeCC------CcEeHHHHHHHHHHHHHHHH--------hcCCCCCCEEEEECCCC--HH
Confidence 3578999999999999999998644 48999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
+++++|||+++|+++||++|.++.+ ++.+++++++++++++++...+.+..... .+...+. ....
T Consensus 98 ~~~~~la~~~~G~v~vpl~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~---------~~~~ 162 (516)
T PRK13383 98 FVTAVFAVGLLGADVVPISTEFRSD-----ALAAALRAHHISTVVADNEFAERIAGADD-AVAVIDP---------ATAG 162 (516)
T ss_pred HHHHHHHHHHhCeEEEEcCccCCHH-----HHHHHHhcCCCCEEEEchhHHHHHHhhhc-ceEEecc---------chhh
Confidence 9999999999999999999999976 89999999999999998876544332211 1111100 0000
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHH--HHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHH
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSH--CRALTQACHYTEGENMVCVLDFKRETGLWHSVLTS 317 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~ 317 (1761)
.... ......+++.++|+|||||||+||||+++|+..... .......+++.++|+++..+|++|.+++.. ++.+
T Consensus 163 ~~~~---~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~-~~~~ 238 (516)
T PRK13383 163 AEES---GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGM-LMLT 238 (516)
T ss_pred hhcC---CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHH-HHHH
Confidence 0000 011123456789999999999999999999843222 122334567889999999999999999985 8999
Q ss_pred HhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCC--CCCCCCceeEEEecCCCccCCHHHHHH
Q psy14338 318 VLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDH--KDISLSSLRLLLVGDGANPWSLSSCDQ 395 (1761)
Q Consensus 318 L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~--~~~~l~~Lr~v~~gg~Ge~l~~~~~~~ 395 (1761)
+..|+++++.. .+++..+++.++++++|++.++|. ++..++..... ...+++++|.+++| |+++++++.++
T Consensus 239 l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~~~lr~i~~g--G~~l~~~~~~~ 311 (516)
T PRK13383 239 IALGGTVLTHR----HFDAEAALAQASLHRADAFTAVPV-VLARILELPPRVRARNPLPQLRVVMSS--GDRLDPTLGQR 311 (516)
T ss_pred HhcCCEEEECC----CCCHHHHHHHHHHhCCcEEEecHH-HHHHHHhccccccccCCCCceEEEEEC--CCCCCHHHHHH
Confidence 99999999877 689999999999999999999964 77777654321 12357899999999 99999999999
Q ss_pred HHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEE
Q psy14338 396 FLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIM 475 (1761)
Q Consensus 396 ~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 475 (1761)
|.+.+ |.+ ++|.||+||++..+...+.. ......++|+|++|+++
T Consensus 312 ~~~~~---g~~---v~~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~~G~~~~~~~~ 356 (516)
T PRK13383 312 FMDTY---GDI---LYNGYGSTEVGIGALATPAD-----------------------------LRDAPETVGKPVAGCPV 356 (516)
T ss_pred HHHHc---Cch---hhhcccccccccceeccccc-----------------------------cccCCCcccCCCCCcEE
Confidence 99988 443 99999999998655432210 01224679999999999
Q ss_pred EEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEecc
Q psy14338 476 TVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSR 555 (1761)
Q Consensus 476 ~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~ 555 (1761)
+|+|++++ +++.|+.|||+|+|+.++.||++++. +.+. ++||+|||+|++++||+++|+||+
T Consensus 357 ~i~d~~~~--~~~~g~~Gel~v~g~~~~~~Y~~~~~---~~~~-------------~g~~~TGDl~~~d~~G~l~i~GR~ 418 (516)
T PRK13383 357 RILDRNNR--PVGPRVTGRIFVGGELAGTRYTDGGG---KAVV-------------DGMTSTGDMGYLDNAGRLFIVGRE 418 (516)
T ss_pred EEECCCCC--CCCCCCceEEEEecCcccccccCCch---hhee-------------cCceecceeEEEcCCccEEEeccc
Confidence 99999886 58999999999999999999998763 2221 689999999999999999999999
Q ss_pred CCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcc
Q psy14338 556 DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIH 632 (1761)
Q Consensus 556 d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~ 632 (1761)
||+||++|++|+|.|||..|.+++.+ .+++|++.++ ..++.++++++..+. .+.++++++++++|+.|++|.
T Consensus 419 ~~~i~~~G~~v~~~eiE~~l~~~~~v-----~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~ 493 (516)
T PRK13383 419 DDMIISGGENVYPRAVENALAAHPAV-----ADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKDRVSRFEQPR 493 (516)
T ss_pred cceEEECCEEECHHHHHHHHHhCCCe-----eEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCc
Confidence 99999999999999999999988877 7999999874 467888899887653 457899999999999999999
Q ss_pred eeeeeEEEEeCCCCccCCCCCcccHHHHH
Q psy14338 633 QVGLYCLALVPPNYLPKTPLGGIHLSECK 661 (1761)
Q Consensus 633 ~i~~~~v~~v~~~~lP~t~~GKidR~~L~ 661 (1761)
.+ +.+++||+|++||++|++|+
T Consensus 494 ~i-------~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 494 DI-------NIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EE-------EEeCCCCCCCCCcCcHHHhC
Confidence 86 44589999999999999874
|
|
| >PRK13388 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-56 Score=583.03 Aligned_cols=469 Identities=14% Similarity=0.148 Sum_probs=373.9
Q ss_pred CCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1181 APVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKI-NTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1181 ~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv-~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
+|+++|++ +.+..+||+||.++++++|..|.+. |+ ++|++|+++++|++++++++|||+++|++++||||.+|
T Consensus 14 ~p~~~Al~-----~~~~~lTy~el~~~~~~la~~L~~~-g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p~~~ 87 (540)
T PRK13388 14 GDDTIAVR-----YGDRTWTWREVLAEAAARAAALIAL-ADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNTTRR 87 (540)
T ss_pred cCCceEEE-----ECCceeeHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecccCC
Confidence 49999998 5678999999999999999999999 99 89999999999999999999999999999999999888
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc--cccccc--ccCCccccCCCCccchhhhccCCCCCCCEEEEE
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA--SNVVDI--KSWPTILDTDDMPKKKLAALYRAPTAEMLAYLD 1335 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii 1335 (1761)
.+ ++.+++++++++++|++......+..... ...+.. ..+...+... ....+.....++++++|+
T Consensus 88 ~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~i~ 156 (540)
T PRK13388 88 GA------ALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAAA-----GALTPHREVDAMDPFMLI 156 (540)
T ss_pred hH------HHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhccc-----cCcCCCCCCCCCCeEEEE
Confidence 88 99999999999999998876655443210 011111 0111111100 001111235679999999
Q ss_pred eccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHH
Q psy14338 1336 FSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWL 1415 (1761)
Q Consensus 1336 ~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~ 1415 (1761)
|||||||+||||+++|+++.+.+......+++.++|+++..+|++|..++...++.+|..|+++++.+. +++..++
T Consensus 157 ~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~ 232 (540)
T PRK13388 157 FTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAK----FSASGFL 232 (540)
T ss_pred ECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCC----CCHHHHH
Confidence 999999999999999999999998888999999999999999999988876555668999999988763 6899999
Q ss_pred HHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccccccc
Q psy14338 1416 SAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFG 1495 (1761)
Q Consensus 1416 ~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG 1495 (1761)
+.|+++++|++..+|+.+..++... ........+++. ++ |+++++ ...+++.+.++ ..+++.||
T Consensus 233 ~~i~~~~vt~~~~~p~~l~~l~~~~-------~~~~~~~~~l~~-~~-G~~~~~-~~~~~~~~~~~------~~l~~~YG 296 (540)
T PRK13388 233 DDVRRYGATYFNYVGKPLAYILATP-------ERPDDADNPLRV-AF-GNEASP-RDIAEFSRRFG------CQVEDGYG 296 (540)
T ss_pred HHHHHhCCeEEEehHHHHHHHHhCC-------CCccccccceEE-EE-CCCCCH-HHHHHHHHHhC------Cceecccc
Confidence 9999999999999999998886531 111122345664 34 455566 56667766653 57999999
Q ss_pred ccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEE-----------EEcCCCCCCC-
Q psy14338 1496 CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVI-----------IANPETKGQC- 1563 (1761)
Q Consensus 1496 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~-----------v~d~~~~~~~- 1563 (1761)
+||++.++..... ....++|+|++|++++ ++|. +++++
T Consensus 297 ~tE~~~~~~~~~~-----------------------------~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~-~g~~~~ 346 (540)
T PRK13388 297 SSEGAVIVVREPG-----------------------------TPPGSIGRGAPGVAIYNPETLTECAVARFDA-HGALLN 346 (540)
T ss_pred cccccceeecCCC-----------------------------CCCCCCCCCCCCcEEEcCCCCccccceeccC-cccccc
Confidence 9998765432100 0123599999997653 3442 24444
Q ss_pred CCCcceEEEEc-CCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceE
Q psy14338 1564 GDSHLGEIWVQ-SPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAV 1642 (1761)
Q Consensus 1564 p~G~~GEL~i~-g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l 1642 (1761)
+.|.+|||+++ |++++.||+| +|+.|++.| .+|||+|||+|++ |+| |+ +
T Consensus 347 ~~~~~GEl~v~~g~~~~~gY~~---~~~~t~~~~---------~~g~~~TGD~~~~------~~d--------g~----l 396 (540)
T PRK13388 347 ADEAIGELVNTAGAGFFEGYYN---NPEATAERM---------RHGMYWSGDLAYR------DAD--------GW----I 396 (540)
T ss_pred CCCcceEEEEecCCcccccccC---ChHHHHHHh---------hcCceeccceEEE------cCC--------Cc----E
Confidence 45789999998 9999999999 999999998 3579999999999 999 99 9
Q ss_pred EEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHH-Hhhhc
Q psy14338 1643 FVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNA-VLEEH 1715 (1761)
Q Consensus 1643 ~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~-~Lp~~ 1715 (1761)
+++||+||+||++|+||+|.|||+ ++..||+|.+|+|++. ++.++++++.. +...+.++++++++.+ .|+ .
T Consensus 397 ~i~GR~~d~i~~~G~~v~p~eIE~-~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~l~~~~~l~-~ 474 (540)
T PRK13388 397 YFAGRTADWMRVDGENLSAAPIER-ILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFDPDAFAAFLAAQPDLG-T 474 (540)
T ss_pred EEeccCCceEEECCEEeCHHHHHH-HHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCCHHHHHHHHHhhccCC-c
Confidence 999999999999999999999999 8999999999999985 44666666653 3446677899999753 388 8
Q ss_pred CceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1716 HLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1716 ~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
||+|..+++++ +||+|++||++|++|++...+.
T Consensus 475 ~~~P~~~~~v~--~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 475 KAWPRYVRIAA--DLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred ccCCcEEEEec--cCCCCCcceeeHHhHHHhccCC
Confidence 99999999999 9999999999999999976443
|
|
| >PRK05605 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-57 Score=592.11 Aligned_cols=490 Identities=21% Similarity=0.265 Sum_probs=394.6
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++.+.+.+++. ++|+++|+. ..++.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++|
T Consensus 32 ~~l~~~~~~~~~-----~~p~~~a~~-----~~~~~~Ty~ql~~~~~~~A~~L~~~-gi~~gd~V~l~~~n~~~~~~~~l 100 (573)
T PRK05605 32 TTLVDLYDNAVA-----RFGDRPALD-----FFGATTTYAELGKQVRRAAAGLRAL-GVRPGDRVAIVLPNCPQHIVAFY 100 (573)
T ss_pred CCHHHHHHHHHH-----HCCCCeEEE-----eCCCcccHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCCHHHHHHHH
Confidence 355556655554 789999999 5567899999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----cccccc---------------
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----NVVDIK--------------- 1303 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~--------------- 1303 (1761)
||+++|++++|++|.++.+ ++.+++++++++++|++......+...... .++...
T Consensus 101 A~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 174 (573)
T PRK05605 101 AVLRLGAVVVEHNPLYTAH------ELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRL 174 (573)
T ss_pred HHHhcCcEEeecCcCCCHH------HHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccc
Confidence 9999999999999987777 999999999999999987654443322110 000000
Q ss_pred --------------------cCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHH
Q psy14338 1304 --------------------SWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL 1363 (1761)
Q Consensus 1304 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~ 1363 (1761)
.|..+..... .............++++++++|||||||.||||+++|+++...+.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~ 253 (573)
T PRK05605 175 PIPALRKARAALTGPAPGTVPWETLVDAAI-GGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKA 253 (573)
T ss_pred ccccccccccccccCCCcceeHHHHhhccc-cccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHh
Confidence 0000000000 0000001112345789999999999999999999999999887766554
Q ss_pred HcC-c-CCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhc
Q psy14338 1364 ACE-L-YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLS 1441 (1761)
Q Consensus 1364 ~~~-~-~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~ 1441 (1761)
.+. + ..+++++...|++|.+++...++.+++.|+++++.+. ++++.+++.|+++++|++.++|++++.|++..
T Consensus 254 ~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~- 328 (573)
T PRK05605 254 WVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPA----PDIDLILDAMKKHPPTWLPGVPPLYEKIAEAA- 328 (573)
T ss_pred hccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCC----CCHHHHHHHHHHhCCEEEEchHHHHHHHHhCc-
Confidence 432 2 2357788888888888887778888999999999874 68999999999999999999999999997632
Q ss_pred CCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccc
Q psy14338 1442 GSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRA 1521 (1761)
Q Consensus 1442 ~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~ 1521 (1761)
.....++++||.+++||+++++ .+.++|.+.+. ..+++.||+||++.++..+....
T Consensus 329 ------~~~~~~~~~lr~i~~gg~~l~~-~~~~~~~~~~~------~~i~~~YG~TE~~~~~~~~~~~~----------- 384 (573)
T PRK05605 329 ------EERGVDLSGVRNAFSGAMALPV-STVELWEKLTG------GLLVEGYGLTETSPIIVGNPMSD----------- 384 (573)
T ss_pred ------cccCCCchhccEEEECCCcCCH-HHHHHHHHHhC------CCeecccccchhchhhhcCCccc-----------
Confidence 2244567899999999999998 77777777653 57999999999876554322110
Q ss_pred cccCcceecccCCCCccceeccccccCCcEEEEEcCCC-CCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhc
Q psy14338 1522 LRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPET-KGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARL 1600 (1761)
Q Consensus 1522 ~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~-~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p 1600 (1761)
..+.+++|+|++|++++|+|+++ ++++|.|..|||+|+|+.++.||++ +++.|.+.|.
T Consensus 385 ---------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~---~~~~~~~~~~--- 443 (573)
T PRK05605 385 ---------------DRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWN---RPEETAKSFL--- 443 (573)
T ss_pred ---------------CCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcC---ChhHhhhccc---
Confidence 01123599999999999999876 5899999999999999999999999 9999999882
Q ss_pred ccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEE
Q psy14338 1601 VTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAV 1680 (1761)
Q Consensus 1601 ~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~V 1680 (1761)
++||+|||+|++ +++ |+ ++|+||+||+||++|++|+|.|||+ ++..|+.|.+++|
T Consensus 444 ------~g~~~TGD~~~~------~~~--------g~----l~i~gR~dd~i~~~G~~v~p~eIE~-~l~~~~~i~~~~v 498 (573)
T PRK05605 444 ------DGWFRTGDVVVM------EED--------GF----IRIVDRIKELIITGGFNVYPAEVEE-VLREHPGVEDAAV 498 (573)
T ss_pred ------CCCcccCCEEEE------cCC--------Cc----EEEEeccccceeeCCEEECHHHHHH-HHHhCcccceEEE
Confidence 459999999999 999 99 9999999999999999999999999 8999999999999
Q ss_pred Eee-----CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1681 FTW-----TNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1681 v~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
++. ++.+++++++. +...+.++|+++++++ |+ .|++|..+++++ +||+|.+||++|++|++++.+
T Consensus 499 ~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~-l~-~~~~p~~i~~~~--~iP~t~~GKi~r~~L~~~~~~ 569 (573)
T PRK05605 499 VGLPREDGSEEVVAAVVLEPGAALDPEGLRAYCREH-LT-RYKVPRRFYHVD--ELPRDQLGKVRRREVREELLE 569 (573)
T ss_pred EeeecccCCeEEEEEEEECCCCCCCHHHHHHHHHHh-Cc-cccCCcEEEEec--cCCCCCcccccHHHHHHHHHH
Confidence 974 35778877764 3345678899999987 88 899999999999 999999999999999998843
|
|
| >PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-57 Score=580.51 Aligned_cols=474 Identities=18% Similarity=0.187 Sum_probs=390.4
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++++.|.+++. ++||++|+. +.++.+||+||.++++++|++|.+. |+++|++|+++++|++++++++||
T Consensus 3 ~~~~~l~~~a~-----~~p~~~a~~-----~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~~~~v~i~~~~~~~~~~~~la 71 (483)
T PRK03640 3 TMPNWLKQRAF-----LTPDRTAIE-----FEEKKVTFMELHEAVVSVAGKLAAL-GVKKGDRVALLMKNGMEMILVIHA 71 (483)
T ss_pred cHHHHHHHHHH-----hCCCceEEE-----eCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHH
Confidence 34555665554 679999999 6678999999999999999999999 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhcc
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALY 1323 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1323 (1761)
|+++|++++|+++..|.+ ++..++++++++++|++............. . +.++...... .....
T Consensus 72 ~~~~G~~~v~i~~~~~~~------~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~---~---~~~~~~~~~~----~~~~~ 135 (483)
T PRK03640 72 LQQLGAVAVLLNTRLSRE------ELLWQLDDAEVKCLITDDDFEAKLIPGISV---K---FAELMNGPKE----EAEIQ 135 (483)
T ss_pred HHhCCcEEEecCcCCCHH------HHHHHHHhCCCCEEEEcchhhHHHhhhccc---c---HHHHhhcccc----cCCCC
Confidence 999999999999977776 999999999999999987665443321110 0 1111111000 00111
Q ss_pred CCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeC
Q psy14338 1324 RAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 1403 (1761)
Q Consensus 1324 ~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~ 1403 (1761)
....++++++++|||||||.||||+++|+++...+......+++.++|+++..+|++|..++ ..++.++..|+++++.+
T Consensus 136 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~ 214 (483)
T PRK03640 136 EEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGL-SILMRSVIYGMRVVLVE 214 (483)
T ss_pred CCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHH-HHHHHHHhcCCEEEecC
Confidence 23467899999999999999999999999999888888888999999999999998887776 45788999999999987
Q ss_pred CCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhC
Q psy14338 1404 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 1483 (1761)
Q Consensus 1404 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~ 1483 (1761)
. +++..+++.|+++++|++.++|+++..+++.+. ......+||.+++||+++++ .+.+.+.+.
T Consensus 215 ~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~--------~~~~~~~lr~~~~~g~~~~~-~~~~~~~~~---- 277 (483)
T PRK03640 215 K----FDAEKINKLLQTGGVTIISVVSTMLQRLLERLG--------EGTYPSSFRCMLLGGGPAPK-PLLEQCKEK---- 277 (483)
T ss_pred C----CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcC--------ccccCCcceEEEEcCCCCCH-HHHHHHHHh----
Confidence 4 689999999999999999999999999976321 11234689999999999998 666666542
Q ss_pred CCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCC
Q psy14338 1484 GLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQC 1563 (1761)
Q Consensus 1484 g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~ 1563 (1761)
| ..+++.||+||++..+...... ......+++|+|+++++++|+|+ ++++
T Consensus 278 ~---~~~~~~YG~tE~~~~~~~~~~~-------------------------~~~~~~~~vG~p~~~~~~~i~~~--~~~~ 327 (483)
T PRK03640 278 G---IPVYQSYGMTETASQIVTLSPE-------------------------DALTKLGSAGKPLFPCELKIEKD--GVVV 327 (483)
T ss_pred C---CCeeeeeccCcccccccccCcc-------------------------cccccCCCcccccCCcEEEEecC--CCcC
Confidence 3 5799999999965422111000 00112356999999999999984 4899
Q ss_pred CCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEE
Q psy14338 1564 GDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVF 1643 (1761)
Q Consensus 1564 p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~ 1643 (1761)
|.|+.|||+|+|++++.||++ +|+.+++.| .++||+|||+|++ ++| |+ ++
T Consensus 328 ~~g~~Gel~v~g~~~~~gy~~---~~~~~~~~~---------~~~~~~tGDl~~~------~~~--------g~----l~ 377 (483)
T PRK03640 328 PPFEEGEIVVKGPNVTKGYLN---REDATRETF---------QDGWFKTGDIGYL------DEE--------GF----LY 377 (483)
T ss_pred CCCCceEEEEECcchhhhhcC---CHHHHHHHH---------hcCCeeccceEEE------cCC--------CC----EE
Confidence 999999999999999999999 999999998 3689999999999 999 99 99
Q ss_pred EEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCce
Q psy14338 1644 VVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHHLI 1718 (1761)
Q Consensus 1644 ~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~v 1718 (1761)
++||+||+||++|.+|+|.|||+ ++..+|+|.+++|++.. +.++++++. +...+.++++++|++. |+ .|++
T Consensus 378 ~~GR~~~~i~~~G~~v~~~~ie~-~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~-l~-~~~~ 453 (483)
T PRK03640 378 VLDRRSDLIISGGENIYPAEIEE-VLLSHPGVAEAGVVGVPDDKWGQVPVAFVVK-SGEVTEEELRHFCEEK-LA-KYKV 453 (483)
T ss_pred EeecccCeEEeCCEEECHHHHHH-HHHhCCCeeEEEEEeCCCcccCCceEEEEEe-CCCCCHHHHHHHHHHh-cc-CCCC
Confidence 99999999999999999999999 88999999999999743 356666664 3456778999999987 88 9999
Q ss_pred eeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1719 VGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1719 P~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
|..|++++ +||+|++||++|++|++.+.
T Consensus 454 p~~i~~~~--~iP~t~~gK~~r~~l~~~~~ 481 (483)
T PRK03640 454 PKRFYFVE--ELPRNASGKLLRHELKQLVE 481 (483)
T ss_pred CcEEEEeC--CCCCCCccceeHHHHHHHHh
Confidence 99999999 99999999999999999875
|
|
| >TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-57 Score=587.27 Aligned_cols=483 Identities=16% Similarity=0.208 Sum_probs=391.4
Q ss_pred cccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHH
Q psy14338 1165 GYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 1244 (1761)
Q Consensus 1165 ~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~ 1244 (1761)
+.+.|.+++. ++|+++|++ ++++++||+||.++++++|..|.+. |+++|++|+++++|++++++++|||
T Consensus 25 l~~~~~~~a~-----~~p~~~a~~-----~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~~~~~~~la~ 93 (527)
T TIGR02275 25 LTDILRDQAA-----RYPDAIAII-----CGNRQWSYRELDQRADNLAAGLTKL-GIGQGDTAVVQLPNIAEFYIVFFAL 93 (527)
T ss_pred HHHHHHHHHH-----HCCCceEEE-----eCCceecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHHHHH
Confidence 4445555443 679999998 6778999999999999999999999 9999999999999999999999999
Q ss_pred HHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH-----HHHhhhcc----cccccccc-C---CccccC
Q psy14338 1245 LYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI-----KLLKSKEA----SNVVDIKS-W---PTILDT 1311 (1761)
Q Consensus 1245 l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~-----~~~~~~~~----~~~~~~~~-~---~~~~~~ 1311 (1761)
+++|+++++++|.++.+ +++++++.+++++++++.... ........ ...+.... . ......
T Consensus 94 ~~~G~~~v~~~~~~~~~------~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (527)
T TIGR02275 94 LKLGIAPVLALFSHRKS------ELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLW 167 (527)
T ss_pred HHcCeEEeccccccCHH------HHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHH
Confidence 99999999999877776 999999999999999986431 11111100 00000000 0 000000
Q ss_pred CCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHH-HHH
Q psy14338 1312 DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFAL-WVL 1390 (1761)
Q Consensus 1312 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~ 1390 (1761)
.... ..........++++++|+|||||||.||||+++|+++...+......+.++++|+++..+|++|.+++.. .++
T Consensus 168 ~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~ 245 (527)
T TIGR02275 168 LESP--AEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGAL 245 (527)
T ss_pred hhCc--CccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHH
Confidence 0000 0011123456789999999999999999999999999999998888899999999999999998888754 478
Q ss_pred HHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChH
Q psy14338 1391 SSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRI 1470 (1761)
Q Consensus 1391 ~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~ 1470 (1761)
.++..|+++++.+. +++..+++.++++++|+++.+|+++..+++.. .....++++||.+++||++++.
T Consensus 246 ~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------~~~~~~~~~lr~~~~gG~~l~~- 313 (527)
T TIGR02275 246 GVFYAGGCVVLAPD----PSPTDCFPLIERHKVTVTALVPPAVALWMQAA-------SKSRYDLSSLKLLQVGGAKFSE- 313 (527)
T ss_pred HHHhcCCeEEECCC----CCHHHHHHHHHHhCCeEEEecHHHHHHHHhCc-------cccCCCccceEEEEEcCCCCCH-
Confidence 88999999988764 68999999999999999999999999887642 1234567899999999999999
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccccc-CC
Q psy14338 1471 HLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL-PG 1549 (1761)
Q Consensus 1471 ~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~ 1549 (1761)
.+.+++.+.+. ..+++.||+||+.... ..... +......++|+|+ ++
T Consensus 314 ~~~~~~~~~~g------~~~~~~YG~tE~~~~~-~~~~~-------------------------~~~~~~~~~G~~~~~~ 361 (527)
T TIGR02275 314 AAARRVPAVFG------CQLQQVFGMAEGLVNY-TRLDD-------------------------PAEIIFTTQGRPMSPD 361 (527)
T ss_pred HHHHHHHHHhC------CeEEeeeccCccCccc-cCCCC-------------------------ccccccccCCCCCCCC
Confidence 78888877663 4799999999953211 10000 0011234589999 48
Q ss_pred cEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1550 VKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1550 ~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
..++|+|++ ++++|.|+.|||+|+|+.++.||+| +|+.|.+.| ..+|||+|||+|++ ++|
T Consensus 362 ~~v~i~d~~-g~~~~~g~~Gei~v~g~~~~~gY~~---~~~~~~~~~--------~~dg~~~TGDl~~~------~~~-- 421 (527)
T TIGR02275 362 DEVRVVDDH-GNPVAPGETGMLLTRGPYTFRGYYK---APEHNAAAF--------DAEGFYYTGDLVRL------TPE-- 421 (527)
T ss_pred ceEEEECCC-CCCCCCCCceEEEecCCccchhhcC---ChhHhHhhc--------CcCCCEEcCceEEE------cCC--
Confidence 999999965 8999999999999999999999999 999999988 45789999999999 899
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHH
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLV 1704 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~ 1704 (1761)
|+ ++++||.||+||++|++|+|.|||+ +|.+||+|.+|+|++. ++.++++|+......+..+|+
T Consensus 422 ------g~----l~~~gR~~d~i~~~G~~v~~~eiE~-~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~~~~~~l~ 490 (527)
T TIGR02275 422 ------GY----IVVVGRAKDQINRGGEKIAAEEIEN-LLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDPALKAAQLR 490 (527)
T ss_pred ------cc----EEEEecccceeecCCEEECHHHHHH-HHHhCCCceEEEEEecCCcccccEEEEEEEECCCCCCHHHHH
Confidence 99 9999999999999999999999999 8999999999999975 346788888765556778999
Q ss_pred HHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHH
Q psy14338 1705 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 1744 (1761)
Q Consensus 1705 ~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~ 1744 (1761)
++++++.|+ .||+|..+++++ +||+|++||++|++|+
T Consensus 491 ~~l~~~~l~-~~~~P~~i~~v~--~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 491 RFLRERGLA-EYKLPDRVEFID--SLPLTAVGKIDKKALR 527 (527)
T ss_pred HHHHhCCCc-cccCCCEEEEec--cCCCCCccceeHHhcC
Confidence 999975488 999999999999 9999999999999874
|
Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB. |
| >PRK12582 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-57 Score=596.53 Aligned_cols=504 Identities=16% Similarity=0.142 Sum_probs=375.1
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.++|+++++++||++|+++.+......+.+||+||.++++++|++|+ +.|+++||+|+++++|+ ++
T Consensus 48 ~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e 117 (624)
T PRK12582 48 PRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALL--------DLGLDPGRPVMILSGNS--IE 117 (624)
T ss_pred ccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEecCCC--HH
Confidence 568999999999999999999875421111268999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccc--cccCcccc--cccceeccCCCc-ceeEE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDAC--LKGLPKTA--AGEVVAFKGWPK-LTWFV 234 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~--~~~~~~~~--~~~~~~~~~~~~-~~~~~ 234 (1761)
|++++|||+++|+++||++|.++....+.+++.+++++++++++|+++.. ...+.... ...++....... .....
T Consensus 118 ~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 197 (624)
T PRK12582 118 HALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIA 197 (624)
T ss_pred HHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCccccccc
Confidence 99999999999999999999998633334589999999999999998641 11111100 001111111000 00000
Q ss_pred eccccCCCCCC---CCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCC---CCeEEEccCCcchh
Q psy14338 235 TEHLAKTPKDW---APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTE---GENMVCVLDFKRET 308 (1761)
Q Consensus 235 ~~~~~~~~~~~---~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~---~d~~l~~~~~~~~~ 308 (1761)
.+.+....... .......++++++|+|||||||.||||+++|+++++.+......++... +++++.++|++|.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~ 277 (624)
T PRK12582 198 FADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTM 277 (624)
T ss_pred HHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHH
Confidence 01111111000 0112346799999999999999999999999999988777666555554 58999999999999
Q ss_pred hhHHHHHHHHhcCcEEEEeCCccccCCH---HHHHHHHHhcCceEEEecCHHHHHHhhcCC----CCCCCCCCceeEEEe
Q psy14338 309 GLWHSVLTSVLNGMHAVYIPYALMKVNP---ASWMQMITKYRASVAVVKSRDLHWGLLATK----DHKDISLSSLRLLLV 381 (1761)
Q Consensus 309 ~~~~~i~~~L~~G~~lvi~~~~~~~~~~---~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~----~~~~~~l~~Lr~v~~ 381 (1761)
++...++.+|..|+++++.+. .+++ ..+++.++++++|+++.+|. ++..++... ......+++||.+++
T Consensus 278 g~~~~~~~~l~~G~tvvl~~~---~~~~~~~~~~~~~i~~~~~t~~~~vP~-~~~~l~~~~~~~~~~~~~~~~slr~i~~ 353 (624)
T PRK12582 278 GGNANFNGLLWGGGTLYIDDG---KPLPGMFEETIRNLREISPTVYGNVPA-GYAMLAEAMEKDDALRRSFFKNLRLMAY 353 (624)
T ss_pred hHHHHHHHHHhCceEEEEcCC---CcccchHHHHHHHHHhcCCeEEeccCH-HHHHHHHHHhhCHHHHHHHhhheeEEEe
Confidence 987657789999999999763 2333 45677788999999999974 666665421 111234689999999
Q ss_pred cCCCccCCHHHHHHHHHHhhh-CCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCc
Q psy14338 382 GDGANPWSLSSCDQFLSVFQS-KGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTS 460 (1761)
Q Consensus 382 gg~Ge~l~~~~~~~~~~~~~~-~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1761)
| |+++++++.++|.+.+.. .|.. ..++|+||+||++.+++..... .
T Consensus 354 g--Ga~l~~~~~~~~~~~~~~~~g~~-~~l~~~YG~TE~~~~~~~~~~~------------------------------~ 400 (624)
T PRK12582 354 G--GATLSDDLYERMQALAVRTTGHR-IPFYTGYGATETAPTTTGTHWD------------------------------T 400 (624)
T ss_pred c--CCCCCHHHHHHHHHHHHhhcCCC-ceEEeccccccccceeecccCC------------------------------C
Confidence 9 999999999999886421 0210 1389999999998655421100 1
Q ss_pred ccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecce
Q psy14338 461 LTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLL 540 (1761)
Q Consensus 461 ~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl 540 (1761)
.+.+++|+|++|++++|+ |.|++|||+|+|++++.||||+|+.|++.|. .+|||+|||+
T Consensus 401 ~~~~svG~p~pg~~v~i~---------~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~------------~dgw~~TGDl 459 (624)
T PRK12582 401 ERVGLIGLPLPGVELKLA---------PVGDKYEVRVKGPNVTPGYHKDPELTAAAFD------------EEGFYRLGDA 459 (624)
T ss_pred CCCCCCCcCCCCcEEEEc---------cCCCceEEEEECCcccccccCCccchhhhcC------------ccCCccccce
Confidence 235689999999999884 5688999999999999999999999999993 3799999999
Q ss_pred EEE-e---CCCeEEEEeccCCeEEE-CCcccChHHHH--HHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCC---
Q psy14338 541 GFL-G---PGGLVFVCGSRDGLMTV-TGRKHNADDII--ATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRP--- 610 (1761)
Q Consensus 541 ~~~-~---~dG~l~~~GR~d~qvki-~G~rIe~~eIE--~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~--- 610 (1761)
|++ | +||+|+|+||+||+||+ +|++|+|.||| ..+.+++.| .+|+|++.+ ++.+.++|++..
T Consensus 460 g~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V-----~~a~VvG~~---~~~~g~lv~p~~~~~ 531 (624)
T PRK12582 460 ARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVI-----HDAVVAGQD---RAFIGLLAWPNPAAC 531 (624)
T ss_pred EEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcch-----heEEEEcCC---CCcEEEEEecCHHHH
Confidence 999 4 56999999999999997 59999999885 556666666 799999973 445555554321
Q ss_pred -------C------CCHHHHHHHHHHHHHHhh--------hcceeeeeEEEEeCCCCcc------CCCCCcccHHHHHHH
Q psy14338 611 -------D------CSEEESFQWMSRVLQAVD--------SIHQVGLYCLALVPPNYLP------KTPLGGIHLSECKRR 663 (1761)
Q Consensus 611 -------~------~~~~~l~~~l~~~Lp~y~--------~P~~i~~~~v~~v~~~~lP------~t~~GKidR~~L~~~ 663 (1761)
+ .+.++++++++..|..|+ +|.++ +.++++| +|++||+.|+++.+.
T Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~t~~~~~~R~~~~~~ 604 (624)
T PRK12582 532 RQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRIARA-------LLMTEPPSIDAGEITDKGYINQRAVLER 604 (624)
T ss_pred HHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhheEEE-------EEeCCCCCccCCcCCccccccHHHHHHH
Confidence 1 245678899999999998 88875 3335555 566777888888777
Q ss_pred HHc
Q psy14338 664 FLE 666 (1761)
Q Consensus 664 ~~~ 666 (1761)
|.+
T Consensus 605 y~~ 607 (624)
T PRK12582 605 RAA 607 (624)
T ss_pred HHH
Confidence 753
|
|
| >PRK09192 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-56 Score=586.29 Aligned_cols=521 Identities=21% Similarity=0.347 Sum_probs=399.3
Q ss_pred ceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCC-ccCChHHHHHHHH
Q psy14338 1196 AQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQN-LQTTLPTVRMIVD 1274 (1761)
Q Consensus 1196 ~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~-~~~~~~rl~~il~ 1274 (1761)
.+.+||.||+.+++++|++|.+. |+++||+|+++++|++++++++|||+++|++++|+|+..+.. .....+++.++++
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~-gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLAL-GLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 37899999999999999999998 999999999999999999999999999999999998865432 1223569999999
Q ss_pred hcCCeEEEechhHHHHHhhhcc-ccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHH
Q psy14338 1275 VSKSVLVLSNQNVIKLLKSKEA-SNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAA 1353 (1761)
Q Consensus 1275 ~~~~~~vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~ 1353 (1761)
.++++++|++......+..... ........+..+..... .........+++++||+|||||||.||||+++|++
T Consensus 126 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~ 200 (579)
T PRK09192 126 SAQPAAIITPDELLPWVNEATHGNPLLHVLSHAWFKALPE-----ADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRA 200 (579)
T ss_pred hcCCCEEEeChHHHHHHHHhhccccccceeehhhhcccCC-----CccccCCCCCCCeEEEEecCCCCCCCceEEeeHHH
Confidence 9999999999877655443221 11111111111111110 00111234678999999999999999999999999
Q ss_pred HHHHHHHHHH-HcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHH
Q psy14338 1354 VTSLCRSMKL-ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGV 1432 (1761)
Q Consensus 1354 l~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~ 1432 (1761)
+...+..... .+++.++|+++.++|++|.+++...++.++..|+++++.+...+..+|..+++.+.++++|+++.+|.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~ 280 (579)
T PRK09192 201 LMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFG 280 (579)
T ss_pred HHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHH
Confidence 9998888877 889999999999999999999876677889999999887643333479999999999999988776666
Q ss_pred HHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCC
Q psy14338 1433 MELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEP 1512 (1761)
Q Consensus 1433 ~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~ 1512 (1761)
+.++..... .......+++++|.+++||+++++ .+.+.|.+.+...|.....+++.||+||++..+.........
T Consensus 281 ~~l~~~~~~----~~~~~~~~l~~lr~~~~gG~~l~~-~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~ 355 (579)
T PRK09192 281 YELCARRVN----SKDLAELDLSCWRVAGIGADMIRP-DVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGI 355 (579)
T ss_pred HHHHHHhhc----cccccccchhhhheeEecCccCCH-HHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCc
Confidence 666543211 111233568899999999999999 888888888876665445699999999987655433221111
Q ss_pred ceeEecccccccCcceecccCCC-CccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhh
Q psy14338 1513 SCVYVDLRALRNDRVSLVERGSP-HSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESE 1591 (1761)
Q Consensus 1513 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~ 1591 (1761)
.........+..+.+........ ......++|+|++|++++|+|++ ++.++.|+.|||+|+|+++++|||+ + +.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~~-~~~~~~g~~Gel~i~g~~~~~gY~~---~-~~ 430 (579)
T PRK09192 356 VVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRNEA-GMPLPERVVGHICVRGPSLMSGYFR---D-EE 430 (579)
T ss_pred eEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEECCC-CCCCCCCCEEEEEecCCchhhhhcC---C-cc
Confidence 11111111111111111000000 01123579999999999999965 7899999999999999999999998 7 56
Q ss_pred hHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHh
Q psy14338 1592 YAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRA 1671 (1761)
Q Consensus 1592 t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~ 1671 (1761)
+.+.| ..++||+|||+|++ +| |+ ++|+||+||+||++|+||+|.|||+ ++.+
T Consensus 431 ~~~~~--------~~dgw~~TGDlg~~-------~~--------G~----l~~~GR~dd~i~~~G~~v~p~eIE~-~l~~ 482 (579)
T PRK09192 431 SQDVL--------AADGWLDTGDLGYL-------LD--------GY----LYITGRAKDLIIINGRNIWPQDIEW-IAEQ 482 (579)
T ss_pred ccccc--------cCCceeeccceeeE-------EC--------CE----EEEEeccccEEEECCCccCHHHHHH-HHHh
Confidence 66666 35789999999988 46 88 9999999999999999999999999 8999
Q ss_pred ccCcc--eeEEEeeC----CeEEEEEEeCC-CchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHH
Q psy14338 1672 HKKIA--ECAVFTWT----NLLVVVVELDG-NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 1744 (1761)
Q Consensus 1672 ~p~V~--~a~Vv~~~----~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~ 1744 (1761)
||+|. +|+|++.. +.++++++... ...+.++|++++++. +.+.|++|..+++++.+.||+|++||++|++|+
T Consensus 483 ~p~V~~~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~ 561 (579)
T PRK09192 483 EPELRSGDAAAFSIAQENGEKIVLLVQCRISDEERRGQLIHALAAL-VRSEFGVEAAVELVPPHSLPRTSSGKLSRAKAK 561 (579)
T ss_pred cCCccCCcEEEEEeccCCCeeEEEEEEecCCChHHHHHHHHHHHHH-HHHHhCCCceEEEeCCCCcCCCCCcchhHHHHH
Confidence 99998 78888743 36777777532 345667899999987 544789999888886458999999999999999
Q ss_pred HHHHcCCCChhhhhcCC
Q psy14338 1745 DGFLADQLDPIYVAYNM 1761 (1761)
Q Consensus 1745 ~~~~~~~~~~~~~~~~~ 1761 (1761)
+.+..+..+++|.+.|+
T Consensus 562 ~~~~~~~~~~~~~~~~~ 578 (579)
T PRK09192 562 KRYLSGAFASLDVAASL 578 (579)
T ss_pred HHHHcCCCCcccccccc
Confidence 99999999999998875
|
|
| >PRK12583 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-57 Score=590.13 Aligned_cols=500 Identities=18% Similarity=0.246 Sum_probs=402.2
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
....++++.|...+. ++|+++|+++.+ .++.+||+||.++++++|++|.+. |+++|++|+++++|++++++
T Consensus 15 ~~~~~l~~~l~~~~~-----~~p~~~a~~~~~---~~~~~Ty~~l~~~~~~~a~~L~~~-gi~~g~~V~i~~~~~~~~~~ 85 (558)
T PRK12583 15 LLTQTIGDAFDATVA-----RFPDREALVVRH---QALRYTWRQLADAVDRLARGLLAL-GVQPGDRVGIWAPNCAEWLL 85 (558)
T ss_pred cccCcHHHHHHHHHH-----HCCCCeEEEecC---CCcEecHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCChHHHH
Confidence 334567777776665 679999998532 357899999999999999999998 99999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH-----HHHhhhccc-----------------
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI-----KLLKSKEAS----------------- 1297 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~-----~~~~~~~~~----------------- 1297 (1761)
++|||+++|++++|++|.++.+ ++.+++++++++++|++.... ..+......
T Consensus 86 ~~~a~~~~G~~~v~l~~~~~~~------~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (558)
T PRK12583 86 TQFATARIGAILVNINPAYRAS------ELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPEL 159 (558)
T ss_pred HHHHHHhhCCEEEecCCCCCHH------HHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcc
Confidence 9999999999999999987777 999999999999999976421 111110000
Q ss_pred -ccccc--------ccCCccccCCC-CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCc
Q psy14338 1298 -NVVDI--------KSWPTILDTDD-MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL 1367 (1761)
Q Consensus 1298 -~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~ 1367 (1761)
..+.. ..|........ ..............++++++++|||||||.||||+++|+++.+.+......+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~ 239 (558)
T PRK12583 160 RGVVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGL 239 (558)
T ss_pred eEEEEecCCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCC
Confidence 00000 00000000000 000000001123457889999999999999999999999999999988888999
Q ss_pred CCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchh
Q psy14338 1368 YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQL 1447 (1761)
Q Consensus 1368 ~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~ 1447 (1761)
.++|+++...+++|.++....++.++..|+++++... .+++..+++.++++++|+++++|+++..++...
T Consensus 240 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~------- 309 (558)
T PRK12583 240 TEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNE---AFDPLATLQAVEEERCTALYGVPTMFIAELDHP------- 309 (558)
T ss_pred CCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecC---CCCHHHHHHHHHHcCCeEEeccHHHHHHHHccc-------
Confidence 9999999999999999988888999999999887654 368999999999999999999999998876531
Q ss_pred hccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcc
Q psy14338 1448 KARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRV 1527 (1761)
Q Consensus 1448 ~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1527 (1761)
.....++++||.+++||+++++ .+.+++.+.+.. ..+.+.||+||++.++.......
T Consensus 310 ~~~~~~~~~lr~i~~~G~~~~~-~~~~~~~~~~~~-----~~i~~~YG~tE~~~~~~~~~~~~----------------- 366 (558)
T PRK12583 310 QRGNFDLSSLRTGIMAGAPCPI-EVMRRVMDEMHM-----AEVQIAYGMTETSPVSLQTTAAD----------------- 366 (558)
T ss_pred cccCCCchhheEEEecCCCCCH-HHHHHHHHHcCC-----cceeccccccccccceeccCccc-----------------
Confidence 1234568899999999999999 777777766532 46899999999876554322110
Q ss_pred eecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCC
Q psy14338 1528 SLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGE 1607 (1761)
Q Consensus 1528 ~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~ 1607 (1761)
....+..++|+|++++.++|+|++ +++++.|+.|||+|+|+.++.||+| +++.+.+.| ..+
T Consensus 367 -------~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~~gy~~---~~~~~~~~~--------~~~ 427 (558)
T PRK12583 367 -------DLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSVMKGYWN---NPEATAESI--------DED 427 (558)
T ss_pred -------ccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCccchhhcC---ChHHHHhhc--------CCC
Confidence 001123469999999999999987 8999999999999999999999999 999998887 357
Q ss_pred ceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee----
Q psy14338 1608 LYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW---- 1683 (1761)
Q Consensus 1608 ~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~---- 1683 (1761)
+||+|||+|++ ++| |+ +++.||+||+||++|.+|+|.|||+ ++..||+|.+|+|++.
T Consensus 428 ~~~~TGDl~~~------~~d--------g~----l~i~GR~~~~i~~~G~~v~~~~IE~-~l~~~~~v~~~~v~~~~~~~ 488 (558)
T PRK12583 428 GWMHTGDLATM------DEQ--------GY----VRIVGRSKDMIIRGGENIYPREIEE-FLFTHPAVADVQVFGVPDEK 488 (558)
T ss_pred CCeeccceEEE------CCC--------cc----EEEEecccceeEECCEEeCHHHHHH-HHHhCCCeeEEEEEeeecCC
Confidence 89999999999 999 99 9999999999999999999999999 8999999999999974
Q ss_pred -CCeEEEEEEeCC-CchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1684 -TNLLVVVVELDG-NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1684 -~~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
++.++++++... ...+..+++.+++++ |+ .|++|..+++++ +||+|++||++|++|+++..+
T Consensus 489 ~~~~~~~~v~~~~~~~~~~~~i~~~~~~~-L~-~~~~P~~i~~v~--~lP~t~sGK~~r~~L~~~~~~ 552 (558)
T PRK12583 489 YGEEIVAWVRLHPGHAASEEELREFCKAR-IA-HFKVPRYFRFVD--EFPMTVTGKVQKFRMREISIE 552 (558)
T ss_pred CCcEEEEEEEECCCCCCCHHHHHHHHHhh-cc-cCcCCcEEEEec--cCCCCCCCCccHHHHHHHHHh
Confidence 457788887643 345567899999987 88 899999999999 999999999999999998744
|
|
| >COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-57 Score=560.14 Aligned_cols=435 Identities=20% Similarity=0.259 Sum_probs=344.9
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++..++.+++..+|+.+|+......+. +.+||+|+.+++.++|+.|+ +.|+..||+|+|++.|+ ++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~ty~e~~~~v~~~a~gL~--------~lg~~~gdrvai~a~nr--~eW 83 (613)
T COG1022 16 HTLPKRLAERVKDRPDGVALMYKELGGW--EAITYRELYERVRALASGLL--------SLGIPAGDRVAIFAANR--PEW 83 (613)
T ss_pred ccHHHHHHHHhhcCCcceeEeeecCCcc--eEeeHHHHHHHHHHHHHHHH--------hcCCCCCCEEEEEeCCC--HHH
Confidence 5788899999999999999988763333 79999999999999999999 88997799999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccC-ccccccc--ceec-------cCCCc-
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGL-PKTAAGE--VVAF-------KGWPK- 229 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~-~~~~~~~--~~~~-------~~~~~- 229 (1761)
+++.+||+.+|++.||+.++.+++ .++++|+++++++|+++....... ....... +... .....
T Consensus 84 ~i~d~a~~~~g~v~Vp~y~t~~~~-----~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (613)
T COG1022 84 AIADLAILALGAVSVPIYSTSTPE-----QLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEA 158 (613)
T ss_pred HHHHHHHHHcCCeEEecCCCCCHH-----HHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccch
Confidence 999999999999999999999877 799999999999999998533211 1111100 0000 00000
Q ss_pred --ceeEEeccc------cCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcC-CCCCCeEEE
Q psy14338 230 --LTWFVTEHL------AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH-YTEGENMVC 300 (1761)
Q Consensus 230 --~~~~~~~~~------~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~ 300 (1761)
..+...... ..............+||+|.|||||||||+|||||+||+|+++.+......+. ++++|++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~Ls 238 (613)
T COG1022 159 KALVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLS 238 (613)
T ss_pred hhccccccccccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEE
Confidence 000000000 00000011123568999999999999999999999999999999999999997 999999999
Q ss_pred ccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhc--------CC------
Q psy14338 301 VLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLA--------TK------ 366 (1761)
Q Consensus 301 ~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~--------~~------ 366 (1761)
++|++|.+.........+..|++++. ..++..+.+.+.+.++|+++.||. ++..+-. ..
T Consensus 239 fLPlaHi~Er~~~~~~~~~~g~~~~~------~~~~~~~~~dl~~~rPt~m~~VPR-vwE~i~~~I~~kv~~~~~~~~~i 311 (613)
T COG1022 239 FLPLAHIFERAFEGGLALYGGVTVLF------KEDPRTLLEDLKEVRPTVMIGVPR-VWEKVYKGIMEKVAKAPAVRRKL 311 (613)
T ss_pred eCcHHHHHHHHHHHHHHhhcceEEEe------cCCHHHHHHHHHHhCCeEEeechH-HHHHHHHHHHHHHHhcchhHHHH
Confidence 99999999887434444444444444 348999999999999999999975 4322110 00
Q ss_pred ----------------------------------CCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcccc
Q psy14338 367 ----------------------------------DHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICP 412 (1761)
Q Consensus 367 ----------------------------------~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n 412 (1761)
+....--..+|++++| |++|++++...++.. |++ +++
T Consensus 312 f~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sG--Ga~l~~~~~~f~~~l----Gi~---i~e 382 (613)
T COG1022 312 FRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSG--GAPLSPELLHFFRSL----GIP---ILE 382 (613)
T ss_pred HHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEec--CCcCCHHHHHHHHHc----CCC---eEE
Confidence 0000111479999999 999999999888876 776 999
Q ss_pred ccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCc
Q psy14338 413 CASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492 (1761)
Q Consensus 413 ~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~ 492 (1761)
+||+|||+.+++.++.. ....+++|+|+|+++++|.| .
T Consensus 383 GYGlTEts~~~~v~~~~------------------------------~~~~gtvG~p~p~~evKI~d------------~ 420 (613)
T COG1022 383 GYGLTETSAVVSVNPPD------------------------------RFVLGTVGKPLPGIEVKIAD------------D 420 (613)
T ss_pred EecccccccceEEcccc------------------------------CcccCCcCCcCCCceEEEcc------------C
Confidence 99999999877766532 24578999999999999988 2
Q ss_pred eEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEEC-CcccChHHH
Q psy14338 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVT-GRKHNADDI 571 (1761)
Q Consensus 493 GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~-G~rIe~~eI 571 (1761)
|||+|+||+||+|||++|+.|+++| +++|||+|||+|.+|++|+|.++||+++.||.. |++|+|+.|
T Consensus 421 GEilVRG~~Vm~GYyk~pe~Taeaf------------~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~I 488 (613)
T COG1022 421 GEILVRGPNVMKGYYKNPEATAEAF------------TEDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPI 488 (613)
T ss_pred ceEEEecchhcchhcCChHHHhhhc------------cccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHH
Confidence 9999999999999999999999999 458999999999999999999999999999975 999999999
Q ss_pred HHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCC
Q psy14338 572 IATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRP 610 (1761)
Q Consensus 572 E~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~ 610 (1761)
|+.+.+++-| .+++|++. ....++|.+++..
T Consensus 489 E~~l~~~~~I-----~qi~vvg~---~k~~~~AlIvp~~ 519 (613)
T COG1022 489 ESKLAKSPLI-----EQICVVGD---DKKFLVALIVPDF 519 (613)
T ss_pred HHHHhcCCCe-----eEEEEEec---CCcceEEEEeCCH
Confidence 9988888777 78888883 5678999999864
|
|
| >PRK05850 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-56 Score=585.70 Aligned_cols=532 Identities=24% Similarity=0.364 Sum_probs=388.5
Q ss_pred CCCCCCCceEEccCC----CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeC
Q psy14338 1179 AGAPVPPGVSSVDTR----SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTI 1254 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~----~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpl 1254 (1761)
..+|+++|+++.+.. +..+++||+||.++++++|++|.+. | ++||+|+|+++|++++++++|||+++|++++|+
T Consensus 12 ~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~-g-~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 12 SLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRH-G-STGDRAVILAPQGLEYIVAFLGALQAGLIAVPL 89 (578)
T ss_pred hcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHh-C-CCCCEEEEEcCCcccHHHHHHHHHHcCceEEec
Confidence 367999999864321 1247899999999999999999998 8 689999999999999999999999999999999
Q ss_pred CCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc----ccccccCCccccCCCCccchhhhccCCCCCCC
Q psy14338 1255 RPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN----VVDIKSWPTILDTDDMPKKKLAALYRAPTAEM 1330 (1761)
Q Consensus 1255 dp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1330 (1761)
++.+| ..+.+++.++++++++++++++......+....... .......+ ...... .. ........+++
T Consensus 90 ~~~~~---~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~-~~~~~~~~~~d 161 (578)
T PRK05850 90 SVPQG---GAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVD-LLDLDS---PR-GSDARPRDLPS 161 (578)
T ss_pred CCCCc---cchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeec-cccccc---CC-ccccCCCCCCC
Confidence 97543 234459999999999999999987766554321100 00000000 000000 00 00112346789
Q ss_pred EEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc-C-----cCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCC
Q psy14338 1331 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC-E-----LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 1404 (1761)
Q Consensus 1331 ~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~-----~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~ 1404 (1761)
++||+|||||||.||||+++|+++.+.+......+ . ...+++++.++|++|.++++..++.+++.|+++++.++
T Consensus 162 ~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~ 241 (578)
T PRK05850 162 TAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSP 241 (578)
T ss_pred eEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCH
Confidence 99999999999999999999999998877655432 2 34567888899999999987789999999999999875
Q ss_pred CccccCHHHHHHHHHhcCceEeecchHH-HHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhC
Q psy14338 1405 SEVEVNPALWLSAVSQYRVRDTFCSYGV-MELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 1483 (1761)
Q Consensus 1405 ~~~~~~~~~l~~~i~~~~vt~~~~~Ps~-~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~ 1483 (1761)
..+..+|..+++.+++++++++ .+|++ +..+..... .......+++++|.+++||+++++ .+.++|.+.|..+
T Consensus 242 ~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~----~~~~~~~~~~~lr~~~~gg~~~~~-~~~~~~~~~~~~~ 315 (578)
T PRK05850 242 VAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTS----DDDMAGLDLGGVLGIISGSERVHP-ATLKRFADRFAPF 315 (578)
T ss_pred HHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcc----hhhhcCcchhhheeEEECcCCCCH-HHHHHHHHHHHhc
Confidence 3333489999999999999866 45554 444433110 111123467899999999999999 8889999999888
Q ss_pred CCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCC
Q psy14338 1484 GLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQC 1563 (1761)
Q Consensus 1484 g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~ 1563 (1761)
|.....+++.||+||++..+............+........+.......+ ......++|+|. +.+++|+|+++++++
T Consensus 316 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~g~~~~~~g~p~-~~~~~ivd~~~~~~~ 392 (578)
T PRK05850 316 NLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETG--GGTPLVSYGSPR-SPTVRIVDPDTCIEC 392 (578)
T ss_pred CcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCC--CCceEEeccCCC-CCEEEEEcCCCCcCC
Confidence 87777899999999987554432211111112221111111111000000 012344678876 789999998778999
Q ss_pred CCCcceEEEEcCCcccccccCCCCChhhhHHHhhh---hcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccc
Q psy14338 1564 GDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSA---RLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHD 1640 (1761)
Q Consensus 1564 p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~---~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~ 1640 (1761)
|.|+.|||+|+|++++.|||| +|+.|++.|.. +|+.+...++||+|||+|++ + | |+
T Consensus 393 ~~g~~Gel~v~g~~~~~gY~~---~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~------~-~--------G~--- 451 (578)
T PRK05850 393 PAGTVGEIWVHGDNVAAGYWQ---KPEETERTFGATLVDPSPGTPEGPWLRTGDLGFI------S-E--------GE--- 451 (578)
T ss_pred CCCCEEEEEEecCcccccccC---ChhhhHHHhhcccccccccCCCCCeeeccceeeE------E-C--------CE---
Confidence 999999999999999999999 99999999953 34333334689999999998 7 8 99
Q ss_pred eEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee----CCeEEEEEEeCCCc-hh------HhhHHHHHHH
Q psy14338 1641 AVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW----TNLLVVVVELDGNE-SE------ALDLVPLVTN 1709 (1761)
Q Consensus 1641 ~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~----~~~~~a~v~~~~~~-~~------~~~l~~~l~~ 1709 (1761)
++|+||+||+||++|+||+|.|||+ ++.+||.+. |+|++. ++.++++|+.+... .+ ..++++.+..
T Consensus 452 -l~~~GR~~d~i~~~G~~i~p~eIE~-~l~~~~~~~-~~v~~v~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~ 528 (578)
T PRK05850 452 -LFIVGRIKDLLIVDGRNHYPDDIEA-TIQEITGGR-VAAISVPDDGTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTS 528 (578)
T ss_pred -EEEEcccccEEEECCeecCHHHHHH-HHHHhcCCc-EEEEEecCCCceEEEEEEEeccccCcchhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999 899999865 666654 35788888764321 12 2345555554
Q ss_pred HHhh-hcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCCh
Q psy14338 1710 AVLE-EHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDP 1754 (1761)
Q Consensus 1710 ~~Lp-~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~~ 1754 (1761)
. ++ ..++.|..+++++.+.||+|++||++|++|++.+.++++..
T Consensus 529 ~-l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~~~~ 573 (578)
T PRK05850 529 A-ISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDEFTR 573 (578)
T ss_pred H-HHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCCccc
Confidence 3 33 13456777778865589999999999999999998876544
|
|
| >PRK07656 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-57 Score=585.36 Aligned_cols=484 Identities=19% Similarity=0.213 Sum_probs=399.8
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.|.+.+. .+|+++|+. ++++++||+||.+++.++|+.|.+. |+++||+|+++++|++++++++||
T Consensus 6 ~i~~~l~~~~~-----~~~~~~a~~-----~~~~~~Ty~~l~~~~~~~a~~L~~~-gv~~g~~V~l~~~~~~~~~~~~la 74 (513)
T PRK07656 6 TLPELLARAAR-----RFGDKEAYV-----FGDQRLTYAELNARVRRAAAALAAL-GIGKGDRVAIWAPNSPHWVIAALG 74 (513)
T ss_pred cHHHHHHHHHH-----HCCCCeEEE-----eCCCceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCChHHHHHHHH
Confidence 34445555443 679999999 6788999999999999999999998 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----c-cc--ccc----------cCC
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----N-VV--DIK----------SWP 1306 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~-~~--~~~----------~~~ 1306 (1761)
|+++|++++|++|.+|.+ ++..+++++++++++++............. . .+ ... .|.
T Consensus 75 ~~~~G~~~v~l~~~~~~~------~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (513)
T PRK07656 75 ALKAGAVVVPLNTRYTAD------EAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFT 148 (513)
T ss_pred HHhcCeEEEecCcccCHH------HHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHH
Confidence 999999999999988777 999999999999999988765443322110 0 00 000 000
Q ss_pred ccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHH
Q psy14338 1307 TILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFA 1386 (1761)
Q Consensus 1307 ~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 1386 (1761)
.+.... ..........++++++|+|||||||.||||.++|+++.+.+......+++.++++++..++++|.+++.
T Consensus 149 ~~~~~~-----~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (513)
T PRK07656 149 DFLAAG-----DPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYK 223 (513)
T ss_pred HHHhcC-----CCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHH
Confidence 000000 001122345778999999999999999999999999999999988999999999999999999998887
Q ss_pred HHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCC
Q psy14338 1387 LWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEE 1466 (1761)
Q Consensus 1387 ~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~ 1466 (1761)
..++.++..|+++++.+. +++..+++.|+++++|++.++|+++..+++.. ......+++||.+++||++
T Consensus 224 ~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------~~~~~~~~~l~~v~~~g~~ 292 (513)
T PRK07656 224 AGVNAPLMRGATILPLPV----FDPDEVFRLIETERITVLPGPPTMYNSLLQHP-------DRSAEDLSSLRLAVTGAAS 292 (513)
T ss_pred HHHHHHHHcCceEEecCc----CCHHHHHHHHHHhCCeEEechHHHHHHHHcCC-------CcCCCCccceeeEEecCCC
Confidence 778999999999998763 68999999999999999999999999997642 1234567899999999999
Q ss_pred CChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccc
Q psy14338 1467 RPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKL 1546 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 1546 (1761)
+++ .+.++|.+.++. ..+++.||+||++++......... ......++|+|
T Consensus 293 ~~~-~~~~~~~~~~~~-----~~~~~~YG~tE~~~~~~~~~~~~~------------------------~~~~~~~vG~~ 342 (513)
T PRK07656 293 MPV-ALLERFESELGV-----DIVLTGYGLSEASGVTTFNRLDDD------------------------RKTVAGTIGTA 342 (513)
T ss_pred CCH-HHHHHHHHHcCC-----CceEeEEccccCCCceeecCcccc------------------------ccccCCCcccc
Confidence 999 787888776641 369999999998665433221100 00012359999
Q ss_pred cCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCC
Q psy14338 1547 LPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGV 1626 (1761)
Q Consensus 1547 ~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~ 1626 (1761)
++|++++|+|++ ++++|.|..|||+|+|+.++.||++ +++.+...| .+++||+|||+|++ ++
T Consensus 343 ~~~~~~~i~d~~-~~~~~~g~~Gel~v~~~~~~~gy~~---~~~~~~~~~--------~~~~~~~tGDl~~~------~~ 404 (513)
T PRK07656 343 IAGVENKIVNEL-GEEVPVGEVGELLVRGPNVMKGYYD---DPEATAAAI--------DADGWLHTGDLGRL------DE 404 (513)
T ss_pred CCCcEEEEECCC-CCCCCCCCceEEEEEcchhhhhhcC---CHHHHhhhh--------ccCCceeccceEEE------cC
Confidence 999999999965 8999999999999999999999999 999998887 35789999999999 88
Q ss_pred CCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhH
Q psy14338 1627 AGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEA 1700 (1761)
Q Consensus 1627 d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~ 1700 (1761)
| |. ++++||.||+||++|.+|+|.|||+ ++.++++|.+++|++. ++.++++|+.+. ...+.
T Consensus 405 ~--------g~----~~~~GR~~d~i~~~G~~v~~~~iE~-~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~ 471 (513)
T PRK07656 405 E--------GY----LYIVDRKKDMFIVGGFNVYPAEVEE-VLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTE 471 (513)
T ss_pred C--------ee----EEEEecccceEEeCCEEeCHHHHHH-HHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCCH
Confidence 9 99 9999999999999999999999999 8999999999999974 456778887653 45667
Q ss_pred hhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1701 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1701 ~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
++++++++++ |+ .|++|..+++++ +||+|++||++|++|++
T Consensus 472 ~~l~~~~~~~-l~-~~~~p~~i~~v~--~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 472 EELIAYCREH-LA-KYKVPRSIEFLD--ELPKNATGKVLKRALRE 512 (513)
T ss_pred HHHHHHHHhh-cc-cccCCCEEEEec--CCCCCCccceeHHHHhc
Confidence 8999999987 88 899999999999 99999999999999975
|
|
| >PRK08180 feruloyl-CoA synthase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-57 Score=597.02 Aligned_cols=517 Identities=14% Similarity=0.134 Sum_probs=388.0
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++++.+.+++. ++|+++|+...+..++.+.+||+||.++++++|++|.+. |+++||+|+++++|++++++++
T Consensus 38 ~~~l~~~l~~~a~-----~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-Gv~~gd~Vai~~~n~~e~~~~~ 111 (614)
T PRK08180 38 PRRLTDRLVHWAQ-----EAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDR-GLSAERPLMILSGNSIEHALLA 111 (614)
T ss_pred CccHHHHHHHHHH-----HCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEecCCCHHHHHHH
Confidence 3456666665554 679999998543222347899999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechh--HHHHHhhhcc--cccccc---------ccCCcc
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQN--VIKLLKSKEA--SNVVDI---------KSWPTI 1308 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~--~~~~~~~~~~--~~~~~~---------~~~~~~ 1308 (1761)
|||+++|+++||++|.++.. ....+++.+++++++++++|++.. ....+..... ...+.. ..+..+
T Consensus 112 lA~~~~Gav~vpl~~~~~~~-~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 190 (614)
T PRK08180 112 LAAMYAGVPYAPVSPAYSLV-SQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAAL 190 (614)
T ss_pred HHHHHcCCeEeeeccccccc-cCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHH
Confidence 99999999999999987631 122459999999999999999753 2222221111 000100 001111
Q ss_pred ccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcC--CCCeEEEEeCCccChhHH
Q psy14338 1309 LDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELY--PSRHIALCLDPYCGLGFA 1386 (1761)
Q Consensus 1309 ~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 1386 (1761)
..... ............++++++|+|||||||.||||++||+++.+.+......+++. .+++++.++|++|.+++.
T Consensus 191 ~~~~~--~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~ 268 (614)
T PRK08180 191 LATPP--TAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGN 268 (614)
T ss_pred hcccc--ccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHH
Confidence 11000 00000111234678999999999999999999999999999988887777764 457888889999988887
Q ss_pred HHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCC
Q psy14338 1387 LWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEE 1466 (1761)
Q Consensus 1387 ~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~ 1466 (1761)
..++.+|++|+++++.+......++..+++.++++++|+++++|+++..|++.+.. .......++++||.+++||++
T Consensus 269 ~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~---~~~~~~~~~~~lr~v~~gGa~ 345 (614)
T PRK08180 269 HNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALER---DAALRRRFFSRLKLLFYAGAA 345 (614)
T ss_pred HHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHh---chhhhhhhccceeEEEEccCC
Confidence 77889999999999976311112345788899999999999999999999764321 011123457899999999999
Q ss_pred CChHHHHHHHHHHHhh-CCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccc
Q psy14338 1467 RPRIHLTSAFSKLFSA-LGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGK 1545 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~-~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 1545 (1761)
+++ ++.+++.+.+.. +|. ...+++.||+||++.+++..... ..+.+++|+
T Consensus 346 l~~-~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~---------------------------~~~~~svG~ 396 (614)
T PRK08180 346 LSQ-DVWDRLDRVAEATCGE-RIRMMTGLGMTETAPSATFTTGP---------------------------LSRAGNIGL 396 (614)
T ss_pred CCH-HHHHHHHHHHHhhcCC-CceeeeeecccccCCceEecccc---------------------------cCCCCcccC
Confidence 999 788888775432 232 24689999999986544321100 001245999
Q ss_pred ccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCC
Q psy14338 1546 LLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAG 1625 (1761)
Q Consensus 1546 p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d 1625 (1761)
|++|++++|+|++ ..|||+|+|++++.|||| +|+.|++.| +.+|||+|||+|++.. +.|
T Consensus 397 p~pg~~v~i~d~~--------~~GEi~vrg~~v~~GY~~---~p~~t~~~~--------~~dgw~~TGDlg~~~~--~~d 455 (614)
T PRK08180 397 PAPGCEVKLVPVG--------GKLEVRVKGPNVTPGYWR---APELTAEAF--------DEEGYYRSGDAVRFVD--PAD 455 (614)
T ss_pred ccCCcEEEEecCC--------CCcEEEEecCccchhhcC---ChhHhHhhc--------ccCCceeccceEEecC--CcC
Confidence 9999999999842 359999999999999999 999999998 4579999999999920 002
Q ss_pred CCCCCCCCCCCcccceEEEEcccCCeEEe-CCeecC--hHHHHHHHHHhccCcceeEEEeeCC-eEEEEEEeCCCc----
Q psy14338 1626 VAGAPVPPGVSKLHDAVFVVGALDETIML-RGMRYH--PIDIENSVMRAHKKIAECAVFTWTN-LLVVVVELDGNE---- 1697 (1761)
Q Consensus 1626 ~d~~~~~~g~G~~~~~l~~~GR~dd~Iki-~G~rI~--~~eIE~~~l~~~p~V~~a~Vv~~~~-~~~a~v~~~~~~---- 1697 (1761)
+| |+ |+|+||+||+||+ +|++|+ |.|||. ++..||.|.+|+|++.++ .+.++|++....
T Consensus 456 ~~--------g~----l~i~GR~~d~i~~~~G~~i~~~p~Eie~-~l~~~p~V~~a~V~g~~~~~~~a~V~~~~~~~~~~ 522 (614)
T PRK08180 456 PE--------RG----LMFDGRIAEDFKLSSGTWVSVGPLRARA-VSAGAPLVQDVVITGHDRDEIGLLVFPNLDACRRL 522 (614)
T ss_pred CC--------Cc----eEEecchhhhEEcCCCcEecchhhhHHH-HhhcCchhheEEEEcCCCCceEEEEEcCHHHHHHH
Confidence 46 88 9999999999985 698776 778899 888999999999999765 677787764221
Q ss_pred ------------hhHhhHHHHHHHHHhhhcCc--------eeeEEEEECCCCccCCC------chhhhHHHHHHHHHcCC
Q psy14338 1698 ------------SEALDLVPLVTNAVLEEHHL--------IVGVAVVVDPGVVPINS------RGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1698 ------------~~~~~l~~~l~~~~Lp~~~~--------vP~~i~~v~~~~lP~t~------~GKvdR~~L~~~~~~~~ 1751 (1761)
.+.++|++++++. |+ .|+ .|+.+++++ ++|+|+ +||+.|+++.+.| +.+
T Consensus 523 ~~~~~~~~~~~~~~~~~l~~~~~~~-l~-~~~~~~~~~~~~p~~~~~~~--~~p~~~~gk~t~~~~~~R~~~~~~y-~~~ 597 (614)
T PRK08180 523 AGLLADASLAEVLAHPAVRAAFRER-LA-RLNAQATGSSTRVARALLLD--EPPSLDAGEITDKGYINQRAVLARR-AAL 597 (614)
T ss_pred HhhcccCCHHHHhcCHHHHHHHHHH-HH-HHHhhccccHhheeEEEEec--CCCCCccCccCccccccHHHHHHHh-HHH
Confidence 2446788999886 66 666 899999999 898754 5688999999999 777
Q ss_pred CChhhhh
Q psy14338 1752 LDPIYVA 1758 (1761)
Q Consensus 1752 ~~~~~~~ 1758 (1761)
++++|..
T Consensus 598 i~~lY~~ 604 (614)
T PRK08180 598 VEALYAD 604 (614)
T ss_pred HHHHhCC
Confidence 8888864
|
|
| >PTZ00342 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-57 Score=593.49 Aligned_cols=513 Identities=12% Similarity=0.105 Sum_probs=381.8
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhh--cCCCCC-----------CEEE
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLER--AKINTG-----------DHVA 1228 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~--~Gv~~g-----------d~V~ 1228 (1761)
..++.+.|.+.+. ++|+++|+...+.....+.+||+||.++++++|+.|.+. .|+++| |+|+
T Consensus 60 ~~~l~~~l~~~~~-----~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~ 134 (746)
T PTZ00342 60 YKHIMKLLLEKYK-----LNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLG 134 (746)
T ss_pred cchHHHHHHHHHh-----hcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEE
Confidence 3466777777665 779999998432111247899999999999999999962 299999 9999
Q ss_pred EEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----cccccc
Q psy14338 1229 LIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIK 1303 (1761)
Q Consensus 1229 i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~ 1303 (1761)
|+++|+++|+++++||+++|++.||+++.++.+ ++.++++++++++++++.+..+.+...... .++...
T Consensus 135 i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~------el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~ 208 (746)
T PTZ00342 135 LYGSNSINWLVADLACMLSGVTTLVMHSKFSID------VIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILD 208 (746)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHH------HHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEEC
Confidence 999999999999999999999999998876666 999999999999999987766554432111 111111
Q ss_pred cCCcc----------------------------------------------------------ccCCC---Ccc---ch-
Q psy14338 1304 SWPTI----------------------------------------------------------LDTDD---MPK---KK- 1318 (1761)
Q Consensus 1304 ~~~~~----------------------------------------------------------~~~~~---~~~---~~- 1318 (1761)
..... ..... ... ..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 288 (746)
T PTZ00342 209 TLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDM 288 (746)
T ss_pred CCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHH
Confidence 10000 00000 000 00
Q ss_pred -----hhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc--CcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1319 -----LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC--ELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1319 -----~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
.........|+++|+|+|||||||.|||||+||+|+++.+....... ...+.++.+..+|++|.++.. ..+.
T Consensus 289 ~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~-~~~~ 367 (746)
T PTZ00342 289 TKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERV-IAYL 367 (746)
T ss_pred HhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHH-HHHH
Confidence 00011235689999999999999999999999999999887655432 223457889999999998884 4677
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcch-h--h--------------------
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQ-L--K-------------------- 1448 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~-~--~-------------------- 1448 (1761)
+++.|+++++.+. ++..+++.|+++++|+++++|.++..+.+.+.+.+.. . .
T Consensus 368 ~l~~G~~i~~~~~-----~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 442 (746)
T PTZ00342 368 SFMLGGTINIWSK-----DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFS 442 (746)
T ss_pred HHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcc
Confidence 8999999998863 7899999999999999999999999987532111000 0 0
Q ss_pred ------------ccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeE
Q psy14338 1449 ------------ARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVY 1516 (1761)
Q Consensus 1449 ------------~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~ 1516 (1761)
.+....++||.+++||+++++ ++.++|...++ ..+.+.||+||+++.++....
T Consensus 443 ~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~-~~~~~~~~~~g------~~i~~gYGlTEt~~~~~~~~~-------- 507 (746)
T PTZ00342 443 KFLEGITHISSKIKDKVNPNLEVILNGGGKLSP-KIAEELSVLLN------VNYYQGYGLTETTGPIFVQHA-------- 507 (746)
T ss_pred hHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCH-HHHHHHHHhcC------CCEEEeeccCcccceeeeccC--------
Confidence 000112689999999999999 88888877653 479999999998654322110
Q ss_pred ecccccccCcceecccCCCCccceecccccc-CCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHH
Q psy14338 1517 VDLRALRNDRVSLVERGSPHSLCLLESGKLL-PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQ 1595 (1761)
Q Consensus 1517 ~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~ 1595 (1761)
...+.+++|+|+ |+++++|+|.++....+.+..|||+|+||+++.|||+ +|++|+++
T Consensus 508 -------------------~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~---~pe~T~~~ 565 (746)
T PTZ00342 508 -------------------DDNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFL---EKEQTKNA 565 (746)
T ss_pred -------------------CCCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccC---Chhhhhhh
Confidence 011235699998 9999999985544555556679999999999999999 99999999
Q ss_pred hhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEe-CCeecChHHHHHHHHHhccC
Q psy14338 1596 FSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIML-RGMRYHPIDIENSVMRAHKK 1674 (1761)
Q Consensus 1596 F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki-~G~rI~~~eIE~~~l~~~p~ 1674 (1761)
| ..+|||+|||+|++ |+| |+ |+|+||+||+||+ +|++|+|.|||+ ++.+||.
T Consensus 566 f--------~~dGW~~TGDig~~------d~d--------G~----l~i~gR~kdlIkls~Ge~I~p~eIE~-~l~~~p~ 618 (746)
T PTZ00342 566 F--------TEDGYFKTGDIVQI------NKN--------GS----LTFLDRSKGLVKLSQGEYIETDMLNN-LYSQISF 618 (746)
T ss_pred c--------CcCCcccCCcEEEE------CCC--------Ce----EEEEccCCCeEEeCCCEEEchHHHHH-HHhcCCC
Confidence 9 45799999999999 999 99 9999999999995 799999999999 8999999
Q ss_pred cceeEEEeeC--CeEEEEEEeCCCc---------------h---hHh-----------hHHHHHH--------HHHhhhc
Q psy14338 1675 IAECAVFTWT--NLLVVVVELDGNE---------------S---EAL-----------DLVPLVT--------NAVLEEH 1715 (1761)
Q Consensus 1675 V~~a~Vv~~~--~~~~a~v~~~~~~---------------~---~~~-----------~l~~~l~--------~~~Lp~~ 1715 (1761)
|.+|+|++.+ +.++|+|+++... . +.. ++++++. +..|+ .
T Consensus 619 V~~~~VvG~~~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~ 697 (746)
T PTZ00342 619 INFCVVYGDDSMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLN-R 697 (746)
T ss_pred ccEEEEEccCCccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCc-c
Confidence 9999999965 3688888764210 0 000 1222222 22376 8
Q ss_pred CceeeEEEEECCCCc----cCCCchhhhHHHHHHHHHc--CCCChhhh
Q psy14338 1716 HLIVGVAVVVDPGVV----PINSRGEKQRMHLRDGFLA--DQLDPIYV 1757 (1761)
Q Consensus 1716 ~~vP~~i~~v~~~~l----P~t~~GKvdR~~L~~~~~~--~~~~~~~~ 1757 (1761)
|..++.|.++++ .| -+||+.|+.|+.+.+.|.. .+++++|.
T Consensus 698 ~e~i~~~~l~~~-~~t~~~~lTpt~KlkR~~v~~~y~~~i~~i~~~y~ 744 (746)
T PTZ00342 698 YNIINDIYLTSK-VWDTNNYLTPTFKVKRFYVFKDYAFFIDQVKKIYK 744 (746)
T ss_pred ceeeeeEEEecC-CCCCCCccChhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 888998888863 33 2899999999999998842 34555553
|
|
| >TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-57 Score=587.43 Aligned_cols=490 Identities=18% Similarity=0.242 Sum_probs=391.9
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccC-CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDT-RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~-~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
++.+.|...+. .+|+++|++..+. ...++.+||+||+++++++|++|++. |+++|++|+++++|++++++++|
T Consensus 23 ~~~~~~~~~~~-----~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~~~~~~~l 96 (538)
T TIGR03208 23 TINDHFDAAVA-----NCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARL-GVGRGDVVSFQLPNRWEFTALYL 96 (538)
T ss_pred cHHHHHHHHHH-----HCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHH
Confidence 45555655554 6799999986432 12457899999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH-----HHHhhhcc----c-cccccc-----cCCc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI-----KLLKSKEA----S-NVVDIK-----SWPT 1307 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~-----~~~~~~~~----~-~~~~~~-----~~~~ 1307 (1761)
||+++|++++|++|.+|.+ ++.+++++++++++++++... ........ . .++... .+..
T Consensus 97 a~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (538)
T TIGR03208 97 ACARIGAVLNPLMPIFRER------ELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDR 170 (538)
T ss_pred HHHhcCEEEeccCcccCHH------HHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHH
Confidence 9999999999999988877 999999999999999976531 11111100 0 000000 0111
Q ss_pred cccCCC---CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChh
Q psy14338 1308 ILDTDD---MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLG 1384 (1761)
Q Consensus 1308 ~~~~~~---~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 1384 (1761)
.+.... .+............++++|+++|||||||.||||+++|+++...+......+++..+|+++..+|++|..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 250 (538)
T TIGR03208 171 VLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTG 250 (538)
T ss_pred HhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHH
Confidence 110000 00000000112356789999999999999999999999999999999888899999999999999999888
Q ss_pred HHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeec
Q psy14338 1385 FALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVA 1464 (1761)
Q Consensus 1385 ~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gG 1464 (1761)
++..++.+++.|+++++.+ .+++..+++.++++++|++.++|+++..+..... ....+++++|.+++||
T Consensus 251 ~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~-------~~~~~~~~l~~~~~gG 319 (538)
T TIGR03208 251 FMYGLMMPLILNATAVLQD----IWNPARAAELIRETGVTFTMASTPFLTDLCRAVK-------ESGAPVPSLFTFLCAG 319 (538)
T ss_pred HHHHHHHHHHcCCEEEecC----ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchh-------ccCCCCCcceEEEEcC
Confidence 8778899999999999876 3799999999999999999999999998875321 1335678999999999
Q ss_pred CCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccc
Q psy14338 1465 EERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESG 1544 (1761)
Q Consensus 1465 e~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 1544 (1761)
+++++ .+.+++.+.++ ..+++.||+||++.++....... ......++|
T Consensus 320 ~~~~~-~~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~~~-------------------------~~~~~~~~G 367 (538)
T TIGR03208 320 APIPG-ILVERAWELLG------ALIVSAWGMTENGAVTVTEPDDA-------------------------LEKASTTDG 367 (538)
T ss_pred CCCCH-HHHHHHHHHcC------CeEEeeeccCcCCCccccCcccc-------------------------hhhccCccc
Confidence 99999 77777766653 57999999999865443211100 000123589
Q ss_pred cccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCC
Q psy14338 1545 KLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPA 1624 (1761)
Q Consensus 1545 ~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~ 1624 (1761)
+|++|++++|+|++ +++++.|+.|||+|+|++++.||++ +|+.|. + .++|||+|||+|++
T Consensus 368 ~~~~g~~v~i~~~~-~~~~~~g~~Gel~v~g~~~~~gy~~---~~~~~~--~--------~~~~~~~TGD~~~~------ 427 (538)
T TIGR03208 368 RPLPGVEVKVIDAN-GAKLSQGETGRLLVRGCSNFGGYLK---RPHLNS--T--------DAEGWFDTGDLAFQ------ 427 (538)
T ss_pred ccCCCCEEEEECCC-CCCCcCCCCcEEEEecCcccccccC---Cccccc--c--------cCCCceeccceEEE------
Confidence 99999999999965 8899999999999999999999999 888764 2 35789999999999
Q ss_pred CCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-Cch
Q psy14338 1625 GVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NES 1698 (1761)
Q Consensus 1625 d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~ 1698 (1761)
|+| |+ ++|+||+||+||++|++|+|.|||+ ++.+||+|.+++|++. ++.++++|+... ...
T Consensus 428 ~~~--------g~----l~~~gR~~~~i~~~G~~v~p~eIE~-~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 494 (538)
T TIGR03208 428 DAE--------GY----IRINGRSKDVIIRGGENIPVVEIEN-LLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCTL 494 (538)
T ss_pred CCC--------Cc----EEEEeccCceEEECCEEECHHHHHH-HHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCCC
Confidence 999 99 9999999999999999999999999 8999999999999974 356888888643 345
Q ss_pred hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHH
Q psy14338 1699 EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 1744 (1761)
Q Consensus 1699 ~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~ 1744 (1761)
+..++++++++..|+ .||+|..|++++ +||+|++||++|++|+
T Consensus 495 ~~~~l~~~~~~~~l~-~~~~P~~i~~v~--~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 495 DFAAMVAFLKAQKVA-LQYIPERLEVVD--ALPATPAGKIQKFRLR 537 (538)
T ss_pred CHHHHHHHHHhcchh-hccCCcEEEEec--cCCCCCccccchHhhc
Confidence 667899999863487 899999999999 9999999999999986
|
Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris. |
| >PLN02430 long-chain-fatty-acid-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-57 Score=595.78 Aligned_cols=507 Identities=15% Similarity=0.125 Sum_probs=376.7
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEEC---CCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCC
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLD---PNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNND 156 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d---~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~ 156 (1761)
..++.++|++.++++|+++|+.+.. +..++.+.+||+||.++++++|..|+ +.|+++||+|+|+++|+
T Consensus 41 ~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~--------~~Gv~~gd~V~i~~~n~- 111 (660)
T PLN02430 41 ITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALR--------ASGAEPGSRVGIYGSNC- 111 (660)
T ss_pred CCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC-
Confidence 3689999999999999999997642 11112246899999999999999999 88999999999999999
Q ss_pred chhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccc-ccCcc----cc-cccceeccCCCc-
Q psy14338 157 PINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACL-KGLPK----TA-AGEVVAFKGWPK- 229 (1761)
Q Consensus 157 ~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~-~~~~~----~~-~~~~~~~~~~~~- 229 (1761)
++|++++|||+++|+++||+++.++++ ++.+++++++++++++++... ..+.. .. ...++.++....
T Consensus 112 -~ew~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 185 (660)
T PLN02430 112 -PQWIVAMEACAAHSLICVPLYDTLGPG-----AVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEE 185 (660)
T ss_pred -HHHHHHHHHHHHcCCeEEEeccCCCHH-----HHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChH
Confidence 999999999999999999999999977 899999999999999986532 11110 00 011222211000
Q ss_pred ---------ceeEEecc-ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH-----cCCCC
Q psy14338 230 ---------LTWFVTEH-LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA-----CHYTE 294 (1761)
Q Consensus 230 ---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~-----~~~~~ 294 (1761)
......+. ...............|+|+|+|+|||||||+||||++||+|++..+...... .++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~ 265 (660)
T PLN02430 186 ESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTH 265 (660)
T ss_pred HhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCC
Confidence 00000111 1111000111223468999999999999999999999999999887765432 25778
Q ss_pred CCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCC--------
Q psy14338 295 GENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK-------- 366 (1761)
Q Consensus 295 ~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~-------- 366 (1761)
+|++++++|++|.++... .+.++..|+++++.+ .++..+.+.|.++++|++..+|. ++..+....
T Consensus 266 ~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~-----~~~~~l~~~l~~~~pt~~~~vP~-~~~~l~~~i~~~~~~~~ 338 (660)
T PLN02430 266 DDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYH-----GDLNALRDDLMELKPTLLAGVPR-VFERIHEGIQKALQELN 338 (660)
T ss_pred CCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeC-----CChhhHHHHHHHhCCcEEEecHH-HHHHHHHHHHHHHhccC
Confidence 999999999999999875 567789999998876 26788999999999999999974 665543210
Q ss_pred C-----------------------CCCC---C----------C-CceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCc
Q psy14338 367 D-----------------------HKDI---S----------L-SSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDA 409 (1761)
Q Consensus 367 ~-----------------------~~~~---~----------l-~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~ 409 (1761)
. .... + + ++||.+++| |+++++++.+ |.+.+. +. .
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~g--ga~l~~~~~~-~~~~~~--~~---~ 410 (660)
T PLN02430 339 PRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISG--GAPLSTEIEE-FLRVTS--CA---F 410 (660)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEEC--CCCCCHHHHH-HHHHhc--CC---C
Confidence 0 0000 0 1 589999999 9999999754 555542 12 3
Q ss_pred cccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeC-CCCcccCC
Q psy14338 410 ICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKM-DSPSYLCK 488 (1761)
Q Consensus 410 l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~-~~~~~~~p 488 (1761)
++++||+||++...+..... .....+++|+|+++++++|+|. +....+++
T Consensus 411 i~~~YG~TE~~~~~~~~~~~-----------------------------~~~~~gsvG~p~~~~evki~d~~~~g~~~~~ 461 (660)
T PLN02430 411 VVQGYGLTETLGPTTLGFPD-----------------------------EMCMLGTVGAPAVYNELRLEEVPEMGYDPLG 461 (660)
T ss_pred eeeecchhhhhhceEeeccc-----------------------------cCCCCCCccCCCCceEEEEEEcCCcCcccCC
Confidence 99999999997654432210 0123578999999999999873 22112466
Q ss_pred CCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE-CCcccC
Q psy14338 489 TDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV-TGRKHN 567 (1761)
Q Consensus 489 ~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki-~G~rIe 567 (1761)
.|..|||+|+|++++.|||++|+.|+++|. +|||+|||+|++|+||+|+|+||+||+||+ +|++|+
T Consensus 462 ~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~-------------dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~ 528 (660)
T PLN02430 462 EPPRGEICVRGKCLFSGYYKNPELTEEVMK-------------DGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVA 528 (660)
T ss_pred CCCcceEEecCCCccccccCChHHhhhhhh-------------ccceeccceEEECCCCcEEEEEcccccEEcCCCcEEc
Confidence 677899999999999999999999999983 789999999999999999999999999997 599999
Q ss_pred hHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCC------------------CHHHHHHHH----H---
Q psy14338 568 ADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC------------------SEEESFQWM----S--- 622 (1761)
Q Consensus 568 ~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~------------------~~~~l~~~l----~--- 622 (1761)
|.|||+.+.+++.| .+|+|++. ..++.++|+|++..+. ..+++++.+ +
T Consensus 529 p~~IE~~l~~~p~V-----~~~~V~G~--~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~ 601 (660)
T PLN02430 529 LEYLENVYGQNPIV-----EDIWVYGD--SFKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTA 601 (660)
T ss_pred hHHHHHHHhcCCCe-----eEEEEEec--CCcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHH
Confidence 99999999888877 78988883 3467899999876421 112233222 2
Q ss_pred --HHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 623 --RVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 623 --~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+.|+.|.+++.+.+..-.| .++.-.+|+++|+.|+.+.+.|..
T Consensus 602 ~~~~l~~~e~i~~~~l~~~~~-~~~~g~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02430 602 EKNKLRGFEYIKGVILETKPF-DVERDLVTATLKKRRNNLLKYYQV 646 (660)
T ss_pred HHhCCCCceeeeEEEEECCCC-CCcCCcCChhhhhhhHHHHHHHHH
Confidence 2377888888763322222 134456999999999999988754
|
|
| >PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-57 Score=569.01 Aligned_cols=426 Identities=17% Similarity=0.192 Sum_probs=350.0
Q ss_pred EEeHHHHHHHHHHHHHHhhcCCCCccccCCC-CCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhH
Q psy14338 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSL-KSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQ 190 (1761)
Q Consensus 112 ~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv-~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~r 190 (1761)
-+.|+||+++++++|+.|+ +.|+ ++|++|+++++|+ +++++++|||+++|+++||+||.++.+ +
T Consensus 19 ~~~~~el~~~~~~~a~~L~--------~~g~~~~~~~V~i~~~n~--~e~~~~~~A~~~~G~~~vpl~~~~~~~-----~ 83 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQ--------QLATPRTPPKILLAESDP--LQFLAAFLAAVAAGCPVFLANPHWGQQ-----E 83 (452)
T ss_pred ecChHHHHHHHHHHHHHHH--------HhcCCCCCCeEEEecCCC--HHHHHHHHHHHHhCcEEEeeccCCCHH-----H
Confidence 4789999999999999999 8888 5799999999999 999999999999999999999999976 8
Q ss_pred HHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCce
Q psy14338 191 IGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVM 270 (1761)
Q Consensus 191 l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PK 270 (1761)
+.++++++++++++++....... .. . .. . ......++++++++|||||||.||
T Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~~----------~~----------~-~~--~----~~~~~~~~~~~~i~~TSGTTG~PK 136 (452)
T PRK07445 84 WQQVLNLVQPDQIWGLDQLKLSH----------PP----------P-LP--S----QGILPNLETGWIMIPTGGSSGQIR 136 (452)
T ss_pred HHHHHHhcCCCEEEecCcccccc----------CC----------C-CC--c----cccCCCCCCcEEEEeCCCCCCCCc
Confidence 99999999999999876532110 00 0 00 0 011235789999999999999999
Q ss_pred EEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceE
Q psy14338 271 GVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASV 350 (1761)
Q Consensus 271 gV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~ 350 (1761)
||++||+++.+.+.+....+++.+ ++++.++|++|.+|+.. ++.+|+.|+++++.+.. +.........++++|+
T Consensus 137 gV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~-~~~~l~~G~t~v~~~~~----~~~~~~~~~~~~~~t~ 210 (452)
T PRK07445 137 FAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQ-FMRSFLTGGKLVILPYK----RLKSGQELPPNPSDFF 210 (452)
T ss_pred EEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHH-HHHHHHcCCeEEEcChH----hccchhhhhhhcCceE
Confidence 999999999998888887777765 46888999999999984 89999999999998732 1222233445788999
Q ss_pred EEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCC
Q psy14338 351 AVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRA 430 (1761)
Q Consensus 351 ~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~ 430 (1761)
+.++| +++..++... ...+++||.+++| |+++++++.+++... |++ ++|.||+||++..++.....
T Consensus 211 ~~~vP-~~l~~l~~~~---~~~l~~l~~i~~g--G~~l~~~~~~~~~~~----~~~---l~~~YG~TE~~~~~~~~~~~- 276 (452)
T PRK07445 211 LSLVP-TQLQRLLQLR---PQWLAQFRTILLG--GAPAWPSLLEQARQL----QLR---LAPTYGMTETASQIATLKPD- 276 (452)
T ss_pred EEehH-HHHHHHHhhC---hhhhhcceEEEEC--CccCCHHHHHHHHhc----CCe---EecCcchhhhcccccccCch-
Confidence 99986 4777776522 2357899999999 999999999888653 443 99999999987543321100
Q ss_pred CcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCC
Q psy14338 431 GVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLP 510 (1761)
Q Consensus 431 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p 510 (1761)
+ ......++|+|+++++++|+ .|+.|||+|+|+++++||++++
T Consensus 277 -------------------------~--~~~~~~~~G~~~p~~~v~i~----------~g~~Gel~v~g~~~~~gY~~~~ 319 (452)
T PRK07445 277 -------------------------D--FLAGNNSSGQVLPHAQITIP----------ANQTGNITIQAQSLALGYYPQI 319 (452)
T ss_pred -------------------------h--hccCCCcCCccCCCCeEEEc----------CCCcceEEEeCCccchhhcCCc
Confidence 0 01124579999999999997 3678999999999999999853
Q ss_pred ccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEE
Q psy14338 511 GLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIA 590 (1761)
Q Consensus 511 ~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~ 590 (1761)
. ..++||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|.+++.| .+|+
T Consensus 320 ~------------------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V-----~~a~ 376 (452)
T PRK07445 320 L------------------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLV-----QDVC 376 (452)
T ss_pred c------------------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCc-----ceEE
Confidence 2 1268999999999999999999999999999999999999999999998888 7999
Q ss_pred EEEEecC-CCceEEEEEEeCCC-CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 591 VFSIRVL-RDERICVIAEQRPD-CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 591 v~~~~~~-~~~~l~a~v~~~~~-~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
|++.++. .++.++|+++...+ .+.++++++++++|+.|++|..+ +.+++||+|++||++|++|++.+.+
T Consensus 377 V~g~~~~~~g~~~~a~vv~~~~~~~~~~l~~~~~~~L~~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 447 (452)
T PRK07445 377 VLGLPDPHWGEVVTAIYVPKDPSISLEELKTAIKDQLSPFKQPKHW-------IPVPQLPRNPQGKINRQQLQQIAVQ 447 (452)
T ss_pred EEeccCcCCCcEEEEEEEeCCCCCCHHHHHHHHHHhCCcccCCeEE-------EEecCCCCCCCcccCHHHHHHHHHH
Confidence 9999854 57889999887654 56789999999999999999986 5569999999999999999998754
|
|
| >PRK07867 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-56 Score=578.63 Aligned_cols=470 Identities=17% Similarity=0.205 Sum_probs=382.8
Q ss_pred CCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCC
Q psy14338 1182 PVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQN 1261 (1761)
Q Consensus 1182 P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~ 1261 (1761)
|+++|++ .+++.+||+||.++++++|++|+++.|++++++|+++++|+++++++++||+++|++++||+|.+|.+
T Consensus 17 ~~~~a~~-----~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 91 (529)
T PRK07867 17 DDDRGLY-----FEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPTRRGA 91 (529)
T ss_pred cCCceEE-----ECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCCCChH
Confidence 7899998 56689999999999999999999864789999999999999999999999999999999999988887
Q ss_pred ccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc-ccccccc--cCCccccCCCCccchhhhccCCCCCCCEEEEEecc
Q psy14338 1262 LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA-SNVVDIK--SWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSV 1338 (1761)
Q Consensus 1262 ~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 1338 (1761)
++.+++++++++++|++......+..... ...+... .+.+.+..... .........++++++|+|||
T Consensus 92 ------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~i~~TS 161 (529)
T PRK07867 92 ------ALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDSPAWADELAAHRD----AEPPFRVADPDDLFMLIFTS 161 (529)
T ss_pred ------HHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEeccccHHHHhcccCC----CCCCcccCCccceEEEEECC
Confidence 99999999999999999887665544321 1111110 01111110000 01112235678999999999
Q ss_pred CCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHH
Q psy14338 1339 STTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418 (1761)
Q Consensus 1339 GSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i 1418 (1761)
||||.||||+++|+++..........+++.++|+++..+|++|..++...++.++..|+++++.+. +++..+++.+
T Consensus 162 GTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i 237 (529)
T PRK07867 162 GTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRK----FSASGFLPDV 237 (529)
T ss_pred CCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCC----CCHHHHHHHH
Confidence 999999999999999999999889999999999999999999988886667788999999998764 6899999999
Q ss_pred HhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccc
Q psy14338 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498 (1761)
Q Consensus 1419 ~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE 1498 (1761)
+++++|++.++|+.+..++.... ......+++|. ++||+.+++ .+ .+|.+.+ | ..+++.||+||
T Consensus 238 ~~~~vt~~~~~p~~~~~ll~~~~-------~~~~~~~~lr~-~~gg~~~~~-~~-~~~~~~~---g---~~l~~~YG~TE 301 (529)
T PRK07867 238 RRYGATYANYVGKPLSYVLATPE-------RPDDADNPLRI-VYGNEGAPG-DI-ARFARRF---G---CVVVDGFGSTE 301 (529)
T ss_pred HHhCCeEEeccHHHHHHHHhCCC-------cccccccceEE-EecCCCChH-HH-HHHHHHh---C---CcEEEeecccc
Confidence 99999999999999998875311 11122357884 568888876 44 5555554 3 57999999999
Q ss_pred cceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCc-----------
Q psy14338 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSH----------- 1567 (1761)
Q Consensus 1499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~----------- 1567 (1761)
++.+...... ....++|+|+++ ++|+|++++++++.|+
T Consensus 302 ~~~~~~~~~~-----------------------------~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~ 350 (529)
T PRK07867 302 GGVAITRTPD-----------------------------TPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADE 350 (529)
T ss_pred cccccccCCC-----------------------------CCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCC
Confidence 7653321100 011348999999 7888877788999999
Q ss_pred -ceEEEE-cCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEE
Q psy14338 1568 -LGEIWV-QSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVV 1645 (1761)
Q Consensus 1568 -~GEL~i-~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~ 1645 (1761)
+|||++ +|++++.||+| +|+.|.+.| .+|||+|||+|++ ++| |+ ++|+
T Consensus 351 ~~Gel~i~~g~~~~~gy~~---~~~~~~~~~---------~~g~~~TGD~~~~------~~~--------g~----l~~~ 400 (529)
T PRK07867 351 AIGELVNTAGPGGFEGYYN---DPEADAERM---------RGGVYWSGDLAYR------DAD--------GY----AYFA 400 (529)
T ss_pred cceEEEEecCCcccccccC---ChHhhhhhh---------cCCeEeeccEEEE------eCC--------Cc----EEEe
Confidence 999999 99999999999 999999988 3689999999999 899 99 9999
Q ss_pred cccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHH-HhhhcCce
Q psy14338 1646 GALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNA-VLEEHHLI 1718 (1761)
Q Consensus 1646 GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~-~Lp~~~~v 1718 (1761)
||+||+||++|+||+|.|||+ ++.+||+|.+|+|++. +++++++++.. +...+.++++++|+++ .|+ .||+
T Consensus 401 GR~~d~i~~~G~~v~p~eIE~-~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~~~l~-~~~~ 478 (529)
T PRK07867 401 GRLGDWMRVDGENLGTAPIER-ILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFDPDAFAEFLAAQPDLG-PKQW 478 (529)
T ss_pred ccccCeEEECCEEeCHHHHHH-HHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCCHHHHHHHHHhhccCC-cccC
Confidence 999999999999999999999 8999999999999975 44777777764 3456778899999763 377 8999
Q ss_pred eeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1719 VGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1719 P~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
|..|++++ +||+|++||++|++|+++.....
T Consensus 479 P~~i~~~~--~iP~t~~GKv~r~~L~~~~~~~~ 509 (529)
T PRK07867 479 PSYVRVCA--ELPRTATFKVLKRQLSAEGVDCA 509 (529)
T ss_pred CeEEEEee--ccCCCCCcceeHHHHHHhcCCCC
Confidence 99999999 99999999999999999875443
|
|
| >PRK07470 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-56 Score=581.22 Aligned_cols=486 Identities=16% Similarity=0.195 Sum_probs=387.3
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
.++|+++|+. .+++++||+||.++++++|+.|.+. |+++|++|+++++|+++++++++||+++|++++|++|..
T Consensus 18 ~~~p~~~a~~-----~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 91 (528)
T PRK07470 18 RRFPDRIALV-----WGDRSWTWREIDARVDALAAALAAR-GVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTNFRQ 91 (528)
T ss_pred HHCCCceEEE-----ECCccccHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecCccC
Confidence 3679999999 5678999999999999999999999 999999999999999999999999999999999999988
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----cccccc------cCCccccCCCCccchhhhccCCCC
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIK------SWPTILDTDDMPKKKLAALYRAPT 1327 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 1327 (1761)
|.+ ++.++++++++++++++....+........ ..+... .+..+..... ..........
T Consensus 92 ~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 161 (528)
T PRK07470 92 TPD------EVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHL----GARVANAAVD 161 (528)
T ss_pred CHH------HHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCC----CCCCCcccCC
Confidence 877 999999999999999998765444322110 001100 0000100000 0001122356
Q ss_pred CCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc--CcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCC
Q psy14338 1328 AEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC--ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 1405 (1761)
Q Consensus 1328 ~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~ 1405 (1761)
++++++|+|||||||.||||+++|+++...+......+ ++.+.|+++.+.|++|.+++. . +..++.|+++++.+..
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~-~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-Q-LCQVARGAATVLLPSE 239 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-H-HHHHhcCceEEEeccc
Confidence 78999999999999999999999999976655433322 567778888889988887763 3 4467888888887643
Q ss_pred ccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCC
Q psy14338 1406 EVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGL 1485 (1761)
Q Consensus 1406 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~ 1485 (1761)
.++++.+++.|+++++|++.++|++++.+.+.. .....+++++|.+++||+++++ .+.+++.+.++
T Consensus 240 --~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~lr~~~~gG~~l~~-~~~~~~~~~~g---- 305 (528)
T PRK07470 240 --RFDPAEVWALVERHRVTNLFTVPTILKMLVEHP-------AVDRYDHSSLRYVIYAGAPMYR-ADQKRALAKLG---- 305 (528)
T ss_pred --CcCHHHHHHHHHhcCCeEEechHHHHHHHHhCc-------CcCCCCCcceEEEEEcCCCCCH-HHHHHHHHHhC----
Confidence 468999999999999999999999999987631 2234568899999999999998 66666666553
Q ss_pred CCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCC
Q psy14338 1486 SPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGD 1565 (1761)
Q Consensus 1486 ~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~ 1565 (1761)
..+++.||+||++..+....... ... ........+++|+|++|++++|+|++ +++++.
T Consensus 306 --~~~~~~YG~TE~~~~~~~~~~~~---------~~~----------~~~~~~~~~~~G~~~~g~~~~i~d~~-~~~~~~ 363 (528)
T PRK07470 306 --KVLVQYFGLGEVTGNITVLPPAL---------HDA----------EDGPDARIGTCGFERTGMEVQIQDDE-GRELPP 363 (528)
T ss_pred --cHHHHhCCCcccCCceeecchhh---------ccc----------cccccceeeccCcccCCcEEEEECCC-CCCCCC
Confidence 46899999999765432211000 000 00011234569999999999999965 889999
Q ss_pred CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEE
Q psy14338 1566 SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVV 1645 (1761)
Q Consensus 1566 G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~ 1645 (1761)
|+.|||+|+|+.++.||++ +|+.+++.| .++||+|||+|++ ++| |+ ++++
T Consensus 364 g~~Gel~i~~~~~~~gy~~---~~~~~~~~~---------~~~~~~TGDl~~~------~~~--------g~----l~~~ 413 (528)
T PRK07470 364 GETGEICVIGPAVFAGYYN---NPEANAKAF---------RDGWFRTGDLGHL------DAR--------GF----LYIT 413 (528)
T ss_pred CCceEEEEeCCccchhhcC---CHHHHHhhh---------cCCcEecceeEEE------ccC--------Ce----EEEe
Confidence 9999999999999999999 999999888 3689999999999 899 99 9999
Q ss_pred cccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHHHHHHhhhcCcee
Q psy14338 1646 GALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLVTNAVLEEHHLIV 1719 (1761)
Q Consensus 1646 GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~~vP 1719 (1761)
||+||+||++|+||+|.|||. ++.++|.|.+|+|++. ++.++++++... ...+.++++++|++. |+ .|++|
T Consensus 414 GR~dd~i~~~G~~v~~~~IE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~-~~~~P 490 (528)
T PRK07470 414 GRASDMYISGGSNVYPREIEE-KLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPVDEAELLAWLDGK-VA-RYKLP 490 (528)
T ss_pred CCccceEEeCCEEECHHHHHH-HHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCCCHHHHHHHHHHh-hh-cCCCC
Confidence 999999999999999999999 8899999999999975 345677776543 336778999999997 88 99999
Q ss_pred eEEEEECCCCccCCCchhhhHHHHHHHHHcCCCC
Q psy14338 1720 GVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 1753 (1761)
Q Consensus 1720 ~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~ 1753 (1761)
..+++++ +||+|++||++|+.|++++.+..+-
T Consensus 491 ~~~~~~~--~iP~t~~GKi~r~~l~~~~~~~~~~ 522 (528)
T PRK07470 491 KRFFFWD--ALPKSGYGKITKKMVREELEERGLL 522 (528)
T ss_pred cEEEEec--cCCCCCcccccHHHHHHHHHhcccc
Confidence 9999999 9999999999999999998776553
|
|
| >PLN03051 acyl-activating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=576.62 Aligned_cols=449 Identities=14% Similarity=0.136 Sum_probs=334.7
Q ss_pred ccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccc------ccCccccc---ccce
Q psy14338 152 YPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACL------KGLPKTAA---GEVV 222 (1761)
Q Consensus 152 ~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~------~~~~~~~~---~~~~ 222 (1761)
++|+ +++++++|||+++|+++||+++.++.+ ++.+++++++++++|+++... +.+..... ...+
T Consensus 1 ~~n~--~e~~~~~lA~~~~Gav~vpl~~~~~~~-----el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i 73 (499)
T PLN03051 1 MPMT--VDAVIIYLAIVLAGCVVVSVADSFSAK-----EIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAI 73 (499)
T ss_pred CCCc--HHHHHHHHHHHHcCCEEEeeCCCCCHH-----HHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEE
Confidence 5899 999999999999999999999999977 899999999999999986421 11111100 0011
Q ss_pred ecc--CCCc-----ceeE-Eecccc--CCC----CCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH
Q psy14338 223 AFK--GWPK-----LTWF-VTEHLA--KTP----KDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ 288 (1761)
Q Consensus 223 ~~~--~~~~-----~~~~-~~~~~~--~~~----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~ 288 (1761)
... .... .... ..+... ... ..........++|+++|+|||||||+||||+++|++++..+.....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~ 153 (499)
T PLN03051 74 VLPAAGEPVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWA 153 (499)
T ss_pred EEeccCcccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHH
Confidence 110 0000 0000 001000 000 0000111235689999999999999999999999998877666666
Q ss_pred HcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC-
Q psy14338 289 ACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD- 367 (1761)
Q Consensus 289 ~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~- 367 (1761)
.++++++|++++.+|++|+.+++ .++.+|+.|+++++.+. .+++..+++.|+++++|++..+|+ ++..|+....
T Consensus 154 ~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~---~~~~~~~~~~i~~~~vt~~~~vP~-~~~~l~~~~~~ 228 (499)
T PLN03051 154 HMDIQPGDVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGG---APLGRGFGKFVQDAGVTVLGLVPS-IVKAWRHTGAF 228 (499)
T ss_pred hcCCCCCCEEEEccCcceeeehH-HHHHHHHcCCEEEecCC---CCCcHHHHHHHHHhCCcEEEeCHH-HHHHHHhcCcc
Confidence 78899999999999999999987 48999999999999873 467899999999999999999964 7777766442
Q ss_pred -CCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcc
Q psy14338 368 -HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLS 446 (1761)
Q Consensus 368 -~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 446 (1761)
....++++||.+++| |++++++..++|.+..+ .|. .++|.||+||++...+.....
T Consensus 229 ~~~~~~~~~Lr~i~~g--G~~~~~~~~~~~~~~~~-~~~---~~~~~YG~TE~~~~~~~~~~~----------------- 285 (499)
T PLN03051 229 AMEGLDWSKLRVFAST--GEASAVDDVLWLSSVRG-YYK---PVIEYCGGTELASGYISSTLL----------------- 285 (499)
T ss_pred ccccCCchhheEEEec--CCCCCHHHHHHHHHhcc-ccc---eeEeeeccccccceeeccccc-----------------
Confidence 334578899999999 99999999886666321 023 389999999986433211100
Q ss_pred cceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCC--CceEEEEecCCc--cccccCCCcccccccccccc
Q psy14338 447 YGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTD--EVGEICVASTGT--GSQYWGLPGLSNTTFKVTPL 522 (1761)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G--~~GEL~i~G~~l--~~GY~~~p~~T~~~f~~~p~ 522 (1761)
.....+++|+|++|++++|+|++++ ++|.| ++|||+|+||.+ +.||||++ .++..|..+|+
T Consensus 286 ------------~~~~~~~~G~p~~~~~~~ivd~~g~--~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~~~~~~g~~~ 350 (499)
T PLN03051 286 ------------QPQAPGAFSTASLGTRFVLLNDNGV--PYPDDQPCVGEVALAPPMLGASDRLLNAD-HDKVYYKGMPM 350 (499)
T ss_pred ------------CCCCCccccCCCCCceEEEECCCCC--CCCCCCCcceEEEEecCcCCCCccccCCc-ccceeeecCCc
Confidence 0113468999999999999999987 48888 589999999977 58999865 34432322333
Q ss_pred ccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHh-cCCccccccceEEEEEEecC-CC-
Q psy14338 523 LADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLA-VEPMKFIYRGRIAVFSIRVL-RD- 599 (1761)
Q Consensus 523 ~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~-~~~v~~~~~~~a~v~~~~~~-~~- 599 (1761)
... ++.+||||||+|++|+||+|+|+||+|||||++|+||+|.|||++|.+ ++.| .+|+|+++++. .+
T Consensus 351 ~~~----~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V-----~~aavvg~~d~~~g~ 421 (499)
T PLN03051 351 YGS----KGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACDRAVAGI-----AETAAVGVAPPDGGP 421 (499)
T ss_pred ccc----CCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHHhcCCCc-----ceEEEEEecCCCCCc
Confidence 211 236799999999999999999999999999999999999999999986 6777 79999999864 55
Q ss_pred ceEEEEE---EeCCC---CCHHHHHHHHHHH----HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 600 ERICVIA---EQRPD---CSEEESFQWMSRV----LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 600 ~~l~a~v---~~~~~---~~~~~l~~~l~~~----Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+.++||+ +.+++ .+.++++++|++. |+.|+.|..+ +.+++||+|+||||||++|++.+..
T Consensus 422 ~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 491 (499)
T PLN03051 422 ELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRV-------KIVPELPRNASNKLLRRVLRDQLKK 491 (499)
T ss_pred eEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceE-------EEcCCCCCCCCccHHHHHHHHHHHH
Confidence 5788888 65543 4567787777554 5566666554 3359999999999999999987643
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-56 Score=638.94 Aligned_cols=503 Identities=17% Similarity=0.182 Sum_probs=404.1
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++.+.|.+.+. ++|+++|++. ..++++||+||.++++++|+.|.+ ++++||+|+++++|++++++++|
T Consensus 615 ~~l~~~~~~~a~-----~~p~~~a~~~----~~~~~~Ty~el~~~~~~~a~~L~~--~~~~g~~V~i~~~n~~~~~~~~l 683 (1146)
T PRK08633 615 PPLAEAWIDTAK-----RNWSRLAVAD----STGGELSYGKALTGALALARLLKR--ELKDEENVGILLPPSVAGALANL 683 (1146)
T ss_pred CCHHHHHHHHHH-----hcCCCcEEEc----CCCCcCcHHHHHHHHHHHHHHHHH--hCCCCCeEEEECCCchHHHHHHH
Confidence 456677766554 7899999982 235799999999999999999976 48999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc-------ccccccccCCcccc-----
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA-------SNVVDIKSWPTILD----- 1310 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~----- 1310 (1761)
||+++|++++|++|..|.+ ++.+++++++++++++++...+.+..... ...+...+......
T Consensus 684 a~~~~G~v~v~l~~~~~~~------~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1146)
T PRK08633 684 ALLLAGKVPVNLNYTASEA------ALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKL 757 (1146)
T ss_pred HHHHcCCEEEEeCCCcCHH------HHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHH
Confidence 9999999999999987777 99999999999999999877665542100 00010000000000
Q ss_pred -----CCCCccchhh-hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChh
Q psy14338 1311 -----TDDMPKKKLA-ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLG 1384 (1761)
Q Consensus 1311 -----~~~~~~~~~~-~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 1384 (1761)
....+..... .......++++++|+|||||||.||||+++|+++.+.+......+++.++|+++..+|++|.++
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g 837 (1146)
T PRK08633 758 TALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFG 837 (1146)
T ss_pred HHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHh
Confidence 0000000000 0013456899999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeec
Q psy14338 1385 FALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVA 1464 (1761)
Q Consensus 1385 ~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gG 1464 (1761)
+...++.+++.|+++++.++ .+++..+++.++++++|++.++|++++.+.+.. ...+.+++++|.+++||
T Consensus 838 ~~~~~~~~l~~g~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~lr~~~~gg 907 (1146)
T PRK08633 838 LTVTLWLPLLEGIKVVYHPD---PTDALGIAKLVAKHRATILLGTPTFLRLYLRNK-------KLHPLMFASLRLVVAGA 907 (1146)
T ss_pred HHHHHHHHHHCCCEEEEeCC---CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhcc-------ccCcccCCCeeeEEEcC
Confidence 87778999999999998775 368999999999999999999999999887521 22445788999999999
Q ss_pred CCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccc
Q psy14338 1465 EERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESG 1544 (1761)
Q Consensus 1465 e~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 1544 (1761)
|++++ ++.+++.+.++ .++++.||+||++.++............+. ....+..++|
T Consensus 908 ~~~~~-~~~~~~~~~~g------~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~vG 963 (1146)
T PRK08633 908 EKLKP-EVADAFEEKFG------IRILEGYGATETSPVASVNLPDVLAADFKR-----------------QTGSKEGSVG 963 (1146)
T ss_pred CcCCH-HHHHHHHHHhC------CCeecccccccCcceEEEecCccccccccc-----------------ccCCCCCCcc
Confidence 99999 88888887763 579999999998765543321111000000 0001234699
Q ss_pred cccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCC
Q psy14338 1545 KLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPA 1624 (1761)
Q Consensus 1545 ~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~ 1624 (1761)
+|++|++++|+|+++++++|+|+.|||+|+|++++.||+| +|+.|++.|... +++|||+|||+|++
T Consensus 964 ~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~t~~~~~~~-----~~~~~~~TGD~~~~------ 1029 (1146)
T PRK08633 964 MPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLG---DPEKTAEVIKDI-----DGIGWYVTGDKGHL------ 1029 (1146)
T ss_pred ccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccC---CccchHHHhhcC-----CCCCeEECCCEEEE------
Confidence 9999999999998889999999999999999999999999 999999998532 35699999999999
Q ss_pred CCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhcc--CcceeEEEee-----CCeEEEEEEeCCCc
Q psy14338 1625 GVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHK--KIAECAVFTW-----TNLLVVVVELDGNE 1697 (1761)
Q Consensus 1625 d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p--~V~~a~Vv~~-----~~~~~a~v~~~~~~ 1697 (1761)
|+| |+ ++++||+||+||++|+||+|.|||+ ++.+|| .+.+|+|++. ++.++++++. ..
T Consensus 1030 ~~~--------g~----l~~~gR~~d~i~~~G~~v~~~eiE~-~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~--~~ 1094 (1146)
T PRK08633 1030 DED--------GF----LTITDRYSRFAKIGGEMVPLGAVEE-ELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTC--GA 1094 (1146)
T ss_pred cCC--------ce----EEEEecccchhhhCcEEECHHHHHH-HHHhccCCCCceEEEEeccCCCCCcEEEEEEec--Cc
Confidence 999 99 9999999999999999999999999 899999 4667888864 4578888775 23
Q ss_pred hhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1698 SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1698 ~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
.+.++++++++++.+| .|++|..+++++ ++|+|++||+||++|++...
T Consensus 1095 ~~~~~l~~~~~~~~l~-~~~~P~~i~~~~--~iP~t~~GKi~r~~L~~~~~ 1142 (1146)
T PRK08633 1095 EDVEELKRAIKESGLP-NLWKPSRYFKVE--ALPLLGSGKLDLKGLKELAL 1142 (1146)
T ss_pred cCHHHHHHHHHhcCCC-cccCCcEEEEec--CcCCCCCCCCcHHHHHHHHH
Confidence 4567899988765588 999999999999 99999999999999998753
|
|
| >PRK08974 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-56 Score=583.77 Aligned_cols=497 Identities=20% Similarity=0.258 Sum_probs=398.2
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCcccc-CCCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSE-SSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~-~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.++.++|+.+++++|+++|+...+ +.+||+||.++++++|.+|+ + .|+++|++|+++++|+ .+
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~~------~~lTy~~l~~~~~~la~~L~--------~~~g~~~g~~V~i~~~~~--~~ 86 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINMG------EVMTFRKLEERSRAFAAYLQ--------NGLGLKKGDRVALMMPNL--LQ 86 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEECC------ccccHHHHHHHHHHHHHHHH--------HhcCCCCCCEEEEECCCC--HH
Confidence 468999999999999999998643 58999999999999999997 4 6899999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----ccceeccCCCccee---
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----GEVVAFKGWPKLTW--- 232 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--- 232 (1761)
+++++|||+++|++++|++|.++.+ ++.+++++++++++++++...+.+..... ..++..........
T Consensus 87 ~~~~~lA~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (560)
T PRK08974 87 YPIALFGILRAGMIVVNVNPLYTPR-----ELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKG 161 (560)
T ss_pred HHHHHHHHHHcCcEEeccCccCCHH-----HHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEeccccccccccc
Confidence 9999999999999999999999976 89999999999999998754332221100 00000000000000
Q ss_pred -----E------------E------eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH
Q psy14338 233 -----F------------V------TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA 289 (1761)
Q Consensus 233 -----~------------~------~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~ 289 (1761)
. . .+................++++++|+|||||||+||||+++|+++...+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~ 241 (560)
T PRK08974 162 TLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAA 241 (560)
T ss_pred ccccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHh
Confidence 0 0 0000000000011123467899999999999999999999999998877655443
Q ss_pred cC---CCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCC
Q psy14338 290 CH---YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK 366 (1761)
Q Consensus 290 ~~---~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~ 366 (1761)
+. ...++.++..+|++|.+++....+.++..|+++++... ..++..+++.++++++|++..+| +++..++...
T Consensus 242 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p-~~~~~l~~~~ 317 (560)
T PRK08974 242 YGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITN---PRDIPGFVKELKKYPFTAITGVN-TLFNALLNNE 317 (560)
T ss_pred hccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecC---ccCHHHHHHHHHhcCcceEcCcH-HHHHHHHhCc
Confidence 32 34456888999999988865557788899999888753 46789999999999999999986 5777777665
Q ss_pred CCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcc
Q psy14338 367 DHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLS 446 (1761)
Q Consensus 367 ~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 446 (1761)
.....++++||.+++| |+++++.+.++|.+.+ |.+ ++|.||+||++.+++.....
T Consensus 318 ~~~~~~~~~lr~~~~g--g~~~~~~~~~~~~~~~---g~~---~~~~YG~tE~~~~~~~~~~~----------------- 372 (560)
T PRK08974 318 EFQELDFSSLKLSVGG--GMAVQQAVAERWVKLT---GQY---LLEGYGLTECSPLVSVNPYD----------------- 372 (560)
T ss_pred CcccCCccceeEEEec--CccCCHHHHHHHHHHh---CCc---EEeeecccccCceeeccCCC-----------------
Confidence 5555667899999998 9999999999999877 443 99999999998765543311
Q ss_pred cceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCC
Q psy14338 447 YGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADG 526 (1761)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g 526 (1761)
......++|+|+++++++|+|++++ ++|.|+.|||+|+|+.+++||+++++.|++.|.
T Consensus 373 ------------~~~~~~~~G~~~~~~~~~i~~~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~-------- 430 (560)
T PRK08974 373 ------------LDYYSGSIGLPVPSTEIKLVDDDGN--EVPPGEPGELWVKGPQVMLGYWQRPEATDEVIK-------- 430 (560)
T ss_pred ------------CcccCCccccCcCCCEEEEECCCCC--CCCCCCceEEEEecCCcchhhcCChhhhhhhhh--------
Confidence 0122468999999999999999886 589999999999999999999999999998883
Q ss_pred CccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEE
Q psy14338 527 TALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVI 605 (1761)
Q Consensus 527 ~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~ 605 (1761)
++||+|||+|+++++|.++|+||+||+||++|++|+|.|||++|.+++.+ .+++|++.++. .++.++++
T Consensus 431 -----~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~ 500 (560)
T PRK08974 431 -----DGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKV-----LEVAAVGVPSEVSGEAVKIF 500 (560)
T ss_pred -----cCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCe-----eEEEEEeeecCCcceEEEEE
Confidence 68999999999999999999999999999999999999999999998887 79999998854 56677777
Q ss_pred EEeCC-CCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 606 AEQRP-DCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 606 v~~~~-~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++... ..+.+++++++++.|+.|++|..+ ..+++||+|++||++|++|++...+
T Consensus 501 v~~~~~~~~~~~l~~~l~~~l~~~~~P~~~-------~~~~~lP~t~~GK~~r~~l~~~~~~ 555 (560)
T PRK08974 501 VVKKDPSLTEEELITHCRRHLTGYKVPKLV-------EFRDELPKSNVGKILRRELRDEARA 555 (560)
T ss_pred EECCCCCCCHHHHHHHHHhhcccccCCcEE-------EEhhhCCCCCCCcEeHHHHHHHHHh
Confidence 76543 356788999999999999999986 4469999999999999999987653
|
|
| >PLN03102 acyl-activating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-56 Score=583.27 Aligned_cols=489 Identities=18% Similarity=0.201 Sum_probs=370.3
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
+++|+++|+. .+++++||+||+++++++|++|.+. |+++||+|+|+++|++++++++|||+++|++++||+|.+
T Consensus 25 ~~~p~~~Al~-----~~~~~~Ty~eL~~~~~~~a~~L~~~-Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~~~ 98 (579)
T PLN03102 25 ECYPNRTSII-----YGKTRFTWPQTYDRCCRLAASLISL-NITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINTRL 98 (579)
T ss_pred HhCCCCeEEE-----ECCcEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccccC
Confidence 4689999999 5678999999999999999999999 999999999999999999999999999999999999977
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----------cccccccCCc-------------cccCCCCc
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----------NVVDIKSWPT-------------ILDTDDMP 1315 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----------~~~~~~~~~~-------------~~~~~~~~ 1315 (1761)
+.+ ++.++++.++++++|++.+....+...... ..+....... +.......
T Consensus 99 ~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (579)
T PLN03102 99 DAT------SIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRGEPT 172 (579)
T ss_pred CHH------HHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhccCCC
Confidence 776 999999999999999987765544332110 0111100000 00000000
Q ss_pred cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhc
Q psy14338 1316 KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYS 1395 (1761)
Q Consensus 1316 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~ 1395 (1761)
............++++++|+|||||||.||||+++|+++..........+.+...+..+..+|++|..++ ...+.++..
T Consensus 173 ~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~-~~~~~~~~~ 251 (579)
T PLN03102 173 PSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGW-TFTWGTAAR 251 (579)
T ss_pred CcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcch-hHHHHHHHh
Confidence 0000000112356899999999999999999999999976555444445566666777778888888776 456778899
Q ss_pred CceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHH
Q psy14338 1396 GHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSA 1475 (1761)
Q Consensus 1396 G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~ 1475 (1761)
|+++++.+. +++..+++.|+++++|++.++|+++..|.+.. .......++++.+++||+++++ .+.++
T Consensus 252 g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~~~~~~~gg~~~~~-~~~~~ 319 (579)
T PLN03102 252 GGTSVCMRH----VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGN-------SLDLSPRSGPVHVLTGGSPPPA-ALVKK 319 (579)
T ss_pred cCcEEeecc----CChHHHHHHHHHcCCeEEEeChHHHHHHHhCc-------ccccCCcccceEEEECCCCCCH-HHHHH
Confidence 999998874 67889999999999999999999999997631 1122345578889999999988 67666
Q ss_pred HHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEE
Q psy14338 1476 FSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIA 1555 (1761)
Q Consensus 1476 ~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~ 1555 (1761)
+.+ + | ..+++.||+||+++.+........ + ..+.... ........+..|.|+++ +.|.
T Consensus 320 ~~~-~---g---~~i~~~YG~tE~~~~~~~~~~~~~----~---~~~~~~~------~~~~~~~~g~~~~~~~~--v~i~ 377 (579)
T PLN03102 320 VQR-L---G---FQVMHAYGLTEATGPVLFCEWQDE----W---NRLPENQ------QMELKARQGVSILGLAD--VDVK 377 (579)
T ss_pred HHH-c---C---CeEEeecCccccCccccccccccc----c---ccCCccc------ccccccCCCcccccccc--eEEe
Confidence 654 2 3 479999999998653322111000 0 0000000 00000011224445544 5566
Q ss_pred cCCCCCCCCC--CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCC
Q psy14338 1556 NPETKGQCGD--SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633 (1761)
Q Consensus 1556 d~~~~~~~p~--G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~ 1633 (1761)
|++.++++|. |+.|||+|+|+++++|||| +|+.|.+.| .+|||+|||+|++ |+|
T Consensus 378 ~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~---~~~~t~~~f---------~~gw~~TGDlg~~------d~d------ 433 (579)
T PLN03102 378 NKETQESVPRDGKTMGEIVIKGSSIMKGYLK---NPKATSEAF---------KHGWLNTGDVGVI------HPD------ 433 (579)
T ss_pred ccccccccCCCCCCceEEEEECcchhhhhcC---ChhhhHhhh---------ccCceecCceEEE------cCC------
Confidence 7666778875 4789999999999999999 999999998 3589999999999 999
Q ss_pred CCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc-h---------
Q psy14338 1634 GVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE-S--------- 1698 (1761)
Q Consensus 1634 g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~-~--------- 1698 (1761)
|+ ++|+||+||+||++|+||+|.|||+ ++.+||.|.+|+|++. ++.++++|++.... .
T Consensus 434 --G~----l~i~GR~~d~i~~~G~~v~p~eIE~-~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~ 506 (579)
T PLN03102 434 --GH----VEIKDRSKDIIISGGENISSVEVEN-VLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLV 506 (579)
T ss_pred --Ce----EEEEeccCcEEEECCEEECHHHHHH-HHHhCCCcceeEEEeccCccccceeEEEEEecCccccccccccccc
Confidence 99 9999999999999999999999999 8999999999999975 45788888764321 1
Q ss_pred -hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1699 -EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1699 -~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
...+++++++++ || .||+|..+++++ +||+|++||++|++|+++..+
T Consensus 507 ~~~~~l~~~~~~~-L~-~~~~P~~i~~~~--~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 507 TRERDLIEYCREN-LP-HFMCPRKVVFLQ--ELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred ccHHHHHHHHHhh-cc-cccCCeEEEEcc--cCCCCCcccccHHHHHHHHHH
Confidence 246799999997 88 999999999999 999999999999999998743
|
|
| >PRK13390 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-56 Score=576.30 Aligned_cols=477 Identities=16% Similarity=0.172 Sum_probs=369.8
Q ss_pred cCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1178 VAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1178 a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
|+++|+++|+... +.++++||+||.++++++|+.|.+. |+++||+|+++++|++++++++|||+++|++++|++|.
T Consensus 7 a~~~p~~~a~~~~---~~~~~lTy~el~~~~~~la~~L~~~-gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~ 82 (501)
T PRK13390 7 AQIAPDRPAVIVA---ETGEQVSYRQLDDDSAALARVLYDA-GLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHH 82 (501)
T ss_pred hhhCCCCcEEEec---CCCeEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccC
Confidence 4578999999842 1357899999999999999999999 99999999999999999999999999999999999998
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc--ccccc-cCCccccCCCCccchhhhccCCCCCCCEEEE
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN--VVDIK-SWPTILDTDDMPKKKLAALYRAPTAEMLAYL 1334 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 1334 (1761)
+|.+ ++.++++++++++++++.............. .+... ..... ..................+.++|
T Consensus 83 ~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~i 153 (501)
T PRK13390 83 LTAP------EADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGF---GSFEAALAGAGPRLTEQPCGAVM 153 (501)
T ss_pred CCHH------HHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCccccc---ccHHHHhcccCCCCCCCcccEEE
Confidence 7777 9999999999999999876543322211100 00000 00000 00000000000001122357999
Q ss_pred EeccCCCCCCceEEc--cHHHHHHHH----HHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccc
Q psy14338 1335 DFSVSTTGMLAGIKM--SHAAVTSLC----RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 1408 (1761)
Q Consensus 1335 i~TSGSTG~PKgV~~--sh~~l~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~ 1408 (1761)
+|||||||.||||++ +|.++.... ......+++..+++++..+|++|..++. ..+..+..|+++++.+.
T Consensus 154 ~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~-~~~~~~~~g~~~~~~~~---- 228 (501)
T PRK13390 154 LYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLR-WCSMVHALGGTVVLAKR---- 228 (501)
T ss_pred EeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHH-HHHHHHhcCceEEEcCC----
Confidence 999999999999995 566655432 2234467788888888888888887764 34556778999988764
Q ss_pred cCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCc
Q psy14338 1409 VNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPR 1488 (1761)
Q Consensus 1409 ~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~ 1488 (1761)
+++..+++.|+++++|++.++|+++..+++... ......+++++|.+++||+++++ .+.+.+.+.++ .
T Consensus 229 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----~~~~~~~~~~l~~v~~~g~~~~~-~~~~~~~~~~~------~ 296 (501)
T PRK13390 229 FDAQATLGHVERYRITVTQMVPTMFVRLLKLDA-----DVRTRYDVSSLRAVIHAAAPCPV-DVKHAMIDWLG------P 296 (501)
T ss_pred cCHHHHHHHHHHcCCeEEEecHHHHHHHHhccc-----hhcccCChhhhheEEEcCCCCCH-HHHHHHHHhcC------C
Confidence 689999999999999999999999998875311 11134567899999999999998 77777776653 3
Q ss_pred cccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcc
Q psy14338 1489 AVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHL 1568 (1761)
Q Consensus 1489 ~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~ 1568 (1761)
.+++.||+||++.++..... .. ....+++|+|++| .++|+|++ ++++|.|++
T Consensus 297 ~~~~~YG~tE~~~~~~~~~~------------~~--------------~~~~~~~G~~~~g-~~~i~d~~-~~~~~~g~~ 348 (501)
T PRK13390 297 IVYEYYSSTEAHGMTFIDSP------------DW--------------LAHPGSVGRSVLG-DLHICDDD-GNELPAGRI 348 (501)
T ss_pred ceeeeecccccCceEEecch------------hh--------------ccCCCCcCCcccc-eEEEECCC-CCCCCCCCc
Confidence 68999999997653321110 00 0012359999999 79999954 899999999
Q ss_pred eEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEccc
Q psy14338 1569 GEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGAL 1648 (1761)
Q Consensus 1569 GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~ 1648 (1761)
|||+|+|++++.||+| +|+.|++.|.. .+++||+|||+|++ |+| |+ ++|.||.
T Consensus 349 Gel~v~~~~~~~gy~~---~~~~t~~~~~~------~~~~w~~tGDl~~~------~~d--------g~----l~~~gR~ 401 (501)
T PRK13390 349 GTVYFERDRLPFRYLN---DPEKTAAAQHP------AHPFWTTVGDLGSV------DED--------GY----LYLADRK 401 (501)
T ss_pred eEEEEecCCccccccC---ChhhhHHhhcc------CCCceEEcCceEEE------CCC--------Ce----EEEeecc
Confidence 9999999999999999 99999998842 23689999999999 999 99 9999999
Q ss_pred CCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC-c---hhHhhHHHHHHHHHhhhcCcee
Q psy14338 1649 DETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN-E---SEALDLVPLVTNAVLEEHHLIV 1719 (1761)
Q Consensus 1649 dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~-~---~~~~~l~~~l~~~~Lp~~~~vP 1719 (1761)
||+||++|+||+|.|||+ ++..||+|.+|+|++. ++.++++++.... . ...++++++++++ |+ .||+|
T Consensus 402 ~~~i~~~G~~v~p~eIE~-~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~-l~-~~~~P 478 (501)
T PRK13390 402 SFMIISGGVNIYPQETEN-ALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYTRSR-IA-HYKAP 478 (501)
T ss_pred ccceeECCeeeCHHHHHH-HHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHHHHh-cc-cCCCC
Confidence 999999999999999999 8899999999999974 4577788776422 1 2245889999987 88 99999
Q ss_pred eEEEEECCCCccCCCchhhhHHHHH
Q psy14338 1720 GVAVVVDPGVVPINSRGEKQRMHLR 1744 (1761)
Q Consensus 1720 ~~i~~v~~~~lP~t~~GKvdR~~L~ 1744 (1761)
..+++++ +||+|++||++|++|+
T Consensus 479 ~~~~~~~--~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 479 RSVEFVD--ELPRTPTGKLVKGLLR 501 (501)
T ss_pred cEEEEec--cCCCCCccceehhhcC
Confidence 9999999 9999999999999974
|
|
| >PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-56 Score=567.52 Aligned_cols=445 Identities=17% Similarity=0.161 Sum_probs=374.0
Q ss_pred HHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHH
Q psy14338 86 AIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFY 165 (1761)
Q Consensus 86 ~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~l 165 (1761)
..+.+++++|+++|+...+ +.+||+||.++++++|..|. +.|+++|++|+++++|+ +++++++|
T Consensus 8 ~~~~~a~~~~~~~a~~~~~------~~~ty~el~~~~~~~a~~L~--------~~g~~~~~~v~l~~~~~--~~~~~~~l 71 (458)
T PRK09029 8 PWRHWAQVRPQAIALRLND------EVLTWQQLCARIDQLAAGFA--------QQGVVEGSGVALRGKNS--PETLLAYL 71 (458)
T ss_pred hHHHHHHhCCCceeeecCC------cceeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEecCCC--HHHHHHHH
Confidence 3466788999999998644 58999999999999999999 88999999999999999 99999999
Q ss_pred HHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCC
Q psy14338 166 GCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDW 245 (1761)
Q Consensus 166 AvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1761)
||+++|++++|++|..+.+ ++..++++++++++++++.... +... . ... .. ... .
T Consensus 72 a~~~~G~~~v~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~-~~~~--------~---~~~---~~---~~~--~ 126 (458)
T PRK09029 72 ALLQCGARVLPLNPQLPQP-----LLEELLPSLTLDFALVLEGENT-FSAL--------T---SLH---LQ---LVE--G 126 (458)
T ss_pred HHHHcCCEEeecCCCCCHH-----HHHHHHHhcCCCEEEEcCcccc-hhhc--------c---ccc---cc---ccc--c
Confidence 9999999999999999876 8999999999999999876432 1110 0 000 00 000 0
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEE
Q psy14338 246 APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAV 325 (1761)
Q Consensus 246 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lv 325 (1761)
.......++++++++|||||||+||||+++|++++..+......+++.++|+++..+|++|.+++.. ++.+|..|++++
T Consensus 127 ~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~-~~~~l~~G~~v~ 205 (458)
T PRK09029 127 AHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGI-VWRWLYAGATLV 205 (458)
T ss_pred cCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHH-HHHHHhCCceEE
Confidence 1123356889999999999999999999999999999998888899999999999999999999874 788999999999
Q ss_pred EeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCC
Q psy14338 326 YIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGL 405 (1761)
Q Consensus 326 i~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~ 405 (1761)
+.+. ..+.+.+. ++|++..+| +++..++..... ..+||.+++| |+++++.+.+.|.+. |.
T Consensus 206 ~~~~-------~~~~~~i~--~~t~~~~~P-~~~~~l~~~~~~----~~~l~~i~~g--G~~~~~~~~~~~~~~----g~ 265 (458)
T PRK09029 206 VRDK-------QPLEQALA--GCTHASLVP-TQLWRLLDNRSE----PLSLKAVLLG--GAAIPVELTEQAEQQ----GI 265 (458)
T ss_pred eCCh-------HHHHHHHh--hceeeecCh-HHHHHHHhcccc----CCcceEEEEC--CCCCCHHHHHHHHHc----CC
Confidence 8772 44666663 789998886 577777754322 3579999999 999999999888753 55
Q ss_pred CCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcc
Q psy14338 406 RPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485 (1761)
Q Consensus 406 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~ 485 (1761)
+ +++.||+||++...+.... ....++|+|+++++++|+|
T Consensus 266 ~---~~~~YG~tE~~~~~~~~~~--------------------------------~~~~~~G~~~~~~~~~i~~------ 304 (458)
T PRK09029 266 R---CWCGYGLTEMASTVCAKRA--------------------------------DGLAGVGSPLPGREVKLVD------ 304 (458)
T ss_pred c---EeccccccccCcceeccCC--------------------------------CCCCCCCCCCCCCEEEEeC------
Confidence 4 9999999999754432221 0124699999999999975
Q ss_pred cCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcc
Q psy14338 486 LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRK 565 (1761)
Q Consensus 486 ~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~r 565 (1761)
|||+|+|+.++.||+++|+.+...+ +++||+|||+|+++ ||.++|+||+||+||++|++
T Consensus 305 -------gel~v~g~~~~~gY~~~~~~~~~~~-------------~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~ 363 (458)
T PRK09029 305 -------GEIWLRGASLALGYWRQGQLVPLVN-------------DEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEG 363 (458)
T ss_pred -------CEEEEecCceeeeeecCcccccccc-------------CCCccCCCCcEEEe-CCEEEEecccccceeeCCEE
Confidence 8999999999999999999886432 37899999999999 99999999999999999999
Q ss_pred cChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCC
Q psy14338 566 HNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPP 644 (1761)
Q Consensus 566 Ie~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~ 644 (1761)
|+|.|||+.|.+++.+ .+++|++.++. .++.++++++.....+.++++++|+++||.|++|..+ +.+
T Consensus 364 v~p~eiE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~l~~~~~~~l~~~~~P~~~-------~~~ 431 (458)
T PRK09029 364 IQPEEIERVINQHPLV-----QQVFVVPVADAEFGQRPVAVVESDSEAAVVNLAEWLQDKLARFQQPVAY-------YLL 431 (458)
T ss_pred eCHHHHHHHHhcCCCc-----ceEEEEccCCcccCceEEEEEEcCcccCHHHHHHHHHhhchhccCCeEE-------EEe
Confidence 9999999999998888 79999998854 5788999998877778899999999999999999986 556
Q ss_pred CCccCCCCCcccHHHHHHHHHc
Q psy14338 645 NYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 645 ~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+++|+|.+||++|+.|++++.+
T Consensus 432 ~~~p~t~~gKi~r~~L~~~~~~ 453 (458)
T PRK09029 432 PPELKNGGIKISRQALKEWVAQ 453 (458)
T ss_pred cccccCcCCCcCHHHHHHHHHh
Confidence 9999999999999999998764
|
|
| >PRK10946 entE enterobactin synthase subunit E; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-56 Score=578.72 Aligned_cols=486 Identities=15% Similarity=0.207 Sum_probs=390.9
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+++ + |+++|++ ++++.+||+||.++++++|+.|.+. |+++|++|+++++|++++++++|
T Consensus 25 ~~~~~~~~~~a------~-p~~~a~~-----~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~v~~~n~~~~~~~~l 91 (536)
T PRK10946 25 LPLTDILTRHA------A-SDAIAVI-----CGERQFSYRELNQASDNLACSLRRQ-GIKPGDTALVQLGNVAEFYITFF 91 (536)
T ss_pred ccHHHHHHHhh------C-CCCeEEE-----eCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCChHHHHHHHH
Confidence 34555554443 2 9999999 6778999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH--------HHHHhhhcc-ccccccc------cCCc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV--------IKLLKSKEA-SNVVDIK------SWPT 1307 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~--------~~~~~~~~~-~~~~~~~------~~~~ 1307 (1761)
||+++|++++++++..+.. ++..+++++++++++++... ...+..... ...+... .+..
T Consensus 92 a~~~~G~v~v~~~~~~~~~------~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 165 (536)
T PRK10946 92 ALLKLGVAPVNALFSHQRS------ELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDD 165 (536)
T ss_pred HHHHcCeEEecCCccccHH------HHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHH
Confidence 9999999877665554444 89999999999999997542 111211110 0000000 0000
Q ss_pred cccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHH
Q psy14338 1308 ILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFAL 1387 (1761)
Q Consensus 1308 ~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 1387 (1761)
.+... ..........+++++|++|||||||.||||+++|+++...+......+++.++|+++..+|++|.+++..
T Consensus 166 ~~~~~-----~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~ 240 (536)
T PRK10946 166 AINHP-----AEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSS 240 (536)
T ss_pred HhhCc-----ccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchh
Confidence 00000 0011123346789999999999999999999999999999999888999999999999999999887654
Q ss_pred -HHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCC
Q psy14338 1388 -WVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEE 1466 (1761)
Q Consensus 1388 -~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~ 1466 (1761)
.++.+|..|+++++.+. +++..+++.++++++|++.++|+++..+++.+. .......+++||.+++||++
T Consensus 241 ~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~-----~~~~~~~~~~l~~v~~gg~~ 311 (536)
T PRK10946 241 PGALGVFLAGGTVVLAPD----PSATLCFPLIEKHQVNVTALVPPAVSLWLQAIA-----EGGSRAQLASLKLLQVGGAR 311 (536)
T ss_pred hhHHHHhhcCcEEEECCC----CCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhc-----ccCccccccceeEEEECCCC
Confidence 57888999999998774 689999999999999999999999999976421 11233457899999999999
Q ss_pred CChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccc
Q psy14338 1467 RPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKL 1546 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 1546 (1761)
+++ .+.++|.+.++ +.+++.||+||+...... ... +......++|+|
T Consensus 312 l~~-~~~~~~~~~~g------~~~~~~YG~tE~~~~~~~-~~~-------------------------~~~~~~~~~G~p 358 (536)
T PRK10946 312 LSE-TLARRIPAELG------CQLQQVFGMAEGLVNYTR-LDD-------------------------SDERIFTTQGRP 358 (536)
T ss_pred CCH-HHHHHHHHhcC------CeEEEeecccccceeeec-CCC-------------------------ccccccccCCcc
Confidence 999 78777776653 579999999995432211 000 001123469999
Q ss_pred c-CCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCC
Q psy14338 1547 L-PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAG 1625 (1761)
Q Consensus 1547 ~-~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d 1625 (1761)
+ +++.++|+|++ +++++.|++|||+|+|+.++.||+| +++.|++.| ..++||+|||+|++ |
T Consensus 359 ~~~~~~v~i~d~~-~~~~~~g~~Gel~v~g~~~~~GY~~---~~~~t~~~~--------~~d~~~~TGDl~~~------d 420 (536)
T PRK10946 359 MSPDDEVWVADAD-GNPLPQGEVGRLMTRGPYTFRGYYK---SPQHNASAF--------DANGFYCSGDLVSI------D 420 (536)
T ss_pred cCCCceEEEECCC-CCCCCCCCccEEEEecCccchhhcC---Ccccchhhc--------ccCCceecCceEEE------C
Confidence 9 79999999955 8999999999999999999999999 999999998 46789999999999 9
Q ss_pred CCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhH
Q psy14338 1626 VAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEA 1700 (1761)
Q Consensus 1626 ~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~ 1700 (1761)
+| |+ ++++||.||+||++|++|+|.|||+ ++.+||+|.+++|++. ++.++++++.... .+.
T Consensus 421 ~~--------G~----l~~~gR~~d~i~~~G~~v~~~eiE~-~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~-~~~ 486 (536)
T PRK10946 421 PD--------GY----ITVVGREKDQINRGGEKIAAEEIEN-LLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP-LKA 486 (536)
T ss_pred CC--------Cc----EEEeccccceeecCCEEEcHHHHHH-HHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC-CCH
Confidence 99 99 9999999999999999999999999 8999999999999974 4567888876544 677
Q ss_pred hhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1701 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1701 ~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+++++++++..|+ .||+|..+++++ ++|+|++||++|++|++++..
T Consensus 487 ~~l~~~~~~~~l~-~~~~P~~~~~~~--~iP~t~~GKv~r~~L~~~~~~ 532 (536)
T PRK10946 487 VQLRRFLREQGIA-EFKLPDRVECVD--SLPLTAVGKVDKKQLRQWLAS 532 (536)
T ss_pred HHHHHHHHhCCcc-ccccCcEEEEec--cCCCCCCCcccHHHHHHHHHh
Confidence 8999999874488 999999999999 999999999999999998743
|
|
| >PRK12492 long-chain-fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-56 Score=583.13 Aligned_cols=489 Identities=16% Similarity=0.232 Sum_probs=386.1
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.|..++ .++|+++|+. ..++.+||.||.++++++|+.|.+..|+++||+|+++++|++++++++||
T Consensus 25 ~~~~~l~~~~-----~~~p~~~a~~-----~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la 94 (562)
T PRK12492 25 SVVEVFERSC-----KKFADRPAFS-----NLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFG 94 (562)
T ss_pred cHHHHHHHHH-----HhCCCCeeEe-----cCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 3445555544 3679999998 56789999999999999999998733899999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc----cccc------ccCCccc----
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN----VVDI------KSWPTIL---- 1309 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~----~~~~------~~~~~~~---- 1309 (1761)
|+++|++++|++|.+|.+ ++.++++++++++++++......+....... .+.. ..+..+.
T Consensus 95 ~~~~G~v~v~~~~~~~~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (562)
T PRK12492 95 ALRAGLIVVNTNPLYTAR------EMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTV 168 (562)
T ss_pred HHHcCeEEeccCccCCHH------HHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccc
Confidence 999999999999988877 9999999999999999765433222111000 0000 0000000
Q ss_pred --------cCCCCcc-----------chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC----
Q psy14338 1310 --------DTDDMPK-----------KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE---- 1366 (1761)
Q Consensus 1310 --------~~~~~~~-----------~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~---- 1366 (1761)
.....+. ...........++++++|+|||||||.||||+++|+++.+.+......++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~ 248 (562)
T PRK12492 169 VDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGP 248 (562)
T ss_pred cccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccc
Confidence 0000000 00000112345689999999999999999999999999887776665543
Q ss_pred -----cCCC-CeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhh
Q psy14338 1367 -----LYPS-RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGL 1440 (1761)
Q Consensus 1367 -----~~~~-d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~ 1440 (1761)
+..+ ++.+..+|++|.++....++..+..|+++++... .+++..+++.|+++++|++..+|+++..+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~ 325 (562)
T PRK12492 249 DGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITN---PRDIPGFIKELGKWRFSALLGLNTLFVALMDHP 325 (562)
T ss_pred cccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecC---CcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCc
Confidence 2233 3456778888888876667778888988877654 358999999999999999999999999887631
Q ss_pred cCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEeccc
Q psy14338 1441 SGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLR 1520 (1761)
Q Consensus 1441 ~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~ 1520 (1761)
.....+++++|.+++||+++++ .+.++|.+.+. ..+++.||+||++.++.......
T Consensus 326 -------~~~~~~~~~lr~~~~gG~~~~~-~~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~~~---------- 381 (562)
T PRK12492 326 -------GFKDLDFSALKLTNSGGTALVK-ATAERWEQLTG------CTIVEGYGLTETSPVASTNPYGE---------- 381 (562)
T ss_pred -------CcccccccceeEEEeccccCCH-HHHHHHHHHhC------CceeeccCccccCceeeecCCcc----------
Confidence 2234567899999999999999 77788777653 57999999999766543221100
Q ss_pred ccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhc
Q psy14338 1521 ALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARL 1600 (1761)
Q Consensus 1521 ~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p 1600 (1761)
....+++|+|+++++++|+|++ ++++|.|+.|||+|+|+.+++|||+ +|+.|.+.|
T Consensus 382 ----------------~~~~~~~G~p~~~~~v~ivd~~-~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~t~~~~---- 437 (562)
T PRK12492 382 ----------------LARLGTVGIPVPGTALKVIDDD-GNELPLGERGELCIKGPQVMKGYWQ---QPEATAEAL---- 437 (562)
T ss_pred ----------------cccCCccceecCCCEEEEECCC-CCCCCCCCceEEEEeCCcccccccc---Cchhhhhcc----
Confidence 0012359999999999999965 8999999999999999999999999 999999988
Q ss_pred ccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEE
Q psy14338 1601 VTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAV 1680 (1761)
Q Consensus 1601 ~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~V 1680 (1761)
..++||+|||+|++ +++ |+ ++|.||+||+||++|++|+|.|||. ++.+||.|.+|+|
T Consensus 438 ----~~~g~~~TGD~g~~------~~~--------G~----l~i~GR~~~~i~~~G~~i~~~eIE~-~l~~~~~v~~~~v 494 (562)
T PRK12492 438 ----DAEGWFKTGDIAVI------DPD--------GF----VRIVDRKKDLIIVSGFNVYPNEIED-VVMAHPKVANCAA 494 (562)
T ss_pred ----cCCCceecCcEEEE------CCC--------Ce----EEEecccCCeEEECCEEECHHHHHH-HHHhCCCeeEEEE
Confidence 35689999999999 999 99 9999999999999999999999999 8999999999999
Q ss_pred Eee-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHH
Q psy14338 1681 FTW-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 1746 (1761)
Q Consensus 1681 v~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~ 1746 (1761)
++. ++.++++++......+.++++++++++ |+ .|++|..|++++ +||+|++||++|++|++.
T Consensus 495 ~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~~~~~-l~-~~~~P~~i~~~~--~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 495 IGVPDERSGEAVKLFVVARDPGLSVEELKAYCKEN-FT-GYKVPKHIVLRD--SLPMTPVGKILRRELRDI 561 (562)
T ss_pred EeccCCCCCceEEEEEEeCCCCCCHHHHHHHHHHh-cc-cccCCcEEEEec--cCCCCCCCceeHHHHHhh
Confidence 974 346778877654455678999999997 88 899999999999 999999999999999864
|
|
| >PRK09088 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-56 Score=571.08 Aligned_cols=474 Identities=17% Similarity=0.218 Sum_probs=384.6
Q ss_pred cCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1178 VAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1178 a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
++.+||++|+... .+++.+||+||.++++++|++|.+. |+++|++|+++++|++++++++|||+++|++++|++|.
T Consensus 5 a~~~p~~~a~~~~---~~~~~~ty~~l~~~v~~~a~~l~~~-g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~ 80 (488)
T PRK09088 5 ARLQPQRLAAVDL---ALGRRWTYAELDALVGRLAAVLRRR-GCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWR 80 (488)
T ss_pred hhhCCCceEEEec---CCCcEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCcc
Confidence 3577999998731 1467999999999999999999998 99999999999999999999999999999999999997
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEec
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFS 1337 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~T 1337 (1761)
.+.+ ++.+++++++++++|+++...... ...+....+....... .........++++++++||
T Consensus 81 ~~~~------~~~~~~~~~~~~~ii~~~~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~T 143 (488)
T PRK09088 81 LSAS------ELDALLQDAEPRLLLGDDAVAAGR-----TDVEDLAAFIASADAL------EPADTPSIPPERVSLILFT 143 (488)
T ss_pred CCHH------HHHHHHHhCCCCEEEEcchhhccc-----ccccchhhhhhhcccc------ccccCCCCCCCCceEEEeC
Confidence 7776 999999999999999987543210 0001111110000000 0011123456789999999
Q ss_pred cCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHH
Q psy14338 1338 VSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSA 1417 (1761)
Q Consensus 1338 SGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~ 1417 (1761)
|||||.||||+++|+++.+.+..+.....+..+|+++..+|++|.+++...++.++..|+++++.+. +++..++..
T Consensus 144 SGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~ 219 (488)
T PRK09088 144 SGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNG----FEPKRTLGR 219 (488)
T ss_pred CCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCC----CCHHHHHHH
Confidence 9999999999999999998888888777888889999999999999987778888999999988764 688889888
Q ss_pred HH--hcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccccccc
Q psy14338 1418 VS--QYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFG 1495 (1761)
Q Consensus 1418 i~--~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG 1495 (1761)
+. ++++|+++.+|++++.+.+.. ......+++||.+++||++++. ...+.+.+. | ..+++.||
T Consensus 220 ~~~~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~l~~~~~gG~~~~~-~~~~~~~~~----g---~~v~~~YG 284 (488)
T PRK09088 220 LGDPALGITHYFCVPQMAQAFRAQP-------GFDAAALRHLTALFTGGAPHAA-EDILGWLDD----G---IPMVDGFG 284 (488)
T ss_pred HHhhccCCcEEeeHHHHHHHHHhCc-------CcCccccccceEEEecCCCCCH-HHHHHHHHh----C---Cceeeeec
Confidence 86 489999999999999886521 1234457899999999999998 554544432 3 56999999
Q ss_pred ccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcC
Q psy14338 1496 CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQS 1575 (1761)
Q Consensus 1496 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g 1575 (1761)
+||++.+...... .... ..+.+++|+|+++++++|+|++ +++++.|++|||+|+|
T Consensus 285 ~TE~~~~~~~~~~----------~~~~--------------~~~~~~vG~~~~~~~~~i~d~~-~~~~~~g~~Gel~v~~ 339 (488)
T PRK09088 285 MSEAGTVFGMSVD----------CDVI--------------RAKAGAAGIPTPTVQTRVVDDQ-GNDCPAGVPGELLLRG 339 (488)
T ss_pred ccccccccccCCC----------cccc--------------cccCCccccCCCCcEEEEECCC-CCCCcCCCceEEEEEC
Confidence 9998654321110 0000 0012459999999999999955 8999999999999999
Q ss_pred CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeC
Q psy14338 1576 PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLR 1655 (1761)
Q Consensus 1576 ~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~ 1655 (1761)
++++.||+| +++.|++.| .++|||+|||+|++ ++| |+ ++|.||+||+||++
T Consensus 340 ~~~~~gY~~---~~~~~~~~~--------~~~g~~~TGDl~~~------~~~--------g~----l~i~GR~~d~i~~~ 390 (488)
T PRK09088 340 PNLSPGYWR---RPQATARAF--------TGDGWFRTGDIARR------DAD--------GF----FWVVDRKKDMFISG 390 (488)
T ss_pred CccchhhcC---Chhhhhhhh--------cCCCCeeecceEEE------cCC--------Cc----EEEeccccceEEeC
Confidence 999999999 999999888 35799999999999 999 99 99999999999999
Q ss_pred CeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHHHHHHhhhcCceeeEEEEECCCC
Q psy14338 1656 GMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGV 1729 (1761)
Q Consensus 1656 G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~ 1729 (1761)
|++|+|.|||+ +|..||+|.+++|++. ++..+++|+... ...+.++++++|+++ |+ .|++|..|++++ +
T Consensus 391 G~~i~~~~iE~-~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-~~~~p~~i~~~~--~ 465 (488)
T PRK09088 391 GENVYPAEIEA-VLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTR-LA-KYKVPKHLRLVD--A 465 (488)
T ss_pred CEEECHHHHHH-HHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhh-Cc-CCCCCCEEEEcc--c
Confidence 99999999999 8999999999999974 346677777643 334667899999997 88 999999999999 9
Q ss_pred ccCCCchhhhHHHHHHHHHcC
Q psy14338 1730 VPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1730 lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
||+|++||++|++|++++.+.
T Consensus 466 iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 466 LPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred CCCCCCCceeHHHHHHHHHhc
Confidence 999999999999999988654
|
|
| >PRK08316 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-56 Score=577.19 Aligned_cols=491 Identities=18% Similarity=0.200 Sum_probs=402.7
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.+..++. ++|+++|+. +.++.+||+||.++++++|..|.+. |+++|++|+++++|+++++++++
T Consensus 11 ~~l~~~l~~~a~-----~~~~~~a~~-----~~~~~~Ty~~l~~~~~~~a~~L~~~-gi~~~~~V~l~~~~~~~~~~~~~ 79 (523)
T PRK08316 11 QTIGDILRRSAR-----RYPDKTALV-----FGDRSWTYAELDAAVNRVAAALLDL-GLKKGDRVAALGHNSDAYALLWL 79 (523)
T ss_pred CCHHHHHHHHHH-----HCCCCeEEE-----ECCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHH
Confidence 345666665554 679999999 5678999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCc----------cccCC
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPT----------ILDTD 1312 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 1312 (1761)
||+++|++++|++|..+.+ ++..+++.+++++++++......+.............+.. .....
T Consensus 80 a~~~~G~~~v~l~~~~~~~------~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (523)
T PRK08316 80 ACARAGAVHVPVNFMLTGE------ELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFA 153 (523)
T ss_pred HHHhcCcEEEecccccCHH------HHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHH
Confidence 9999999999999977776 9999999999999999987665544321110000000000 00000
Q ss_pred CC-ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1313 DM-PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1313 ~~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
.. .............++++++++|||||||.||+|+++|+++.+.+......+++.++++++..+|++|..++...++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~ 233 (523)
T PRK08316 154 DWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGP 233 (523)
T ss_pred HHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHH
Confidence 00 00000011234567899999999999999999999999999998888888999999999999999998887655667
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
++..|+++++.+. .++..+++.|+++++|++.++|+++..+++.. .....++++||.+++||+.++. .
T Consensus 234 ~~~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~l~~~~~gg~~~~~-~ 301 (523)
T PRK08316 234 YLYVGATNVILDA----PDPELILRTIEAERITSFFAPPTVWISLLRHP-------DFDTRDLSSLRKGYYGASIMPV-E 301 (523)
T ss_pred HHhcCceEEEecC----CCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCc-------ccccCCcccceEEEEcCCcCCH-H
Confidence 7899999999874 58999999999999999999999999887631 2244578899999999999998 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+.+.+.++. ..+++.||+||++.++...... ......+++|+|+++++
T Consensus 302 ~~~~~~~~~~~-----~~~~~~YG~tE~~~~~~~~~~~-------------------------~~~~~~~~~G~~~~~~~ 351 (523)
T PRK08316 302 VLKELRERLPG-----LRFYNCYGQTEIAPLATVLGPE-------------------------EHLRRPGSAGRPVLNVE 351 (523)
T ss_pred HHHHHHHHcCC-----CceeeeecccccCccccccCcc-------------------------ccccccCCcccCCCCcE
Confidence 88888877643 5799999999987654332110 00012346999999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPV 1631 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~ 1631 (1761)
++|+|++ +++++.|+.|||+++|+.++.||++ +++.|++.| .++||+|||+|++ ++|
T Consensus 352 ~~i~~~~-~~~~~~g~~Gei~v~~~~~~~~y~~---~~~~~~~~~---------~~~~~~TGDl~~~------~~~---- 408 (523)
T PRK08316 352 TRVVDDD-GNDVAPGEVGEIVHRSPQLMLGYWD---DPEKTAEAF---------RGGWFHSGDLGVM------DEE---- 408 (523)
T ss_pred EEEEcCC-CCCCCCCCcceEEEECCchhhhhcC---CHHHHHHHh---------hCCCeeccceEEE------cCC----
Confidence 9999965 8999999999999999999999999 999999998 3689999999999 999
Q ss_pred CCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHH
Q psy14338 1632 PPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVP 1705 (1761)
Q Consensus 1632 ~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~ 1705 (1761)
|. ++++||+||+||++|.+|+|.|||+ ++.++++|.+++|++. ++.++++++... ...+.+++++
T Consensus 409 ----g~----l~i~gR~~~~i~~~G~~i~~~~iE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 479 (523)
T PRK08316 409 ----GY----ITVVDRKKDMIKTGGENVASREVEE-ALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDELIA 479 (523)
T ss_pred ----ce----EEEecccccEEEeCCeEECHHHHHH-HHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHHHHH
Confidence 99 9999999999999999999999999 8999999999999973 457888887743 3355678999
Q ss_pred HHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1706 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1706 ~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
+++++ |+ .|++|..+++++ ++|+|++||++|++|++.+.
T Consensus 480 ~~~~~-l~-~~~~p~~i~~v~--~~p~t~~gKi~r~~l~~~~~ 518 (523)
T PRK08316 480 HCRAR-LA-GFKVPKRVIFVD--ELPRNPSGKILKRELRERYA 518 (523)
T ss_pred HHHHh-cc-cCCCCcEEEEec--CCCCCCccceeHHHHHHHHH
Confidence 99987 88 999999999999 99999999999999999984
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-56 Score=629.73 Aligned_cols=490 Identities=17% Similarity=0.201 Sum_probs=389.6
Q ss_pred hhHHHHHHHHhhhcC-CCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGSATY-KAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~p-d~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.++.+.|.++++++| +++|+.+.+ + +++||+||+++++++|+.|+ . |+++||+|+++++|+ ++
T Consensus 631 ~~~~~~l~~~~~~~~~~~~ai~~~~--~---~~~Ty~el~~~~~~lA~~L~--------~-g~~~gd~V~i~~~n~--~~ 694 (1140)
T PRK06814 631 RTLFEALIEAAKIHGFKKLAVEDPV--N---GPLTYRKLLTGAFVLGRKLK--------K-NTPPGENVGVMLPNA--NG 694 (1140)
T ss_pred CCHHHHHHHHHHHcCCCCeEeECCC--C---CccCHHHHHHHHHHHHHHHH--------h-cCCCCCeEEEEcCCc--hH
Confidence 567788888888886 566765422 2 48999999999999999997 5 899999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCc--c----cc-cccceeccCCCc-ce
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLP--K----TA-AGEVVAFKGWPK-LT 231 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~--~----~~-~~~~~~~~~~~~-~~ 231 (1761)
+++++|||+++|++++|+||.++.+ ++.+++++++++++++++...+... . .. ...++..++... ..
T Consensus 695 ~~~~~la~~~~G~v~v~l~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 769 (1140)
T PRK06814 695 AAVTFFALQSAGRVPAMINFSAGIA-----NILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIG 769 (1140)
T ss_pred HHHHHHHHHHCCCEEEEcCCCCCHH-----HHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCC
Confidence 9999999999999999999999976 8999999999999999876443211 0 00 001111111000 00
Q ss_pred eE-EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhh
Q psy14338 232 WF-VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 232 ~~-~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
.. ..+................++|++||+|||||||+||||+++|+++.+.+......++++++|++++++|++|.+++
T Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 849 (1140)
T PRK06814 770 LADKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGL 849 (1140)
T ss_pred hHHHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHH
Confidence 00 00000000000011113578999999999999999999999999999999988889999999999999999999998
Q ss_pred HHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCH
Q psy14338 311 WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSL 390 (1761)
Q Consensus 311 ~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~ 390 (1761)
...++.++..|+++++.+. ..++..+.+.++++++|++..+| +++..+.... ...+++++|.+++| |+++++
T Consensus 850 ~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p-~~l~~l~~~~--~~~~~~~lr~v~~g--g~~l~~ 921 (1140)
T PRK06814 850 TGGLVLPLLSGVKVFLYPS---PLHYRIIPELIYDTNATILFGTD-TFLNGYARYA--HPYDFRSLRYVFAG--AEKVKE 921 (1140)
T ss_pred HHHHHHHHHcCCEEEEecC---cccHHHHHHHHHhcCCEEEEecH-HHHHHHHhhc--ccccccceeEEEEc--CCcCCH
Confidence 5568999999999999874 45678889999999999999986 4776665432 24567899999999 999999
Q ss_pred HHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC
Q psy14338 391 SSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM 470 (1761)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 470 (1761)
++.+.|.+.+ |.+ ++|.||+||++..++..... ..+..++|+|+
T Consensus 922 ~~~~~~~~~~---~~~---~~~~YG~TE~~~~~~~~~~~------------------------------~~~~~~vG~p~ 965 (1140)
T PRK06814 922 ETRQTWMEKF---GIR---ILEGYGVTETAPVIALNTPM------------------------------HNKAGTVGRLL 965 (1140)
T ss_pred HHHHHHHHHh---CCc---EEeccccccccceEEecCCC------------------------------CCCCCcCCccC
Confidence 9999999887 443 99999999998665433211 12356899999
Q ss_pred CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEE
Q psy14338 471 PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVF 550 (1761)
Q Consensus 471 ~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~ 550 (1761)
+|+++++.+.++ .|+.|||+|+|++++.||+|+++.+. +. + .++|||+|||+|++|+||+++
T Consensus 966 ~g~~~~~~~~~~------~~~~Gel~v~g~~~~~gY~~~~~~~~--~~--~--------~~~g~~~TGDl~~~d~dG~l~ 1027 (1140)
T PRK06814 966 PGIEYRLEPVPG------IDEGGRLFVRGPNVMLGYLRAENPGV--LE--P--------PADGWYDTGDIVTIDEEGFIT 1027 (1140)
T ss_pred CCCeEEEeecCC------CCCceEEEEeCCCcchhhcCCCCCCc--cc--c--------CCCCeEecCCEEEECCCCeEE
Confidence 999999987543 36789999999999999999875332 21 0 137899999999999999999
Q ss_pred EEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHH-HHHh
Q psy14338 551 VCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRV-LQAV 628 (1761)
Q Consensus 551 ~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~-Lp~y 628 (1761)
|+||.||+||++|+||+|.|||+.+.+++++ .+++|+++++. .++.+++++. ..+.+.+++++++++. ||.|
T Consensus 1028 ~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v-----~~~~vv~~~~~~~g~~~~~~~~-~~~~~~~~l~~~~~~~~l~~~ 1101 (1140)
T PRK06814 1028 IKGRAKRFAKIAGEMISLAAVEELAAELWPD-----ALHAAVSIPDARKGERIILLTT-ASDATRAAFLAHAKAAGASEL 1101 (1140)
T ss_pred EEecccCeeeeCCEEECHHHHHHHHHhcCCc-----ccEEEEEcccCCCCceEEEEEc-CCCcCHHHHHHHHHHcCCCcc
Confidence 9999999999999999999999999998888 68889988854 5677777654 4556788999999875 9999
Q ss_pred hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 629 DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 629 ~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
|+|..+ +.++++|+|+|||+||++|++...+
T Consensus 1102 ~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 1132 (1140)
T PRK06814 1102 MVPAEI-------ITIDEIPLLGTGKIDYVAVTKLAEE 1132 (1140)
T ss_pred cCCcEE-------EEecCcCCCCCCCCcHHHHHHHHHH
Confidence 999986 5569999999999999999987654
|
|
| >PRK07787 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-56 Score=567.28 Aligned_cols=451 Identities=21% Similarity=0.206 Sum_probs=376.7
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
+..|+++|+. .+++++||+||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|++|..
T Consensus 11 ~~~~~~~a~~-----~~~~~~Ty~el~~~~~~~a~~L~------~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~ 79 (471)
T PRK07787 11 AAADIADAVR-----IGGRVLSRSDLAGAATAVAERVA------GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDS 79 (471)
T ss_pred cccCCceEEE-----eCCcEEEHHHHHHHHHHHHHHhc------cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCC
Confidence 3569999999 67889999999999999999885 469999999999999999999999999999999987
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEecc
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSV 1338 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 1338 (1761)
|.+ ++.++++++++++++++.+.. .... ..+. + ...... ........+++++|++|||
T Consensus 80 ~~~------~l~~~l~~~~~~~il~~~~~~--~~~~---~~~~---~--~~~~~~------~~~~~~~~~~~~a~i~~TS 137 (471)
T PRK07787 80 GVA------ERRHILADSGAQAWLGPAPDD--PAGL---PHVP---V--RLHARS------WHRYPEPDPDAPALIVYTS 137 (471)
T ss_pred ChH------HHHHHHHhcCCCEEEecCCcc--cccc---ccee---e--eccccc------cccCCCCCCCceEEEEECC
Confidence 777 999999999999999976311 0000 0000 0 000000 0001224678999999999
Q ss_pred CCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHH
Q psy14338 1339 STTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418 (1761)
Q Consensus 1339 GSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i 1418 (1761)
||||.||||+++|+++...+......+++.++++++..++++|.+|+...++.++..|+++++.+. +++..+++.|
T Consensus 138 GTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i 213 (471)
T PRK07787 138 GTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR----PTPEAYAQAL 213 (471)
T ss_pred CCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC----CCHHHHHHHH
Confidence 999999999999999999998888899999999999999999999988889999999999998764 6899999999
Q ss_pred HhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccc
Q psy14338 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498 (1761)
Q Consensus 1419 ~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE 1498 (1761)
+ +++|++..+|+++..+++.. .....++++|.+++||+++++ .+.++|.+.++ ..+++.||+||
T Consensus 214 ~-~~~t~~~~~P~~~~~l~~~~--------~~~~~l~~l~~~~~gg~~~~~-~~~~~~~~~~~------~~~~~~YG~tE 277 (471)
T PRK07787 214 S-EGGTLYFGVPTVWSRIAADP--------EAARALRGARLLVSGSAALPV-PVFDRLAALTG------HRPVERYGMTE 277 (471)
T ss_pred h-hCceEEEcchHHHHHHHhCc--------cccccccceeEEEECCCCCCH-HHHHHHHHHcC------CCeecccCccc
Confidence 9 99999999999999987521 123457899999999999998 78788877653 46999999999
Q ss_pred cceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCC-CCc-ceEEEEcCC
Q psy14338 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCG-DSH-LGEIWVQSP 1576 (1761)
Q Consensus 1499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p-~G~-~GEL~i~g~ 1576 (1761)
++..+..... ......++|+|++|++++|+|++ +++++ .|. +|||+|+|+
T Consensus 278 ~~~~~~~~~~---------------------------~~~~~~~vG~~~~g~~~~i~d~~-~~~~~~~~~~~Gei~v~g~ 329 (471)
T PRK07787 278 TLITLSTRAD---------------------------GERRPGWVGLPLAGVETRLVDED-GGPVPHDGETVGELQVRGP 329 (471)
T ss_pred cCcceecCCC---------------------------CcccCCcccccCCCcEEEEECCC-CCCCCCCCCCceEEEEECc
Confidence 7643321110 00012359999999999999976 78887 454 899999999
Q ss_pred cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEccc-CCeEEeC
Q psy14338 1577 HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGAL-DETIMLR 1655 (1761)
Q Consensus 1577 ~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~-dd~Iki~ 1655 (1761)
++++||++ +|+.|.+.|. .++||+|||+|++ ++| |+ ++++||+ |++||++
T Consensus 330 ~~~~gy~~---~~~~t~~~~~--------~~~~~~TGDlg~~------~~d--------g~----l~~~GR~~d~~i~~~ 380 (471)
T PRK07787 330 TLFDGYLN---RPDATAAAFT--------ADGWFRTGDVAVV------DPD--------GM----HRIVGRESTDLIKSG 380 (471)
T ss_pred ccchhhcC---Chhhchhccc--------CCCceecCceEEE------cCC--------CC----EEEeCCCCceeEeeC
Confidence 99999999 9999999983 4689999999999 999 99 9999996 8999999
Q ss_pred CeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCc
Q psy14338 1656 GMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVV 1730 (1761)
Q Consensus 1656 G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~l 1730 (1761)
|+||+|.|||+ ++..+|.|.+++|++. ++.++++|+.. ...+.+++.++++++ |+ .|++|..+++++ +|
T Consensus 381 G~~v~~~eIE~-~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~-~~~~~~~l~~~l~~~-l~-~~~~P~~i~~~~--~i 454 (471)
T PRK07787 381 GYRIGAGEIET-ALLGHPGVREAAVVGVPDDDLGQRIVAYVVGA-DDVAADELIDFVAQQ-LS-VHKRPREVRFVD--AL 454 (471)
T ss_pred CEEECHHHHHH-HHHhCCCcceEEEEcccccccCeEEEEEEEeC-CCCCHHHHHHHHHhh-cc-cccCCcEEEEec--cC
Confidence 99999999999 8999999999999974 45788888863 345677899999987 88 899999999999 99
Q ss_pred cCCCchhhhHHHHHH
Q psy14338 1731 PINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1731 P~t~~GKvdR~~L~~ 1745 (1761)
|+|++||++|++|++
T Consensus 455 P~~~~GKi~r~~L~~ 469 (471)
T PRK07787 455 PRNAMGKVLKKQLLS 469 (471)
T ss_pred CCCCCccccHHHhcc
Confidence 999999999999975
|
|
| >PRK07798 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-56 Score=578.76 Aligned_cols=495 Identities=16% Similarity=0.170 Sum_probs=391.6
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
+|.++|+++++++|+++|+.+.+ +.+||+||+++++++|+.|. +.|+++|++|+|+++|+ ++++
T Consensus 4 ~l~~~~~~~a~~~p~~~a~~~~~------~~~ty~el~~~~~~la~~L~--------~~g~~~~~~v~v~~~n~--~~~~ 67 (533)
T PRK07798 4 NIADLFEAVADAVPDRVALVCGD------RRLTYAELEERANRLAHYLI--------AQGLGPGDHVGIYARNR--IEYV 67 (533)
T ss_pred cHHHHHHHHHHhCCCceEEEECC------ceeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHHH
Confidence 68899999999999999998854 68999999999999999999 88999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-----cceeccCCCccee----
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-----EVVAFKGWPKLTW---- 232 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---- 232 (1761)
+++|||+++|++++|+++.++.+ ++.++++++++++++++....+.+...... .++.+........
T Consensus 68 ~~~~a~~~~G~~~v~l~~~~~~~-----~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (533)
T PRK07798 68 EAMLGAFKARAVPVNVNYRYVED-----ELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGA 142 (533)
T ss_pred HHHHHHHhcCeEEEecCcCCCHH-----HHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCcc
Confidence 99999999999999999999976 899999999999999987654333221110 1111111100000
Q ss_pred -EEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH---------cCC------CCCC
Q psy14338 233 -FVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA---------CHY------TEGE 296 (1761)
Q Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~---------~~~------~~~d 296 (1761)
...+...... ...... ....+.++|+|||||||.||||+++|+++...+...... ..+ ..++
T Consensus 143 ~~~~~~~~~~~-~~~~~~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (533)
T PRK07798 143 VDYEDALAAGS-PERDFG-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGM 220 (533)
T ss_pred ccHHHHHhccC-CcCCCC-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCc
Confidence 0001111111 111111 123355799999999999999999999997655443221 112 5678
Q ss_pred eEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC-CCCCCCCc
Q psy14338 297 NMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD-HKDISLSS 375 (1761)
Q Consensus 297 ~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~-~~~~~l~~ 375 (1761)
+++..+|++|+.+++. ++.+|+.|+++++.+.. .+++..+++.++++++|++.++|+.+...++.... ....++++
T Consensus 221 ~~~~~~pl~~~~~~~~-~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~ 297 (533)
T PRK07798 221 RRFPAPPLMHGAGQWA-AFAALFSGQTVVLLPDV--RFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSS 297 (533)
T ss_pred eEEEecchhhhhhHHH-HHHHHhcCceEEEecCC--CcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCc
Confidence 9999999999999994 99999999999999843 57899999999999999999987543333333221 22456789
Q ss_pred eeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCC
Q psy14338 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQE 455 (1761)
Q Consensus 376 Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 455 (1761)
+|.+++| |+++++++.++|.+.++. . .++|.||+||++.+++.....
T Consensus 298 l~~i~~g--G~~~~~~~~~~~~~~~~~--~---~~~~~YG~tE~~~~~~~~~~~-------------------------- 344 (533)
T PRK07798 298 LFAIASG--GALFSPSVKEALLELLPN--V---VLTDSIGSSETGFGGSGTVAK-------------------------- 344 (533)
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHcCC--C---eEEeeecccccccccccCCCC--------------------------
Confidence 9999999 999999999999988742 2 499999999996544322100
Q ss_pred CccCcccccccC--CCCCCcEEEEEeCCCCcccCCCCCc--eEEEEecCCccccccCCCccccccccccccccCCCccCC
Q psy14338 456 NSLTSLTLQDCG--QVMPGCIMTVVKMDSPSYLCKTDEV--GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQ 531 (1761)
Q Consensus 456 ~~~~~~~~~~iG--~p~~~~~~~I~d~~~~~~~~p~G~~--GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~ 531 (1761)
...+.| ++.++..++|+|++++ +++.|+. |||+. |+.++.||+++|+.|+++|... ++
T Consensus 345 ------~~~~~g~~~~~~~~~~~i~~~~~~--~~~~g~~~~g~l~~-~~~~~~gy~~~~~~t~~~f~~~---------~~ 406 (533)
T PRK07798 345 ------GAVHTGGPRFTIGPRTVVLDEDGN--PVEPGSGEIGWIAR-RGHIPLGYYKDPEKTAETFPTI---------DG 406 (533)
T ss_pred ------CCccCCCCccCCCceEEEECCCCC--CCCCCCCCeeEEEe-ecCccccccCChhhhHHhhccC---------CC
Confidence 012234 7889999999999987 5888988 77765 5579999999999999999632 23
Q ss_pred CceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC
Q psy14338 532 DTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP 610 (1761)
Q Consensus 532 ~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~ 610 (1761)
.+||+|||+|++++||+++++||+|++||++|++|+|.|||+.+.+++.+ .+++|++.++. .++.++++++..+
T Consensus 407 ~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~ 481 (533)
T PRK07798 407 VRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDV-----ADALVVGVPDERWGQEVVAVVQLRE 481 (533)
T ss_pred CceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccc-----eeEEEEeccCcccCceEEEEEEECC
Confidence 68999999999999999999999999999999999999999999988887 79999988743 5778888888765
Q ss_pred C--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 611 D--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 611 ~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+ .+.++++++++++|+.|++|..+ +.++++|+|++||+||+.|+++..
T Consensus 482 ~~~~~~~~l~~~l~~~l~~~~~P~~i-------~~~~~iP~t~~GK~~~~~~~~~~~ 531 (533)
T PRK07798 482 GARPDLAELRAHCRSSLAGYKVPRAI-------WFVDEVQRSPAGKADYRWAKEQAA 531 (533)
T ss_pred CCCCCHHHHHHHHhhhcccCCCCeEE-------EEcccCCCCCcchhhHHHHhhhhc
Confidence 4 57899999999999999999986 557999999999999999998764
|
|
| >PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-56 Score=575.87 Aligned_cols=489 Identities=14% Similarity=0.166 Sum_probs=387.6
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++++.|.+.+. ++|+++|+.+.+...+.+.+||+||.++++++|+.|.+. |+++||+|+++++|+.++++++||
T Consensus 8 ~l~~~~~~~a~-----~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~-g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 8 HLRQMWDDLAD-----VYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSL-GIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred cHHHHHHHHHH-----HCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHH
Confidence 45666666654 779999998765444558999999999999999999998 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc------ccc-ccc---CCccccCCC
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN------VVD-IKS---WPTILDTDD 1313 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~------~~~-~~~---~~~~~~~~~ 1313 (1761)
|+++|++++|++|.++.+ ++.++++++++++++++.+....+.+..... .+. ... .........
T Consensus 82 ~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (517)
T PRK08008 82 LAKIGAIMVPINARLLRE------ESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQ 155 (517)
T ss_pred HHHcCeEEEEcCcccCHH------HHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHH
Confidence 999999999999987776 9999999999999999987665544321110 000 000 000000000
Q ss_pred Cc--cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1314 MP--KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1314 ~~--~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
.. ............++++++|+|||||||.||||+++|+++............+.++++++.+.|++|..+....++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 235 (517)
T PRK08008 156 LKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMA 235 (517)
T ss_pred HhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHH
Confidence 00 0000011123456899999999999999999999999998765444444567788888888888888777677889
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
++..|+++++.+. +++..+++.|+++++|++.++|++++.++... ........+++.+++++ +++. .
T Consensus 236 ~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~l~~~~~~~-~~~~-~ 302 (517)
T PRK08008 236 AFSAGATFVLLEK----YSARAFWGQVCKYRATITECIPMMIRTLMVQP-------PSANDRQHCLREVMFYL-NLSD-Q 302 (517)
T ss_pred HHhcCcEEEEccc----cCHHHHHHHHHHcCCcEEechHHHHHHHHhCC-------CccccccccceeeEEec-CCCH-H
Confidence 9999999999874 68999999999999999999999998886531 11122345788877765 6776 6
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+..+|.+.++ ..+++.||+||++..+...... . .....++|+|++|++
T Consensus 303 ~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~~-~-------------------------~~~~~~~G~~~~g~~ 350 (517)
T PRK08008 303 EKDAFEERFG------VRLLTSYGMTETIVGIIGDRPG-D-------------------------KRRWPSIGRPGFCYE 350 (517)
T ss_pred HHHHHHHHhC------CeEEeeccccccccccccCCcc-c-------------------------cccCCccccCCCCcE
Confidence 6667766653 5799999999986544322110 0 001235999999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcC---CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQS---PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g---~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
++|+|++ +++++.|+.|||+|+| +++++|||+ +|+.|++.| ..+|||+|||+|++ |+|
T Consensus 351 ~~i~d~~-~~~~~~g~~Gel~v~g~~~~~~~~gy~~---~~~~~~~~~--------~~~g~~~TGDl~~~------~~~- 411 (517)
T PRK08008 351 AEIRDDH-NRPLPAGEIGEICIKGVPGKTIFKEYYL---DPKATAKVL--------EADGWLHTGDTGYV------DEE- 411 (517)
T ss_pred EEEECCC-CCCCCCCCcceEEEeCCCCcchhhhHhC---ChHHHhhcc--------cCCCCeeccceEEE------CCC-
Confidence 9999954 8999999999999998 699999999 999999999 35789999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCC-CchhHhh
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDG-NESEALD 1702 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~-~~~~~~~ 1702 (1761)
|+ ++|+||+||+||++|+||+|.|||+ ++..||.|.+|+|++.. +.+.++|++.. ...+.++
T Consensus 412 -------g~----~~~~GR~~d~i~~~G~~i~p~~iE~-~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~~~~~~ 479 (517)
T PRK08008 412 -------GF----FYFVDRRCNMIKRGGENVSCVELEN-IIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEE 479 (517)
T ss_pred -------Cc----EEEeecccceEEeCCEEECHHHHHH-HHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCCCCHHH
Confidence 99 9999999999999999999999999 89999999999999853 46888888743 3455678
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHH
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 1744 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~ 1744 (1761)
++++++++ |+ .|++|..+++++ +||+|++||++|+.|+
T Consensus 480 l~~~~~~~-l~-~~~~P~~~~~v~--~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 480 FFAFCEQN-MA-KFKVPSYLEIRK--DLPRNCSGKIIKKNLK 517 (517)
T ss_pred HHHHHHhh-cc-cccCCcEEEEec--cCCCCCccceehhhcC
Confidence 99999987 88 899999999999 9999999999999874
|
|
| >PLN02479 acetate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-56 Score=579.42 Aligned_cols=503 Identities=16% Similarity=0.162 Sum_probs=383.5
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++...|.+.+..+|+++|+.+.+ +.+||+||+++++++|..|. +.|+++||+|+++++|+ +++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~~------~~~ty~eL~~~~~~lA~~L~--------~~g~~~gd~V~i~~~n~--~~~ 83 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHGS------VRYTWAQTYQRCRRLASALA--------KRSIGPGSTVAVIAPNI--PAM 83 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEECC------ceeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCc--HHH
Confidence 357888999999999999998744 58999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc------------cccceeccCCC
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA------------AGEVVAFKGWP 228 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~------------~~~~~~~~~~~ 228 (1761)
++++|||+++|++++|++|.++.+ ++.+++++++++++|+++...+...... ...++.+....
T Consensus 84 ~~~~la~~~~G~v~v~l~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (567)
T PLN02479 84 YEAHFGVPMAGAVVNCVNIRLNAP-----TIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPT 158 (567)
T ss_pred HHHHHHHHhCCcEEEEeccccCHH-----HHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCc
Confidence 999999999999999999999876 8999999999999999876543221100 00011111000
Q ss_pred c-c-e--------eE-EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCe
Q psy14338 229 K-L-T--------WF-VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGEN 297 (1761)
Q Consensus 229 ~-~-~--------~~-~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~ 297 (1761)
. . . .. ..+.+..............+++.++++|||||||.||||+++|+++..........+++.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~ 238 (567)
T PLN02479 159 CDPKSLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAV 238 (567)
T ss_pred CCccccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCE
Confidence 0 0 0 00 0000011000000011223457889999999999999999999998776666666788899999
Q ss_pred EEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCC-CCCCce
Q psy14338 298 MVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKD-ISLSSL 376 (1761)
Q Consensus 298 ~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~-~~l~~L 376 (1761)
++..+|++|..++...++.++..|.++ +.. .+++..+++.++++++|++..+| +++..++....... ..++++
T Consensus 239 ~~~~~p~~h~~~~~~~~~~~~~~g~~~-~~~----~~~~~~~~~~l~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~~l 312 (567)
T PLN02479 239 YLWTLPMFHCNGWCFTWTLAALCGTNI-CLR----QVTAKAIYSAIANYGVTHFCAAP-VVLNTIVNAPKSETILPLPRV 312 (567)
T ss_pred EEEecchhhhhhHHHHHHHHhhcCceE-ecc----CCCHHHHHHHHHHcCCeEEEecH-HHHHHHHhhhhhcccccccce
Confidence 999999999988765333445555554 444 57899999999999999999996 47777765433222 256899
Q ss_pred eEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCC
Q psy14338 377 RLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQEN 456 (1761)
Q Consensus 377 r~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 456 (1761)
|.+++| |+++++.+.++|.+. |.+ +++.||+||++..++......... .. ...
T Consensus 313 ~~~~~~--G~~~~~~~~~~~~~~----~~~---~~~~yG~tE~~~~~~~~~~~~~~~---------------~~---~~~ 365 (567)
T PLN02479 313 VHVMTA--GAAPPPSVLFAMSEK----GFR---VTHTYGLSETYGPSTVCAWKPEWD---------------SL---PPE 365 (567)
T ss_pred eEEEEc--CCCCCHHHHHHHHhc----CCc---eecccccccccccccceecccccc---------------cc---Ccc
Confidence 999999 999999999988764 443 999999999854332111000000 00 000
Q ss_pred ccCcccccccCCCCCCcE-EEEEeCC-CCcccCCCC--CceEEEEecCCccccccCCCccccccccccccccCCCccCCC
Q psy14338 457 SLTSLTLQDCGQVMPGCI-MTVVKMD-SPSYLCKTD--EVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQD 532 (1761)
Q Consensus 457 ~~~~~~~~~iG~p~~~~~-~~I~d~~-~~~~~~p~G--~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~ 532 (1761)
........+|.|.+|+. ++|+|++ +. ++|.+ ++|||+++|+++++|||++|+.|+++|. +
T Consensus 366 -~~~~~~~~~g~~~~g~~~~~i~d~~~~~--~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~-------------~ 429 (567)
T PLN02479 366 -EQARLNARQGVRYIGLEGLDVVDTKTMK--PVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFA-------------N 429 (567)
T ss_pred -cccccccccCCCcCCcCceeEEcCCCCc--ccCCCCCCceEEEEeccchhhhhhcCcccccchhc-------------C
Confidence 00011235788888876 8999954 44 46654 6899999999999999999999999995 6
Q ss_pred ceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC
Q psy14338 533 TYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD 611 (1761)
Q Consensus 533 ~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~ 611 (1761)
+||||||+|++++||+++|+||.||+||++|+||+|.|||++|..++.+ .+++|++.++ ..++.+++++++..+
T Consensus 430 g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~ 504 (567)
T PLN02479 430 GWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAV-----LEASVVARPDERWGESPCAFVTLKPG 504 (567)
T ss_pred CceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCccc-----ceeeEEeccchhcCceeEEEEEecCc
Confidence 8999999999999999999999999999999999999999999988877 7999999874 356789999987654
Q ss_pred C-------CHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 612 C-------SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 612 ~-------~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
. ..++++++++++||.|++|..+ + +++||+|++||++|++|++.+..
T Consensus 505 ~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~-------~-~~~iP~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 505 VDKSDEAALAEDIMKFCRERLPAYWVPKSV-------V-FGPLPKTATGKIQKHVLRAKAKE 558 (567)
T ss_pred ccccchhhhHHHHHHHHHhhcccccCCceE-------E-eccCCCCCccCeeHHHHHHHHHh
Confidence 2 3468899999999999999985 2 26799999999999999987654
|
|
| >PRK07786 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-56 Score=576.61 Aligned_cols=478 Identities=18% Similarity=0.209 Sum_probs=389.1
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
.++|+++|+. ..++.+||.||.++++++|++|.+. |+++|++|+|+++|+++++++++||+++|++++|++|..
T Consensus 28 ~~~~~~~a~~-----~~~~~~ty~~l~~~~~~~a~~L~~~-g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~vpl~~~~ 101 (542)
T PRK07786 28 LMQPDAPALR-----FLGNTTTWRELDDRVAALAGALSRR-GVGFGDRVLILMLNRTEFVESVLAANMLGAIAVPVNFRL 101 (542)
T ss_pred HHCCCCeEEE-----eCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEEcCccC
Confidence 3679999999 6678999999999999999999998 999999999999999999999999999999999999877
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----ccccc--------ccCCccccCCCCccchhhhccCC
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDI--------KSWPTILDTDDMPKKKLAALYRA 1325 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 1325 (1761)
+.+ ++..+++++++++++++......+...... ..+.. ..+.++.... ........
T Consensus 102 ~~~------~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 170 (542)
T PRK07786 102 TPP------EIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEA-----GPAHAPVD 170 (542)
T ss_pred CHH------HHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhcc-----CCCCCCCC
Confidence 766 999999999999999997765544322110 00000 0011100000 00011123
Q ss_pred CCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCc-CCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCC
Q psy14338 1326 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL-YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 1404 (1761)
Q Consensus 1326 ~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~ 1404 (1761)
...+++++++|||||||.||||+++|+++.+.+......+++ ..+++++...+++|.+|+ ..++.++..|+++++.+.
T Consensus 171 ~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~ 249 (542)
T PRK07786 171 IPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGI-GSMLPGLLLGAPTVIYPL 249 (542)
T ss_pred CCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHH-HHHHHHHHccCEEEEccC
Confidence 455789999999999999999999999999988888888887 456666777777776666 678999999999999763
Q ss_pred CccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCC
Q psy14338 1405 SEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALG 1484 (1761)
Q Consensus 1405 ~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g 1484 (1761)
. .++|..+++.|+++++|+++++|+++..++.... ... ...+||.+++||+++++ .+.+++.+.++.
T Consensus 250 ~--~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~-------~~~-~~~~lr~i~~gg~~~~~-~~~~~~~~~~~~-- 316 (542)
T PRK07786 250 G--AFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQ-------ARP-RDLALRVLSWGAAPASD-TLLRQMAATFPE-- 316 (542)
T ss_pred C--CcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcc-------cCc-cCcceEEEEECCCCCCH-HHHHHHHHHcCC--
Confidence 2 3689999999999999999999999999976421 111 22369999999999998 788888887642
Q ss_pred CCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCC
Q psy14338 1485 LSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCG 1564 (1761)
Q Consensus 1485 ~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p 1564 (1761)
..+++.||+||++.++...... .......++|+|++|+.++|+|++ ++++|
T Consensus 317 ---~~l~~~YG~tE~~~~~~~~~~~-------------------------~~~~~~~~~G~~~~~~~~~i~d~~-~~~~~ 367 (542)
T PRK07786 317 ---AQILAAFGQTEMSPVTCMLLGE-------------------------DAIRKLGSVGKVIPTVAARVVDEN-MNDVP 367 (542)
T ss_pred ---CeEEeeecccccccceEecCcc-------------------------cccccCCCccccCCCceEEEECCC-CCCCc
Confidence 6799999999986543321110 000122459999999999999965 79999
Q ss_pred CCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEE
Q psy14338 1565 DSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFV 1644 (1761)
Q Consensus 1565 ~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~ 1644 (1761)
.|++|||+++|+.+++||++ +++.|.+.| .++||+|||++++ ++| |. +++
T Consensus 368 ~g~~Gel~v~g~~~~~gy~~---~~~~~~~~f---------~~~~~~TGDl~~~------~~~--------g~----~~i 417 (542)
T PRK07786 368 VGEVGEIVYRAPTLMSGYWN---NPEATAEAF---------AGGWFHSGDLVRQ------DEE--------GY----VWV 417 (542)
T ss_pred CCCceEEEEEChhhhhhhcC---CHHHHHHHh---------hCCcccccceEEE------cCC--------ce----EEE
Confidence 99999999999999999999 999999998 3589999999999 899 99 999
Q ss_pred EcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC--chhHhhHHHHHHHHHhhhcCc
Q psy14338 1645 VGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN--ESEALDLVPLVTNAVLEEHHL 1717 (1761)
Q Consensus 1645 ~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~--~~~~~~l~~~l~~~~Lp~~~~ 1717 (1761)
+||.||+||++|.+|+|.|||+ ++.+||+|.+|+|++. ++.++++++.... ....++++++++++ ++ .|+
T Consensus 418 ~GR~~d~i~~~G~~v~~~eiE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~-l~-~~~ 494 (542)
T PRK07786 418 VDRKKDMIISGGENIYCAEVEN-VLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAALTLEDLAEFLTDR-LA-RYK 494 (542)
T ss_pred EecccceEEeCCEEECHHHHHH-HHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCCCCHHHHHHHHHhh-cc-CCC
Confidence 9999999999999999999999 8999999999999974 3567777776432 24567899999987 88 999
Q ss_pred eeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1718 IVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1718 vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
+|..+++++ +||+|++||++|++|++.+.+..
T Consensus 495 ~P~~i~~v~--~iP~t~~GKv~r~~L~~~~~~~~ 526 (542)
T PRK07786 495 HPKALEIVD--ALPRNPAGKVLKTELRERYGACV 526 (542)
T ss_pred CCCEEEEec--cCCCCCcccccHHHHHHHHHhhh
Confidence 999999999 99999999999999999986654
|
|
| >TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-55 Score=573.73 Aligned_cols=477 Identities=20% Similarity=0.249 Sum_probs=391.8
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
.++|+++|+. +.++.+||+||.++++++|+.|++. |+++|++|+++++|++++++++|||+++|++++|+++..
T Consensus 11 ~~~p~~~a~~-----~~~~~~ty~~l~~~v~~~a~~l~~~-g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 84 (515)
T TIGR03098 11 ARLPDATALV-----HHDRTLTYAALSERVLALASGLRGL-GLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINPLL 84 (515)
T ss_pred HHCCCCeEEE-----ECCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCCCC
Confidence 3679999999 5667999999999999999999998 999999999999999999999999999999999999877
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----cccccc-------------cCCccccCCCCccchhh
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIK-------------SWPTILDTDDMPKKKLA 1320 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~-------------~~~~~~~~~~~~~~~~~ 1320 (1761)
+.+ ++..+++++++++++++......+...... ..+... .|....... ..
T Consensus 85 ~~~------~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 152 (515)
T TIGR03098 85 KAE------QVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALG------DA 152 (515)
T ss_pred CHH------HHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhccc------cc
Confidence 666 999999999999999987655443222111 000000 011110000 00
Q ss_pred hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEE
Q psy14338 1321 ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSI 1400 (1761)
Q Consensus 1321 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~v 1400 (1761)
........+++++|+|||||||.||||+++|+++...+......+++.++|+++.+.+++|.+++ ..++.++..|++++
T Consensus 153 ~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~ 231 (515)
T TIGR03098 153 DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGF-NQLTTAFYVGATVV 231 (515)
T ss_pred cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHH-HHHHHHHHcCCEEE
Confidence 01123356789999999999999999999999999999888888899999999999999998887 56899999999999
Q ss_pred EeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHH
Q psy14338 1401 LIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLF 1480 (1761)
Q Consensus 1401 l~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~ 1480 (1761)
+.+. +++..+++.++++++|++.++|+++..+.+. .....+++++|.+++||+++++ .+.+.+.+.+
T Consensus 232 ~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------~~~~~~~~~l~~~~~~g~~l~~-~~~~~~~~~~ 298 (515)
T TIGR03098 232 LHDY----LLPRDVLKALEKHGITGLAAVPPLWAQLAQL--------DWPESAAPSLRYLTNSGGAMPR-ATLSRLRSFL 298 (515)
T ss_pred EcCC----CCHHHHHHHHHHcCCceEecChHHHHHHHhc--------ccCCCCccceEEEEecCCcCCH-HHHHHHHHHC
Confidence 8874 6899999999999999999999999998652 1122467899999999999998 8888888776
Q ss_pred hhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCC
Q psy14338 1481 SALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETK 1560 (1761)
Q Consensus 1481 ~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~ 1560 (1761)
+. ..+++.||+||++..+.... .. ...+..++|+|++|++++|+|++ +
T Consensus 299 ~~-----~~~~~~YG~tE~~~~~~~~~------------~~--------------~~~~~~~vG~~~~~~~~~i~~~~-~ 346 (515)
T TIGR03098 299 PN-----ARLFLMYGLTEAFRSTYLPP------------EE--------------VDRRPDSIGKAIPNAEVLVLRED-G 346 (515)
T ss_pred CC-----CeEeeeeccccccceEeccc------------cc--------------ccCCCCCcceecCCCEEEEECCC-C
Confidence 42 57999999999753321110 00 00123469999999999999955 8
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhccc---CCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCc
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVT---GNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSK 1637 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~---~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~ 1637 (1761)
++++.|+.|||+++|+.++.||++ +++.|++.|..++.. -..+.+||+|||+|++ ++| |+
T Consensus 347 ~~~~~~~~Gel~v~g~~~~~gy~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~------~~~--------g~ 409 (515)
T TIGR03098 347 SECAPGEEGELVHRGALVAMGYWN---DPEKTAERFRPLPPRPGELHLPELAVWSGDTVRR------DEE--------GF 409 (515)
T ss_pred CCCCCCCceEEEEcCchhhccccC---CchhhhhhhhccCCccccccccccceeccceEEE------cCC--------ce
Confidence 899999999999999999999999 999999999765431 1123579999999999 999 99
Q ss_pred ccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEe-----eCCeEEEEEEe-CCCchhHhhHHHHHHHHH
Q psy14338 1638 LHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFT-----WTNLLVVVVEL-DGNESEALDLVPLVTNAV 1711 (1761)
Q Consensus 1638 ~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~-----~~~~~~a~v~~-~~~~~~~~~l~~~l~~~~ 1711 (1761)
+++.||.||+||++|.+|+|.|||+ ++..||.|.+|+|++ .++.++++++. .+...+..+++++++++
T Consensus 410 ----l~~~GR~~d~i~~~G~~v~~~eiE~-~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~- 483 (515)
T TIGR03098 410 ----LYFVGRRDEMIKTSGYRVSPTEVEE-VAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEELDRAALLAECRAR- 483 (515)
T ss_pred ----EEEEeccccceecCCEEeCHHHHHH-HHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCCCCCHHHHHHHHHhh-
Confidence 9999999999999999999999999 899999999999997 35678888775 33455678999999997
Q ss_pred hhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1712 LEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1712 Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
|+ .||+|..+++++ +||+|++||++|++|++
T Consensus 484 l~-~~~~p~~i~~v~--~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 484 LP-NYMVPALIHVRQ--ALPRNANGKIDRKALAA 514 (515)
T ss_pred Cc-cccCCCEEEEec--cCCCCCCCCCcHHHhcc
Confidence 88 899999999999 99999999999999974
|
This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present. |
| >PLN02387 long-chain-fatty-acid-CoA ligase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-56 Score=593.99 Aligned_cols=519 Identities=14% Similarity=0.127 Sum_probs=375.6
Q ss_pred cccccccccccCCCCcCCCCCCCceEEc-----------cCC-------CCceeeCHHHHHHHHHHHHHHHHhhcCCCCC
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSV-----------DTR-------SAAQLLTCSQLHKRAERVGALLLERAKINTG 1224 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~-----------d~~-------~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~g 1224 (1761)
.++.+.|.+.+. ++||++|+... ++. .+.+.+||+||+++++++|+.|.+. |+++|
T Consensus 58 ~t~~~l~~~~~~-----~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~l-G~~~g 131 (696)
T PLN02387 58 TTLAALFEQSCK-----KYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVAL-GHNKE 131 (696)
T ss_pred CCHHHHHHHHHH-----HCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHh-CCCCC
Confidence 356666666654 77999999531 110 1123489999999999999999999 99999
Q ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----cc
Q psy14338 1225 DHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NV 1299 (1761)
Q Consensus 1225 d~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~ 1299 (1761)
|+|+|+++|++||++++|||+++|+++|||++.++.+ ++.+++++++++++|++.+....+...... .+
T Consensus 132 d~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~------~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~i 205 (696)
T PLN02387 132 ERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEE------ALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRV 205 (696)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHH------HHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEE
Confidence 9999999999999999999999999999998877776 999999999999999998766554432211 01
Q ss_pred cccccCCccc-----cCCC--------Ccc--chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHH
Q psy14338 1300 VDIKSWPTIL-----DTDD--------MPK--KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA 1364 (1761)
Q Consensus 1300 ~~~~~~~~~~-----~~~~--------~~~--~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~ 1364 (1761)
+......... .... ... ...........++|+++|+|||||||+||||++||+|++..+......
T Consensus 206 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~ 285 (696)
T PLN02387 206 IYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTV 285 (696)
T ss_pred EEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhh
Confidence 1110000000 0000 000 000011123468999999999999999999999999999988877665
Q ss_pred c-CcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccc--cC--HHHHHHHHHhcCceEeecchHHHHHHHhh
Q psy14338 1365 C-ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE--VN--PALWLSAVSQYRVRDTFCSYGVMELCTKG 1439 (1761)
Q Consensus 1365 ~-~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~--~~--~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~ 1439 (1761)
+ ++.++|+++.++|++|.++... .+..+..|+++.+.....+. ++ +..+++.++++++|++.++|++++.+.+.
T Consensus 286 ~~~~~~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~ 364 (696)
T PLN02387 286 VPKLGKNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDG 364 (696)
T ss_pred cCCCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHH
Confidence 4 6788899999999999888754 34456777777664431110 00 23456789999999999999999998754
Q ss_pred hcCCcchh-----------------hccC-----------------------CCCCcceEEEeecCCCChHHHHHHHHHH
Q psy14338 1440 LSGSIPQL-----------------KARN-----------------------IALGCVRTCVVVAEERPRIHLTSAFSKL 1479 (1761)
Q Consensus 1440 ~~~~~~~~-----------------~~~~-----------------------~~l~~Lr~v~~gGe~l~~~~l~~~~~~~ 1479 (1761)
........ .... ...++||.+++||+++++ ++.+.+...
T Consensus 365 ~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~-~~~~~~~~~ 443 (696)
T PLN02387 365 VRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSG-DTQRFINIC 443 (696)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCH-HHHHHHHHH
Confidence 21110000 0000 001589999999999999 675555544
Q ss_pred HhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcC-C
Q psy14338 1480 FSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP-E 1558 (1761)
Q Consensus 1480 ~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~-~ 1558 (1761)
++ +.+++.||+||++..++.... .....+++|+|+++++++|+|. +
T Consensus 444 ~g------~~v~~~YG~TEt~~~~~~~~~---------------------------~~~~~gsvG~p~p~~evkivd~~~ 490 (696)
T PLN02387 444 LG------APIGQGYGLTETCAGATFSEW---------------------------DDTSVGRVGPPLPCCYVKLVSWEE 490 (696)
T ss_pred cC------CCeeEeechhhcccceeecCc---------------------------ccCCCCccCCCCCceEEEEeeccc
Confidence 43 569999999998654332110 0011346999999999999994 4
Q ss_pred CCCCC--CCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCC
Q psy14338 1559 TKGQC--GDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVS 1636 (1761)
Q Consensus 1559 ~~~~~--p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G 1636 (1761)
.+..+ .++..|||+|+||+++.|||+ +|+.|+++|..++ ++.|||+|||+|++ |+| |
T Consensus 491 ~~~~~~~~~~p~GEi~vrGp~v~~GY~~---~pe~T~~~f~~d~----~G~~W~~TGDig~~------d~d--------G 549 (696)
T PLN02387 491 GGYLISDKPMPRGEIVIGGPSVTLGYFK---NQEKTDEVYKVDE----RGMRWFYTGDIGQF------HPD--------G 549 (696)
T ss_pred cCcccCCCCCCCceEEeccCcccchhcC---CHHHHhhhhcccc----CCCceeecCceEEE------CCC--------C
Confidence 33222 344579999999999999999 9999999995321 34569999999999 999 9
Q ss_pred cccceEEEEcccCCeEEe-CCeecChHHHHHHHHHhccCcceeEEEeeC--CeEEEEEEeCCCch---------------
Q psy14338 1637 KLHDAVFVVGALDETIML-RGMRYHPIDIENSVMRAHKKIAECAVFTWT--NLLVVVVELDGNES--------------- 1698 (1761)
Q Consensus 1637 ~~~~~l~~~GR~dd~Iki-~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~--~~~~a~v~~~~~~~--------------- 1698 (1761)
+ |+|+||+||+||+ +|++|+|.|||+ +|.+||.|.+|+|++.+ ..++|+|+++....
T Consensus 550 ~----l~i~gR~kd~ik~~~Ge~I~p~eIE~-~l~~~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~ 624 (696)
T PLN02387 550 C----LEIIDRKKDIVKLQHGEYVSLGKVEA-ALSVSPYVDNIMVHADPFHSYCVALVVPSQQALEKWAKKAGIDYSNFA 624 (696)
T ss_pred c----EEEEEcccceEECCCCeEEchHHHHH-HHhcCCCeeEEEEEecCCcceEEEEEEeCHHHHHHHHHHcCCCCCCHH
Confidence 9 9999999999998 599999999999 89999999999999875 46788887642111
Q ss_pred -------hHhhHHHHH----HHHHhhhcCceeeEEEEECCCCc-----cCCCchhhhHHHHHHHHHcCCCChhhh
Q psy14338 1699 -------EALDLVPLV----TNAVLEEHHLIVGVAVVVDPGVV-----PINSRGEKQRMHLRDGFLADQLDPIYV 1757 (1761)
Q Consensus 1699 -------~~~~l~~~l----~~~~Lp~~~~vP~~i~~v~~~~l-----P~t~~GKvdR~~L~~~~~~~~~~~~~~ 1757 (1761)
..+++.+.+ ++..|+ .|.+|+.|.++++ .+ -+|++.|+.|+.+.+.| +.+++++|.
T Consensus 625 ~~~~~~~~~~~i~~~~~~~~~~~~l~-~~e~~~~i~l~~~-~~t~~~g~lT~t~K~~R~~i~~~y-~~~i~~ly~ 696 (696)
T PLN02387 625 ELCEKEEAVKEVQQSLSKAAKAARLE-KFEIPAKIKLLPE-PWTPESGLVTAALKLKREQIRKKF-KDDLKKLYE 696 (696)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcCCC-CcceeeEEEEECC-CCCCCCCcCChhhhhhhHHHHHHH-HHHHHHHhC
Confidence 011122222 222376 8999999999872 23 26899999999999999 567787773
|
|
| >PTZ00216 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-56 Score=597.37 Aligned_cols=507 Identities=14% Similarity=0.155 Sum_probs=370.7
Q ss_pred cccccccccccCCCCcCCCCCCCceEEcc-------------CC---------CCceeeCHHHHHHHHHHHHHHHHhhcC
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVD-------------TR---------SAAQLLTCSQLHKRAERVGALLLERAK 1220 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d-------------~~---------~~~~~lTY~eL~~~a~~lA~~L~~~~G 1220 (1761)
.++++.|..++. ++||++|+.+.+ +. ++.+.+||+||.++++++|+.|.+. |
T Consensus 69 ~t~~~~~~~~~~-----~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~-G 142 (700)
T PTZ00216 69 PNFLQRLERICK-----ERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAEL-G 142 (700)
T ss_pred CCHHHHHHHHHH-----hCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHh-C
Confidence 467788887775 779999998742 10 1468999999999999999999999 9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhc-----
Q psy14338 1221 INTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKE----- 1295 (1761)
Q Consensus 1221 v~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~----- 1295 (1761)
+++||+|+|+++|+++|++++|||+++|+++||+++.++.+ ++++++++++++++|++......+....
T Consensus 143 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~------~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~ 216 (700)
T PTZ00216 143 LTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGED------ALAYALRETECKAIVCNGKNVPNLLRLMKSGGM 216 (700)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHH------HHHhhhhccCccEEEECHHHHHHHHHhhhhccC
Confidence 99999999999999999999999999999999999987766 9999999999999999876544332111
Q ss_pred -cccccccccC--------------CccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHH
Q psy14338 1296 -ASNVVDIKSW--------------PTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRS 1360 (1761)
Q Consensus 1296 -~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~ 1360 (1761)
...++..... ..+..... .............++++|||+|||||||.||||+++|+|+++.+.+
T Consensus 217 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~ 295 (700)
T PTZ00216 217 PNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGH-SAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILA 295 (700)
T ss_pred CceEEEEECCCccccccCCceEEEHHHHHHhCC-ccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHH
Confidence 0011111110 00000000 0000011123346899999999999999999999999999998887
Q ss_pred HHHHc----C-cCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHH-------HHHhcCceEeec
Q psy14338 1361 MKLAC----E-LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLS-------AVSQYRVRDTFC 1428 (1761)
Q Consensus 1361 ~~~~~----~-~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~-------~i~~~~vt~~~~ 1428 (1761)
....+ + +.++|+++.++|++|.++... ....+..|+++++. ++..+.+ .|+++++|++.+
T Consensus 296 ~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~-------~~~~l~~~~~~~~~~l~~~~pT~~~~ 367 (700)
T PTZ00216 296 LEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG-------SPRTLTDTFARPHGDLTEFRPVFLIG 367 (700)
T ss_pred HHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC-------CHHHhhhhhccccchHHHcCCcEEEe
Confidence 76554 2 367788899999998887643 34456777776653 2344444 688999999999
Q ss_pred chHHHHHHHhhhcCCcchh------------------hccCC----------------CCCcceEEEeecCCCChHHHHH
Q psy14338 1429 SYGVMELCTKGLSGSIPQL------------------KARNI----------------ALGCVRTCVVVAEERPRIHLTS 1474 (1761)
Q Consensus 1429 ~Ps~~~~l~~~~~~~~~~~------------------~~~~~----------------~l~~Lr~v~~gGe~l~~~~l~~ 1474 (1761)
+|++++.+.+......... ..... ..++||.+++||+++++ ++.+
T Consensus 368 vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~-~~~~ 446 (700)
T PTZ00216 368 VPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSA-ATQE 446 (700)
T ss_pred chHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCH-HHHH
Confidence 9999998865322110000 00000 01579999999999999 6766
Q ss_pred HHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEE
Q psy14338 1475 AFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVII 1554 (1761)
Q Consensus 1475 ~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v 1554 (1761)
+++..+. .+++.||+||++..+..... .....+++|+|++|++++|
T Consensus 447 ~~~~~~~-------~l~~~YG~TEt~~~~~~~~~---------------------------~~~~~~svG~p~~g~evkI 492 (700)
T PTZ00216 447 FVNVVFG-------MVIQGWGLTETVCCGGIQRT---------------------------GDLEPNAVGQLLKGVEMKL 492 (700)
T ss_pred HHHHHhh-------hHhhccCcccccccccccCC---------------------------CCCCCCCcCCcCCCeEEEE
Confidence 6555431 58999999998654322110 0112356999999999999
Q ss_pred EcCCC-CCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCC
Q psy14338 1555 ANPET-KGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633 (1761)
Q Consensus 1555 ~d~~~-~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~ 1633 (1761)
+|++. ....+++..|||+|+|+++++|||| +|++|+++|. .+|||||||+|++ |+|
T Consensus 493 ~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~---~pe~T~~~f~--------~dGw~~TGDig~~------d~d------ 549 (700)
T PTZ00216 493 LDTEEYKHTDTPEPRGEILLRGPFLFKGYYK---QEELTREVLD--------EDGWFHTGDVGSI------AAN------ 549 (700)
T ss_pred eechhhccCCCCCCCceEEEcCCcccchhcC---ChhHhhhhcc--------ccCCeeccceEEE------cCC------
Confidence 99653 2345667789999999999999999 9999999993 5689999999999 999
Q ss_pred CCCcccceEEEEcccCCeEE-eCCeecChHHHHHHHHHhccCcce--eEEEeeC--CeEEEEEEeCCCch----------
Q psy14338 1634 GVSKLHDAVFVVGALDETIM-LRGMRYHPIDIENSVMRAHKKIAE--CAVFTWT--NLLVVVVELDGNES---------- 1698 (1761)
Q Consensus 1634 g~G~~~~~l~~~GR~dd~Ik-i~G~rI~~~eIE~~~l~~~p~V~~--a~Vv~~~--~~~~a~v~~~~~~~---------- 1698 (1761)
|+ |+|+||+||||| ++|+||+|+|||+ ++.+||.|.+ ++|+... ..++|+|++.....
T Consensus 550 --G~----l~i~GR~kd~ik~~~G~~I~p~eIE~-~l~~~p~V~~~~~~v~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~ 622 (700)
T PTZ00216 550 --GT----LRIIGRVKALAKNCLGEYIALEALEA-LYGQNELVVPNGVCVLVHPARSYICALVLTDEAKAMAFAKEHGIE 622 (700)
T ss_pred --Cc----EEEEEehHhheecCCCceeccHHHHH-HHhcCcCcccceEEEEEecCCceEEEEEecCHHHHHHHHHHcCCC
Confidence 99 999999999999 8999999999999 8999999997 3444332 36788887632110
Q ss_pred -h------HhhHHHHH--------HHHHhhhcCceeeEEEEECCC----CccCCCchhhhHHHHHHHHHcCCCChhhh
Q psy14338 1699 -E------ALDLVPLV--------TNAVLEEHHLIVGVAVVVDPG----VVPINSRGEKQRMHLRDGFLADQLDPIYV 1757 (1761)
Q Consensus 1699 -~------~~~l~~~l--------~~~~Lp~~~~vP~~i~~v~~~----~lP~t~~GKvdR~~L~~~~~~~~~~~~~~ 1757 (1761)
+ ..++++.+ ++..|. .|..++.|.++++. .=-+|+++|+.|+++.+.| ...++++|.
T Consensus 623 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y-~~~i~~ly~ 698 (700)
T PTZ00216 623 GEYPAILKDPEFQKKATESLQETARAAGRK-SFEIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERY-ADLIKELFA 698 (700)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHhcCCC-CceeEeEEEEECCCCCCCCCCCChhhccchHHHHHHH-HHHHHHHhc
Confidence 0 01122222 222355 68889999988631 2236999999999999999 667888885
|
|
| >PRK06710 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-55 Score=577.98 Aligned_cols=492 Identities=18% Similarity=0.243 Sum_probs=388.2
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
+++++.|.+.+. ++|+++|++ ..++.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++|
T Consensus 24 ~~~~~~~~~~a~-----~~p~~~a~~-----~~~~~~ty~eL~~~~~~la~~L~~~-gv~~gd~V~i~~~~~~~~~~~~l 92 (563)
T PRK06710 24 QPLHKYVEQMAS-----RYPEKKALH-----FLGKDITFSVFHDKVKRFANYLQKL-GVEKGDRVAIMLPNCPQAVIGYY 92 (563)
T ss_pred ccHHHHHHHHHH-----HCCCceEEE-----ecCeeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCChHHHHHHH
Confidence 355666666554 679999999 5678999999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----cc-cc-cccC---Cc------
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----NV-VD-IKSW---PT------ 1307 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~~-~~-~~~~---~~------ 1307 (1761)
||+++|++++|++|.+|.+ ++.++++.++++++++++.....+...... .. +. ...+ ..
T Consensus 93 A~~~~G~~~vpi~p~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (563)
T PRK06710 93 GTLLAGGIVVQTNPLYTER------ELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPF 166 (563)
T ss_pred HHHHcCeEEeccCcccCHH------HHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccch
Confidence 9999999999999988887 999999999999999987544332211100 00 00 0000 00
Q ss_pred --------cccCCCCc---------c-chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHH-HcCcC
Q psy14338 1308 --------ILDTDDMP---------K-KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL-ACELY 1368 (1761)
Q Consensus 1308 --------~~~~~~~~---------~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~-~~~~~ 1368 (1761)
....+... . ...........+++++|++|||||||.||||+++|+++......... .++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 246 (563)
T PRK06710 167 VQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCK 246 (563)
T ss_pred hhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCC
Confidence 00000000 0 00000011123578999999999999999999999999865443332 34444
Q ss_pred CCC-eEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchh
Q psy14338 1369 PSR-HIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQL 1447 (1761)
Q Consensus 1369 ~~d-~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~ 1447 (1761)
.++ +++.+.|++|.+++...++.+++.|+++++.+. +++..+++.|+++++|++.++|+++..+++..
T Consensus 247 ~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------- 315 (563)
T PRK06710 247 EGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPK----FDMKMVFEAIKKHKVTLFPGAPTIYIALLNSP------- 315 (563)
T ss_pred CCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCC----CCHHHHHHHHHHcCCeEEeccHHHHHHHHcCC-------
Confidence 444 556677777777776666788999999999874 68999999999999999999999999987531
Q ss_pred hccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcc
Q psy14338 1448 KARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRV 1527 (1761)
Q Consensus 1448 ~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1527 (1761)
.....++++||.+++||+++++ .+.+++.+.++ ..+++.||+||++.++......
T Consensus 316 ~~~~~~~~~lr~v~~gg~~~~~-~~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~~------------------ 370 (563)
T PRK06710 316 LLKEYDISSIRACISGSAPLPV-EVQEKFETVTG------GKLVEGYGLTESSPVTHSNFLW------------------ 370 (563)
T ss_pred ccccCChhhhhheeeCCCcCCH-HHHHHHHHhhC------CCEecccccccCccccccCccc------------------
Confidence 1233457899999999999998 78788877663 4699999999976543221100
Q ss_pred eecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCC
Q psy14338 1528 SLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGE 1607 (1761)
Q Consensus 1528 ~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~ 1607 (1761)
... ..+++|+|++++.++|+|+++++++|.|..|||+|+|+.+++||++ +|+.|...| .+
T Consensus 371 ---~~~-----~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~~~~~~---------~~ 430 (563)
T PRK06710 371 ---EKR-----VPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKGYWN---KPEETAAVL---------QD 430 (563)
T ss_pred ---ccc-----cCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccchhhhC---ChHHHhhhc---------cc
Confidence 000 1235899999999999998778999999999999999999999999 999999887 36
Q ss_pred ceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee----
Q psy14338 1608 LYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW---- 1683 (1761)
Q Consensus 1608 ~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~---- 1683 (1761)
+||+|||+|++ ++| |+ ++++||+||+||++|.||+|.|||+ ++.+||.|.+|+|++.
T Consensus 431 g~~~TGD~~~~------~~~--------g~----~~~~GR~dd~i~~~G~~v~p~eiE~-~l~~~~~v~~~~v~~~~~~~ 491 (563)
T PRK06710 431 GWLHTGDVGYM------DED--------GF----FYVKDRKKDMIVASGFNVYPREVEE-VLYEHEKVQEVVTIGVPDPY 491 (563)
T ss_pred CcccccceEEE------cCC--------Cc----EEEeeccccEEEECCEEECHHHHHH-HHHhCcceeeEEEEccccCC
Confidence 89999999999 999 99 9999999999999999999999999 8999999999999974
Q ss_pred -CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1684 -TNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1684 -~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
++.++++|+.. +...+.++++++++++ |+ .|++|..|.+++ +||+|++||++|++|+++....
T Consensus 492 ~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-~~~~P~~~~~v~--~iP~t~~GKi~r~~L~~~~~~~ 556 (563)
T PRK06710 492 RGETVKAFVVLKEGTECSEEELNQFARKY-LA-AYKVPKVYEFRD--ELPKTTVGKILRRVLIEEEKRK 556 (563)
T ss_pred cCceeEEEEEECCCCCCCHHHHHHHHHHh-cc-cccCCcEEEEcc--cCCCCccchhhHHHHHHHHhhc
Confidence 45778888764 3345677899999986 88 999999999999 9999999999999999987543
|
|
| >PRK13391 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-55 Score=569.63 Aligned_cols=486 Identities=15% Similarity=0.206 Sum_probs=388.2
Q ss_pred HHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHH
Q psy14338 88 QRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGC 167 (1761)
Q Consensus 88 ~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAv 167 (1761)
...++++|+++|+++.+. + +.+||.||.++++++|+.|+ +.|+++|++|+++++++ +++++++|||
T Consensus 4 ~~~a~~~p~~~a~~~~~~-~---~~~ty~~l~~~~~~la~~L~--------~~g~~~~~~V~v~~~~~--~~~~~~~~a~ 69 (511)
T PRK13391 4 GIHAQTTPDKPAVIMAST-G---EVVTYRELDERSNRLAHLFR--------SLGLKRGDHVAIFMENN--LRYLEVCWAA 69 (511)
T ss_pred hhhHhhCCCceEEEecCC-C---CEeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHHHHHHHHH
Confidence 467788999999987432 2 57999999999999999999 88999999999999999 9999999999
Q ss_pred HHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-----cceeccC-CCcceeEE-eccccC
Q psy14338 168 IFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-----EVVAFKG-WPKLTWFV-TEHLAK 240 (1761)
Q Consensus 168 lkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~-~~~~~~ 240 (1761)
+++|++++|+++.++.+ ++.++++++++++++++......+...... ..+.... .....+.. .+....
T Consensus 70 ~~~G~~~~~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (511)
T PRK13391 70 ERSGLYYTCVNSHLTPA-----EAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG 144 (511)
T ss_pred HHhccEEeccccccCHH-----HHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcC
Confidence 99999999999999876 899999999999999987654332111100 0001000 00000000 000111
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEE--chHHHHH---HHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHH
Q psy14338 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTV--TRAAMLS---HCRALTQACHYTEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 241 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~--th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
.+ .....+.++.++++|||||||.||||++ +|.++.. ........+++.++++++..+|++|+.++.. .+
T Consensus 145 ~~----~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~-~~ 219 (511)
T PRK13391 145 LP----ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRA-VM 219 (511)
T ss_pred CC----CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHH-HH
Confidence 00 1111234567999999999999999995 4666543 2344556678889999999999999999875 88
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
.++..|+++++.+ .+++..+++.++++++|++.++| +++..++.... ....+++++|.+++| |+++++++.
T Consensus 220 ~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p-~~~~~l~~~~~~~~~~~~~~~l~~~~~g--g~~~~~~~~ 292 (511)
T PRK13391 220 LVIRLGGTVIVME----HFDAEQYLALIEEYGVTHTQLVP-TMFSRMLKLPEEVRDKYDLSSLEVAIHA--AAPCPPQVK 292 (511)
T ss_pred HHHHcCceEEECC----CCCHHHHHHHHHHhCCeEEEehH-HHHHHHHhCchhhcccCCccceeEEEEc--cCCCCHHHH
Confidence 8999999999987 67999999999999999999996 46666654322 223457899999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
++|.+.+ |. .+++.||+||++.++...... .....+++|+|+++
T Consensus 293 ~~~~~~~---g~---~v~~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~vG~~~~g- 336 (511)
T PRK13391 293 EQMIDWW---GP---IIHEYYAATEGLGFTACDSEE-----------------------------WLAHPGTVGRAMFG- 336 (511)
T ss_pred HHHHHHc---CC---ceeeeeccccccceEEecCcc-----------------------------ccccCCCcCCcccc-
Confidence 9999877 43 399999999998765432211 01235689999999
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
.++|+|+++. +++.|+.|||+++|+ ++.||+++|+.|++.|.+ .++||+|||+|++++||.++|+|
T Consensus 337 ~~~i~d~~~~--~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~-----------~~~w~~TGD~g~~~~~g~l~~~g 402 (511)
T PRK13391 337 DLHILDDDGA--ELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHP-----------DGTWSTVGDIGYVDEDGYLYLTD 402 (511)
T ss_pred eEEEECCCCC--CCCCCCceEEEEecC-cceEEcCChhHhHHhhcc-----------CCCEEecCCEEEECCCccEEEec
Confidence 6999999886 589999999999999 999999999999998852 15899999999999999999999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCC-----CHHHHHHHHHHHHHH
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDC-----SEEESFQWMSRVLQA 627 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~-----~~~~l~~~l~~~Lp~ 627 (1761)
|.||++|++|++|++.|||+.+.+++.+ .+++|++.++ ..++.+++++++..+. ..++++++|+++||.
T Consensus 403 R~~~~i~~~G~~v~~~eie~~l~~~~~v-----~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 477 (511)
T PRK13391 403 RAAFMIISGGVNIYPQEAENLLITHPKV-----ADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQRLSR 477 (511)
T ss_pred cCCCEEEeCCEEECHHHHHHHHHhCCCc-----ceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHHHHHHhhccc
Confidence 9999999999999999999999988777 6899998874 4577888888875532 247899999999999
Q ss_pred hhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 628 VDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 628 y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
|++|..| ..++++|+|+|||++|+.|++.+.+
T Consensus 478 ~~~P~~i-------~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 478 QKCPRSI-------DFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred CcCCcEE-------EEeecCCCCCccceeHHHHHHHhhc
Confidence 9999987 5569999999999999999998864
|
|
| >TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-55 Score=570.91 Aligned_cols=479 Identities=17% Similarity=0.232 Sum_probs=388.5
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
..+|+++|+. ..++.+||+||.++++++|+.|.+. |+++|++|+++++|+.++++++|||+++|++++|+++.+
T Consensus 11 ~~~p~~~a~~-----~~~~~~ty~el~~~~~~~a~~L~~~-g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 84 (502)
T TIGR01734 11 ETYPQTIAYR-----YQGQELTYQQLKEQSDRLAAFIQKR-ILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVDTSI 84 (502)
T ss_pred HHCCCceEEE-----cCCcEEeHHHHHHHHHHHHHHHHHh-CCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCCCcC
Confidence 3679999998 6778999999999999999999999 999999999999999999999999999999999999988
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEecc
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSV 1338 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 1338 (1761)
|.+ ++.++++.+++++++++........... .+............ .+ ........+++.++++|||
T Consensus 85 ~~~------~~~~~~~~~~~~~ii~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~il~TS 150 (502)
T TIGR01734 85 PSE------RIEMIIEAAGPELVIHTAELSIDAVGTQ---IITLSALEQAETSG-GP----VSFDHAVKGDDNYYIIYTS 150 (502)
T ss_pred hHH------HHHHHHHhcCCCEEEecccccccccCCc---eEEchHhhhhhhhc-CC----ccccccCCCCCeEEEEECC
Confidence 777 9999999999999999876533221111 11111000000000 00 0011234678999999999
Q ss_pred CCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHH
Q psy14338 1339 STTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418 (1761)
Q Consensus 1339 GSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i 1418 (1761)
||||.||||+++|+++.+.+.+....+++..+++++.+.|++|..++ ..++.++..|+++++.+... ..++..+++.+
T Consensus 151 GTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~-~~~~~~~~~~i 228 (502)
T TIGR01734 151 GSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDKDI-TNNFKLLFEEL 228 (502)
T ss_pred CCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcCHHH-hcCHHHHHHHH
Confidence 99999999999999999999999888999998988888888888776 67889999999999987532 36899999999
Q ss_pred HhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccc
Q psy14338 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498 (1761)
Q Consensus 1419 ~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE 1498 (1761)
.++++|.+.++|++++.++.. .......+++++.++++|++++. .+.+++.+.++. ..+++.||+||
T Consensus 229 ~~~~~~~~~~~p~~~~~~l~~-------~~~~~~~~~~l~~~~~~G~~~~~-~~~~~~~~~~~~-----~~~~~~yG~tE 295 (502)
T TIGR01734 229 PKTGLNVWVSTPSFVDMCLLD-------PNFNQENYPHLTHFLFCGEELPV-KTAKALLERFPK-----ATIYNTYGPTE 295 (502)
T ss_pred HHcCCeEEEEChhHHHHHHhc-------cccccccCCcccEEEEcCCcCCH-HHHHHHHHHCCC-----cEEEeCccCCc
Confidence 999999999999999887542 11234567899999999999999 788888777643 68999999999
Q ss_pred cceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcc
Q psy14338 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHN 1578 (1761)
Q Consensus 1499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v 1578 (1761)
++..+.......+ . .......++|+|++|++++|+|++ ++++|.|+.|||+|+|+.+
T Consensus 296 ~~~~~~~~~~~~~----------~------------~~~~~~~~vg~~~~~~~~~i~~~~-~~~~~~g~~Gel~v~g~~~ 352 (502)
T TIGR01734 296 ATVAVTSVKITQE----------I------------LDQYPRLPIGFAKPDMNLFIMDEE-GEPLPEGEKGEIVIVGPSV 352 (502)
T ss_pred ceEEEEEEEcccc----------c------------cccCCccccccccCCCEEEEECCC-CCCCCCCCeeEEEEccccc
Confidence 7643221100000 0 001122469999999999999966 8999999999999999999
Q ss_pred cccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCee
Q psy14338 1579 ASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMR 1658 (1761)
Q Consensus 1579 ~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~r 1658 (1761)
+.||++ +|+.|.+.|..+ ++.+||+|||+|++ | + ++ ++++||.||+||++|++
T Consensus 353 ~~gy~~---~~~~~~~~~~~~-----~~~~~~~TGDlg~~------~-~--------~~----l~i~GR~~d~i~~~G~~ 405 (502)
T TIGR01734 353 SKGYLN---NPEKTAEAFFSH-----EGQPAYRTGDAGTI------T-D--------GQ----LFYQGRLDFQIKLHGYR 405 (502)
T ss_pred cccccC---CcccchHhheeC-----CCcEEEECCCEEEE------E-C--------CE----EEEeccccCeEEECcEE
Confidence 999999 999999988432 45689999999999 6 4 56 99999999999999999
Q ss_pred cChHHHHHHHHHhccCcceeEEEee------CCeEEEEEEeCCCch-----hHhhHHHHHHHHHhhhcCceeeEEEEECC
Q psy14338 1659 YHPIDIENSVMRAHKKIAECAVFTW------TNLLVVVVELDGNES-----EALDLVPLVTNAVLEEHHLIVGVAVVVDP 1727 (1761)
Q Consensus 1659 I~~~eIE~~~l~~~p~V~~a~Vv~~------~~~~~a~v~~~~~~~-----~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~ 1727 (1761)
|+|.|||+ ++.+||+|.+|+|++. ++.++++|+...... ...+++++++++ |+ .|++|+.+++++
T Consensus 406 v~~~~IE~-~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~-l~-~~~~P~~~~~v~- 481 (502)
T TIGR01734 406 IELEDIEF-NLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKS-LP-AYMIPRKFIYRD- 481 (502)
T ss_pred eCHHHHHH-HHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhh-Ch-hhcCCcEEEEcc-
Confidence 99999999 8999999999999973 236778777643221 125788889886 88 899999999999
Q ss_pred CCccCCCchhhhHHHHHHHH
Q psy14338 1728 GVVPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1728 ~~lP~t~~GKvdR~~L~~~~ 1747 (1761)
+||+|++||++|++|++.+
T Consensus 482 -~lP~t~~gKv~r~~l~~~~ 500 (502)
T TIGR01734 482 -QLPLTANGKIDRKALAEEV 500 (502)
T ss_pred -ccCCCCCCcccHHHHHHhh
Confidence 9999999999999999976
|
This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides. |
| >PRK06164 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-55 Score=570.81 Aligned_cols=490 Identities=19% Similarity=0.222 Sum_probs=390.3
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.+...+. .+|+++|++ ..++++||+||.++++++|+.|.+. |+++|++|+++++|++++++++||
T Consensus 11 ~l~~~l~~~a~-----~~p~~~a~~-----~~~~~~Ty~~L~~~~~~~a~~L~~~-g~~~g~~V~i~~~n~~~~~~~~la 79 (540)
T PRK06164 11 TLASLLDAHAR-----ARPDAVALI-----DEDRPLSRAELRALVDRLAAWLAAQ-GVRRGDRVAVWLPNCIEWVVLFLA 79 (540)
T ss_pred CHHHHHHHHHH-----hCCCCeEEe-----cCCCcccHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEcCCcHHHHHHHHH
Confidence 45555555543 779999999 6778999999999999999999998 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH-----HHHhhhccc------cccccc-c---CCcc
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI-----KLLKSKEAS------NVVDIK-S---WPTI 1308 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~-----~~~~~~~~~------~~~~~~-~---~~~~ 1308 (1761)
|+++|++++||+|..|.+ ++.+++++++++++|++++.. ..+...... .++... . ....
T Consensus 80 ~~~~G~~~v~l~~~~~~~------~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (540)
T PRK06164 80 CARLGATVIAVNTRYRSH------EVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAP 153 (540)
T ss_pred HHHhCcEEEecCCCCCcH------HHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCC
Confidence 999999999999988887 999999999999999976532 111111100 000000 0 0000
Q ss_pred ccCC--CCcc-----chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCcc
Q psy14338 1309 LDTD--DMPK-----KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYC 1381 (1761)
Q Consensus 1309 ~~~~--~~~~-----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1381 (1761)
.... .... ...........++++++++|||||||+||||+++|+++.+.+......+++.++++++.++|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~ 233 (540)
T PRK06164 154 APGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCG 233 (540)
T ss_pred CcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchh
Confidence 0000 0000 00000011234688999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEE
Q psy14338 1382 GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCV 1461 (1761)
Q Consensus 1382 ~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~ 1461 (1761)
.+++ ..++.++..|+++++.+. +++..+++.|+++++|+++++|+++..+.+. .....++++++.+.
T Consensus 234 ~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~--------~~~~~~~~~l~~~~ 300 (540)
T PRK06164 234 VFGF-STLLGALAGGAPLVCEPV----FDAARTARALRRHRVTHTFGNDEMLRRILDT--------AGERADFPSARLFG 300 (540)
T ss_pred HHHH-HHHHHHHhcCceEEecCC----CCHHHHHHHHHHhCCeeecCCHHHHHHHHHh--------hcccCCCcceeeee
Confidence 9888 578999999999998874 7899999999999999999999999999763 12455788999887
Q ss_pred eecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCcccee
Q psy14338 1462 VVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLL 1541 (1761)
Q Consensus 1462 ~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1541 (1761)
++|.......+.+++.+. | ..+++.||+||++.++....... ....+..
T Consensus 301 ~~~~~~~~~~~~~~~~~~----~---~~~~~~YG~tE~~~~~~~~~~~~------------------------~~~~~~~ 349 (540)
T PRK06164 301 FASFAPALGELAALARAR----G---VPLTGLYGSSEVQALVALQPATD------------------------PVSVRIE 349 (540)
T ss_pred eccCCcchHHHHHHHhhc----C---CceecceeeccccceeeccCCCC------------------------CCcceec
Confidence 776443332454444332 3 57999999999866443221100 0001123
Q ss_pred cccccc-CCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEec
Q psy14338 1542 ESGKLL-PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRR 1620 (1761)
Q Consensus 1542 ~iG~p~-~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~ 1620 (1761)
+.|+|+ +++.++|+|++++++++.|+.|||||+|++++.||++ +|+.|.+.| ..++||+|||+|++
T Consensus 350 ~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~t~~~~--------~~~~~~~TGDl~~~-- 416 (540)
T PRK06164 350 GGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLD---NPDATARAL--------TDDGYFRTGDLGYT-- 416 (540)
T ss_pred cCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccC---Cchhhhhcc--------cCCCceecCCeEEE--
Confidence 478886 7999999998889999999999999999999999999 999999998 35789999999999
Q ss_pred cCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee----CCeEEEEEEeC-C
Q psy14338 1621 TSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW----TNLLVVVVELD-G 1695 (1761)
Q Consensus 1621 ~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~----~~~~~a~v~~~-~ 1695 (1761)
|+| |+ ++|.||.||+||++|++|+|.|||+ ++.+||+|.+++|++. ++.++++++.. +
T Consensus 417 ----~~~--------g~----l~~~GR~~~~i~~~G~~i~p~eIE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~vv~~~~ 479 (540)
T PRK06164 417 ----RGD--------GQ----FVYQTRMGDSLRLGGFLVNPAEIEH-ALEALPGVAAAQVVGATRDGKTVPVAFVIPTDG 479 (540)
T ss_pred ----cCC--------ce----EEEEeecCCeEEECCEEcCHHHHHH-HHHhCCCceeEEEEecCCCCceeEEEEEEeCCC
Confidence 999 99 9999999999999999999999999 8999999999999973 34677777764 3
Q ss_pred CchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCch---hhhHHHHHHHHH
Q psy14338 1696 NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRG---EKQRMHLRDGFL 1748 (1761)
Q Consensus 1696 ~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~G---KvdR~~L~~~~~ 1748 (1761)
...+.++++++|+++ || .|++|+.|++++ ++|+|++| |++|++|++++.
T Consensus 480 ~~~~~~~l~~~~~~~-l~-~~~~P~~i~~~~--~~P~t~~g~~~Ki~r~~L~~~~~ 531 (540)
T PRK06164 480 ASPDEAGLMAACREA-LA-GFKVPARVQVVE--AFPVTESANGAKIQKHRLREMAQ 531 (540)
T ss_pred CCCCHHHHHHHHHhh-cc-cCcCCcEEEEec--CCCCCCCCccccccHHHHHHHHH
Confidence 346678999999987 88 899999999999 99999999 999999998864
|
|
| >PRK12406 long-chain-fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-55 Score=565.18 Aligned_cols=471 Identities=19% Similarity=0.261 Sum_probs=380.0
Q ss_pred EEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhH
Q psy14338 111 ITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQ 190 (1761)
Q Consensus 111 ~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~r 190 (1761)
+.+||+||+++++++|++|. +.|+++|++|+++++|+ +++++++||++++|++++|++|.++.+ +
T Consensus 10 ~~~Ty~el~~~~~~la~~l~--------~~g~~~g~~V~v~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~-----~ 74 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLA--------ALGVRPGDCVALLMRND--FAFFEAAYAAMRLGAYAVPVNWHFKPE-----E 74 (509)
T ss_pred eeecHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCeEEEecCcccCHH-----H
Confidence 68999999999999999999 89999999999999999 999999999999999999999999976 8
Q ss_pred HHHHHhcCCCcEEEEcccccccCcccccc--cceeccCCCcce-eE-EeccccCC----------CCCCCCCCCCCCCCc
Q psy14338 191 IGFLLGSCDIQVALTSDACLKGLPKTAAG--EVVAFKGWPKLT-WF-VTEHLAKT----------PKDWAPQPRLTDDTP 256 (1761)
Q Consensus 191 l~~il~~~~~~~vl~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~-~~~~~~~~----------~~~~~~~~~~~~~~~ 256 (1761)
+.++++++++++++++....+.+...... ..+......... .. ..+..... ...........++++
T Consensus 75 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (509)
T PRK12406 75 IAYILEDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPYDGPPVPQP 154 (509)
T ss_pred HHHHHhccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCccCCCCCCCc
Confidence 99999999999999987655433221100 010000000000 00 00000000 000011123457899
Q ss_pred EEEEecCCCCCCceEEEEchHHHH---HHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCcccc
Q psy14338 257 AYIEYTTDRDGSVMGVTVTRAAML---SHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMK 333 (1761)
Q Consensus 257 a~ii~TSGSTG~PKgV~~th~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~ 333 (1761)
++++|||||||.||||+++|.+.. .........+++.++++++..+|++|..+... .+.++..|+++++.+ .
T Consensus 155 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~----~ 229 (509)
T PRK12406 155 QSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGVLVLQP----R 229 (509)
T ss_pred eEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHH-HHHHHhhheEEEEcc----C
Confidence 999999999999999999776543 33444556788999999999999999988775 677899999999987 6
Q ss_pred CCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccc
Q psy14338 334 VNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAIC 411 (1761)
Q Consensus 334 ~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~ 411 (1761)
.++..+++.++++++|++..+|+ ++..++.... ....++++||.+++| |+++++++.++|.+.+ |. .++
T Consensus 230 ~~~~~~~~~l~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~~~~l~~v~~g--g~~~~~~~~~~~~~~~---~~---~~~ 300 (509)
T PRK12406 230 FDPEELLQLIERHRITHMHMVPT-MFIRLLKLPEEVRAKYDVSSLRHVIHA--AAPCPADVKRAMIEWW---GP---VIY 300 (509)
T ss_pred CCHHHHHHHHHHcCCeEEEccHH-HHHHHHhCchhhcccCCCCceeEEEEc--CCCCCHHHHHHHHHHc---CC---cEE
Confidence 78999999999999999999974 7766665432 234567899999999 9999999999999887 43 399
Q ss_pred cccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCC
Q psy14338 412 PCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDE 491 (1761)
Q Consensus 412 n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~ 491 (1761)
|.||+||++.+++....+ ....+.++|+|+++++++|+|++++ +++.|.
T Consensus 301 ~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~~G~~~~~~~~~i~d~~~~--~~~~g~ 349 (509)
T PRK12406 301 EYYGSTESGAVTFATSED-----------------------------ALSHPGTVGKAAPGAELRFVDEDGR--PLPQGE 349 (509)
T ss_pred eeccccccCceEecCccc-----------------------------ccccCCCcCccCCCcEEEEECCCCC--CCCCCC
Confidence 999999998766533211 0123468999999999999999886 589999
Q ss_pred ceEEEEecCCccc-cccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHH
Q psy14338 492 VGEICVASTGTGS-QYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADD 570 (1761)
Q Consensus 492 ~GEL~i~G~~l~~-GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~e 570 (1761)
.|||+++|++++. ||+++|+.|+..+. ++||+|||+|++++||.++|+||.||+||++|++|++.|
T Consensus 350 ~Gel~v~~~~~~~~~y~~~~~~~~~~~~-------------~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~ 416 (509)
T PRK12406 350 IGEIYSRIAGNPDFTYHNKPEKRAEIDR-------------GGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAE 416 (509)
T ss_pred ceEEEEECCccccccccCCchhcccccC-------------CCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHH
Confidence 9999999999876 99999999987663 789999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCc
Q psy14338 571 IIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYL 647 (1761)
Q Consensus 571 IE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~l 647 (1761)
||+.|.+++.+ .+++|++.++ ..++.++++++.... .+.+++++++++.|+.|++|..+ +.++++
T Consensus 417 IE~~l~~~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i-------~~~~~i 484 (509)
T PRK12406 417 IEAVLHAVPGV-----HDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLKARLAGYKVPKHI-------EIMAEL 484 (509)
T ss_pred HHHHHHhCCCe-----eEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEE-------EEeccC
Confidence 99999998887 6899998875 356788899887654 57899999999999999999986 557999
Q ss_pred cCCCCCcccHHHHHHHHHc
Q psy14338 648 PKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 648 P~t~~GKidR~~L~~~~~~ 666 (1761)
|+|++||++|++|++.+..
T Consensus 485 P~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 485 PREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred CCCCccchhHHHHHHHHHh
Confidence 9999999999999988764
|
|
| >PRK05620 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-55 Score=576.44 Aligned_cols=511 Identities=15% Similarity=0.143 Sum_probs=395.6
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHh-hcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLE-RAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~-~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
++.+.+...+ .++|+++|+++ +. .+++.+||+||.++++++|++|.+ . |+++||+|+++++|+++++++++
T Consensus 11 ~~~~~l~~~a-----~~~~~~~a~~~-~~-~~~~~~Ty~el~~~~~~la~~L~~~~-g~~~gd~V~~~~~n~~e~~~~~l 82 (576)
T PRK05620 11 SLTRILEYGS-----TVHGDTTVTTW-GG-AEQEQTTFAAIGARAAALAHALHDEL-GITGDQRVGSMMYNCAEHLEVLF 82 (576)
T ss_pred cHHHHHHHHH-----HhCCCceEEEE-cC-CceEEEeHHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEeCCCHHHHHHHH
Confidence 4445555444 37799999884 22 346899999999999999999986 6 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----c-ccccc--cCCccc--cCCC
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----N-VVDIK--SWPTIL--DTDD 1313 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~-~~~~~--~~~~~~--~~~~ 1313 (1761)
||+++|++++|++|..|.+ ++.++++.++++++|++......+...... . ++... ...... ....
T Consensus 83 A~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 156 (576)
T PRK05620 83 AVACMGAVFNPLNKQLMND------QIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEG 156 (576)
T ss_pred HHHhcCCEEeecccccCHH------HHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccc
Confidence 9999999999999988777 999999999999999998765544332111 0 00000 000000 0000
Q ss_pred C--------cc-chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHH--HHHcCcCCCCeEEEEeCCccC
Q psy14338 1314 M--------PK-KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM--KLACELYPSRHIALCLDPYCG 1382 (1761)
Q Consensus 1314 ~--------~~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~--~~~~~~~~~d~~~~~~~~~~~ 1382 (1761)
. .. ...........++++++++|||||||+||||+++|+++....... ...+++..+++++..+|++|.
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 236 (576)
T PRK05620 157 IKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHV 236 (576)
T ss_pred cccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHh
Confidence 0 00 000011123467899999999999999999999999987655432 345788888999999999999
Q ss_pred hhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEe
Q psy14338 1383 LGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVV 1462 (1761)
Q Consensus 1383 ~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~ 1462 (1761)
+++ ...+.++..|+++++.+. .+++..+++.|+++++|+++.+|+++..++.... ....+..+||.+++
T Consensus 237 ~g~-~~~~~~l~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-------~~~~~~~~l~~~~~ 305 (576)
T PRK05620 237 LSW-GVPLAAFMSGTPLVFPGP---DLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYL-------KNPPERMSLQEIYV 305 (576)
T ss_pred hhh-HHHHHHHhcCceEEecCC---CCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhh-------ccCcccCceeEEEE
Confidence 887 557889999999998764 3689999999999999999999999998865321 12233458999999
Q ss_pred ecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceec
Q psy14338 1463 VAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLE 1542 (1761)
Q Consensus 1463 gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1542 (1761)
||+++++ .+.++|.+.++ ..+++.||+||++..+......... . +........+
T Consensus 306 gG~~~~~-~~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~~~~~----------~---------~~~~~~~~~~ 359 (576)
T PRK05620 306 GGSAVPP-ILIKAWEERYG------VDVVHVWGMTETSPVGTVARPPSGV----------S---------GEARWAYRVS 359 (576)
T ss_pred cCCCCCH-HHHHHHHHHhC------CceeeeccccccccceeeeccCCcc----------c---------cccccccccc
Confidence 9999999 78788877763 4699999999987544322110000 0 0000001235
Q ss_pred cccccCCcEEEEEcCCCCCCCC--CCcceEEEEcCCcccccccCCCCChhhh----HHHhhhhcccC----CCCCceEee
Q psy14338 1543 SGKLLPGVKVIIANPETKGQCG--DSHLGEIWVQSPHNASGYFSLYGDESEY----AQQFSARLVTG----NTGELYART 1612 (1761)
Q Consensus 1543 iG~p~~~~~~~v~d~~~~~~~p--~G~~GEL~i~g~~v~~GY~~~~~~p~~t----~~~F~~~p~~~----~~~~~~yrT 1612 (1761)
+|++.+|++++|+|+ +++++ .|..|||+|+|++++.|||+ +|+.| +..|..+++.. ...+|||+|
T Consensus 360 ~G~~~~~~~~~i~~~--g~~~~~~~~~~Gel~v~g~~~~~gY~~---~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~T 434 (576)
T PRK05620 360 QGRFPASLEYRIVND--GQVMESTDRNEGEIQVRGNWVTASYYH---SPTEEGGGAASTFRGEDVEDANDRFTADGWLRT 434 (576)
T ss_pred cCCcCCceeEEEecC--CccccCCCCCceEEEEEcCcccccccC---CccccccccccccccccchhhhcccccCCcEec
Confidence 899999999999995 55554 57899999999999999999 99988 77787666532 124689999
Q ss_pred CceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeE
Q psy14338 1613 GYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLL 1687 (1761)
Q Consensus 1613 GDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~ 1687 (1761)
||+|++ ++| |+ ++|+||+||+||++|.+|+|.|||+ ++.+||.|.+|+|++. ++.+
T Consensus 435 GD~~~~------~~d--------g~----l~~~GR~~d~i~~~G~~i~~~eIE~-~l~~~p~v~~~~vv~~~~~~~g~~~ 495 (576)
T PRK05620 435 GDVGSV------TRD--------GF----LTIHDRARDVIRSGGEWIYSAQLEN-YIMAAPEVVECAVIGYPDDKWGERP 495 (576)
T ss_pred CceEEE------cCC--------ce----EEEEechhhhhhcCCEEEcHHHHHH-HHhcCCCceEEEEEeccCCCcCcee
Confidence 999999 999 99 9999999999999999999999999 8999999999999974 4567
Q ss_pred EEEEEeCCC----chhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCC
Q psy14338 1688 VVVVELDGN----ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 1753 (1761)
Q Consensus 1688 ~a~v~~~~~----~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~ 1753 (1761)
+++++.... ....++|+++|+++ |+ .|++|+.|++++ +||+|++||++|++|++++.+++++
T Consensus 496 ~a~v~~~~~~~~~~~~~~~l~~~l~~~-L~-~~~~P~~i~~v~--~~P~t~~GKv~r~~L~~~~~~~~~~ 561 (576)
T PRK05620 496 LAVTVLAPGIEPTRETAERLRDQLRDR-LP-NWMLPEYWTFVD--EIDKTSVGKFDKKDLRQHLADGDFE 561 (576)
T ss_pred EEEEEecCCCCcccccHHHHHHHHHhh-Cc-cccCCeEEEEec--cCCCCCcccCcHHHHHHHHhcCCcc
Confidence 777765322 23467899999997 88 999999999999 9999999999999999999877654
|
|
| >PRK06087 short chain acyl-CoA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-55 Score=574.20 Aligned_cols=493 Identities=17% Similarity=0.231 Sum_probs=390.9
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++++.|..++. ++|+++|+.. ..++++||+||+++++++|++|++. |+++||+|+++++|++++++++||
T Consensus 24 ~l~~~~~~~~~-----~~pd~~a~~~----~~~~~~Ty~~l~~~v~~la~~l~~~-G~~~gd~V~i~~~n~~~~~~~~lA 93 (547)
T PRK06087 24 SLADYWQQTAR-----AMPDKIAVVD----NHGASYTYSALDHAASRLANWLLAK-GIEPGDRVAFQLPGWCEFTIIYLA 93 (547)
T ss_pred CHHHHHHHHHH-----HCCCceEEEc----CCCCEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHH
Confidence 45555555554 6799999982 2237899999999999999999998 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH-----HHHHhhhccc-----cccccccCC-cc--cc
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV-----IKLLKSKEAS-----NVVDIKSWP-TI--LD 1310 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~-----~~~~~~~~~~-----~~~~~~~~~-~~--~~ 1310 (1761)
|+++|++++|++|..+.+ ++.++++++++++++++... ...+...... .++...... .. ..
T Consensus 94 ~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (547)
T PRK06087 94 CLKVGAVSVPLLPSWREA------ELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLS 167 (547)
T ss_pred HHHcCcEEeccchhcCHH------HHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccC
Confidence 999999999999977776 99999999999999997532 1111111000 000000000 00 00
Q ss_pred CCC-CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHH
Q psy14338 1311 TDD-MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWV 1389 (1761)
Q Consensus 1311 ~~~-~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 1389 (1761)
... ..............++++++|+|||||||.||||+++|+++......+...+++.++++++...|++|..++...+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 247 (547)
T PRK06087 168 LSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGV 247 (547)
T ss_pred HHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHH
Confidence 000 0000000011234678999999999999999999999999999888888888999999999999999988887778
Q ss_pred HHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCCh
Q psy14338 1390 LSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPR 1469 (1761)
Q Consensus 1390 ~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~ 1469 (1761)
+.+++.|+++++.+. +++..+++.|+++++|+++.+|+.+..+++.. .....++++||.+++||+++++
T Consensus 248 ~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~-------~~~~~~~~~lr~i~~gG~~~~~ 316 (547)
T PRK06087 248 TAPFLIGARSVLLDI----FTPDACLALLEQQRCTCMLGATPFIYDLLNLL-------EKQPADLSALRFFLCGGTTIPK 316 (547)
T ss_pred HHHHhcCCEEEecCC----CCHHHHHHHHHHcCCCEEeccHHHHHHHHhcc-------ccCCCCCCCeEEEEEcCCCCCH
Confidence 899999999999874 68999999999999999998777666665532 1234567899999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCC
Q psy14338 1470 IHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPG 1549 (1761)
Q Consensus 1470 ~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~ 1549 (1761)
.+.+.+.+. | ..+++.||+||++.++....... ......++|+|++|
T Consensus 317 -~~~~~~~~~----~---~~l~~~YG~TE~~~~~~~~~~~~-------------------------~~~~~~~~G~~~~~ 363 (547)
T PRK06087 317 -KVARECQQR----G---IKLLSVYGSTESSPHAVVNLDDP-------------------------LSRFMHTDGYAAAG 363 (547)
T ss_pred -HHHHHHHHc----C---CcEEEEecccccCCccccCCCcc-------------------------hhhcCCcCCccCCC
Confidence 665555442 3 57999999999765443221100 00112358999999
Q ss_pred cEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1550 VKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1550 ~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
+.++|+|++ ++++|.|+.|||+|+|++++.||+| +++.+...| ..++||+|||+|++ |+|
T Consensus 364 ~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~~gy~~---~~~~~~~~~--------~~~g~~~TGDl~~~------~~~-- 423 (547)
T PRK06087 364 VEIKVVDEA-RKTLPPGCEGEEASRGPNVFMGYLD---EPELTARAL--------DEEGWYYSGDLCRM------DEA-- 423 (547)
T ss_pred ceEEEEcCC-CCCCcCCCcceEEEecccccccccC---CHHHHHHHh--------CCCCCcCcCceEEE------CCC--
Confidence 999999955 7899999999999999999999999 999999988 35789999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC--CchhHhh
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG--NESEALD 1702 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~--~~~~~~~ 1702 (1761)
|+ ++|+||.||+||++|.+|+|.+||+ ++..+|+|.+++|++. +++++++++... ...+.++
T Consensus 424 ------g~----l~i~GR~~d~i~~~G~~v~p~~iE~-~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~ 492 (547)
T PRK06087 424 ------GY----IKITGRKKDIIVRGGENISSREVED-ILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLTLEE 492 (547)
T ss_pred ------CC----EEEEecchhhhhcCCEEECHHHHHH-HHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCCCCCHHH
Confidence 99 9999999999999999999999999 8899999999999974 467888888642 3345678
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
+.+++..+.|+ .||+|..|.+++ +||+|.+||++|++|++.+.+.
T Consensus 493 ~~~~~~~~~l~-~~~~P~~i~~v~--~iP~t~sGK~~r~~l~~~~~~~ 537 (547)
T PRK06087 493 VVAFFSRKRVA-KYKYPEHIVVID--KLPRTASGKIQKFLLRKDIMRR 537 (547)
T ss_pred HHHHHHhcccc-ccCCCeEEEEec--cCCCCCCCcCcHHHHHHHHHHH
Confidence 88888654588 999999999999 9999999999999999887543
|
|
| >PRK06187 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-55 Score=569.28 Aligned_cols=496 Identities=18% Similarity=0.224 Sum_probs=404.9
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|..++. .+|+++|+. ..++.+||+||+++++++|+.|.+. |+++|++|+++++|+.++++++|
T Consensus 6 ~~l~~~l~~~~~-----~~p~~~a~~-----~~~~~~Ty~~l~~~~~~~a~~L~~~-g~~~~~~V~l~~~~~~~~~~~~l 74 (521)
T PRK06187 6 LTIGRILRHGAR-----KHPDKEAVY-----FDGRRTTYAELDERVNRLANALRAL-GVKKGDRVAVFDWNSHEYLEAYF 74 (521)
T ss_pred CCHHHHHHHHHH-----HCCCceEEE-----eCCceEcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHH
Confidence 456666666655 679999999 6677899999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc-----ccccccCC------ccccC
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN-----VVDIKSWP------TILDT 1311 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~-----~~~~~~~~------~~~~~ 1311 (1761)
||+++|++++|+++.+|.+ ++..+++.+++++++++......+....... .+...... .....
T Consensus 75 a~~~~G~~~v~~~~~~~~~------~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (521)
T PRK06187 75 AVPKIGAVLHPINIRLKPE------EIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEY 148 (521)
T ss_pred HHHHcCeEEEecccCCCHH------HHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccH
Confidence 9999999999999987777 9999999999999999988766554432110 00000000 00000
Q ss_pred CCC-ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHH
Q psy14338 1312 DDM-PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVL 1390 (1761)
Q Consensus 1312 ~~~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 1390 (1761)
.+. .............+++++|++|||||||.||+|.++|+++.+........+++.++++++..++++|.+++. ..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~ 227 (521)
T PRK06187 149 EELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWG-LPY 227 (521)
T ss_pred HHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHH-HHH
Confidence 000 000011112345678899999999999999999999999999999988899999999999888988877774 455
Q ss_pred HHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChH
Q psy14338 1391 SSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRI 1470 (1761)
Q Consensus 1391 ~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~ 1470 (1761)
.+++.|+++++++. +++..+++.++++++|+++++|+++..+.+... ....+++++|.+++|||+++.
T Consensus 228 ~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~-------~~~~~~~~l~~v~~~Ge~l~~- 295 (521)
T PRK06187 228 LALMAGAKQVIPRR----FDPENLLDLIETERVTFFFAVPTIWQMLLKAPR-------AYFVDFSSLRLVIYGGAALPP- 295 (521)
T ss_pred HHHHhCCEEEecCC----CCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcC-------CCccCcchhhEEEEcCcCCCH-
Confidence 69999999999875 489999999999999999999999999977432 234668899999999999999
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCc
Q psy14338 1471 HLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGV 1550 (1761)
Q Consensus 1471 ~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 1550 (1761)
.+.++|.+.++ +.+++.||+||++.++.......... .......++|+|++++
T Consensus 296 ~~~~~~~~~~~------~~v~~~YG~tE~~~~~~~~~~~~~~~---------------------~~~~~~~~~G~~~~~~ 348 (521)
T PRK06187 296 ALLREFKEKFG------IDLVQGYGMTETSPVVSVLPPEDQLP---------------------GQWTKRRSAGRPLPGV 348 (521)
T ss_pred HHHHHHHHHhC------cchheeeccCccCcccccCCcccccc---------------------cccccCCccccccCCe
Confidence 88888887762 67999999999765443221100000 0001234699999999
Q ss_pred EEEEEcCCCCCCCCC--CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1551 KVIIANPETKGQCGD--SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1551 ~~~v~d~~~~~~~p~--G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
.++|+|++ ++++|. |..|||+|+|++++.||++ +++.+.+.|. ++||+|||+|++ ++|
T Consensus 349 ~~~i~~~~-~~~~~~~~g~~Gel~v~~~~~~~~y~~---~~~~~~~~~~---------~~~~~tGD~~~~------~~~- 408 (521)
T PRK06187 349 EARIVDDD-GDELPPDGGEVGEIIVRGPWLMQGYWN---RPEATAETID---------GGWLHTGDVGYI------DED- 408 (521)
T ss_pred EEEEECCC-CCCCCCCCCCeeEEEEECcchhhhhcC---CHHHHHHHhh---------CCceeccceEEE------cCC-
Confidence 99999976 789999 9999999999999999999 9999999883 469999999999 899
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhh
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALD 1702 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~ 1702 (1761)
|. +++.||.||+||++|.+|+|.+||+ ++.++++|.+++|++. ++.++++++.. +...+..+
T Consensus 409 -------g~----~~~~GR~~~~i~~~G~~v~~~~IE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 476 (521)
T PRK06187 409 -------GY----LYITDRIKDVIISGGENIYPRELED-ALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGATLDAKE 476 (521)
T ss_pred -------CC----EEEeecccceEEcCCeEECHHHHHH-HHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCCCCHHH
Confidence 99 9999999999999999999999999 8999999999999963 45788888764 33456788
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
++++++++ |+ .|++|..+++++ +||+|++||++|++|++++.+++
T Consensus 477 l~~~l~~~-l~-~~~~p~~i~~v~--~~P~t~~gK~~r~~l~~~~~~~~ 521 (521)
T PRK06187 477 LRAFLRGR-LA-KFKLPKRIAFVD--ELPRTSVGKILKRVLREQYAEGK 521 (521)
T ss_pred HHHHHHHh-cc-CCCCceEEEEcc--CCCCCCCCCeeHHHHHHHHhcCC
Confidence 99999986 88 899999999999 99999999999999999997764
|
|
| >PRK08751 putative long-chain fatty acyl CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-55 Score=576.12 Aligned_cols=488 Identities=16% Similarity=0.194 Sum_probs=387.8
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHH-hhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLL-ERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~-~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
++++.|...+. ++|+++|++ ..++.+||+||.++++++|+.|. +. |+++|++|+++++|++++++++|
T Consensus 26 ~~~~~l~~~~~-----~~~~~~a~~-----~~~~~~Ty~el~~~~~~la~~L~~~~-g~~~g~~V~i~~~~~~~~~~~~l 94 (560)
T PRK08751 26 TVAEVFATSVA-----KFADRPAYH-----SFGKTITYREADQLVEQFAAYLLGEL-QLKKGDRVALMMPNCLQYPIATF 94 (560)
T ss_pred cHHHHHHHHHH-----hCCCCceEE-----ECCceeeHHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCCHHHHHHHH
Confidence 34555555543 779999998 56789999999999999999997 56 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc----cccc--c---cCCc------
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN----VVDI--K---SWPT------ 1307 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~----~~~~--~---~~~~------ 1307 (1761)
||+++|++++|++|.++.+ ++.+++++++++++++++.....+....... ++.. . .+..
T Consensus 95 A~~~~G~~~v~l~p~~~~~------~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (560)
T PRK08751 95 GVLRAGLTVVNVNPLYTPR------ELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNF 168 (560)
T ss_pred HHHHhCeEEeccCccCCHH------HHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhh
Confidence 9999999999999988877 9999999999999999876654433321100 0000 0 0000
Q ss_pred -------cccCCCCcc-----------chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC---
Q psy14338 1308 -------ILDTDDMPK-----------KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE--- 1366 (1761)
Q Consensus 1308 -------~~~~~~~~~-----------~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--- 1366 (1761)
.......+. ...........++++++++|||||||.||||+++|+++...+......++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 248 (560)
T PRK08751 169 VVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTG 248 (560)
T ss_pred hhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhcccc
Confidence 000000000 00001112346789999999999999999999999999988877666554
Q ss_pred -cCCCC-eEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCc
Q psy14338 1367 -LYPSR-HIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSI 1444 (1761)
Q Consensus 1367 -~~~~d-~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~ 1444 (1761)
+.+++ .++.+.+++|.+++....+.++..|+++++..+ .+++..+++.|+++++|++..+|+++..+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~---- 321 (560)
T PRK08751 249 KLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISN---PRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTP---- 321 (560)
T ss_pred ccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecC---cCCHHHHHHHHHhcceeEecChHHHHHHHHcCc----
Confidence 33333 455667778878876666778888999888765 368999999999999999999999999987631
Q ss_pred chhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEeccccccc
Q psy14338 1445 PQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRN 1524 (1761)
Q Consensus 1445 ~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~ 1524 (1761)
.....++++||.+++||++++. .+.+.|.+.++ ..+++.||+||++..+...... .
T Consensus 322 ---~~~~~~l~~lr~v~~gG~~~~~-~~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~~------------~-- 377 (560)
T PRK08751 322 ---GFDQIDFSSLKMTLGGGMAVQR-SVAERWKQVTG------LTLVEAYGLTETSPAACINPLT------------L-- 377 (560)
T ss_pred ---CcCCcchhhheeeeeCCCCCCH-HHHHHHHHHhC------CeEEEeeccccCCCceeccccc------------c--
Confidence 1234567899999999999998 78888877653 4699999999976543221100 0
Q ss_pred CcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCC
Q psy14338 1525 DRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGN 1604 (1761)
Q Consensus 1525 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~ 1604 (1761)
.....++|+|+++++++|+|+ .++++|.|+.|||+|+|+.+++||++ +|+.|++.|
T Consensus 378 ------------~~~~~~vG~~~~~~~v~i~d~-~~~~~~~g~~Gel~v~~~~~~~gy~~---~~~~~~~~~-------- 433 (560)
T PRK08751 378 ------------KEYNGSIGLPIPSTDACIKDD-AGTVLAIGEIGELCIKGPQVMKGYWK---RPEETAKVM-------- 433 (560)
T ss_pred ------------cccCCCcCccCCCceEEEECC-CCCCCCCCCceEEEEecCccchhhcC---Chhhhhhcc--------
Confidence 001235999999999999995 48999999999999999999999999 999999888
Q ss_pred CCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-
Q psy14338 1605 TGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW- 1683 (1761)
Q Consensus 1605 ~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~- 1683 (1761)
..+|||+|||+|++ ++| |+ ++++||.||+||++|++|+|.|||+ ++..||+|.+|+|++.
T Consensus 434 ~~~g~~~TGD~~~~------~~~--------g~----l~i~GR~~d~i~~~G~~v~p~eiE~-~l~~~~~v~~~~v~~~~ 494 (560)
T PRK08751 434 DADGWLHTGDIARM------DEQ--------GF----VYIVDRKKDMILVSGFNVYPNEIED-VIAMMPGVLEVAAVGVP 494 (560)
T ss_pred ccCCCccccceEEE------cCC--------ce----EEEEeechhheeECCEEEcHHHHHH-HHHhCcCeeeeEEEecC
Confidence 35689999999999 999 99 9999999999999999999999999 8999999999999974
Q ss_pred ----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHH
Q psy14338 1684 ----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 1746 (1761)
Q Consensus 1684 ----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~ 1746 (1761)
++.++++++.++...+.++++++++++ |+ .|++|..|++++ +||+|++||++|++|++.
T Consensus 495 ~~~~ge~~~~~v~~~~~~~~~~~l~~~~~~~-l~-~~~~P~~v~~v~--~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 495 DEKSGEIVKVVIVKKDPALTAEDVKAHARAN-LT-GYKQPRIIEFRK--ELPKTNVGKILRRELRDA 557 (560)
T ss_pred CCCCCceEEEEEEcCCCCCCHHHHHHHHHHh-hh-hccCCeEEEEhh--hCCCCccccccHHHHHHh
Confidence 446777777665556778999999997 88 899999999999 999999999999999876
|
|
| >PRK07059 Long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-55 Score=572.18 Aligned_cols=488 Identities=16% Similarity=0.192 Sum_probs=387.6
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.|...+. ++|+++|++ +.++.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++||
T Consensus 24 ~i~~~l~~~a~-----~~p~~~a~~-----~~~~~lTy~~l~~~~~~~a~~L~~~-gi~~gd~V~i~~~n~~~~~~~~la 92 (557)
T PRK07059 24 SLADLLEESFR-----QYADRPAFI-----CMGKAITYGELDELSRALAAWLQSR-GLAKGARVAIMMPNVLQYPVAIAA 92 (557)
T ss_pred CHHHHHHHHHH-----HcCCCceEE-----EcCceeeHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCCHHHHHHHHH
Confidence 45556655544 679999999 5678999999999999999999999 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc---ccccccCCcc------------
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN---VVDIKSWPTI------------ 1308 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~---~~~~~~~~~~------------ 1308 (1761)
|+++|++++|++|.++.+ ++.+++++++++++|+++.....+....... .+........
T Consensus 93 ~~~~G~~~v~v~~~~~~~------~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (557)
T PRK07059 93 VLRAGYVVVNVNPLYTPR------ELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVV 166 (557)
T ss_pred HHhcCeEEeccCcccCHH------HHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccc
Confidence 999999999999987777 9999999999999999887655443321100 0000000000
Q ss_pred ------c---cC-CCC------c-cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC----c
Q psy14338 1309 ------L---DT-DDM------P-KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE----L 1367 (1761)
Q Consensus 1309 ------~---~~-~~~------~-~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~----~ 1367 (1761)
. .. ... . ............++++|+|+|||||||.||||+++|+++...+......+. .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 246 (557)
T PRK07059 167 RRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEK 246 (557)
T ss_pred ccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccc
Confidence 0 00 000 0 000011123456789999999999999999999999999876654433221 1
Q ss_pred C---CCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCc
Q psy14338 1368 Y---PSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSI 1444 (1761)
Q Consensus 1368 ~---~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~ 1444 (1761)
. ....++..++++|.+++....+.++..|++.++.+. ..++..+++.++++++|++..+|+++..+....
T Consensus 247 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~---- 319 (557)
T PRK07059 247 KPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPN---PRDIPGFIKELKKYQVHIFPAVNTLYNALLNNP---- 319 (557)
T ss_pred cCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecC---CcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCc----
Confidence 1 123455677888887776677888999999888774 258999999999999999999999999987631
Q ss_pred chhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEeccccccc
Q psy14338 1445 PQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRN 1524 (1761)
Q Consensus 1445 ~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~ 1524 (1761)
.....+++++|.++.||+++++ .+.++|.+.++ ..+++.||+||++.++.......
T Consensus 320 ---~~~~~~~~~l~~~~~gg~~~~~-~~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~~~-------------- 375 (557)
T PRK07059 320 ---DFDKLDFSKLIVANGGGMAVQR-PVAERWLEMTG------CPITEGYGLSETSPVATCNPVDA-------------- 375 (557)
T ss_pred ---CcCcCCchhheEEEeccccCCH-HHHHHHHHHhC------CCeeeccccccccchhhcCCCCC--------------
Confidence 2234567899999999999998 78788877653 57999999999876543221100
Q ss_pred CcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCC
Q psy14338 1525 DRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGN 1604 (1761)
Q Consensus 1525 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~ 1604 (1761)
.....++|+|++|++++|+|++ ++++|.|+.|||+|+|+.++.||++ +++.|.+.|
T Consensus 376 ------------~~~~~~vG~p~~g~~v~i~d~~-~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~~~~~~-------- 431 (557)
T PRK07059 376 ------------TEFSGTIGLPLPSTEVSIRDDD-GNDLPLGEPGEICIRGPQVMAGYWN---RPDETAKVM-------- 431 (557)
T ss_pred ------------CCcCCcccCccCCcEEEEECCC-CCCCCCCCceEEEEeCCccchhhhc---CHHHHhhhc--------
Confidence 0012359999999999999965 8999999999999999999999999 999999888
Q ss_pred CCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-
Q psy14338 1605 TGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW- 1683 (1761)
Q Consensus 1605 ~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~- 1683 (1761)
..+|||+|||+|++ ++| |+ ++++||+||+||++|++|+|.|||+ ++..||+|.+++|++.
T Consensus 432 ~~~g~~~TGDl~~~------~~~--------g~----~~~~GR~~~~i~~~G~~i~p~~iE~-~l~~~~~V~~~~v~~~~ 492 (557)
T PRK07059 432 TADGFFRTGDVGVM------DER--------GY----TKIVDRKKDMILVSGFNVYPNEIEE-VVASHPGVLEVAAVGVP 492 (557)
T ss_pred ccCCceecCcEEEE------cCC--------Cc----EEEecccccceEECCEEEcHHHHHH-HHHhCCceeEEEEEecc
Confidence 35789999999999 999 99 9999999999999999999999999 8999999999999873
Q ss_pred ----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHH
Q psy14338 1684 ----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 1746 (1761)
Q Consensus 1684 ----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~ 1746 (1761)
++.++++++..+...+.++++++++++ |+ .|++|..+.+++ ++|+|++||++|+.|+++
T Consensus 493 ~~~~ge~~~~~v~~~~~~~~~~~l~~~~~~~-l~-~~~~P~~i~~v~--~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 493 DEHSGEAVKLFVVKKDPALTEEDVKAFCKER-LT-NYKRPKFVEFRT--ELPKTNVGKILRRELRDG 555 (557)
T ss_pred cCCCCeeEEEEEEeCCCCCCHHHHHHHHHHh-cc-cccCCcEEEEec--cCCCCcccceeHHHHHhh
Confidence 457888888765556678899999987 88 899999999999 999999999999999864
|
|
| >PRK08162 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-54 Score=566.78 Aligned_cols=504 Identities=16% Similarity=0.146 Sum_probs=385.1
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.+..+.|++.++.+|+++|+.+.+ ..+||+||.++++++|..|. +.|+++|++|+++++|+ ++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~a~~~~~------~~~ty~~L~~~~~~~a~~L~--------~~g~~~g~~v~i~~~~~--~~ 80 (545)
T PRK08162 17 PLTPLSFLERAAEVYPDRPAVIHGD------RRRTWAETYARCRRLASALA--------RRGIGRGDTVAVLLPNI--PA 80 (545)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEECC------eEEEHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCc--hH
Confidence 4578889999999999999998754 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc----cccceeccCCCc------
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA----AGEVVAFKGWPK------ 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~----~~~~~~~~~~~~------ 229 (1761)
+++++|||+++|++++|++|.++.+ ++.++++++++++++++....+.+.... ....+.+.....
T Consensus 81 ~~~~~lA~~~~G~~~vpl~~~~~~~-----~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (545)
T PRK08162 81 MVEAHFGVPMAGAVLNTLNTRLDAA-----SIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGR 155 (545)
T ss_pred HHHHHHHHHHhCcEEeccccccChH-----HHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCC
Confidence 9999999999999999999999877 8999999999999999987544332210 000111110000
Q ss_pred -ceeEEec-cccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcch
Q psy14338 230 -LTWFVTE-HLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRE 307 (1761)
Q Consensus 230 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 307 (1761)
......+ ...............+.+++++|+|||||||.||||+++|+++...+......+++..++++++.+|++|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 235 (545)
T PRK08162 156 FIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHC 235 (545)
T ss_pred CcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhh
Confidence 0000000 00000011111112244689999999999999999999999987777666667788889999999999999
Q ss_pred hhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCcc
Q psy14338 308 TGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANP 387 (1761)
Q Consensus 308 ~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~ 387 (1761)
.++.. .+...+.|++.++.. .+++..+++.|+++++|++..+| .++..++.........+.+++.+++| |++
T Consensus 236 ~~~~~-~~~~~~~~g~~~~~~----~~~~~~~~~~l~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~~~~~~~~--g~~ 307 (545)
T PRK08162 236 NGWCF-PWTVAARAGTNVCLR----KVDPKLIFDLIREHGVTHYCGAP-IVLSALINAPAEWRAGIDHPVHAMVA--GAA 307 (545)
T ss_pred hhHHH-HHHHHHHccEEEEeC----CCCHHHHHHHHHHcCCeEEEech-HHHHHHHhCccccccCCccceEEEEC--CCC
Confidence 88765 444445566666665 57899999999999999999996 47777776543333344566667777 888
Q ss_pred CCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccC
Q psy14338 388 WSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCG 467 (1761)
Q Consensus 388 l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 467 (1761)
++....+.|.+. |++ ++|.||+||++..++......... .. . .........++|
T Consensus 308 ~~~~~~~~~~~~----~~~---~~~~YG~tE~~~~~~~~~~~~~~~---------------~~---~-~~~~~~~~~~~g 361 (545)
T PRK08162 308 PPAAVIAKMEEI----GFD---LTHVYGLTETYGPATVCAWQPEWD---------------AL---P-LDERAQLKARQG 361 (545)
T ss_pred CCHHHHHHHHHh----CCc---eeecccccccCcceeecccccccc---------------cC---C-ccchhhccCCCC
Confidence 999998888753 443 999999999864332221100000 00 0 000011234567
Q ss_pred CCCC-CcEEEEEeCCCCcccCCC-C-CceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEe
Q psy14338 468 QVMP-GCIMTVVKMDSPSYLCKT-D-EVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLG 544 (1761)
Q Consensus 468 ~p~~-~~~~~I~d~~~~~~~~p~-G-~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~ 544 (1761)
.+++ +..++|+|+++.. ++|. | +.|||+|+|+.++.||+++++.|.++|. ++||+|||+|++|
T Consensus 362 ~~~~~~~~~~i~d~~~~~-~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~-------------~g~~~TGDl~~~d 427 (545)
T PRK08162 362 VRYPLQEGVTVLDPDTMQ-PVPADGETIGEIMFRGNIVMKGYLKNPKATEEAFA-------------GGWFHTGDLAVLH 427 (545)
T ss_pred cccCCcceEEEEcCCCCc-ccCCCCCceeEEEEecCcchhhhcCChhhhHHHhh-------------CCCcccCceEEEc
Confidence 6665 3468899964332 5665 3 4799999999999999999999999995 6899999999999
Q ss_pred CCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHH
Q psy14338 545 PGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWM 621 (1761)
Q Consensus 545 ~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l 621 (1761)
+||.++|+||.||+||++|+||+|.|||+.|.+++.+ .+++|++.++. .++.++++++..++ .+.+++++++
T Consensus 428 ~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v-----~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 502 (545)
T PRK08162 428 PDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAV-----LVAAVVAKPDPKWGEVPCAFVELKDGASATEEEIIAHC 502 (545)
T ss_pred CCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcc-----cEEEEEeeeccccCceEEEEEEeCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999998887 68999998743 56788999887654 5788999999
Q ss_pred HHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 622 SRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 622 ~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
++.||.|++|..+ + ..++|+|+|||++|+.|++.+.
T Consensus 503 ~~~l~~~~~P~~~-------~-~~~iP~t~~gK~~r~~l~~~~~ 538 (545)
T PRK08162 503 REHLAGFKVPKAV-------V-FGELPKTSTGKIQKFVLREQAK 538 (545)
T ss_pred HHhcccccCCcEE-------E-ecccCCCCCcCCcHHHHHHHHh
Confidence 9999999999986 2 2679999999999999998764
|
|
| >PRK06188 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-55 Score=567.00 Aligned_cols=494 Identities=19% Similarity=0.230 Sum_probs=397.4
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.|.+++. ++|+++|++ ++++.+||.||.++++++|+.|.+. |+++|++|+++++|++++++++||
T Consensus 13 ~~~~~~~~~~~-----~~~~~~a~~-----~~~~~~Ty~~l~~~~~~~a~~L~~~-gv~~~~~V~i~~~~~~~~~~~~la 81 (524)
T PRK06188 13 TYGHLLVSALK-----RYPDRPALV-----LGDTRLTYGQLADRISRYIQAFEAL-GLGTGDAVALLSLNRPEVLMAIGA 81 (524)
T ss_pred cHHHHHHHHHH-----HCCCCeEEE-----ECCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHH
Confidence 45566666654 679999999 6678999999999999999999998 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechh-HHHHHhhhccc-----cccccccC---CccccCCCC
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQN-VIKLLKSKEAS-----NVVDIKSW---PTILDTDDM 1314 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~-~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~ 1314 (1761)
|+++|++++|++|..+.+ ++..++++++++++++++. ........... ..+..... .......
T Consensus 82 ~~~~G~~~v~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 153 (524)
T PRK06188 82 AQLAGLRRTALHPLGSLD------DHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAA-- 153 (524)
T ss_pred HHHhCCEEEecccCCCHH------HHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhh--
Confidence 999999999999977666 9999999999999999876 32222211100 00100000 0000000
Q ss_pred ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhh
Q psy14338 1315 PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVY 1394 (1761)
Q Consensus 1315 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~ 1394 (1761)
.............++++++|+|||||||.||||+++|+++.+.+......+++..+++++...+++|..++ .++.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~--~~~~~l~ 231 (524)
T PRK06188 154 AKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGA--FFLPTLL 231 (524)
T ss_pred hccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhH--HHHHHHH
Confidence 00000011122345679999999999999999999999999999999999999999999999999887665 3678899
Q ss_pred cCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHH
Q psy14338 1395 SGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTS 1474 (1761)
Q Consensus 1395 ~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~ 1474 (1761)
.|+++++.+. +++..+++.|+++++|+++++|+++..+++.. .....+++++|.+++||+++++ .+.+
T Consensus 232 ~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~-------~~~~~~l~~lr~~~~gg~~~~~-~~~~ 299 (524)
T PRK06188 232 RGGTVIVLAK----FDPAEVLRAIEEQRITATFLVPTMIYALLDHP-------DLRTRDLSSLETVYYGASPMSP-VRLA 299 (524)
T ss_pred cCCEEEEcCC----CCHHHHHHHHHHhCCEEEEehHHHHHHHHhCc-------CccCCCCcceeEEEEcCCCCCH-HHHH
Confidence 9999999884 68999999999999999999999999987632 2234578899999999999999 6666
Q ss_pred HHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEE
Q psy14338 1475 AFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVII 1554 (1761)
Q Consensus 1475 ~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v 1554 (1761)
.+.+.+ | ..+++.||+||++..+........ . ........++|+|++|++++|
T Consensus 300 ~~~~~~---~---~~~~~~YG~tE~~~~~~~~~~~~~-------------~--------~~~~~~~~~~G~p~~g~~v~i 352 (524)
T PRK06188 300 EAIERF---G---PIFAQYYGQTEAPMVITYLRKRDH-------------D--------PDDPKRLTSCGRPTPGLRVAL 352 (524)
T ss_pred HHHHHh---C---chhhheeCccccCCceeecCchhc-------------c--------ccccccCCccccccCCcEEEE
Confidence 665554 3 458999999998543322111000 0 000112356999999999999
Q ss_pred EcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCC
Q psy14338 1555 ANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPG 1634 (1761)
Q Consensus 1555 ~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g 1634 (1761)
+|++ +++++.|+.|||+|+|+.++.||++ +++.+.+.| .+|||+|||+|++ ++|
T Consensus 353 ~~~~-~~~~~~g~~Gel~v~~~~~~~gy~~---~~~~~~~~~---------~~g~~~TGDl~~~------~~~------- 406 (524)
T PRK06188 353 LDED-GREVAQGEVGEICVRGPLVMDGYWN---RPEETAEAF---------RDGWLHTGDVARE------DED------- 406 (524)
T ss_pred EcCC-CCCCCCCCeeEEEEECcchhhhhcC---ChHHhhhhh---------cCCceeecceEEE------cCC-------
Confidence 9966 8999999999999999999999999 999999888 3689999999999 999
Q ss_pred CCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHH
Q psy14338 1635 VSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVT 1708 (1761)
Q Consensus 1635 ~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~ 1708 (1761)
|+ ++|+||.|++||++|++|+|.|||+ +|..||+|.+++|++. ++.++++++.. +.....++++++++
T Consensus 407 -g~----~~~~GR~~~~i~~~G~~i~~~~IE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 480 (524)
T PRK06188 407 -GF----YYIVDRKKDMIVTGGFNVFPREVED-VLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQAHVK 480 (524)
T ss_pred -cc----EEEEeccccceecCCEEECHHHHHH-HHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 34678888764 23445678999999
Q ss_pred HHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCC
Q psy14338 1709 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 1753 (1761)
Q Consensus 1709 ~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~ 1753 (1761)
+. ++ .|++|..|++++ +||+|++||++|++|++.+.++.+.
T Consensus 481 ~~-l~-~~~~p~~i~~v~--~~P~t~~gKi~r~~L~~~~~~~~~~ 521 (524)
T PRK06188 481 ER-KG-SVHAPKQVDFVD--SLPLTALGKPDKKALRARYWEGRGR 521 (524)
T ss_pred Hh-cc-cCCCCcEEEEec--CCCCCccccccHHHHHHHHHhhccc
Confidence 87 88 899999999999 9999999999999999998776653
|
|
| >PRK06178 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-55 Score=571.25 Aligned_cols=497 Identities=19% Similarity=0.240 Sum_probs=390.9
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++.+.|...+. .+|+++|+. ..++.+||.||+++++++|+.|.+. |+++|++|+++++|+++++++++
T Consensus 33 ~~l~~~l~~~a~-----~~p~~~al~-----~~~~~~Ty~~l~~~~~~la~~L~~~-g~~~g~~V~i~~~n~~~~~~~~l 101 (567)
T PRK06178 33 RPLTEYLRAWAR-----ERPQRPAII-----FYGHVITYAELDELSDRFAALLRQR-GVGAGDRVAVFLPNCPQFHIVFF 101 (567)
T ss_pred ccHHHHHHHHHH-----HCCCceEEE-----ECCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCcHHHHHHH
Confidence 455556655543 679999999 5678999999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccc---ccccCCccccC--------
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVV---DIKSWPTILDT-------- 1311 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------- 1311 (1761)
||+++|++++|++|..+.+ ++.++++++++++++++....+.+........+ ...........
T Consensus 102 A~~~~G~~~v~l~p~~~~~------~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 175 (567)
T PRK06178 102 GILKLGAVHVPVSPLFREH------ELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPD 175 (567)
T ss_pred HHHHhCeEEeecCCCCCHH------HHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccccc
Confidence 9999999999999987777 999999999999999998776555433211000 00000000000
Q ss_pred ---------C---CC----ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHH-HcCcCCCCeEE
Q psy14338 1312 ---------D---DM----PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL-ACELYPSRHIA 1374 (1761)
Q Consensus 1312 ---------~---~~----~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~~d~~~ 1374 (1761)
. .. .............++++|+|+|||||||.||||+++|+++...+..... ...+.++|+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l 255 (567)
T PRK06178 176 SLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFL 255 (567)
T ss_pred ccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEE
Confidence 0 00 0000001112356789999999999999999999999999877655433 35677888888
Q ss_pred EEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCC
Q psy14338 1375 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIAL 1454 (1761)
Q Consensus 1375 ~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l 1454 (1761)
.++|++|.+|....++.++++|+++++.++ +++..++..|+++++|.+.++|..+..+.+.. .....++
T Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~-------~~~~~~l 324 (567)
T PRK06178 256 SFLPEFWIAGENFGLLFPLFSGATLVLLAR----WDAVAFMAAVERYRVTRTVMLVDNAVELMDHP-------RFAEYDL 324 (567)
T ss_pred EecchHHHHHHHHHHHHHHHcCceEEEeCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCC-------CCCCCCc
Confidence 899998888886778899999999999874 68999999999999999999999998886521 1234456
Q ss_pred CcceEEEee--cCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceeccc
Q psy14338 1455 GCVRTCVVV--AEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVER 1532 (1761)
Q Consensus 1455 ~~Lr~v~~g--Ge~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1532 (1761)
++++.+..+ |+.+++ .+.+.|.+.++. ..+.+.||+||++..+......... ..
T Consensus 325 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~g~-----~~~~~~YG~tE~~~~~~~~~~~~~~-~~----------------- 380 (567)
T PRK06178 325 SSLRQVRVVSFVKKLNP-DYRQRWRALTGS-----VLAEAAWGMTETHTCDTFTAGFQDD-DF----------------- 380 (567)
T ss_pred chheeeeeccccccCCH-HHHHHHHHHhCC-----cccccccccccccccceeccccccC-cc-----------------
Confidence 788876544 588888 788888777642 2344689999976543222110000 00
Q ss_pred CCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEee
Q psy14338 1533 GSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYART 1612 (1761)
Q Consensus 1533 ~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrT 1612 (1761)
....+.+++|+|++|++++|+|+++++++|.|++|||+|+|++++.||+| +++.|++.| .+|||+|
T Consensus 381 --~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY~~---~~~~~~~~~---------~dg~~~T 446 (567)
T PRK06178 381 --DLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKGYWN---KPEATAEAL---------RDGWLHT 446 (567)
T ss_pred --ccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCcccccccC---Chhhhhhcc---------cCCceee
Confidence 00012345999999999999997779999999999999999999999999 999999887 3579999
Q ss_pred CceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeE
Q psy14338 1613 GYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLL 1687 (1761)
Q Consensus 1613 GDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~ 1687 (1761)
||+|++ ++| |+ ++|+||+||+||++|++|+|.|||+ ++..+|+|.+++|++. ++.+
T Consensus 447 GDl~~~------~~~--------g~----l~i~GR~~d~i~~~G~~i~~~eiE~-~l~~~~~v~~~~v~~~~~~~~g~~~ 507 (567)
T PRK06178 447 GDIGKI------DEQ--------GF----LHYLGRRKEMLKVNGMSVFPSEVEA-LLGQHPAVLGSAVVGRPDPDKGQVP 507 (567)
T ss_pred cceEEE------ecC--------Ce----EEEEecccccEEECCEEECHHHHHH-HHHhCCCeeEEEEEcCcCcccCcce
Confidence 999999 899 99 9999999999999999999999999 8999999999999973 4577
Q ss_pred EEEEEeCC-CchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1688 VVVVELDG-NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1688 ~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+++|+... ...+.++++++++++ |+ .|++|. +++++ ++|+|++||++|++|++.+.+
T Consensus 508 ~~~v~~~~~~~~~~~~l~~~~~~~-l~-~~~~p~-i~~v~--~iP~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 508 VAFVQLKPGADLTAAALQAWCREN-MA-VYKVPE-IRIVD--ALPMTATGKVRKQDLQALAEE 565 (567)
T ss_pred EEEEEeCCCCcCCHHHHHHHHHhc-Cc-ccCCce-EEEec--cCCCCCccceeHHHHHHHHHh
Confidence 88887643 345678899999986 88 999997 88899 999999999999999998854
|
|
| >PLN02430 long-chain-fatty-acid-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-55 Score=579.97 Aligned_cols=509 Identities=16% Similarity=0.157 Sum_probs=379.1
Q ss_pred cccccccccccCCCCcCCCCCCCceEEcc---CCC-CceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVD---TRS-AAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLI 1238 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d---~~~-~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~i 1238 (1761)
.++.+.|.+.+. ++|+++|+.+.. ... ....+||+||.++++++|+.|.+. |+++||+|+|+++|++||+
T Consensus 42 ~t~~~~~~~~~~-----~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-Gv~~gd~V~i~~~n~~ew~ 115 (660)
T PLN02430 42 TTAWDIFSKSVE-----KYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRAS-GAEPGSRVGIYGSNCPQWI 115 (660)
T ss_pred CCHHHHHHHHHH-----hCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHH
Confidence 466667766654 779999987532 111 123579999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH-HHHhhhcc-----cccccccc--------
Q psy14338 1239 CAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI-KLLKSKEA-----SNVVDIKS-------- 1304 (1761)
Q Consensus 1239 va~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~-~~~~~~~~-----~~~~~~~~-------- 1304 (1761)
+++|||+++|+++|||+|..+.+ ++.+++++++++++|++.... ..+..... ..++....
T Consensus 116 ~~~lA~~~~G~v~vpl~~~~~~~------~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~ 189 (660)
T PLN02430 116 VAMEACAAHSLICVPLYDTLGPG------AVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDK 189 (660)
T ss_pred HHHHHHHHcCCeEEEeccCCCHH------HHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhh
Confidence 99999999999999999987777 999999999999999987532 22221100 00111100
Q ss_pred ----------CCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc-----CcCC
Q psy14338 1305 ----------WPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC-----ELYP 1369 (1761)
Q Consensus 1305 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~ 1369 (1761)
+.++.... ...........|+++++|+|||||||.||||++||+|+...+......+ ++.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~ 265 (660)
T PLN02430 190 ASQIGVKTYSWIDFLHMG----KENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTH 265 (660)
T ss_pred hhcCCcEEEEHHHHHHhh----ccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCC
Confidence 00000000 0000111234689999999999999999999999999998877654322 4678
Q ss_pred CCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhh-
Q psy14338 1370 SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLK- 1448 (1761)
Q Consensus 1370 ~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~- 1448 (1761)
+|+++.++|++|.++... .+..+..|+++++... ++..+++.|+++++|++.++|.+++.+.+.+.+......
T Consensus 266 ~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-----~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~ 339 (660)
T PLN02430 266 DDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNP 339 (660)
T ss_pred CCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-----ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCH
Confidence 889999999999888754 4557889999988753 678899999999999999999999988653221100000
Q ss_pred -----------------------ccCC---C-----------CCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccc
Q psy14338 1449 -----------------------ARNI---A-----------LGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVS 1491 (1761)
Q Consensus 1449 -----------------------~~~~---~-----------l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~ 1491 (1761)
.... + -++||.+++||+++++ ++.+.+ +.+ |. ..++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~-~~~~~~-~~~---~~--~~i~ 412 (660)
T PLN02430 340 RRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLST-EIEEFL-RVT---SC--AFVV 412 (660)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCH-HHHHHH-HHh---cC--CCee
Confidence 0000 0 1589999999999999 664433 333 21 4689
Q ss_pred ccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEc-CCCC-CCCCCCcce
Q psy14338 1492 TSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIAN-PETK-GQCGDSHLG 1569 (1761)
Q Consensus 1492 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~-~~~p~G~~G 1569 (1761)
+.||+||+++.++.+... .....+++|+|+++++++|+| ++.+ .+++.|..|
T Consensus 413 ~~YG~TE~~~~~~~~~~~--------------------------~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~G 466 (660)
T PLN02430 413 QGYGLTETLGPTTLGFPD--------------------------EMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRG 466 (660)
T ss_pred eecchhhhhhceEeeccc--------------------------cCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcc
Confidence 999999986544322110 001134699999999999987 3323 566777889
Q ss_pred EEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccC
Q psy14338 1570 EIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALD 1649 (1761)
Q Consensus 1570 EL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~d 1649 (1761)
||+|+|++++.|||+ +|+.|++.| .+|||+|||+|++ |+| |+ |+|+||+|
T Consensus 467 Ei~vrg~~v~~GY~~---~~e~t~~~~---------~dGw~~TGDig~~------d~d--------G~----l~i~gR~k 516 (660)
T PLN02430 467 EICVRGKCLFSGYYK---NPELTEEVM---------KDGWFHTGDIGEI------LPN--------GV----LKIIDRKK 516 (660)
T ss_pred eEEecCCCccccccC---ChHHhhhhh---------hccceeccceEEE------CCC--------Cc----EEEEEccc
Confidence 999999999999999 999999998 3789999999999 999 99 99999999
Q ss_pred CeEEe-CCeecChHHHHHHHHHhccCcceeEEEeeC--CeEEEEEEeCCCch-----------------hHhhHHHH---
Q psy14338 1650 ETIML-RGMRYHPIDIENSVMRAHKKIAECAVFTWT--NLLVVVVELDGNES-----------------EALDLVPL--- 1706 (1761)
Q Consensus 1650 d~Iki-~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~--~~~~a~v~~~~~~~-----------------~~~~l~~~--- 1706 (1761)
|+||+ +|++|+|.|||+ ++.+||.|.+|+|++.+ +.++|+|+++.... ...++++.
T Consensus 517 d~ik~~~G~~V~p~~IE~-~l~~~p~V~~~~V~G~~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 595 (660)
T PLN02430 517 NLIKLSQGEYVALEYLEN-VYGQNPIVEDIWVYGDSFKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILS 595 (660)
T ss_pred ccEEcCCCcEEchHHHHH-HHhcCCCeeEEEEEecCCcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHH
Confidence 99996 699999999999 89999999999999854 57888888642111 00112222
Q ss_pred -H----HHHHhhhcCceeeEEEEECCCCc-----cCCCchhhhHHHHHHHHHcCCCChhhhhcC
Q psy14338 1707 -V----TNAVLEEHHLIVGVAVVVDPGVV-----PINSRGEKQRMHLRDGFLADQLDPIYVAYN 1760 (1761)
Q Consensus 1707 -l----~~~~Lp~~~~vP~~i~~v~~~~l-----P~t~~GKvdR~~L~~~~~~~~~~~~~~~~~ 1760 (1761)
+ ++..|+ .|..++.|.+++. .| .+|+++|+.|+.+.+.| +.+++++|..++
T Consensus 596 ~i~~~~~~~~l~-~~e~i~~~~l~~~-~~~~~~g~lT~t~K~~R~~i~~~y-~~~i~~ly~~~~ 656 (660)
T PLN02430 596 ELKSTAEKNKLR-GFEYIKGVILETK-PFDVERDLVTATLKKRRNNLLKYY-QVEIDEMYRKLA 656 (660)
T ss_pred HHHHHHHHhCCC-CceeeeEEEEECC-CCCCcCCcCChhhhhhhHHHHHHH-HHHHHHHHHhhh
Confidence 2 222377 8999999988873 33 48999999999999999 668889987653
|
|
| >PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-55 Score=553.30 Aligned_cols=423 Identities=14% Similarity=0.126 Sum_probs=345.3
Q ss_pred eeCHHHHHHHHHHHHHHHHhhcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhc
Q psy14338 1198 LLTCSQLHKRAERVGALLLERAKI-NTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVS 1276 (1761)
Q Consensus 1198 ~lTY~eL~~~a~~lA~~L~~~~Gv-~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~ 1276 (1761)
-+.|+||.++++++|+.|++. |+ ++|++|+++++|+++++++++||+++|++++|++|.+|.+ +++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~-g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~------~~~~~~~~~ 91 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQL-ATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQ------EWQQVLNLV 91 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHh-cCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHH------HHHHHHHhc
Confidence 478999999999999999999 88 5799999999999999999999999999999999988777 999999999
Q ss_pred CCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHH
Q psy14338 1277 KSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTS 1356 (1761)
Q Consensus 1277 ~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~ 1356 (1761)
++++++++....... .. .. .. ......+++.++++|||||||.||||++||+++.+
T Consensus 92 ~~~~~i~~~~~~~~~-------------~~----~~--~~-----~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~ 147 (452)
T PRK07445 92 QPDQIWGLDQLKLSH-------------PP----PL--PS-----QGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTA 147 (452)
T ss_pred CCCEEEecCcccccc-------------CC----CC--Cc-----cccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHH
Confidence 999999876532100 00 00 00 01123568999999999999999999999999999
Q ss_pred HHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHH
Q psy14338 1357 LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELC 1436 (1761)
Q Consensus 1357 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l 1436 (1761)
.+.+....+++.+ ++.+.++|++|.+|+ ..++.+|+.|+++++.+.. +.........++++|+++++|++++.+
T Consensus 148 ~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~----~~~~~~~~~~~~~~t~~~~vP~~l~~l 221 (452)
T PRK07445 148 SVQGFQRYFQLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYK----RLKSGQELPPNPSDFFLSLVPTQLQRL 221 (452)
T ss_pred HHHHHHHHhcCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChH----hccchhhhhhhcCceEEEehHHHHHHH
Confidence 9888888887765 457788888888887 5688999999999998732 122223344578999999999999998
Q ss_pred HhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeE
Q psy14338 1437 TKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVY 1516 (1761)
Q Consensus 1437 ~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~ 1516 (1761)
++. ....+++||.+++||+++++ .+.+++.+ .| ..+++.||+||++..+.... +.
T Consensus 222 ~~~----------~~~~l~~l~~i~~gG~~l~~-~~~~~~~~----~~---~~l~~~YG~TE~~~~~~~~~--~~----- 276 (452)
T PRK07445 222 LQL----------RPQWLAQFRTILLGGAPAWP-SLLEQARQ----LQ---LRLAPTYGMTETASQIATLK--PD----- 276 (452)
T ss_pred Hhh----------ChhhhhcceEEEECCccCCH-HHHHHHHh----cC---CeEecCcchhhhcccccccC--ch-----
Confidence 651 23357899999999999998 66666543 23 46999999999764332110 00
Q ss_pred ecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHh
Q psy14338 1517 VDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQF 1596 (1761)
Q Consensus 1517 ~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F 1596 (1761)
. ......++|+|++|++++|+ .|+.|||+|+|++++.||++ ++.
T Consensus 277 ----~--------------~~~~~~~~G~~~p~~~v~i~---------~g~~Gel~v~g~~~~~gY~~---~~~------ 320 (452)
T PRK07445 277 ----D--------------FLAGNNSSGQVLPHAQITIP---------ANQTGNITIQAQSLALGYYP---QIL------ 320 (452)
T ss_pred ----h--------------hccCCCcCCccCCCCeEEEc---------CCCcceEEEeCCccchhhcC---Ccc------
Confidence 0 00012358999999999997 35679999999999999997 431
Q ss_pred hhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcc
Q psy14338 1597 SARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIA 1676 (1761)
Q Consensus 1597 ~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~ 1676 (1761)
..+|||+|||+|++ |+| |+ ++|.||+||+||++|+||+|.|||+ ++.+||+|.
T Consensus 321 --------~~~g~~~TGDl~~~------d~d--------G~----l~~~GR~dd~I~~~G~~V~p~eIE~-~l~~~p~V~ 373 (452)
T PRK07445 321 --------DSQGIFETDDLGYL------DAQ--------GY----LHILGRNSQKIITGGENVYPAEVEA-AILATGLVQ 373 (452)
T ss_pred --------CCCCEEECCCEEEE------cCC--------CC----EEEEeecCCEEEECCEEECHHHHHH-HHHhCCCcc
Confidence 24689999999999 999 99 9999999999999999999999999 899999999
Q ss_pred eeEEEee-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1677 ECAVFTW-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1677 ~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+|+|++. ++.++++++......+.++++++|+++ |+ .|++|+.+++++ +||+|++||++|++|++++.+
T Consensus 374 ~a~V~g~~~~~~g~~~~a~vv~~~~~~~~~~l~~~~~~~-L~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~~ 447 (452)
T PRK07445 374 DVCVLGLPDPHWGEVVTAIYVPKDPSISLEELKTAIKDQ-LS-PFKQPKHWIPVP--QLPRNPQGKINRQQLQQIAVQ 447 (452)
T ss_pred eEEEEeccCcCCCcEEEEEEEeCCCCCCHHHHHHHHHHh-CC-cccCCeEEEEec--CCCCCCCcccCHHHHHHHHHH
Confidence 9999974 457888888765556678999999997 88 999999999999 999999999999999998743
|
|
| >PRK07008 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-55 Score=566.29 Aligned_cols=494 Identities=19% Similarity=0.198 Sum_probs=379.2
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
..+|++.++.+.. ..+.+.+||.||+++++++|++|.+. |+++||+|+++++|++++++++|||+++|++++|++|.+
T Consensus 21 ~~~~~~~~~~~~~-~~~~~~~Ty~el~~~~~~~a~~L~~~-g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~ 98 (539)
T PRK07008 21 RHAGDTEIVSRRV-EGDIHRYTYRDCERRAKQLAQALAAL-GVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINPRL 98 (539)
T ss_pred hhCCCceEEEeec-cCcceEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccccc
Confidence 3568877776321 12346899999999999999999999 999999999999999999999999999999999999987
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccc-----cccccCCc-------cccCCCCccc-hhhhccCC
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNV-----VDIKSWPT-------ILDTDDMPKK-KLAALYRA 1325 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~-----~~~~~~~~-------~~~~~~~~~~-~~~~~~~~ 1325 (1761)
|.+ ++.++++++++++++++.+....+........ +....... .+...+.... ........
T Consensus 99 ~~~------~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 172 (539)
T PRK07008 99 FPE------QIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQDGDYDWPR 172 (539)
T ss_pred CHH------HHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcccCCCcCccc
Confidence 777 99999999999999999876554433211100 00000000 0000000000 00001123
Q ss_pred CCCCCEEEEEeccCCCCCCceEEccHHHHHHHHH--HHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeC
Q psy14338 1326 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR--SMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 1403 (1761)
Q Consensus 1326 ~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~ 1403 (1761)
..+++.++++|||||||.||||+++|++++.... .....+++.++|+++...|++|..++ ..++.++..|+++++.+
T Consensus 173 ~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l~~G~~~~~~~ 251 (539)
T PRK07008 173 FDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAW-GLPYSAPLTGAKLVLPG 251 (539)
T ss_pred CCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhH-HHHHHHHhcCceEEEec
Confidence 4678899999999999999999999999875432 33346788888999888888776554 44577899999999976
Q ss_pred CCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhC
Q psy14338 1404 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 1483 (1761)
Q Consensus 1404 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~ 1483 (1761)
. .+++..+++.++++++|++.++|+++..+++.. .....++++||.+++||+++++ .+.++|.+.+.
T Consensus 252 ~---~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~-------~~~~~~~~~l~~~~~~G~~l~~-~~~~~~~~~~~-- 318 (539)
T PRK07008 252 P---DLDGKSLYELIEAERVTFSAGVPTVWLGLLNHM-------REAGLRFSTLRRTVIGGSACPP-AMIRTFEDEYG-- 318 (539)
T ss_pred C---CcCHHHHHHHHHHcCCEEEEechHHHHHHHhcc-------cccCCCcccceEEEEcCCCCCH-HHHHHHHHHhC--
Confidence 5 479999999999999999999999999997642 1234568899999999999999 78888877663
Q ss_pred CCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCC
Q psy14338 1484 GLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQC 1563 (1761)
Q Consensus 1484 g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~ 1563 (1761)
..+++.||+||++..+.......... .... ........++|+|++|++++|+|++ ++++
T Consensus 319 ----~~l~~~YG~tE~~~~~~~~~~~~~~~-------~~~~---------~~~~~~~~~~G~p~pg~~~~i~d~~-~~~~ 377 (539)
T PRK07008 319 ----VEVIHAWGMTEMSPLGTLCKLKWKHS-------QLPL---------DEQRKLLEKQGRVIYGVDMKIVGDD-GREL 377 (539)
T ss_pred ----Cceecccccccccccceecccccccc-------cCCc---------hhhhhhcccCCccccceEEEEECCC-CCcc
Confidence 46999999999875433211000000 0000 0000113459999999999999965 7788
Q ss_pred CCC--cceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1564 GDS--HLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1564 p~G--~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
|.+ ++|||+++|++++.||++ +++ ..| .+|||+|||+|++ |+| |+
T Consensus 378 ~~~~~~~Gei~v~g~~~~~gy~~---~~~---~~~---------~~g~~~TGD~~~~------~~d--------g~---- 424 (539)
T PRK07008 378 PWDGKAFGDLQVRGPWVIDRYFR---GDA---SPL---------VDGWFPTGDVATI------DAD--------GF---- 424 (539)
T ss_pred CCCCCcceEEEEeCCccchhhcC---Chh---hhh---------cCCCcccCceEEE------cCC--------Cc----
Confidence 754 579999999999999998 772 333 2579999999999 999 99
Q ss_pred EEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhc
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNAVLEEH 1715 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~ 1715 (1761)
++++||+||+||++|++|+|.|||+ ++..||.|.+++|++. ++.++++|+.. +...+.++++++++++ |+ .
T Consensus 425 l~~~GR~~d~i~~~G~~v~p~eIE~-~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-~ 501 (539)
T PRK07008 425 MQITDRSKDVIKSGGEWISSIDIEN-VAVAHPAVAEAACIACAHPKWDERPLLVVVKRPGAEVTREELLAFYEGK-VA-K 501 (539)
T ss_pred EEEeecccCEEEeCCeEEcHHHHHH-HHHhCCceeEEEEEecCCchhccceEEEEEeCCCCccCHHHHHHHHHhh-cc-c
Confidence 9999999999999999999999999 8999999999999974 34667776653 3445678999999997 88 9
Q ss_pred CceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCC
Q psy14338 1716 HLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 1753 (1761)
Q Consensus 1716 ~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~ 1753 (1761)
|++|..|++++ +||+|++||++|++|++.+.+-.++
T Consensus 502 ~~~P~~i~~v~--~lP~t~sgKi~r~~l~~~~~~~~~~ 537 (539)
T PRK07008 502 WWIPDDVVFVD--AIPHTATGKLQKLKLREQFRDYVLP 537 (539)
T ss_pred ccCCeEEEEec--CCCCCCccceeHHHHHHHHHhhccc
Confidence 99999999999 9999999999999999988665443
|
|
| >PLN03051 acyl-activating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-55 Score=560.91 Aligned_cols=446 Identities=16% Similarity=0.129 Sum_probs=329.7
Q ss_pred cCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH------HHHHhhhcc---ccccc
Q psy14338 1231 FPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV------IKLLKSKEA---SNVVD 1301 (1761)
Q Consensus 1231 ~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~------~~~~~~~~~---~~~~~ 1301 (1761)
++|++++++++|||+++|+++||++|.++.+ ++++++++++++++|+++.. ...+..... ...+.
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~------el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 74 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAK------EIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIV 74 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHH------HHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEE
Confidence 5899999999999999999999999988777 99999999999999997642 111111100 00000
Q ss_pred c---------------ccCCccccCCCCcc--chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHH
Q psy14338 1302 I---------------KSWPTILDTDDMPK--KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA 1364 (1761)
Q Consensus 1302 ~---------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~ 1364 (1761)
. ..+..+........ ...........++++++|+|||||||.||||+++|++++..+......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~ 154 (499)
T PLN03051 75 LPAAGEPVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAH 154 (499)
T ss_pred EeccCcccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHh
Confidence 0 00111000000000 000000112356899999999999999999999999988877666677
Q ss_pred cCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCc
Q psy14338 1365 CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSI 1444 (1761)
Q Consensus 1365 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~ 1444 (1761)
+++.++|+++..+|++|..+. ..++.+|+.|+++++.+. .+++..+++.|+++++|+++++|+++..|++..
T Consensus 155 ~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~---~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~---- 226 (499)
T PLN03051 155 MDIQPGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGG---APLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTG---- 226 (499)
T ss_pred cCCCCCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCC---CCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcC----
Confidence 888899999999999998886 568889999999999874 357899999999999999999999999986521
Q ss_pred chhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEeccccccc
Q psy14338 1445 PQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRN 1524 (1761)
Q Consensus 1445 ~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~ 1524 (1761)
.......++++||.+++||+++++ .+.+++.+.+ .+| ..+++.||+||++..+..... . .
T Consensus 227 -~~~~~~~~~~~Lr~i~~gG~~~~~-~~~~~~~~~~-~~~---~~~~~~YG~TE~~~~~~~~~~--~-----------~- 286 (499)
T PLN03051 227 -AFAMEGLDWSKLRVFASTGEASAV-DDVLWLSSVR-GYY---KPVIEYCGGTELASGYISSTL--L-----------Q- 286 (499)
T ss_pred -ccccccCCchhheEEEecCCCCCH-HHHHHHHHhc-ccc---ceeEeeeccccccceeecccc--c-----------C-
Confidence 000234568899999999999998 6666666532 122 468999999997532211100 0 0
Q ss_pred CcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCC--cceEEEEcCCcc--cccccCCCCChhhhHHHhhhhc
Q psy14338 1525 DRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDS--HLGEIWVQSPHN--ASGYFSLYGDESEYAQQFSARL 1600 (1761)
Q Consensus 1525 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G--~~GEL~i~g~~v--~~GY~~~~~~p~~t~~~F~~~p 1600 (1761)
..+.+++|+|++|++++|+|++ ++++|.| ++|||+|+|+.+ +.|||| ++ .++..|..+|
T Consensus 287 ------------~~~~~~~G~p~~~~~~~ivd~~-g~~~~~g~~~~Gel~v~g~~~~~~~gy~~---~~-~~~~~~~g~~ 349 (499)
T PLN03051 287 ------------PQAPGAFSTASLGTRFVLLNDN-GVPYPDDQPCVGEVALAPPMLGASDRLLN---AD-HDKVYYKGMP 349 (499)
T ss_pred ------------CCCCccccCCCCCceEEEECCC-CCCCCCCCCcceEEEEecCcCCCCccccC---Cc-ccceeeecCC
Confidence 0012459999999999999955 8899998 589999999976 589997 65 3432232234
Q ss_pred ccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHh-ccCcceeE
Q psy14338 1601 VTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRA-HKKIAECA 1679 (1761)
Q Consensus 1601 ~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~-~p~V~~a~ 1679 (1761)
+....+.+||||||+|++ |+| |+ |+|+||+|||||++|+||+|.|||+ +|.+ ||+|.+|+
T Consensus 350 ~~~~~~~~~~~TGDlg~~------d~d--------G~----l~~~gR~~d~ik~~G~~v~p~EIE~-~l~~~~p~V~~aa 410 (499)
T PLN03051 350 MYGSKGMPLRRHGDIMKR------TPG--------GY----FCVQGRADDTMNLGGIKTSSVEIER-ACDRAVAGIAETA 410 (499)
T ss_pred ccccCCcceeecCCeEEE------CCC--------Cc----EEEEeccCCEEeeCCEECCHHHHHH-HHHhcCCCcceEE
Confidence 332345679999999999 999 99 9999999999999999999999999 8875 99999999
Q ss_pred EEee-----C-CeEEEEE---EeCCC--chhHhhHHHHHHHH---HhhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1680 VFTW-----T-NLLVVVV---ELDGN--ESEALDLVPLVTNA---VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1680 Vv~~-----~-~~~~a~v---~~~~~--~~~~~~l~~~l~~~---~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
|++. + +.+++|| +.+.. ..+.++++++|+++ .|+ .|+.|..|++++ +||+|++|||+|++|++
T Consensus 411 vvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~-~~~~~~~i~~v~--~lP~t~~GKi~r~~L~~ 487 (499)
T PLN03051 411 AVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLN-PLFKVSRVKIVP--ELPRNASNKLLRRVLRD 487 (499)
T ss_pred EEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcC-CccCCceEEEcC--CCCCCCCccHHHHHHHH
Confidence 9974 3 4688887 55322 34567777777543 265 444455799999 99999999999999998
Q ss_pred HHHc
Q psy14338 1746 GFLA 1749 (1761)
Q Consensus 1746 ~~~~ 1749 (1761)
.+.+
T Consensus 488 ~~~~ 491 (499)
T PLN03051 488 QLKK 491 (499)
T ss_pred HHHH
Confidence 7743
|
|
| >TIGR03205 pimA dicarboxylate--CoA ligase PimA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-54 Score=564.06 Aligned_cols=485 Identities=18% Similarity=0.192 Sum_probs=380.3
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+.+. ++|+++|+. .+++.+||.||.++++++|++|.+. |+++|++|+++++|++++++++|
T Consensus 21 ~~~~~~~~~~~~-----~~p~~~a~~-----~~~~~~ty~el~~~~~~~a~~L~~~-gi~~g~~V~i~~~~~~~~~~~~l 89 (541)
T TIGR03205 21 GTLPDLLSKAAA-----DYGPRPALE-----FRDRPITYTELEAMAETAAAALLRA-GYGKDASVALYLGNTPDHPINFF 89 (541)
T ss_pred CCHHHHHHHHHH-----HcCCCceEE-----ECCcEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCChHHHHHHH
Confidence 356666665554 679999998 5678999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH--HHHHhhhccc----c--ccccccCCcccc----
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV--IKLLKSKEAS----N--VVDIKSWPTILD---- 1310 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~--~~~~~~~~~~----~--~~~~~~~~~~~~---- 1310 (1761)
||+++|++++|++|.+|.. ++.+++++++++++|+++.. .......... . +.....+.....
T Consensus 90 a~~~~G~~~v~l~~~~~~~------~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (541)
T TIGR03205 90 GALKAGARVVHLSPLDGER------ALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAP 163 (541)
T ss_pred HHHhcCeEEEecCCCCCHH------HHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccc
Confidence 9999999999999988777 99999999999999997531 1111110000 0 000000000000
Q ss_pred -CCCCc---------cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc------CcCCCCeEE
Q psy14338 1311 -TDDMP---------KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC------ELYPSRHIA 1374 (1761)
Q Consensus 1311 -~~~~~---------~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~------~~~~~d~~~ 1374 (1761)
..... ............++++++++|||||||.||||+++|+++.+..... ..+ .....++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l 242 (541)
T TIGR03205 164 IPADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVI 242 (541)
T ss_pred cCCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEE
Confidence 00000 0000011123467899999999999999999999999988765432 222 223346788
Q ss_pred EEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCC
Q psy14338 1375 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIAL 1454 (1761)
Q Consensus 1375 ~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l 1454 (1761)
...+++|.+++...++.++..|+++++.+. +++..+++.|+++++|++.++|+++..+++. ......++
T Consensus 243 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------~~~~~~~~ 311 (541)
T TIGR03205 243 CVLPLFHIYALTVILLRSLRRGDLISLHQR----FDVAAVFRDIEEKRATVFPGVPTMWIALAND-------PSLEKRDL 311 (541)
T ss_pred EeccHHHHHHHHHHHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCeEeechHHHHHHHHhC-------ccccccCc
Confidence 888888888877778889999999888753 6899999999999999999999999988652 11234467
Q ss_pred CcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCC
Q psy14338 1455 GCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGS 1534 (1761)
Q Consensus 1455 ~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1534 (1761)
+++|.+++||+++++ .+.+++.+.++ ..+++.||+||++..+.......
T Consensus 312 ~~l~~i~~gg~~~~~-~~~~~~~~~~~------~~~~~~YG~TE~~~~~~~~~~~~------------------------ 360 (541)
T TIGR03205 312 SSLATIGSGGAPLPV-EVANFFERKTG------LKLKSGWGMTETCSPGTGHPPEG------------------------ 360 (541)
T ss_pred cccceEEEccccCCH-HHHHHHHHHhC------CCeecccccccCCcccccCCCCC------------------------
Confidence 899999999999998 78787777653 46999999999765432211000
Q ss_pred CCccceeccccccCCcEEEEEc-CCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeC
Q psy14338 1535 PHSLCLLESGKLLPGVKVIIAN-PETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTG 1613 (1761)
Q Consensus 1535 ~~~~~~~~iG~p~~~~~~~v~d-~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTG 1613 (1761)
.....++|+|++++.++|++ ++.+++++.|+.|||+|+|++++.||+| +|+.|++.|. .+||+||
T Consensus 361 --~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~---~~~~~~~~~~---------~~~~~TG 426 (541)
T TIGR03205 361 --PDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWN---RPEESAEAFV---------GDRFLTG 426 (541)
T ss_pred --CCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccC---ChhhhHhhhc---------cCCcccC
Confidence 00123599999999998864 2457899999999999999999999999 9999999982 4799999
Q ss_pred ceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEE
Q psy14338 1614 YLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLV 1688 (1761)
Q Consensus 1614 Dlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~ 1688 (1761)
|++++ ++| |+ ++|+||.||+||++|+||+|.|||+ ++.+|++|.+++|++. ++.++
T Consensus 427 D~~~~------~~~--------g~----l~i~GR~~~~i~~~G~~i~~~eIE~-~l~~~~~v~~~~v~~~~~~~~~~~~~ 487 (541)
T TIGR03205 427 DIGYM------DTD--------GY----FFLVDRKKDMIISGGFNVYPQMIEQ-AIYEHPGVQEVIVIGIPDQYRGEAAK 487 (541)
T ss_pred ceEEE------cCC--------ce----EEEEccccCeEEECCEEECHHHHHH-HHHhCCCeeeEEEEecCCcccCceEE
Confidence 99999 899 99 9999999999999999999999999 8999999999999974 45778
Q ss_pred EEEEeCCC--chhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHH
Q psy14338 1689 VVVELDGN--ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 1744 (1761)
Q Consensus 1689 a~v~~~~~--~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~ 1744 (1761)
+++++... ..+.++++++++++ |+ .|++|..|++++ +||+|++||++|++|+
T Consensus 488 ~~v~~~~~~~~~~~~~l~~~~~~~-l~-~~~~P~~i~~~~--~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 488 AFVKLRPGAKPFSLDELRAFLAGK-LG-KHELPVAVEFVD--ELPRTPVGKLSRHELR 541 (541)
T ss_pred EEEEECCCCCcCCHHHHHHHHHhh-cc-cccCCcEEEEec--cCCCCcccceeHhhcC
Confidence 88876533 24667899999997 88 899999999999 9999999999999874
|
PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids. |
| >PRK12582 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-55 Score=577.07 Aligned_cols=516 Identities=14% Similarity=0.129 Sum_probs=379.9
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccC-CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDT-RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICA 1240 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~-~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva 1240 (1761)
..++++.|.+++. ++||++|+++.+. ....+.+||+||.++++++|++|.+. |+++||+|+++++|+++++++
T Consensus 48 ~~~l~~~l~~~a~-----~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~~ 121 (624)
T PRK12582 48 PRSIPHLLAKWAA-----EAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDL-GLDPGRPVMILSGNSIEHALM 121 (624)
T ss_pred ccCHHHHHHHHHH-----HCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEecCCCHHHHHH
Confidence 3456666666554 7799999985332 12237899999999999999999998 999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH--HHHHhhhcc--ccccccc---------cCCc
Q psy14338 1241 FYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV--IKLLKSKEA--SNVVDIK---------SWPT 1307 (1761)
Q Consensus 1241 ~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~--~~~~~~~~~--~~~~~~~---------~~~~ 1307 (1761)
+|||+++|++++|++|.++.. ....+++.+++++++++++|++... ...+..... ...+... .+.+
T Consensus 122 ~lA~~~~G~v~vpl~p~~~~~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 200 (624)
T PRK12582 122 TLAAMQAGVPAAPVSPAYSLM-SHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAFAD 200 (624)
T ss_pred HHHHHHcCCeEeeccCccccc-cCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccHHH
Confidence 999999999999999987752 1223499999999999999997642 111111110 0011100 0000
Q ss_pred cccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCC---CCeEEEEeCCccChh
Q psy14338 1308 ILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYP---SRHIALCLDPYCGLG 1384 (1761)
Q Consensus 1308 ~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~ 1384 (1761)
+.... .............++++++|+|||||||.||||+++|+++++.+......+.... .++.+.++|++|.++
T Consensus 201 ~~~~~--~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g 278 (624)
T PRK12582 201 LAATP--PTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMG 278 (624)
T ss_pred HhhcC--CcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHh
Confidence 00000 0000001112346789999999999999999999999999988877666655554 468888999999988
Q ss_pred HHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeec
Q psy14338 1385 FALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVA 1464 (1761)
Q Consensus 1385 ~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gG 1464 (1761)
+...++.+|..|+++++.+..........+++.++++++|+++++|+++..|++.+.. .......++++||.+++||
T Consensus 279 ~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~---~~~~~~~~~~slr~i~~gG 355 (624)
T PRK12582 279 GNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEK---DDALRRSFFKNLRLMAYGG 355 (624)
T ss_pred HHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhh---CHHHHHHHhhheeEEEecC
Confidence 8677778999999999876311011234567788999999999999999998764311 0011123478999999999
Q ss_pred CCCChHHHHHHHHHHHh-hCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecc
Q psy14338 1465 EERPRIHLTSAFSKLFS-ALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLES 1543 (1761)
Q Consensus 1465 e~l~~~~l~~~~~~~~~-~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 1543 (1761)
+++++ ++.+++.+++. ..|. ...+++.||+||++.++..... ...+.+++
T Consensus 356 a~l~~-~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~---------------------------~~~~~~sv 406 (624)
T PRK12582 356 ATLSD-DLYERMQALAVRTTGH-RIPFYTGYGATETAPTTTGTHW---------------------------DTERVGLI 406 (624)
T ss_pred CCCCH-HHHHHHHHHHHhhcCC-CceEEeccccccccceeecccC---------------------------CCCCCCCC
Confidence 99999 88888877642 2221 1468999999998654432110 00123459
Q ss_pred ccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEE-eccC
Q psy14338 1544 GKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFL-RRTS 1622 (1761)
Q Consensus 1544 G~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~-~~~~ 1622 (1761)
|+|++|++++|+ |.|++|||+|+|++++.|||| +|+.|++.| ..+|||+|||+|++ .+.
T Consensus 407 G~p~pg~~v~i~--------~~G~~GEl~vrg~~v~~GY~~---~p~~t~~~f--------~~dgw~~TGDlg~~~d~~- 466 (624)
T PRK12582 407 GLPLPGVELKLA--------PVGDKYEVRVKGPNVTPGYHK---DPELTAAAF--------DEEGFYRLGDAARFVDPD- 466 (624)
T ss_pred CcCCCCcEEEEc--------cCCCceEEEEECCcccccccC---Cccchhhhc--------CccCCccccceEEecCCc-
Confidence 999999999985 457889999999999999999 999999999 45799999999998 210
Q ss_pred CCCCCCCCCCCCCCcccceEEEEcccCCeEEe-CCeecChHHHH--HHHHHhccCcceeEEEeeCC-eEEEEEEeCCCc-
Q psy14338 1623 PAGVAGAPVPPGVSKLHDAVFVVGALDETIML-RGMRYHPIDIE--NSVMRAHKKIAECAVFTWTN-LLVVVVELDGNE- 1697 (1761)
Q Consensus 1623 ~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki-~G~rI~~~eIE--~~~l~~~p~V~~a~Vv~~~~-~~~a~v~~~~~~- 1697 (1761)
|+| |+ |+|+||+||+||+ +|++|+|.||| . ++.+||.|.+|+|++.++ .+.++|++....
T Consensus 467 --~~~--------g~----l~i~GR~~d~i~~~~G~~i~p~~iE~e~-~l~~~p~V~~a~VvG~~~~~~g~lv~p~~~~~ 531 (624)
T PRK12582 467 --DPE--------KG----LIFDGRVAEDFKLSTGTWVSVGTLRPDA-VAACSPVIHDAVVAGQDRAFIGLLAWPNPAAC 531 (624)
T ss_pred --CCC--------Cc----eEEeccchhhEecCCCcEechHHHHHHH-HHhcCcchheEEEEcCCCCcEEEEEecCHHHH
Confidence 246 88 9999999999996 69999999885 5 788999999999999776 455565432110
Q ss_pred --------------hhHhhHHHHHHHHHhhhcCc--------eeeEEEEECCCCcc------CCCchhhhHHHHHHHHHc
Q psy14338 1698 --------------SEALDLVPLVTNAVLEEHHL--------IVGVAVVVDPGVVP------INSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1698 --------------~~~~~l~~~l~~~~Lp~~~~--------vP~~i~~v~~~~lP------~t~~GKvdR~~L~~~~~~ 1749 (1761)
.+.++++++++.. |. .++ .|..+++++ ++| +|++||+.|+++.+.| +
T Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-l~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~t~~~~~~R~~~~~~y-~ 606 (624)
T PRK12582 532 RQLAGDPDAAPEDVVKHPAVLAILREG-LS-AHNAEAGGSSSRIARALLMT--EPPSIDAGEITDKGYINQRAVLERR-A 606 (624)
T ss_pred HHHHhcCCCCHHHHhcCHHHHHHHHHH-HH-HHHhhcCCChhheEEEEEeC--CCCCccCCcCCccccccHHHHHHHH-H
Confidence 1335677777765 55 555 999999999 776 5678889999999998 7
Q ss_pred CCCChhhhh
Q psy14338 1750 DQLDPIYVA 1758 (1761)
Q Consensus 1750 ~~~~~~~~~ 1758 (1761)
.+++++|..
T Consensus 607 ~~i~~ly~~ 615 (624)
T PRK12582 607 ALVERLYAE 615 (624)
T ss_pred HHHHHHhcC
Confidence 778888864
|
|
| >COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-54 Score=537.27 Aligned_cols=486 Identities=21% Similarity=0.270 Sum_probs=366.5
Q ss_pred CCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1180 GAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
.+|+.+|+.... ......+||+|+.+++.++|+.|++. |+.+||+|+|++.|+++|+++.+||+.+|++.||+.++..
T Consensus 28 ~~~~~~a~~~~~-~~~~~~~ty~e~~~~v~~~a~gL~~l-g~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~y~t~~ 105 (613)
T COG1022 28 DRPDGVALMYKE-LGGWEAITYRELYERVRALASGLLSL-GIPAGDRVAIFAANRPEWAIADLAILALGAVSVPIYSTST 105 (613)
T ss_pred cCCcceeEeeec-CCcceEeeHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEecCCCCC
Confidence 557877887665 36789999999999999999999999 9978999999999999999999999999999999987554
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechhH-HHHHhhhcccc--cccc---------------ccCCccccCCC----Cccc
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNV-IKLLKSKEASN--VVDI---------------KSWPTILDTDD----MPKK 1317 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~~-~~~~~~~~~~~--~~~~---------------~~~~~~~~~~~----~~~~ 1317 (1761)
. +.++++|+++++++++++... ........... +... ..+........ ....
T Consensus 106 ~------~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (613)
T COG1022 106 P------EQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLFLIDSA 179 (613)
T ss_pred H------HHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhhhhccc
Confidence 4 499999999999999999743 23222221100 0000 00000000000 0000
Q ss_pred hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC-cCCCCeEEEEeCCccChhHHHHHHHHhhcC
Q psy14338 1318 KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE-LYPSRHIALCLDPYCGLGFALWVLSSVYSG 1396 (1761)
Q Consensus 1318 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G 1396 (1761)
.......+..++|+|.|||||||||+|||||+||+|+++++....+.+. +.++|+.++++|+.|.+..++.....+..|
T Consensus 180 ~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g 259 (613)
T COG1022 180 GLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGG 259 (613)
T ss_pred ccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcc
Confidence 0111123568999999999999999999999999999999999999997 999999999999999988865555555555
Q ss_pred ceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhc---------------------------
Q psy14338 1397 HHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKA--------------------------- 1449 (1761)
Q Consensus 1397 ~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~--------------------------- 1449 (1761)
++++.. .++..+++.+++.++|+++.||.+|+.+.+.+.+.+.....
T Consensus 260 ~~~~~~------~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~ 333 (613)
T COG1022 260 VTVLFK------EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPL 333 (613)
T ss_pred eEEEec------CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCc
Confidence 555543 37999999999999999999999999886543222211110
Q ss_pred --------------cCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCcee
Q psy14338 1450 --------------RNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCV 1515 (1761)
Q Consensus 1450 --------------~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~ 1515 (1761)
...--.++|++++||+++++ ++. ..|...| +.+..+||+||++.+++.+.
T Consensus 334 ~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~-~~~----~f~~~lG---i~i~eGYGlTEts~~~~v~~-------- 397 (613)
T COG1022 334 SWLLVADRLVFRKIRDALGGRIRYALSGGAPLSP-ELL----HFFRSLG---IPILEGYGLTETSAVVSVNP-------- 397 (613)
T ss_pred chhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCH-HHH----HHHHHcC---CCeEEEecccccccceEEcc--------
Confidence 00011478999999999999 664 4455556 68999999999876554332
Q ss_pred EecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHH
Q psy14338 1516 YVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQ 1595 (1761)
Q Consensus 1516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~ 1595 (1761)
+.....+++|+|+|+++++|.| + |||+|+||++|+|||+ +|+.|+++
T Consensus 398 -------------------~~~~~~gtvG~p~p~~evKI~d-~----------GEilVRG~~Vm~GYyk---~pe~Taea 444 (613)
T COG1022 398 -------------------PDRFVLGTVGKPLPGIEVKIAD-D----------GEILVRGPNVMKGYYK---NPEATAEA 444 (613)
T ss_pred -------------------ccCcccCCcCCcCCCceEEEcc-C----------ceEEEecchhcchhcC---ChHHHhhh
Confidence 2233456799999999999998 4 9999999999999999 99999999
Q ss_pred hhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEE-eCCeecChHHHHHHHHHhccC
Q psy14338 1596 FSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIM-LRGMRYHPIDIENSVMRAHKK 1674 (1761)
Q Consensus 1596 F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Ik-i~G~rI~~~eIE~~~l~~~p~ 1674 (1761)
| +.+|||+|||+|.+ |+| |+ |.++||+||.|| .+|++|+|..||. .+.++|-
T Consensus 445 f--------~~DGWf~TGDlg~~------d~~--------g~----L~i~gRkK~~i~l~~GknIaP~~IE~-~l~~~~~ 497 (613)
T COG1022 445 F--------TEDGWFRTGDLGEL------DED--------GY----LVITGRKKELIKLSNGKNIAPEPIES-KLAKSPL 497 (613)
T ss_pred c--------cccCCcccCceeEE------cCC--------Cc----EEEeecccceEECCCCcccChHHHHH-HHhcCCC
Confidence 9 57999999999999 999 99 999999999999 5899999999999 8999999
Q ss_pred cceeEEEeeCC-eEEEEEEeCCCchh-------------H------hhHHHHHHHH------HhhhcCceeeEEEEECCC
Q psy14338 1675 IAECAVFTWTN-LLVVVVELDGNESE-------------A------LDLVPLVTNA------VLEEHHLIVGVAVVVDPG 1728 (1761)
Q Consensus 1675 V~~a~Vv~~~~-~~~a~v~~~~~~~~-------------~------~~l~~~l~~~------~Lp~~~~vP~~i~~v~~~ 1728 (1761)
|.+++|++.++ .++|+|++..+... . .++++....+ .+. .+.....++.++.
T Consensus 498 I~qi~vvg~~k~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~-~~E~i~~~~~~~~- 575 (613)
T COG1022 498 IEQICVVGDDKKFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLF-GFEQIKKFVLLPK- 575 (613)
T ss_pred eeEEEEEecCCcceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhccc-chhhhheeeeccc-
Confidence 99999999544 68888887532221 1 1122211111 011 3334444444432
Q ss_pred Ccc-----CCCchhhhHHHHHHHHHcCCCChhhhh
Q psy14338 1729 VVP-----INSRGEKQRMHLRDGFLADQLDPIYVA 1758 (1761)
Q Consensus 1729 ~lP-----~t~~GKvdR~~L~~~~~~~~~~~~~~~ 1758 (1761)
++. +|++-|++|+.+.+.+ .++++.+|..
T Consensus 576 ~~t~~~~~~t~t~klkR~~i~~~~-~~~i~~~y~~ 609 (613)
T COG1022 576 EFTPENGELTPTLKLKRHVILDRY-KDEIEAVYSR 609 (613)
T ss_pred ccccccCccccchhhhHHHHHHhh-hhHHHHHhhc
Confidence 343 5899999999999988 6667777654
|
|
| >PRK08276 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-54 Score=560.79 Aligned_cols=469 Identities=18% Similarity=0.254 Sum_probs=376.4
Q ss_pred EEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhH
Q psy14338 111 ITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQ 190 (1761)
Q Consensus 111 ~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~r 190 (1761)
+.+||+||.++++++|+.|+ +.|+++|++|+++++|+ +++++++|||+++|++++|+++.++.+ +
T Consensus 10 ~~~ty~el~~~v~~~a~~L~--------~~g~~~~~~V~i~~~~~--~~~~~~~la~~~~G~~~~~l~~~~~~~-----~ 74 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLR--------ALGLREGDVVAILLENN--PEFFEVYWAARRSGLYYTPINWHLTAA-----E 74 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEeCCC--HHHHHHHHHHHhcCcEEEecccccCHH-----H
Confidence 58999999999999999999 89999999999999999 999999999999999999999999876 8
Q ss_pred HHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCcceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCC
Q psy14338 191 IGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDR 265 (1761)
Q Consensus 191 l~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGS 265 (1761)
+.+++++++++++++++.....+..... ...+.........+...+...... ........++.|+++|||||
T Consensus 75 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~i~~TSGt 151 (502)
T PRK08276 75 IAYIVDDSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQ---PDTPIADETAGADMLYSSGT 151 (502)
T ss_pred HHHHHhcCCCCEEEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcC---CCCCCCCCCcceEEEECCCC
Confidence 9999999999999998775543322110 000100000000000000000000 01112355778999999999
Q ss_pred CCCceEEEEchHHHHHHH------HHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHH
Q psy14338 266 DGSVMGVTVTRAAMLSHC------RALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASW 339 (1761)
Q Consensus 266 TG~PKgV~~th~~l~~~~------~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l 339 (1761)
||+||||+++|+++.... ......+....+++++..+|++|..++.. .+.++..|+++++.+ .+++..+
T Consensus 152 TG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~----~~~~~~~ 226 (502)
T PRK08276 152 TGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVME----KFDAEEA 226 (502)
T ss_pred CCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcC----CCCHHHH
Confidence 999999999988765332 22222233357789999999999999885 678999999999987 6789999
Q ss_pred HHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccc
Q psy14338 340 MQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSS 417 (1761)
Q Consensus 340 ~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~T 417 (1761)
++.++++++|++.++| +++..++.... ....+++++|.+++| |++++.++.++|.+.+ |. .+++.||+|
T Consensus 227 ~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~~~lr~i~~~--g~~~~~~~~~~~~~~~---~~---~~~~~yG~t 297 (502)
T PRK08276 227 LALIERYRVTHSQLVP-TMFVRMLKLPEEVRARYDVSSLRVAIHA--AAPCPVEVKRAMIDWW---GP---IIHEYYASS 297 (502)
T ss_pred HHHHHHhCCeEEEehH-HHHHHHHhCccccCCCCCcccceEEEec--CCCCCHHHHHHHHHHh---Cc---Hhhhhcccc
Confidence 9999999999999996 47777665442 224567899999999 9999999999999887 43 399999999
Q ss_pred cccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEE
Q psy14338 418 ECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICV 497 (1761)
Q Consensus 418 E~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i 497 (1761)
|++.+++..... .....+++|+|+ ++.++|+|++++ +++.|+.|||++
T Consensus 298 E~~~~~~~~~~~-----------------------------~~~~~~~~G~~~-~~~~~i~d~~~~--~~~~g~~Gel~v 345 (502)
T PRK08276 298 EGGGVTVITSED-----------------------------WLAHPGSVGKAV-LGEVRILDEDGN--ELPPGEIGTVYF 345 (502)
T ss_pred cccceeEecCcc-----------------------------ccccCCCcceec-ccEEEEECCCCC--CCcCCCceEEEE
Confidence 998765543211 012346899999 889999998876 689999999999
Q ss_pred ecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHh
Q psy14338 498 ASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLA 577 (1761)
Q Consensus 498 ~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~ 577 (1761)
+|+.++.||+++|+.|++.|. .++||+|||+|++++||.+++.||+|++||++|++|++.|||..+.+
T Consensus 346 ~~~~~~~gy~~~~~~~~~~~~------------~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~ 413 (502)
T PRK08276 346 EMDGYPFEYHNDPEKTAAARN------------PHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVT 413 (502)
T ss_pred ECCCccchhcCCHHHHHHHhc------------CCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHh
Confidence 999999999999999999985 25899999999999999999999999999999999999999999998
Q ss_pred cCCccccccceEEEEEEec-CCCceEEEEEEeCCCC--C---HHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCC
Q psy14338 578 VEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDC--S---EEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTP 651 (1761)
Q Consensus 578 ~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~--~---~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~ 651 (1761)
++++ .+++|++..+ ..++.+++++++.... + .++++++++++|+.||+|..+ +.++++|+|+
T Consensus 414 ~~~v-----~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i-------~~~~~lP~t~ 481 (502)
T PRK08276 414 HPKV-----ADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGRLAHYKCPRSI-------DFEDELPRTP 481 (502)
T ss_pred CCCc-----ceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhhccCCCCCcEE-------EEecCCCCCc
Confidence 8887 7999999874 4578899999986542 2 247889999999999999986 5569999999
Q ss_pred CCcccHHHHHHHHHcC
Q psy14338 652 LGGIHLSECKRRFLEG 667 (1761)
Q Consensus 652 ~GKidR~~L~~~~~~~ 667 (1761)
|||++|++|++.+...
T Consensus 482 ~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 482 TGKLYKRRLRDRYWEG 497 (502)
T ss_pred ccchhHHHHHHHHHhh
Confidence 9999999999988653
|
|
| >PRK13383 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-54 Score=558.71 Aligned_cols=473 Identities=17% Similarity=0.201 Sum_probs=377.6
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.+++..+.+++. ++|+++|+. ++++.+||+||.++++++|++|++. |+++||+|+++++|++++++++|
T Consensus 35 ~~~~~~~~~~a~-----~~p~~~a~~-----~~~~~lTy~el~~~~~~la~~L~~~-gi~~g~~V~i~~~~~~~~~~~~l 103 (516)
T PRK13383 35 TNPYTLLAVTAA-----RWPGRTAII-----DDDGALSYRELQRATESLARRLTRD-GVAPGRAVGVMCRNGRGFVTAVF 103 (516)
T ss_pred CcHHHHHHHHHH-----HCCCCcEEE-----eCCCcEeHHHHHHHHHHHHHHHHhc-CCCCCCEEEEECCCCHHHHHHHH
Confidence 345555655544 679999998 5667999999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAAL 1322 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1322 (1761)
||+++|++++|++|..|.+ ++.++++++++++++++......+...... ...... ...... ...
T Consensus 104 a~~~~G~v~vpl~~~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~-~~~~~~--~~~~~~-------~~~ 167 (516)
T PRK13383 104 AVGLLGADVVPISTEFRSD------ALAAALRAHHISTVVADNEFAERIAGADDA-VAVIDP--ATAGAE-------ESG 167 (516)
T ss_pred HHHHhCeEEEEcCccCCHH------HHHHHHhcCCCCEEEEchhHHHHHHhhhcc-eEEecc--chhhhh-------cCC
Confidence 9999999999999988777 999999999999999998776554432211 100000 000000 000
Q ss_pred cCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHH--HHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEE
Q psy14338 1323 YRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSL--CRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSI 1400 (1761)
Q Consensus 1323 ~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~v 1400 (1761)
..+..+++.++|+|||||||+||||+++|...... .......+++.++++++..+|++|.+++ ..++.++..|++++
T Consensus 168 ~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~-~~~~~~l~~G~~~~ 246 (516)
T PRK13383 168 GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGL-GMLMLTIALGGTVL 246 (516)
T ss_pred CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhH-HHHHHHHhcCCEEE
Confidence 11123456789999999999999999999843222 2223345678888999999999998887 55788899999998
Q ss_pred EeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHH
Q psy14338 1401 LIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLF 1480 (1761)
Q Consensus 1401 l~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~ 1480 (1761)
+... ++++.+++.++++++|.+.++|+++..+.+.... .....+++++|.+++||+++++ .+.++|.+.+
T Consensus 247 ~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~~~lr~i~~gG~~l~~-~~~~~~~~~~ 316 (516)
T PRK13383 247 THRH----FDAEAALAQASLHRADAFTAVPVVLARILELPPR-----VRARNPLPQLRVVMSSGDRLDP-TLGQRFMDTY 316 (516)
T ss_pred ECCC----CCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccc-----ccccCCCCceEEEEECCCCCCH-HHHHHHHHHc
Confidence 8763 7899999999999999999999999998763210 1122357899999999999999 7878887766
Q ss_pred hhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCC
Q psy14338 1481 SALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETK 1560 (1761)
Q Consensus 1481 ~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~ 1560 (1761)
+ ..+++.||+||++..+...... . .....++|+|++|++++|+|++ +
T Consensus 317 g------~~v~~~YG~tE~~~~~~~~~~~------------~--------------~~~~~~~G~~~~~~~~~i~d~~-~ 363 (516)
T PRK13383 317 G------DILYNGYGSTEVGIGALATPAD------------L--------------RDAPETVGKPVAGCPVRILDRN-N 363 (516)
T ss_pred C------chhhhcccccccccceeccccc------------c--------------ccCCCcccCCCCCcEEEEECCC-C
Confidence 3 4699999999986543221100 0 0012359999999999999965 8
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccc
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHD 1640 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~ 1640 (1761)
++++.|+.|||+|+|+.++.||++ ++. ..+ .+|||+|||+|++ |+| |+
T Consensus 364 ~~~~~g~~Gel~v~g~~~~~~Y~~---~~~---~~~---------~~g~~~TGDl~~~------d~~--------G~--- 411 (516)
T PRK13383 364 RPVGPRVTGRIFVGGELAGTRYTD---GGG---KAV---------VDGMTSTGDMGYL------DNA--------GR--- 411 (516)
T ss_pred CCCCCCCceEEEEecCcccccccC---Cch---hhe---------ecCceecceeEEE------cCC--------cc---
Confidence 999999999999999999999997 543 222 3689999999999 999 99
Q ss_pred eEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHHHHHHhhh
Q psy14338 1641 AVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLVTNAVLEE 1714 (1761)
Q Consensus 1641 ~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~ 1714 (1761)
++++||+||+||++|++|+|.|||. +|.+||+|.+++|++. ++.+.++|+... ...+.++++++++++ |+
T Consensus 412 -l~i~GR~~~~i~~~G~~v~~~eiE~-~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~- 487 (516)
T PRK13383 412 -LFIVGREDDMIISGGENVYPRAVEN-ALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKDR-VS- 487 (516)
T ss_pred -EEEeccccceEEECCEEECHHHHHH-HHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHHh-cc-
Confidence 9999999999999999999999999 8999999999999973 457788887642 334567899999987 87
Q ss_pred cCceeeEEEEECCCCccCCCchhhhHHHHH
Q psy14338 1715 HHLIVGVAVVVDPGVVPINSRGEKQRMHLR 1744 (1761)
Q Consensus 1715 ~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~ 1744 (1761)
.|++|..+++++ +||+|++||++|++|+
T Consensus 488 ~~~~p~~i~~v~--~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 488 RFEQPRDINIVS--SIPRNPTGKVLRKELP 515 (516)
T ss_pred cCCCCcEEEEeC--CCCCCCCCcCcHHHhC
Confidence 899999999999 9999999999999984
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-54 Score=592.73 Aligned_cols=476 Identities=15% Similarity=0.160 Sum_probs=363.0
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+++. ++||++|++ ++++.+||+||+++++++|+.|++. |+++||+|+|+++|++++++++|
T Consensus 447 ~sl~~ll~~~a~-----~~pd~~Al~-----~~~~~lTY~eL~~ra~rlA~~L~~~-Gv~~Gd~VaI~~~n~~e~v~a~l 515 (994)
T PRK07868 447 ISLGRIIAEQAR-----DAPKGEFLL-----FDGRVHTYEAVNRRINNVVRGLIAV-GVRQGDRVGVLMETRPSALVAIA 515 (994)
T ss_pred ccHHHHHHHHHH-----HCCCCeEEE-----eCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHH
Confidence 456777776665 789999999 5678999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccccccc----------CCccccCC
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKS----------WPTILDTD 1312 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 1312 (1761)
||+++|++++||||. + ++.+++++++++++|++......+..... .++.... ........
T Consensus 516 A~~~aGav~vpl~p~---~------~l~~il~~s~~~~li~~~~~~~~~~~~~~-~iiv~~~~~~~~~~~~~~~~~~~~~ 585 (994)
T PRK07868 516 ALSRLGAVAVLMPPD---T------DLAAAVRLGGVTEIITDPTNLEAARQLPG-RVLVLGGGESRDLDLPDDADVIDME 585 (994)
T ss_pred HHHhcCCEEEEeCCc---h------hHHHHHhccCCeEEEEChHHHHHHHhcCc-eEEEecCCccccccCCcchhhhhhh
Confidence 999999999999973 3 89999999999999999776554432211 1111100 00000000
Q ss_pred CCccchh--hh--ccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHH
Q psy14338 1313 DMPKKKL--AA--LYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALW 1388 (1761)
Q Consensus 1313 ~~~~~~~--~~--~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 1388 (1761)
....... +. ......++++|||+|| ||||+||++.++|.+...........+++.++|++++.+|++|++++. .
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~-~ 663 (994)
T PRK07868 586 KIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLL-V 663 (994)
T ss_pred hcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHH-H
Confidence 0000000 00 0011236899999999 578888888888877665555566678899999999999999998884 4
Q ss_pred HHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCC
Q psy14338 1389 VLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP 1468 (1761)
Q Consensus 1389 ~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~ 1468 (1761)
.+.+++.||+.+++.+ .++++.+++.|++++||+++++|++++.+++. ......++++||.++ | +.++
T Consensus 664 ~l~~~l~gG~~vvl~~---~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~-------~~~~~~~~~slr~~~-g-~gl~ 731 (994)
T PRK07868 664 SLGGAVVGGSRIALSR---GLDPDRFVQEVRQYGVTVVSYTWAMLREVVDD-------PAFVLHGNHPVRLFI-G-SGMP 731 (994)
T ss_pred HHHHHhccceEEEecC---CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhC-------cCCccCCCCceEEEe-c-CCCC
Confidence 4445555555554443 37999999999999999999999999999762 112334677899876 3 3488
Q ss_pred hHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccC
Q psy14338 1469 RIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLP 1548 (1761)
Q Consensus 1469 ~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 1548 (1761)
+ .+.++|.+.|+. ..+++.||+||++.+.... . ..+.+++|+|++
T Consensus 732 ~-~l~~~~~~~~~~-----~~l~~~YG~TE~~~~~~~~----~-------------------------~~~~~svG~p~p 776 (994)
T PRK07868 732 T-GLWERVVEAFAP-----AHVVEFFATTDGQAVLANV----S-------------------------GAKIGSKGRPLP 776 (994)
T ss_pred H-HHHHHHHHHhCc-----hheeeeeeccccccccccc----C-------------------------CCCCcccCCccC
Confidence 8 788888887642 5799999999976432110 0 001246999999
Q ss_pred Cc-EEEEE-----------cCCCC--CCCCCCcceEEEEcCCcccccccCCCCChhhhHHH--hhhhcccCCCCCceEee
Q psy14338 1549 GV-KVIIA-----------NPETK--GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQ--FSARLVTGNTGELYART 1612 (1761)
Q Consensus 1549 ~~-~~~v~-----------d~~~~--~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~--F~~~p~~~~~~~~~yrT 1612 (1761)
|+ +++|. | +++ +.++.|++|||+++|++ |+ +|+.+..+ |. +++|||+|
T Consensus 777 g~~~v~i~~~d~~~g~li~d-~~G~~~~~~~ge~Gel~~~~~~----~~----~p~~t~~~~~~~-------~~dgw~~T 840 (994)
T PRK07868 777 GAGRVELAAYDPEHDLILED-DRGFVRRAEVNEVGVLLARARG----PI----DPTASVKRGVFA-------PADTWIST 840 (994)
T ss_pred CCCceeEEEecCcCCceeec-CCceEEEcCCCCceEEEEecCC----CC----ChhhhhHhcccc-------cCCEEEec
Confidence 98 66653 3 235 56899999999999985 44 45554433 41 35899999
Q ss_pred CceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC----CeEE
Q psy14338 1613 GYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT----NLLV 1688 (1761)
Q Consensus 1613 GDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~----~~~~ 1688 (1761)
||+|++ |+| |+ |+|+||+|||||++|+||+|+|||+ +|.+||+|.+|+|++.. +.++
T Consensus 841 GDlg~~------d~d--------G~----l~~~GR~dd~Ik~~G~~I~p~EIE~-~L~~hp~V~~aaVvg~~d~~~~~~~ 901 (994)
T PRK07868 841 EYLFRR------DDD--------GD----YWLVDRRGSVIRTARGPVYTEPVTD-ALGRIGGVDLAVTYGVEVGGRQLAV 901 (994)
T ss_pred cceEEE------cCC--------CC----EEEeccCCCEEEeCCceEcHHHHHH-HHhcCCCeeEEEEEeecCCCCceEE
Confidence 999999 999 99 9999999999999999999999999 99999999999999854 4678
Q ss_pred EEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1689 VVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1689 a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
++|+.. +...+.++|+++|+ + || .||+|+.|++++ +||+|+|||++|++|++.-.
T Consensus 902 a~Vv~~~~~~~~~~~L~~~l~-~-l~-~y~vP~~i~~v~--~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 902 AAVTLRPGAAITAADLTEALA-S-LP-VGLGPDIVHVVP--EIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred EEEEeCCCCcCCHHHHHHHHH-h-CC-CCcCCeEEEEeC--CCCCCccccEehHHHHhcCC
Confidence 888764 34567789999998 4 77 999999999999 99999999999999987643
|
|
| >TIGR02262 benz_CoA_lig benzoate-CoA ligase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-54 Score=557.45 Aligned_cols=475 Identities=17% Similarity=0.230 Sum_probs=385.6
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
..+||++|++ ++++.+||.||.++++++|++|.+. |+++|++|+++++|+.+++++++||+++|++++|++|.+
T Consensus 16 ~~~p~~~a~~-----~~~~~~ty~~l~~~~~~~a~~L~~~-g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~ 89 (508)
T TIGR02262 16 EGRGGKTAFI-----DDISSLSYGELEAQVRRLGAALRRL-GVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALNTLL 89 (508)
T ss_pred cccCCceEEE-----eCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeeccCCC
Confidence 4689999998 6778999999999999999999988 999999999999999999999999999999999999977
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----c-cccccc-CCccccCCC-CccchhhhccCCCCCCCE
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----N-VVDIKS-WPTILDTDD-MPKKKLAALYRAPTAEML 1331 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~-~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 1331 (1761)
+.+ ++.++++.++++++|++......+...... . .+.... ......... ..............++++
T Consensus 90 ~~~------~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (508)
T TIGR02262 90 TAD------DYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATESEQFKPAATQADDP 163 (508)
T ss_pred CHH------HHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCCCccCCCCCCCCCc
Confidence 766 999999999999999998765544332110 0 000000 000000000 000000011123457899
Q ss_pred EEEEeccCCCCCCceEEccHHHHHHHHHH-HHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccC
Q psy14338 1332 AYLDFSVSTTGMLAGIKMSHAAVTSLCRS-MKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVN 1410 (1761)
Q Consensus 1332 a~ii~TSGSTG~PKgV~~sh~~l~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~ 1410 (1761)
++|+|||||||.||||+++|+++...+.. ....+++.++|+++...+++|..++...++.++..|+++++.++ .++
T Consensus 164 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~---~~~ 240 (508)
T TIGR02262 164 AFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGE---RPT 240 (508)
T ss_pred EEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCC---CCC
Confidence 99999999999999999999999887765 56677899999999999999888886678889999999999875 368
Q ss_pred HHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccc
Q psy14338 1411 PALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAV 1490 (1761)
Q Consensus 1411 ~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i 1490 (1761)
+..+++.|+++++|+++++|+++..+++.. ........++|.+++||+++++ .+.+.|.+.++ +.+
T Consensus 241 ~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~-------~~~~~~~~~l~~~~~~G~~l~~-~~~~~~~~~~~------~~v 306 (508)
T TIGR02262 241 PDAVFDRLRRHQPTIFYGVPTLYAAMLADP-------NLPAEDQVRLRLCTSAGEALPA-EVGQRWQARFG------VDI 306 (508)
T ss_pred HHHHHHHHHHHCCcEEecchHHHHHHhcCc-------cccccccccceeEEEcCCCCCH-HHHHHHHHHhC------Cch
Confidence 999999999999999999999998876521 1122346789999999999998 88888887763 579
Q ss_pred cccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceE
Q psy14338 1491 STSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGE 1570 (1761)
Q Consensus 1491 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GE 1570 (1761)
++.||+||++.++..... ......++|+|++|++++|+| ++++++|.|++||
T Consensus 307 ~~~YG~tE~~~~~~~~~~---------------------------~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Ge 358 (508)
T TIGR02262 307 VDGIGSTEMLHIFLSNLP---------------------------GDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGE 358 (508)
T ss_pred hhCccccccCceeecCCc---------------------------cCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeE
Confidence 999999998654332110 001123589999999999999 5589999999999
Q ss_pred EEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCC
Q psy14338 1571 IWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDE 1650 (1761)
Q Consensus 1571 L~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd 1650 (1761)
|+|+|++++.||++ +|+.|++.| .++||+|||++++ ++| |. ++|+||.||
T Consensus 359 l~i~~~~~~~gY~~---~~~~~~~~~---------~~~~~~TGD~~~~------~~~--------g~----~~~~gR~~d 408 (508)
T TIGR02262 359 LLISGPSSATMYWN---NRAKTRDTF---------QGEWTRSGDKYVR------NDD--------GS----YTYAGRTDD 408 (508)
T ss_pred EEEecCccccccCC---CHHHhHhhh---------hcCceeccceEEE------cCC--------cc----EEEeccccc
Confidence 99999999999999 999999888 3589999999999 889 99 999999999
Q ss_pred eEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCC----chhHhhHHHHHHHHHhhhcCceeeE
Q psy14338 1651 TIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN----ESEALDLVPLVTNAVLEEHHLIVGV 1721 (1761)
Q Consensus 1651 ~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~----~~~~~~l~~~l~~~~Lp~~~~vP~~ 1721 (1761)
+||++|.+|+|.|||+ ++.+||+|.++++++.. +++.++++.... ....++++++++++ |+ .|++|..
T Consensus 409 ~i~~~G~~v~~~~ie~-~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~-~~~~p~~ 485 (508)
T TIGR02262 409 MLKVSGIYVSPFEIES-ALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDR-LA-PYKYPRW 485 (508)
T ss_pred eeeeCCEEECHHHHHH-HHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHh-cc-cCCCCce
Confidence 9999999999999999 89999999999999742 467777776322 23356899999987 88 8999999
Q ss_pred EEEECCCCccCCCchhhhHHHHHH
Q psy14338 1722 AVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1722 i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
+++++ ++|+|++||++|++|++
T Consensus 486 i~~~~--~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 486 IVFVD--DLPKTATGKIQRFKLRE 507 (508)
T ss_pred EEEec--CCCCCCCCcEehhhccC
Confidence 99999 99999999999999875
|
Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases. |
| >KOG1256|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=525.32 Aligned_cols=506 Identities=16% Similarity=0.187 Sum_probs=381.9
Q ss_pred cchhHHHHHHHHhhhcCCCcEEEEECC--CCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCC
Q psy14338 79 LPRNLEAAIQRYGSATYKAPVATVLDP--NGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNND 156 (1761)
Q Consensus 79 ~~~~l~~~~~~~a~~~pd~~Av~~~d~--~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~ 156 (1761)
-..|+++.|.+.+..+|+.+++-.... ...+.+.+||.|..+++.+++..|+ ..|+++++.|+|+.-||
T Consensus 73 ~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~--------~lG~~~~~~VGIy~~N~- 143 (691)
T KOG1256|consen 73 GPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLR--------KLGVKEDSKVGIYAFNR- 143 (691)
T ss_pred CcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHH--------HhCCCCCceEEEeccCC-
Confidence 468999999999999999999987652 2223378999999999999999999 88899999999999999
Q ss_pred chhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccc-ccccCcccc-------cccceeccCCC
Q psy14338 157 PINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDA-CLKGLPKTA-------AGEVVAFKGWP 228 (1761)
Q Consensus 157 ~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~-~~~~~~~~~-------~~~~~~~~~~~ 228 (1761)
++|+++.+||..+|++.|||..+++++ -+.+|++.+.+.+|+++.+ ..+.+.+.. ...++.++...
T Consensus 144 -pEWiis~~a~~~~~~v~VplYdTlg~e-----a~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~ 217 (691)
T KOG1256|consen 144 -PEWIISEMACYAYSLVNVPLYDTLGAE-----AVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPS 217 (691)
T ss_pred -hhhHHhHHHHHhcCCEEeecccCCCHH-----HHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCc
Confidence 999999999999999999999999988 5999999999999999943 222221110 11223332221
Q ss_pred c----------ceeEE-eccccCCCCCCCCC-CCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH---HHc---
Q psy14338 229 K----------LTWFV-TEHLAKTPKDWAPQ-PRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT---QAC--- 290 (1761)
Q Consensus 229 ~----------~~~~~-~~~~~~~~~~~~~~-~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~---~~~--- 290 (1761)
. +.... .+............ ..+.|+|+|.|+|||||||+|||||+||+|++..+.... ...
T Consensus 218 ~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~ 297 (691)
T KOG1256|consen 218 DELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAK 297 (691)
T ss_pred hhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhccccc
Confidence 0 11111 11111111111222 467899999999999999999999999999998665321 111
Q ss_pred CCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC-----
Q psy14338 291 HYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT----- 365 (1761)
Q Consensus 291 ~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~----- 365 (1761)
.....|++++++|++|.+.-.. ....++.|+++.+.. .|+..+.+.|++.++|.+..||. ++.++.+.
T Consensus 298 ~~~~~dv~lSyLPLAHi~er~~-~~~~~~~G~~IgF~~-----gD~~~l~~dlk~lkPT~f~~VPR-Vl~riye~I~~~~ 370 (691)
T KOG1256|consen 298 ATVGDDVYLSYLPLAHIFERVV-ELYTFYIGAKIGFAR-----GDILKLTDDLKELKPTVFPGVPR-VLERIYEGIQKQV 370 (691)
T ss_pred ccccCceEEEeCcHHHHHHHHH-HHhHhhcccEEEEec-----CChHHHHHHHHHhCCcEEeccHh-HHHHHHHHHHHHH
Confidence 2234699999999999999885 666779999999987 48899999999999999999986 33222110
Q ss_pred -------------------------CCCC-C--------------CCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCC
Q psy14338 366 -------------------------KDHK-D--------------ISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGL 405 (1761)
Q Consensus 366 -------------------------~~~~-~--------------~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~ 405 (1761)
.... . .--..+|.+++| ++|+++++...++..+ |+
T Consensus 371 ~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sG--aAPls~ev~~F~r~~~---g~ 445 (691)
T KOG1256|consen 371 QKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISG--AAPLSPEVLTFFRAAL---GC 445 (691)
T ss_pred hcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEec--CCCCCHHHHHHHHHhc---Cc
Confidence 0000 0 001368999999 9999999999999987 56
Q ss_pred CCCccccccccccccc-eEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCc
Q psy14338 406 RPDAICPCASSSECLT-VSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPS 484 (1761)
Q Consensus 406 ~~~~l~n~YG~TE~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~ 484 (1761)
+ ++++||+|||+. .++..+++ ...+++|.|+|+++++++|....+
T Consensus 446 ~---v~eGYGlTEts~g~~~~~~~d-------------------------------~~lgsvG~p~p~~~vKL~dvpe~n 491 (691)
T KOG1256|consen 446 R---VLEGYGLTETSAGTTLTLPGD-------------------------------NVLGSVGPPVPGNEVKLVDVPEMN 491 (691)
T ss_pred e---eeecccccccCCceEeccCCC-------------------------------CCCCCcCCcccCceEEEechHHhC
Confidence 4 999999999984 44433322 247899999999999999865433
Q ss_pred ccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEEC-C
Q psy14338 485 YLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVT-G 563 (1761)
Q Consensus 485 ~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~-G 563 (1761)
. -+.|..|||||+|++|+.|||+||++|+++| +++||++|||+|+|+++|.|.++||+|+++|+. |
T Consensus 492 y-~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~i------------deDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqG 558 (691)
T KOG1256|consen 492 Y-DADGSKGEICVRGPNVFMGYYKDPEKTAEAI------------DEDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQG 558 (691)
T ss_pred c-CcCCCcceEEEecchhceeccCChHHHhhhh------------ccccccccccceeECCCccEEEEecccceEEcCCC
Confidence 2 5667789999999999999999999999999 569999999999999999999999999999986 9
Q ss_pred cccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCCCH---------HHHHHHH-------------
Q psy14338 564 RKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDCSE---------EESFQWM------------- 621 (1761)
Q Consensus 564 ~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~~~---------~~l~~~l------------- 621 (1761)
++|.|..||+...+...| .+.+|.+. .....|+|+|+++.+... .+..++|
T Consensus 559 EyVaPe~IEniy~~~~~V-----~qi~V~g~--s~~~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el 631 (691)
T KOG1256|consen 559 EYVAPEKIENIYKRSLPV-----QQIFVLGD--SLRSFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSEL 631 (691)
T ss_pred CccChHHHHHHHhcCCce-----EEEEEECC--cchhcEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHH
Confidence 999999999999887777 57766663 235679999998654221 1111111
Q ss_pred -----HHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 622 -----SRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 622 -----~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+..|..+..-..+.+....|. ++.=-+||+-|+.|..|.+.|..
T Consensus 632 ~~~~~~~~l~~fe~vk~v~l~~~~Fs-ienglltPTlK~KR~~l~~~yk~ 680 (691)
T KOG1256|consen 632 VKVGKENGLKGFEQVKKVHLLPDPFS-IENGLLTPTLKIKRPQLLKYYKK 680 (691)
T ss_pred HHHHhhhhccChhhEeeEEEeccccc-ccCCccchhhhhhhHHHHHHHHH
Confidence 112344444555543333332 45556899999999999988753
|
|
| >PRK08974 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-54 Score=562.77 Aligned_cols=481 Identities=17% Similarity=0.224 Sum_probs=382.3
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHh-hcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLE-RAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~-~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
+++|+++|+. +.++.+||+||.++++++|.+|.+ . |+++|++|+++++|++++++++|||+++|++++|++|.
T Consensus 34 ~~~p~~~a~~-----~~~~~lTy~~l~~~~~~la~~L~~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 107 (560)
T PRK08974 34 ARYADQPAFI-----NMGEVMTFRKLEERSRAFAAYLQNGL-GLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNVNPL 107 (560)
T ss_pred HhCCCCceEE-----ECCccccHHHHHHHHHHHHHHHHHhc-CCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccCcc
Confidence 3779999998 567899999999999999999985 7 99999999999999999999999999999999999998
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc---cccccccCCcccc----------------------CC
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS---NVVDIKSWPTILD----------------------TD 1312 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------------------~~ 1312 (1761)
+|.+ ++.++++++++++++++++....+...... ..+.......... ..
T Consensus 108 ~~~~------~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (560)
T PRK08974 108 YTPR------ELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLP 181 (560)
T ss_pred CCHH------HHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccCC
Confidence 8877 999999999999999987654433322110 0000000000000 00
Q ss_pred CCcc-------c-hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC---cCCCCeEEEEeCCcc
Q psy14338 1313 DMPK-------K-KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE---LYPSRHIALCLDPYC 1381 (1761)
Q Consensus 1313 ~~~~-------~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~---~~~~d~~~~~~~~~~ 1381 (1761)
.... . ..........++++++|+|||||||.||||+++|+++...+......+. ...++.++...+++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 261 (560)
T PRK08974 182 DAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYH 261 (560)
T ss_pred CcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHH
Confidence 0000 0 0000112246789999999999999999999999999887765544432 233456667778888
Q ss_pred ChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEE
Q psy14338 1382 GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCV 1461 (1761)
Q Consensus 1382 ~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~ 1461 (1761)
.+++....+..+..|+++++... ..++..+++.++++++|++..+|++++.+.+.. .....++++||.++
T Consensus 262 ~~~~~~~~~~~l~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------~~~~~~~~~lr~~~ 331 (560)
T PRK08974 262 IFALTVNCLLFIELGGQNLLITN---PRDIPGFVKELKKYPFTAITGVNTLFNALLNNE-------EFQELDFSSLKLSV 331 (560)
T ss_pred HHHHHHHHHHHhhcCCeEEEecC---ccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCc-------CcccCCccceeEEE
Confidence 88876677788899999888754 357899999999999999999999999987631 12345678999999
Q ss_pred eecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCcccee
Q psy14338 1462 VVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLL 1541 (1761)
Q Consensus 1462 ~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1541 (1761)
+||+++++ .+.++|.+.+. ..+++.||+||++.++....... .....
T Consensus 332 ~gg~~~~~-~~~~~~~~~~g------~~~~~~YG~tE~~~~~~~~~~~~--------------------------~~~~~ 378 (560)
T PRK08974 332 GGGMAVQQ-AVAERWVKLTG------QYLLEGYGLTECSPLVSVNPYDL--------------------------DYYSG 378 (560)
T ss_pred ecCccCCH-HHHHHHHHHhC------CcEEeeecccccCceeeccCCCC--------------------------cccCC
Confidence 99999998 78888877653 57999999999776543321100 00123
Q ss_pred ccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEecc
Q psy14338 1542 ESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRT 1621 (1761)
Q Consensus 1542 ~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~ 1621 (1761)
++|+|++|++++|+|++ ++++|.|+.|||+|+|+.+++||++ +++.+++.| .+|||+|||+|++
T Consensus 379 ~~G~~~~~~~~~i~~~~-~~~~~~g~~Gel~v~g~~~~~gy~~---~~~~~~~~~---------~~g~~~TGDl~~~--- 442 (560)
T PRK08974 379 SIGLPVPSTEIKLVDDD-GNEVPPGEPGELWVKGPQVMLGYWQ---RPEATDEVI---------KDGWLATGDIAVM--- 442 (560)
T ss_pred ccccCcCCCEEEEECCC-CCCCCCCCceEEEEecCCcchhhcC---Chhhhhhhh---------hcCCcccCCEEEE---
Confidence 59999999999999965 8999999999999999999999999 999999888 3589999999999
Q ss_pred CCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCC
Q psy14338 1622 SPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN 1696 (1761)
Q Consensus 1622 ~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~ 1696 (1761)
+++ |+ ++|+||+||+||++|++|+|.|||+ ++..||+|.+++|++.. +.++++++....
T Consensus 443 ---~~~--------g~----l~i~GR~~d~i~~~G~~i~~~~IE~-~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~ 506 (560)
T PRK08974 443 ---DEE--------GF----LRIVDRKKDMILVSGFNVYPNEIED-VVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDP 506 (560)
T ss_pred ---cCC--------ce----EEEEecccceEEeCCEEECHHHHHH-HHHhCCCeeEEEEEeeecCCcceEEEEEEECCCC
Confidence 899 99 9999999999999999999999999 89999999999999753 356677765544
Q ss_pred chhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1697 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1697 ~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
..+.+++++++.++ |+ .|++|..+.+++ +||+|++||++|++|++...+.
T Consensus 507 ~~~~~~l~~~l~~~-l~-~~~~P~~~~~~~--~lP~t~~GK~~r~~l~~~~~~~ 556 (560)
T PRK08974 507 SLTEEELITHCRRH-LT-GYKVPKLVEFRD--ELPKSNVGKILRRELRDEARAK 556 (560)
T ss_pred CCCHHHHHHHHHhh-cc-cccCCcEEEEhh--hCCCCCCCcEeHHHHHHHHHhh
Confidence 45667899999987 88 999999999999 9999999999999999987544
|
|
| >PRK06018 putative acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-54 Score=559.82 Aligned_cols=502 Identities=17% Similarity=0.197 Sum_probs=385.3
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++++.|...+. ++|+++++.. +.++..+++||+||.++++++|++|.+. |+++||+|+++++|++++++++||
T Consensus 11 ~~~~~~~~~a~-----~~~~~~~~~~-~~~~~~~~~Ty~el~~~v~~la~~L~~~-g~~~gd~v~i~~~~~~~~~~~~la 83 (542)
T PRK06018 11 LCHRIIDHAAR-----IHGNREVVTR-SVEGPIVRTTYAQIHDRALKVSQALDRD-GIKLGDRVATIAWNTWRHLEAWYG 83 (542)
T ss_pred CHHHHHHHHHH-----hCCCceEEEe-eccCCceEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHH
Confidence 44555555543 7899999974 2113457899999999999999999999 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----cccccccCCccccCCCCc---
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIKSWPTILDTDDMP--- 1315 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--- 1315 (1761)
|+++|++++|++|.+|.+ ++..+++++++++++++......+...... ..+....... ......+
T Consensus 84 ~~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 156 (542)
T PRK06018 84 IMGIGAICHTVNPRLFPE------QIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAH-MPQTTLKNAV 156 (542)
T ss_pred HHhcCeEeeccccccCHH------HHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEeccccc-ccccCccccc
Confidence 999999999999988887 999999999999999998765544332110 0000000000 0000000
Q ss_pred -------cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHH-H-HHHHHHHHcCcCCCCeEEEEeCCccChhHH
Q psy14338 1316 -------KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVT-S-LCRSMKLACELYPSRHIALCLDPYCGLGFA 1386 (1761)
Q Consensus 1316 -------~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~-~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 1386 (1761)
............++++++|+|||||||.||||+++|++.+ + ........+++..+|+++...+++|..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~- 235 (542)
T PRK06018 157 AYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSW- 235 (542)
T ss_pred cHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhh-
Confidence 0000001123456789999999999999999999999743 2 22334567788889999988888887776
Q ss_pred HHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCC
Q psy14338 1387 LWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEE 1466 (1761)
Q Consensus 1387 ~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~ 1466 (1761)
...+.++..|+++++... .+++..+++.++++++|++.++|+++..+++... ....++++||.+++||++
T Consensus 236 ~~~~~~~~~g~~~v~~~~---~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~-------~~~~~~~~lr~~~~~G~~ 305 (542)
T PRK06018 236 GIAFSAPSMGTKLVMPGA---KLDGASVYELLDTEKVTFTAGVPTVWLMLLQYME-------KEGLKLPHLKMVVCGGSA 305 (542)
T ss_pred HHHHhhhhcCceEEccCc---CCCHHHHHHHHHhcCCceeecCcHHHHHHHhccc-------ccCCCcccceEEEEcCCC
Confidence 445678899999988653 4789999999999999999999999999876431 234467899999999999
Q ss_pred CChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccc
Q psy14338 1467 RPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKL 1546 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 1546 (1761)
+++ .+.++|++ +. ..+++.||+||++.+.......... .... .........++|+|
T Consensus 306 l~~-~~~~~~~~-~~------~~~~~~YG~tE~~~~~~~~~~~~~~-------~~~~---------~~~~~~~~~~~G~~ 361 (542)
T PRK06018 306 MPR-SMIKAFED-MG------VEVRHAWGMTEMSPLGTLAALKPPF-------SKLP---------GDARLDVLQKQGYP 361 (542)
T ss_pred CCH-HHHHHHHH-hC------CCeEeeecccccCcccccccCcccc-------ccCC---------chhhhhccccCCCC
Confidence 999 78788877 43 5799999999987544321110000 0000 00000112469999
Q ss_pred cCCcEEEEEcCCCCCCCCCC--cceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCC
Q psy14338 1547 LPGVKVIIANPETKGQCGDS--HLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPA 1624 (1761)
Q Consensus 1547 ~~~~~~~v~d~~~~~~~p~G--~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~ 1624 (1761)
++|++++|+|++ ++++|.+ ..|||+|+|++++.||+| .. ...+ +.++||+|||+|++
T Consensus 362 ~~g~~i~v~d~~-~~~~~~~~~~~Gel~i~g~~~~~gy~~---~~---~~~~--------~~~~~~~TGDl~~~------ 420 (542)
T PRK06018 362 PFGVEMKITDDA-GKELPWDGKTFGRLKVRGPAVAAAYYR---VD---GEIL--------DDDGFFDTGDVATI------ 420 (542)
T ss_pred CCCcEEEEECCC-CCCCCCCCCceeEEEEecCCcchhhhc---Cc---ccEe--------cCCcEEEcCCEEEE------
Confidence 999999999965 7877764 689999999999999996 32 2222 35789999999999
Q ss_pred CCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCch
Q psy14338 1625 GVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNES 1698 (1761)
Q Consensus 1625 d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~ 1698 (1761)
++| |+ ++|+||.||+||++|++|+|.|||. ++.+||+|.+|+|++. ++.+.++|+.. +...
T Consensus 421 ~~~--------g~----~~~~GR~~d~i~~~G~~v~~~eIE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 487 (542)
T PRK06018 421 DAY--------GY----MRITDRSKDVIKSGGEWISSIDLEN-LAVGHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETA 487 (542)
T ss_pred cCC--------cc----EEEEecCCCeEEECCEEECHHHHHH-HHHhCCcceeEEEEeccCCCcCceeEEEEEeCCCCCC
Confidence 999 99 9999999999999999999999999 8999999999999974 45677777764 3445
Q ss_pred hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCC
Q psy14338 1699 EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 1752 (1761)
Q Consensus 1699 ~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~ 1752 (1761)
+.++++++++++ |+ .|++|..+++++ +||+|++||++|++|++.+.+..+
T Consensus 488 ~~~~l~~~~~~~-l~-~~~~P~~i~~v~--~iP~t~~GKi~r~~L~~~~~~~~~ 537 (542)
T PRK06018 488 TREEILKYMDGK-IA-KWWMPDDVAFVD--AIPHTATGKILKTALREQFKDYKL 537 (542)
T ss_pred CHHHHHHHHHhh-Cc-cccCCcEEEEec--cCCCCCcchhhHHHHHHHHhccCC
Confidence 667899999997 88 899999999999 999999999999999999866443
|
|
| >PRK07768 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-53 Score=555.47 Aligned_cols=527 Identities=20% Similarity=0.257 Sum_probs=387.8
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
++.+.+...|..+|+.+|+...+. . +.+||.||+++++++|++|+ +.|+++||+|+|+++|+ ++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~ty~el~~~v~~~a~~L~--------~~g~~~gd~V~l~~~~~--~~~~ 68 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDA--P--VRHTWGEVHERARRIAGGLA--------AAGVGPGDAVAVLAGAP--VEIA 68 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCC--c--eEecHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEECCCc--hHHH
Confidence 477888899999999998866543 2 68999999999999999999 88999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCcc--chhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDA--GSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~--~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
++++||+++|++++|+++..+.++. ..+.+.++++.++++++++++.....+....... . ..+..+.+.
T Consensus 69 ~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------~---~~~~~~~l~ 139 (545)
T PRK07768 69 PTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKG------I---RVLTVADLL 139 (545)
T ss_pred HHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccC------C---ceeehhhhc
Confidence 9999999999999999998876521 0123456788899999999876543222111000 0 000011111
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCC-CeEEEccCCcchhhhHHHHHHHH
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEG-ENMVCVLDFKRETGLWHSVLTSV 318 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~i~~~L 318 (1761)
.... .......+++++||+|||||||+||||+++|+++.+.+......+++.++ |++++++|++|+.++...++.++
T Consensus 140 ~~~~--~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l 217 (545)
T PRK07768 140 AADP--IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPM 217 (545)
T ss_pred ccCC--CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHH
Confidence 1111 11234567999999999999999999999999999998888888888876 89999999999999886577889
Q ss_pred hcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC----CCCCCCCCCceeEEEecCCCccCCHHHHH
Q psy14338 319 LNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT----KDHKDISLSSLRLLLVGDGANPWSLSSCD 394 (1761)
Q Consensus 319 ~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~----~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~ 394 (1761)
..|+++++.++..+..++..+.+.++++++|++..+ +.++..+... ......++++||.+++| |+++++++.+
T Consensus 218 ~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~--g~~~~~~~~~ 294 (545)
T PRK07768 218 YFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAP-NFAYALLARRLRRQAKPGAFDLSSLRFALNG--AEPIDPADVE 294 (545)
T ss_pred HCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECc-hHHHHHHHHHHhccccccCCCchheeeEEec--cCCCCHHHHH
Confidence 999999998753323478899999999999997654 4344333221 11123567899999999 9999999999
Q ss_pred HHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcE
Q psy14338 395 QFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCI 474 (1761)
Q Consensus 395 ~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 474 (1761)
.|.+.....|+++..+++.||+||++..++........... ......+. .................++|+|+++++
T Consensus 295 ~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~g~~ 370 (545)
T PRK07768 295 DLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVD---EVDADLLA-ALRRAVPATKGNTRRLATLGPPLPGLE 370 (545)
T ss_pred HHHHHHHhcCCCcccccccccccccceEEEccCCCCCccee---eechhHhh-ccCceeccCCCCcceEEeccCCCCCCE
Confidence 99886333366545699999999998655433211000000 00000000 000000000111234578999999999
Q ss_pred EEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEec
Q psy14338 475 MTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGS 554 (1761)
Q Consensus 475 ~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR 554 (1761)
++|+|++++ +++.|+.|||+++|+.+++||++.+......+ .++||+|||+|++++||.++|+||
T Consensus 371 ~~i~~~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-------------~~g~~~TGDl~~~~~~g~l~~~GR 435 (545)
T PRK07768 371 VRVVDEDGQ--VLPPRGVGVIELRGESVTPGYLTMDGFIPAQD-------------ADGWLDTGDLGYLTEEGEVVVCGR 435 (545)
T ss_pred EEEECCCCC--CCCCCCEEEEEEccCcccccccCCCCCccccc-------------CCCeeeccceEEEecCCEEEEEcc
Confidence 999998886 58999999999999999999998654433222 368999999999999999999999
Q ss_pred cCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEe--cC-CCceEEEEEEeCCCCCH---HHHHHHHHHHHHHh
Q psy14338 555 RDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIR--VL-RDERICVIAEQRPDCSE---EESFQWMSRVLQAV 628 (1761)
Q Consensus 555 ~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~--~~-~~~~l~a~v~~~~~~~~---~~l~~~l~~~Lp~y 628 (1761)
+||+||++|++|++.|||+.+.+++.+ .+++|+++. +. .++.++++++.....+. .++.+++++.++.+
T Consensus 436 ~~d~i~~~G~~v~~~eiE~~l~~~~~v-----~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~ 510 (545)
T PRK07768 436 VKDVIIMAGRNIYPTDIERAAARVEGV-----RPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEVVAE 510 (545)
T ss_pred ccceEEECCEecCHHHHHHHHHhCccc-----ccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998887 576666654 22 34455555555443333 35667778887765
Q ss_pred --hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 629 --DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 629 --~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
..|..+ .++..+.||+|++||++|++|++.|.
T Consensus 511 ~~~~p~~v-----~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 511 VGVRPRNV-----VVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred hCCCccEE-----EEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 467665 46666799999999999999998764
|
|
| >PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-53 Score=553.19 Aligned_cols=480 Identities=18% Similarity=0.241 Sum_probs=388.3
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
..+|+++|+. .+++.+||+||.++++++|..|.+. |+++|++|+++++++.++++++|||+++|++++|++|.+
T Consensus 13 ~~~p~~~~~~-----~~~~~~t~~~l~~~~~~~a~~l~~~-g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~ 86 (503)
T PRK04813 13 QTQPDFPAYD-----YLGEKLTYGQLKEDSDALAAFIDSL-KLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDVSS 86 (503)
T ss_pred HhCCCceEEE-----eCCcEEeHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCCCC
Confidence 3679999998 6678999999999999999999999 999999999999999999999999999999999999987
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEecc
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSV 1338 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 1338 (1761)
|.+ ++.++++.+++++++++....... .....+ .+..+..... ............++++++++|||
T Consensus 87 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~TS 152 (503)
T PRK04813 87 PAE------RIEMIIEVAKPSLIIATEELPLEI---LGIPVI---TLDELKDIFA--TGNPYDFDHAVKGDDNYYIIFTS 152 (503)
T ss_pred hHH------HHHHHHHhcCCCEEEecccccccc---cCCcEE---ehHHhhhhhh--ccccccccccCCCCCcEEEEECC
Confidence 777 999999999999999987641100 000011 1111100000 00000112234678899999999
Q ss_pred CCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHH
Q psy14338 1339 STTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418 (1761)
Q Consensus 1339 GSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i 1418 (1761)
||||.||||.++|+++...+.+....+++..+++++...|++|..++ ..++.+|..|+++++.+.. ...++..+++.+
T Consensus 153 GTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~~~~-~~~~~~~~~~~~ 230 (503)
T PRK04813 153 GTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVALPKD-MTANFKQLFETL 230 (503)
T ss_pred CCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEcChh-hhcCHHHHHHHH
Confidence 99999999999999999999988888999998888888888887776 6788999999999998853 246899999999
Q ss_pred HhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccc
Q psy14338 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498 (1761)
Q Consensus 1419 ~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE 1498 (1761)
+++++|++.++|++++.++... .....+++++|.++++|+++++ .+.+++.+.++. ..+++.||+||
T Consensus 231 ~~~~~t~~~~~p~~~~~~~~~~-------~~~~~~~~~l~~i~~~G~~l~~-~~~~~~~~~~~~-----~~~~~~yG~tE 297 (503)
T PRK04813 231 PQLPINVWVSTPSFADMCLLDP-------SFNEEHLPNLTHFLFCGEELPH-KTAKKLLERFPS-----ATIYNTYGPTE 297 (503)
T ss_pred HHcCCeEEEeChHHHHHHHHhh-------ccCcccCCCceEEEEecCcCCH-HHHHHHHHHCCC-----ceEEeCcccch
Confidence 9999999999999998875421 1234567899999999999999 788888887642 57999999999
Q ss_pred cceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcc
Q psy14338 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHN 1578 (1761)
Q Consensus 1499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v 1578 (1761)
++..........+ ........++|+|+++++++|+|+ ++.++|.|+.|||+|+|+++
T Consensus 298 ~~~~~~~~~~~~~----------------------~~~~~~~~~~g~~~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~ 354 (503)
T PRK04813 298 ATVAVTSIEITDE----------------------MLDQYKRLPIGYAKPDSPLLIIDE-EGTKLPDGEQGEIVISGPSV 354 (503)
T ss_pred heeEEEEEEeccc----------------------ccccCCCCcccccCCCCEEEEECC-CCCCCCCCCceEEEEecccc
Confidence 7643321111000 000112346999999999999995 48999999999999999999
Q ss_pred cccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCee
Q psy14338 1579 ASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMR 1658 (1761)
Q Consensus 1579 ~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~r 1658 (1761)
+.||++ +++.|.+.|..+ ++.+||+|||+|++ +| |+ +++.||.||+||++|++
T Consensus 355 ~~gy~~---~~~~~~~~~~~~-----~g~~~~~tGD~~~~-------~~--------g~----~~~~GR~~d~i~~~G~~ 407 (503)
T PRK04813 355 SKGYLN---NPEKTAEAFFTF-----DGQPAYHTGDAGYL-------ED--------GL----LFYQGRIDFQIKLNGYR 407 (503)
T ss_pred ccccCC---ChhHhHHhhccC-----CCceeEECCceEEe-------eC--------Ce----EEEeccccceEEECcEE
Confidence 999999 999999988532 35679999999999 46 88 99999999999999999
Q ss_pred cChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchh-----HhhHHHHHHHHHhhhcCceeeEEEEECCC
Q psy14338 1659 YHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESE-----ALDLVPLVTNAVLEEHHLIVGVAVVVDPG 1728 (1761)
Q Consensus 1659 I~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~-----~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~ 1728 (1761)
|+|.|||+ ++..||+|.+++|++. ++.++++++......+ .++++++++++ |+ .|++|..+++++
T Consensus 408 v~~~~iE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~-l~-~~~~P~~i~~~~-- 482 (503)
T PRK04813 408 IELEEIEQ-NLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKER-LM-EYMIPRKFIYRD-- 482 (503)
T ss_pred eCHHHHHH-HHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhh-Cc-cccCCeEEEEec--
Confidence 99999999 8999999999999964 3468888876542222 24588899886 88 999999999999
Q ss_pred CccCCCchhhhHHHHHHHHH
Q psy14338 1729 VVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1729 ~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
+||+|+|||++|++|++.+.
T Consensus 483 ~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 483 SLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred cCCCCCCCCCcHHHHHHHhc
Confidence 99999999999999998873
|
|
| >PLN02479 acetate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-54 Score=560.01 Aligned_cols=490 Identities=18% Similarity=0.202 Sum_probs=371.9
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
..+|+++|+. .+++.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++|||+++|++++|++|..
T Consensus 31 ~~~p~~~a~~-----~~~~~~ty~eL~~~~~~lA~~L~~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~ 104 (567)
T PLN02479 31 VVHPTRKSVV-----HGSVRYTWAQTYQRCRRLASALAKR-SIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVNIRL 104 (567)
T ss_pred hhCCCceEEE-----ECCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEecccc
Confidence 3679999998 5667899999999999999999999 999999999999999999999999999999999999987
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc------------cccccccc-------CCccccCCCC-----
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA------------SNVVDIKS-------WPTILDTDDM----- 1314 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~------------~~~~~~~~-------~~~~~~~~~~----- 1314 (1761)
|.+ ++.+++++++++++|++....+....... ...+.... +.........
T Consensus 105 ~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T PLN02479 105 NAP------TIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKF 178 (567)
T ss_pred CHH------HHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHHHH
Confidence 777 99999999999999998876443322110 00000000 0000000000
Q ss_pred -ccchhh-hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1315 -PKKKLA-ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1315 -~~~~~~-~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
...... ........++.++++|||||||.||||+++|+++..........+++.++++.+..++++|..++....+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~ 258 (567)
T PLN02479 179 LETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGWCFTWTLA 258 (567)
T ss_pred HhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhHHHHHHHH
Confidence 000000 000122345678899999999999999999999887776666778888888888888888887764433445
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHL 1472 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l 1472 (1761)
++.|.+++ +. .+++..+++.++++++|++..+|+++..+.+... .....++++++.++++|+++++ .+
T Consensus 259 ~~~g~~~~-~~----~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~------~~~~~~~~~l~~~~~~G~~~~~-~~ 326 (567)
T PLN02479 259 ALCGTNIC-LR----QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPK------SETILPLPRVVHVMTAGAAPPP-SV 326 (567)
T ss_pred hhcCceEe-cc----CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhh------hcccccccceeEEEEcCCCCCH-HH
Confidence 55555544 44 2689999999999999999999999999876311 0111257889999999999998 77
Q ss_pred HHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE-
Q psy14338 1473 TSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK- 1551 (1761)
Q Consensus 1473 ~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~- 1551 (1761)
.++|.+. | ..+++.||+||+++.+......++. ...... .......++|.+.+|+.
T Consensus 327 ~~~~~~~----~---~~~~~~yG~tE~~~~~~~~~~~~~~-------~~~~~~---------~~~~~~~~~g~~~~g~~~ 383 (567)
T PLN02479 327 LFAMSEK----G---FRVTHTYGLSETYGPSTVCAWKPEW-------DSLPPE---------EQARLNARQGVRYIGLEG 383 (567)
T ss_pred HHHHHhc----C---Cceecccccccccccccceeccccc-------cccCcc---------cccccccccCCCcCCcCc
Confidence 7776553 2 4689999999974332211100000 000000 00000124788888876
Q ss_pred EEEEcCCCCCCCCCC--cceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDS--HLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G--~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
++|+|+++++++|.+ ++|||+++|++++.|||+ +|+.|++.| .++||+|||+|++ |+|
T Consensus 384 ~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~---~~~~t~~~~---------~~g~~~TGDl~~~------~~~-- 443 (567)
T PLN02479 384 LDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLK---NPKANEEAF---------ANGWFHSGDLGVK------HPD-- 443 (567)
T ss_pred eeEEcCCCCcccCCCCCCceEEEEeccchhhhhhc---Ccccccchh---------cCCceecceeEEE------cCC--
Confidence 899997778888864 689999999999999999 999999998 3589999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCC------ch
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN------ES 1698 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~------~~ 1698 (1761)
|+ ++|+||.||+||++|+||+|.|||. ++..||.|.+|+|++.. +.++++++.... ..
T Consensus 444 ------g~----l~~~GR~~d~i~~~G~~v~~~eIE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 512 (567)
T PLN02479 444 ------GY----IEIKDRSKDIIISGGENISSLEVEN-VVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAA 512 (567)
T ss_pred ------cc----EEEeccccceEEeCCEEEcHHHHHH-HHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhh
Confidence 99 9999999999999999999999999 89999999999999853 468888876422 23
Q ss_pred hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1699 EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1699 ~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
..++|+++++++ || .|++|+.+++ + +||+|++||++|+.|++.+...+
T Consensus 513 ~~~~l~~~~~~~-l~-~~~~P~~~~~-~--~iP~t~~gKv~r~~L~~~~~~~~ 560 (567)
T PLN02479 513 LAEDIMKFCRER-LP-AYWVPKSVVF-G--PLPKTATGKIQKHVLRAKAKEMG 560 (567)
T ss_pred hHHHHHHHHHhh-cc-cccCCceEEe-c--cCCCCCccCeeHHHHHHHHHhhC
Confidence 356899999987 88 9999998765 7 79999999999999999876543
|
|
| >PRK12406 long-chain-fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-53 Score=549.19 Aligned_cols=470 Identities=18% Similarity=0.251 Sum_probs=375.0
Q ss_pred CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHH
Q psy14338 1194 SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIV 1273 (1761)
Q Consensus 1194 ~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il 1273 (1761)
.+++.+||.||.++++++|++|.+. |+++|++|+++++|++++++++||++++|++++|++|.+|.+ ++.+++
T Consensus 7 ~~~~~~Ty~el~~~~~~la~~l~~~-g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~------~~~~~l 79 (509)
T PRK12406 7 SGDRRRSFDELAQRAARAAGGLAAL-GVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPE------EIAYIL 79 (509)
T ss_pred ECCeeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHH------HHHHHH
Confidence 5678999999999999999999999 999999999999999999999999999999999999988877 999999
Q ss_pred HhcCCeEEEechhHHHHHhhhccc--cccccccCCccccC---CC----Cccc--------hhhhccCCCCCCCEEEEEe
Q psy14338 1274 DVSKSVLVLSNQNVIKLLKSKEAS--NVVDIKSWPTILDT---DD----MPKK--------KLAALYRAPTAEMLAYLDF 1336 (1761)
Q Consensus 1274 ~~~~~~~vl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~----~~~~--------~~~~~~~~~~~~~~a~ii~ 1336 (1761)
+++++++++++......+...... ..+........... .. .... ..........++++++++|
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~ 159 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPYDGPPVPQPQSMIY 159 (509)
T ss_pred hccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCccCCCCCCCceEEEE
Confidence 999999999987765544322110 00000000000000 00 0000 0001112335789999999
Q ss_pred ccCCCCCCceEEccHHHH---HHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHH
Q psy14338 1337 SVSTTGMLAGIKMSHAAV---TSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPAL 1413 (1761)
Q Consensus 1337 TSGSTG~PKgV~~sh~~l---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~ 1413 (1761)
||||||.||||+++|.+. ..........+++.++++++...+++|..+.. ..+.++..|+++++.+. +++..
T Consensus 160 TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~~~----~~~~~ 234 (509)
T PRK12406 160 TSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNA-YGLRAGRLGGVLVLQPR----FDPEE 234 (509)
T ss_pred CCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHH-HHHHHHhhheEEEEccC----CCHHH
Confidence 999999999999876554 44444556678899999999888888887763 45667889999998874 68999
Q ss_pred HHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccccc
Q psy14338 1414 WLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTS 1493 (1761)
Q Consensus 1414 l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~ 1493 (1761)
+++.++++++|++..+|+++..+++... ......++++||.+++||+++++ .+.+++.+.++ ..+++.
T Consensus 235 ~~~~l~~~~~t~~~~~P~~~~~l~~~~~-----~~~~~~~~~~l~~v~~gg~~~~~-~~~~~~~~~~~------~~~~~~ 302 (509)
T PRK12406 235 LLQLIERHRITHMHMVPTMFIRLLKLPE-----EVRAKYDVSSLRHVIHAAAPCPA-DVKRAMIEWWG------PVIYEY 302 (509)
T ss_pred HHHHHHHcCCeEEEccHHHHHHHHhCch-----hhcccCCCCceeEEEEcCCCCCH-HHHHHHHHHcC------CcEEee
Confidence 9999999999999999999999876311 11234567899999999999998 78888887763 468999
Q ss_pred ccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEE
Q psy14338 1494 FGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWV 1573 (1761)
Q Consensus 1494 yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i 1573 (1761)
||+||++.++...... .....+++|+|+++++++|+|++ +++++.|.+|||++
T Consensus 303 YG~tE~~~~~~~~~~~--------------------------~~~~~~~~G~~~~~~~~~i~d~~-~~~~~~g~~Gel~v 355 (509)
T PRK12406 303 YGSTESGAVTFATSED--------------------------ALSHPGTVGKAAPGAELRFVDED-GRPLPQGEIGEIYS 355 (509)
T ss_pred ccccccCceEecCccc--------------------------ccccCCCcCccCCCcEEEEECCC-CCCCCCCCceEEEE
Confidence 9999987654322100 00012359999999999999965 89999999999999
Q ss_pred cCCcccc-cccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeE
Q psy14338 1574 QSPHNAS-GYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETI 1652 (1761)
Q Consensus 1574 ~g~~v~~-GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~I 1652 (1761)
+|++++. ||++ +|+.+...+ .++||+|||+|++ ++| |+ +++.||.||+|
T Consensus 356 ~~~~~~~~~y~~---~~~~~~~~~---------~~~~~~TGD~~~~------~~~--------g~----~~~~GR~~d~i 405 (509)
T PRK12406 356 RIAGNPDFTYHN---KPEKRAEID---------RGGFITSGDVGYL------DAD--------GY----LFLCDRKRDMV 405 (509)
T ss_pred ECCccccccccC---Cchhccccc---------CCCCeEEccEEEE------cCC--------ce----EEEeecccceE
Confidence 9999875 9998 888887654 4789999999999 999 99 99999999999
Q ss_pred EeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHHHHHHhhhcCceeeEEEEEC
Q psy14338 1653 MLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLVTNAVLEEHHLIVGVAVVVD 1726 (1761)
Q Consensus 1653 ki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~ 1726 (1761)
|++|++|+|.|||+ +|.++|+|.+|+|++. ++.++++++... ...+.++++++++++ |+ .|++|..+++++
T Consensus 406 k~~G~~v~~~~IE~-~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~-~~~~P~~i~~~~ 482 (509)
T PRK12406 406 ISGGVNIYPAEIEA-VLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLKAR-LA-GYKVPKHIEIMA 482 (509)
T ss_pred EECCEEECHHHHHH-HHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHHHh-cc-cCCCCcEEEEec
Confidence 99999999999999 8899999999999874 346778887643 335678999999987 88 899999999999
Q ss_pred CCCccCCCchhhhHHHHHHHHHc
Q psy14338 1727 PGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1727 ~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+||+|++||++|++|++.+..
T Consensus 483 --~iP~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 483 --ELPREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred --cCCCCCccchhHHHHHHHHHh
Confidence 999999999999999988754
|
|
| >PRK08308 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-53 Score=534.84 Aligned_cols=401 Identities=13% Similarity=0.131 Sum_probs=344.4
Q ss_pred EEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhH
Q psy14338 111 ITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQ 190 (1761)
Q Consensus 111 ~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~r 190 (1761)
+++||+||+++++++|+.|. .|+++|++|+|+++|+ +++++++||++++|++++||||..+.+ +
T Consensus 7 ~~~ty~el~~~~~~~a~~l~---------~~~~~g~~V~i~~~~~--~~~~~~~la~~~~G~~~v~l~~~~~~~-----~ 70 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ---------FQEAAGNRFAVCLKDP--FDIITLVFFLKEKGASVLPIHPDTPKE-----A 70 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH---------cCCCCCCEEEEECCCC--hHHHHHHHHHHHCCeEEEecCCCCCHH-----H
Confidence 58999999999999999986 4689999999999999 999999999999999999999999876 8
Q ss_pred HHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCce
Q psy14338 191 IGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVM 270 (1761)
Q Consensus 191 l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PK 270 (1761)
+..++++++++++++++.... . .. .....+++++||+|||||||.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~~~~------------~----------~~-----------~~~~~~~~~~~i~~TSGtTG~PK 117 (414)
T PRK08308 71 AIRMAKRAGCHGLLYGESDFT------------K----------LE-----------AVNYLAEEPSLLQYSSGTTGEPK 117 (414)
T ss_pred HHHHHHhCCCCEEEecCcccc------------c----------cc-----------CCCCCCCCceEEEECCCCCCCCc
Confidence 999999999999998763100 0 00 01235789999999999999999
Q ss_pred EEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceE
Q psy14338 271 GVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASV 350 (1761)
Q Consensus 271 gV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~ 350 (1761)
||+++|+++.+.+.+....+++..+|+++.++|++|++++...++.+|..|+++++.+ .+++..+++.++++++|+
T Consensus 118 gv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~~t~ 193 (414)
T PRK08308 118 LIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT----NKNPKFALNILRNTPQHI 193 (414)
T ss_pred EEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC----CCCHHHHHHHHHHhCCeE
Confidence 9999999999999888888999999999999999999998767999999999999988 678999999999999999
Q ss_pred EEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCC
Q psy14338 351 AVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRA 430 (1761)
Q Consensus 351 ~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~ 430 (1761)
+..+| +++..+...... ..+++.+++| |+++++++.++|.+.. . +++|.||+||++.++....
T Consensus 194 ~~~~P-~~~~~l~~~~~~----~~~l~~~~~~--G~~l~~~~~~~~~~~~----~---~~~~~YG~tE~~~~~~~~~--- 256 (414)
T PRK08308 194 LYAVP-LMLHILGRLLPG----TFQFHAVMTS--GTPLPEAWFYKLRERT----T---YMMQQYGCSEAGCVSICPD--- 256 (414)
T ss_pred EEcCH-HHHHHHHhcCCc----cccccEEEEc--cCCCCHHHHHHHHHhC----C---hhhhccCccccCCeeecCC---
Confidence 99986 477666654321 1368889988 8999999999998762 2 3999999999986543211
Q ss_pred CcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCC
Q psy14338 431 GVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLP 510 (1761)
Q Consensus 431 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p 510 (1761)
.....++|+|++++++++.++. |..|||++++.
T Consensus 257 -----------------------------~~~~~~~G~p~~~~~~~~~~~~--------~~~gel~v~~~---------- 289 (414)
T PRK08308 257 -----------------------------MKSHLDLGNPLPHVSVSAGSDE--------NAPEEIVVKMG---------- 289 (414)
T ss_pred -----------------------------CCCCCccCccCCCeEEEEecCC--------CCCceEEEEcC----------
Confidence 0124579999999999997643 45699999741
Q ss_pred ccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEE
Q psy14338 511 GLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIA 590 (1761)
Q Consensus 511 ~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~ 590 (1761)
++||+|||+|++++||+++|+||.|++||++|+||+|.|||+.+.+++++ .+|+
T Consensus 290 ---------------------~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v-----~~a~ 343 (414)
T PRK08308 290 ---------------------DKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGV-----QEAV 343 (414)
T ss_pred ---------------------CceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCe-----eEEE
Confidence 57999999999999999999999999999999999999999999998888 6899
Q ss_pred EEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHH
Q psy14338 591 VFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECK 661 (1761)
Q Consensus 591 v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~ 661 (1761)
|++.++. .++.++++++.....+.++++++++++|+.||+|..+ +.+++||+|++||+||++|+
T Consensus 344 v~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~l~~~l~~~~~P~~i-------~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 344 VYRGKDPVAGERVKAKVISHEEIDPVQLREWCIQHLAPYQVPHEI-------ESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred EEeccCCCCCceEEEEEEeCCCCCHHHHHHHHHHhCccccCCcEE-------EEeccCCCCCCcCeehhhhh
Confidence 9988754 5778889988877788999999999999999999986 55699999999999999654
|
|
| >PRK13391 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-53 Score=550.22 Aligned_cols=484 Identities=15% Similarity=0.188 Sum_probs=378.9
Q ss_pred cCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1178 VAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1178 a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
++++|+++|+++.+ +++.+||.||.++++++|++|.+. |+++|++|+++++|++++++++|||+++|++++|+|+.
T Consensus 7 a~~~p~~~a~~~~~---~~~~~ty~~l~~~~~~la~~L~~~-g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 7 AQTTPDKPAVIMAS---TGEVVTYRELDERSNRLAHLFRSL-GLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred HhhCCCceEEEecC---CCCEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 35789999998422 457899999999999999999999 99999999999999999999999999999999999998
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc-----ccccccCCccccCCCCccchh-hhccCCCCCCCE
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN-----VVDIKSWPTILDTDDMPKKKL-AALYRAPTAEML 1331 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 1331 (1761)
+|.+ ++.++++++++++++++.............. .+....-.............. .......+.++.
T Consensus 83 ~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (511)
T PRK13391 83 LTPA------EAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLPATPIADESLG 156 (511)
T ss_pred cCHH------HHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCCCCCCCCcccc
Confidence 7777 9999999999999999987655443221110 000000000000000000000 000111233467
Q ss_pred EEEEeccCCCCCCceEEc--cHHHHHH---HHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCc
Q psy14338 1332 AYLDFSVSTTGMLAGIKM--SHAAVTS---LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE 1406 (1761)
Q Consensus 1332 a~ii~TSGSTG~PKgV~~--sh~~l~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~ 1406 (1761)
++++|||||||.||||++ +|.++.. ........+++.++++++...+++|..++ ...+.++..|+++++.+.
T Consensus 157 a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~-~~~~~~~~~g~~~~~~~~-- 233 (511)
T PRK13391 157 TDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQ-RAVMLVIRLGGTVIVMEH-- 233 (511)
T ss_pred cEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHH-HHHHHHHHcCceEEECCC--
Confidence 899999999999999995 5766543 33445567788888888888888887776 456788999999999874
Q ss_pred cccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCC
Q psy14338 1407 VEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLS 1486 (1761)
Q Consensus 1407 ~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~ 1486 (1761)
+++..+++.++++++|++.++|+++..+++... ......+++++|.+++||+++++ .+.+++.+.++
T Consensus 234 --~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-----~~~~~~~~~~l~~~~~gg~~~~~-~~~~~~~~~~g----- 300 (511)
T PRK13391 234 --FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPE-----EVRDKYDLSSLEVAIHAAAPCPP-QVKEQMIDWWG----- 300 (511)
T ss_pred --CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCch-----hhcccCCccceeEEEEccCCCCH-HHHHHHHHHcC-----
Confidence 689999999999999999999999998875321 11234467899999999999999 78788777653
Q ss_pred CccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCC
Q psy14338 1487 PRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDS 1566 (1761)
Q Consensus 1487 e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G 1566 (1761)
..+++.||+||++.++...... . ....+++|+|+++ .++|+|++ +++++.|
T Consensus 301 -~~v~~~YG~tE~~~~~~~~~~~----~----------------------~~~~~~vG~~~~g-~~~i~d~~-~~~~~~g 351 (511)
T PRK13391 301 -PIIHEYYAATEGLGFTACDSEE----W----------------------LAHPGTVGRAMFG-DLHILDDD-GAELPPG 351 (511)
T ss_pred -CceeeeeccccccceEEecCcc----c----------------------cccCCCcCCcccc-eEEEECCC-CCCCCCC
Confidence 4699999999987643321100 0 0012359999999 69999954 8999999
Q ss_pred cceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEc
Q psy14338 1567 HLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVG 1646 (1761)
Q Consensus 1567 ~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~G 1646 (1761)
+.|||+++|+ ++.||++ +++.|.+.|.. .++||+|||+|++ ++| |. ++|+|
T Consensus 352 ~~Gel~~~g~-~~~gy~~---~~~~~~~~~~~-------~~~w~~TGD~g~~------~~~--------g~----l~~~g 402 (511)
T PRK13391 352 EPGTIWFEGG-RPFEYLN---DPAKTAEARHP-------DGTWSTVGDIGYV------DED--------GY----LYLTD 402 (511)
T ss_pred CceEEEEecC-cceEEcC---ChhHhHHhhcc-------CCCEEecCCEEEE------CCC--------cc----EEEec
Confidence 9999999999 8999999 99999998842 2589999999999 999 99 99999
Q ss_pred ccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC----chhHhhHHHHHHHHHhhhcCc
Q psy14338 1647 ALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN----ESEALDLVPLVTNAVLEEHHL 1717 (1761)
Q Consensus 1647 R~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~----~~~~~~l~~~l~~~~Lp~~~~ 1717 (1761)
|.||+||++|++|+|.|||+ ++.+||.|.+|+|++. ++.++++++.... ....++++++|+++ || .|+
T Consensus 403 R~~~~i~~~G~~v~~~eie~-~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-l~-~~~ 479 (511)
T PRK13391 403 RAAFMIISGGVNIYPQEAEN-LLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQR-LS-RQK 479 (511)
T ss_pred cCCCEEEeCCEEECHHHHHH-HHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHHHHHHhh-cc-cCc
Confidence 99999999999999999999 8999999999999974 4567777775321 12346899999987 88 999
Q ss_pred eeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1718 IVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1718 vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
+|..|.+++ ++|+|++||++|+.|++.+.+.
T Consensus 480 ~P~~i~~~~--~~P~t~~gKv~r~~l~~~~~~~ 510 (511)
T PRK13391 480 CPRSIDFED--ELPRLPTGKLYKRLLRDRYWGN 510 (511)
T ss_pred CCcEEEEee--cCCCCCccceeHHHHHHHhhcc
Confidence 999999999 9999999999999999988654
|
|
| >TIGR01923 menE O-succinylbenzoate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-53 Score=541.40 Aligned_cols=435 Identities=18% Similarity=0.195 Sum_probs=360.8
Q ss_pred eHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHH
Q psy14338 114 TYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGF 193 (1761)
Q Consensus 114 TY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~ 193 (1761)
||+||.++++++|..|+ +.|+++||+|+|+++|+ +++++++|||+++|++++|+++.++.+ ++..
T Consensus 1 Ty~~l~~~~~~~a~~l~--------~~g~~~gd~v~i~~~~~--~~~~~~~la~~~~G~~~~~~~~~~~~~-----~~~~ 65 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALK--------AQGIRSGSRVALVGQNS--IEMVLLLHACLLLGAEIAMLNTRLTEN-----ERTN 65 (436)
T ss_pred CHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCC--HHHHHHHHHHHhcCcEEEecCcCCCHH-----HHHH
Confidence 89999999999999999 89999999999999999 999999999999999999999999876 8999
Q ss_pred HHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEE
Q psy14338 194 LLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVT 273 (1761)
Q Consensus 194 il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~ 273 (1761)
++++++++++++++........ ...... ................++++++++|||||||.||||+
T Consensus 66 ~~~~~~~~~~i~~~~~~~~~~~--------~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~ 130 (436)
T TIGR01923 66 QLEDLDVQLLLTDSLLEEKDFQ--------ADSLDR-------IEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVP 130 (436)
T ss_pred HHHhcCCCEEEEcCccccccee--------ecchHh-------hhhcccccccccccCCcCceEEEEeCCCCCCCCcEEE
Confidence 9999999999998764321100 000000 0000001111123346789999999999999999999
Q ss_pred EchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEe
Q psy14338 274 VTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVV 353 (1761)
Q Consensus 274 ~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~ 353 (1761)
++|+++...+.+....++++++|+++..+|++|..++.. ++.++..|+++++.+ .+ ..+++.|+++++|++..
T Consensus 131 ~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~----~~--~~~~~~l~~~~~t~~~~ 203 (436)
T TIGR01923 131 HTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSI-LFRWLIEGATLRIVD----KF--NQLLEMIANERVTHISL 203 (436)
T ss_pred EehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHH-HHHHHhcCceEEecc----hH--HHHHHHHHHhCCeEEEe
Confidence 999999999999999999999999999999999999874 999999999999987 33 38999999999999999
Q ss_pred cCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcc
Q psy14338 354 KSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVN 433 (1761)
Q Consensus 354 ~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 433 (1761)
+| +++..++..... .+++|.+++| |+++++++.+.|... |++ ++|.||+||++..++.....
T Consensus 204 ~P-~~l~~l~~~~~~----~~~l~~~~~~--G~~~~~~~~~~~~~~----~~~---~~~~YG~tE~~~~~~~~~~~---- 265 (436)
T TIGR01923 204 VP-TQLNRLLDEGGH----NENLRKILLG--GSAIPAPLIEEAQQY----GLP---IYLSYGMTETCSQVTTATPE---- 265 (436)
T ss_pred HH-HHHHHHHhCcCC----CCceEEEEEC--CCCCCHHHHHHHHHh----CCc---eeeEecCCccchhccCcCcc----
Confidence 96 477777765322 2789999999 999999999887653 554 99999999997654422210
Q ss_pred cCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccc
Q psy14338 434 ATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLS 513 (1761)
Q Consensus 434 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T 513 (1761)
. .....++|+|+++++++|.+++. ++.|||+|+|+.+++||+++++.+
T Consensus 266 ----------------------~---~~~~~~~G~~~~~~~~~i~~~~~-------~~~Gel~v~~~~~~~gy~~~~~~~ 313 (436)
T TIGR01923 266 ----------------------M---LHARPDVGRPLAGREIKIKVDNK-------EGHGEIMVKGANLMKGYLYQGELT 313 (436)
T ss_pred ----------------------c---cccccCCCccCCCcEEEEEeCCC-------CCceEEEEECCccchhhCCChhhh
Confidence 0 01112489999999999943322 367999999999999999999888
Q ss_pred cccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEE
Q psy14338 514 NTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFS 593 (1761)
Q Consensus 514 ~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~ 593 (1761)
...|. ++||+|||+|++++||.+++.||.||+||++|++|++.|||+.+..++.+ .+++|++
T Consensus 314 ~~~~~-------------~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v-----~~~~v~~ 375 (436)
T TIGR01923 314 PAFEQ-------------QGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGI-----QEAVVVP 375 (436)
T ss_pred hhhhc-------------CCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCe-----eEEEEeC
Confidence 76653 68999999999999999999999999999999999999999999988777 7898888
Q ss_pred EecC-CCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHH
Q psy14338 594 IRVL-RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSEC 660 (1761)
Q Consensus 594 ~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L 660 (1761)
.++. .+..++++++...+.+.+++.+++++.|+.|++|..+ +.+++||+|++||++|++|
T Consensus 376 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~l~~~l~~~~~p~~i-------~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 376 KPDAEWGQVPVAYIVSESDISQAKLIAYLTEKLAKYKVPIAF-------EKLDELPYNASGKILRNQL 436 (436)
T ss_pred CcchhcCCeeEEEEEECCCCCHHHHHHHHHHhhhCCCCCeEE-------EEecCCCCCCCCceecccC
Confidence 8743 4677889988887788899999999999999999986 5569999999999999875
|
This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate. |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=604.73 Aligned_cols=485 Identities=13% Similarity=0.171 Sum_probs=382.8
Q ss_pred ccccccccccccCCCCcCCCC-CCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAP-VPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICA 1240 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P-~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva 1240 (1761)
..++.+.+.+++. ++| ++.|+.. .+++++||+||+++++++|+.|+ . |+++||+|+++++|+++++++
T Consensus 630 ~~~~~~~l~~~~~-----~~~~~~~ai~~----~~~~~~Ty~el~~~~~~lA~~L~-~-g~~~gd~V~i~~~n~~~~~~~ 698 (1140)
T PRK06814 630 DRTLFEALIEAAK-----IHGFKKLAVED----PVNGPLTYRKLLTGAFVLGRKLK-K-NTPPGENVGVMLPNANGAAVT 698 (1140)
T ss_pred cCCHHHHHHHHHH-----HcCCCCeEeEC----CCCCccCHHHHHHHHHHHHHHHH-h-cCCCCCeEEEEcCCchHHHHH
Confidence 3456666766654 455 6677761 24678999999999999999996 5 899999999999999999999
Q ss_pred HHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHh------hhcc-ccccccccCCccccC-C
Q psy14338 1241 FYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLK------SKEA-SNVVDIKSWPTILDT-D 1312 (1761)
Q Consensus 1241 ~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~-~ 1312 (1761)
++||+++|++++|+||.+|.+ ++.++++++++++++++++..+... .... ...+........... .
T Consensus 699 ~la~~~~G~v~v~l~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 772 (1140)
T PRK06814 699 FFALQSAGRVPAMINFSAGIA------NILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLAD 772 (1140)
T ss_pred HHHHHHCCCEEEEcCCCCCHH------HHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHH
Confidence 999999999999999987777 9999999999999999976543221 1100 011111110000000 0
Q ss_pred ---C-CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHH
Q psy14338 1313 ---D-MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALW 1388 (1761)
Q Consensus 1313 ---~-~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 1388 (1761)
. ..............+++++||+|||||||.||||+++|+++.+.+......+++.++|+++..+|++|.+++...
T Consensus 773 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 852 (1140)
T PRK06814 773 KIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGG 852 (1140)
T ss_pred HHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHH
Confidence 0 000000000113578999999999999999999999999999999999999999999999999999999998778
Q ss_pred HHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCC
Q psy14338 1389 VLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP 1468 (1761)
Q Consensus 1389 ~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~ 1468 (1761)
++.++.+|+++++.+. ..++..+.+.++++++|+++.+|++++.+.+. ....+++++|.+++|||+++
T Consensus 853 ~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~---------~~~~~~~~lr~v~~gg~~l~ 920 (1140)
T PRK06814 853 LVLPLLSGVKVFLYPS---PLHYRIIPELIYDTNATILFGTDTFLNGYARY---------AHPYDFRSLRYVFAGAEKVK 920 (1140)
T ss_pred HHHHHHcCCEEEEecC---cccHHHHHHHHHhcCCEEEEecHHHHHHHHhh---------cccccccceeEEEEcCCcCC
Confidence 8999999999999875 24677889999999999999999999988652 23456889999999999999
Q ss_pred hHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccC
Q psy14338 1469 RIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLP 1548 (1761)
Q Consensus 1469 ~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 1548 (1761)
+ ++.+++.+.++ ..+++.||+||++..+..... ...+..++|+|++
T Consensus 921 ~-~~~~~~~~~~~------~~~~~~YG~TE~~~~~~~~~~---------------------------~~~~~~~vG~p~~ 966 (1140)
T PRK06814 921 E-ETRQTWMEKFG------IRILEGYGVTETAPVIALNTP---------------------------MHNKAGTVGRLLP 966 (1140)
T ss_pred H-HHHHHHHHHhC------CcEEeccccccccceEEecCC---------------------------CCCCCCcCCccCC
Confidence 8 78788777663 579999999998754432110 0011235999999
Q ss_pred CcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1549 GVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1549 ~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
|+++++.+.+ + .|+.|||+|+|++++.||+| +++.+. +. ..++|||+|||+|++ |+|
T Consensus 967 g~~~~~~~~~-~----~~~~Gel~v~g~~~~~gY~~---~~~~~~--~~------~~~~g~~~TGDl~~~------d~d- 1023 (1140)
T PRK06814 967 GIEYRLEPVP-G----IDEGGRLFVRGPNVMLGYLR---AENPGV--LE------PPADGWYDTGDIVTI------DEE- 1023 (1140)
T ss_pred CCeEEEeecC-C----CCCceEEEEeCCCcchhhcC---CCCCCc--cc------cCCCCeEecCCEEEE------CCC-
Confidence 9999998743 2 46789999999999999998 654321 11 125789999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhH
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDL 1703 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l 1703 (1761)
|+ ++|+||.||+||++|+||+|.|||+ ++.+|+.|.+|+|++. ++.+++++. +.+.+.+++
T Consensus 1024 -------G~----l~~~GR~~d~i~~~G~~v~~~eIE~-~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~--~~~~~~~~l 1089 (1140)
T PRK06814 1024 -------GF----ITIKGRAKRFAKIAGEMISLAAVEE-LAAELWPDALHAAVSIPDARKGERIILLTT--ASDATRAAF 1089 (1140)
T ss_pred -------Ce----EEEEecccCeeeeCCEEECHHHHHH-HHHhcCCcccEEEEEcccCCCCceEEEEEc--CCCcCHHHH
Confidence 99 9999999999999999999999999 8999999999999974 346666654 344567789
Q ss_pred HHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1704 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1704 ~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+++++++.|+ .||+|..+++++ ++|+|++||+||++|++...+
T Consensus 1090 ~~~~~~~~l~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~~ 1132 (1140)
T PRK06814 1090 LAHAKAAGAS-ELMVPAEIITID--EIPLLGTGKIDYVAVTKLAEE 1132 (1140)
T ss_pred HHHHHHcCCC-cccCCcEEEEec--CcCCCCCCCCcHHHHHHHHHH
Confidence 9999875588 999999999999 999999999999999998744
|
|
| >PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-53 Score=540.89 Aligned_cols=436 Identities=17% Similarity=0.154 Sum_probs=361.3
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
+++|+++|+. .+++.+||+||.++++++|+.|.+. |+++|++|+++++|+++++++++||+++|++++|++|..
T Consensus 14 ~~~~~~~a~~-----~~~~~~ty~el~~~~~~~a~~L~~~-g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 87 (458)
T PRK09029 14 QVRPQAIALR-----LNDEVLTWQQLCARIDQLAAGFAQQ-GVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQL 87 (458)
T ss_pred HhCCCceeee-----cCCcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCC
Confidence 4679999999 6788999999999999999999999 999999999999999999999999999999999999987
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEecc
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSV 1338 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 1338 (1761)
|.+ ++..+++++++++++++.+... ...... . ... .. .........++++++++|||
T Consensus 88 ~~~------~~~~~~~~~~~~~~i~~~~~~~-~~~~~~---~---~~~-----~~-----~~~~~~~~~~~~~a~i~~TS 144 (458)
T PRK09029 88 PQP------LLEELLPSLTLDFALVLEGENT-FSALTS---L---HLQ-----LV-----EGAHAVAWQPQRLATMTLTS 144 (458)
T ss_pred CHH------HHHHHHHhcCCCEEEEcCcccc-hhhccc---c---ccc-----cc-----cccCcccCCCCCeEEEEECC
Confidence 777 9999999999999999876422 111000 0 000 00 00111234678999999999
Q ss_pred CCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHH
Q psy14338 1339 STTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418 (1761)
Q Consensus 1339 GSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i 1418 (1761)
||||.||||+++|+++...+......+++.++|+++...|++|.+++ ..++.+|..|+++++.+. ..+++.+
T Consensus 145 GTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~~~-------~~~~~~i 216 (458)
T PRK09029 145 GSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVRDK-------QPLEQAL 216 (458)
T ss_pred CCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeCCh-------HHHHHHH
Confidence 99999999999999999999988889999999999999999888887 456778999999998763 3466666
Q ss_pred HhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccc
Q psy14338 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498 (1761)
Q Consensus 1419 ~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE 1498 (1761)
.++|.+..+|+++..++... ....+||.+++||+++++ .+.+++.+. | ..+++.||+||
T Consensus 217 --~~~t~~~~~P~~~~~l~~~~-----------~~~~~l~~i~~gG~~~~~-~~~~~~~~~----g---~~~~~~YG~tE 275 (458)
T PRK09029 217 --AGCTHASLVPTQLWRLLDNR-----------SEPLSLKAVLLGGAAIPV-ELTEQAEQQ----G---IRCWCGYGLTE 275 (458)
T ss_pred --hhceeeecChHHHHHHHhcc-----------ccCCcceEEEECCCCCCH-HHHHHHHHc----C---CcEeccccccc
Confidence 37999999999999886521 114479999999999998 676666542 3 56899999999
Q ss_pred cceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcc
Q psy14338 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHN 1578 (1761)
Q Consensus 1499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v 1578 (1761)
++........ . ...++|+|+++++++|+| |||+|+|+.+
T Consensus 276 ~~~~~~~~~~------------------------~-----~~~~~G~~~~~~~~~i~~------------gel~v~g~~~ 314 (458)
T PRK09029 276 MASTVCAKRA------------------------D-----GLAGVGSPLPGREVKLVD------------GEIWLRGASL 314 (458)
T ss_pred cCcceeccCC------------------------C-----CCCCCCCCCCCCEEEEeC------------CEEEEecCce
Confidence 7643221100 0 012489999999999976 8999999999
Q ss_pred cccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCee
Q psy14338 1579 ASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMR 1658 (1761)
Q Consensus 1579 ~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~r 1658 (1761)
+.||++ +|+.+... .++|||+|||+|++ | | |+ ++|+||+||+||++|+|
T Consensus 315 ~~gY~~---~~~~~~~~---------~~~~~~~TGD~~~~------~-~--------g~----l~~~gR~~d~i~~~G~~ 363 (458)
T PRK09029 315 ALGYWR---QGQLVPLV---------NDEGWFATRDRGEW------Q-N--------GE----LTILGRLDNLFFSGGEG 363 (458)
T ss_pred eeeeec---Cccccccc---------cCCCccCCCCcEEE------e-C--------CE----EEEecccccceeeCCEE
Confidence 999999 88887532 25789999999999 8 8 99 99999999999999999
Q ss_pred cChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCC
Q psy14338 1659 YHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPIN 1733 (1761)
Q Consensus 1659 I~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t 1733 (1761)
|+|.|||+ ++.+||+|.+|+|++. ++.++++|+.. ...+.++|+++|+++ |+ .|++|..+++++ ++|+|
T Consensus 364 v~p~eiE~-~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~-~~~~~~~l~~~~~~~-l~-~~~~P~~~~~~~--~~p~t 437 (458)
T PRK09029 364 IQPEEIER-VINQHPLVQQVFVVPVADAEFGQRPVAVVESD-SEAAVVNLAEWLQDK-LA-RFQQPVAYYLLP--PELKN 437 (458)
T ss_pred eCHHHHHH-HHhcCCCcceEEEEccCCcccCceEEEEEEcC-cccCHHHHHHHHHhh-ch-hccCCeEEEEec--ccccC
Confidence 99999999 8999999999999974 45788888765 345677999999997 88 999999999999 99999
Q ss_pred CchhhhHHHHHHHHHcC
Q psy14338 1734 SRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1734 ~~GKvdR~~L~~~~~~~ 1750 (1761)
++||++|+.|++++.+.
T Consensus 438 ~~gKi~r~~L~~~~~~~ 454 (458)
T PRK09029 438 GGIKISRQALKEWVAQQ 454 (458)
T ss_pred cCCCcCHHHHHHHHHhc
Confidence 99999999999988543
|
|
| >PRK08276 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-53 Score=545.98 Aligned_cols=471 Identities=15% Similarity=0.174 Sum_probs=370.3
Q ss_pred CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHH
Q psy14338 1194 SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIV 1273 (1761)
Q Consensus 1194 ~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il 1273 (1761)
..++.+||+||.++++++|++|.+. |+++|++|+++++|++++++++|||+++|++++|++|..+.+ ++.+++
T Consensus 7 ~~~~~~ty~el~~~v~~~a~~L~~~-g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~------~~~~~~ 79 (502)
T PRK08276 7 PSGEVVTYGELEARSNRLAHGLRAL-GLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAA------EIAYIV 79 (502)
T ss_pred CCCcEEEHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHH------HHHHHH
Confidence 5778999999999999999999999 999999999999999999999999999999999999987777 999999
Q ss_pred HhcCCeEEEechhHHHHHhhhccc-----cccccccCCccccCCCCccc-hhhhccCCCCCCCEEEEEeccCCCCCCceE
Q psy14338 1274 DVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIKSWPTILDTDDMPKK-KLAALYRAPTAEMLAYLDFSVSTTGMLAGI 1347 (1761)
Q Consensus 1274 ~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV 1347 (1761)
+++++++++++......+...... ..+.... ............ ...........++.++++|||||||.||||
T Consensus 80 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v 158 (502)
T PRK08276 80 DDSGAKVLIVSAALADTAAELAAELPAGVPLLLVVA-GPVPGFRSYEEALAAQPDTPIADETAGADMLYSSGTTGRPKGI 158 (502)
T ss_pred hcCCCCEEEEccchhhHHHHHhhhccccccEEEEeC-CCCCccccHHHHHhcCCCCCCCCCCcceEEEECCCCCCCCceE
Confidence 999999999998765544332110 0000000 000000000000 000011123456789999999999999999
Q ss_pred EccHHHHHHHH------HHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhc
Q psy14338 1348 KMSHAAVTSLC------RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQY 1421 (1761)
Q Consensus 1348 ~~sh~~l~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~ 1421 (1761)
+++|.++.... ......+....+++++...+++|..++ ...+.++.+|+++++.+. +++..+++.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~ 233 (502)
T PRK08276 159 KRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPL-RFGMSALALGGTVVVMEK----FDAEEALALIERY 233 (502)
T ss_pred EEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHH-HHHHHHHhccceEEEcCC----CCHHHHHHHHHHh
Confidence 99988754322 222222333456677777777777766 445678999999998874 7899999999999
Q ss_pred CceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccce
Q psy14338 1422 RVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIA 1501 (1761)
Q Consensus 1422 ~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~ 1501 (1761)
++|++.++|+++..+++... ......+++++|.+++||++++. .+.+++.+.+. ..+++.||+||++.
T Consensus 234 ~~t~~~~~P~~~~~l~~~~~-----~~~~~~~~~~lr~i~~~g~~~~~-~~~~~~~~~~~------~~~~~~yG~tE~~~ 301 (502)
T PRK08276 234 RVTHSQLVPTMFVRMLKLPE-----EVRARYDVSSLRVAIHAAAPCPV-EVKRAMIDWWG------PIIHEYYASSEGGG 301 (502)
T ss_pred CCeEEEehHHHHHHHHhCcc-----ccCCCCCcccceEEEecCCCCCH-HHHHHHHHHhC------cHhhhhcccccccc
Confidence 99999999999999876311 11234568899999999999998 88888877663 46899999999876
Q ss_pred eeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCccccc
Q psy14338 1502 ICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASG 1581 (1761)
Q Consensus 1502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~G 1581 (1761)
++...... . ....+++|+|+ +++++|+|++ +++++.|+.|||+++|+.++.|
T Consensus 302 ~~~~~~~~------------~--------------~~~~~~~G~~~-~~~~~i~d~~-~~~~~~g~~Gel~v~~~~~~~g 353 (502)
T PRK08276 302 VTVITSED------------W--------------LAHPGSVGKAV-LGEVRILDED-GNELPPGEIGTVYFEMDGYPFE 353 (502)
T ss_pred eeEecCcc------------c--------------cccCCCcceec-ccEEEEECCC-CCCCcCCCceEEEEECCCccch
Confidence 54322110 0 00123599999 8899999965 7899999999999999999999
Q ss_pred ccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecCh
Q psy14338 1582 YFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHP 1661 (1761)
Q Consensus 1582 Y~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~ 1661 (1761)
|++ +|+.+.+.|. .++||+|||+|++ ++| |. +++.||+||+||++|++|++
T Consensus 354 y~~---~~~~~~~~~~--------~~~~~~TGD~~~~------~~~--------g~----~~~~GR~~~~i~~~G~~v~~ 404 (502)
T PRK08276 354 YHN---DPEKTAAARN--------PHGWVTVGDVGYL------DED--------GY----LYLTDRKSDMIISGGVNIYP 404 (502)
T ss_pred hcC---CHHHHHHHhc--------CCCceeecceEEE------cCC--------cC----EEEeccCcceEEeCCEEeCH
Confidence 999 9999999984 4589999999999 899 99 99999999999999999999
Q ss_pred HHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc----hhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccC
Q psy14338 1662 IDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE----SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPI 1732 (1761)
Q Consensus 1662 ~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~----~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~ 1732 (1761)
.|||. ++.+||+|.+|+|++. ++.++++|+..... ...++++++++++ |+ .||+|..+++++ +||+
T Consensus 405 ~~iE~-~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~-~~~~p~~i~~~~--~lP~ 479 (502)
T PRK08276 405 QEIEN-LLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGR-LA-HYKCPRSIDFED--ELPR 479 (502)
T ss_pred HHHHH-HHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhh-cc-CCCCCcEEEEec--CCCC
Confidence 99999 8889999999999974 45788888875321 1234788999887 88 899999999999 9999
Q ss_pred CCchhhhHHHHHHHHHcCC
Q psy14338 1733 NSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1733 t~~GKvdR~~L~~~~~~~~ 1751 (1761)
|++||++|++|++.+..+.
T Consensus 480 t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 480 TPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred CcccchhHHHHHHHHHhhh
Confidence 9999999999999986654
|
|
| >KOG1175|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-53 Score=514.31 Aligned_cols=497 Identities=18% Similarity=0.209 Sum_probs=401.7
Q ss_pred cCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCe
Q psy14338 94 TYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIV 173 (1761)
Q Consensus 94 ~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~ 173 (1761)
.++.+|+++++..++....+||.||.+++.++|..|+ ..|+++||+|++++|+. +++++++|||.++|++
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~--------~~g~~kGD~V~~~mPm~--~e~~ia~lA~~r~Gai 147 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLR--------KCGLKKGDTVAIYMPMI--PEAVIAMLACARIGAI 147 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHH--------hcCCCCCcEEEEeccCC--hHHHHHHHHHhhcCeE
Confidence 5899999998665544456999999999999999999 78899999999999999 9999999999999999
Q ss_pred EEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccccccee-----ccCC--Cccee---------EEecc
Q psy14338 174 PVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVA-----FKGW--PKLTW---------FVTEH 237 (1761)
Q Consensus 174 ~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~---------~~~~~ 237 (1761)
..++-..+++. .+...+.++++++++|.+..............+. .... +.... +..+.
T Consensus 148 ~~~v~~~fs~~-----~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 222 (626)
T KOG1175|consen 148 HSSVFAGFSAK-----ELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSL 222 (626)
T ss_pred EEEeeccCCHH-----HHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHH
Confidence 99999999987 6999999999999999987655443322111000 0000 00000 00111
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHH-HHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAM-LSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLT 316 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l-~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~ 316 (1761)
.........+......+|+.+|+|||||||.||||.+++.+. +..+......++++++|++.+++.+.++.+.+...+.
T Consensus 223 ~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~g 302 (626)
T KOG1175|consen 223 ELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYG 302 (626)
T ss_pred HhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhh
Confidence 111112223355678899999999999999999999999864 5555666778899999999999999999999976788
Q ss_pred HHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhc--CCCCCCCCCCceeEEEecCCCccCCHHHHH
Q psy14338 317 SVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLA--TKDHKDISLSSLRLLLVGDGANPWSLSSCD 394 (1761)
Q Consensus 317 ~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~--~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~ 394 (1761)
+|++|+|+++.+.. .+++..+++.+.+++||+++..| +.+..+.. .......++++||.+.++ |||++++..+
T Consensus 303 pl~~Ga~~vl~~g~--p~~~~~~~~~v~k~~it~l~t~p-t~~r~l~~~~~~~~~~~~~~sLk~~~S~--Gepi~~~~~e 377 (626)
T KOG1175|consen 303 PLLNGATVVLYEGP--PFDPGRIWKILDKYKVTVLYTAP-TAYRLLRRLGQEDVTSYSLKSLRTCGSV--GEPINPEAWE 377 (626)
T ss_pred hhhcCcEEEEEcCC--CCChhhhhhhHhhcceEEEEecc-HHHHHHHHhccccccccccceEEEEeec--CccCCcchHH
Confidence 99999999999853 45999999999999999999986 46664433 333344556789999999 9999999999
Q ss_pred HHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcE
Q psy14338 395 QFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCI 474 (1761)
Q Consensus 395 ~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 474 (1761)
.|.+.+ |.. .+++.||.||++..++..... . . ..++++.|.|.+|+.
T Consensus 378 w~~~~~---~~~--pv~e~~~qtEtG~~~i~~~~g--------------------------~-~-p~~pg~~~~p~~g~~ 424 (626)
T KOG1175|consen 378 WWKRVT---GLD--PIYETYGQTETGGICITPKPG--------------------------K-L-PIKPGSAGKPFPGYD 424 (626)
T ss_pred HHHHhc---Ccc--chhhceeeeccCceeeeccCC--------------------------C-C-CcCccccCCCCCCcc
Confidence 999998 442 289999999998766533211 0 0 245789999999999
Q ss_pred EEEEeCCCCcccCCCC-CceEEEEecC---CccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEE
Q psy14338 475 MTVVKMDSPSYLCKTD-EVGEICVAST---GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVF 550 (1761)
Q Consensus 475 ~~I~d~~~~~~~~p~G-~~GEL~i~G~---~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~ 550 (1761)
+.|+|++|++ ++.+ +.|||+++.+ +.+++||||++ +|..-+|.+- .|+|.|||.+++|+||+++
T Consensus 425 v~i~de~g~~--~~~~~~~G~l~~~~~~P~~~~r~~~~n~e----rf~~~yf~k~------pg~y~tGD~~~rd~dGY~~ 492 (626)
T KOG1175|consen 425 VQILDENGNE--LPPSTGNGELRLKPPWPPGMFRTLWGNHE----RFRAAYFKKF------PGYYFTGDGGRRDEDGYYW 492 (626)
T ss_pred eEEECCCCCC--cCCCCceeEEEEeCCCCccccccccCCHH----HhhhhhcccC------CceEEecCceEEcCCceEE
Confidence 9999999984 6665 9999999975 77999999998 5555554332 6899999999999999999
Q ss_pred EEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC-CC----HHHHHHHHHHH
Q psy14338 551 VCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD-CS----EEESFQWMSRV 624 (1761)
Q Consensus 551 ~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~-~~----~~~l~~~l~~~ 624 (1761)
++||.||.|+++|+|+...|||+++..++.| .|++||+.+++ .+|.++||+++.++ .+ .++|+.++++.
T Consensus 493 i~GR~DDviNvsGhRigtaEIE~al~~hp~V-----aEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~ 567 (626)
T KOG1175|consen 493 ILGRVDDVINVSGHRIGTAEIESALVEHPAV-----AESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSV 567 (626)
T ss_pred EEecccccccccceeecHHHHHHHHhhCcch-----hheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhh
Confidence 9999999999999999999999999888887 79999999954 78999999999876 23 45677788888
Q ss_pred HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 625 LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 625 Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
+.+|..|+.| +.++.||+|.|||+-|++|++.....
T Consensus 568 igp~a~P~~I-------~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 568 IGPYAVPRLI-------VFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred cCccccccee-------EecCCCCccccchhHHHHHHHHhccC
Confidence 9999999997 55699999999999999999987654
|
|
| >PRK07768 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-52 Score=543.26 Aligned_cols=519 Identities=18% Similarity=0.226 Sum_probs=386.2
Q ss_pred CCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1180 GAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
..|+.+++... +.++.+||.||+++++++|++|.+. |+++||+|+|+++|+++++++++||+++|++++|+++..+
T Consensus 14 ~~~~~~~~~~~---~~~~~~ty~el~~~v~~~a~~L~~~-g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~~~~~ 89 (545)
T PRK07768 14 TSPRGMVTGEP---DAPVRHTWGEVHERARRIAGGLAAA-GVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLHQPTP 89 (545)
T ss_pred CCCcceEEecC---CCceEecHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCchHHHHHHHHHHHcCccccccCCCCC
Confidence 56888887532 3467899999999999999999999 9999999999999999999999999999999999998877
Q ss_pred CCc-cCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEecc
Q psy14338 1260 QNL-QTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSV 1338 (1761)
Q Consensus 1260 ~~~-~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 1338 (1761)
.+. ....+++.++++.++++.++++............. .+....+.++..... .......++++++|+|||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~-------~~~~~~~~~~~a~i~~TS 161 (545)
T PRK07768 90 RTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK-GIRVLTVADLLAADP-------IDPVETGEDDLALMQLTS 161 (545)
T ss_pred cchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc-CCceeehhhhcccCC-------CCcCCCCCCCEEEEEeCC
Confidence 651 11223456678889999999987654433322111 111112222211110 012245679999999999
Q ss_pred CCCCCCceEEccHHHHHHHHHHHHHHcCcCCC-CeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHH
Q psy14338 1339 STTGMLAGIKMSHAAVTSLCRSMKLACELYPS-RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSA 1417 (1761)
Q Consensus 1339 GSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~ 1417 (1761)
||||+||||+++|+++.+.+......+++.++ |+++.++|++|..++...++.++..|++++++++.....++..+.+.
T Consensus 162 GtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~ 241 (545)
T PRK07768 162 GSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAEL 241 (545)
T ss_pred CCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHH
Confidence 99999999999999999999888888888876 78888999999999876677889999999998754434588899999
Q ss_pred HHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCcccccccccc
Q psy14338 1418 VSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCR 1497 (1761)
Q Consensus 1418 i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~t 1497 (1761)
++++++|++..+|.++..+.+.+... ......++++||.+++||+++++ .+.+++.+....+|.....+++.||+|
T Consensus 242 i~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~lr~~~~~g~~~~~-~~~~~~~~~~~~~g~~~~~~~~~yG~t 317 (545)
T PRK07768 242 ISKYRGTMTAAPNFAYALLARRLRRQ---AKPGAFDLSSLRFALNGAEPIDP-ADVEDLLDAGARFGLRPEAILPAYGMA 317 (545)
T ss_pred HHHhCCEEEECchHHHHHHHHHHhcc---ccccCCCchheeeEEeccCCCCH-HHHHHHHHHHHhcCCCccccccccccc
Confidence 99999999988888887776533111 01124668899999999999999 777788776555565555799999999
Q ss_pred ccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCc
Q psy14338 1498 VNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPH 1577 (1761)
Q Consensus 1498 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~ 1577 (1761)
|++..+............+.+...+.. ....+..+..+.....++|+|++|++++|+|++ +++++.|+.|||+++|+.
T Consensus 318 E~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~-~~~~~~g~~Gel~v~~~~ 395 (545)
T PRK07768 318 EATLAVSFSPCGAGLVVDEVDADLLAA-LRRAVPATKGNTRRLATLGPPLPGLEVRVVDED-GQVLPPRGVGVIELRGES 395 (545)
T ss_pred ccceEEEccCCCCCcceeeechhHhhc-cCceeccCCCCcceEEeccCCCCCCEEEEECCC-CCCCCCCCEEEEEEccCc
Confidence 987755433222111111111111110 000111112223345679999999999999955 799999999999999999
Q ss_pred ccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCe
Q psy14338 1578 NASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGM 1657 (1761)
Q Consensus 1578 v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~ 1657 (1761)
+++||++ .+..... + ..++||+|||+|++ ++| |+ ++|+||+||+||++|+
T Consensus 396 ~~~gy~~---~~~~~~~-~--------~~~g~~~TGDl~~~------~~~--------g~----l~~~GR~~d~i~~~G~ 445 (545)
T PRK07768 396 VTPGYLT---MDGFIPA-Q--------DADGWLDTGDLGYL------TEE--------GE----VVVCGRVKDVIIMAGR 445 (545)
T ss_pred ccccccC---CCCCccc-c--------cCCCeeeccceEEE------ecC--------CE----EEEEccccceEEECCE
Confidence 9999997 5443322 2 25689999999999 899 99 9999999999999999
Q ss_pred ecChHHHHHHHHHhccCcceeEEEee-------CCeEEEEEEeCCC--chhHhhHHHHHHHHHhhhcC-ceeeEEEEECC
Q psy14338 1658 RYHPIDIENSVMRAHKKIAECAVFTW-------TNLLVVVVELDGN--ESEALDLVPLVTNAVLEEHH-LIVGVAVVVDP 1727 (1761)
Q Consensus 1658 rI~~~eIE~~~l~~~p~V~~a~Vv~~-------~~~~~a~v~~~~~--~~~~~~l~~~l~~~~Lp~~~-~vP~~i~~v~~ 1727 (1761)
+|+|.|||. ++.+||+|.+++|++. ++.++++++.... .....++.+++++. +.+.+ ..|..+.+++.
T Consensus 446 ~v~~~eiE~-~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~-l~~~~~~~p~~v~~v~~ 523 (545)
T PRK07768 446 NIYPTDIER-AAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHE-VVAEVGVRPRNVVVLGP 523 (545)
T ss_pred ecCHHHHHH-HHHhCcccccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHH-HHHHhCCCccEEEEeCC
Confidence 999999999 8999999999777642 2244555443321 12234577788776 44233 68998999875
Q ss_pred CCccCCCchhhhHHHHHHHHH
Q psy14338 1728 GVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1728 ~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
+.||+|++||++|+.|++.+.
T Consensus 524 ~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 524 GSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CcCCCCCchhHHHHHHHHhcC
Confidence 589999999999999998763
|
|
| >PRK08162 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-52 Score=544.31 Aligned_cols=496 Identities=17% Similarity=0.190 Sum_probs=374.4
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
+..+.|.+.+. ++|+++|+. .++..+||+||.++++++|+.|.+. |+++||+|+++++|++++++++||
T Consensus 19 ~~~~~~~~~~~-----~~~~~~a~~-----~~~~~~ty~~L~~~~~~~a~~L~~~-g~~~g~~v~i~~~~~~~~~~~~lA 87 (545)
T PRK08162 19 TPLSFLERAAE-----VYPDRPAVI-----HGDRRRTWAETYARCRRLASALARR-GIGRGDTVAVLLPNIPAMVEAHFG 87 (545)
T ss_pred CHHHHHHHHHH-----HCCCCeEEE-----ECCeEEEHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCchHHHHHHHH
Confidence 34445555443 679999998 5678999999999999999999998 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc---c-ccccccCCccc------cCCC
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS---N-VVDIKSWPTIL------DTDD 1313 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~-~~~~~~~~~~~------~~~~ 1313 (1761)
|+++|++++|++|.++.+ ++.++++++++++++++.+....+...... . .+......... ....
T Consensus 88 ~~~~G~~~vpl~~~~~~~------~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (545)
T PRK08162 88 VPMAGAVLNTLNTRLDAA------SIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALD 161 (545)
T ss_pred HHHhCcEEeccccccChH------HHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCccccc
Confidence 999999999999987777 999999999999999998765544332110 0 00000000000 0000
Q ss_pred Cc---cch-hh-hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHH
Q psy14338 1314 MP---KKK-LA-ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALW 1388 (1761)
Q Consensus 1314 ~~---~~~-~~-~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 1388 (1761)
.. ... .. ......+.++.++|+|||||||.||||+++|+++...+......+++..+++.+..++++|..++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~ 241 (545)
T PRK08162 162 YEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFP 241 (545)
T ss_pred HHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHH
Confidence 00 000 00 00012234578999999999999999999999987777666677788888888888888888877544
Q ss_pred HHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCC
Q psy14338 1389 VLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP 1468 (1761)
Q Consensus 1389 ~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~ 1468 (1761)
++.. +.|++.++... +++..+++.|+++++|++.++|+++..|++... .....+.+++.++++|++++
T Consensus 242 ~~~~-~~~g~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~~~~ 309 (545)
T PRK08162 242 WTVA-ARAGTNVCLRK----VDPKLIFDLIREHGVTHYCGAPIVLSALINAPA-------EWRAGIDHPVHAMVAGAAPP 309 (545)
T ss_pred HHHH-HHccEEEEeCC----CCHHHHHHHHHHcCCeEEEechHHHHHHHhCcc-------ccccCCccceEEEECCCCCC
Confidence 4444 45666666553 689999999999999999999999999976311 11223455667789999988
Q ss_pred hHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccC
Q psy14338 1469 RIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLP 1548 (1761)
Q Consensus 1469 ~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 1548 (1761)
. .+.+.+.+. | ..+++.||+||++..+......... ..+... .......++|.+++
T Consensus 310 ~-~~~~~~~~~----~---~~~~~~YG~tE~~~~~~~~~~~~~~-------~~~~~~---------~~~~~~~~~g~~~~ 365 (545)
T PRK08162 310 A-AVIAKMEEI----G---FDLTHVYGLTETYGPATVCAWQPEW-------DALPLD---------ERAQLKARQGVRYP 365 (545)
T ss_pred H-HHHHHHHHh----C---CceeecccccccCcceeeccccccc-------ccCCcc---------chhhccCCCCcccC
Confidence 7 776766553 2 5699999999975433222111000 000000 00001123676665
Q ss_pred -CcEEEEEcCCCCCCCCC-C-cceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCC
Q psy14338 1549 -GVKVIIANPETKGQCGD-S-HLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAG 1625 (1761)
Q Consensus 1549 -~~~~~v~d~~~~~~~p~-G-~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d 1625 (1761)
+..++|+|+++++++|. | ++|||+|+|+.++.||++ +++.|.+.| .++||+|||+|++ |
T Consensus 366 ~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~---~~~~~~~~~---------~~g~~~TGDl~~~------d 427 (545)
T PRK08162 366 LQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLK---NPKATEEAF---------AGGWFHTGDLAVL------H 427 (545)
T ss_pred CcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcC---ChhhhHHHh---------hCCCcccCceEEE------c
Confidence 44688999877888886 3 479999999999999999 999999998 3579999999999 9
Q ss_pred CCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-Cchh
Q psy14338 1626 VAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESE 1699 (1761)
Q Consensus 1626 ~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~ 1699 (1761)
+| |+ ++|+||.||+||++|+||+|.|||+ ++.+||+|.+|+|++. ++.++++++... ...+
T Consensus 428 ~d--------g~----l~~~GR~~~~i~~~G~~v~~~eIE~-~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~ 494 (545)
T PRK08162 428 PD--------GY----IKIKDRSKDIIISGGENISSIEVED-VLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASAT 494 (545)
T ss_pred CC--------cc----EEEEecccceEEeCCEEECHHHHHH-HHHhCCcccEEEEEeeeccccCceEEEEEEeCCCCCCC
Confidence 99 99 9999999999999999999999999 8999999999999974 456888887643 3356
Q ss_pred HhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1700 ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1700 ~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
.+++++++++. |+ .|++|..++ +. +||+|+|||++|+.|++.+.
T Consensus 495 ~~~l~~~~~~~-l~-~~~~P~~~~-~~--~iP~t~~gK~~r~~l~~~~~ 538 (545)
T PRK08162 495 EEEIIAHCREH-LA-GFKVPKAVV-FG--ELPKTSTGKIQKFVLREQAK 538 (545)
T ss_pred HHHHHHHHHHh-cc-cccCCcEEE-ec--ccCCCCCcCCcHHHHHHHHh
Confidence 77999999987 88 999999886 46 79999999999999998864
|
|
| >PRK07798 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-52 Score=545.11 Aligned_cols=490 Identities=18% Similarity=0.208 Sum_probs=379.6
Q ss_pred cccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHH
Q psy14338 1165 GYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 1244 (1761)
Q Consensus 1165 ~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~ 1244 (1761)
+.+.+.+.+ +++|+++|+. ++++.+||.||.++++++|+.|.+. |+++||+|+|+++|++++++++|||
T Consensus 5 l~~~~~~~a-----~~~p~~~a~~-----~~~~~~ty~el~~~~~~la~~L~~~-g~~~~~~v~v~~~n~~~~~~~~~a~ 73 (533)
T PRK07798 5 IADLFEAVA-----DAVPDRVALV-----CGDRRLTYAELEERANRLAHYLIAQ-GLGPGDHVGIYARNRIEYVEAMLGA 73 (533)
T ss_pred HHHHHHHHH-----HhCCCceEEE-----ECCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 344455554 4789999999 6778999999999999999999998 9999999999999999999999999
Q ss_pred HHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----cccccccCC--ccc----cCCC
Q psy14338 1245 LYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIKSWP--TIL----DTDD 1313 (1761)
Q Consensus 1245 l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~----~~~~ 1313 (1761)
+++|++++|++|.+|.+ ++.++++++++++++++......+...... ..+...... ... ...+
T Consensus 74 ~~~G~~~v~l~~~~~~~------~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (533)
T PRK07798 74 FKARAVPVNVNYRYVED------ELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYED 147 (533)
T ss_pred HhcCeEEEecCcCCCHH------HHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHH
Confidence 99999999999988877 999999999999999998766555443211 001010000 000 0000
Q ss_pred CccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc---------Cc------CCCCeEEEEeC
Q psy14338 1314 MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC---------EL------YPSRHIALCLD 1378 (1761)
Q Consensus 1314 ~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~---------~~------~~~d~~~~~~~ 1378 (1761)
................+.++|+|||||||.||||+++|+++..........+ .+ ..+++++..+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 227 (533)
T PRK07798 148 ALAAGSPERDFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPP 227 (533)
T ss_pred HHhccCCcCCCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecc
Confidence 0000000001111223457999999999999999999999987655433221 11 45577788888
Q ss_pred CccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHH-HHHhhhcCCcchhhccCCCCCcc
Q psy14338 1379 PYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVME-LCTKGLSGSIPQLKARNIALGCV 1457 (1761)
Q Consensus 1379 ~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~-~l~~~~~~~~~~~~~~~~~l~~L 1457 (1761)
++|..++ +.++.+|+.|+++++.+.. .+++..+++.|+++++|++.++|+.+. .+.+.+. .....+++++
T Consensus 228 l~~~~~~-~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~------~~~~~~~~~l 298 (533)
T PRK07798 228 LMHGAGQ-WAAFAALFSGQTVVLLPDV--RFDADEVWRTIEREKVNVITIVGDAMARPLLDALE------ARGPYDLSSL 298 (533)
T ss_pred hhhhhhH-HHHHHHHhcCceEEEecCC--CcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc------ccccCCCCce
Confidence 8888887 5789999999999999843 478999999999999999999987654 3433221 1234567899
Q ss_pred eEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCc
Q psy14338 1458 RTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHS 1537 (1761)
Q Consensus 1458 r~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1537 (1761)
|.+++||+++++ .+.++|.+.++. ..+++.||+||++.+...... . + +
T Consensus 299 ~~i~~gG~~~~~-~~~~~~~~~~~~-----~~~~~~YG~tE~~~~~~~~~~---~--------------------~-~-- 346 (533)
T PRK07798 299 FAIASGGALFSP-SVKEALLELLPN-----VVLTDSIGSSETGFGGSGTVA---K--------------------G-A-- 346 (533)
T ss_pred EEEEECCCCCCH-HHHHHHHHHcCC-----CeEEeeecccccccccccCCC---C--------------------C-C--
Confidence 999999999998 788888877632 579999999997543221100 0 0 0
Q ss_pred cceeccc--cccCCcEEEEEcCCCCCCCCCCcc--eEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeC
Q psy14338 1538 LCLLESG--KLLPGVKVIIANPETKGQCGDSHL--GEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTG 1613 (1761)
Q Consensus 1538 ~~~~~iG--~p~~~~~~~v~d~~~~~~~p~G~~--GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTG 1613 (1761)
.+.| ++.++..++|+|++ +++++.|.. |+|+. |+.++.||+| +|+.|++.|... ++.+||+||
T Consensus 347 ---~~~g~~~~~~~~~~~i~~~~-~~~~~~g~~~~g~l~~-~~~~~~gy~~---~~~~t~~~f~~~-----~~~~~~~TG 413 (533)
T PRK07798 347 ---VHTGGPRFTIGPRTVVLDED-GNPVEPGSGEIGWIAR-RGHIPLGYYK---DPEKTAETFPTI-----DGVRYAIPG 413 (533)
T ss_pred ---ccCCCCccCCCceEEEECCC-CCCCCCCCCCeeEEEe-ecCccccccC---ChhhhHHhhccC-----CCCceEEcC
Confidence 1134 78889999999966 779999988 77665 5679999999 999999998531 357899999
Q ss_pred ceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEE
Q psy14338 1614 YLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLV 1688 (1761)
Q Consensus 1614 Dlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~ 1688 (1761)
|+|++ |+| |+ ++++||+||+||++|++|+|.|||+ ++.++|+|.+|+|++. ++.++
T Consensus 414 D~~~~------~~~--------g~----l~~~GR~~~~i~~~G~~v~~~eIE~-~l~~~~~v~~~~v~~~~~~~~~~~~~ 474 (533)
T PRK07798 414 DRARV------EAD--------GT----ITLLGRGSVCINTGGEKVFPEEVEE-ALKAHPDVADALVVGVPDERWGQEVV 474 (533)
T ss_pred cEEEE------cCC--------Cc----EEEEccccceEecCCEEeCHHHHHH-HHHhCccceeEEEEeccCcccCceEE
Confidence 99999 999 99 9999999999999999999999999 8999999999999974 45677
Q ss_pred EEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1689 VVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1689 a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
++++.. +...+.++++++++++ |+ .|++|..+++++ +||+|++||+||+.|+++..
T Consensus 475 ~~v~~~~~~~~~~~~l~~~l~~~-l~-~~~~P~~i~~~~--~iP~t~~GK~~~~~~~~~~~ 531 (533)
T PRK07798 475 AVVQLREGARPDLAELRAHCRSS-LA-GYKVPRAIWFVD--EVQRSPAGKADYRWAKEQAA 531 (533)
T ss_pred EEEEECCCCCCCHHHHHHHHhhh-cc-cCCCCeEEEEcc--cCCCCCcchhhHHHHhhhhc
Confidence 777764 3345778999999987 88 899999999999 99999999999999999874
|
|
| >PRK08308 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-51 Score=516.36 Aligned_cols=400 Identities=17% Similarity=0.183 Sum_probs=339.7
Q ss_pred CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHH
Q psy14338 1194 SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIV 1273 (1761)
Q Consensus 1194 ~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il 1273 (1761)
.+++++||+||.++++++|+.|. . |+++|++|+|+++|+++++++++|++++|++++||||..|.+ ++..++
T Consensus 4 ~~~~~~ty~el~~~~~~~a~~l~-~-~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~------~~~~~~ 75 (414)
T PRK08308 4 VNDEEYSKSDFDLRLQRYEEMEQ-F-QEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKE------AAIRMA 75 (414)
T ss_pred ecCceecHHHHHHHHHHHHHHHH-c-CCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHH------HHHHHH
Confidence 46789999999999999999985 5 899999999999999999999999999999999999988887 999999
Q ss_pred HhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHH
Q psy14338 1274 DVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAA 1353 (1761)
Q Consensus 1274 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~ 1353 (1761)
+++++++++++..... ... .....+++++|++|||||||.||||+++|++
T Consensus 76 ~~~~~~~~i~~~~~~~-------------------~~~-----------~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~ 125 (414)
T PRK08308 76 KRAGCHGLLYGESDFT-------------------KLE-----------AVNYLAEEPSLLQYSSGTTGEPKLIRRSWTE 125 (414)
T ss_pred HhCCCCEEEecCcccc-------------------ccc-----------CCCCCCCCceEEEECCCCCCCCcEEEEehHh
Confidence 9999999998753100 000 0123568899999999999999999999999
Q ss_pred HHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHH
Q psy14338 1354 VTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVM 1433 (1761)
Q Consensus 1354 l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~ 1433 (1761)
+.+.+......+++..+|+.+...|++|.++++..++.+|..|+++++.+. +++..+++.++++++|+++++|+++
T Consensus 126 l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~ 201 (414)
T PRK08308 126 IDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN----KNPKFALNILRNTPQHILYAVPLML 201 (414)
T ss_pred HHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC----CCHHHHHHHHHHhCCeEEEcCHHHH
Confidence 999999888889998889988899999999987788999999999999874 6899999999999999999999999
Q ss_pred HHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCc
Q psy14338 1434 ELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPS 1513 (1761)
Q Consensus 1434 ~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~ 1513 (1761)
..+.+... ...+++.+++||+++++ .+.++|.+.. ..+++.||+||++.++....
T Consensus 202 ~~l~~~~~-----------~~~~l~~~~~~G~~l~~-~~~~~~~~~~-------~~~~~~YG~tE~~~~~~~~~------ 256 (414)
T PRK08308 202 HILGRLLP-----------GTFQFHAVMTSGTPLPE-AWFYKLRERT-------TYMMQQYGCSEAGCVSICPD------ 256 (414)
T ss_pred HHHHhcCC-----------ccccccEEEEccCCCCH-HHHHHHHHhC-------ChhhhccCccccCCeeecCC------
Confidence 99976321 12368899999999998 7777776642 47999999999764332110
Q ss_pred eeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhH
Q psy14338 1514 CVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYA 1593 (1761)
Q Consensus 1514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~ 1593 (1761)
. ....++|+|++++++++.+. .|.+|||++++
T Consensus 257 --------~---------------~~~~~~G~p~~~~~~~~~~~-------~~~~gel~v~~------------------ 288 (414)
T PRK08308 257 --------M---------------KSHLDLGNPLPHVSVSAGSD-------ENAPEEIVVKM------------------ 288 (414)
T ss_pred --------C---------------CCCCccCccCCCeEEEEecC-------CCCCceEEEEc------------------
Confidence 0 01134999999999999763 25679999964
Q ss_pred HHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhcc
Q psy14338 1594 QQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHK 1673 (1761)
Q Consensus 1594 ~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p 1673 (1761)
+++||+|||+|++ |+| |+ ++|+||.||+||++|+||+|.|||+ ++.++|
T Consensus 289 ------------~~~~~~TGDl~~~------~~d--------g~----l~~~GR~~~~ik~~G~~v~p~eIE~-~l~~~~ 337 (414)
T PRK08308 289 ------------GDKEIFTKDLGYK------SER--------GT----LHFMGRMDDVINVSGLNVYPIEVED-VMLRLP 337 (414)
T ss_pred ------------CCceEECCceEEE------CCC--------cc----EEEecccCCeEEECCEEECHHHHHH-HHHhCC
Confidence 1479999999999 999 99 9999999999999999999999999 899999
Q ss_pred CcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHH
Q psy14338 1674 KIAECAVFTW-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 1744 (1761)
Q Consensus 1674 ~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~ 1744 (1761)
+|.+|+|++. ++.++++++... ..+.++++++++++ |+ .|++|..+++++ +||+|++||++|+.|+
T Consensus 338 ~v~~a~v~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~l~~~-l~-~~~~P~~i~~v~--~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 338 GVQEAVVYRGKDPVAGERVKAKVISHE-EIDPVQLREWCIQH-LA-PYQVPHEIESVT--EIPKNANGKVSRKLLE 408 (414)
T ss_pred CeeEEEEEeccCCCCCceEEEEEEeCC-CCCHHHHHHHHHHh-Cc-cccCCcEEEEec--cCCCCCCcCeehhhhh
Confidence 9999999874 456777777653 56778999999997 88 899999999999 9999999999999654
|
|
| >KOG1175|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-51 Score=499.13 Aligned_cols=493 Identities=18% Similarity=0.219 Sum_probs=391.6
Q ss_pred CCCCCceEEccCC-CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCC
Q psy14338 1181 APVPPGVSSVDTR-SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 1259 (1761)
Q Consensus 1181 ~P~~~Av~~~d~~-~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P 1259 (1761)
-++.+|+++++.. .+...+||.||.+++.++|+.|.+. |+++||+|++.+|+.+++++++|||.++|++..++
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~-g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v----- 151 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKC-GLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSV----- 151 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhc-CCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEe-----
Confidence 4889999987543 3445589999999999999999976 99999999999999999999999999999999999
Q ss_pred CCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-------cccc---cccCCc---------cccCCCCccchhh
Q psy14338 1260 QNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-------NVVD---IKSWPT---------ILDTDDMPKKKLA 1320 (1761)
Q Consensus 1260 ~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-------~~~~---~~~~~~---------~~~~~~~~~~~~~ 1320 (1761)
...++...+...+.+++++++++.+......+..... ..+. ...+.. .............
T Consensus 152 -~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~~ 230 (626)
T KOG1175|consen 152 -FAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASPE 230 (626)
T ss_pred -eccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCCC
Confidence 4466666999999999999999987543322111100 0000 000000 0000000111111
Q ss_pred hccCCCCCCCEEEEEeccCCCCCCceEEccHHH-HHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceE
Q psy14338 1321 ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAA-VTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHS 1399 (1761)
Q Consensus 1321 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~-l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~ 1399 (1761)
.+....+.+|+.+|+|||||||.||||.+++.+ ++..+......+++.++|+.+......+..+..+..+.+|++|+|+
T Consensus 231 ~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~ 310 (626)
T KOG1175|consen 231 HPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATV 310 (626)
T ss_pred CCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEE
Confidence 224556789999999999999999999999886 5666777788889999998888888888888867678899999999
Q ss_pred EEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHH
Q psy14338 1400 ILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKL 1479 (1761)
Q Consensus 1400 vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~ 1479 (1761)
++.+... +++..+++.+.+++||+++..|++++.|.... .......++++||++.++||++.+ +..++|.+.
T Consensus 311 vl~~g~p--~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~-----~~~~~~~~~~sLk~~~S~Gepi~~-~~~ew~~~~ 382 (626)
T KOG1175|consen 311 VLYEGPP--FDPGRIWKILDKYKVTVLYTAPTAYRLLRRLG-----QEDVTSYSLKSLRTCGSVGEPINP-EAWEWWKRV 382 (626)
T ss_pred EEEcCCC--CChhhhhhhHhhcceEEEEeccHHHHHHHHhc-----cccccccccceEEEEeecCccCCc-chHHHHHHh
Confidence 9998653 49999999999999999999999999886532 222334455789999999999999 788888887
Q ss_pred HhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCC
Q psy14338 1480 FSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPET 1559 (1761)
Q Consensus 1480 ~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~ 1559 (1761)
+.. ..|...||+||++..+.....+.. ..+.++.|+|.+|..+.|+|+ +
T Consensus 383 ~~~-----~pv~e~~~qtEtG~~~i~~~~g~~-------------------------p~~pg~~~~p~~g~~v~i~de-~ 431 (626)
T KOG1175|consen 383 TGL-----DPIYETYGQTETGGICITPKPGKL-------------------------PIKPGSAGKPFPGYDVQILDE-N 431 (626)
T ss_pred cCc-----cchhhceeeeccCceeeeccCCCC-------------------------CcCccccCCCCCCcceEEECC-C
Confidence 653 268999999999887765544321 112345999999999999996 5
Q ss_pred CCCCCCC-cceEEEEcCC---cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCC
Q psy14338 1560 KGQCGDS-HLGEIWVQSP---HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGV 1635 (1761)
Q Consensus 1560 ~~~~p~G-~~GEL~i~g~---~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~ 1635 (1761)
|+.++.+ +.|||+++.+ +.+++||| |++ +|..-+|. .-.|+|.|||.+++ |+|
T Consensus 432 g~~~~~~~~~G~l~~~~~~P~~~~r~~~~---n~e----rf~~~yf~--k~pg~y~tGD~~~r------d~d-------- 488 (626)
T KOG1175|consen 432 GNELPPSTGNGELRLKPPWPPGMFRTLWG---NHE----RFRAAYFK--KFPGYYFTGDGGRR------DED-------- 488 (626)
T ss_pred CCCcCCCCceeEEEEeCCCCccccccccC---CHH----Hhhhhhcc--cCCceEEecCceEE------cCC--------
Confidence 8888887 8999999975 77999999 887 45444443 24689999999999 999
Q ss_pred CcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhH----hhHHHH
Q psy14338 1636 SKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEA----LDLVPL 1706 (1761)
Q Consensus 1636 G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~----~~l~~~ 1706 (1761)
|+ ++++||.||+|+++|+|+...|||+ ++..||.|.|++||+. ||.+.+||++.....+. ++|+.+
T Consensus 489 GY----~~i~GR~DDviNvsGhRigtaEIE~-al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~ 563 (626)
T KOG1175|consen 489 GY----YWILGRVDDVINVSGHRIGTAEIES-ALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKH 563 (626)
T ss_pred ce----EEEEecccccccccceeecHHHHHH-HHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHH
Confidence 99 9999999999999999999999999 8899999999999984 56899999986544443 466667
Q ss_pred HHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1707 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1707 l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
+++. +. .|..|+.|++++ .||+|.|||+-|++|++.....+
T Consensus 564 VR~~-ig-p~a~P~~I~~v~--~LPkTrSGKimRr~lrki~~g~~ 604 (626)
T KOG1175|consen 564 VRSV-IG-PYAVPRLIVFVP--GLPKTRSGKIMRRALRKIASGKA 604 (626)
T ss_pred HHhh-cC-cccccceeEecC--CCCccccchhHHHHHHHHhccCc
Confidence 7775 76 899999999999 99999999999999999986553
|
|
| >KOG1256|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-51 Score=497.48 Aligned_cols=511 Identities=17% Similarity=0.172 Sum_probs=384.5
Q ss_pred cccccccccccccCCCCcCCCCCCCceEEcc---CCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHH
Q psy14338 1161 YARTGYLGFLRRTSPAGVAGAPVPPGVSSVD---TRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDL 1237 (1761)
Q Consensus 1161 ~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d---~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~ 1237 (1761)
..+|+++.|.+.+. .+|+.+++-... .......+||.|..+++.+++..|++. |+++++.|+|+.-|++||
T Consensus 73 ~~~T~~~~f~~~~~-----~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~l-G~~~~~~VGIy~~N~pEW 146 (691)
T KOG1256|consen 73 GPLTLYEGFRRSVE-----KSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKL-GVKEDSKVGIYAFNRPEW 146 (691)
T ss_pred CcccHHHHhhcchh-----ccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHh-CCCCCceEEEeccCChhh
Confidence 34677888877765 779999987633 445678999999999999999999988 999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEec-hhHHHHHhhhccc-------ccc---------
Q psy14338 1238 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSN-QNVIKLLKSKEAS-------NVV--------- 1300 (1761)
Q Consensus 1238 iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~-~~~~~~~~~~~~~-------~~~--------- 1300 (1761)
+++.+||...|++.|||.. .++++.+++|++++.+.+++++ +.....+...... .++
T Consensus 147 iis~~a~~~~~~v~VplYd------Tlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~ 220 (691)
T KOG1256|consen 147 IISEMACYAYSLVNVPLYD------TLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDEL 220 (691)
T ss_pred HHhHHHHHhcCCEEeeccc------CCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhh
Confidence 9999999999999999966 4555699999999999999999 4444433321110 000
Q ss_pred ---------ccccCCccccCCCCccchhhhcc-CCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHH---HH---
Q psy14338 1301 ---------DIKSWPTILDTDDMPKKKLAALY-RAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LA--- 1364 (1761)
Q Consensus 1301 ---------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~---~~--- 1364 (1761)
.+-+|.++...... ..... .++.|+|.|.|+|||||||.|||||+||+|++..+.... ..
T Consensus 221 ~~~~~~~gv~v~S~~e~~~lG~~----~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~ 296 (691)
T KOG1256|consen 221 KEKAENNGVEVYSWDEFEELGKK----NQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENA 296 (691)
T ss_pred hhhhhcCCeEEEEHHHHHhhccc----ccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccc
Confidence 11122222222210 11112 467899999999999999999999999999999654311 11
Q ss_pred cCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCc
Q psy14338 1365 CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSI 1444 (1761)
Q Consensus 1365 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~ 1444 (1761)
.....+|..++.+|+.|.+.-+.+.+ .+..|+++.+... |+..+.+.|++.++|.+.+||.+|+.+.+.+.+.+
T Consensus 297 ~~~~~~dv~lSyLPLAHi~er~~~~~-~~~~G~~IgF~~g-----D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~ 370 (691)
T KOG1256|consen 297 KATVGDDVYLSYLPLAHIFERVVELY-TFYIGAKIGFARG-----DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQV 370 (691)
T ss_pred cccccCceEEEeCcHHHHHHHHHHHh-HhhcccEEEEecC-----ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHH
Confidence 12233689999999999988866544 4589999999884 89999999999999999999999998866543322
Q ss_pred chhh-------------------ccCCC-------------------CCcceEEEeecCCCChHHHHHHHHHHHhhCCCC
Q psy14338 1445 PQLK-------------------ARNIA-------------------LGCVRTCVVVAEERPRIHLTSAFSKLFSALGLS 1486 (1761)
Q Consensus 1445 ~~~~-------------------~~~~~-------------------l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~ 1486 (1761)
.... ..+.. -..+|.+++|++|+++ ++..-++.++.
T Consensus 371 ~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~-ev~~F~r~~~g----- 444 (691)
T KOG1256|consen 371 QKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSP-EVLTFFRAALG----- 444 (691)
T ss_pred hcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCH-HHHHHHHHhcC-----
Confidence 2211 00000 1468999999999999 77665555442
Q ss_pred CccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCC
Q psy14338 1487 PRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDS 1566 (1761)
Q Consensus 1487 e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G 1566 (1761)
+.+.++||+|||++.++... +.+...+++|.|+|+++++++|....+--+.|
T Consensus 445 -~~v~eGYGlTEts~g~~~~~---------------------------~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~ 496 (691)
T KOG1256|consen 445 -CRVLEGYGLTETSAGTTLTL---------------------------PGDNVLGSVGPPVPGNEVKLVDVPEMNYDADG 496 (691)
T ss_pred -ceeeecccccccCCceEecc---------------------------CCCCCCCCcCCcccCceEEEechHHhCcCcCC
Confidence 78999999999873222111 11124577999999999999998767777888
Q ss_pred cceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEc
Q psy14338 1567 HLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVG 1646 (1761)
Q Consensus 1567 ~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~G 1646 (1761)
..|||||+|++++.||++ +|++|++.| +.+||++|||+|+| +++ |. |.++|
T Consensus 497 ~~GEIcirG~~Vf~GYyK---~p~~T~e~i--------deDGWLhTGDiG~~------~p~--------G~----l~Iid 547 (691)
T KOG1256|consen 497 SKGEICVRGPNVFMGYYK---DPEKTAEAI--------DEDGWLHTGDIGEW------DPN--------GT----LKIID 547 (691)
T ss_pred CcceEEEecchhceeccC---ChHHHhhhh--------ccccccccccceeE------CCC--------cc----EEEEe
Confidence 899999999999999999 999999999 78999999999999 999 99 99999
Q ss_pred ccCCeEEe-CCeecChHHHHHHHHHhccCcceeEEEeeCC--eEEEEEEeCCCchh----H-------------------
Q psy14338 1647 ALDETIML-RGMRYHPIDIENSVMRAHKKIAECAVFTWTN--LLVVVVELDGNESE----A------------------- 1700 (1761)
Q Consensus 1647 R~dd~Iki-~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~~--~~~a~v~~~~~~~~----~------------------- 1700 (1761)
|+|+++|. .|++|.|..||+ +..+.+-|.+.+|.+... .++|+|+++.+... .
T Consensus 548 RkK~ifklaqGEyVaPe~IEn-iy~~~~~V~qi~V~g~s~~~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~ 626 (691)
T KOG1256|consen 548 RKKNIFKLAQGEYVAPEKIEN-IYKRSLPVQQIFVLGDSLRSFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEA 626 (691)
T ss_pred cccceEEcCCCCccChHHHHH-HHhcCCceEEEEEECCcchhcEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHH
Confidence 99999996 799999999999 888899999999998654 68888887421100 0
Q ss_pred --hhHHHHHHHHHhhhcCceeeEEEEECC----CCccCCCchhhhHHHHHHHHHcCCCChhhhhc
Q psy14338 1701 --LDLVPLVTNAVLEEHHLIVGVAVVVDP----GVVPINSRGEKQRMHLRDGFLADQLDPIYVAY 1759 (1761)
Q Consensus 1701 --~~l~~~l~~~~Lp~~~~vP~~i~~v~~----~~lP~t~~GKvdR~~L~~~~~~~~~~~~~~~~ 1759 (1761)
.++.+..++..|. .+..-..|...+. +.=-+||+=|+.|..|.+.| +.+++++|...
T Consensus 627 vl~el~~~~~~~~l~-~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~y-k~~Id~mY~~~ 689 (691)
T KOG1256|consen 627 VLSELVKVGKENGLK-GFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYY-KKQIDELYKEI 689 (691)
T ss_pred HHHHHHHHHhhhhcc-ChhhEeeEEEecccccccCCccchhhhhhhHHHHHHH-HHHHHHHHhhc
Confidence 1222222222243 3333344444321 02235899999999999999 78899998754
|
|
| >TIGR01923 menE O-succinylbenzoate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-51 Score=516.83 Aligned_cols=431 Identities=18% Similarity=0.188 Sum_probs=351.8
Q ss_pred CHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCe
Q psy14338 1200 TCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSV 1279 (1761)
Q Consensus 1200 TY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~ 1279 (1761)
||+||.++++++|+.|.+. |+++||+|+|+++|++++++++|||+++|++++|++|..|.+ ++..++++++++
T Consensus 1 Ty~~l~~~~~~~a~~l~~~-g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~------~~~~~~~~~~~~ 73 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQ-GIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTEN------ERTNQLEDLDVQ 73 (436)
T ss_pred CHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHH------HHHHHHHhcCCC
Confidence 8999999999999999999 999999999999999999999999999999999999987777 999999999999
Q ss_pred EEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHH
Q psy14338 1280 LVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR 1359 (1761)
Q Consensus 1280 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~ 1359 (1761)
++++++...... +....+........ ...........+++++++|||||||.||||+++|+++...+.
T Consensus 74 ~~i~~~~~~~~~--------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~ 141 (436)
T TIGR01923 74 LLLTDSLLEEKD--------FQADSLDRIEAAGR----YETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAV 141 (436)
T ss_pred EEEEcCcccccc--------eeecchHhhhhccc----ccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHH
Confidence 999987642110 00000111000000 000111234568899999999999999999999999999999
Q ss_pred HHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhh
Q psy14338 1360 SMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKG 1439 (1761)
Q Consensus 1360 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~ 1439 (1761)
.....+++.++|+++...+++|..++ ..++.++..|+++++.+. + ..+++.|+++++|++.++|+++..+++.
T Consensus 142 ~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~----~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~ 214 (436)
T TIGR01923 142 GSKENLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDK----F--NQLLEMIANERVTHISLVPTQLNRLLDE 214 (436)
T ss_pred HHHhhcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecch----H--HHHHHHHHHhCCeEEEeHHHHHHHHHhC
Confidence 99999999999999999998887776 568899999999999874 2 3899999999999999999999999762
Q ss_pred hcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecc
Q psy14338 1440 LSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDL 1519 (1761)
Q Consensus 1440 ~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 1519 (1761)
....+++|.+++||+++++ .+.+++.+. | ..+++.||+||++..+......
T Consensus 215 -----------~~~~~~l~~~~~~G~~~~~-~~~~~~~~~----~---~~~~~~YG~tE~~~~~~~~~~~---------- 265 (436)
T TIGR01923 215 -----------GGHNENLRKILLGGSAIPA-PLIEEAQQY----G---LPIYLSYGMTETCSQVTTATPE---------- 265 (436)
T ss_pred -----------cCCCCceEEEEECCCCCCH-HHHHHHHHh----C---CceeeEecCCccchhccCcCcc----------
Confidence 1112689999999999998 676666542 3 5799999999976533221100
Q ss_pred cccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhh
Q psy14338 1520 RALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSAR 1599 (1761)
Q Consensus 1520 ~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~ 1599 (1761)
......++|+|+++++++|.+++. ++.|||+|+|+.++.||++ +++.+...|
T Consensus 266 ----------------~~~~~~~~G~~~~~~~~~i~~~~~------~~~Gel~v~~~~~~~gy~~---~~~~~~~~~--- 317 (436)
T TIGR01923 266 ----------------MLHARPDVGRPLAGREIKIKVDNK------EGHGEIMVKGANLMKGYLY---QGELTPAFE--- 317 (436)
T ss_pred ----------------ccccccCCCccCCCcEEEEEeCCC------CCceEEEEECCccchhhCC---Chhhhhhhh---
Confidence 000011389999999999943221 2779999999999999999 888887665
Q ss_pred cccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeE
Q psy14338 1600 LVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECA 1679 (1761)
Q Consensus 1600 p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~ 1679 (1761)
.++||+|||+|++ ++| |+ +++.||.||+||++|++|+|.|||+ ++.++|.|.+++
T Consensus 318 ------~~~~~~TGD~~~~------~~d--------g~----~~~~GR~~d~i~~~G~~v~~~~iE~-~l~~~~~v~~~~ 372 (436)
T TIGR01923 318 ------QQGWFNTGDIGEL------DGE--------GF----LYVLGRRDDLIISGGENIYPEEIET-VLYQHPGIQEAV 372 (436)
T ss_pred ------cCCCeeccceEEE------cCC--------CC----EEEeccccCeEEeCCEeeCHHHHHH-HHHhCCCeeEEE
Confidence 4689999999999 899 99 9999999999999999999999999 889999999999
Q ss_pred EEee-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHH
Q psy14338 1680 VFTW-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHL 1743 (1761)
Q Consensus 1680 Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L 1743 (1761)
|++. ++.++++++..+ ..+..++.+++++. |+ .|++|..+++++ +||+|++||++|++|
T Consensus 373 v~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~l~~~-l~-~~~~p~~i~~~~--~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 373 VVPKPDAEWGQVPVAYIVSES-DISQAKLIAYLTEK-LA-KYKVPIAFEKLD--ELPYNASGKILRNQL 436 (436)
T ss_pred EeCCcchhcCCeeEEEEEECC-CCCHHHHHHHHHHh-hh-CCCCCeEEEEec--CCCCCCCCceecccC
Confidence 9974 346777777654 45677899999986 88 999999999999 999999999999875
|
This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate. |
| >COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-50 Score=535.24 Aligned_cols=413 Identities=18% Similarity=0.232 Sum_probs=343.0
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|.+++.++|+++|+.+.+ .++||+||+.+++++|+.|+ +.|+++++.|++++++| .++
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~~------~~lty~el~~~a~~la~~l~--------~~g~~~~~~V~i~~~rs--~~~ 290 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRGG------QQLTYAELDARANRLARLLI--------SLGVGPGETVAILADRS--LEL 290 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecCC------CcccHHHHHHHHHHHHHHHH--------HcCCCCCCeEEEEcCCC--HHH
Confidence 689999999999999999998764 58999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccC
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAK 240 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1761)
+++++|++|+|++|||+||.+|.+ |+.+++++++++++++............. +.. ......
T Consensus 291 i~~~l~ilkaG~~yvP~d~~~P~~-----r~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~----------~~~~~~ 352 (642)
T COG1020 291 VVALLAVLKAGAAYVPLDPLYPAE-----RLAYILEDSRPTLLLTQAHLRVDDVGLPG---LAL----------DDALSE 352 (642)
T ss_pred HHHHHHHHhcCCeEecCCCCChHH-----HHHHHHhhcCccEEEeccccccccccCCc---ccc----------cccccc
Confidence 999999999999999999999977 99999999999999998443221111100 000 000000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhc
Q psy14338 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLN 320 (1761)
Q Consensus 241 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~ 320 (1761)
.+..........+++++|++|||||||+||||+++|+++.+.+.+....++++.+|++++..+++||.+.++ +|.++..
T Consensus 353 ~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~-~f~~l~~ 431 (642)
T COG1020 353 IPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFE-IFGALLE 431 (642)
T ss_pred CCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHH-HHHHHhC
Confidence 010001122345689999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCC--CCCCCceeEEEecCCCccCCHHHHHHHHH
Q psy14338 321 GMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK--DISLSSLRLLLVGDGANPWSLSSCDQFLS 398 (1761)
Q Consensus 321 G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~--~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~ 398 (1761)
|+++++.+... ..++..+.+.+.++++|++..+|+ ++..++...... ....+.+|.+++| |++++..+..++..
T Consensus 432 G~~l~~~~~~~-~~~~~~l~~~~~~~~vt~~~~~p~-~~~~~~~~~~~~~~~~~~~~lr~~~~g--Ge~l~~~~~~~~~~ 507 (642)
T COG1020 432 GARLVLAPALL-QVDPAALLELLEAQGITVLLLVPL-LLRLLLLAALAPDLISPCERLRQLLSG--GEALPLALVQRLLQ 507 (642)
T ss_pred CCEEEecCccc-cCCHHHHHHHHHHcCCEEEEecHH-HHHHHHhchhhccccCCcccccEEEEc--CCCCCHHHHHHHHH
Confidence 99999999665 689999999999999999998864 666665542221 1222359999999 89999999999988
Q ss_pred HhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEE
Q psy14338 399 VFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478 (1761)
Q Consensus 399 ~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~ 478 (1761)
.... . ..++|.|||||+++.+...... ... .. ..+||+|++|++++|+
T Consensus 508 ~~~~-~---~~l~~~ygpTe~~~~~~~~~~~------------------------~~~---~~-~~piG~p~~n~~~~il 555 (642)
T COG1020 508 LAAL-A---RRLLNLYGPTEATLDAPSFPIS------------------------AEL---ES-RVPIGRPVANTQLYIL 555 (642)
T ss_pred hccc-c---ceEeeccCccHHhhheeeEEcc------------------------ccc---CC-CCCcceeeCCCeEEEE
Confidence 7531 1 1499999999987765543321 000 01 5689999999999999
Q ss_pred eCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCe
Q psy14338 479 KMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGL 558 (1761)
Q Consensus 479 d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~q 558 (1761)
|..++ ++|.|+.|||||+|.++++||+|+|++|+++|+.+ ++|||||++|+++||.++|+||.|+|
T Consensus 556 d~~~~--~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~------------~~y~tgD~~r~~~dg~~e~lgr~D~q 621 (642)
T COG1020 556 DQGLR--PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIAL------------RLYRTGDLARPLADGALEYLGRKDSQ 621 (642)
T ss_pred CCCCC--cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhc------------cCccCCCeeeECCCCeEEEeccccce
Confidence 97675 69999999999999999999999999999999832 59999999999999999999999999
Q ss_pred EEECCcccChHHHHHHHHhc
Q psy14338 559 MTVTGRKHNADDIIATVLAV 578 (1761)
Q Consensus 559 vki~G~rIe~~eIE~~l~~~ 578 (1761)
||++|+|||++|||.++.++
T Consensus 622 vki~g~Riel~eie~~l~~~ 641 (642)
T COG1020 622 VKIRGFRIELGEIEAALAEQ 641 (642)
T ss_pred eEeceEecCcHHHHHHHhcC
Confidence 99999999999999988764
|
|
| >KOG1180|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-51 Score=466.83 Aligned_cols=514 Identities=15% Similarity=0.165 Sum_probs=375.7
Q ss_pred CcchhHHHHHHHHhhhcCCCcEEEEEC---------CCCc--------eeEEEeHHHHHHHHHHHHHHhhcCCCCccccC
Q psy14338 78 GLPRNLEAAIQRYGSATYKAPVATVLD---------PNGK--------LSITLTYGKLLSRSLKVAYTLLTKPINRTSES 140 (1761)
Q Consensus 78 ~~~~~l~~~~~~~a~~~pd~~Av~~~d---------~~g~--------~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~ 140 (1761)
+-..|+.++|++.+.++.++.++-..+ .+|+ ....+||.|+..++.++|+.|. ..
T Consensus 38 ~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~--------~l 109 (678)
T KOG1180|consen 38 PGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLV--------KL 109 (678)
T ss_pred CCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHH--------Hh
Confidence 345799999999999999999885431 1232 2257899999999999999999 88
Q ss_pred CCCCCCE-EEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-
Q psy14338 141 SLKSGDR-IALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA- 218 (1761)
Q Consensus 141 Gv~~g~~-V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~- 218 (1761)
|++|++. |+|+.+.+ .+|+++.+||++.+...|-+..++..+ -+.|-|++++++.++|+.+....+.....
T Consensus 110 G~k~~e~k~~iFa~Tr--aeWm~ta~gC~~q~ipvVT~Y~TLGee-----al~hsl~Et~~~~i~T~~~LL~kl~~~l~~ 182 (678)
T KOG1180|consen 110 GLKPKETKIAIFAETR--AEWMITAQGCFSQNIPVVTAYATLGEE-----ALIHSLNETESTAIFTDSELLPKLKAPLKQ 182 (678)
T ss_pred CCCCCCCeEEEEecch--HHHHHHHHHHHhcCCeEEEEehhcChh-----hhhhhhccccceEEEeCHHHHHHHHHHHhc
Confidence 9997776 99999999 999999999999999999999999987 59999999999999999987664432211
Q ss_pred ----ccceeccC---------C-----CcceeEEeccccC-CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHH
Q psy14338 219 ----GEVVAFKG---------W-----PKLTWFVTEHLAK-TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAM 279 (1761)
Q Consensus 219 ----~~~~~~~~---------~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l 279 (1761)
..++-.+. . ++......+.+.+ ......+..++.|+|+|+|||||||||.|||||++|+|+
T Consensus 183 ~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~Ni 262 (678)
T KOG1180|consen 183 AKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNI 262 (678)
T ss_pred cCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccH
Confidence 11222221 0 1111111111111 111112334458899999999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHH----HHHHHhcCceEEEec
Q psy14338 280 LSHCRALTQAC-HYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASW----MQMITKYRASVAVVK 354 (1761)
Q Consensus 280 ~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l----~~~i~~~~vt~~~~~ 354 (1761)
++.+....... .+.+.|+++.++|+.|.+-+.. -+..++.|+++-..++.+.......+ -..+...++|+|..|
T Consensus 263 VA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~a-E~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~V 341 (678)
T KOG1180|consen 263 VAGVTGVGENVPELGPKDRYIAYLPLAHILELTA-ELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAV 341 (678)
T ss_pred HhhhhhhcccCcccCCCceEEEechHHHHHHHHH-HHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhh
Confidence 99998887766 6889999999999999999985 78999999999888754422112111 234567789999998
Q ss_pred CHHHHHHhhcC---------------------------C---------------CCCCCCCCceeEEEecCCCccCCHHH
Q psy14338 355 SRDLHWGLLAT---------------------------K---------------DHKDISLSSLRLLLVGDGANPWSLSS 392 (1761)
Q Consensus 355 p~~~~~~ll~~---------------------------~---------------~~~~~~l~~Lr~v~~gg~Ge~l~~~~ 392 (1761)
|. .+.+.... . ..+..--..||++++| |+||+++.
T Consensus 342 pA-V~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsG--GapLS~dt 418 (678)
T KOG1180|consen 342 PA-VMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSG--GAPLSPDT 418 (678)
T ss_pred HH-HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeC--CCCCCHHH
Confidence 64 33221000 0 0001112369999999 99999998
Q ss_pred HHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCC
Q psy14338 393 CDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPG 472 (1761)
Q Consensus 393 ~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~ 472 (1761)
.+.+.-.+ .++ +.++||.||++..++..... +...+.+|.|++.
T Consensus 419 QrF~nic~---C~P---v~qGYGLTEtca~~tv~e~~------------------------------d~~~g~vG~pl~c 462 (678)
T KOG1180|consen 419 QRFMNICF---CCP---VLQGYGLTETCAAATVLEPE------------------------------DFSTGRVGAPLPC 462 (678)
T ss_pred HHHHHHhc---ccc---ccccccccchhcccEecChh------------------------------hcccccccCCccc
Confidence 77776666 333 99999999998665543211 2335689999999
Q ss_pred cEEEEEeC-CCCcccCCCCC--ceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeE
Q psy14338 473 CIMTVVKM-DSPSYLCKTDE--VGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLV 549 (1761)
Q Consensus 473 ~~~~I~d~-~~~~~~~p~G~--~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l 549 (1761)
++++++|= ++.- -+.+. .|||+|+|+.+..|||+|||.|++.|.. .++.|||+|||+|+|.+||.|
T Consensus 463 ~eiKLvdw~EgGY--~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~---------~~G~~WF~TGDIGe~~pdG~L 531 (678)
T KOG1180|consen 463 CEIKLVDWEEGGY--FAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTV---------EDGQRWFRTGDIGEFHPDGCL 531 (678)
T ss_pred eEEEEEEhhhcCc--cCCCCCCCceEEecCCccChhhhCChhhhhhhcee---------cCCcEEEeccccceecCCCcE
Confidence 99999993 3321 23333 7999999999999999999999999973 124679999999999999999
Q ss_pred EEEeccCCeEEE-CCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCC----------CCH----
Q psy14338 550 FVCGSRDGLMTV-TGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPD----------CSE---- 614 (1761)
Q Consensus 550 ~~~GR~d~qvki-~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~----------~~~---- 614 (1761)
.+++|++|.||+ +|+.|+++.||+++...+-| ...+|.+. .....++++|+++.. +..
T Consensus 532 kIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V-----~NICvyAd--~~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e 604 (678)
T KOG1180|consen 532 KIIDRKKDLVKLQNGEYISLGKVEAALRSSPYV-----DNICVYAD--SNKSKPVAIVVPNQKHLTKLAEKAGISGSTWE 604 (678)
T ss_pred EEeechhhhhhhcccceeehHHHHHHHhcCcch-----hheEEecc--cccceeEEEEcCCchHHHHHHHHcCCChhhHH
Confidence 999999999996 59999999999999887777 67666663 455679999998753 111
Q ss_pred -------------HHHHHHH-HHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 615 -------------EESFQWM-SRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 615 -------------~~l~~~l-~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+++.+.. +++|..+.+|..|.+....|.+ +.-=.|+.-|+.|+.++..|.
T Consensus 605 ~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTP-enGlvT~A~KLKRk~I~~~~k 668 (678)
T KOG1180|consen 605 ELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTP-ENGLVTAALKLKRKEILAAYK 668 (678)
T ss_pred HHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCC-CccccHHHHHhhHHHHHHHHH
Confidence 1122222 3357778899987322221211 112234566899999988775
|
|
| >PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-51 Score=514.04 Aligned_cols=399 Identities=26% Similarity=0.424 Sum_probs=312.0
Q ss_pred HHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHH
Q psy14338 87 IQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYG 166 (1761)
Q Consensus 87 ~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lA 166 (1761)
|+++|+++||++|+++ +. + +++||+||+++++++|..|+ +.|+++|++|+|+++|+ .++++++||
T Consensus 1 f~~~a~~~pd~~a~~~-~~-~---~~~Ty~~l~~~v~~la~~L~--------~~g~~~~~~V~i~~~n~--~~~~~~~~A 65 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-DE-G---RSLTYKQLYERVRKLAAALR--------KLGVKKGDRVAILLPNS--IEFVVAFLA 65 (417)
T ss_dssp HHHHHHHSTTSEEEEE-TT-T---EEEEHHHHHHHHHHHHHHHH--------HTTSSTTSEEEEEESSS--HHHHHHHHH
T ss_pred ChhHHhhCCCceEEEE-CC-C---EEEEHHHHHHHHHHHhhHHH--------HhCCCccccccccCCcc--ceeeeeecc
Confidence 7899999999999998 21 1 79999999999999999999 78899999999999999 999999999
Q ss_pred HHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEE----cccccccCccccc-----ccceecc--CCCcceeEEe
Q psy14338 167 CIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALT----SDACLKGLPKTAA-----GEVVAFK--GWPKLTWFVT 235 (1761)
Q Consensus 167 vlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~----~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~ 235 (1761)
|+++|++++|++|.++.+ ++.++++.++++++|+ +......+..... ..++.++ ..........
T Consensus 66 ~~~~G~~~v~l~~~~~~~-----~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (417)
T PF00501_consen 66 CLRAGAIPVPLDPSLSED-----ELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKS 140 (417)
T ss_dssp HHHTT-EEEEEETTSSHH-----HHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHH
T ss_pred cccccccccccccccccc-----cccccccccceeEEEEeccccccccccchhhhccccccccccccccccccccccccc
Confidence 999999999999999976 8999999999999998 1111111111000 0011111 1000000000
Q ss_pred ccccCCCCCCCCCCC-CCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH--HHcCCCCCCeEEEccCCcchhhhHH
Q psy14338 236 EHLAKTPKDWAPQPR-LTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT--QACHYTEGENMVCVLDFKRETGLWH 312 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~-~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~ 312 (1761)
....... ... ..++++++++|||||||.||+|+++|+++++.+.... ..++++ |++++++|++|.++++.
T Consensus 141 ~~~~~~~-----~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~ 213 (417)
T PF00501_consen 141 ASLSDEP-----QSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLIS 213 (417)
T ss_dssp HHHCHCS-----HSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHH
T ss_pred ccccccc-----ccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccc
Confidence 0000000 000 1579999999999999999999999999999988764 233334 69999999999999944
Q ss_pred HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCC----CCCCCceeEEEecCCCccC
Q psy14338 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK----DISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 313 ~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~----~~~l~~Lr~v~~gg~Ge~l 388 (1761)
.++.+|..|+++++++... ..++..+++.++++++|++.++| +++..+++..... ..++++||.+++| |+++
T Consensus 214 ~~~~~l~~G~~~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p-~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~--G~~l 289 (417)
T PF00501_consen 214 ALLAALFSGATLVLPSPFD-LFDPESLLELISRYKPTILFAVP-SMLEALLQSPEEKTKISKKDLSSLRTVISG--GEPL 289 (417)
T ss_dssp HHHHHHHCTSEEEEESSHH-HHHHHHHHHHHHHHTESEEEEEH-HHHHHHHHHHHTTHHGTTTTGTT-SEEEEE--SST-
T ss_pred ccccccccccccccccccc-ccccccchhcccccccccccccc-cccccccccccccccccccccccccccccc--cccC
Confidence 6999999999999999533 13467899999999999999996 5888877632221 3478899999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++++.++|.+.++.. .++|.||+||++.+++..+.. ....+..++|+
T Consensus 290 ~~~~~~~~~~~~~~~-----~i~~~YG~tE~~~~~~~~~~~----------------------------~~~~~~~~~G~ 336 (417)
T PF00501_consen 290 PPDLLRRLRKAFGNA-----PIINLYGSTETGSIATIRPPE----------------------------DDIEKPGSVGK 336 (417)
T ss_dssp CHHHHHHHHHHHTTS-----EEEEEEEEGGGSSEEEEEETT----------------------------THHSSTTSEBE
T ss_pred Chhhccccccccccc-----cceecccccccceeeeccccc----------------------------ccccccccccc
Confidence 999999999998541 499999999999877644210 00124568999
Q ss_pred CCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 469 VMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 469 p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
|++|++++|+|+++.. ++|.|+.|||+|+|+.++.||+++|+.|+++|. ++|||||||+|++|+||.
T Consensus 337 ~~~~~~~~ivd~~~~~-~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~------------~~~~~~TGD~g~~d~~G~ 403 (417)
T PF00501_consen 337 PLPGVEVKIVDPNTGE-PLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFI------------DDGWYRTGDLGRLDEDGY 403 (417)
T ss_dssp ESTTEEEEEECTTTSS-BESTTSEEEEEEESTTSBSEETTBHHHHHHHEE------------TTSEEEEEEEEEEETTSE
T ss_pred cccccccccccccccc-cccccccccccccCCccceeeeccccccccccc------------cccceecceEEEECCCCe
Confidence 9999999999998432 689999999999999999999999999999996 247999999999999999
Q ss_pred EEEEeccCCeEEEC
Q psy14338 549 VFVCGSRDGLMTVT 562 (1761)
Q Consensus 549 l~~~GR~d~qvki~ 562 (1761)
|+++||+||+||+|
T Consensus 404 ~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 404 LYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEEGSCEEEET
T ss_pred EEEEEeeCCEEEeC
Confidence 99999999999986
|
This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A .... |
| >KOG1179|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-49 Score=455.36 Aligned_cols=515 Identities=18% Similarity=0.203 Sum_probs=403.3
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..+++++|..+|+++|+++|+++.+.. +++||+|++++++++|+.|. ..|++.||.||++|+|+ ++
T Consensus 76 ~~ti~~~F~~~vrr~p~k~aii~~~~~----~~~Tf~e~~~~s~~~A~~~~--------~~~l~~GD~VAL~men~--pe 141 (649)
T KOG1179|consen 76 RRTIAELFLSQVRRQPDKPAIIYEGPF----QSLTFAELDARSNRVANYLH--------AEGLKAGDVVALLMENR--PE 141 (649)
T ss_pred CCcHHHHHHHHHHhCCCccEEEEeCCC----ceeeHHHHHHHHHHHHHHHH--------HhhcccCCEEEEecCCC--hh
Confidence 468999999999999999999998864 58999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----ccceeccCC----Ccce
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----GEVVAFKGW----PKLT 231 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~~~~----~~~~ 231 (1761)
++...||..|+|++...|+++...+ -|.|.+..++++.+|++++..+.+.+... ..+...... +...
T Consensus 142 fv~lWlGLaKlGv~tA~iNtNlR~~-----~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~ 216 (649)
T KOG1179|consen 142 FVALWLGLAKLGVITAFINTNLRGE-----PLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGI 216 (649)
T ss_pred HHHHHHhHHhhCceeeeeccccccc-----hhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchH
Confidence 9999999999999999999999877 59999999999999999987755544311 111111000 0000
Q ss_pred eEEeccccCCCCCC---CCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchh
Q psy14338 232 WFVTEHLAKTPKDW---APQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET 308 (1761)
Q Consensus 232 ~~~~~~~~~~~~~~---~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 308 (1761)
......+...+... ......+-.+++..||||||||.||..+++|.-+..........++++++|+++..+|++|.+
T Consensus 217 ~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsa 296 (649)
T KOG1179|consen 217 ESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSA 296 (649)
T ss_pred HHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHH
Confidence 00011111112111 112234567899999999999999999999999988888788889999999999999999999
Q ss_pred hhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 309 GLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 309 ~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
+.+.++..+|..|+|+|+-. +|+...+|+...+|++|+...+.. +..-|+..+..+...-..+|..+ |.-+
T Consensus 297 a~ilGi~~~l~~GaT~Vlrk----KFSAS~FW~DC~k~~~Tv~QYIGE-lcRYLl~~p~~~~er~HkVRla~----GNGL 367 (649)
T KOG1179|consen 297 AGILGIGGCLLHGATVVLRK----KFSASNFWDDCRKYNVTVIQYIGE-LCRYLLNQPPSPEERQHKVRLAY----GNGL 367 (649)
T ss_pred HHHHHHHHHHhcCceEEEec----ccchhhhHHHHHHhCCeeeehHHH-HHHHHHcCCCChhhcCceEEEEe----cCCC
Confidence 98889999999999999998 999999999999999999998853 77778887766555556788877 6668
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCc-cccccCcccceeeecCCCccCcccccccC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRG-VLSMSGLSYGVVRVDQENSLTSLTLQDCG 467 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 467 (1761)
-++++++|.+++ |+. ++.+.||+||+....+......+ ..|.. .+...-.....+++|.. -|
T Consensus 368 R~diW~~Fv~RF---g~~--~IgE~YgaTEgn~~~~N~d~~vG--A~G~~~~~~~~l~p~~LIk~D~~----------t~ 430 (649)
T KOG1179|consen 368 RPDIWQQFVKRF---GII--KIGEFYGATEGNSNLVNYDGRVG--ACGFMSRLLKLLYPFRLIKVDPE----------TG 430 (649)
T ss_pred CchHHHHHHHHc---CCC--eEEEEeccccCcceeeeecCccc--cccchhhhhhhccceEEEEecCC----------CC
Confidence 899999999999 655 79999999998754443322111 11110 00011111122333322 12
Q ss_pred CCCCCcEEEEEeCCCCcccCCCCCceEEE--EecCCc---cccccCCCccccccccccccccCCCccCCCceEeecceEE
Q psy14338 468 QVMPGCIMTVVKMDSPSYLCKTDEVGEIC--VASTGT---GSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGF 542 (1761)
Q Consensus 468 ~p~~~~~~~I~d~~~~~~~~p~G~~GEL~--i~G~~l---~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~ 542 (1761)
. -|.|++|...+|++|++|.|. |.-..- +.||.+.++.|+++.+.|-|..+ |-||.|||+-.
T Consensus 431 E-------~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkG------D~~f~tGDlLv 497 (649)
T KOG1179|consen 431 E-------PIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKG------DVYFNTGDLLV 497 (649)
T ss_pred c-------eeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccC------cEEEeeCcEEE
Confidence 2 235667776789999999775 223333 88999999999999998888654 89999999999
Q ss_pred EeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCC--ce-EEEEE-EeCCCCCHHHHH
Q psy14338 543 LGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRD--ER-ICVIA-EQRPDCSEEESF 618 (1761)
Q Consensus 543 ~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~--~~-l~a~v-~~~~~~~~~~l~ 618 (1761)
+|+.|+|||.+|.-|.+...|+||+-.|||..|.....+ +++.|+++..++- .. ..+++ .+....+.+.+-
T Consensus 498 ~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~-----~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~ 572 (649)
T KOG1179|consen 498 ADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFL-----QDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLY 572 (649)
T ss_pred EecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccc-----cceeEEEEecCCccCccceEEEEecCcccchHHHHH
Confidence 999999999999999999999999999999999998887 7999999984432 22 33333 334457889999
Q ss_pred HHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHH
Q psy14338 619 QWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664 (1761)
Q Consensus 619 ~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~ 664 (1761)
+++++.||+|..|..++ + ++++++|.+-|..+..|.+.-
T Consensus 573 ~~l~~~LP~YA~P~FlR-----l--~~~i~~TgTFKl~K~~L~~eg 611 (649)
T KOG1179|consen 573 QHLRENLPSYARPRFLR-----L--QDEIEKTGTFKLQKTELQKEG 611 (649)
T ss_pred HHHHhhCccccchHHHH-----H--HhhhhcccchhhHHHHHHHcc
Confidence 99999999999999873 3 499999999999999998753
|
|
| >PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-48 Score=493.11 Aligned_cols=399 Identities=26% Similarity=0.383 Sum_probs=310.3
Q ss_pred cCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1178 VAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1178 a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
|+++||++|+++ ..++++||+||+++++++|..|.+. |+++|++|+|+++|+++++++++||+++|++++||+|.
T Consensus 5 a~~~pd~~a~~~----~~~~~~Ty~~l~~~v~~la~~L~~~-g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~ 79 (417)
T PF00501_consen 5 AQRYPDRIALID----DEGRSLTYKQLYERVRKLAAALRKL-GVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPS 79 (417)
T ss_dssp HHHSTTSEEEEE----TTTEEEEHHHHHHHHHHHHHHHHHT-TSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETT
T ss_pred HhhCCCceEEEE----CCCEEEEHHHHHHHHHHHhhHHHHh-CCCccccccccCCccceeeeeecccccccccccccccc
Confidence 357899999993 2889999999999999999999988 99999999999999999999999999999999999997
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEe----chhHHHHHhhhccccccccccCCccccCCCCccc---hhhh-c---cCC-
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLS----NQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKK---KLAA-L---YRA- 1325 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~---~~~- 1325 (1761)
++.+ ++.++++.++++++|+ +......+......... ......++....... .... . ...
T Consensus 80 ~~~~------~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (417)
T PF00501_consen 80 LSED------ELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDP--SSSIIILDRDDLPKKEALKSASLSDEPQSPE 151 (417)
T ss_dssp SSHH------HHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTT--TEEEEEESHSSCTTCHHHHHHHHCHCSHSTT
T ss_pred cccc------cccccccccceeEEEEeccccccccccchhhhccccc--cccccccccccccccccccccccccccccCC
Confidence 7776 9999999999999997 22222222221110000 000000111110000 0000 0 000
Q ss_pred CCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHH--HHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeC
Q psy14338 1326 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK--LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 1403 (1761)
Q Consensus 1326 ~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~ 1403 (1761)
..++++++++|||||||.||+|+++|+++++.+..+. ..++++ |+++..+|++|..+++..++.++..|+++++++
T Consensus 152 ~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (417)
T PF00501_consen 152 DSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPS 229 (417)
T ss_dssp HTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEES
T ss_pred CCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccccccccccccc
Confidence 1579999999999999999999999999999988864 233333 588888899998888788999999999999999
Q ss_pred CCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhC
Q psy14338 1404 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 1483 (1761)
Q Consensus 1404 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~ 1483 (1761)
.... .+++.+++.|+++++|+++++|+++..+++..... ......++++||.+++||+++++ ++.+++.+.++.
T Consensus 230 ~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~---~~~~~~~l~~lr~v~~~G~~l~~-~~~~~~~~~~~~- 303 (417)
T PF00501_consen 230 PFDL-FDPESLLELISRYKPTILFAVPSMLEALLQSPEEK---TKISKKDLSSLRTVISGGEPLPP-DLLRRLRKAFGN- 303 (417)
T ss_dssp SHHH-HHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT---HHGTTTTGTT-SEEEEESST-CH-HHHHHHHHHHTT-
T ss_pred cccc-cccccchhccccccccccccccccccccccccccc---ccccccccccccccccccccCCh-hhcccccccccc-
Confidence 7443 44688999999999999999999999997631110 01123578899999999999999 888999988863
Q ss_pred CCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCC
Q psy14338 1484 GLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQC 1563 (1761)
Q Consensus 1484 g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~ 1563 (1761)
..+++.||+||++.+++.... . ....+..++|+|++|++++|+|+++++++
T Consensus 304 ----~~i~~~YG~tE~~~~~~~~~~-----------~--------------~~~~~~~~~G~~~~~~~~~ivd~~~~~~~ 354 (417)
T PF00501_consen 304 ----APIINLYGSTETGSIATIRPP-----------E--------------DDIEKPGSVGKPLPGVEVKIVDPNTGEPL 354 (417)
T ss_dssp ----SEEEEEEEEGGGSSEEEEEET-----------T--------------THHSSTTSEBEESTTEEEEEECTTTSSBE
T ss_pred ----ccceecccccccceeeecccc-----------c--------------ccccccccccccccccccccccccccccc
Confidence 479999999998876642210 0 00011235999999999999998889999
Q ss_pred CCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEE
Q psy14338 1564 GDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVF 1643 (1761)
Q Consensus 1564 p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~ 1643 (1761)
|.|+.|||+|+|++++.||++ +|+.|.++|. .+|||||||+|++ |+| |+ |+
T Consensus 355 ~~g~~Gei~i~~~~~~~gy~~---~~~~~~~~~~--------~~~~~~TGD~g~~------d~~--------G~----~~ 405 (417)
T PF00501_consen 355 PPGEPGEIVIRGPNVFSGYYN---DPELTAEAFI--------DDGWYRTGDLGRL------DED--------GY----LY 405 (417)
T ss_dssp STTSEEEEEEESTTSBSEETT---BHHHHHHHEE--------TTSEEEEEEEEEE------ETT--------SE----EE
T ss_pred cccccccccccCCccceeeec---cccccccccc--------cccceecceEEEE------CCC--------Ce----EE
Confidence 999999999999999999999 9999999993 3579999999999 999 99 99
Q ss_pred EEcccCCeEEeC
Q psy14338 1644 VVGALDETIMLR 1655 (1761)
Q Consensus 1644 ~~GR~dd~Iki~ 1655 (1761)
++||.||+||+|
T Consensus 406 ~~GR~~~~i~~~ 417 (417)
T PF00501_consen 406 ILGRSDDMIKVR 417 (417)
T ss_dssp EEEEGSCEEEET
T ss_pred EEEeeCCEEEeC
Confidence 999999999986
|
This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A .... |
| >TIGR01733 AA-adenyl-dom amino acid adenylation domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-47 Score=478.69 Aligned_cols=407 Identities=19% Similarity=0.249 Sum_probs=333.4
Q ss_pred eHHHHHHHHHHHHHHhhcCCCCcccc-CCCCCCCEEEEEccCCCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHH
Q psy14338 114 TYGKLLSRSLKVAYTLLTKPINRTSE-SSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIG 192 (1761)
Q Consensus 114 TY~eL~~~a~~lA~~L~~~~~~~~~~-~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~ 192 (1761)
||.||.++++++|+.|. + .|+++||+|+++++|+ ++++++++||+++|++++|+++.++.+ ++.
T Consensus 1 t~~~l~~~~~~~a~~l~--------~~~g~~~gd~v~l~~~n~--~~~~~~~~a~~~~G~~~v~~~~~~~~~-----~~~ 65 (408)
T TIGR01733 1 TYRELDERANRLARHLR--------AAGGVGPGDRVAVLLERS--AELVVAILAVLKAGAAYVPLDPAYPAE-----RLA 65 (408)
T ss_pred CHHHHHHHHHHHHHHHH--------HhhCCCCCCEEEEEeCCC--HHHHHHHHHHHHhCCEEEEcCCCCCHH-----HHH
Confidence 79999999999999999 6 7899999999999999 999999999999999999999999876 899
Q ss_pred HHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEE
Q psy14338 193 FLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGV 272 (1761)
Q Consensus 193 ~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV 272 (1761)
+++++++++++++++.....+........ ..... + ..................++++++++|||||||.||+|
T Consensus 66 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v 138 (408)
T TIGR01733 66 FILEDAGARLLLTDSALASRLAGLVLPII-LVDPL----E--LAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGV 138 (408)
T ss_pred HHHHhcCCCEEEEcCchhhhccccCCceE-Eechh----h--hhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCEE
Confidence 99999999999999876655433221111 10000 0 00000000000111114578999999999999999999
Q ss_pred EEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEE
Q psy14338 273 TVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAV 352 (1761)
Q Consensus 273 ~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~ 352 (1761)
+++|+++++........+++.++|+++...|++|+.+++. ++.++..|+++++++... ...+..+.+.++++++|.+.
T Consensus 139 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~t~l~ 216 (408)
T TIGR01733 139 VVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEE-IFGTLLAGATLVVPPEDE-ERDAALLAALIAEHPVTVLN 216 (408)
T ss_pred EeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHH-HHHHHhCCCEEEEcChhh-ccCHHHHHHHHHHcCceEEE
Confidence 9999999999999988999999999999999999999985 999999999999988532 22478999999999999999
Q ss_pred ecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCc
Q psy14338 353 VKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGV 432 (1761)
Q Consensus 353 ~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~ 432 (1761)
.+| .++..++.... ..+++||.+++| |+++++++.+.|.+.++. . .+++.||+||++.+++......
T Consensus 217 ~~p-~~~~~l~~~~~---~~~~~l~~v~~~--g~~~~~~~~~~~~~~~~~--~---~i~~~YG~tE~g~~~~~~~~~~-- 283 (408)
T TIGR01733 217 LTP-SLLALLAAALP---PALASLRLVILG--GEALTPALVDRWRARGPG--A---RLINLYGPTETTVWSTATLVDA-- 283 (408)
T ss_pred eCH-HHHHHHHHhhh---hcccCceEEEEe--CccCCHHHHHHHHHhCCC--c---EEEecccCCceEEEEEEEEcCc--
Confidence 996 47777776543 467899999999 999999999999998841 3 4999999999987665332110
Q ss_pred ccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCcc
Q psy14338 433 NATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGL 512 (1761)
Q Consensus 433 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~ 512 (1761)
...... +..++|+|+++++++|+|+++. +++.|+.|||+|+|+.++.||+++|+.
T Consensus 284 ----------------------~~~~~~-~~~~~G~~~~~~~~~i~~~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~ 338 (408)
T TIGR01733 284 ----------------------DDAPRE-SPVPIGRPLANTRLYVLDDDLR--PVPVGVVGELYIGGPGVARGYLNRPEL 338 (408)
T ss_pred ----------------------cccCCc-cccccCcccCCceEEEECCCCC--CCCCCCceEEEecCccccccccCChhh
Confidence 000001 2678999999999999999975 589999999999999999999999999
Q ss_pred ccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEE
Q psy14338 513 SNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAV 591 (1761)
Q Consensus 513 T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v 591 (1761)
|.+.|..+++... ++.+||+|||+|++++||.++|.||.||+||++|++|+|.|||+.+..++.| .+|+|
T Consensus 339 ~~~~~~~~~~~~~----~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v-----~~~~v 408 (408)
T TIGR01733 339 TAERFVPDPFAGG----DGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGV-----REAVV 408 (408)
T ss_pred hhcceeeCCCCCC----CCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcch-----hhhcC
Confidence 9999998887543 1235999999999999999999999999999999999999999999988777 56653
|
This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group. |
| >KOG1180|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-48 Score=440.38 Aligned_cols=486 Identities=14% Similarity=0.208 Sum_probs=361.3
Q ss_pred CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCE-EEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHH
Q psy14338 1194 SAAQLLTCSQLHKRAERVGALLLERAKINTGDH-VALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMI 1272 (1761)
Q Consensus 1194 ~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~-V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~i 1272 (1761)
++-.-+||.|+.+++.++|+.|.+. |+++++. ++|+++.+.+|+++++||++.+...|.+... +..+.+.+-
T Consensus 85 g~Y~w~sy~ev~~~~~~~gsGL~~l-G~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~T------LGeeal~hs 157 (678)
T KOG1180|consen 85 GDYKWMSYNEVYERVHNFGSGLVKL-GLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYAT------LGEEALIHS 157 (678)
T ss_pred cceeeecHHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehh------cChhhhhhh
Confidence 3456799999999999999999999 9997777 9999999999999999999999999999664 444599999
Q ss_pred HHhcCCeEEEechhHHHHHhhhccc-----cccccc----------------------cCCccccCCCCccchhhhccCC
Q psy14338 1273 VDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIK----------------------SWPTILDTDDMPKKKLAALYRA 1325 (1761)
Q Consensus 1273 l~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~ 1325 (1761)
|.+++++.++|+......+...... .++... ++.++..... . ...+..+
T Consensus 158 l~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~---~-~~~~~~~ 233 (678)
T KOG1180|consen 158 LNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGK---E-NEIPPHP 233 (678)
T ss_pred hccccceEEEeCHHHHHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCC---c-CCCCCCC
Confidence 9999999999999987765432110 111111 0011111000 0 0012334
Q ss_pred CCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc-CcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCC
Q psy14338 1326 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC-ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 1404 (1761)
Q Consensus 1326 ~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~ 1404 (1761)
+.|+|+|+|||||||||.|||||++|+|+++.+....... .+++.|+++..+|+.|.+-+.+ -+..++.|+++=..++
T Consensus 234 P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~a-E~~~ft~G~~iGY~S~ 312 (678)
T KOG1180|consen 234 PKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTA-ELVCFTWGGRIGYSSP 312 (678)
T ss_pred CCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHH-HHHHHhhCCEeecCCc
Confidence 5789999999999999999999999999999999887776 7889999999999999998855 5678899998877765
Q ss_pred CccccCHHHH----HHHHHhcCceEeecchHHHHHHHhhhcCCcchhh------------------c-c-----------
Q psy14338 1405 SEVEVNPALW----LSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLK------------------A-R----------- 1450 (1761)
Q Consensus 1405 ~~~~~~~~~l----~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~------------------~-~----------- 1450 (1761)
..+.-....+ -..+...++|++..||.+|.++-+.+.+++.... . .
T Consensus 313 ~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lV 392 (678)
T KOG1180|consen 313 LTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALV 392 (678)
T ss_pred ceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHH
Confidence 4321111111 2235668999999999999987554322111110 0 0
Q ss_pred -----CCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccC
Q psy14338 1451 -----NIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRND 1525 (1761)
Q Consensus 1451 -----~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1525 (1761)
...-..||++++||+||++ +..+-+.-.+- |.+..+||.||+++..+ ..++
T Consensus 393 FkKIr~~lGG~lR~~LsGGapLS~-dtQrF~nic~C------~Pv~qGYGLTEtca~~t-----------v~e~------ 448 (678)
T KOG1180|consen 393 FKKIRALLGGNLRYILSGGAPLSP-DTQRFMNICFC------CPVLQGYGLTETCAAAT-----------VLEP------ 448 (678)
T ss_pred HHHHHHHhCCceEEEEeCCCCCCH-HHHHHHHHhcc------ccccccccccchhcccE-----------ecCh------
Confidence 0112479999999999999 55322222321 47999999999754322 1221
Q ss_pred cceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCc--ceEEEEcCCcccccccCCCCChhhhHHHhhhhcccC
Q psy14338 1526 RVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSH--LGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTG 1603 (1761)
Q Consensus 1526 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~--~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~ 1603 (1761)
.....+.+|-|++.++++++|-+.+.--+.+- .|||+|+|+.+..||++ ||+.|++.|..
T Consensus 449 ----------~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~k---n~ekT~e~ft~----- 510 (678)
T KOG1180|consen 449 ----------EDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYK---NEEKTKEDFTV----- 510 (678)
T ss_pred ----------hhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhC---Chhhhhhhcee-----
Confidence 22234559999999999999965444333333 69999999999999999 99999999963
Q ss_pred CCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEE-eCCeecChHHHHHHHHHhccCcceeEEEe
Q psy14338 1604 NTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIM-LRGMRYHPIDIENSVMRAHKKIAECAVFT 1682 (1761)
Q Consensus 1604 ~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Ik-i~G~rI~~~eIE~~~l~~~p~V~~a~Vv~ 1682 (1761)
.+|.+||+|||+|++ .+| |. |.+++|++|.|| .+|+-|+++-||+ +++..|-|...+|.+
T Consensus 511 ~~G~~WF~TGDIGe~------~pd--------G~----LkIIDRKKdLVKlq~GEYIsL~KvEa-~l~s~p~V~NICvyA 571 (678)
T KOG1180|consen 511 EDGQRWFRTGDIGEF------HPD--------GC----LKIIDRKKDLVKLQNGEYISLGKVEA-ALRSSPYVDNICVYA 571 (678)
T ss_pred cCCcEEEecccccee------cCC--------Cc----EEEeechhhhhhhcccceeehHHHHH-HHhcCcchhheEEec
Confidence 146779999999999 788 99 999999999999 5899999999999 899999999999998
Q ss_pred eCC--eEEEEEEeCCCchh---------H-----------------hhHHHHHHHHHhhhcCceeeEEEEECCCCccC--
Q psy14338 1683 WTN--LLVVVVELDGNESE---------A-----------------LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPI-- 1732 (1761)
Q Consensus 1683 ~~~--~~~a~v~~~~~~~~---------~-----------------~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~-- 1732 (1761)
... .++++|++.....+ . .+|.+.-+.+.|. ...+|..|++.+ .|-
T Consensus 572 d~~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~-~iEip~~I~l~~---e~WTP 647 (678)
T KOG1180|consen 572 DSNKSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLE-RIEIPAKIVLSP---EPWTP 647 (678)
T ss_pred ccccceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccc-cccccceeEecC---CCcCC
Confidence 554 78999987532111 0 2233333333466 889999999887 454
Q ss_pred -----CCchhhhHHHHHHHHHcCCCChhhh
Q psy14338 1733 -----NSRGEKQRMHLRDGFLADQLDPIYV 1757 (1761)
Q Consensus 1733 -----t~~GKvdR~~L~~~~~~~~~~~~~~ 1757 (1761)
|+.-|+.|+.++..| ..+++.+|.
T Consensus 648 enGlvT~A~KLKRk~I~~~~-k~ei~~~Y~ 676 (678)
T KOG1180|consen 648 ENGLVTAALKLKRKEILAAY-KKEIDRLYK 676 (678)
T ss_pred CccccHHHHHhhHHHHHHHH-HHHHHHHhc
Confidence 445699999999998 667777774
|
|
| >TIGR01733 AA-adenyl-dom amino acid adenylation domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-46 Score=468.87 Aligned_cols=407 Identities=19% Similarity=0.264 Sum_probs=332.8
Q ss_pred CHHHHHHHHHHHHHHHHh-hcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCC
Q psy14338 1200 TCSQLHKRAERVGALLLE-RAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKS 1278 (1761)
Q Consensus 1200 TY~eL~~~a~~lA~~L~~-~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~ 1278 (1761)
||.||.+.++++|+.|.+ . |+++||+|+++++|+++++++++||+++|++++|+++.++.+ ++.++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~-g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~------~~~~~l~~~~~ 73 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAG-GVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAE------RLAFILEDAGA 73 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhh-CCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHH------HHHHHHHhcCC
Confidence 899999999999999998 6 999999999999999999999999999999999999987777 99999999999
Q ss_pred eEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHH
Q psy14338 1279 VLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLC 1358 (1761)
Q Consensus 1279 ~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~ 1358 (1761)
++++++......+.............+....... .. .........++++++++|||||||.||+|.++|+++.+.+
T Consensus 74 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~ 149 (408)
T TIGR01733 74 RLLLTDSALASRLAGLVLPIILVDPLELAALDDA--PA--PPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLL 149 (408)
T ss_pred CEEEEcCchhhhccccCCceEEechhhhhhcccc--cc--cccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHH
Confidence 9999998765554332211100000000000000 00 0000111457899999999999999999999999999999
Q ss_pred HHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHh
Q psy14338 1359 RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTK 1438 (1761)
Q Consensus 1359 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~ 1438 (1761)
......+++.++|+++...+++|..++ ..++.++..|+++++.+.... ..+..+.+.++++++|.+.++|++++.+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~ 227 (408)
T TIGR01733 150 AWLARRYGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEE-RDAALLAALIAEHPVTVLNLTPSLLALLAA 227 (408)
T ss_pred HHHHHhcCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhc-cCHHHHHHHHHHcCceEEEeCHHHHHHHHH
Confidence 999999999999999998888888776 678999999999999886432 247899999999999999999999999977
Q ss_pred hhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEec
Q psy14338 1439 GLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVD 1518 (1761)
Q Consensus 1439 ~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 1518 (1761)
.. ...+++||.+++||+++++ .+.+.|.+.++ ...+++.||+||++.++........
T Consensus 228 ~~----------~~~~~~l~~v~~~g~~~~~-~~~~~~~~~~~-----~~~i~~~YG~tE~g~~~~~~~~~~~------- 284 (408)
T TIGR01733 228 AL----------PPALASLRLVILGGEALTP-ALVDRWRARGP-----GARLINLYGPTETTVWSTATLVDAD------- 284 (408)
T ss_pred hh----------hhcccCceEEEEeCccCCH-HHHHHHHHhCC-----CcEEEecccCCceEEEEEEEEcCcc-------
Confidence 32 1567899999999999999 78788877664 2579999999998765531110000
Q ss_pred ccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhh
Q psy14338 1519 LRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSA 1598 (1761)
Q Consensus 1519 ~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~ 1598 (1761)
..... +..++|+|+++++++|+|++ +++++.|+.|||+|+|+.++.||++ +|+.|.+.|..
T Consensus 285 --------------~~~~~-~~~~~G~~~~~~~~~i~~~~-~~~~~~g~~Gel~v~~~~~~~gy~~---~~~~~~~~~~~ 345 (408)
T TIGR01733 285 --------------DAPRE-SPVPIGRPLANTRLYVLDDD-LRPVPVGVVGELYIGGPGVARGYLN---RPELTAERFVP 345 (408)
T ss_pred --------------ccCCc-cccccCcccCCceEEEECCC-CCCCCCCCceEEEecCccccccccC---Chhhhhcceee
Confidence 00000 13569999999999999987 8999999999999999999999999 99999999988
Q ss_pred hcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCccee
Q psy14338 1599 RLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAEC 1678 (1761)
Q Consensus 1599 ~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a 1678 (1761)
+++...++.+||+|||+|++ |+| |+ ++|.||.||+|+++|++|+|.|||+ ++..||.|.+|
T Consensus 346 ~~~~~~~~~~~~~TGDl~~~------d~~--------g~----~~~~gR~~~~i~~~G~~v~~~~ie~-~l~~~~~v~~~ 406 (408)
T TIGR01733 346 DPFAGGDGARLYRTGDLVRY------LPD--------GN----LEFLGRIDDQVKIRGYRIELGEIEA-ALLRHPGVREA 406 (408)
T ss_pred CCCCCCCCceEEECCceEEE------cCC--------CC----EEEeeccCCEEEeCeEEechHHHHH-HHhcCcchhhh
Confidence 77755444569999999999 999 99 9999999999999999999999999 88899999998
Q ss_pred EE
Q psy14338 1679 AV 1680 (1761)
Q Consensus 1679 ~V 1680 (1761)
+|
T Consensus 407 ~v 408 (408)
T TIGR01733 407 VV 408 (408)
T ss_pred cC
Confidence 75
|
This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group. |
| >COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=491.59 Aligned_cols=417 Identities=19% Similarity=0.230 Sum_probs=338.0
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++|..|..++. ++|++.|+. .++.++||+||+.+++++|+.|.+. |+++++.|+++++++.++++++
T Consensus 226 ~~~i~~~f~~~a~-----~~p~~~a~~-----~~~~~lty~el~~~a~~la~~l~~~-g~~~~~~V~i~~~rs~~~i~~~ 294 (642)
T COG1020 226 RLTIHLLFEEQAA-----TTPDAVALV-----RGGQQLTYAELDARANRLARLLISL-GVGPGETVAILADRSLELVVAL 294 (642)
T ss_pred cchHHHHHHHHHH-----hCCCceeEe-----cCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCeEEEEcCCCHHHHHHH
Confidence 3678999999887 779999999 6789999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhh
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAA 1321 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1321 (1761)
+|++|+|++|+|+||.+|.+ |+.+++++++++++++............. +.. ...... .+. ...
T Consensus 295 l~ilkaG~~yvP~d~~~P~~------r~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~--~~~--~~~ 358 (642)
T COG1020 295 LAVLKAGAAYVPLDPLYPAE------RLAYILEDSRPTLLLTQAHLRVDDVGLPG---LAL---DDALSE--IPD--TDP 358 (642)
T ss_pred HHHHhcCCeEecCCCCChHH------HHHHHHhhcCccEEEeccccccccccCCc---ccc---cccccc--CCc--cCc
Confidence 99999999999999999999 99999999999999998433221111000 000 000000 000 000
Q ss_pred ccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEE
Q psy14338 1322 LYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 1401 (1761)
Q Consensus 1322 ~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl 1401 (1761)
......+++++|++|||||||+||||+++|+++.+.+.+....++++..|+++...++.|+.+. +++|.++.+|+++++
T Consensus 359 ~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~l~~ 437 (642)
T COG1020 359 IPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASV-FEIFGALLEGARLVL 437 (642)
T ss_pred ccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhH-HHHHHHHhCCCEEEe
Confidence 0123456899999999999999999999999999999999999999999988888888777665 899999999999999
Q ss_pred eCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHh
Q psy14338 1402 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFS 1481 (1761)
Q Consensus 1402 ~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~ 1481 (1761)
.+... ..++..+.+.+.++++|++..+|+++..++... .........+.+|.+++|||+++. .+.+++.....
T Consensus 438 ~~~~~-~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~-----~~~~~~~~~~~lr~~~~gGe~l~~-~~~~~~~~~~~ 510 (642)
T COG1020 438 APALL-QVDPAALLELLEAQGITVLLLVPLLLRLLLLAA-----LAPDLISPCERLRQLLSGGEALPL-ALVQRLLQLAA 510 (642)
T ss_pred cCccc-cCCHHHHHHHHHHcCCEEEEecHHHHHHHHhch-----hhccccCCcccccEEEEcCCCCCH-HHHHHHHHhcc
Confidence 98744 689999999999999999999999999997620 011112223359999999999999 67666655432
Q ss_pred hCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCC
Q psy14338 1482 ALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKG 1561 (1761)
Q Consensus 1482 ~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~ 1561 (1761)
. ...+.|.||+||+...+........ ... ..+||+|++|++++|+| +.++
T Consensus 511 ~----~~~l~~~ygpTe~~~~~~~~~~~~~----------------------~~~---~~piG~p~~n~~~~ild-~~~~ 560 (642)
T COG1020 511 L----ARRLLNLYGPTEATLDAPSFPISAE----------------------LES---RVPIGRPVANTQLYILD-QGLR 560 (642)
T ss_pred c----cceEeeccCccHHhhheeeEEcccc----------------------cCC---CCCcceeeCCCeEEEEC-CCCC
Confidence 1 2678999999995443221111000 000 35699999999999999 5589
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
++|.|+.|||||.|.++++||+| +|++|+++|+.+ ++|+|||++|+ .+| |.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~---~p~lt~~~f~~~--------~~y~tgD~~r~------~~d--------g~---- 611 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLN---RPDLTAERFIAL--------RLYRTGDLARP------LAD--------GA---- 611 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcC---ChhhhHHHhhhc--------cCccCCCeeeE------CCC--------Ce----
Confidence 99999999999999999999999 999999999753 59999999999 899 99
Q ss_pred EEEEcccCCeEEeCCeecChHHHHHHHHHhcc
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIENSVMRAHK 1673 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p 1673 (1761)
++|+||.|+|||++|+|||++|||. .+.++|
T Consensus 612 ~e~lgr~D~qvki~g~Riel~eie~-~l~~~~ 642 (642)
T COG1020 612 LEYLGRKDSQVKIRGFRIELGEIEA-ALAEQP 642 (642)
T ss_pred EEEeccccceeEeceEecCcHHHHH-HHhcCC
Confidence 9999999999999999999999999 787765
|
|
| >KOG1179|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-45 Score=418.39 Aligned_cols=502 Identities=15% Similarity=0.149 Sum_probs=388.7
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
...++.++.|.++++ ++|+++|+++++. ++++||+|++++++++|+.|... |++.||.|+++|+|++|++.
T Consensus 74 r~~~ti~~~F~~~vr-----r~p~k~aii~~~~---~~~~Tf~e~~~~s~~~A~~~~~~-~l~~GD~VAL~men~pefv~ 144 (649)
T KOG1179|consen 74 RERRTIAELFLSQVR-----RQPDKPAIIYEGP---FQSLTFAELDARSNRVANYLHAE-GLKAGDVVALLMENRPEFVA 144 (649)
T ss_pred ccCCcHHHHHHHHHH-----hCCCccEEEEeCC---CceeeHHHHHHHHHHHHHHHHHh-hcccCCEEEEecCCChhHHH
Confidence 345788999999986 7899999996443 58999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccc---cccccCC---------c
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNV---VDIKSWP---------T 1307 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~---~~~~~~~---------~ 1307 (1761)
.+||..|+|++..-|++ .+..+-+.+-+..++++.+|++++..+.+.+...... +..-.+. +
T Consensus 145 lWlGLaKlGv~tA~iNt------NlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~ 218 (649)
T KOG1179|consen 145 LWLGLAKLGVITAFINT------NLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIES 218 (649)
T ss_pred HHHhHHhhCceeeeecc------ccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHH
Confidence 99999999999999955 4555599999999999999999998876665522111 1100000 0
Q ss_pred cccC-CCCccchhh-hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhH
Q psy14338 1308 ILDT-DDMPKKKLA-ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGF 1385 (1761)
Q Consensus 1308 ~~~~-~~~~~~~~~-~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1385 (1761)
+... +..+..+.+ ......+-.+++..||||||||.||..+++|.-....+......++++++|+++..+|++|..+.
T Consensus 219 L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ 298 (649)
T KOG1179|consen 219 LLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAG 298 (649)
T ss_pred HHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHH
Confidence 0000 000111101 11223455688999999999999999999999999988888889999999999999999999999
Q ss_pred HHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecC
Q psy14338 1386 ALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAE 1465 (1761)
Q Consensus 1386 ~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe 1465 (1761)
+..+-.+|..|+|+|+-.+ |++..+|+...+|++|+..-.--+.+.|++.. ......-..+|..+ |-
T Consensus 299 ilGi~~~l~~GaT~VlrkK----FSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p-------~~~~er~HkVRla~--GN 365 (649)
T KOG1179|consen 299 ILGIGGCLLHGATVVLRKK----FSASNFWDDCRKYNVTVIQYIGELCRYLLNQP-------PSPEERQHKVRLAY--GN 365 (649)
T ss_pred HHHHHHHHhcCceEEEecc----cchhhhHHHHHHhCCeeeehHHHHHHHHHcCC-------CChhhcCceEEEEe--cC
Confidence 9999999999999999885 89999999999999999999999999997742 22333445677655 34
Q ss_pred CCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccc
Q psy14338 1466 ERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGK 1545 (1761)
Q Consensus 1466 ~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 1545 (1761)
.+.+ ++++.|.+.|+. ..|.+.||.||...-. .++...-..+-+... +.+
T Consensus 366 GLR~-diW~~Fv~RFg~-----~~IgE~YgaTEgn~~~-~N~d~~vGA~G~~~~-----------------------~~~ 415 (649)
T KOG1179|consen 366 GLRP-DIWQQFVKRFGI-----IKIGEFYGATEGNSNL-VNYDGRVGACGFMSR-----------------------LLK 415 (649)
T ss_pred CCCc-hHHHHHHHHcCC-----CeEEEEeccccCccee-eeecCccccccchhh-----------------------hhh
Confidence 4666 788888888753 6799999999965432 222211111100000 111
Q ss_pred ccCCcEEEEEcCCCC----------CCCCCCcceEEEE--cCCcc---cccccCCCCChhhhHHHhhhhcccCCCCCceE
Q psy14338 1546 LLPGVKVIIANPETK----------GQCGDSHLGEIWV--QSPHN---ASGYFSLYGDESEYAQQFSARLVTGNTGELYA 1610 (1761)
Q Consensus 1546 p~~~~~~~v~d~~~~----------~~~p~G~~GEL~i--~g~~v---~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~y 1610 (1761)
-+--+++.=+|++++ .+|++|++|.|.- .-..- +.||.+ ..+.|+++.+.|-|. .|+-||
T Consensus 416 ~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g---~~~~t~kKl~rDVFk--kGD~~f 490 (649)
T KOG1179|consen 416 LLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAG---PKKATEKKLLRDVFK--KGDVYF 490 (649)
T ss_pred hccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccC---chhhhhhhhHHhhhc--cCcEEE
Confidence 111122222333333 3689999997643 23333 899998 899999999999886 488999
Q ss_pred eeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee------C
Q psy14338 1611 RTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW------T 1684 (1761)
Q Consensus 1611 rTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~------~ 1684 (1761)
.|||+-.+ |+. |+ |+|.+|..|...-.|+||+..|||. +|....++.||.|+|. |
T Consensus 491 ~tGDlLv~------D~~--------Gy----lYF~DRtGDTFRWKGENVsTtEVe~-~l~~~~~~~dv~VYGV~VP~~EG 551 (649)
T KOG1179|consen 491 NTGDLLVA------DEL--------GY----LYFKDRTGDTFRWKGENVSTTEVED-VLSALDFLQDVNVYGVTVPGYEG 551 (649)
T ss_pred eeCcEEEE------ecC--------Cc----EEEeccCCCceeecCCcccHHHHHH-HHhhhccccceeEEEEecCCccC
Confidence 99999999 999 99 9999999999999999999999999 9999999999999984 2
Q ss_pred CeEEEEEE-eCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHH
Q psy14338 1685 NLLVVVVE-LDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1685 ~~~~a~v~-~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~ 1747 (1761)
..=.|.|+ .+..+.+.+.+-+++++. || .|..|..+.+.+ +|++|.+=|..|..|.+.-
T Consensus 552 RaGMAaI~~~p~~~~d~~~l~~~l~~~-LP-~YA~P~FlRl~~--~i~~TgTFKl~K~~L~~eg 611 (649)
T KOG1179|consen 552 RAGMAAIVLDPTTEKDLEKLYQHLREN-LP-SYARPRFLRLQD--EIEKTGTFKLQKTELQKEG 611 (649)
T ss_pred ccceEEEEecCcccchHHHHHHHHHhh-Cc-cccchHHHHHHh--hhhcccchhhHHHHHHHcc
Confidence 23334444 455677888999999997 99 999999999999 9999999999999998754
|
|
| >PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=433.72 Aligned_cols=321 Identities=18% Similarity=0.206 Sum_probs=268.0
Q ss_pred CCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCc
Q psy14338 251 LTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYA 330 (1761)
Q Consensus 251 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~ 330 (1761)
..++|++||+|||||||.||||+++|+++.+.+......+ ...++++..+|++|..++.. ++.+++.|+++++....
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~v~~~~~ 108 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQV-LVRSVIAGSEPVELDVS 108 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHH-HHHHHHcCCeEEecCcC
Confidence 4578999999999999999999999999998887665544 35678999999999999885 89999999999884321
Q ss_pred cccCCHHHHHHHHHhcC--ceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCC
Q psy14338 331 LMKVNPASWMQMITKYR--ASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPD 408 (1761)
Q Consensus 331 ~~~~~~~~l~~~i~~~~--vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~ 408 (1761)
. .+++..+++.+++++ +++..++| ..+..++..... ..+++++|.+++| |+++++++.+++.+. |++
T Consensus 109 ~-~~~~~~~~~~i~~~~~~~~~~~~~p-~~l~~~~~~~~~-~~~~~~l~~i~~g--G~~l~~~~~~~~~~~----~~~-- 177 (358)
T PRK07824 109 A-GFDPTALPRAVAELGGGRRYTSLVP-MQLAKALDDPAA-TAALAELDAVLVG--GGPAPAPVLDAAAAA----GIN-- 177 (358)
T ss_pred C-CcCHHHHHHHHHHhCCCceEEEecH-HHHHHHHhCccc-cCCcccceEEEEC--CCCCCHHHHHHHHhc----CCc--
Confidence 1 678999999999998 55666665 455555554332 3457899999999 999999999988753 544
Q ss_pred ccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCC
Q psy14338 409 AICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCK 488 (1761)
Q Consensus 409 ~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p 488 (1761)
++|.||+||++..+ ...|+|++|++++|.|
T Consensus 178 -v~~~YG~TE~~~~~----------------------------------------~~~G~~~~g~~v~i~~--------- 207 (358)
T PRK07824 178 -VVRTYGMSETSGGC----------------------------------------VYDGVPLDGVRVRVED--------- 207 (358)
T ss_pred -EEecccCCccCCCc----------------------------------------CcCceeCCCCEEEecC---------
Confidence 99999999986422 1358999999999832
Q ss_pred CCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccCh
Q psy14338 489 TDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNA 568 (1761)
Q Consensus 489 ~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~ 568 (1761)
|||+++|+.++.||+|+++.+ .|. .++||+|||+|++ +||.++|+||+||+||++|++|+|
T Consensus 208 ----Gei~v~g~~~~~gY~~~~~~~--~~~------------~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p 268 (358)
T PRK07824 208 ----GRIALGGPTLAKGYRNPVDPD--PFA------------EPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLP 268 (358)
T ss_pred ----CEEEEecCccccccCCCcccc--ccc------------CCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECH
Confidence 999999999999999998743 231 2579999999999 899999999999999999999999
Q ss_pred HHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCC--CCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCC
Q psy14338 569 DDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRP--DCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPN 645 (1761)
Q Consensus 569 ~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~--~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~ 645 (1761)
.|||+.|.+++.| .+|+|++.++ ..++.++++++... ....+++++++++.|+.||+|..+ +.++
T Consensus 269 ~eIE~~l~~~~~V-----~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i-------~~v~ 336 (358)
T PRK07824 269 QVVEAALATHPAV-----ADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEALRAHVARTLDRTAAPREL-------HVVD 336 (358)
T ss_pred HHHHHHHHhCCCc-----ceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHHHHHHHhhCccccCCCEE-------EEec
Confidence 9999999999888 7999999885 45788888887654 367889999999999999999986 4559
Q ss_pred CccCCCCCcccHHHHHHHHHc
Q psy14338 646 YLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 646 ~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+||+|++||+||++|++.+.+
T Consensus 337 ~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 337 ELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred CCCCCCCccccHHHHHHHhhc
Confidence 999999999999999998753
|
|
| >PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=415.39 Aligned_cols=319 Identities=24% Similarity=0.272 Sum_probs=261.5
Q ss_pred CCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCC
Q psy14338 1325 APTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 1404 (1761)
Q Consensus 1325 ~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~ 1404 (1761)
...+++++|++|||||||.||||+++|+++.+.+......++ ..++.+..+|++|..++ ..++.+++.|+++++...
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRLG--GPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhccC--CCCeEEEECChHHHHHH-HHHHHHHHcCCeEEecCc
Confidence 345789999999999999999999999999998877665543 44677888888888776 557889999999988432
Q ss_pred CccccCHHHHHHHHHhcC--ceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhh
Q psy14338 1405 SEVEVNPALWLSAVSQYR--VRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSA 1482 (1761)
Q Consensus 1405 ~~~~~~~~~l~~~i~~~~--vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~ 1482 (1761)
.. .+++..+++.+++++ +++..++|+.+..++.. .....+++++|.+++||+++++ .+.+++.+.
T Consensus 108 ~~-~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~--------~~~~~~~~~l~~i~~gG~~l~~-~~~~~~~~~--- 174 (358)
T PRK07824 108 SA-GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDD--------PAATAALAELDAVLVGGGPAPA-PVLDAAAAA--- 174 (358)
T ss_pred CC-CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhC--------ccccCCcccceEEEECCCCCCH-HHHHHHHhc---
Confidence 11 478999999999998 56677788887776542 1123467899999999999999 676666542
Q ss_pred CCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCC
Q psy14338 1483 LGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQ 1562 (1761)
Q Consensus 1483 ~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~ 1562 (1761)
| ..+++.||+||++..+ ...|+|++|++++|.|
T Consensus 175 -~---~~v~~~YG~TE~~~~~-------------------------------------~~~G~~~~g~~v~i~~------ 207 (358)
T PRK07824 175 -G---INVVRTYGMSETSGGC-------------------------------------VYDGVPLDGVRVRVED------ 207 (358)
T ss_pred -C---CcEEecccCCccCCCc-------------------------------------CcCceeCCCCEEEecC------
Confidence 3 5799999999964321 1168999999999943
Q ss_pred CCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceE
Q psy14338 1563 CGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAV 1642 (1761)
Q Consensus 1563 ~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l 1642 (1761)
|||+++|+.++.||+| +++.+ .| ..++||+|||+|++ +| |+ +
T Consensus 208 ------Gei~v~g~~~~~gY~~---~~~~~--~~--------~~~g~~~TGDl~~~-------~~--------g~----l 249 (358)
T PRK07824 208 ------GRIALGGPTLAKGYRN---PVDPD--PF--------AEPGWFRTDDLGAL-------DD--------GV----L 249 (358)
T ss_pred ------CEEEEecCccccccCC---Ccccc--cc--------cCCCceecccEEEE-------eC--------CE----E
Confidence 9999999999999998 77643 23 24579999999999 36 88 9
Q ss_pred EEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-CchhHhhHHHHHHHHHhhhcC
Q psy14338 1643 FVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESEALDLVPLVTNAVLEEHH 1716 (1761)
Q Consensus 1643 ~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~~~~l~~~l~~~~Lp~~~ 1716 (1761)
+|+||+||+||++|+||+|.|||+ ++.+||+|.+|+|++. ++.++++++... .....++++++++++ |+ .|
T Consensus 250 ~i~GR~~d~i~~~G~~v~p~eIE~-~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i~~~~~~~-l~-~~ 326 (358)
T PRK07824 250 TVLGRADDAISTGGLTVLPQVVEA-ALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEALRAHVART-LD-RT 326 (358)
T ss_pred EEEeccCCeEEECCEEECHHHHHH-HHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHHHHHHHhh-Cc-cc
Confidence 999999999999999999999999 8999999999999974 457778776543 356778999999987 88 89
Q ss_pred ceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1717 LIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1717 ~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
++|..|++++ +||+|++||+||++|++.+.+
T Consensus 327 ~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 327 AAPRELHVVD--ELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred cCCCEEEEec--CCCCCCCccccHHHHHHHhhc
Confidence 9999999999 999999999999999998843
|
|
| >PTZ00297 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=446.33 Aligned_cols=470 Identities=16% Similarity=0.145 Sum_probs=329.7
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|.+.++++|+++|+......|.+ +.+||+|+.+++.++|..|+ +.|+++||+|+|+++|+ ++|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~-~~lTY~El~~~V~~lAa~L~--------~lGV~~GDrVaIls~N~--~Ew 495 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGES-EWLTYGTVDARARELGSGLL--------ALGVRPGDVIGVDCEAS--RNI 495 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCc-eEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHH
Confidence 58999999999999999999643111211 57999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc---cccceeccCC---C------
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA---AGEVVAFKGW---P------ 228 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~~---~------ 228 (1761)
+++.+||+++|+++||+++. .+ .+.++++++++++||++......+.... ...++.++.. .
T Consensus 496 via~lA~~~~GaV~VPly~t--~~-----eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~ 568 (1452)
T PTZ00297 496 VILEVACALYGFTTLPLVGK--GS-----TMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVAR 568 (1452)
T ss_pred HHHHHHHHHcCCEEEeCCCC--HH-----HHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccc
Confidence 99999999999999999753 22 6999999999999999876554433221 1122222210 0
Q ss_pred --cceeEE-eccccCCCC-CCCCCCCCCCCCcEEEEe---cCCCCCCceEEEEchHHHHHHHHHHHHHc---CCCCCCeE
Q psy14338 229 --KLTWFV-TEHLAKTPK-DWAPQPRLTDDTPAYIEY---TTDRDGSVMGVTVTRAAMLSHCRALTQAC---HYTEGENM 298 (1761)
Q Consensus 229 --~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~a~ii~---TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d~~ 298 (1761)
...... .+....... .........++|++.|+| ||||||.||||++||+|++..+....... ...++|++
T Consensus 569 ~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~ 648 (1452)
T PTZ00297 569 DLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLM 648 (1452)
T ss_pred cCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEE
Confidence 000010 111111110 111123347899999996 99999999999999999999988765432 45678999
Q ss_pred EEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC----CC-------
Q psy14338 299 VCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT----KD------- 367 (1761)
Q Consensus 299 l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~----~~------- 367 (1761)
+.++|++|.++... .+.+++.|++++. +++..+++.|+++++|+++.+|+ ++..+... ..
T Consensus 649 Ls~LPLaHI~er~~-~~~~l~~G~~I~~-------~d~~~lledL~~~rPTv~~~VPr-v~ekI~~~i~~~~~~~~~~~~ 719 (1452)
T PTZ00297 649 VHFTPFAMLFNRVF-VLGLFAHGSAVAT-------VDAAHLQRAFVKFQPTILVAAPS-LFSTSRLQLSRANERYSAVYS 719 (1452)
T ss_pred EEechHHHHHHHHH-HHHHHHcCCEEEe-------CCHHHHHHHHHHHCCEEEEecHH-HHHHHHHHHHHHhhhhhHHHH
Confidence 99999999999764 7888999999863 35889999999999999999975 55433211 00
Q ss_pred ---------------CCCC----------------CCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcccccccc
Q psy14338 368 ---------------HKDI----------------SLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASS 416 (1761)
Q Consensus 368 ---------------~~~~----------------~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~ 416 (1761)
.... --..+|.+++||++++++..+.. +++ ++.+||.
T Consensus 720 ~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~---------~i~---i~~g~gl 787 (1452)
T PTZ00297 720 WLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE---------HIS---VCYVPCL 787 (1452)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC---------Cce---EEEecce
Confidence 0000 01468999998555676643322 343 7789999
Q ss_pred ccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEE
Q psy14338 417 SECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEIC 496 (1761)
Q Consensus 417 TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~ 496 (1761)
||+. +...+.. ....|+|+||++++|.|.+.... . +..|||+
T Consensus 788 TE~~--~~~~~~~---------------------------------~~~~G~PlpgvEvKI~~~~E~~~--~-~~~GEIl 829 (1452)
T PTZ00297 788 REVF--FLPSEGV---------------------------------FCVDGTPAPSLQVDLEPFDEPSD--G-AGIGQLV 829 (1452)
T ss_pred EEee--eecCCCC---------------------------------cccCCeecCceEEEEcccccccC--C-CCCCeEE
Confidence 9953 2222210 11249999999999987422111 1 2359999
Q ss_pred EecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEEC-CcccChHHHHHHH
Q psy14338 497 VASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVT-GRKHNADDIIATV 575 (1761)
Q Consensus 497 i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~-G~rIe~~eIE~~l 575 (1761)
++ |+++|+.|++.+ ++|+ +||+|.|+||+||+||.. |++|+|+.||+.+
T Consensus 830 vr-------~~kdpe~T~e~~--------------~gW~---------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l 879 (1452)
T PTZ00297 830 LA-------KKGEPRRTLPIA--------------AQWK---------RDRTLRLLGPPLGILLPVAYEYVIAAELERIF 879 (1452)
T ss_pred EE-------ECCChHHHHHhh--------------CcCc---------cCCeEEEEeccccceECCCCcEEcHHHHHHHH
Confidence 95 458999999744 5664 699999999999999975 9999999999998
Q ss_pred HhcCCccccccceEEEEEEecCCCceEEEEEEeCCCC---------------------CHHHHHH----HHHHH------
Q psy14338 576 LAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC---------------------SEEESFQ----WMSRV------ 624 (1761)
Q Consensus 576 ~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~---------------------~~~~l~~----~l~~~------ 624 (1761)
..++-| .+++|++. ..+.++|+|+++.+. +.+++.+ .+.+.
T Consensus 880 ~~sp~I-----~qi~V~Gd---~~k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~ 951 (1452)
T PTZ00297 880 SQSRYV-----NDIFLYAD---PSRPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAK 951 (1452)
T ss_pred hcCCCc-----cEEEEEec---CCCceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHH
Confidence 877666 78888885 344599999876320 1222211 11111
Q ss_pred ---HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 625 ---LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 625 ---Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+..+++++.+.+..-.| .++.=-+|++.|+.|+.+.+.|.+
T Consensus 952 ~n~l~~~ei~k~~~Ll~~~F-t~enGlLTPTlKlKR~~I~~kY~~ 995 (1452)
T PTZ00297 952 ENGLHPSNVPEYVHLHPHAF-KDHSTFLTPYGKIRRDAVHSYFSS 995 (1452)
T ss_pred HhCcCccceeeEEEEeCCCC-CCCCCcCChhhhhhHHHHHHHHHH
Confidence 34455665542111111 123346899999999999988754
|
|
| >PTZ00297 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=427.40 Aligned_cols=472 Identities=13% Similarity=0.137 Sum_probs=331.4
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++.+.|.+.+. ++|+++|+.........+.+||+|+.++++++|+.|.+. |+++||+|+|+++|+++|+++.+
T Consensus 427 ~Tl~dll~~~a~-----~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~l-GV~~GDrVaIls~N~~Ewvia~l 500 (1452)
T PTZ00297 427 RSLGEMWERSVT-----RHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLAL-GVRPGDVIGVDCEASRNIVILEV 500 (1452)
T ss_pred CCHHHHHHHHHH-----HCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHH
Confidence 466676666654 779999986321112236799999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc---ccccccc---------------
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS---NVVDIKS--------------- 1304 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~--------------- 1304 (1761)
||+++|+++||+.+. .+++.+++++++++++|++.+....+...... .++....
T Consensus 501 A~~~~GaV~VPly~t--------~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i 572 (1452)
T PTZ00297 501 ACALYGFTTLPLVGK--------GSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNI 572 (1452)
T ss_pred HHHHcCCEEEeCCCC--------HHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCc
Confidence 999999999999541 23899999999999999998776655443211 1111110
Q ss_pred ----CCccccCCCCccchhhhccCCCCCCCEEEEEe---ccCCCCCCceEEccHHHHHHHHHHHHHHc---CcCCCCeEE
Q psy14338 1305 ----WPTILDTDDMPKKKLAALYRAPTAEMLAYLDF---SVSTTGMLAGIKMSHAAVTSLCRSMKLAC---ELYPSRHIA 1374 (1761)
Q Consensus 1305 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~---TSGSTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~~ 1374 (1761)
|.++..... ..........+++|++.|+| ||||||.||||++||+|++..+....... ...++|+.+
T Consensus 573 ~~~s~~~ll~~G~---~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~L 649 (1452)
T PTZ00297 573 TLIPYEFVEQKGR---LCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMV 649 (1452)
T ss_pred ceeeHHHHHhcCc---ccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEE
Confidence 000100000 00001122347889999996 99999999999999999999998876533 456778999
Q ss_pred EEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhh------
Q psy14338 1375 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLK------ 1448 (1761)
Q Consensus 1375 ~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~------ 1448 (1761)
.++|++|.++. ...+.+++.|+++.. +++..+++.|+++++|+++++|.+|..+.+.+..+.....
T Consensus 650 s~LPLaHI~er-~~~~~~l~~G~~I~~-------~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~l 721 (1452)
T PTZ00297 650 HFTPFAMLFNR-VFVLGLFAHGSAVAT-------VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWL 721 (1452)
T ss_pred EechHHHHHHH-HHHHHHHHcCCEEEe-------CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 99999998885 446777899998863 4688999999999999999999999988665432211100
Q ss_pred -------------ccCCC----------------CCcceEEEeecC--CCChHHHHHHHHHHHhhCCCCCcccccccccc
Q psy14338 1449 -------------ARNIA----------------LGCVRTCVVVAE--ERPRIHLTSAFSKLFSALGLSPRAVSTSFGCR 1497 (1761)
Q Consensus 1449 -------------~~~~~----------------l~~Lr~v~~gGe--~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~t 1497 (1761)
..... -..+|.+++||. +++. .+. .+ ..+..+||.|
T Consensus 722 f~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~-~l~---------~~---i~i~~g~glT 788 (1452)
T PTZ00297 722 FERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSF-SLL---------EH---ISVCYVPCLR 788 (1452)
T ss_pred HHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccCh-HHh---------CC---ceEEEecceE
Confidence 00000 035777777763 3333 111 01 2355567777
Q ss_pred ccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcC-CCCCCCCCCcceEEEEcCC
Q psy14338 1498 VNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP-ETKGQCGDSHLGEIWVQSP 1576 (1761)
Q Consensus 1498 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~-~~~~~~p~G~~GEL~i~g~ 1576 (1761)
|.. +... +...+ ..|+|+||++++|.|. +.+.. +..|||+++
T Consensus 789 E~~--~~~~----------------------------~~~~~--~~G~PlpgvEvKI~~~~E~~~~---~~~GEIlvr-- 831 (1452)
T PTZ00297 789 EVF--FLPS----------------------------EGVFC--VDGTPAPSLQVDLEPFDEPSDG---AGIGQLVLA-- 831 (1452)
T ss_pred Eee--eecC----------------------------CCCcc--cCCeecCceEEEEcccccccCC---CCCCeEEEE--
Confidence 721 1110 11111 2499999999999873 32221 235999995
Q ss_pred cccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEE-eC
Q psy14338 1577 HNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIM-LR 1655 (1761)
Q Consensus 1577 ~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Ik-i~ 1655 (1761)
|++ +|+.|++.+ ++| ++| |+ |.|+||+||.|| .+
T Consensus 832 -----~~k---dpe~T~e~~----------~gW---------------~~d--------G~----L~IidRkKdlikls~ 866 (1452)
T PTZ00297 832 -----KKG---EPRRTLPIA----------AQW---------------KRD--------RT----LRLLGPPLGILLPVA 866 (1452)
T ss_pred -----ECC---ChHHHHHhh----------CcC---------------ccC--------Ce----EEEEeccccceECCC
Confidence 457 999999843 244 467 99 999999999999 58
Q ss_pred CeecChHHHHHHHHHhccCcceeEEEeeCC-eEEEEEEeCCCchh--------------------Hhh--------HHHH
Q psy14338 1656 GMRYHPIDIENSVMRAHKKIAECAVFTWTN-LLVVVVELDGNESE--------------------ALD--------LVPL 1706 (1761)
Q Consensus 1656 G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~~-~~~a~v~~~~~~~~--------------------~~~--------l~~~ 1706 (1761)
|++|.|..||+ ++..+|.|.+++|+|.+. .++|+|+++..... ..+ +++.
T Consensus 867 GEyVaP~~IE~-~l~~sp~I~qi~V~Gd~~k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~ 945 (1452)
T PTZ00297 867 YEYVIAAELER-IFSQSRYVNDIFLYADPSRPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTAD 945 (1452)
T ss_pred CcEEcHHHHHH-HHhcCCCccEEEEEecCCCceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHH
Confidence 99999999999 899999999999999653 58888876422111 112 2222
Q ss_pred H---H-HHHhhhcCceeeEEEEECCCCc-----cCCCchhhhHHHHHHHHHcCCCChhhhh
Q psy14338 1707 V---T-NAVLEEHHLIVGVAVVVDPGVV-----PINSRGEKQRMHLRDGFLADQLDPIYVA 1758 (1761)
Q Consensus 1707 l---~-~~~Lp~~~~vP~~i~~v~~~~l-----P~t~~GKvdR~~L~~~~~~~~~~~~~~~ 1758 (1761)
+ . ...+. .+.+++.|.++++ +| -+||+.|+.|+.+.+.| ..+++++|..
T Consensus 946 i~~V~~~n~l~-~~ei~k~~~Ll~~-~Ft~enGlLTPTlKlKR~~I~~kY-~~~Ie~LY~~ 1003 (1452)
T PTZ00297 946 FACIAKENGLH-PSNVPEYVHLHPH-AFKDHSTFLTPYGKIRRDAVHSYF-SSVIERFYSD 1003 (1452)
T ss_pred HHHHHHHhCcC-ccceeeEEEEeCC-CCCCCCCcCChhhhhhHHHHHHHH-HHHHHHHhcc
Confidence 2 1 11133 5788887777652 45 47999999999999999 7778888864
|
|
| >TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=364.07 Aligned_cols=286 Identities=16% Similarity=0.111 Sum_probs=226.7
Q ss_pred CCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCC--CCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCcc
Q psy14338 254 DTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTE--GENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYAL 331 (1761)
Q Consensus 254 ~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~ 331 (1761)
+..+|++|||||||.||||+++|+++.+.+.+....++++. .+++++++|++|..++...++.++..|+++++.+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~--- 171 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA--- 171 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC---
Confidence 55889999999999999999999999999888888888754 4689999999998887556889999999999987
Q ss_pred ccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccc
Q psy14338 332 MKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAIC 411 (1761)
Q Consensus 332 ~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~ 411 (1761)
.+++..+++.++.+ |++.++| +++..++... .+++++|. ++| |+++++++.+++.+. |.. .++
T Consensus 172 -~~~~~~~l~~i~~~--t~~~~~P-~~l~~l~~~~----~~l~slr~-i~g--Ga~l~~~l~~~~~~~----g~~--~v~ 234 (386)
T TIGR02372 172 -AAPASGIMRHARPG--DLIVGTP-FIWEQLADLD----YRLPGVVG-VSS--GAPSTAATWRCLLAA----GLA--RLL 234 (386)
T ss_pred -CCChHHHHHhhccC--CEEEECc-HHHHHHHhhC----cCCCccee-Eec--CCCCCHHHHHHHHHh----ccc--chh
Confidence 67888888888643 7888886 4777776532 34677886 567 889999999999875 221 389
Q ss_pred cccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCC
Q psy14338 412 PCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDE 491 (1761)
Q Consensus 412 n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~ 491 (1761)
|.||+||++.+++... +...|+|+|+.++.+ | ++.
T Consensus 235 ~~YG~TEt~~i~~~~~-----------------------------------~~~~~~~~p~~~~~~-~-~~~-------- 269 (386)
T TIGR02372 235 EVYGATETGGIGLREA-----------------------------------PDDPFRLLPDLACFA-D-TLS-------- 269 (386)
T ss_pred heeccccccccccccC-----------------------------------CCCCcccCCCccccC-C-Ccc--------
Confidence 9999999976543211 112466777655432 1 110
Q ss_pred ceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHH
Q psy14338 492 VGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDI 571 (1761)
Q Consensus 492 ~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eI 571 (1761)
+ .| ...||+|||+|+|+++|+++|+||+||+||++|+||+|.||
T Consensus 270 --~---------~g-------------------------~~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eI 313 (386)
T TIGR02372 270 --S---------AG-------------------------LARRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHV 313 (386)
T ss_pred --C---------CC-------------------------ccceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHH
Confidence 0 01 03578999999999999999999999999999999999999
Q ss_pred HHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCCC----HHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCc
Q psy14338 572 IATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDCS----EEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYL 647 (1761)
Q Consensus 572 E~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~~----~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~l 647 (1761)
|++|.+++.| .+++|.. .++++++++++.++.+ .++++++++++||.|++|..+ ..+++|
T Consensus 314 E~~l~~~p~V-----~~~~v~~----~g~~~~a~vv~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i-------~~~~~l 377 (386)
T TIGR02372 314 RDILERNPRV-----RAAAVRL----DGRRLKAFIVVAEDADEAELEIELRATAARHLPAPARPDRF-------RFGTEL 377 (386)
T ss_pred HHHHHcCCCc-----eEEEEEc----CCceEEEEEEECCCCChHHHHHHHHHHHHHhCCCCCCCcEE-------EEcccC
Confidence 9999998887 6777753 4678999998876533 458889999999999999986 446999
Q ss_pred cCCCCCccc
Q psy14338 648 PKTPLGGIH 656 (1761)
Q Consensus 648 P~t~~GKid 656 (1761)
|+|++||++
T Consensus 378 P~t~~GKi~ 386 (386)
T TIGR02372 378 PRTGAGKLA 386 (386)
T ss_pred CCCCCCCcC
Confidence 999999985
|
Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names. |
| >KOG1178|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=382.24 Aligned_cols=512 Identities=14% Similarity=0.111 Sum_probs=339.2
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCC--CceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCc
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPN--GKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDP 157 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~--g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~ 157 (1761)
..++++.|++.+...|+..+..+--.. .....++||++....+|.+++.|. ..|...|+.|++++.++
T Consensus 35 ~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~--------~~~~~~~~~v~i~~~~~-- 104 (1032)
T KOG1178|consen 35 MGTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLV--------SLGSLRGTTVAIYMLPS-- 104 (1032)
T ss_pred hcchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhh--------hcccccCceEEEeccCc--
Confidence 457888999999999999887664211 111147999999999999999999 88899999999999999
Q ss_pred hhHHHHHHHHHHhCCeEEecCCCCCcCccch---hHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEE
Q psy14338 158 INFLCAFYGCIFAGIVPVPIEVPLTRRDAGS---QQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFV 234 (1761)
Q Consensus 158 ~~~vva~lAvlkaG~~~vpldp~~p~~~~~~---~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (1761)
.++++.+++++++|.+++|+||.+|. .... .|+.+.+......++.-......... ...+......
T Consensus 105 ~d~~v~v~~~~~~g~~~~~idp~~~~-~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~----------~~~~~~sv~~ 173 (1032)
T KOG1178|consen 105 VDLVVSVFAVLAAGLTFLPIDPSWPN-SELAGYLMRIAHFLTSVELEIVRRLNIIDILLN----------SLFPKLSVET 173 (1032)
T ss_pred CCeeeeeeehhhcceEEEEecCCCcc-cccchHHHhhhhhheeccceehhhhhhHHHHhh----------ccccccchhh
Confidence 99999999999999999999999992 1111 23333333332222211111000000 0000000000
Q ss_pred -eccccC--CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhH
Q psy14338 235 -TEHLAK--TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLW 311 (1761)
Q Consensus 235 -~~~~~~--~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 311 (1761)
.+.+.. ...........-+|..|++.|||||||.||||.-+|..+.+...|+...+..+.++++-.....+|+-.+.
T Consensus 174 ~~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~ 253 (1032)
T KOG1178|consen 174 IADSFQMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQ 253 (1032)
T ss_pred ccchhhhhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchH
Confidence 000000 00111122345678899999999999999999999999999999999999999999885555566777777
Q ss_pred HHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCC----------CC---CCCCceeE
Q psy14338 312 HSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDH----------KD---ISLSSLRL 378 (1761)
Q Consensus 312 ~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~----------~~---~~l~~Lr~ 378 (1761)
. .+.+++.++..++++.......+..|.+.+++++++..+++| ++.+.++..... .. ...+.||.
T Consensus 254 ~-~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~-a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl 331 (1032)
T KOG1178|consen 254 K-FIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLP-AMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKL 331 (1032)
T ss_pred H-HHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeech-hhhhhhhhhcCcchhhhhhhhhcccccccchhhee
Confidence 5 666666555555555333344589999999999999999996 475554432211 11 12347999
Q ss_pred EEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCcc
Q psy14338 379 LLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSL 458 (1761)
Q Consensus 379 v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (1761)
..++ ||+....+...+...+... -...-|++++.+...+......... .+....+...+.
T Consensus 332 ~~~~--~ep~~v~l~~s~~~~~~~~-----~~~~~y~s~~~~~~~s~~~~~~s~~----------ll~~~~v~~~p~--- 391 (1032)
T KOG1178|consen 332 VVLG--GEPLLVSLYTSTFDLLAEI-----FFGLPYLSTDPTGLVSYDDFSPSKV----------LLTNENVYSVPK--- 391 (1032)
T ss_pred eeec--CCccchhhhhhhhhcccce-----eeeecccCCCCccceeHHhhCcccc----------eecceeEEeccc---
Confidence 9999 9998887777655554332 1334488888765444332110000 000000000000
Q ss_pred CcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEE----EEecCCccccccCCCccccccccccccccCCCccCCCce
Q psy14338 459 TSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEI----CVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTY 534 (1761)
Q Consensus 459 ~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL----~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~ 534 (1761)
....+|-+. .+.+....+.+ ++.++.+.. +-.+.++..| -.|.+.|.++.....| ..+|+
T Consensus 392 ---~~~~~~~~~---~~~~~~~~~~~--~~~~v~~~~l~~~~~~~~~~~~g-----~~~~~~~~~~~~~~d~---~~~r~ 455 (1032)
T KOG1178|consen 392 ---FDSIIGSLT---VLESLYRAGGE--GEGGVGKGCLGAEQNLSSWVVDG-----YSTPENFLPNFLTVDG---VKARI 455 (1032)
T ss_pred ---hhhccCCCc---ceeeeeccCcc--cCCcccceeecccccccceeecc-----ccchhhcCCccccccc---chhhc
Confidence 000222222 22333333321 222222222 2223333333 2344444444332222 34899
Q ss_pred EeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCC-
Q psy14338 535 TRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDC- 612 (1761)
Q Consensus 535 yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~- 612 (1761)
|||||+||..++|.+.|.||.|+|||+||+||+++||+.++..++.+ .++.+..+.+. -++.+++|++.....
T Consensus 456 y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v-----~~~itl~~~~~~~~~~l~aFvv~~~~~~ 530 (1032)
T KOG1178|consen 456 YRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDV-----KEAITLARENSTVGQTLLAFVVERGGSK 530 (1032)
T ss_pred ccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcch-----hhhheeeeeccccCceEEEEEeccCCCC
Confidence 99999999999999999999999999999999999999999998766 78888888743 478899999987653
Q ss_pred --CHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 613 --SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 613 --~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
....|+.++++.|+.||+|+.+ |+++++|+|+|||||+++|.+
T Consensus 531 ~~~~~~i~~~l~~~La~y~vPs~~-------V~l~~vPl~~~GKvDkkaL~~ 575 (1032)
T KOG1178|consen 531 SVLIRDIRNYLKKELASYMLPSLV-------VPLAKVPLNPNGKVDKKALLE 575 (1032)
T ss_pred chhHHHHHHhhcccccceecceEE-------EEhhhCCcCCCCCcChhhhhh
Confidence 3567999999999999999975 888999999999999999998
|
|
| >TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=356.21 Aligned_cols=287 Identities=14% Similarity=0.109 Sum_probs=230.5
Q ss_pred CCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCC--CeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCc
Q psy14338 1329 EMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPS--RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE 1406 (1761)
Q Consensus 1329 ~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~--d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~ 1406 (1761)
+..++++|||||||.||||+++|+++.+.+......+++..+ ++++.++|++|.+++.+.++.++..|+++++.+.
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~-- 172 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA-- 172 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC--
Confidence 558999999999999999999999999999888888887543 5788889988888887778889999999998874
Q ss_pred cccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCC
Q psy14338 1407 VEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLS 1486 (1761)
Q Consensus 1407 ~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~ 1486 (1761)
+++..+++.++.+ |+++++|++++.+.+. ..++++++. ++||+++++ .+.+++.+. |+
T Consensus 173 --~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~-----------~~~l~slr~-i~gGa~l~~-~l~~~~~~~----g~- 230 (386)
T TIGR02372 173 --APASGIMRHARPG--DLIVGTPFIWEQLADL-----------DYRLPGVVG-VSSGAPSTA-ATWRCLLAA----GL- 230 (386)
T ss_pred --CChHHHHHhhccC--CEEEECcHHHHHHHhh-----------CcCCCccee-EecCCCCCH-HHHHHHHHh----cc-
Confidence 6888888888654 8899999999998652 245677886 688999998 777777653 22
Q ss_pred CccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCC
Q psy14338 1487 PRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDS 1566 (1761)
Q Consensus 1487 e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G 1566 (1761)
..+++.||+||++.+++... + ...|+|+|+.++.+ | + +.
T Consensus 231 -~~v~~~YG~TEt~~i~~~~~---------------------------~-----~~~~~~~p~~~~~~-~-~-~~----- 269 (386)
T TIGR02372 231 -ARLLEVYGATETGGIGLREA---------------------------P-----DDPFRLLPDLACFA-D-T-LS----- 269 (386)
T ss_pred -cchhheeccccccccccccC---------------------------C-----CCCcccCCCccccC-C-C-cc-----
Confidence 36899999999765432100 0 01567777766543 1 1 10
Q ss_pred cceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEc
Q psy14338 1567 HLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVG 1646 (1761)
Q Consensus 1567 ~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~G 1646 (1761)
+ .|+ ..||+|||+|+| |+| |+ ++|+|
T Consensus 270 ---~---------~g~------------------------~~~~~tgD~g~~------d~~--------G~----l~i~G 295 (386)
T TIGR02372 270 ---S---------AGL------------------------ARRLDLQDRLAW------DKD--------GG----FTILG 295 (386)
T ss_pred ---C---------CCc------------------------cceeecCceEEE------cCC--------Cc----EEEec
Confidence 0 011 237899999999 999 99 99999
Q ss_pred ccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeCCeEEEEEEeCCC-ch--hHhhHHHHHHHHHhhhcCceeeEEE
Q psy14338 1647 ALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGN-ES--EALDLVPLVTNAVLEEHHLIVGVAV 1723 (1761)
Q Consensus 1647 R~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~~~~~a~v~~~~~-~~--~~~~l~~~l~~~~Lp~~~~vP~~i~ 1723 (1761)
|+||+||++|+||+|.|||+ ++.+||+|.+|+|...++++.++|+.... .. ..++++++++++ |+ .|++|..+.
T Consensus 296 R~dd~Ik~~G~~V~p~eIE~-~l~~~p~V~~~~v~~~g~~~~a~vv~~~~~~~~~~~~~l~~~~~~~-L~-~~~~P~~i~ 372 (386)
T TIGR02372 296 RKDEILQVGGVNVSPGHVRD-ILERNPRVRAAAVRLDGRRLKAFIVVAEDADEAELEIELRATAARH-LP-APARPDRFR 372 (386)
T ss_pred ccCCEEEECCEEEcHHHHHH-HHHcCCCceEEEEEcCCceEEEEEEECCCCChHHHHHHHHHHHHHh-CC-CCCCCcEEE
Confidence 99999999999999999999 89999999999999888899999887532 12 246889999987 88 999999999
Q ss_pred EECCCCccCCCchhhh
Q psy14338 1724 VVDPGVVPINSRGEKQ 1739 (1761)
Q Consensus 1724 ~v~~~~lP~t~~GKvd 1739 (1761)
+++ +||+|++||++
T Consensus 373 ~~~--~lP~t~~GKi~ 386 (386)
T TIGR02372 373 FGT--ELPRTGAGKLA 386 (386)
T ss_pred Ecc--cCCCCCCCCcC
Confidence 999 99999999985
|
Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names. |
| >KOG1178|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=356.35 Aligned_cols=518 Identities=16% Similarity=0.160 Sum_probs=323.4
Q ss_pred cccccccccCCCCcCCCCCCCceEEccC---CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1165 GYLGFLRRTSPAGVAGAPVPPGVSSVDT---RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1165 ~~~~~~~~~~~~~a~~~P~~~Av~~~d~---~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
++..|.+.+. ..|+..+..+.-. ...-.++||++....++.+++.|... |...|+.|++++..+.++++.+
T Consensus 38 ~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~-~~~~~~~v~i~~~~~~d~~v~v 111 (1032)
T KOG1178|consen 38 LEDSFRRELA-----EAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSL-GSLRGTTVAIYMLPSVDLVVSV 111 (1032)
T ss_pred hhhHHHHHHh-----hcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhc-ccccCceEEEeccCcCCeeeee
Confidence 3444444443 4477766655322 12246899999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHH---HHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccch
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPT---VRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~r---l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1318 (1761)
++++++|.+++|+||++|. ....++ +++.+......++.-.........+......+.. ..+.+.. .....
T Consensus 112 ~~~~~~g~~~~~idp~~~~--~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~--~~~~f~~--~~~~~ 185 (1032)
T KOG1178|consen 112 FAVLAAGLTFLPIDPSWPN--SELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVET--IADSFQM--VLHNE 185 (1032)
T ss_pred eehhhcceEEEEecCCCcc--cccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhh--ccchhhh--hhccC
Confidence 9999999999999999992 111112 2222222222221111111111111000000000 0000000 00000
Q ss_pred hhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCce
Q psy14338 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHH 1398 (1761)
Q Consensus 1319 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~ 1398 (1761)
........-++..+++.|||||||.||||.-+|..+.+...|....+..+.+++.-.....+++... ...+.++++.+.
T Consensus 186 ~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i-~~~~~~~L~~~~ 264 (1032)
T KOG1178|consen 186 DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTI-QKFIGALLFNGN 264 (1032)
T ss_pred CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccch-HHHHhhHhhcCc
Confidence 1111123456778999999999999999999999999999999999999888876333344444444 555566555555
Q ss_pred EEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCC---cchhhcc---CCCCCcceEEEeecCCCChHHH
Q psy14338 1399 SILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGS---IPQLKAR---NIALGCVRTCVVVAEERPRIHL 1472 (1761)
Q Consensus 1399 ~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~---~~~~~~~---~~~l~~Lr~v~~gGe~l~~~~l 1472 (1761)
.++.+.....-++..|.+.+++++++..+.+|++.++++...... +.+...- ....+.|+...++||+.+. .+
T Consensus 265 ~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v-~l 343 (1032)
T KOG1178|consen 265 NLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLV-SL 343 (1032)
T ss_pred eeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccch-hh
Confidence 554443332334899999999999999999999988887654331 1111111 1223479999999999888 55
Q ss_pred HHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEE
Q psy14338 1473 TSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKV 1552 (1761)
Q Consensus 1473 ~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 1552 (1761)
.-.+...+.. .-...-|+.++...-+....-.+...... ...+..+..... -+|-+. ..
T Consensus 344 ~~s~~~~~~~-----~~~~~~y~s~~~~~~~s~~~~~~s~~ll~-------~~~v~~~p~~~~------~~~~~~---~~ 402 (1032)
T KOG1178|consen 344 YTSTFDLLAE-----IFFGLPYLSTDPTGLVSYDDFSPSKVLLT-------NENVYSVPKFDS------IIGSLT---VL 402 (1032)
T ss_pred hhhhhhcccc-----eeeeecccCCCCccceeHHhhCcccceec-------ceeEEeccchhh------ccCCCc---ce
Confidence 4433322211 11222255555433322222111111100 000000000000 122222 22
Q ss_pred EEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcc-cCCCCCceEeeCceeEEeccCCCCCCCCCC
Q psy14338 1553 IIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLV-TGNTGELYARTGYLGFLRRTSPAGVAGAPV 1631 (1761)
Q Consensus 1553 ~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~-~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~ 1631 (1761)
.+.. ..+.+++.++.+...-.+-.+...+- +...+.+.|.++.. .....+++|||||+||. ..+
T Consensus 403 ~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~----~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~------l~n---- 467 (1032)
T KOG1178|consen 403 ESLY-RAGGEGEGGVGKGCLGAEQNLSSWVV----DGYSTPENFLPNFLTVDGVKARIYRTGDNGRS------LKN---- 467 (1032)
T ss_pred eeee-ccCcccCCcccceeecccccccceee----ccccchhhcCCcccccccchhhccccccccee------ecC----
Confidence 2222 22444444444443333222222111 11245555555443 33456899999999999 667
Q ss_pred CCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC--chhHhhHH
Q psy14338 1632 PPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN--ESEALDLV 1704 (1761)
Q Consensus 1632 ~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~--~~~~~~l~ 1704 (1761)
|. +.|.||.|+|||+||+||+++||++ ++..||.|.++.+... ++.+.+||+..+. .....+|+
T Consensus 468 ----g~----l~~~GR~d~qIK~rG~Ri~L~ei~t-~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~~~i~ 538 (1032)
T KOG1178|consen 468 ----GG----LEISGRADRQIKDRGVRIELGELNT-VVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSVLIRDIR 538 (1032)
T ss_pred ----CC----EEEEEeccceEEEccEEEehhhhch-hhccCcchhhhheeeeeccccCceEEEEEeccCCCCchhHHHHH
Confidence 88 9999999999999999999999999 7888999999998863 4568899887543 33456899
Q ss_pred HHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1705 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1705 ~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
.++..+ |+ .||+|+.+++++ ++|+|++||||+++|.+
T Consensus 539 ~~l~~~-La-~y~vPs~~V~l~--~vPl~~~GKvDkkaL~~ 575 (1032)
T KOG1178|consen 539 NYLKKE-LA-SYMLPSLVVPLA--KVPLNPNGKVDKKALLE 575 (1032)
T ss_pred Hhhccc-cc-ceecceEEEEhh--hCCcCCCCCcChhhhhh
Confidence 999987 88 999999999999 99999999999999998
|
|
| >TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=339.69 Aligned_cols=319 Identities=15% Similarity=0.200 Sum_probs=232.0
Q ss_pred CCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHH---HHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEe
Q psy14338 251 LTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRAL---TQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYI 327 (1761)
Q Consensus 251 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~ 327 (1761)
..++++++++|||||||.||+|+++|+++....... ...+++.++|+++...++.+..+.+...+.++..|++++..
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 356789999999999999999999999987654332 33468999999998877665444443356788899999887
Q ss_pred CCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCC--CCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCC
Q psy14338 328 PYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKD--ISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGL 405 (1761)
Q Consensus 328 ~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~--~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~ 405 (1761)
+ ..++..+++.|+++++|++..+|+ ++..|+....... ....+||.+++| ||+++++..+.|.+.+ |.
T Consensus 152 ~----~~~~~~~~~~i~~~~~t~l~~~Ps-~l~~L~~~~~~~~~~~~~~~lr~i~~~--ge~l~~~~~~~i~~~~---g~ 221 (422)
T TIGR02155 152 S----GGQTEKQVQLIQDFKPDIIMVTPS-YMLNLLEELKRMGIDPAQTSLQVGIFG--AEPWTNAMRKEIEARL---GM 221 (422)
T ss_pred C----CCCHHHHHHHHHHHCCCEEEEcHH-HHHHHHHHHHHcCCCcccCceEEEEEe--CCcCCHHHHHHHHHHh---CC
Confidence 7 456899999999999999999975 6666554322111 123589999999 9999999999999888 54
Q ss_pred CCCccccccccccccc--eEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCC--CcEEEEEeC-
Q psy14338 406 RPDAICPCASSSECLT--VSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP--GCIMTVVKM- 480 (1761)
Q Consensus 406 ~~~~l~n~YG~TE~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~--~~~~~I~d~- 480 (1761)
+ ++|.||+||++. ++..... ...|.++. +..+.|+|+
T Consensus 222 ~---v~~~YG~tE~~~~~~~~~~~~-----------------------------------~~~g~~~~~~~~~~eivd~~ 263 (422)
T TIGR02155 222 K---ATDIYGLSEVIGPGVAMECVE-----------------------------------TQDGLHIWEDHFYPEIIDPH 263 (422)
T ss_pred c---eEecccchhhcCCceeecccc-----------------------------------cCCCceEecCeeEEEEECCC
Confidence 3 999999999842 2211100 01233332 456789996
Q ss_pred CCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCC-C-----eEEEEec
Q psy14338 481 DSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPG-G-----LVFVCGS 554 (1761)
Q Consensus 481 ~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~d-G-----~l~~~GR 554 (1761)
+++ ++|.|+.|||+|+| +|++.|. .+||+|||+++++++ | .++|.||
T Consensus 264 ~g~--~v~~Ge~Gelvvt~------------~~~~~~p-------------~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR 316 (422)
T TIGR02155 264 TGE--VLPDGEEGELVFTT------------LTKEALP-------------VIRYRTRDLTRLLPGTARTMRRMDRITGR 316 (422)
T ss_pred CCC--CCCCCCeeEEEEec------------CCccccc-------------eeeEEcCcEEEEECCCCCcccccccccCc
Confidence 454 68999999999987 3445552 579999999999876 4 4789999
Q ss_pred cCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEe-cCCCceEEEEEEeCCCC---C--------HHHHHHHHH
Q psy14338 555 RDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIR-VLRDERICVIAEQRPDC---S--------EEESFQWMS 622 (1761)
Q Consensus 555 ~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~-~~~~~~l~a~v~~~~~~---~--------~~~l~~~l~ 622 (1761)
.||+||++|.+|+|.|||++|.+++.+ .....+... ....+.+.+.++...+. . .++|+++++
T Consensus 317 ~~d~i~~~G~~v~p~eie~~l~~~~~v-----~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~ 391 (422)
T TIGR02155 317 SDDMLIIRGVNVFPTQLEEVILKMDEL-----SPHYQLELTRNGHMDELTLKVELKPESYTLRLHEQASLLAGEIQHTIK 391 (422)
T ss_pred cCCeEEECCEEECHHHHHHHHHhCcCc-----CCCEEEEEEcCCCccEEEEEEEEecCcccccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999998887 333333333 33345677777665432 1 234555555
Q ss_pred HHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHH
Q psy14338 623 RVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLS 658 (1761)
Q Consensus 623 ~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~ 658 (1761)
+.+..++ .+.|+.+++||+|+ ||+.|.
T Consensus 392 ~~~~~~~--------~v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 392 QEVGVSM--------DVHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred hccCcEE--------EEEEECCCCccCCC-CCceEE
Confidence 5554432 23577789999988 999763
|
Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions. |
| >TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=327.14 Aligned_cols=325 Identities=14% Similarity=0.112 Sum_probs=229.1
Q ss_pred CCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHH---HHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeC
Q psy14338 1327 TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM---KLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 1403 (1761)
Q Consensus 1327 ~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~ 1403 (1761)
.++++++++|||||||.||+|+++|.++....... ...+++.++|+++...+..+..+.....+..+..|++++.++
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 45678999999999999999999999987654433 334688888887765554433343334566788899998877
Q ss_pred CCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhC
Q psy14338 1404 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 1483 (1761)
Q Consensus 1404 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~ 1483 (1761)
. .++..+++.|+++++|+++++|+++..|++.... ........+||.+++|||++++ .+.+.+.+.|+
T Consensus 153 ~----~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~-----~~~~~~~~~lr~i~~~ge~l~~-~~~~~i~~~~g-- 220 (422)
T TIGR02155 153 G----GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKR-----MGIDPAQTSLQVGIFGAEPWTN-AMRKEIEARLG-- 220 (422)
T ss_pred C----CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHH-----cCCCcccCceEEEEEeCCcCCH-HHHHHHHHHhC--
Confidence 4 4678999999999999999999999998764311 0011223589999999999999 77788887774
Q ss_pred CCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccC--CcEEEEEcCCCCC
Q psy14338 1484 GLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLP--GVKVIIANPETKG 1561 (1761)
Q Consensus 1484 g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~--~~~~~v~d~~~~~ 1561 (1761)
+.+++.||+||+++.... +. +.. ...|.+++ +..+.|+|+++++
T Consensus 221 ----~~v~~~YG~tE~~~~~~~-~~----------~~~-------------------~~~g~~~~~~~~~~eivd~~~g~ 266 (422)
T TIGR02155 221 ----MKATDIYGLSEVIGPGVA-ME----------CVE-------------------TQDGLHIWEDHFYPEIIDPHTGE 266 (422)
T ss_pred ----CceEecccchhhcCCcee-ec----------ccc-------------------cCCCceEecCeeEEEEECCCCCC
Confidence 578999999997421000 00 000 00233333 4667899987799
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
++|+|+.|||+++|. +.+.| ..+||+|||+|++ +++ ||++. ...
T Consensus 267 ~v~~Ge~Gelvvt~~---------------~~~~~---------p~~ry~TGDl~~~------~~~-----~Gr~~-~~~ 310 (422)
T TIGR02155 267 VLPDGEEGELVFTTL---------------TKEAL---------PVIRYRTRDLTRL------LPG-----TARTM-RRM 310 (422)
T ss_pred CCCCCCeeEEEEecC---------------Ccccc---------ceeeEEcCcEEEE------ECC-----CCCcc-ccc
Confidence 999999999999873 12233 2469999999999 553 33221 111
Q ss_pred EEEEcccCCeEEeCCeecChHHHHHHHHHhccCcce-eEEEe----eCCeEEEEEEeCCCc------hh----HhhHHHH
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAE-CAVFT----WTNLLVVVVELDGNE------SE----ALDLVPL 1706 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~-a~Vv~----~~~~~~a~v~~~~~~------~~----~~~l~~~ 1706 (1761)
++|.||.||+||++|.+|+|.|||. ++..||+|.. +.++. ..+.+.+.|+..... .+ .++|+++
T Consensus 311 ~~i~GR~~d~i~~~G~~v~p~eie~-~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~ 389 (422)
T TIGR02155 311 DRITGRSDDMLIIRGVNVFPTQLEE-VILKMDELSPHYQLELTRNGHMDELTLKVELKPESYTLRLHEQASLLAGEIQHT 389 (422)
T ss_pred ccccCccCCeEEECCEEECHHHHHH-HHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcccccchHHHHHHHHHHHHH
Confidence 6899999999999999999999999 8999999984 33332 124666666653211 11 3456666
Q ss_pred HHHHHhhhcCceeeEEEEECCCCccCCCchhhhH
Q psy14338 1707 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQR 1740 (1761)
Q Consensus 1707 l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR 1740 (1761)
++++ +. .+ ..|.++..++||+|+ ||+.|
T Consensus 390 ~~~~-~~-~~---~~v~~~~~~~lp~~~-GK~~~ 417 (422)
T TIGR02155 390 IKQE-VG-VS---MDVHLVEPGSLPRSE-GKARR 417 (422)
T ss_pred HHhc-cC-cE---EEEEEECCCCccCCC-CCceE
Confidence 6654 44 33 346666555999988 99976
|
Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions. |
| >KOG3628|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-28 Score=294.35 Aligned_cols=559 Identities=23% Similarity=0.349 Sum_probs=402.9
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++++-+++.+||.+|+...+..|.+..++||++|..++.++|.+|+.+.. +++||.|++++++| +|+
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~-------lk~Gd~V~Lmy~~s--ie~ 840 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGH-------LKAGDHVVLMYPPS--IEF 840 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhccc-------CCCCCeEEEEcCCh--HHH
Confidence 589999999999999999999999888888999999999999999999995443 99999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcC-ccchhHHHHHHhcCCCcEEEEcccccccCcccccc---------cceeccCCCcc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRR-DAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG---------EVVAFKGWPKL 230 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~-~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 230 (1761)
+++++||+.+|.+.+|+.|..... ......+..|++..++..|+++......+..-... .+++.++.+..
T Consensus 841 vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t 920 (1363)
T KOG3628|consen 841 VAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPET 920 (1363)
T ss_pred HHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchh
Confidence 999999999999999999865421 01234688999999999999998765544332111 11112221110
Q ss_pred eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhh
Q psy14338 231 TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
|..............+....+++.+|||=|.--++|.--||..+|.++++..+.......+.+..-++.+++++-..|+
T Consensus 921 -~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf 999 (1363)
T KOG3628|consen 921 -IRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGF 999 (1363)
T ss_pred -hhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhH
Confidence 0000000011112223344577899999999899999999999999999999999999999988889999988888888
Q ss_pred HHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCC-------CCCCCCceeEEEecC
Q psy14338 311 WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDH-------KDISLSSLRLLLVGD 383 (1761)
Q Consensus 311 ~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~-------~~~~l~~Lr~v~~gg 383 (1761)
..-.+...++|...++.++..+..+|..|+..|++++|.-++.+-.++ ......-.. ...+.++ ..++..
T Consensus 1000 ~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tl-n~c~~~l~t~~enl~~~gnn~s~-s~vv~~- 1076 (1363)
T KOG3628|consen 1000 NHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTL-NLCQKGLETSVENLSKRGNNTSS-SIVVPA- 1076 (1363)
T ss_pred HHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHH-HHHHhccccccchhhhhhccccc-ceeeec-
Confidence 766788899999999988877788999999999999998887653322 222111111 1122222 333333
Q ss_pred CCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccc
Q psy14338 384 GANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTL 463 (1761)
Q Consensus 384 ~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1761)
-+.....+++.|.+.+...|+.|..+--.|+.-=.-.+|..... ...+....+....+.++.++......+.....
T Consensus 1077 -~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~s---g~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L 1152 (1363)
T KOG3628|consen 1077 -EERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYS---GPEPTTVYLDARALREGRVRLVEVGAPHSLLL 1152 (1363)
T ss_pred -CCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhcccc---CCCCcceeechhhhhccceeeeecCCCCcccc
Confidence 34445677888888888878888777777775544333332110 01111222334445555555443322222333
Q ss_pred cccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCcccccccccccccc---CCCccCCCceEeecce
Q psy14338 464 QDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLA---DGTALSQDTYTRSGLL 540 (1761)
Q Consensus 464 ~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~---~g~~~~~~~~yrTGDl 540 (1761)
...|+..+++++.|++|+... +|..|+.||||+.+..-+.+|++- +.+ |..+-|.. .| ...+.+|-||||+
T Consensus 1153 ~dSG~~~~~~~i~IvnPEtk~-pc~dge~GEIW~~S~hnA~~~~~~---~d~-~~~~~fn~rl~~g-~~~~~sy~RTG~L 1226 (1363)
T KOG3628|consen 1153 YDSGKLPVYTDIAIVNPETKG-PCRDGELGEIWVNSAHNASCSFTI---GDE-LRSNHFNARLSSG-DLLGKSYARTGDL 1226 (1363)
T ss_pred ccCCcccccceeEEeCCcccc-ccccCCcceEEecccccccccccc---Cch-hhhhhhhhhcccc-ccccccceeeeee
Confidence 456888899999999999885 899999999999999999999874 333 54444421 11 1235789999999
Q ss_pred EEEeC------CC----eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCC
Q psy14338 541 GFLGP------GG----LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRP 610 (1761)
Q Consensus 541 ~~~~~------dG----~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~ 610 (1761)
|+... +| -||.+|-.++.+-+||.|..|.+||..+...|+-+ ..|+||.. +..+|.+++...
T Consensus 1227 GFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I----~~cavF~~----~glvVvviE~~g 1298 (1363)
T KOG3628|consen 1227 GFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSI----GGCAVFQA----TGLVVVVIECHG 1298 (1363)
T ss_pred eeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccc----cceeeEee----CCeEEEEEEecC
Confidence 99742 23 38999999999999999999999999999988876 89999984 667777777665
Q ss_pred CCCHHHHHH-HHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCCccee
Q psy14338 611 DCSEEESFQ-WMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPANV 674 (1761)
Q Consensus 611 ~~~~~~l~~-~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~~~~~ 674 (1761)
+....+|.- .....|.. +.+.+.++.||....+|+++.|--+|..+++.+..+.+...++
T Consensus 1299 q~~~~~LvPlIv~~vL~e----H~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~~~~v 1359 (1363)
T KOG3628|consen 1299 QQELADLVPLIVNVVLEE----HYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLDPIYV 1359 (1363)
T ss_pred chhHhhhhHHHHHHHHhh----cceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccceeee
Confidence 322222222 12333444 4556667889998999999999999999999999988877554
|
|
| >TIGR03335 F390_ftsA coenzyme F390 synthetase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=289.51 Aligned_cols=333 Identities=14% Similarity=0.147 Sum_probs=225.4
Q ss_pred CCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHH---cCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEe
Q psy14338 1326 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILI 1402 (1761)
Q Consensus 1326 ~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~ 1402 (1761)
...+++++|.|||||||+||+|+++|.++.......... .++.++|+++...+..++.+.....+.++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 345688999999999999999999999998776655444 48899999888887777666534445667788876543
Q ss_pred CCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhh
Q psy14338 1403 PPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSA 1482 (1761)
Q Consensus 1403 ~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~ 1482 (1761)
. .....++.|+++++|.+..+|+.+..+.+.+.. ........+||.+++|||++++ .+.+++.+.|+
T Consensus 163 ~------~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~-----~g~~~~~~~lr~ii~gGE~l~~-~~r~~ie~~~g- 229 (445)
T TIGR03335 163 G------KCTFPIRIIESYRPTGIVASVFKLLRLARRMKA-----EGIDPAESSIRRLVVGGESFAD-ESRNYVEELWG- 229 (445)
T ss_pred C------chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHH-----cCCCcccCcceEEEEcCCCCCH-HHHHHHHHHhC-
Confidence 3 234568999999999999999988777654211 0011124689999999999998 67777777663
Q ss_pred CCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccccc--CCcEEEEEcCCCC
Q psy14338 1483 LGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL--PGVKVIIANPETK 1560 (1761)
Q Consensus 1483 ~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~--~~~~~~v~d~~~~ 1560 (1761)
+.+++.||+||++. +..... ..|..+ +.+.+.|+|++++
T Consensus 230 -----~~v~~~YG~TE~~~-~~~c~~---------------------------------~~g~h~~~d~~~vEIvDp~~~ 270 (445)
T TIGR03335 230 -----CEVYNTYGSTEGTM-CGECQA---------------------------------VAGLHVPEDLVHLDVYDPRHQ 270 (445)
T ss_pred -----CcEEecCChhhhhh-eEEecC---------------------------------CCCccccCCceEEEEEcCCCC
Confidence 57999999999642 110000 023333 3577999999988
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccc
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHD 1640 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~ 1640 (1761)
.++|+|+.|||++++-.... +.+.+ |. ==|||||++++ ..+ .+|+||+.. .
T Consensus 271 ~~vp~Ge~GELvvT~L~~~~-----------~r~~~---Pl------iRYrtgD~~~~------~~~-~~C~CGr~~--~ 321 (445)
T TIGR03335 271 RFLPDGECGRIVLTTLLKPG-----------ERCGS---LL------INYDTEDTTVV------ISR-DRCPCGRTH--M 321 (445)
T ss_pred CCCcCCCceEEEEEecCCCC-----------ccCCc---eE------EEeecCceEEE------ecC-CCCCCCCCc--c
Confidence 89999999999998743210 00001 11 13999999998 332 379998753 4
Q ss_pred eEEEEcccCCeEEeCCeecChHHHHHHHHHhc---cCcce---eEEEeeC---CeEEEEEEeCCC-chhHhhHHHHHHHH
Q psy14338 1641 AVFVVGALDETIMLRGMRYHPIDIENSVMRAH---KKIAE---CAVFTWT---NLLVVVVELDGN-ESEALDLVPLVTNA 1710 (1761)
Q Consensus 1641 ~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~---p~V~~---a~Vv~~~---~~~~a~v~~~~~-~~~~~~l~~~l~~~ 1710 (1761)
++..+||.||+++++|.+|+|.+||+ +|.++ +++.. +++...+ +.+.+-|+.... ....+++.+.+.+.
T Consensus 322 r~~~~gR~dd~~~~~g~~~~p~~ie~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~~~~~~~~~~~~~~~~~~~ 400 (445)
T TIGR03335 322 RILNPEREAETIWISGVPFNRVDVER-AVFQRENMDSLTGEYEAFLYGEEEGEITLRVSLECEDKDNCSIHDIQENFTGT 400 (445)
T ss_pred eeCCCcccCceEEECCEEeCHHHHHH-HHhccCCCCCCCccEEEEEecCCCCCceEEEEEEecCcccchHHHHHHHHHHH
Confidence 45567999999999999999999999 88885 55532 3332221 244455555322 12223333333322
Q ss_pred H---hhh------cCceeeEEEEECCCCccCCC-chhhhH
Q psy14338 1711 V---LEE------HHLIVGVAVVVDPGVVPINS-RGEKQR 1740 (1761)
Q Consensus 1711 ~---Lp~------~~~vP~~i~~v~~~~lP~t~-~GKvdR 1740 (1761)
. ++. ...+.-.+.+++++.||+++ .||..|
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 401 FLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred HhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 1 110 22345567788888999984 688765
|
This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen. |
| >TIGR03335 F390_ftsA coenzyme F390 synthetase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=278.05 Aligned_cols=328 Identities=15% Similarity=0.091 Sum_probs=220.0
Q ss_pred CCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH---cCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEe
Q psy14338 251 LTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA---CHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYI 327 (1761)
Q Consensus 251 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~ 327 (1761)
...+++++|.|||||||+||+|++||+++.......... .+++++|+++.+.++.++.+.+...+.++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 356789999999999999999999999998776555443 48999999999999999877664345667888876543
Q ss_pred CCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCC--CCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCC
Q psy14338 328 PYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKD--ISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGL 405 (1761)
Q Consensus 328 ~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~--~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~ 405 (1761)
. .....++.|+++++|++..+|+ .+..+........ ....+||.+++| ||+++++..+.+.+.+ |+
T Consensus 163 ~------~~~~~~~~i~~~~~t~l~~~ps-~ll~La~~~~~~g~~~~~~~lr~ii~g--GE~l~~~~r~~ie~~~---g~ 230 (445)
T TIGR03335 163 G------KCTFPIRIIESYRPTGIVASVF-KLLRLARRMKAEGIDPAESSIRRLVVG--GESFADESRNYVEELW---GC 230 (445)
T ss_pred C------chhHHHHHHHHhCCCEEEECHH-HHHHHHHHHHHcCCCcccCcceEEEEc--CCCCCHHHHHHHHHHh---CC
Confidence 3 2345689999999999999865 4444443211111 124689999999 9999999988888888 55
Q ss_pred CCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC--CCcEEEEEeCCCC
Q psy14338 406 RPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM--PGCIMTVVKMDSP 483 (1761)
Q Consensus 406 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~--~~~~~~I~d~~~~ 483 (1761)
+ ++|.||+||+++.+.+.. ..|..+ +...+.|+|+++.
T Consensus 231 ~---v~~~YG~TE~~~~~~c~~-------------------------------------~~g~h~~~d~~~vEIvDp~~~ 270 (445)
T TIGR03335 231 E---VYNTYGSTEGTMCGECQA-------------------------------------VAGLHVPEDLVHLDVYDPRHQ 270 (445)
T ss_pred c---EEecCChhhhhheEEecC-------------------------------------CCCccccCCceEEEEEcCCCC
Confidence 4 999999999864332211 113333 3567999999876
Q ss_pred cccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC-C----Ce----EEEEec
Q psy14338 484 SYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP-G----GL----VFVCGS 554 (1761)
Q Consensus 484 ~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~-d----G~----l~~~GR 554 (1761)
+ ++|.|+.|||++.+-. | . .+.+.+ | --=|||||++++.. + |. +..+||
T Consensus 271 ~-~vp~Ge~GELvvT~L~------~-~-~~r~~~---P----------liRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR 328 (445)
T TIGR03335 271 R-FLPDGECGRIVLTTLL------K-P-GERCGS---L----------LINYDTEDTTVVISRDRCPCGRTHMRILNPER 328 (445)
T ss_pred C-CCcCCCceEEEEEecC------C-C-CccCCc---e----------EEEeecCceEEEecCCCCCCCCCcceeCCCcc
Confidence 4 6899999999998732 1 0 000111 0 11299999999742 2 31 555799
Q ss_pred cCCeEEECCcccChHHHHHHHHhc---CCccccccceE-EEEEEecCCCceEEEEEEeCCC--CCHHHHHHHHHHH-HHH
Q psy14338 555 RDGLMTVTGRKHNADDIIATVLAV---EPMKFIYRGRI-AVFSIRVLRDERICVIAEQRPD--CSEEESFQWMSRV-LQA 627 (1761)
Q Consensus 555 ~d~qvki~G~rIe~~eIE~~l~~~---~~v~~~~~~~a-~v~~~~~~~~~~l~a~v~~~~~--~~~~~l~~~l~~~-Lp~ 627 (1761)
.||++|++|.+|+|.+||++|.+. +.+. .+- +++.........+..-++..+. .+.+++.+.+.+. |..
T Consensus 329 ~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~ 404 (445)
T TIGR03335 329 EAETIWISGVPFNRVDVERAVFQRENMDSLT----GEYEAFLYGEEEGEITLRVSLECEDKDNCSIHDIQENFTGTFLKY 404 (445)
T ss_pred cCceEEECCEEeCHHHHHHHHhccCCCCCCC----ccEEEEEecCCCCCceEEEEEEecCcccchHHHHHHHHHHHHhhh
Confidence 999999999999999999999884 3331 122 2222222223345555555443 2344555555444 222
Q ss_pred hhh------cceeeeeEEEEeCCCCccCCC-CCcccH
Q psy14338 628 VDS------IHQVGLYCLALVPPNYLPKTP-LGGIHL 657 (1761)
Q Consensus 628 y~~------P~~i~~~~v~~v~~~~lP~t~-~GKidR 657 (1761)
+.. -..+. ..+.++....+|+++ .||..|
T Consensus 405 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 405 KPELIGSYDEGIFQ-ILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred hhhhhhhhhcceEE-EEEEEeCCCCccccccCCCcee
Confidence 211 11222 224577888999984 699765
|
This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen. |
| >TIGR03089 conserved hypothetical protein TIGR03089 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=229.74 Aligned_cols=215 Identities=20% Similarity=0.219 Sum_probs=161.8
Q ss_pred HHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCcccc-CCCCCCCEEEEEccCCCchhHHHHHH
Q psy14338 87 IQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSE-SSLKSGDRIALVYPNNDPINFLCAFY 165 (1761)
Q Consensus 87 ~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~-~Gv~~g~~V~l~~~~s~~~~~vva~l 165 (1761)
+..+++++|+++|+++.++.+.+.+++||+||.++++++|+.|+ + .|+++||+|+|+++|+ +++++++|
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~--------~~~Gv~~GdrV~i~~~n~--~~~~~~~~ 71 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQ--------DELDAEPGSRVALDLPAH--WQTAVWLL 71 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHH--------HHhCCCCCCEEEEECCCC--HHHHHHHH
Confidence 46778889999999865322211258999999999999999999 7 6999999999999999 99999999
Q ss_pred HHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceec-----cC----CCcceeE-Ee
Q psy14338 166 GCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAF-----KG----WPKLTWF-VT 235 (1761)
Q Consensus 166 AvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~-~~ 235 (1761)
|++++|++++|++ +++++++|++++....+... ..+..+ .. .....+. ..
T Consensus 72 a~~~~G~v~vp~n------------------~s~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (227)
T TIGR03089 72 AAWSTGVEVVLAG------------------DPDADVVVTGPDRLAAAAGS--GEVVALSLDPLGRRVAGELPPGVIDFA 131 (227)
T ss_pred HHHHcCCEEEeCC------------------CCCCCEEEeCcchhhhcccC--CceEEEeccccccCCCCCCCCcccchh
Confidence 9999999999995 56789999987766554311 111111 00 0000110 01
Q ss_pred ccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHH
Q psy14338 236 EHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
+..........+.+...++|+|.|+||||+ +|++++... ...+++++|+++ .+|++|..|+...++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~ 197 (227)
T TIGR03089 132 PEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLL 197 (227)
T ss_pred hhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHH
Confidence 111111111111213567999999999986 667665544 567899999999 999999999976799
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCce
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRAS 349 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt 349 (1761)
.+|+.|+++++++ +|++..+++.|++++||
T Consensus 198 ~~l~~G~t~v~~~----rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 198 APLAAGGSLVLVT----HPDPARLDQIAETERVT 227 (227)
T ss_pred HHhccCceEEEec----CCCHHHHHHHHHhhcCC
Confidence 9999999999997 89999999999999987
|
This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501. |
| >COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-20 Score=220.99 Aligned_cols=329 Identities=15% Similarity=0.120 Sum_probs=231.0
Q ss_pred CCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc---CcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeC
Q psy14338 1327 TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 1403 (1761)
Q Consensus 1327 ~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~ 1403 (1761)
.-++...|--||||||+|+-+..+...+......+.+.+ +...+|++..+.....+.|.....+++--.|++++=..
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~ 167 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPIS 167 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccC
Confidence 345566688899999999999999998877766665554 67788888776664433333233455555777666554
Q ss_pred CCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhC
Q psy14338 1404 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 1483 (1761)
Q Consensus 1404 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~ 1483 (1761)
+ -+.+.-+++|+++++|++.++|+.+..|.+.+... .....-.+||.+++|+|++++ ...+.+.+.|+
T Consensus 168 ~----g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~-----G~~~~~~~lk~~i~gaE~~se-e~R~~ie~~~g-- 235 (438)
T COG1541 168 G----GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEE-----GIDPDKLSLKKGIFGAEPWSE-EMRKVIENRFG-- 235 (438)
T ss_pred C----ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHc-----CCChhhcceeEEEEecccCCH-HHHHHHHHHhC--
Confidence 3 37788999999999999999999999998865321 112334589999999999999 88888888886
Q ss_pred CCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccccc--CCcEEEEEcCCCCC
Q psy14338 1484 GLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL--PGVKVIIANPETKG 1561 (1761)
Q Consensus 1484 g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~--~~~~~~v~d~~~~~ 1561 (1761)
+..++.||.||..+.. ..+.... -|-.+ +..-+.|+||++++
T Consensus 236 ----~~~~diYGltE~~g~g-----~~eC~~~---------------------------~glhi~eD~~~~Ei~dP~t~e 279 (438)
T COG1541 236 ----CKAFDIYGLTEGFGPG-----AGECTER---------------------------NGLHIWEDHFIFEIVDPETGE 279 (438)
T ss_pred ----CceeeccccccccCCc-----ccccccc---------------------------cCCCcchhhceeeeecCCcCc
Confidence 5779999999964432 0110000 12222 46778999999999
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
.+|.|+.|||.+..-. +.+ . -++ -|||||++++ .++ +|+||+.. ..-
T Consensus 280 ~l~dge~GelV~T~L~--~~~-----~------PlI-----------RYrtgDit~i------~~~--~C~cGr~~-~ri 326 (438)
T COG1541 280 QLPDGERGELVITTLT--KEG-----M------PLI-----------RYRTGDITVI------LSD--PCGCGRTH-RRI 326 (438)
T ss_pred cCCCCCeeEEEEEecc--ccC-----c------ceE-----------EEEcCCeeEe------ccc--CCCCCCcc-ccc
Confidence 9999999999997532 111 1 121 3999999999 666 59998854 223
Q ss_pred EEEEcccCCeEEeCCeecChHHHHHHHHHhccCcc---eeEEEe--eCCeEEEEEEeCCCch---hHhhHHHHHHHHHhh
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIA---ECAVFT--WTNLLVVVVELDGNES---EALDLVPLVTNAVLE 1713 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~---~a~Vv~--~~~~~~a~v~~~~~~~---~~~~l~~~l~~~~Lp 1713 (1761)
..+.||.||+++++|.+|+|..||. ++.+.+.+. +.++.. ..+.+.+-|+..+... ...++...+......
T Consensus 327 ~~I~GR~dD~l~~~G~~vfp~~ie~-~l~~~~~~~~~yqi~~~~~~~~d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~ 405 (438)
T COG1541 327 ERIEGRSDDMLIVRGVNVFPSQIER-VLLQIPEVTPHYQIILTRNGGLDELTVRVELENEAEELEDERRLAKKLIKNIKS 405 (438)
T ss_pred cccCcccccEEEECCEEeCHHHHHH-HHhcccCCCceEEEEEecCCCCceEEEEEEecCcccchHHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999 899999998 455554 2346777777753211 112222333333222
Q ss_pred hcCceeeEEEEECCCCccCCCchhhh
Q psy14338 1714 EHHLIVGVAVVVDPGVVPINSRGEKQ 1739 (1761)
Q Consensus 1714 ~~~~vP~~i~~v~~~~lP~t~~GKvd 1739 (1761)
.--+.-.|.++.++++|+|.. |..
T Consensus 406 -~~~~~~~v~~v~~g~l~r~~~-K~k 429 (438)
T COG1541 406 -ELGVRVEVELVEPGELPRTEG-KAK 429 (438)
T ss_pred -hcCCceEEEEEeccceecccC-cee
Confidence 223455677887789999975 543
|
|
| >TIGR03089 conserved hypothetical protein TIGR03089 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-21 Score=217.93 Aligned_cols=209 Identities=16% Similarity=0.147 Sum_probs=156.1
Q ss_pred cCCCCCCCceEEccCCC-CceeeCHHHHHHHHHHHHHHHHh-hcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCC
Q psy14338 1178 VAGAPVPPGVSSVDTRS-AAQLLTCSQLHKRAERVGALLLE-RAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIR 1255 (1761)
Q Consensus 1178 a~~~P~~~Av~~~d~~~-~~~~lTY~eL~~~a~~lA~~L~~-~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpld 1255 (1761)
++++|+++|+++.+... ++.++||+||.++++++|+.|++ . |+++||+|+|+++|+++++++++|++++|++++|+
T Consensus 6 ~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~-Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~- 83 (227)
T TIGR03089 6 LAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDEL-DAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLA- 83 (227)
T ss_pred hhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHh-CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeC-
Confidence 45789999998643222 35689999999999999999997 7 99999999999999999999999999999999999
Q ss_pred CCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccccc---c------cCCccccCCC-CccchhhhccC-
Q psy14338 1256 PPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDI---K------SWPTILDTDD-MPKKKLAALYR- 1324 (1761)
Q Consensus 1256 p~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~-~~~~~~~~~~~- 1324 (1761)
+ +++++++|++.+.............+.. . .......... ...........
T Consensus 84 -----n-------------~s~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (227)
T TIGR03089 84 -----G-------------DPDADVVVTGPDRLAAAAGSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGDQFAPYE 145 (227)
T ss_pred -----C-------------CCCCCEEEeCcchhhhcccCCceEEEeccccccCCCCCCCCcccchhhhhhccCCCCCCCC
Confidence 2 6889999998877665431111111000 0 0000000000 00000011111
Q ss_pred CCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCC
Q psy14338 1325 APTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 1404 (1761)
Q Consensus 1325 ~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~ 1404 (1761)
...++|++.|+||||+ +|+++.... ...+++++|+++ ..|++|..|+...++.+|..|+|+++++
T Consensus 146 ~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~- 210 (227)
T TIGR03089 146 PPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVT- 210 (227)
T ss_pred CCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEec-
Confidence 3467899999999986 666665544 567889999999 9999999998778999999999999997
Q ss_pred CccccCHHHHHHHHHhcCce
Q psy14338 1405 SEVEVNPALWLSAVSQYRVR 1424 (1761)
Q Consensus 1405 ~~~~~~~~~l~~~i~~~~vt 1424 (1761)
+||+..+++.|+++|||
T Consensus 211 ---rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 211 ---HPDPARLDQIAETERVT 227 (227)
T ss_pred ---CCCHHHHHHHHHhhcCC
Confidence 58999999999999997
|
This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501. |
| >COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-18 Score=203.00 Aligned_cols=322 Identities=16% Similarity=0.181 Sum_probs=222.1
Q ss_pred CCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH---cCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeC
Q psy14338 252 TDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA---CHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIP 328 (1761)
Q Consensus 252 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~ 328 (1761)
.-++..+|--||||||+|+-+..++..+-.....+.+. .+...+|++..+..+....+-....+++--.|++++-.+
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~ 167 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPIS 167 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccC
Confidence 44566678889999999999999999887776666554 478899999888776655443222556666777776655
Q ss_pred CccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCC--CCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCC
Q psy14338 329 YALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK--DISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLR 406 (1761)
Q Consensus 329 ~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~--~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~ 406 (1761)
..+.+.-+++|+++++|++.++|+ .+..+....... ...-.+||.+++| +|+++++..+.+.+.+ |+.
T Consensus 168 ----~g~~~~~~~l~~df~~tvI~~tps-~~l~lae~~~~~G~~~~~~~lk~~i~g--aE~~see~R~~ie~~~---g~~ 237 (438)
T COG1541 168 ----GGNTERQLELMKDFKPTVIAATPS-YLLYLAEEAEEEGIDPDKLSLKKGIFG--AEPWSEEMRKVIENRF---GCK 237 (438)
T ss_pred ----CccHHHHHHHHHhcCCcEEEEChH-HHHHHHHHHHHcCCChhhcceeEEEEe--cccCCHHHHHHHHHHh---CCc
Confidence 346788899999999999999975 555554433222 2334689999999 9999999999999999 665
Q ss_pred CCccccccccccccceE-eecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC--CCcEEEEEeCCCC
Q psy14338 407 PDAICPCASSSECLTVS-VRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM--PGCIMTVVKMDSP 483 (1761)
Q Consensus 407 ~~~l~n~YG~TE~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~--~~~~~~I~d~~~~ 483 (1761)
.++.||.||..+.. .-... .. |-.+ .+.-+.|+||+..
T Consensus 238 ---~~diYGltE~~g~g~~eC~~-----------------------------------~~-glhi~eD~~~~Ei~dP~t~ 278 (438)
T COG1541 238 ---AFDIYGLTEGFGPGAGECTE-----------------------------------RN-GLHIWEDHFIFEIVDPETG 278 (438)
T ss_pred ---eeeccccccccCCccccccc-----------------------------------cc-CCCcchhhceeeeecCCcC
Confidence 79999999986442 11110 00 2222 3566889998776
Q ss_pred cccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCC----Ce-----EEEEec
Q psy14338 484 SYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPG----GL-----VFVCGS 554 (1761)
Q Consensus 484 ~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~d----G~-----l~~~GR 554 (1761)
+ .+|.|+.|||++.. +|.+.+ | --=|||||++++.++ |. ..+.||
T Consensus 279 e-~l~dge~GelV~T~------------L~~~~~---P----------lIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR 332 (438)
T COG1541 279 E-QLPDGERGELVITT------------LTKEGM---P----------LIRYRTGDITVILSDPCGCGRTHRRIERIEGR 332 (438)
T ss_pred c-cCCCCCeeEEEEEe------------ccccCc---c----------eEEEEcCCeeEecccCCCCCCccccccccCcc
Confidence 5 69999999999976 222222 1 123999999999762 32 578999
Q ss_pred cCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCC-CHHHHH---HHHHHHHHHhhh
Q psy14338 555 RDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC-SEEESF---QWMSRVLQAVDS 630 (1761)
Q Consensus 555 ~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~-~~~~l~---~~l~~~Lp~y~~ 630 (1761)
.||+++++|.+|.|..||..|.+.+.+. .+--++.......+.+.+-++..++. .....+ ..+.+.+-.. .
T Consensus 333 ~dD~l~~~G~~vfp~~ie~~l~~~~~~~----~~yqi~~~~~~~~d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~-~ 407 (438)
T COG1541 333 SDDMLIVRGVNVFPSQIERVLLQIPEVT----PHYQIILTRNGGLDELTVRVELENEAEELEDERRLAKKLIKNIKSE-L 407 (438)
T ss_pred cccEEEECCEEeCHHHHHHHHhcccCCC----ceEEEEEecCCCCceEEEEEEecCcccchHHHHHHHHHHHHHHHhh-c
Confidence 9999999999999999999999988772 13333333344456677777776531 112222 2333222221 1
Q ss_pred cceeeeeEEEEeCCCCccCCCCCcccH
Q psy14338 631 IHQVGLYCLALVPPNYLPKTPLGGIHL 657 (1761)
Q Consensus 631 P~~i~~~~v~~v~~~~lP~t~~GKidR 657 (1761)
...+ .+.|+.+.++|+|.. |..|
T Consensus 408 ~~~~---~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 408 GVRV---EVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred CCce---EEEEEeccceecccC-ceeE
Confidence 1111 236788899999975 6543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-17 Score=198.32 Aligned_cols=115 Identities=12% Similarity=0.123 Sum_probs=104.5
Q ss_pred CCceEeecceEEE-eCCCeEEEEeccCCeEEECC---cccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEE
Q psy14338 531 QDTYTRSGLLGFL-GPGGLVFVCGSRDGLMTVTG---RKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVI 605 (1761)
Q Consensus 531 ~~~~yrTGDl~~~-~~dG~l~~~GR~d~qvki~G---~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~ 605 (1761)
.+|||+|||+|++ |+||+|+|+||.| +| ++|+|. ||++|.++++| .+|+|+++++ ..++.++||
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V-----~eaaVvgvpd~~~ge~v~A~ 275 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAV-----SDVAIALFSLPAKGVGLYAF 275 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCc-----cEEEEEEEEcCCCCeEEEEE
Confidence 3799999999998 6999999999998 88 799999 99999999988 7999999995 478899999
Q ss_pred EEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHH
Q psy14338 606 AEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664 (1761)
Q Consensus 606 v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~ 664 (1761)
|++....+.++++++|+++||. |+|..+ ..+++||+|+|||++|++|++..
T Consensus 276 Vv~~~~~~~~el~~~l~~~L~~-kvP~~v-------~~v~~lP~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 276 VEAELPADEKSLRARLAGAKPP-KPPEHI-------QPVAALPRDADGTVRDDILRLIA 326 (365)
T ss_pred EEECCCCCHHHHHHHHHhhchh-cCCcEE-------EEECCCCCCCCCCccHHHHHHHh
Confidence 9987667889999999999999 999986 44599999999999999999865
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.2e-17 Score=192.23 Aligned_cols=112 Identities=14% Similarity=0.072 Sum_probs=100.6
Q ss_pred CCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCC---eecChHHHHHHHHHhccCcceeEEEe
Q psy14338 1606 GELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRG---MRYHPIDIENSVMRAHKKIAECAVFT 1682 (1761)
Q Consensus 1606 ~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G---~rI~~~eIE~~~l~~~p~V~~a~Vv~ 1682 (1761)
.+|||+|||+|++. |+| |+ |+|.||.| +| +||+|. ||+ +|.+||+|.+|+|++
T Consensus 207 ~dgW~~TGDlg~~~-----d~d--------G~----l~~~gR~~-----~G~~i~nV~p~-IE~-~L~~hp~V~eaaVvg 262 (365)
T PRK09188 207 SRIWLATGKKVYNF-----ITR--------GL----FSWSDGEG-----TGDRIDNEAPA-IQA-ALKSDPAVSDVAIAL 262 (365)
T ss_pred cCcEEeCCCEEEEE-----cCC--------Ce----EEEEecCc-----CCcCceeeCHH-HHH-HHHhCCCccEEEEEE
Confidence 67999999999972 488 99 99999998 88 799999 999 899999999999998
Q ss_pred e-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHH
Q psy14338 1683 W-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1683 ~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~ 1747 (1761)
. ++.++|||+... ..+.++++++|+++ |+ . |+|+.|.+++ +||+|+|||++|++|++..
T Consensus 263 vpd~~~ge~v~A~Vv~~~-~~~~~el~~~l~~~-L~-~-kvP~~v~~v~--~lP~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 263 FSLPAKGVGLYAFVEAEL-PADEKSLRARLAGA-KP-P-KPPEHIQPVA--ALPRDADGTVRDDILRLIA 326 (365)
T ss_pred EEcCCCCeEEEEEEEECC-CCCHHHHHHHHHhh-ch-h-cCCcEEEEEC--CCCCCCCCCccHHHHHHHh
Confidence 4 568899998753 45678999999997 98 7 9999999999 9999999999999999876
|
|
| >TIGR02304 aden_form_hyp probable adenylate-forming enzyme | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.4e-13 Score=162.46 Aligned_cols=266 Identities=13% Similarity=0.080 Sum_probs=165.8
Q ss_pred EEEEEeccCCCCCCceEEccHHHHHHHHHHH-HHH--cCcCCCCeEEEEeCCccChhHHHHHHHHhhcCce-EEEeCCCc
Q psy14338 1331 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM-KLA--CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHH-SILIPPSE 1406 (1761)
Q Consensus 1331 ~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~-~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~-~vl~~~~~ 1406 (1761)
-..+..||||||+|=.+..+........... ... .++..++++.....- .+ .++..+.+... +-.. +
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~---~~---~ly~~~~~~~~~~~~~---~ 171 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRA---DN---NLYQSVNNRWISLDFF---D 171 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEcc---Ch---hHHHHHHhccceeeec---C
Confidence 3467789999999999999998764433222 111 245555555544211 11 12222222211 1222 2
Q ss_pred cccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCC
Q psy14338 1407 VEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLS 1486 (1761)
Q Consensus 1407 ~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~ 1486 (1761)
+..+.+.+++.|++++++++.+.|+.+..|++...+ ...+ .+++.++++||.+++ ...+.+.+.|+
T Consensus 172 l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~-------~~l~-~~~k~ii~~~E~l~~-~~r~~Ie~~fg----- 237 (430)
T TIGR02304 172 LLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVME-------GELT-IKPKKVISVAEVLEP-QDRELIRNVFK----- 237 (430)
T ss_pred CCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHh-------cCCC-CCceEEEEccCCCCH-HHHHHHHHHhC-----
Confidence 235788999999999999999999999999875321 1222 368999999999998 67677788875
Q ss_pred CccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCC
Q psy14338 1487 PRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDS 1566 (1761)
Q Consensus 1487 e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G 1566 (1761)
+.+++.||+|| +.++.... ....... .+ .--+|..++|++ ++++
T Consensus 238 -~~V~~~YG~tE-g~la~eC~----~g~lHl~-----ed---------------------~~~vE~~ivD~~-~~~~--- 281 (430)
T TIGR02304 238 -NTVHQIYQATE-GFLASTCR----CGTLHLN-----ED---------------------LVHIEKQYLDEH-KRFV--- 281 (430)
T ss_pred -CCeeEccCCch-hheEEecC----CCCEEEc-----cc---------------------cEEEEeeEECCC-CceE---
Confidence 67999999999 44432221 1111110 00 001334477865 3322
Q ss_pred cceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceE-EEE
Q psy14338 1567 HLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAV-FVV 1645 (1761)
Q Consensus 1567 ~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l-~~~ 1645 (1761)
. |..++.| ...-++ =|+|||++++ .++ ||+||... ..| .+.
T Consensus 282 ----~------ViT~L~n-------~~~PlI-----------RYrtGD~~~~------~~~--~C~CGr~~--~~i~~I~ 323 (430)
T TIGR02304 282 ----P------IITDFTR-------TTQPIV-----------RYRLNDILVE------SEQ--PCSCGSAT--MAIERIE 323 (430)
T ss_pred ----E------EEecCCC-------ccceEE-----------eeeCCCEEEe------CCC--CCCCCCcc--cccCCcc
Confidence 2 3344443 111121 3999999999 555 89998854 345 388
Q ss_pred cccCCeEEe---CC--eecChHHHHHHHHHhccCcceeEEEee-CCeEEEEEEe
Q psy14338 1646 GALDETIML---RG--MRYHPIDIENSVMRAHKKIAECAVFTW-TNLLVVVVEL 1693 (1761)
Q Consensus 1646 GR~dd~Iki---~G--~rI~~~eIE~~~l~~~p~V~~a~Vv~~-~~~~~a~v~~ 1693 (1761)
||.||++++ +| .+|+|..|+..++...++|.+.-++.. .+.+...++.
T Consensus 324 GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~~~~l~v~~~~ 377 (430)
T TIGR02304 324 GRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTGSAQLELIADC 377 (430)
T ss_pred CccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEccCCeEEEEEEe
Confidence 999999996 34 556999999834666889988766653 3455555544
|
Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase. |
| >TIGR02304 aden_form_hyp probable adenylate-forming enzyme | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.8e-10 Score=136.67 Aligned_cols=258 Identities=11% Similarity=0.078 Sum_probs=152.8
Q ss_pred cEEEEecCCCCCCceEEEEchHHHHHHHHHHH-H--HcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcE-EEEeCCcc
Q psy14338 256 PAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT-Q--ACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMH-AVYIPYAL 331 (1761)
Q Consensus 256 ~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~-~--~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~-lvi~~~~~ 331 (1761)
-..+.-||||||+|=.+.++............ . ..++..++++..+.--. .. ++.++.+... +-..+ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~--~~----ly~~~~~~~~~~~~~~--l 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRAD--NN----LYQSVNNRWISLDFFD--L 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccC--hh----HHHHHHhccceeeecC--C
Confidence 34677799999999999999987644332221 1 12556667766552100 01 2233322221 22222 1
Q ss_pred ccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccc
Q psy14338 332 MKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAIC 411 (1761)
Q Consensus 332 ~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~ 411 (1761)
..+.+.+++.|++++++++...|+ .+..|.........+ .++|.++++ ||++++...+.+.+.| |++ ++
T Consensus 173 -~~~~~~~l~~L~~~~P~~L~g~pS-~l~~LA~~~~~~~l~-~~~k~ii~~--~E~l~~~~r~~Ie~~f---g~~---V~ 241 (430)
T TIGR02304 173 -LAPFQAHIKRLNQRKPSIIVAPPS-VLRALALEVMEGELT-IKPKKVISV--AEVLEPQDRELIRNVF---KNT---VH 241 (430)
T ss_pred -CcCHHHHHHHHHHhCCCEEEEcHH-HHHHHHHHHHhcCCC-CCceEEEEc--cCCCCHHHHHHHHHHh---CCC---ee
Confidence 356889999999999999999864 666665532222222 468999999 9999999888889998 554 99
Q ss_pred cccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCC
Q psy14338 412 PCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDE 491 (1761)
Q Consensus 412 n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~ 491 (1761)
+.||.|| +.++..... +..++..+. --++..++|++++
T Consensus 242 ~~YG~tE-g~la~eC~~-------------------g~lHl~ed~--------------~~vE~~ivD~~~~-------- 279 (430)
T TIGR02304 242 QIYQATE-GFLASTCRC-------------------GTLHLNEDL--------------VHIEKQYLDEHKR-------- 279 (430)
T ss_pred EccCCch-hheEEecCC-------------------CCEEEcccc--------------EEEEeeEECCCCc--------
Confidence 9999999 444332111 001111110 0122337787653
Q ss_pred ceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCC----Ce----E-EEEeccCCeEEE-
Q psy14338 492 VGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPG----GL----V-FVCGSRDGLMTV- 561 (1761)
Q Consensus 492 ~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~d----G~----l-~~~GR~d~qvki- 561 (1761)
++.+|.+ +.| ..+ |+ -=|+|||++++.++ |. | .+.||.||++++
T Consensus 280 -~~~ViT~------L~n------~~~---Pl----------IRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~ 333 (430)
T TIGR02304 280 -FVPIITD------FTR------TTQ---PI----------VRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLI 333 (430)
T ss_pred -eEEEEec------CCC------ccc---eE----------EeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEe
Confidence 2234433 222 111 11 12999999998543 42 4 488999999996
Q ss_pred --CCc--ccChHHHHHHHHhc-CCccccccceEEEEEEecCCCceEEEEEEe
Q psy14338 562 --TGR--KHNADDIIATVLAV-EPMKFIYRGRIAVFSIRVLRDERICVIAEQ 608 (1761)
Q Consensus 562 --~G~--rIe~~eIE~~l~~~-~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~ 608 (1761)
+|. .|.|..++..+... +.+ .+.-++.. ..+.+...+++
T Consensus 334 ~~~G~~v~v~p~~~~~~i~~~~~~i-----~~yQi~Q~---~~~~l~v~~~~ 377 (430)
T TIGR02304 334 TRSGDEQTVFPDFIRRVILFTLPLI-----VEYRVLQT---GSAQLELIADC 377 (430)
T ss_pred cCCCCeEEeCHHHHHHHHHhcCCCC-----ceEEEEEc---cCCeEEEEEEe
Confidence 254 45899998876653 444 34433332 33455555554
|
Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase. |
| >PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.2e-09 Score=99.69 Aligned_cols=71 Identities=21% Similarity=0.230 Sum_probs=60.1
Q ss_pred HHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCC-c
Q psy14338 570 DIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNY-L 647 (1761)
Q Consensus 570 eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~-l 647 (1761)
|||++|.++++| .+|+|++.++ ..|+.++||+++ +.++++++++++||.||+|+.+ .|+.+++ |
T Consensus 1 EIE~~l~~~~~V-----~~~~V~~~~d~~~g~~l~a~vv~----~~~~i~~~~~~~l~~~~~P~~~-----~~v~~~~~l 66 (73)
T PF13193_consen 1 EIESVLRQHPGV-----AEAAVVGVPDEDWGERLVAFVVL----DEEEIRDHLRDKLPPYMVPRRI-----RFVRLDEEL 66 (73)
T ss_dssp HHHHHHHTSTTE-----EEEEEEEEEETTTEEEEEEEEEE----HHHHHHHHHHHHS-GGGS-SEE-----EEEEESSSE
T ss_pred CHHHHHhcCCCc-----cEEEEEEEEcccccccceeEEEe----eecccccchhhhCCCcceeeEE-----EEccccCcC
Confidence 899999999988 7999999995 467899999998 5599999999999999999543 3566688 9
Q ss_pred cCCCCCc
Q psy14338 648 PKTPLGG 654 (1761)
Q Consensus 648 P~t~~GK 654 (1761)
|+|+|||
T Consensus 67 P~t~~GK 73 (73)
T PF13193_consen 67 PRTPSGK 73 (73)
T ss_dssp EBETTSS
T ss_pred CCCCCCC
Confidence 9999999
|
... |
| >PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.5e-09 Score=96.49 Aligned_cols=65 Identities=28% Similarity=0.360 Sum_probs=55.4
Q ss_pred HHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCcee--eEEEEECCCC-ccCCC
Q psy14338 1663 DIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIV--GVAVVVDPGV-VPINS 1734 (1761)
Q Consensus 1663 eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP--~~i~~v~~~~-lP~t~ 1734 (1761)
|||+ ++.+||+|.+|+|++. |+.++|||+. +.++|+++++++ || .||+| ..++.++ + ||+|+
T Consensus 1 EIE~-~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~-----~~~~i~~~~~~~-l~-~~~~P~~~~~v~~~--~~lP~t~ 70 (73)
T PF13193_consen 1 EIES-VLRQHPGVAEAAVVGVPDEDWGERLVAFVVL-----DEEEIRDHLRDK-LP-PYMVPRRIRFVRLD--EELPRTP 70 (73)
T ss_dssp HHHH-HHHTSTTEEEEEEEEEEETTTEEEEEEEEEE-----HHHHHHHHHHHH-S--GGGS-SEEEEEEES--SSEEBET
T ss_pred CHHH-HHhcCCCccEEEEEEEEcccccccceeEEEe-----eecccccchhhh-CC-CcceeeEEEEcccc--CcCCCCC
Confidence 8999 8999999999999984 3588999987 458999999997 98 99999 6677778 6 99999
Q ss_pred chh
Q psy14338 1735 RGE 1737 (1761)
Q Consensus 1735 ~GK 1737 (1761)
|||
T Consensus 71 ~GK 73 (73)
T PF13193_consen 71 SGK 73 (73)
T ss_dssp TSS
T ss_pred CCC
Confidence 998
|
... |
| >PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.1e-06 Score=100.68 Aligned_cols=250 Identities=17% Similarity=0.099 Sum_probs=140.6
Q ss_pred CCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcC----cCCCCeEEEE-eCCcc---ChhHH-HHHHHHhhcCc
Q psy14338 1327 TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE----LYPSRHIALC-LDPYC---GLGFA-LWVLSSVYSGH 1397 (1761)
Q Consensus 1327 ~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~----~~~~d~~~~~-~~~~~---~~~~~-~~~~~~L~~G~ 1397 (1761)
.++++..++-||||||.|--+.+.+..+......+...++ .......++. .|... .++.. ...+..+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 4566778899999999986677777666665544443332 2221122222 23221 12111 12233344455
Q ss_pred eEEEeCCCccccCHHHHHHHHH----hcCceEeecchHHHHHHHhhhcCCcchhhccCCCCC-cceEEEeec------CC
Q psy14338 1398 HSILIPPSEVEVNPALWLSAVS----QYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALG-CVRTCVVVA------EE 1466 (1761)
Q Consensus 1398 ~~vl~~~~~~~~~~~~l~~~i~----~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~-~Lr~v~~gG------e~ 1466 (1761)
. ....+. .+|.+.+...+. +.+...++..|.++-.++..+++ ......++ ..+.+-.|| |.
T Consensus 167 ~-~~l~~~--~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~-----~~~~~~L~~~s~vi~~GGwK~~~~e~ 238 (365)
T PF04443_consen 167 R-FALDND--ELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEE-----RGIRFRLPKGSIVIHGGGWKGRRKEA 238 (365)
T ss_pred e-eeecCC--ccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHh-----cCCcccCCCCCEEEeCCCCCccccCc
Confidence 5 555443 367777776664 45677788888866666554422 11223343 344444443 34
Q ss_pred CChHHHHHHHHHHHhhCCC-CCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccc-
Q psy14338 1467 RPRIHLTSAFSKLFSALGL-SPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESG- 1544 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~~g~-~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG- 1544 (1761)
++++++.+.+.+.| |. ....+++.||+||........ . -|
T Consensus 239 v~r~ef~~~l~~~~---Gv~~~~~i~~~ygmtEl~s~~~~~-------------~----------------------~~~ 280 (365)
T PF04443_consen 239 VSREEFYARLQEVF---GVIPIENIYDMYGMTELNSQAYEC-------------G----------------------HGH 280 (365)
T ss_pred cCHHHHHHHHHHHH---CCCCHHHeeeeeeccccchhheeC-------------C----------------------CCc
Confidence 55555555555544 55 557899999999953211100 0 01
Q ss_pred cccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCC
Q psy14338 1545 KLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPA 1624 (1761)
Q Consensus 1545 ~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~ 1624 (1761)
.++|-. +.|.|+++.+++|.|+.|-|-+=.+... .|. +..-|.|+|.++
T Consensus 281 ~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~-s~p------------------------~~IlTeDlGvl~----- 329 (365)
T PF04443_consen 281 FHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANT-SYP------------------------GFILTEDLGVLH----- 329 (365)
T ss_pred ccCCCe-EEEECCCCCcCCCCCCeeEEEEEccccc-CCC------------------------cEEEEcceeeec-----
Confidence 122333 7788999999999999999988665422 222 236699999884
Q ss_pred CCCCCCCCCCCCcccceEEEEcccCCeEEeCCeec
Q psy14338 1625 GVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRY 1659 (1761)
Q Consensus 1625 d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI 1659 (1761)
+.+ .|+| + +...++++||.+. -.+||-..
T Consensus 330 ~~~--~c~c-r--~g~~f~vlGR~~~-ae~RGCs~ 358 (365)
T PF04443_consen 330 GDD--DCGC-R--KGKYFEVLGRADG-AEIRGCSL 358 (365)
T ss_pred CCC--CCCC-c--cCCEEEEEeCCCC-CccCCcHH
Confidence 222 2322 2 2234999999874 34555443
|
LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence |
| >PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.7e-05 Score=95.54 Aligned_cols=241 Identities=12% Similarity=0.105 Sum_probs=134.8
Q ss_pred CCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc---CCCCC--CeEEEccCCcch-----hhhHHHHHHHHhcC
Q psy14338 252 TDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC---HYTEG--ENMVCVLDFKRE-----TGLWHSVLTSVLNG 321 (1761)
Q Consensus 252 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~--d~~l~~~~~~~~-----~~~~~~i~~~L~~G 321 (1761)
.++++..++-||||||.|--+.+.+..+..........+ ..... -.++...|-... +... .+...+..+
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~-~~~~~~~~~ 165 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYA-GILGELFFG 165 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHH-HHHhhcccC
Confidence 355677888899999998667777666665554444332 22111 223333343221 1111 233344455
Q ss_pred cEEEEeCCccccCCHHHHHHHHH----hcCceEEEecCHHHHHHhhcCCCCC--CCCCC-ceeEEEecC----CCccCCH
Q psy14338 322 MHAVYIPYALMKVNPASWMQMIT----KYRASVAVVKSRDLHWGLLATKDHK--DISLS-SLRLLLVGD----GANPWSL 390 (1761)
Q Consensus 322 ~~lvi~~~~~~~~~~~~l~~~i~----~~~vt~~~~~p~~~~~~ll~~~~~~--~~~l~-~Lr~v~~gg----~Ge~l~~ 390 (1761)
.. ...... .+|.+.+.+.+. +.+...++..| .+++.++...... ...++ ..+.+-.|| .++.++.
T Consensus 166 ~~-~~l~~~--~ld~~~~~~~L~~~~~~~~pv~l~Gft-f~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r 241 (365)
T PF04443_consen 166 SR-FALDND--ELDLEGLIEALFRAEHSGEPVLLFGFT-FFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSR 241 (365)
T ss_pred ce-eeecCC--ccCHHHHHHHHHHHHhCCCCEEEECch-HHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCH
Confidence 55 444422 467777666654 44566677664 3555554322111 22333 344444443 1356764
Q ss_pred -HHHHHHHHHhhhCCC-CCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 391 -SSCDQFLSVFQSKGL-RPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 391 -~~~~~~~~~~~~~g~-~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
+..+.+.+.+ |+ +...+++.||+||........... . .
T Consensus 242 ~ef~~~l~~~~---Gv~~~~~i~~~ygmtEl~s~~~~~~~~-------------------------------~------~ 281 (365)
T PF04443_consen 242 EEFYARLQEVF---GVIPIENIYDMYGMTELNSQAYECGHG-------------------------------H------F 281 (365)
T ss_pred HHHHHHHHHHH---CCCCHHHeeeeeeccccchhheeCCCC-------------------------------c------c
Confidence 4444555667 77 556799999999976433211100 0 1
Q ss_pred CCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCC--
Q psy14338 469 VMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPG-- 546 (1761)
Q Consensus 469 p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~d-- 546 (1761)
++|-. +.|.|++.- .+||.|+.|=|-+=.+.-. .| -+..-|.|+|.+..+
T Consensus 282 ~~p~w-V~iRDp~tl-~~~~~Ge~Gli~vidl~~~-s~-------------------------p~~IlTeDlGvl~~~~~ 333 (365)
T PF04443_consen 282 HVPPW-VIIRDPETL-EPLPPGETGLIQVIDLANT-SY-------------------------PGFILTEDLGVLHGDDD 333 (365)
T ss_pred cCCCe-EEEECCCCC-cCCCCCCeeEEEEEccccc-CC-------------------------CcEEEEcceeeecCCCC
Confidence 22222 777788764 4799999999988654211 11 234669999988654
Q ss_pred ------CeEEEEeccCCeEEECCccc
Q psy14338 547 ------GLVFVCGSRDGLMTVTGRKH 566 (1761)
Q Consensus 547 ------G~l~~~GR~d~qvki~G~rI 566 (1761)
.+++++||.+.- .+||-..
T Consensus 334 c~cr~g~~f~vlGR~~~a-e~RGCs~ 358 (365)
T PF04443_consen 334 CGCRKGKYFEVLGRADGA-EIRGCSL 358 (365)
T ss_pred CCCccCCEEEEEeCCCCC-ccCCcHH
Confidence 279999998753 4556444
|
LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence |
| >PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.3e-05 Score=102.22 Aligned_cols=300 Identities=10% Similarity=0.049 Sum_probs=143.0
Q ss_pred CCCCCCcEEEEecCCCCCC-ceEEEEchHHHHHHH--HHH-------HHHcCCC-CCCe--EEEcc---CCcch-hhhHH
Q psy14338 250 RLTDDTPAYIEYTTDRDGS-VMGVTVTRAAMLSHC--RAL-------TQACHYT-EGEN--MVCVL---DFKRE-TGLWH 312 (1761)
Q Consensus 250 ~~~~~~~a~ii~TSGSTG~-PKgV~~th~~l~~~~--~~~-------~~~~~~~-~~d~--~l~~~---~~~~~-~~~~~ 312 (1761)
...++.+.+..-||||||. ||-+.+|...+.... ... ...++.. ...+ ++.+. +.... .|+-.
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~ 155 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPI 155 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EE
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEE
Confidence 4567778899999999999 999999999876533 111 1122222 1222 44443 11100 11100
Q ss_pred HHHHHHhcC-------cEEEEeCCccc-cCC-HH----HHHHHH-HhcCceEEEecCHHHHHHhhcCCC-----C-----
Q psy14338 313 SVLTSVLNG-------MHAVYIPYALM-KVN-PA----SWMQMI-TKYRASVAVVKSRDLHWGLLATKD-----H----- 368 (1761)
Q Consensus 313 ~i~~~L~~G-------~~lvi~~~~~~-~~~-~~----~l~~~i-~~~~vt~~~~~p~~~~~~ll~~~~-----~----- 368 (1761)
+-..++... ...+.+. +.+ ..+ -+ .++..+ ++..++.+...+|+++..++...+ .
T Consensus 156 g~~s~~~~~~~~~~~~~~~~~P~-~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~ 234 (528)
T PF03321_consen 156 GSISGIPYRMIPPWFRSWFTSPS-EVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIR 234 (528)
T ss_dssp E-HHHHHHT--SCCHHG-BSS-H-HHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccchhhChHHHccCccCCH-HHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhc
Confidence 011111111 1111121 111 111 11 223333 388999999988866654433210 0
Q ss_pred ---------------------------CCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccc
Q psy14338 369 ---------------------------KDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLT 421 (1761)
Q Consensus 369 ---------------------------~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~ 421 (1761)
...-.|.|+++.+-++|.. ..-++++++.++. ++ .+..+|+.||+-+
T Consensus 235 ~G~~~~~~p~p~rA~~L~~~~~~~~~~~~~lWP~L~~v~~~~~g~~--~~y~~~l~~~~g~--~~--~~~~~y~ASEg~i 308 (528)
T PF03321_consen 235 DGTLSLLRPNPERAAELRAEFEKGRGIPKRLWPNLKLVSCWGGGSM--APYAPKLREYFGG--VP--IQSKGYGASEGFI 308 (528)
T ss_dssp HTS--C-S--HHHHHHHHHHHCCSTTHHHHHSTT--EEEEE-SGGG--GGGHHHHHHHHTT--S---EEE-EEEETTEEE
T ss_pred CCccccCCCCHHHHHHHHHhhcccCCCHHHhCCCCcEEEEEcCCCh--HHHHHHHHHHcCC--Cc--eeeccccccceEE
Confidence 0112578996655432332 3556677777753 22 3668999999743
Q ss_pred eEeec-CCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecC
Q psy14338 422 VSVRR-PGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAST 500 (1761)
Q Consensus 422 ~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~ 500 (1761)
+... +... +. ...+..+...+-+.+.... + +.++.++.-++ .+..|+.-||+|...
T Consensus 309 -~i~~~~~~~-----~~----~l~~~~~ffEFip~~~~~~----~---~~~~~~~l~~~------ele~G~~YelviTt~ 365 (528)
T PF03321_consen 309 -GIPLDPEDP-----GY----VLAPDSGFFEFIPVDEDEQ----N---PSEQPKTLLLH------ELEVGEEYELVITTN 365 (528)
T ss_dssp -EEES-CCC-------E----EE-TTSSEEEEEE-STT--------------SSSEEGG------G--TT-EEEEEEEST
T ss_pred -EEecCCCCC-----ce----EeecCCeEEEEEeccCCcc----c---ccCCCceecHH------HhcCCCeEEEEEecc
Confidence 3322 1110 00 0001111111111111000 0 00111111111 267889999999764
Q ss_pred CccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC--CC--eEEEEeccCCeEEECCcccChHHHHHHHH
Q psy14338 501 GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP--GG--LVFVCGSRDGLMTVTGRKHNADDIIATVL 576 (1761)
Q Consensus 501 ~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~--dG--~l~~~GR~d~qvki~G~rIe~~eIE~~l~ 576 (1761)
+ |.|. ||.||+++... ++ .|+|+||.+..+.+.|+++.-.+|+.++.
T Consensus 366 ~---GLyR--------------------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~ 416 (528)
T PF03321_consen 366 S---GLYR--------------------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVA 416 (528)
T ss_dssp T---S-SS--------------------------EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHH
T ss_pred c---ceee--------------------------eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHH
Confidence 2 3332 99999999863 55 79999999999999999999999999998
Q ss_pred hc---CCccccccceEEEEEEe-cCCCceEEEEEEeCCC
Q psy14338 577 AV---EPMKFIYRGRIAVFSIR-VLRDERICVIAEQRPD 611 (1761)
Q Consensus 577 ~~---~~v~~~~~~~a~v~~~~-~~~~~~l~a~v~~~~~ 611 (1761)
+. .++ ...+-.+.... .....+.+.|++....
T Consensus 417 ~~~~~~~~---~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 417 RALQETGL---ELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp HHHHCTT----EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred HHHHhcCC---ceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 76 222 11344444332 2344566777777655
|
The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A. |
| >PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00024 Score=90.75 Aligned_cols=102 Identities=16% Similarity=0.193 Sum_probs=62.8
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCccc--
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLH-- 1639 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~-- 1639 (1761)
.+..|+.-||.|+.. .|.|. |+.||+++.. |+.+
T Consensus 351 ele~G~~YelviTt~---~GLyR-------------------------Y~iGDvVrv~----------------gf~~~~ 386 (528)
T PF03321_consen 351 ELEVGEEYELVITTN---SGLYR-------------------------YRIGDVVRVT----------------GFYNQT 386 (528)
T ss_dssp G--TT-EEEEEEEST---TS-SS-------------------------EEECEEEEEE----------------EEETTE
T ss_pred HhcCCCeEEEEEecc---cceee-------------------------eecCCEEEEe----------------eccCCC
Confidence 467788899999764 45564 9999999993 3322
Q ss_pred ceEEEEcccCCeEEeCCeecChHHHHHHHHHhc-----cCcceeEEEee---CC--eEEEEEEeCCCchhHhhHHHHHH
Q psy14338 1640 DAVFVVGALDETIMLRGMRYHPIDIENSVMRAH-----KKIAECAVFTW---TN--LLVVVVELDGNESEALDLVPLVT 1708 (1761)
Q Consensus 1640 ~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~-----p~V~~a~Vv~~---~~--~~~a~v~~~~~~~~~~~l~~~l~ 1708 (1761)
+.++|+||.+.++.+.|+++.-.+|+. ++... -.+.+-.+... ++ .-+.+++......+.+.+.+.+.
T Consensus 387 P~i~F~~R~~~~l~l~gEkl~e~~v~~-av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~~~~~~~~~~~lD 464 (528)
T PF03321_consen 387 PRIEFVGRRGQVLSLFGEKLSEEQVQE-AVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGEPDDLEELAKALD 464 (528)
T ss_dssp EEEEEEEETTEEE-SSS--EEHHHHHH-HHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-HHHHHHHHHHHH
T ss_pred cEEEEeccCCceeecceeecCHHHHHH-HHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCCchHHHHHHHHHH
Confidence 369999999999999999999999999 45443 23344444433 22 55666666555333444444443
|
The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A. |
| >PLN02249 indole-3-acetic acid-amido synthetase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.011 Score=75.82 Aligned_cols=62 Identities=11% Similarity=0.124 Sum_probs=50.5
Q ss_pred CCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC----CCeEEEEeccCCeEEEC
Q psy14338 487 CKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP----GGLVFVCGSRDGLMTVT 562 (1761)
Q Consensus 487 ~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~----dG~l~~~GR~d~qvki~ 562 (1761)
|..|+.-||+|...+ |.| =|+.||+++... -=.|.|+||.+..+.+.
T Consensus 391 Ve~G~~Y~lVvTT~~---GLy--------------------------RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~ 441 (597)
T PLN02249 391 VEVGKEYELVITTYA---GLY--------------------------RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIE 441 (597)
T ss_pred cCCCCeEEEEEEccc---cee--------------------------EeecCCEEEEeeccCCCcEEEEEccCCcceecc
Confidence 678889999997531 222 189999999863 22599999999999999
Q ss_pred CcccChHHHHHHHHh
Q psy14338 563 GRKHNADDIIATVLA 577 (1761)
Q Consensus 563 G~rIe~~eIE~~l~~ 577 (1761)
|+++.-.+++.++.+
T Consensus 442 GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 442 SDKTDEADLQKAVEN 456 (597)
T ss_pred cccCCHHHHHHHHHH
Confidence 999999999998876
|
|
| >PLN02249 indole-3-acetic acid-amido synthetase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0052 Score=78.73 Aligned_cols=66 Identities=8% Similarity=0.080 Sum_probs=53.1
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcc--
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKL-- 1638 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~-- 1638 (1761)
..|..|+.-||.|+.. .|-|. |+.||+++.. |..
T Consensus 389 ~eVe~G~~Y~lVvTT~---~GLyR-------------------------Y~iGDvVrvt----------------gf~~~ 424 (597)
T PLN02249 389 ADVEVGKEYELVITTY---AGLYR-------------------------YRVGDILRVT----------------GFHNS 424 (597)
T ss_pred HHcCCCCeEEEEEEcc---cceeE-------------------------eecCCEEEEe----------------eccCC
Confidence 3567788889998653 34453 9999999993 333
Q ss_pred cceEEEEcccCCeEEeCCeecChHHHHHHHHHh
Q psy14338 1639 HDAVFVVGALDETIMLRGMRYHPIDIENSVMRA 1671 (1761)
Q Consensus 1639 ~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~ 1671 (1761)
.+.|.|+||.+.++.+.|+++.-.+++. ++..
T Consensus 425 ~P~i~F~gR~~~~ls~~GEKl~e~~v~~-Av~~ 456 (597)
T PLN02249 425 APQFKFIRRKNVLLSIESDKTDEADLQK-AVEN 456 (597)
T ss_pred CcEEEEEccCCcceecccccCCHHHHHH-HHHH
Confidence 6779999999999999999999999999 5555
|
|
| >PLN02247 indole-3-acetic acid-amido synthetase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.17 Score=64.62 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=50.1
Q ss_pred CCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEe----CCCeEEEEeccCCeEEEC
Q psy14338 487 CKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLG----PGGLVFVCGSRDGLMTVT 562 (1761)
Q Consensus 487 ~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~----~dG~l~~~GR~d~qvki~ 562 (1761)
|..|..-||+|..- .|.| =||.||+++.. .-=.+.|++|.+.+..+.
T Consensus 398 vk~G~~YelVvTt~---~GLY--------------------------RYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~ 448 (606)
T PLN02247 398 VKVGHYYELVVTTF---TGLY--------------------------RYRVGDILMVTGFYNNAPQFRFVQRRNVVLSID 448 (606)
T ss_pred ccCCCeEEEEEEec---CceE--------------------------EEecCCEEEEeeecCCCceEEEEecCCceeecc
Confidence 67899999999652 1211 18999999874 334699999999999999
Q ss_pred CcccChHHHHHHHHhcC
Q psy14338 563 GRKHNADDIIATVLAVE 579 (1761)
Q Consensus 563 G~rIe~~eIE~~l~~~~ 579 (1761)
|++..-.++-.++.+..
T Consensus 449 gEK~tE~~l~~Av~~a~ 465 (606)
T PLN02247 449 TDKTNEEDLLKAVTQAK 465 (606)
T ss_pred cccCCHHHHHHHHHHHH
Confidence 99999999987776643
|
|
| >PLN02247 indole-3-acetic acid-amido synthetase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.14 Score=65.17 Aligned_cols=68 Identities=12% Similarity=0.084 Sum_probs=50.9
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccc
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHD 1640 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~ 1640 (1761)
..+..|..-||.|.. ..|-+. ||.||+++.... =++.+
T Consensus 396 ~evk~G~~YelVvTt---~~GLYR-------------------------YrlGDvv~V~GF--------------~n~~P 433 (606)
T PLN02247 396 VDVKVGHYYELVVTT---FTGLYR-------------------------YRVGDILMVTGF--------------YNNAP 433 (606)
T ss_pred HHccCCCeEEEEEEe---cCceEE-------------------------EecCCEEEEeee--------------cCCCc
Confidence 356788889999864 234442 899999998321 11245
Q ss_pred eEEEEcccCCeEEeCCeecChHHHHHHHHHh
Q psy14338 1641 AVFVVGALDETIMLRGMRYHPIDIENSVMRA 1671 (1761)
Q Consensus 1641 ~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~ 1671 (1761)
.+.|+||.+.+..+.|.+..-.++-. ++.+
T Consensus 434 ~~~Fv~R~~~vlsi~gEK~tE~~l~~-Av~~ 463 (606)
T PLN02247 434 QFRFVQRRNVVLSIDTDKTNEEDLLK-AVTQ 463 (606)
T ss_pred eEEEEecCCceeecccccCCHHHHHH-HHHH
Confidence 59999999999999999999999887 4544
|
|
| >PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0059 Score=58.83 Aligned_cols=82 Identities=26% Similarity=0.369 Sum_probs=48.2
Q ss_pred CeecChHHHHHHHHHhccCcce-eEEEe--e--CCeEEEEEEeCCCch----hHhhHHHHHHHHHhhhcCceeeEEEEEC
Q psy14338 1656 GMRYHPIDIENSVMRAHKKIAE-CAVFT--W--TNLLVVVVELDGNES----EALDLVPLVTNAVLEEHHLIVGVAVVVD 1726 (1761)
Q Consensus 1656 G~rI~~~eIE~~~l~~~p~V~~-a~Vv~--~--~~~~~a~v~~~~~~~----~~~~l~~~l~~~~Lp~~~~vP~~i~~v~ 1726 (1761)
|.||+|..||+ ++.++|++.. -.++. . .|.+...|+...... ..+++.+.++++ |-..--+...+.+++
T Consensus 1 GvnvfP~~Ie~-vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~-lk~~lgv~~~V~lv~ 78 (96)
T PF14535_consen 1 GVNVFPSQIEE-VLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAER-LKERLGVRPEVELVP 78 (96)
T ss_dssp TEEE-HHHHHH-HHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHH-HHHHHSS-EEEEEE-
T ss_pred CcEECHHHHHH-HHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHH-HHhhcCceEEEEEEC
Confidence 88999999999 9999999983 22221 2 246777777754332 334555555554 322233444789999
Q ss_pred CCCccCCCchhhhH
Q psy14338 1727 PGVVPINSRGEKQR 1740 (1761)
Q Consensus 1727 ~~~lP~t~~GKvdR 1740 (1761)
+++||++ .||..|
T Consensus 79 ~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 79 PGTLPRS-EGKAKR 91 (96)
T ss_dssp TT-S----SSSS-S
T ss_pred CCCccCC-CCcceE
Confidence 9999998 578654
|
|
| >PLN02620 indole-3-acetic acid-amido synthetase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.077 Score=67.39 Aligned_cols=63 Identities=10% Similarity=0.085 Sum_probs=47.9
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
.+..|..-||.|.. ..|.+. ||.||+++.... - ++.+.
T Consensus 403 ev~~G~~YelvvTt---~~GLyR-------------------------YrlGDvv~V~Gf----~----------n~~P~ 440 (612)
T PLN02620 403 DVKLGQEYELVVTT---YAGLYR-------------------------YRVGDVLRVAGF----K----------NKAPQ 440 (612)
T ss_pred HccCCCeEEEEEEe---cCceEE-------------------------EecCCEEEEeee----c----------CCCce
Confidence 46778888988864 234442 899999998311 1 12455
Q ss_pred EEEEcccCCeEEeCCeecChHHHHH
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIEN 1666 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~ 1666 (1761)
+.|++|.+-+..+.|.+..-.++-.
T Consensus 441 ~~Fv~R~~~~lsi~gEK~tE~~l~~ 465 (612)
T PLN02620 441 FSFICRKNVVLSIDSDKTDEVELQN 465 (612)
T ss_pred EEEEeecCceeecccccCCHHHHHH
Confidence 9999999999999999999999877
|
|
| >PLN02620 indole-3-acetic acid-amido synthetase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.21 Score=63.53 Aligned_cols=45 Identities=9% Similarity=0.061 Sum_probs=38.0
Q ss_pred EeecceEEEe----CCCeEEEEeccCCeEEECCcccChHHHHHHHHhcC
Q psy14338 535 TRSGLLGFLG----PGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVE 579 (1761)
Q Consensus 535 yrTGDl~~~~----~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~ 579 (1761)
||.||+++.. ..=.+.|++|++.+..+.|++..-.++-.++.+..
T Consensus 423 YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~ 471 (612)
T PLN02620 423 YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAV 471 (612)
T ss_pred EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHH
Confidence 8999999875 23369999999999999999999999987776544
|
|
| >PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.049 Score=52.46 Aligned_cols=86 Identities=21% Similarity=0.209 Sum_probs=52.5
Q ss_pred CcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCCC-----HHHHHHHHHHHHHHhhhcceeeee
Q psy14338 563 GRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDCS-----EEESFQWMSRVLQAVDSIHQVGLY 637 (1761)
Q Consensus 563 G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~~-----~~~l~~~l~~~Lp~y~~P~~i~~~ 637 (1761)
|.+|+|..||++|.+.+++. .+..++.....+.+.+...++..++.. .+++.+.+++.|-.-.- +++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~----~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lg---v~~- 72 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVS----PEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLG---VRP- 72 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEE----EEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHS---S-E-
T ss_pred CcEECHHHHHHHHHhCcCCC----CcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcC---ceE-
Confidence 78999999999999998872 244444433446677888888887653 35566666666555331 111
Q ss_pred EEEEeCCCCccCCCCCcccH
Q psy14338 638 CLALVPPNYLPKTPLGGIHL 657 (1761)
Q Consensus 638 ~v~~v~~~~lP~t~~GKidR 657 (1761)
.+.+++..+||++ .||..|
T Consensus 73 ~V~lv~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 73 EVELVPPGTLPRS-EGKAKR 91 (96)
T ss_dssp EEEEE-TT-S----SSSS-S
T ss_pred EEEEECCCCccCC-CCcceE
Confidence 3468999999998 688765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1761 | ||||
| 3kxw_A | 590 | The Crystal Structure Of Fatty Acid Amp Ligase From | 2e-32 | ||
| 3pbk_A | 583 | Structural And Functional Studies Of Fatty Acyl-Ade | 1e-20 | ||
| 3pbk_A | 583 | Structural And Functional Studies Of Fatty Acyl-Ade | 2e-08 | ||
| 3t5a_A | 480 | Crystal Structure Of N-Terminal Domain Of Faal28 G3 | 1e-14 | ||
| 3e53_A | 480 | Crystal Structure Of N-Terminal Domain Of A Fatty A | 3e-13 | ||
| 3t5b_A | 396 | Crystal Structure Of N-Terminal Domain Of Facl13 Fr | 2e-04 | ||
| 3r44_A | 517 | Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas | 2e-04 | ||
| 1amu_A | 563 | Phenylalanine Activating Domain Of Gramicidin Synth | 5e-04 |
| >pdb|3KXW|A Chain A, The Crystal Structure Of Fatty Acid Amp Ligase From Legionella Pneumophila Length = 590 | Back alignment and structure |
|
| >pdb|3PBK|A Chain A, Structural And Functional Studies Of Fatty Acyl-Adenylate Ligases From E. Coli And L. Pneumophila Length = 583 | Back alignment and structure |
|
| >pdb|3PBK|A Chain A, Structural And Functional Studies Of Fatty Acyl-Adenylate Ligases From E. Coli And L. Pneumophila Length = 583 | Back alignment and structure |
|
| >pdb|3T5A|A Chain A, Crystal Structure Of N-Terminal Domain Of Faal28 G330w Mutant From Mycobacterium Tuberculosis Length = 480 | Back alignment and structure |
|
| >pdb|3E53|A Chain A, Crystal Structure Of N-Terminal Domain Of A Fatty Acyl Amp Ligase Faal28 From Mycobacterium Tuberculosis Length = 480 | Back alignment and structure |
|
| >pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 | Back alignment and structure |
|
| >pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 | Back alignment and structure |
|
| >pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 | Back alignment and structure |
|---|
Score = 486 bits (1253), Expect = e-155
Identities = 140/572 (24%), Positives = 227/572 (39%), Gaps = 43/572 (7%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+T QL + A+ + A L GD V L+F PG+ LI AF GCLY G + V I PP
Sbjct: 41 MTYEQLDQHAKAIAATLQAEG-AKPGDRVLLLFAPGLPLIQAFLGCLYAGCIAVPIYPPA 99
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
+ L L + IV SK V+VL + IK + E + P I +
Sbjct: 100 QEKL---LDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIPAIALESIELNRS 156
Query: 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLD 1378
+ + + +A+L ++ +T G+ +SH + + + + I L
Sbjct: 157 SSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLP 216
Query: 1379 PYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTK 1438
P+ +G +L+ +Y G +I++ P NP WL +++Y+ + + C K
Sbjct: 217 PHHDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVK 276
Query: 1439 GLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498
I + K + L T A E R F + F G A +G
Sbjct: 277 R----IREEKKEGLDLSSWVTAFNGA-EPVREETMEHFYQAFKEFGFRKEAFYPCYGLAE 331
Query: 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPE 1558
+ G + + ++ RV + SP S L+ SG + VK I +P+
Sbjct: 332 ATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQEVK--IIDPD 389
Query: 1559 TKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFL 1618
T C +GEIWVQS A GY + E F+ ++ +Y RTG LGFL
Sbjct: 390 TLIPCDFDQVGEIWVQSNSVAKGY---WNQPEETRHAFAGKIKDDERSAIYLRTGDLGFL 446
Query: 1619 RRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKI--A 1676
+ ++V G + + I++ G ++P DIE S+M +
Sbjct: 447 HE-------------------NELYVTGRIKDLIIIYGKNHYPQDIEFSLMHSPLHHVLG 487
Query: 1677 ECAVFTWTN----LLVVVVELDGNESEALD---LVPLVTNAVLEEHHLIVGVAVVVDPGV 1729
+CA F L V+ E+ + + L + V E H L V V++
Sbjct: 488 KCAAFVIQEEHEYKLTVMCEVKNRFMDDVAQDNLFNEIFELVYENHQLEVHTIVLIPLKA 547
Query: 1730 VPINSRGEKQRMHLRDGFLADQLDPIYVAYNM 1761
+P + G+ +R R L L PI + +
Sbjct: 548 MPHTTSGKIRRNFCRKHLLDKTL-PIVATWQL 578
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 2e-84
Identities = 131/615 (21%), Positives = 239/615 (38%), Gaps = 59/615 (9%)
Query: 72 SLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLT 131
SL ++L ++ + T L+ T+TY +L + +A TL
Sbjct: 2 SLKKEYLQCQSLVDVVRLRALHSPNKKSCTFLNKEL--EETMTYEQLDQHAKAIAATLQ- 58
Query: 132 KPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQI 191
K GDR+ L++ + + AF GC++AG + VP + ++ +
Sbjct: 59 -------AEGAKPGDRVLLLFAPG--LPLIQAFLGCLYAGCIAVP--IYPPAQEKLLDKA 107
Query: 192 GFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRL 251
++ + + L +K F P E + +
Sbjct: 108 QRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIP---AIALESIELNRSSSWQPTSI 164
Query: 252 TDDTPAYIEYT---TDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET 308
+ A+++YT T GV V+ +L + + + H + + L +
Sbjct: 165 KSNDIAFLQYTSGST---MHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDM 221
Query: 309 GLWHSVLTSVLNGMHAVYI-PYALMKVNPASWMQMITKYRASVA---------VVKSRDL 358
GL +LT + G+ A+ + P++ ++ NP SW++ ITKY+A+++ VK
Sbjct: 222 GLIGCILTPIYGGIQAIMMSPFSFLQ-NPLSWLKHITKYKATISGSPNFAYDYCVKR--- 277
Query: 359 HWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSE 418
+ + + + LSS G A P + + F F+ G R +A PC +E
Sbjct: 278 ----IREEKKEGLDLSSWVTAFNG--AEPVREETMEHFYQAFKEFGFRKEAFYPCYGLAE 331
Query: 419 -CLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTV 477
L V+ PG + T L+ V +NS S L G + + +
Sbjct: 332 ATLLVTGGTPGSSYKTLT----LAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKI 385
Query: 478 VKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRS 537
+ D+ C D+VGEI V S YW P + F + D Y R+
Sbjct: 386 IDPDT-LIPCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGK--IKDDER--SAIYLRT 440
Query: 538 GLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL 597
G LGFL L +V G L+ + G+ H DI +++ G+ A F I+
Sbjct: 441 GDLGFLHENEL-YVTGRIKDLIIIYGKNHYPQDIEFSLMHSPLH--HVLGKCAAFVIQEE 497
Query: 598 RDERICVIAEQRPDCSEEESF-QWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIH 656
+ ++ V+ E + ++ + + + + V HQ+ ++ + L+P +P T G I
Sbjct: 498 HEYKLTVMCEVKNRFMDDVAQDNLFNEIFELVYENHQLEVHTIVLIPLKAMPHTTSGKIR 557
Query: 657 LSECKRRFLEGNLHP 671
+ C++ L+ L
Sbjct: 558 RNFCRKHLLDKTLPI 572
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 1e-28
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKI--AECAVFTWTN----LLVVVVELDG 1061
++V G + + I++ G ++P DIE S+M + +CA F L V+ E+
Sbjct: 451 LYVTGRIKDLIIIYGKNHYPQDIEFSLMHSPLHHVLGKCAAFVIQEEHEYKLTVMCEVKN 510
Query: 1062 NESEALD---LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 1118
+ + L + V E H L V V++ +P + G+ +R R L L
Sbjct: 511 RFMDDVAQDNLFNEIFELVYENHQLEVHTIVLIPLKAMPHTTSGKIRRNFCRKHLLDKTL 570
Query: 1119 DPIYIW----VQSPHNASGY 1134
+ W ++ H+ +
Sbjct: 571 PIVATWQLNKIEEGHHHHHH 590
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-24
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 772 RKHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINT 831
+ Q + ++++ RA + T LN + +T QL + A+ + A L
Sbjct: 8 LQCQSLVDVVRLRALHSPNKKSCTFLNKELEET--MTYEQLDQHAKAIAATLQAEG-AKP 64
Query: 832 GDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTL 874
GD V L+F PG+ LI AF GCLY G + V I PP + L
Sbjct: 65 GDRVLLLFAPGLPLIQAFLGCLYAGCIAVPIYPPAQEKLLDKA 107
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-18
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 869 NLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLE 928
+L+ Q + ++++ RA + T LN + +T QL + A+ + A L
Sbjct: 2 SLKKEYLQCQSLVDVVRLRALHSPNKKSCTFLNKELEET--MTYEQLDQHAKAIAATLQA 59
Query: 929 RAKINTGDHVALIFPPGIDLICAFYGCL 956
GD V L+F PG+ LI AF GCL
Sbjct: 60 EG-AKPGDRVLLLFAPGLPLIQAFLGCL 86
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-08
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 1123 IWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRR 1172
IWVQS A GY + E F+ ++ +Y RTG LGFL
Sbjct: 402 IWVQSNSVAKGY---WNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLHE 448
|
| >3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 | Back alignment and structure |
|---|
Score = 199 bits (507), Expect = 6e-55
Identities = 94/448 (20%), Positives = 164/448 (36%), Gaps = 42/448 (9%)
Query: 1189 SVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVG 1248
D A LT SQL++R V L TGD V + P G++ + AF G L G
Sbjct: 49 EQDWDGVAITLTWSQLYRRTLNVAQELSRCGS--TGDRVVISAPQGLEYVVAFLGALQAG 106
Query: 1249 AVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTI 1308
+ V + P T ++ S V +L+ + + + A + S P+I
Sbjct: 107 RIAVPLSVPQG---GVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGE--SPPSI 161
Query: 1309 LDTDDMPKKKLAAL-YRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL 1367
++ D + ++ AYL ++ +T AG+ MSH V +
Sbjct: 162 IEVDLLDLDAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFA 221
Query: 1368 ------YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQY 1421
P+ + L Y +G + + + + G+ ++L P PA W+ ++
Sbjct: 222 DTDGIPPPNSALVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASD 281
Query: 1422 RVRDTFC---SYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP-RIHLTSAFS 1477
+ ++ EL + LG + T + +E + F+
Sbjct: 282 FHAFSAAPNFAF---ELAAR----RTTDDDMAGRDLGNILTILSGSE--RVQAATIKRFA 332
Query: 1478 KLFSALGLSPRAVSTSFG---CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGS 1534
F+ L R + S+ V +A G P V D +L
Sbjct: 333 DRFARFNLQERVIRPSYWLAEATVYVATSKPGQ---PPETVDFDTESLSAGHA--KPCAG 387
Query: 1535 PHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQ 1594
+ L+ + V I + +T +C D +GEIWV + A+GY + E +
Sbjct: 388 GGATSLISYMLPRSPI-VRIVDSDTCIECPDGTVGEIWVHGDNVANGY---WQKPDESER 443
Query: 1595 QFSARLVTGNTGEL---YARTGYLGFLR 1619
F ++VT + G + RTG GF+
Sbjct: 444 TFGGKIVTPSPGTPEGPWLRTGDSGFVT 471
|
| >3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 | Back alignment and structure |
|---|
Score = 191 bits (486), Expect = 4e-52
Identities = 103/521 (19%), Positives = 176/521 (33%), Gaps = 73/521 (14%)
Query: 67 PAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNG---KLSITLTYGKLLSRSL 123
+ G R+L AA++ P T +D ++ITLT+ +L R+L
Sbjct: 10 HSSGLVPRGSHMSVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTL 69
Query: 124 KVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTR 183
VA L +GDR+ + P + ++ AF G + AG + VP+ VP +
Sbjct: 70 NVAQELS---------RCGSTGDRVVISAPQG--LEYVVAFLGALQAGRIAVPLSVP--Q 116
Query: 184 RDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPK 243
++ +L LT+ + + + + A G + + L
Sbjct: 117 GGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRP----GESPPSIIEVDLLDLDAP 172
Query: 244 DWAPQPRLTDDTPAYIEYT---TDRDGSVMGVTVTRAAMLSHCRALTQACHYT------E 294
+ + AY++YT T + GV ++ + + L
Sbjct: 173 NGYTFKEDEYPSTAYLQYTSGST---RTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPP 229
Query: 295 GENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVK 354
+V L F + GL + +L G AV PA WM ++ + +
Sbjct: 230 NSALVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHAFS--- 286
Query: 355 SRDLHWG------LLATK----DHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKG 404
L A + D L ++ +L G+ ++ +F F
Sbjct: 287 -----AAPNFAFELAARRTTDDDMAGRDLGNILTILS--GSERVQAATIKRFADRFARFN 339
Query: 405 LRPDAICPCASSSE-CLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTL 463
L+ I P +E + V+ +PG+ LS G + TSL
Sbjct: 340 LQERVIRPSYWLAEATVYVATSKPGQPPETVD----FDTESLSAGHAKPCAGGGATSLI- 394
Query: 464 QDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLL 523
I+ +V D+ C VGEI V + YW P S TF ++
Sbjct: 395 -SYMLP-RSPIVRIVDSDT-CIECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGK-IV 450
Query: 524 ADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGR 564
+ + R+G GF+ DG M + GR
Sbjct: 451 TPSPGTPEGPWLRTGDSGFV-----------TDGKMFIIGR 480
|
| >3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 2e-18
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQL---LTCSQLHKRAERVGALLLERAKINTGD 833
+ L+ A FT ++ + + LT SQL++R V L TGD
Sbjct: 26 LPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS--TGD 83
Query: 834 HVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQ 868
V + P G++ + AF G L G + V + P
Sbjct: 84 RVVISAPQGLEYVVAFLGALQAGRIAVPLSVPQGG 118
|
| >3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 2e-13
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Query: 863 RPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAAQL---LTCSQLHKRA 919
+ + + + + L+ A FT ++ + + LT SQL++R
Sbjct: 9 HHSSGLVPRGSHMSVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRT 68
Query: 920 ERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLC-----CPSNHPTPS 966
V L TGD V + P G++ + AF G L P + P
Sbjct: 69 LNVAQELSRCGS--TGDRVVISAPQGLEYVVAFLGALQAGRIAVPLSVPQGG 118
|
| >2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 4e-22
Identities = 79/482 (16%), Positives = 145/482 (30%), Gaps = 118/482 (24%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
+ TYG+L R+ + A L + +RI LV + + AF G ++AG
Sbjct: 48 STTYGELEERARRFASALR--------TLGVHPEERILLVMLDT--VALPVAFLGALYAG 97
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGE---------VV 222
+VPV LT D ++L + + S A ++ + +
Sbjct: 98 VVPVVANTLLTPAD-----YVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQ 152
Query: 223 AFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYT---TDRDGSVMGVTVTRAAM 279
+ P+L E + DD A+ Y+ T G G T A +
Sbjct: 153 PRESEPRLAPLFEELIDAAAPAAKAAATGCDD-IAFWLYSSGST---GKPKGTVHTHANL 208
Query: 280 LSHCRALTQACH-YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPAS 338
+ E + + GL + + + G A+ + + +
Sbjct: 209 YWTAELYAKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAE---RPTADA 265
Query: 339 WMQMITKYRASVAV-VKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFL 397
+ ++R +V V + L+ +L + + + ++R+
Sbjct: 266 IFARLVEHRPTVFYGVPT--LYANMLVSPNLPARADVAIRI------------------- 304
Query: 398 SVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENS 457
C S+ E L + A G +L G + E
Sbjct: 305 ---------------CTSAGEALPREIGERFTA---HFGCEILDGIGST--------EML 338
Query: 458 LTSLTLQD-------CGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLP 510
L+ + G+ +PG + + D + EVG++ + YW
Sbjct: 339 HIFLSNRAGAVEYGTTGRPVPGYEIELR--DEAGHAVPDGEVGDLYIKGPSAAVMYWNNR 396
Query: 511 GLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADD 570
S TF + RSG P +G GR DD
Sbjct: 397 EKSRATF-------------LGEWIRSGDKYCRLP----------NGCYVYAGRS---DD 430
Query: 571 II 572
++
Sbjct: 431 ML 432
|
| >2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 5e-13
Identities = 82/509 (16%), Positives = 159/509 (31%), Gaps = 125/509 (24%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
T +L +RA R + L ++ + + L+ + L AF G LY G VPV
Sbjct: 49 TTYGELEERARRFASALRTL-GVHPEERILLVMLDTVALPVAFLGALYAGVVPV------ 101
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKS--KEASNVVDIKSWPTILDTDDMPK 1316
N T ++ S + V+++ +++ + + A + +++
Sbjct: 102 VANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESEPRLA 161
Query: 1317 KKLAALYRAPTAEM---------LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL 1367
L A +A+ +S +TG G +H ++ EL
Sbjct: 162 PLFEELIDAAAPAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTH-------ANLYWTAEL 214
Query: 1368 YPSRHIAL--------CLDPYCGLGFALWV--LSSVYSGHHSILIPPSEVEVNPALWLSA 1417
Y + + + L + G +IL+ +
Sbjct: 215 YAKPILGIAENDVVFSAAKL--FFAYGLGNGLTFPLSVGATAILMAE---RPTADAIFAR 269
Query: 1418 VSQYRVRDTFCS----YGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473
+ ++R F Y M + A +R C E
Sbjct: 270 LVEHRPT-VFYGVPTLYANM----------LVSPNLPARADVAIRICTSAGE-------- 310
Query: 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERG 1533
AL PR + F I L G S E +++ ++R VE G
Sbjct: 311 --------AL---PREIGERFTAHFGCEI-LDGIGSTEMLHIFL------SNRAGAVEYG 352
Query: 1534 SPHSLCLLESGKLLPGVKVIIANPETKGQ-CGDSHLGEIWVQSPHNASGYFSLYGDESEY 1592
+ +G+ +PG ++ + + G D +G+++++ P A Y + + +
Sbjct: 353 T--------TGRPVPGYEIELRDEA--GHAVPDGEVGDLYIKGPSAAVMY---WNNREKS 399
Query: 1593 AQQFSAR-LVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDET 1651
F + +G+ G + R+ D + V
Sbjct: 400 RATFLGEWIRSGDKYCRLPN-GCYVYAGRS------------------DDMLKVS----- 435
Query: 1652 IMLRGMRYHPIDIENSVMRAHKKIAECAV 1680
G P+++E V+ H + E AV
Sbjct: 436 ----GQYVSPVEVE-MVLVQHDAVLEAAV 459
|
| >2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 1e-05
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
T +L +RA R + L ++ + + L+ + L AF G LY G VPV
Sbjct: 49 TTYGELEERARRFASALRTL-GVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANT 105
|
| >3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 1e-17
Identities = 68/459 (14%), Positives = 139/459 (30%), Gaps = 105/459 (22%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L ++AA +++G T A ++ + ++ + ++ + K+A + S
Sbjct: 21 LADRIDAAAEKFGEKT--AIISAEPKFPSEFPESMNFLEICEVTKKLASGI--------S 70
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
++ G+ + + PN+ I+++ Y PVPI + + +L
Sbjct: 71 RKGVRKGEHVGVCIPNS--IDYVMTIYALWRVAATPVPINPMYKSFE-----LEHILNDS 123
Query: 199 DIQVALTSDACLKGLPKTAAG---EVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDT 255
+ + + E V G + +E + +D+ ++
Sbjct: 124 EATTLVVHSMLYENFKPVLEKTGVERVFVVGGEVNSL--SEVMDSGSEDFENVKVNPEED 181
Query: 256 PAYIEYTTDRDGSVMGVT-VTRAAMLSH------CRALTQACHYTEGENMVCVLDFKRET 308
A I YT G T + + ML+H L A + + +V +
Sbjct: 182 VALIPYTG-------GTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHSA 234
Query: 309 GLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA-VVKSRDLHWGLLATKD 367
V V G V + N + I KY+ + + V L+ T +
Sbjct: 235 EF-GLVNLMVTVGNEYVVMG----MFNQEMLAENIEKYKGTFSWAVPP--ALNVLVNTLE 287
Query: 368 --HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAI----------CPCAS 415
+K S L++ G P + + ++ L + K P CP +
Sbjct: 288 SSNKTYDWSYLKVFATG-AW-PVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVT 345
Query: 416 SSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIM 475
+ + + + + G M +
Sbjct: 346 T--NPPLRLDKST------------T------------------------QGVPMSDIEL 367
Query: 476 TVVKMDSPSYLCKTDEVGEICVASTGTGSQ----YWGLP 510
V+ ++ L E GEI + G YW
Sbjct: 368 KVISLEDGREL-GVGESGEIVIR----GPNIFKGYWKRE 401
|
| >3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 8e-08
Identities = 36/239 (15%), Positives = 84/239 (35%), Gaps = 36/239 (15%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+ ++ + +++ + + + + G+HV + P ID + Y V A PV I P
Sbjct: 53 MNFLEICEVTKKLASGISRK-GVRKGEHVGVCIPNSIDYVMTIYALWRVAATPVPINP-- 109
Query: 1259 PQNLQTTLPTVR----MIVDVSKSVLVLSNQNVIKLLKSKEASNVV-------DIKSWPT 1307
+ ++ D + LV+ + E + V ++ S
Sbjct: 110 -------MYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFVVGGEVNSLSE 162
Query: 1308 ILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL 1367
++D+ + + E +A + ++ TTGM G+ ++H + + + +A L
Sbjct: 163 VMDSGSEDFENVK----VNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGL 218
Query: 1368 YPSRHIALCLDPYC---GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 1423
+ P G V V G+ +++ + + +Y+
Sbjct: 219 -SHMDTIVGCMPMFHSAEFGL---VNLMVTVGNEYVVMGMFN----QEMLAENIEKYKG 269
|
| >3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 1e-05
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 777 ISEILKWRAASTSEHV--IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDH 834
+++ + A E I + + ++ + +++ + + + + G+H
Sbjct: 21 LADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRK-GVRKGEH 79
Query: 835 VALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
V + P ID + Y V A PV I P
Sbjct: 80 VGVCIPNSIDYVMTIYALWRVAATPVPINP 109
|
| >3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 1e-17
Identities = 55/322 (17%), Positives = 100/322 (31%), Gaps = 65/322 (20%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
+ L A V +TY ++ + + + A L
Sbjct: 18 IGWMLRQRATVSPRLQ-----AYVEPSTDV---RMTYAQMNALANRCADVLT-------- 61
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ GDR+AL+ PN+ F C FYG G V VPI L + + F+L
Sbjct: 62 ALGIAKGDRVALLMPNSVE--FCCLFYGAAKLGAVAVPINTRLAAPE-----VSFILSDS 114
Query: 199 DIQVALTSDACLKGLPKTAAG-----EVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTD 253
+V + + A V + G L + A P
Sbjct: 115 GSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADSLAERLRSAAAD-----EPAVECGG 169
Query: 254 DTPAYIEYT---TDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310
D +I YT T G GV T ++ S + + ++ L +
Sbjct: 170 DDNLFIMYTSGTT---GHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPL------PM 220
Query: 311 WHS-----VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASV-----AVVKSRDLHW 360
+H V+ S + G+ + +P + + +I + R + A++
Sbjct: 221 FHVAALTTVIFSAMRGVTLISMP----QFDATKVWSLIVEERVCIGGAVPAIL------N 270
Query: 361 GLLATKDHKDISLSSLRLLLVG 382
+ + ++ R + G
Sbjct: 271 FMRQVPEFAELDAPDFRYFITG 292
|
| >3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 6e-08
Identities = 51/234 (21%), Positives = 90/234 (38%), Gaps = 17/234 (7%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+T +Q++ A R +L I GD VAL+ P ++ C FYG +GAV V
Sbjct: 44 MTYAQMNALANRCADVLTALG-IAKGDRVALLMPNSVEFCCLFYGAAKLGAVAV------ 96
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
P N + P V I+ S S +V+ ++ + + + D + ++
Sbjct: 97 PINTRLAAPEVSFILSDSGSKVVIYGAPSAPVID-AIRAQADPPGTVTDWIGADSLAERL 155
Query: 1319 LAALYRAPTAEM----LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIA 1374
+A P E ++ ++ TTG G+ +H +V S S ++ +
Sbjct: 156 RSAAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLL 215
Query: 1375 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFC 1428
L L P + V+ S G I +P + + S + + RV
Sbjct: 216 LPL-PMFHVAALTTVIFSAMRGVTLISMP----QFDATKVWSLIVEERVCIGGA 264
|
| >3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 3e-05
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 777 ISEILKWRAASTSEH--VIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDH 834
I +L+ RA + + + + +T +Q++ A R +L I GD
Sbjct: 18 IGWMLRQRATVSPRLQAYVEPSTDVR------MTYAQMNALANRCADVLTALG-IAKGDR 70
Query: 835 VALIFPPGIDLICAFYGCLYVGAVPVTI 862
VAL+ P ++ C FYG +GAV V I
Sbjct: 71 VALLMPNSVEFCCLFYGAAKLGAVAVPI 98
|
| >4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 1e-17
Identities = 66/413 (15%), Positives = 130/413 (31%), Gaps = 89/413 (21%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
++Y +L++R+ +VA L+ L+ GDR+A + L + + AG
Sbjct: 28 KISYAELVARAGRVANVLV--------ARGLQVGDRVAAQTEKSV--EALVLYLATVRAG 77
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLT 231
V +P+ T ++ + + + ++ + + G+ AA +
Sbjct: 78 GVYLPLNTAYTLH-----ELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPDG 132
Query: 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEY---TTDRDGSVMGVTVTRAAMLSHCRALTQ 288
A + D A I Y TT G G ++ + S+ L
Sbjct: 133 RGSLTDAAAGASEAFATIDRGADDLAAILYTSGTT---GRSKGAMLSHDNLASNSLTLVD 189
Query: 289 ACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRA 348
+T + ++ L GL+ + ++ +++P K +P + ++ +
Sbjct: 190 YWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLP----KFDPDKILDLMARATV 245
Query: 349 SVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPD 408
+ V + LL + + +RL + G A
Sbjct: 246 LMGVPT---FYTRLLQSPRLTKETTGHMRLFISG-SA----------------------- 278
Query: 409 AICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQD--- 465
P R A TG VL G++ E ++ + D
Sbjct: 279 ---PLL-------ADTHREWSA---KTGHAVLERYGMT--------ETNMNTSNPYDGDR 317
Query: 466 ----CGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQ----YWGLP 510
G +PG V ++ ++G I V G YW +P
Sbjct: 318 VPGAVGPALPGVSARVTDPETGK-ELPRGDIGMIEVK----GPNVFKGYWRMP 365
|
| >4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 1e-05
Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 18/212 (8%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
++ ++L RA RV +L+ R + GD VA ++ + + + G V + +
Sbjct: 29 ISYAELVARAGRVANVLVAR-GLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPL---- 83
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLL-----KSKEASNVVDIKSWPTILDTDD 1313
N TL + + ++ +V+ + + + K + ++ D
Sbjct: 84 --NTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPDGRGSLTDAAA 141
Query: 1314 MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHI 1373
+ A + R LA + ++ TTG G +SH + S ++ P +
Sbjct: 142 GASEAFATIDRGADD--LAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVL 199
Query: 1374 ALCLDPY--CGLGFALWVLSSVYSGHHSILIP 1403
L P G + ++++ I +P
Sbjct: 200 IHAL-PIYHTH-GLFVASNVTLFARGSMIFLP 229
|
| >4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 8e-05
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
++ ++L RA RV +L+ R + GD VA ++ + + + G V + +
Sbjct: 29 ISYAELVARAGRVANVLVAR-GLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPLNT 85
|
| >3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 1e-15
Identities = 86/461 (18%), Positives = 151/461 (32%), Gaps = 113/461 (24%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L + + + S + NG TY + + +VA L +
Sbjct: 24 LHSYVLENLSNHSSKP-----CLINGANGD---VYTYADVELTARRVASGL--------N 67
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ ++ GD I L P++ F+ AF G G + T + + +
Sbjct: 68 KIGIQQGDVIMLFLPSS--PEFVLAFLGASHRGAIITAANPFSTPAE-----LAKHAKAS 120
Query: 199 DIQVALTSDACLKGLPKTAAG---EVVAFKGWPK--LTWFVTEHLAKTPKDWAPQPRLTD 253
++ +T + + A +V+ P L + L + ++ APQ ++
Sbjct: 121 RAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHF---SELTQADENEAPQVDISP 177
Query: 254 DTPAYIEY---TTDRDGSVMGVTVTRAAMLSH----------CRALTQACHYTEGENMVC 300
D + Y TT G GV ML+H ++ + ++C
Sbjct: 178 DDVVALPYSSGTT---GLPKGV------MLTHKGLITSVAQQVDGDNPNLYFHSEDVILC 228
Query: 301 VLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA-VVKSRDLH 359
VL L +L + G + +P K S + +I KY+ S+A VV +
Sbjct: 229 VLPMFHIYALNSIMLCGLRVGAPILIMP----KFEIGSLLGLIEKYKVSIAPVVPP--VM 282
Query: 360 WGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVF------QSKGLRPDAICPC 413
+ + D LSSLR++ G GA P D + F Q G+
Sbjct: 283 MSIAKSPDLDKHDLSSLRMIKSG-GA-PLGKELEDTVRAKFPQARLGQGYGM-------- 332
Query: 414 ASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473
+E V A + + + CG V+
Sbjct: 333 ---TEAGPVLAMCLAFA--------------------KEPFDIKPGA-----CGTVVRNA 364
Query: 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQ----YWGLP 510
M +V ++ + L ++ GEIC+ G Q Y P
Sbjct: 365 EMKIVDPETGASL-PRNQPGEICI----RGDQIMKGYLNDP 400
|
| >3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 6e-11
Identities = 64/407 (15%), Positives = 131/407 (32%), Gaps = 81/407 (19%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
T + + A RV + L + I GD + L P + + AF G + GA+ P
Sbjct: 50 YTYADVELTARRVASGL-NKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANP-- 106
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNV----VD-----IKSWPTIL 1309
T + +L+ K+ S+V VD + +
Sbjct: 107 ---FSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFSELT 163
Query: 1310 DTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL-- 1367
D+ + + + + L +S TTG+ G+ ++H + +
Sbjct: 164 QADENEAPQ-----VDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNL 218
Query: 1368 -YPSRHIALCLDP----YCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 1422
+ S + LC+ P Y +L + G +++P + L + +Y+
Sbjct: 219 YFHSEDVILCVLPMFHIY---ALNSIMLCGLRVGAPILIMP----KFEIGSLLGLIEKYK 271
Query: 1423 VRDTFCSYGV--MELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLF 1480
V + + V + + ++ S P L + L +R
Sbjct: 272 V--SI-APVVPPVMM---SIAKS-PDLDKHD--LSSLRMIKSGG---------------- 306
Query: 1481 SALGLSPRAVSTSFGCRVNIAICLQG----ASSPEPSCVYVDLRALRNDRVSLVERGSPH 1536
+ L + + + + A QG + P + + + + G+
Sbjct: 307 APL---GKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKP-----GA-- 356
Query: 1537 SLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYF 1583
G ++ ++ I +PET + GEI ++ GY
Sbjct: 357 ------CGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYL 397
|
| >3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 3e-05
Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 773 KHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTG 832
K+ + + ++ S G+ + T + + A RV + L + I G
Sbjct: 20 KNLPLHSYVLENLSNHSSKPCLIN----GANGDVYTYADVELTARRVASGL-NKIGIQQG 74
Query: 833 DHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
D + L P + + AF G + GA+ P
Sbjct: 75 DVIMLFLPSSPEFVLAFLGASHRGAIITAANP 106
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 3e-15
Identities = 73/467 (15%), Positives = 130/467 (27%), Gaps = 118/467 (25%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L A++RY +A +TY + S+++A +
Sbjct: 22 AGEQLHKAMKRYALVPGT--IAFTDAHIEV---NITYAEYFEMSVRLAEAM--------K 68
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
L + RI + N+ + F G +F G+ P R+ + +
Sbjct: 69 RYGLNTNHRIVVCSENS--LQFFMPVLGALFIGVAVAPANDIYNERE-----LLNSMNIS 121
Query: 199 DIQVALTSDACLKGLPKTAA-----------GEVVAFKGWPKLTWFVTEHLAKTPKDWAP 247
V S L+ + ++G+ + FVT HL ++
Sbjct: 122 QPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDF 181
Query: 248 QPRLTD--DTPAYIEY---TTDRDGSVMGVTVTRA---AMLSHCRALTQACHYTEGENMV 299
P D T A I +T G GV + SH R ++
Sbjct: 182 VPESFDRDKTIALIMNSSGST---GLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAIL 238
Query: 300 CVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA------VV 353
V+ F G++ + L ++ G V + + +++ + Y+ A
Sbjct: 239 SVVPFHHGFGMF-TTLGYLICGFRVVLMY----RFEEELFLRSLQDYKIQSALLVPTLFS 293
Query: 354 KSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSK------GLRP 407
+ LS+L + G P S + F GL
Sbjct: 294 -------FFAKSTLIDKYDLSNLHEIASG--GAPLSKEVGEAVAKRFHLPGIRQGYGL-- 342
Query: 408 DAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCG 467
+E + + P G
Sbjct: 343 ---------TETTSAILITPEGDDKPGA------------------------------VG 363
Query: 468 QVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQ----YWGLP 510
+V+P VV +D+ L ++ GE+CV G Y P
Sbjct: 364 KVVPFFEAKVVDLDTGKTL-GVNQRGELCV----RGPMIMSGYVNNP 405
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 3e-10
Identities = 31/245 (12%), Positives = 81/245 (33%), Gaps = 33/245 (13%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+T ++ + + R+ A ++R +NT + + + G L++G
Sbjct: 51 ITYAEYFEMSVRL-AEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPAND-- 107
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVD-------------IKSW 1305
+ + + +V+ +S + + K+L ++ ++ +S
Sbjct: 108 ---IYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSM 164
Query: 1306 PTILDTDDMPKKKLAALYRAP--TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK- 1362
T + + P + +A + S +TG+ G+ + H +
Sbjct: 165 YTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARD 224
Query: 1363 -LACELYPSRHIALCLDPYC---GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418
+ L + P+ G+ L + G +L+ L+L ++
Sbjct: 225 PIFGNQIIPDTAILSVVPFHHGFGMFT---TLGYLICGFRVVLMY----RFEEELFLRSL 277
Query: 1419 SQYRV 1423
Y++
Sbjct: 278 QDYKI 282
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-06
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 774 HQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGD 833
+ + + +K R A + FT +T ++ + + R+ A ++R +NT
Sbjct: 23 GEQLHKAMK-RYALVPGTIAFT----DAHIEVNITYAEYFEMSVRL-AEAMKRYGLNTNH 76
Query: 834 HVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
+ + + G L++G
Sbjct: 77 RIVVCSENSLQFFMPVLGALFIGVAVAPAND 107
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-04
Identities = 22/161 (13%), Positives = 50/161 (31%), Gaps = 17/161 (10%)
Query: 862 IRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAER 921
+ P P + + + +K R A + FT +T ++ + + R
Sbjct: 8 KKGPAPFYPLEDGTAGEQLHKAMK-RYALVPGTIAFT----DAHIEVNITYAEYFEMSVR 62
Query: 922 VGALLLERAKINTGDHVALIFPPGIDLICAFYGCL-----CCPSNHPTPSPSESSNHATH 976
+ A ++R +NT + + + G L P+N + E +
Sbjct: 63 L-AEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPAN-DIYNERE----LLN 116
Query: 977 RQNDSG-RQQICSSLIQPKCDQTSQVEKLHDAVFVVGALDE 1016
N S S K + + + ++ + +
Sbjct: 117 SMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTD 157
|
| >3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 4e-15
Identities = 42/293 (14%), Positives = 80/293 (27%), Gaps = 58/293 (19%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
+ TY L + +A L R+ L N+ + + C A
Sbjct: 26 SYTYQNLYCEASLLAKRLKAYQ-----------QSRVGLYIDNSIQ--SIILIHACWLAN 72
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAF------- 224
I I LT + + + S D+Q+ + + + + + F
Sbjct: 73 IEIAMINTRLTPNE-----MTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITT 127
Query: 225 ------KGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYT---TDRDGSVMGVTVT 275
+ + K D A I +T T G V T
Sbjct: 128 NGLLDNTMGIQYDTSNETVVPKESPSNILNTSFNLDDIASIMFTSGTT---GPQKAVPQT 184
Query: 276 RAAMLSHCRALTQACHYTEGENMVCVLD-FKRETGLWHSVLTSVLNGMHAVYIPYALMKV 334
+ ++ + N + VL + +L +V+ G + K
Sbjct: 185 FRNHYASAIGCKESLGFDRDTNWLSVLPIY--HISGLSVLLRAVIEGFTVRIVD----KF 238
Query: 335 NPASWMQMITKYRASV-----AVVKSRDLHWGLLATKDHKDISLSSLRLLLVG 382
N + MI R + + L+ +L+ +L+G
Sbjct: 239 NAEQILTMIKNERITHISLVPQTL------NWLM---QQGLHEPYNLQKILLG 282
|
| >3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 7e-06
Identities = 32/244 (13%), Positives = 62/244 (25%), Gaps = 37/244 (15%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
T L+ A + L K V L I I + C
Sbjct: 27 YTYQNLYCEASLLAKRL----KAYQQSRVGLYIDNSIQSIILIHACWLANIEIA------ 76
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLS----NQNVIKLLKSKEASNVVDIKSWPTILDTDDM 1314
N + T + + L+ +++ + + +LD
Sbjct: 77 MINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMG 136
Query: 1315 PKKKLAALYRAPTAEMLAYLDFSVS------------TTGMLAGIKMSHAAVTSLCRSMK 1362
+ + P L+ S + TTG + + + K
Sbjct: 137 IQYDTSNETVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCK 196
Query: 1363 LACELYPSRHIALCLDPYC---GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVS 1419
+ L + P GL +L +V G ++ + N L+ +
Sbjct: 197 ESLGFDRD-TNWLSVLPIYHISGLS---VLLRAVIEGFTVRIVD----KFNAEQILTMIK 248
Query: 1420 QYRV 1423
R+
Sbjct: 249 NERI 252
|
| >3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-04
Identities = 14/88 (15%), Positives = 21/88 (23%), Gaps = 14/88 (15%)
Query: 777 ISEILKWRAASTSEH--VIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDH 834
+ L +A H + + T L+ A + L K
Sbjct: 3 LDFWLYKQAQQNGHHIAITD--------GQESYTYQNLYCEASLLAKRL----KAYQQSR 50
Query: 835 VALIFPPGIDLICAFYGCLYVGAVPVTI 862
V L I I + C I
Sbjct: 51 VGLYIDNSIQSIILIHACWLANIEIAMI 78
|
| >3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-14
Identities = 94/535 (17%), Positives = 163/535 (30%), Gaps = 153/535 (28%)
Query: 55 PNAPKPEGGVMTPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLT 114
+ P G M+ S P A A +LT
Sbjct: 11 SSGLVPRGSHMS----------SLFPALSPAPTGAPADRP-----ALRFGER-----SLT 50
Query: 115 YGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVP 174
Y +L + + A + R+A+ + A + AG+
Sbjct: 51 YAELAAAAGATA-------------GRIGGAGRVAVWATPA--METGVAVVAALLAGVAA 95
Query: 175 VPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFV 234
VP+ + ++ +L + L + P A E V
Sbjct: 96 VPLNPKSGDK-----ELAHILSDSAPSLVLAPPD-AELPPALGALERVD----------- 138
Query: 235 TEHLAKTPKDWAPQPRLTDDTPAYIEY---TTDRDGSVMGVTVTRAAMLSHCRALTQACH 291
+ + P+ D PA + Y TT G G + R A+ + AL A
Sbjct: 139 ---VDVRARGAVPEDGADDGDPALVVYTSGTT---GPPKGAVIPRRALATTLDALADAWQ 192
Query: 292 YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASV- 350
+T + +V L GL +L + G ++ + + + + A++
Sbjct: 193 WTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG----RFSTEGAARELND-GATML 247
Query: 351 AVVKSRDLHWGLLATKD---HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRP 407
V + ++ + T +L+ RLL+ G
Sbjct: 248 FGVPT--MYHRIAETLPADPELAKALAGARLLVSG------------------------- 280
Query: 408 DAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQD-- 465
S++ L V A ATGR V+ G++ E + + D
Sbjct: 281 -------SAA--LPVHDHERIAA---ATGRRVIERYGMT--------ETLMNTSVRADGE 320
Query: 466 -----CGQVMPGCIMTVVKMD-SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKV 519
G +PG + +V+ D +P + VGEI V ++Y P
Sbjct: 321 PRAGTVGVPLPGVELRLVEEDGTPIAALDGESVGEIQVRGPNLFTEYLNRP--------- 371
Query: 520 TPLLADGTA--LSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDII 572
D TA ++D + R+G + P DG + + GRK A D+I
Sbjct: 372 -----DATAAAFTEDGFFRTGDMAVRDP----------DGYVRIVGRK--ATDLI 409
|
| >3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-05
Identities = 31/205 (15%), Positives = 62/205 (30%), Gaps = 24/205 (11%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT ++L A + VA+ P ++ A L G V
Sbjct: 49 LTYAELAAAAGATAGRIGG------AGRVAVWATPAMETGVAVVAALLAGVAAV------ 96
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
P N ++ + I+ S LVL+ ++ + ++ +
Sbjct: 97 PLNPKSGDKELAHILSDSAPSLVLAPP------DAELPPALGALERVDVDVRARG----- 145
Query: 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLD 1378
A A + ++ TTG G + A+ + ++ A + + L
Sbjct: 146 -AVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLP 204
Query: 1379 PYCGLGFALWVLSSVYSGHHSILIP 1403
+ G L +L + G +
Sbjct: 205 LFHVHGLVLGILGPLRRGGSVRHLG 229
|
| >2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 4e-14
Identities = 72/473 (15%), Positives = 128/473 (27%), Gaps = 131/473 (27%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L ++RY +A G +Y + L +S + L
Sbjct: 25 AGTQLRKYMERYAKLG---AIAFTNAVTGV---DYSYAEYLEKSCCLGKAL--------Q 70
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
L RIAL N F +F G+ P T R+ + LG
Sbjct: 71 NYGLVVDGRIALCSENC--EEFFIPVIAGLFIGVGVAPTNEIYTLRE-----LVHSLGIS 123
Query: 199 DIQVALTSDACLKGLPKTAA-----------GEVVAFKGWPKLTWFVTEHLAKTPK--DW 245
+ +S L + V ++G+ L F+ + + +
Sbjct: 124 KPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGYQCLDTFIKRNTPPGFQASSF 183
Query: 246 APQPRLTDDTPAYIEY---TTDRDGSVMGVTVTRAAMLSH---------CRALTQACHYT 293
+ A I +T G GV L+H R +
Sbjct: 184 KTVEVDRKEQVALIMNSSGST---GLPKGV------QLTHENIVTRFSHARDPIYGNQVS 234
Query: 294 EGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA-- 351
G ++ V+ F G+ + L ++ G V + K + ++++ + Y+ +
Sbjct: 235 PGTAVLTVVPFHHGFGM-FTTLGYLICGFRVVMLT----KFDEETFLKTLQDYKCTSVIL 289
Query: 352 ----VVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSK---- 403
L ++ LS+L + G P S + F
Sbjct: 290 VPTLFA-------ILNKSELLNKYDLSNLVEIASG--GAPLSKEVGEAVARRFNLPGVRQ 340
Query: 404 --GLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSL 461
GL +E + + P
Sbjct: 341 GYGL-----------TETTSAIIITPEGDDKPGA-------------------------- 363
Query: 462 TLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQ----YWGLP 510
G+V+P V+ +D+ L + GE+CV G Y P
Sbjct: 364 ----SGKVVPLFKAKVIDLDTKKSL-GPNRRGEVCV----KGPMLMKGYVNNP 407
|
| >2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 1e-10
Identities = 25/245 (10%), Positives = 80/245 (32%), Gaps = 33/245 (13%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+ ++ +++ + L+ + +AL + L++G
Sbjct: 53 YSYAEYLEKSCCL-GKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNE-- 109
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVD-------------IKSW 1305
+ T V + +++ S + + K++ ++ + +
Sbjct: 110 ---IYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGYQCL 166
Query: 1306 PTILDTDDMPKKKLAALYRAP--TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK- 1362
T + + P + ++ E +A + S +TG+ G++++H + + +
Sbjct: 167 DTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARD 226
Query: 1363 -LACELYPSRHIALCLDPYC---GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418
+ L + P+ G+ L + G +++ + + +L +
Sbjct: 227 PIYGNQVSPGTAVLTVVPFHHGFGMFT---TLGYLICGFRVVMLT----KFDEETFLKTL 279
Query: 1419 SQYRV 1423
Y+
Sbjct: 280 QDYKC 284
|
| >2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 2e-05
Identities = 5/58 (8%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
+ ++ +++ + L+ + +AL + L++G
Sbjct: 53 YSYAEYLEKSCCL-GKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNE 109
|
| >3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 4e-14
Identities = 68/422 (16%), Positives = 123/422 (29%), Gaps = 110/422 (26%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
LT+ L+R+ ++A LL + +GDR+A++ N + G
Sbjct: 31 RLTHRDYLARAERLASGLL--------RDGVHTGDRVAILSQNCSE--MIELIGAVALIG 80
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-----EVVAFKG 226
+ +P+ L + I F+LG V + + + A
Sbjct: 81 AILLPVNYRLNADE-----IAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGD 135
Query: 227 WPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYT---TDRDGSVMGVTVTRAAMLSHC 283
+ + TP P I +T G G +++ +L
Sbjct: 136 GSGPFAPFKDLASDTP---FSAPEFGAADGFVIIHTAAVG---GRPRGALISQGNLLIAQ 189
Query: 284 RALTQACHYTEGENMVCVLDFKRETGLWHS-----VLTSVLNGMHAVYIPYALMKVNPAS 338
+L A TE + + +L L+H +LT G +V K +PA
Sbjct: 190 SSLVDAWRLTEADVNLGML------PLFHVTGLGLMLTLQQAGGASVIAA----KFDPAQ 239
Query: 339 WMQMITKYRASV-----AVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSC 393
+ I ++ +V ++ +L L+SLR + P ++
Sbjct: 240 AARDIEAHKVTVMAEFAPML------GNILDQAAPAQ--LASLRAVTG--LDTPETIERF 289
Query: 394 DQFL---SVFQSKGLRPDAICPCASSSEC--LTVSVRRPGRAGVNATGRGVLSMSGLSYG 448
+ + + + G SE L+ R
Sbjct: 290 EATCPNATFWATFGQ-----------SETSGLSTFAPYRDRPK----------------- 321
Query: 449 VVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWG 508
S G+ + + VV D+ EVGEI + YW
Sbjct: 322 -----------S-----AGRPLFWRTVAVV--DAEDRPLPPGEVGEIVLRGPTVFKGYWN 363
Query: 509 LP 510
Sbjct: 364 NA 365
|
| >3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 6e-07
Identities = 37/235 (15%), Positives = 80/235 (34%), Gaps = 19/235 (8%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT RAER+ + LL ++TGD VA++ ++I +GA+ +
Sbjct: 32 LTHRDYLARAERLASGLLRDG-VHTGDRVAILSQNCSEMIELIGAVALIGAILL------ 84
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
P N + + ++ +V++ + ++ ++ +K I D
Sbjct: 85 PVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVA-GVLPSLGGVKKAYAIGDGSGPFAPF 143
Query: 1319 LAALYRAPTAEM------LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRH 1372
P + + + + G G +S + S+ A L +
Sbjct: 144 KDLASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADV 203
Query: 1373 IALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTF 1427
L P + +L+ +G S++ + +PA + ++V
Sbjct: 204 NLGML-PLFHVTGLGLMLTLQQAGGASVIAA----KFDPAQAARDIEAHKVTVMA 253
|
| >3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-04
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 777 ISEILKWRAASTSEH--VIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDH 834
++++ + AA + + LT RAER+ + LL ++TGD
Sbjct: 8 LADVYRRNAALFPDRTAFMV--------DGVRLTHRDYLARAERLASGLLRDG-VHTGDR 58
Query: 835 VALIFPPGIDLICAFYGCLYVGAVPVTI 862
VA++ ++I +GA+ + +
Sbjct: 59 VAILSQNCSEMIELIGAVALIGAILLPV 86
|
| >1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 1e-13
Identities = 64/451 (14%), Positives = 126/451 (27%), Gaps = 104/451 (23%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
+ L A R A + G + LT+ +L +R VA L
Sbjct: 4 VNEMLRRAATRAPDHC-----ALAVPARG---LRLTHAELRARVEAVAARLH-------- 47
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
L+ R+A+V PN+ + + A G VP + L + + L+
Sbjct: 48 ADGLRPQQRVAVVAPNSA--DVVIAILALHRLGAVPALLNPRLKSAE-----LAELIKRG 100
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAY 258
++ A+ + A + + L V + + P+ PA+
Sbjct: 101 EMTAAVIAVGR---QVADAIFQSGSGARIIFLGDLVRDGEPYSYGPPIEDPQREPAQPAF 157
Query: 259 IEY---TTDRDGSVMGVTVTRAAMLSHCRALTQAC--HYTEGENMVCVLDFKRETGLWHS 313
I Y TT G + + A S ++ + ++ ++ G +
Sbjct: 158 IFYTSGTT---GLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAV 214
Query: 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLH------WGLLATKD 367
++ ++ V + + P +Q++ + + + L L A
Sbjct: 215 LVAALALDGTYVVVE----EFRPVDALQLVQQEQVTS-------LFATPTHLDALAAAAA 263
Query: 368 --HKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR 425
+ L SLR + GA + + P ++E +
Sbjct: 264 HAGSSLKLDSLRHVTFA-GA-TMPDAVLETVHQHL------PGEKVNIYGTTEAMNSLYM 315
Query: 426 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485
R + G + +V++
Sbjct: 316 RQPKTG---------------------------------TEMAPGFFSEVRIVRIGGGVD 342
Query: 486 -LCKTDEVGEICVASTGTGSQ-----YWGLP 510
+ E GE+ VA S Y P
Sbjct: 343 EIVANGEEGELIVA----ASDSAFVGYLNQP 369
|
| >1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 8e-08
Identities = 74/509 (14%), Positives = 136/509 (26%), Gaps = 131/509 (25%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT ++L R E V A L + VA++ P D++ A +GAVP +
Sbjct: 30 LTHAELRARVEAVAARLHADG-LRPQQRVAVVAPNSADVVIAILALHRLGAVPALL---- 84
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
N + + ++ + + + + A + S I+ D+ +
Sbjct: 85 --NPRLKSAELAELIKRGEMTAAVI------AVGRQVADAIFQSGSGARIIFLGDLVRDG 136
Query: 1319 LAALYRAPTAEM------LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRH 1372
Y P + A++ ++ TTG+ + A S M L RH
Sbjct: 137 EPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRH 196
Query: 1373 -IALCLDPY--CGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCS 1429
+ L L P GF +++++ +++ E P L V Q +V F
Sbjct: 197 NVVLGLMPLYHVV-GFFAVLVAALALDGTYVVVE----EFRPVDALQLVQQEQVTSLF-- 249
Query: 1430 YGV-----MELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALG 1484
+ ++ L +R
Sbjct: 250 -ATPTHLDALA-------AAAAHAGSSLKLDSLRHVTF---------------------A 280
Query: 1485 LSP------RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSL 1538
+ V + I + + + +
Sbjct: 281 GATMPDAVLETVHQHLPGEK-VNIYGTTEAMN----------------SLYMRQPKTGT- 322
Query: 1539 CLLESGKLLPGVKVIIANPETKGQ--CGDSHLGEIWVQ-SPHNASGYFSLYGDESEYAQQ 1595
+V I + GE+ V S GY A++
Sbjct: 323 ----EMAPGFFSEVRIVRIGGGVDEIVANGEEGELIVAASDSAFVGY---LNQPQATAEK 375
Query: 1596 FSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA---VFVVGALDETI 1652
G RT + V ++G +D+ I
Sbjct: 376 LQD-------GWY--RTSDVAVW---------------------TPEGTVRILGRVDDMI 405
Query: 1653 MLRGMRYHPIDIENSVMRAHKKIAECAVF 1681
+ G HP +IE V+ + E V
Sbjct: 406 ISGGENIHPSEIER-VLGTAPGVTEVVVI 433
|
| >1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-04
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 777 ISEILKWRAASTSEH--VIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDH 834
++E+L+ A +H + + LT ++L R E V A L +
Sbjct: 4 VNEMLRRAATRAPDHCALAV------PARGLRLTHAELRARVEAVAARLHADG-LRPQQR 56
Query: 835 VALIFPPGIDLICAFYGCLYVGAVPVTI 862
VA++ P D++ A +GAVP +
Sbjct: 57 VAVVAPNSADVVIAILALHRLGAVPALL 84
|
| >1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 3e-13
Identities = 51/319 (15%), Positives = 98/319 (30%), Gaps = 49/319 (15%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L +YG A + +Y +L +R+ ++A
Sbjct: 27 FGDLLRDRAAKYGDRI-----AITCG-----NTHWSYRELDTRADRLAAGFQ-------- 68
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ ++ DR+ + PN F + G +PV + I +
Sbjct: 69 KLGIQQKDRVVVQLPNI--KEFFEVIFALFRLGALPVFALPSHRSSE-----ITYFCEFA 121
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVT-------EHLAKTPKDWAPQPRL 251
+ + DA ++ A +V + P L + L + P +
Sbjct: 122 EAAAYIIPDAYSGFDYRSLARQVQS--KLPTLKNIIVAGEAEEFLPLEDLHTEPVKLPEV 179
Query: 252 TDDTPAYIEY---TTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET 308
A+++ +T G + T + + + C + L
Sbjct: 180 KSSDVAFLQLSGGST---GLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNY 236
Query: 309 GLWHS-VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASV-AVVKSRDLHWGLLATK 366
L VL + G V P +P +I + + ++ A+V L +
Sbjct: 237 PLSSPGVLGVLYAGGRVVLSP----SPSPDDAFPLIEREKVTITALVPP--LAMVWMDAA 290
Query: 367 DHKDISLSSLRLLLVGDGA 385
+ LSSL++L VG GA
Sbjct: 291 SSRRDDLSSLQVLQVG-GA 308
|
| >1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-05
Identities = 81/512 (15%), Positives = 154/512 (30%), Gaps = 130/512 (25%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+ +L RA+R+ A + I D V + P + + +GA+PV P H
Sbjct: 51 WSYRELDTRADRLAAGFQKL-GIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSH 109
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVL--------SNQNVIKLLKSKEAS--NVVDIKSWPTI 1308
+ + +++ + +++ + ++SK + N++
Sbjct: 110 ------RSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEF 163
Query: 1309 LDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELY 1368
L +D+ + + +A+L S +TG+ I +H + C L
Sbjct: 164 LPLEDLHTE--PVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLD 221
Query: 1369 PSRHIALCLDPYCGL-------GFAL-WVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQ 1420
S Y + VL +Y+G +L P +P + +
Sbjct: 222 HS-------TVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSP----SPSPDDAFPLIER 270
Query: 1421 YRVRDTFCSYGV-----MELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSA 1475
+V T V + + + + L ++ V
Sbjct: 271 EKV--TIT-ALVPPLAMVWMDA-------ASSRRDD--LSSLQVLQV------------- 305
Query: 1476 FSKLFSALGLSP------RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSL 1529
G + R V FGC + G + E Y L V+
Sbjct: 306 --------GGAKFSAEAARRVKAVFGCTLQQVF---GMA--EGLVNYTRLDDPEEIIVNT 352
Query: 1530 VERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDE 1589
G P + P + + + + G + + P+ GY Y E
Sbjct: 353 Q--GKP----------MSPYDESRVWDDHDR-DVKPGETGHLLTRGPYTIRGY---YKAE 396
Query: 1590 SEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALD 1649
A F T + + RTG + R T G + V G
Sbjct: 397 EHNAASF--------TEDGFYRTGDIV--RLT-RDG---------------YIVVEGRAK 430
Query: 1650 ETIMLRGMRYHPIDIENSVMRAHKKIAECAVF 1681
+ I G + ++EN + AH + + A+
Sbjct: 431 DQINRGGEKVAAEEVEN-HLLAHPAVHDAAMV 461
|
| >1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 1e-05
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 866
+ +L RA+R+ A + I D V + P + + +GA+PV P H
Sbjct: 51 WSYRELDTRADRLAAGFQKL-GIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSH 109
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 4e-13
Identities = 45/290 (15%), Positives = 81/290 (27%), Gaps = 43/290 (14%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
L+Y +L + +A +L +K G+ + N F+ + G
Sbjct: 50 QLSYRELNQAADNLACSLR--------RQGIKPGETALVQLGNV--AELYITFFALLKLG 99
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLT 231
+ PV R + + + + + V +
Sbjct: 100 VAPVLALFSHQRSE-----LNAYASQIEPALLIADRQHALFSGDDFLNTFVT--EHSSIR 152
Query: 232 ---------WFVTEHLAKTPKDWAPQPRLTDDTPAYIEY---TTDRDGSVMGVTVTRAAM 279
+ P + D AY + TT G+ + T
Sbjct: 153 VVQLLNDSGEHNLQDAINHPAEDFTATPSPADEVAYFQLSGGTT---GTPKLIPRTHNDY 209
Query: 280 LSHCRALTQACHYTEGENMVCVLDFKRETGL-WHSVLTSVLNGMHAVYIPYALMKVNPAS 338
R + C +T+ +C + + L L G V +
Sbjct: 210 YYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAA----DPSATL 265
Query: 339 WMQMITKYRASV-AVVKSRDLHWGLLATKDH--KDISLSSLRLLLVGDGA 385
+I K++ +V A+V L L+SL+LL VG GA
Sbjct: 266 CFPLIEKHQVNVTALVPP--AVSLWLQALIEGESRAQLASLKLLQVG-GA 312
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 8e-06
Identities = 73/510 (14%), Positives = 137/510 (26%), Gaps = 122/510 (23%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
L+ +L++ A+ + L + I G+ + +L F+ L +G PV H
Sbjct: 51 LSYRELNQAADNLACSLRRQG-IKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSH 109
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSN------------QNVIKLLKSKEASNVVDIKSWP 1306
+ + L++++ + S +++
Sbjct: 110 ------QRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEH 163
Query: 1307 TILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE 1366
+ D + P + A A+ +AY S TTG I +H R C+
Sbjct: 164 NLQDAINHPAEDFTA--TPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQ 221
Query: 1367 LYPSRHIALCLDPYC---------GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSA 1417
Y + + L +G +L + + L
Sbjct: 222 FTQQ-------TRYLCAIPAAHNYAMS-SPGSLGVFLAGGTVVLAA----DPSATLCFPL 269
Query: 1418 VSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFS 1477
+ +++V V + L I L ++ V
Sbjct: 270 IEKHQV--NVT-ALVPPAVSLWLQALIEGESRAQ--LASLKLLQV--------------- 309
Query: 1478 KLFSALGLSP------RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVE 1531
G + + GC++ Q E Y L +
Sbjct: 310 ------GGARLSATLAARIPAEIGCQL-----QQVFGMAEGLVNYTRLDDSAEKIIHTQ- 357
Query: 1532 RGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESE 1591
G P P +V +A+ E +G + + P+ GY Y
Sbjct: 358 -GYPMC----------PDDEVWVADAEGN-PLPQGEVGRLMTRGPYTFRGY---YKSPQH 402
Query: 1592 YAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDET 1651
A F + +G L P G + V G +
Sbjct: 403 NASAF--------DANGFYCSGDLI--SID-PEG---------------YITVQGREKDQ 436
Query: 1652 IMLRGMRYHPIDIENSVMRAHKKIAECAVF 1681
I G + +IEN ++ H + A+
Sbjct: 437 INRGGEKIAAEEIEN-LLLRHPAVIYAALV 465
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-05
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 866
L+ +L++ A+ + L + I G+ + +L F+ L +G PV H
Sbjct: 51 LSYRELNQAADNLACSLRRQG-IKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSH 109
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 72.2 bits (176), Expect = 2e-12
Identities = 116/761 (15%), Positives = 216/761 (28%), Gaps = 243/761 (31%)
Query: 1025 YHPIDIENSVMRAH-KKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVTNA----VLE 1079
+H +D E + K I VF V D + + + +++ ++
Sbjct: 4 HHHMDFETGEHQYQYKDILS--VF----EDAFVDNFDCKDVQDM-PKSILSKEEIDHIIM 56
Query: 1080 EHHLIVGVAVVVDPGVVPINSRGEK--QRMHLRDGFLADQLDPIYIWVQSP--------- 1128
+ G + + S+ E+ Q+ F+ + L Y ++ SP
Sbjct: 57 SKDAVSGTLRLFWT----LLSKQEEMVQK------FVEEVLRINYKFLMSPIKTEQRQPS 106
Query: 1129 HNASGYFS----LYGDESEYAQQFSARLVTGNTGELYA--RTGYLGFLRRTSPA------ 1176
Y LY D +A+ +RL + Y R L PA
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRL------QPYLKLRQA----LLELRPAKNVLID 156
Query: 1177 GVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGID 1236
GV G+ G + V A + ++ + + L N+ + V + +
Sbjct: 157 GVLGS----GKTWV----ALDVCLSYKVQCKMDF-KIFWLNLKNCNSPETVLEM----LQ 203
Query: 1237 LICAFYGCLYVGAVPVTIRPPHPQN-LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKE 1295
+ + + + +Q L + +LVL N +++ +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN------VQNAK 257
Query: 1296 ASNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVT 1355
A N ++ +L T T L+ +H ++
Sbjct: 258 AWNAFNLSC-KILLTTRF------------------------KQVTDFLSAATTTHISLD 292
Query: 1356 SLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWL 1415
+ L P +L ++ +P + NP L
Sbjct: 293 HHSMT------LTPDEVKSL---------LLKYLDCRPQD------LPREVLTTNP-RRL 330
Query: 1416 S----AVSQYRVR-DTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRI 1470
S ++ D + +L T + S+ L+ AE R
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKL-TTIIESSLNVLEP--------------AEYR--- 372
Query: 1471 HLTSAFSKLFSALGLSPRAVSTSFGCRVNI---AICL--QGASSPEPSCVYVDLRALRND 1525
K+F L + P + +I + L + V L
Sbjct: 373 -------KMFDRLSVFPPS--------AHIPTILLSLIWFDVIKSDVMVVVNKLH----- 412
Query: 1526 RVSLVERGSP------HSLCLLESGKL--LPGV-KVIIAN-PETKGQCGDSHLGEIWVQS 1575
+ SLVE+ S+ L KL + + I+ + K D
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD-------LI 465
Query: 1576 PHNASGYFSLY-G---DESEYAQQFSARLVTGNTGELYARTGYLGF------LRRTSPAG 1625
P YF + G E+ ++ L+ R +L F +R S A
Sbjct: 466 PPYLDQYFYSHIGHHLKNIEHPERM----------TLF-RMVFLDFRFLEQKIRHDSTAW 514
Query: 1626 VAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-- 1683
A + ++ L L+ + + D + R I + F
Sbjct: 515 NASGSI---LNTLQQ-------------LKFYKPYICDNDPKYERLVNAILD---FLPKI 555
Query: 1684 -TNLLVVVVELDGNESEALDLVPLV----TNAVLEEHHLIV 1719
NL+ S+ DL+ + A+ EE H V
Sbjct: 556 EENLI---------CSKYTDLLRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 9e-06
Identities = 87/597 (14%), Positives = 155/597 (25%), Gaps = 222/597 (37%)
Query: 233 FVTEHLAKTPKDWAPQPRLTDDTPAYIEY--TTDRDGSVMG-VTVTRAAMLSHCR-ALTQ 288
F+ + + QP + T YIE D V V+R R AL +
Sbjct: 93 FLMSPIKTEQR----QP--SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE 146
Query: 289 ACHYTEGENMV------C---VL------DFKRETGL-----WHSV-----LTSVLNGMH 323
+N++ + +K + + W ++ +VL +
Sbjct: 147 L---RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 324 AVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGD 383
+ + N S + + + +++ LL +K ++ LLV
Sbjct: 204 KLL---YQIDPNWTSRSDHSSNIKLRIHSIQAELRR--LLKSKPYE-------NCLLVLL 251
Query: 384 GANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMS 443
N + + + F K L ++ R V +S
Sbjct: 252 --NVQNAKAWNAFN--LSCKIL----------------LTTRF---KQV------TDFLS 282
Query: 444 GLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTG 503
+ + +D + +LT DEV + +
Sbjct: 283 AATTTHISLDHHSM--TLT--------------------------PDEVKSLLLKYLDCR 314
Query: 504 SQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLG-FLGPGGLVFVCGSRDGLMTVT 562
Q LP P LS ++ + RDGL T
Sbjct: 315 PQ--DLP---REVLTTNPR-----RLS--------IIAESI-----------RDGLATWD 345
Query: 563 GRKHNADD----IIATVLAV-EP--MKFIYRGRIAVF------SIRVLRDERICVI-AEQ 608
KH D II + L V EP + ++ R++VF +L +I +
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFD-RLSVFPPSAHIPTILL-----SLIWFDV 399
Query: 609 RPDCSEEESFQWMSRVLQAVD------SIHQVGLYCLALV-------------------- 642
+ L SI +Y V
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIP--SIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 643 --PPNYLPKTPLG-------GIHLSECKR--------------RFLEGNLHPANVLLCPH 679
+ L L G HL + RFLE + +
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS 517
Query: 680 TCVTN----LPKPREIHSGNCLAGQCKRR------FLEGNLHPANVLLCPHTCVTNL 726
+ N L + N + +R FL N++ +T + +
Sbjct: 518 GSILNTLQQLKFYKPYICDND--PKYERLVNAILDFLPK--IEENLICSKYTDLLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-05
Identities = 63/426 (14%), Positives = 112/426 (26%), Gaps = 128/426 (30%)
Query: 35 LPEFYEDDDIELEIAANPKD-PNAPKPEGGVMTPAPGESLVVPSGLPRNLEAA------I 87
F ++ D KD + PK +++ + ++ + +
Sbjct: 26 EDAFVDNFDC--------KDVQDMPKS---ILSKEEIDHII---MSKDAVSGTLRLFWTL 71
Query: 88 QRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDR 147
+ V VL N Y L+S + T+ + + + R
Sbjct: 72 LSKQEEMVQKFVEEVLRIN--------YKFLMSP-------IKTEQRQPSMMTRMYIEQR 116
Query: 148 IALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQI------------GFLL 195
L ND F A Y V P + ++ G
Sbjct: 117 DRL---YNDNQVF--AKY--------NVSRLQPYLKLRQALLELRPAKNVLIDGVLGS-- 161
Query: 196 G-SCDIQVALTSDACL-KGLPKTAAGEVVAFKGWPKL-----TWFVTEHL----AKTPKD 244
G + + D CL + ++ F W L V E L + +
Sbjct: 162 GKTW-----VALDVCLSYKVQCKMDFKI--F--WLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 245 WAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAML---------------SHCRAL-TQ 288
W + + + I ++ +L C+ L T
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT- 271
Query: 289 ACHYTEGENMVCVLDFKRET---------GLWH----SVLTSVLNGMHAVYIPYALMKVN 335
T + + L T L S+L L+ +P ++ N
Sbjct: 272 ----TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-CRPQDLPREVLTTN 326
Query: 336 PASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQ 395
P + +I S+ + +W + I SSL +L P
Sbjct: 327 PRR-LSIIA---ESIRDGLATWDNWKHVNCDKLTTIIESSLNVL------EPAEYRKMFD 376
Query: 396 FLSVFQ 401
LSVF
Sbjct: 377 RLSVFP 382
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 1e-04
Identities = 73/555 (13%), Positives = 156/555 (28%), Gaps = 170/555 (30%)
Query: 1269 VRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSW--------------PTILDTD-D 1313
+ + D+ KS+L S + + ++ SK+A + W +L +
Sbjct: 35 CKDVQDMPKSIL--SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92
Query: 1314 MPKKKLAALYRAPTAEMLAYLDF-SVSTTGMLAGIKMSHAAVTSLCRSMKL---ACELYP 1369
+ R P+ Y++ K + V+ L +KL EL P
Sbjct: 93 FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN---VSRLQPYLKLRQALLELRP 149
Query: 1370 SRHIALCLDPYCG-LGFALWVL-SSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTF 1427
++++ + G LG + V + ++ WL+ + +T
Sbjct: 150 AKNVLID-----GVLGSGKTWVALDVCLSYKVQCKMDFKI-----FWLN-LKNCNSPET- 197
Query: 1428 CSYGVME----LCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLF--S 1481
V+E L + P +R+ ++ + + R L SK +
Sbjct: 198 ----VLEMLQKLLYQ----IDPNWTSRSDHSSNIKLRIHSIQAELRRLL---KSKPYENC 246
Query: 1482 ALGL----SPRAVST-SFGCRV-----NIAICLQGASSPEPSCVYVD-LRALRNDRVSLV 1530
L L + +A + + C++ + D L A +SL
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQV--------------TDFLSAATTTHISLD 292
Query: 1531 ERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASG----YFSLY 1586
+L E LL +K + C L P S+
Sbjct: 293 HH--SMTLTPDEVKSLL--LKYL--------DCRPQDL-------PREVLTTNPRRLSII 333
Query: 1587 GDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFV-V 1645
E + A + + KL + +
Sbjct: 334 A---ESIRDGLATW------DNWKHVNC---------------------DKLTTIIESSL 363
Query: 1646 GALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFT--WTNLLVVVVELDGNESEALDL 1703
L+ + + + SV I + + W +++ V + N+ L
Sbjct: 364 NVLEPAEYRK--MFDRL----SVFPPSAHIPT-ILLSLIWFDVIKSDVMVVVNKLHKYSL 416
Query: 1704 VPL-VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR-------------DGFLA 1749
V + + + + + V ++ + +H D +
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLE----------NEYALHRSIVDHYNIPKTFDSDDLIP 466
Query: 1750 DQLDP---IYVAYNM 1761
LD ++ +++
Sbjct: 467 PYLDQYFYSHIGHHL 481
|
| >3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 2e-12
Identities = 53/321 (16%), Positives = 102/321 (31%), Gaps = 49/321 (15%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L R L +Q + + A + L+Y +L S +A L
Sbjct: 32 LTRILTVGVQSHPHSL-----AIICGE-----RQLSYIELDRLSTNLATRLA-------- 73
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
E L GD + PN F F+ + AG+V + + + + +
Sbjct: 74 EKGLGKGDTALVQLPNV--AEFYIVFFALLKAGVVVLNALYSHRQYE-----LNAFIKQI 126
Query: 199 DIQVALTSD--------ACLKGL-PKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQP 249
++ + S + L + E++ + + + + + +
Sbjct: 127 QPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQATDFGLLDWIETPAETFVDFS 186
Query: 250 RLTDDTPAYIEY---TTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKR 306
D A+ + +T G+ + T RA + C ++C L
Sbjct: 187 STPADEVAFFQLSGGST---GTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPH 243
Query: 307 ETGL-WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASV-AVVKSRDLHWGLLA 364
L L + G V P P + +I +++ ++ ++V S L
Sbjct: 244 NFMLSSPGALGVLHAGGCVVMAPNP----EPLNCFSIIQRHQVNMASLVPS--AVIMWLE 297
Query: 365 TKDHKDISLSSLRLLLVGDGA 385
+ SL+LL VG GA
Sbjct: 298 KAAQYKDQIQSLKLLQVG-GA 317
|
| >3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 3e-05
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 866
L+ +L + + + L E+ + GD + P + F+ L G V + H
Sbjct: 56 LSYIELDRLSTNLATRLAEKG-LGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNALYSH 114
|
| >3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 3e-05
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
L+ +L + + + L E+ + GD + P + F+ L G V + H
Sbjct: 56 LSYIELDRLSTNLATRLAEKG-LGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNALYSH 114
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 3e-11
Identities = 77/474 (16%), Positives = 139/474 (29%), Gaps = 131/474 (27%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L + I + + + P G TY + S ++A
Sbjct: 63 LHDYIFQNISEFATKP-----CLINGPTGH---VYTYSDVHVISRQIAANF--------H 106
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ + D + L+ PN F+ +F F G T + I +
Sbjct: 107 KLGVNQNDVVMLLLPNC--PEFVLSFLAASFRGATATAANPFFTPAE-----IAKQAKAS 159
Query: 199 DIQVALTSDACLKGLPKTAAGEVV--------AFKGWPKLTWFVTEHLAKTPK--DWAPQ 248
+ ++ +T + + + V P+ TE T + +
Sbjct: 160 NTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASEVIDS 219
Query: 249 PRLTDDTPAYIEY---TTDRDGSVMGVTVTRAAMLSH----------CRALTQACHYTEG 295
++ D + Y TT G GV ML+H ++
Sbjct: 220 VEISPDDVVALPYSSGTT---GLPKGV------MLTHKGLVTSVAQQVDGENPNLYFHSD 270
Query: 296 ENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRAS------ 349
+ ++CVL L +L + G + +P K +++I + + +
Sbjct: 271 DVILCVLPMFHIYALNSIMLCGLRVGAAILIMP----KFEINLLLELIQRCKVTVAPMVP 326
Query: 350 ---VAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQF------LSVF 400
+A+ KS + + D LSS+R++ GA P D +
Sbjct: 327 PIVLAIAKSSET--------EKYD--LSSIRVVKS--GAAPLGKELEDAVNAKFPNAKLG 374
Query: 401 QSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTS 460
Q G+ +E V G A + G +
Sbjct: 375 QGYGM-----------TEAGPVLAMSLGFAKEPFPVK---------SG--------A--- 403
Query: 461 LTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQ----YWGLP 510
CG V+ M +V D+ L ++ GEIC+ G Q Y P
Sbjct: 404 -----CGTVVRNAEMKIVDPDTGDSL-SRNQPGEICI----RGHQIMKGYLNNP 447
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-09
Identities = 37/238 (15%), Positives = 85/238 (35%), Gaps = 20/238 (8%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP- 1257
T S +H + ++ A + +N D V L+ P + + +F + GA P
Sbjct: 89 YTYSDVHVISRQIAANF-HKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFF 147
Query: 1258 HPQNLQ--------TTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTIL 1309
P + + T VD K + ++ + ++ + +
Sbjct: 148 TPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELT 207
Query: 1310 DTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHA---AVTSLCRSMKLACE 1366
+ + + ++ +P + + L +S TTG+ G+ ++H + +
Sbjct: 208 QSTTEASEVIDSVEISP--DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL 265
Query: 1367 LYPSRHIALCLDPYC-GLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 1423
+ S + LC+ P +L + G +++P E+ L L + + +V
Sbjct: 266 YFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEIN----LLLELIQRCKV 319
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 8e-05
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 807 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 864
T S +H + ++ A + +N D V L+ P + + +F + GA P
Sbjct: 89 YTYSDVHVISRQIAANF-HKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANP 145
|
| >3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 2e-09
Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 36/289 (12%)
Query: 103 LDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLC 162
++ GK + + +L S + A L + L+ GDR+A+V P +
Sbjct: 65 VNGKGK-ELMWNFRELSENSQQAANVL-------SGACGLQRGDRVAVVLPRV--PEWWL 114
Query: 163 AFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG--- 219
GCI AG++ +P + + D I + L + + D ++ + A+
Sbjct: 115 VILGCIRAGLIFMPGTIQMKSTD-----ILYRLQMSKAKAIVAGDEVIQEVDTVASECPS 169
Query: 220 --EVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRA 277
+ W + L + I +T+ G + +
Sbjct: 170 LRIKLLVSEKSCDGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYS 229
Query: 278 AMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPA 337
++ + + M + D + S++ G ++ + L K +P
Sbjct: 230 SLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALG-ACTFV-HLLPKFDPL 287
Query: 338 SWMQMITKYRASV------AVVKSRDLHWGLLATKDHKDISLSSLRLLL 380
++ ++ Y + +L +D L+ +
Sbjct: 288 VILKTLSSYPIKSMMGAPIV--------YRMLLQQDLSSYKFPHLQNCV 328
|
| >3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 7e-06
Identities = 39/253 (15%), Positives = 93/253 (36%), Gaps = 27/253 (10%)
Query: 1190 VDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGA 1249
V+ + + +L + +++ +L + GD VA++ P + GC+ G
Sbjct: 65 VNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGL 124
Query: 1250 VPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQ-------NVIKLLKSKEASNVVDI 1302
+ + P +Q + + +SK+ +++ V S +V
Sbjct: 125 IFM------PGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSE 178
Query: 1303 KSWPTILDTDDMPKKKLAALYRAPT-AEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM 1361
KS L+ + + + T ++ + + F+ T+G+ + S++++ +
Sbjct: 179 KSCDGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMD 238
Query: 1362 KLACELYPSRHIALCL-DPYCGLGFALWVLSSVYS----GHHSILIPPSEVEVNPALWLS 1416
L S I + D G+ L +L S+ G + + +P + L
Sbjct: 239 AGWTGLQASD-IMWTISDT----GWILNILCSLMEPWALG-ACTFVHLLP-KFDPLVILK 291
Query: 1417 AVSQYRVRDTFCS 1429
+S Y ++ +
Sbjct: 292 TLSSYPIK-SMMG 303
|
| >3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 4e-05
Identities = 44/307 (14%), Positives = 85/307 (27%), Gaps = 53/307 (17%)
Query: 104 DPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCA 163
D G T+ L S K A + + GD + L + +F
Sbjct: 79 DDYGN-EKIFTFKDLKYYSDKAANFF--------VKHGIGKGDYVMLTLKSR--YDFWYC 127
Query: 164 FYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTS---------DACLKGLP 214
G G + VP L RD I + + +++ + D
Sbjct: 128 MLGLHKLGAIAVPATHMLKTRD-----IVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECG 182
Query: 215 KTAAGEVV----AFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYT---TDRDG 267
+ +GW + E + +D + ++ G
Sbjct: 183 DIPLKKAKVGGDVLEGWIDFRKELEESSPIFERPTGEVSTKNED-ICLVYFSSGTA---G 238
Query: 268 SVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYI 327
V L H + + V D +W + + G AV++
Sbjct: 239 FPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYTVADSGWGKCVWGKLYGQWIAG-CAVFV 297
Query: 328 PYALMKVNPASWMQMITKYRASV------AVVKSRDLHWGLLATKDHKDISLSSLRLLL- 380
Y + + ++ +KY + + L +D + S+L+ +
Sbjct: 298 -YDYDRFEAKNMLEKASKYGVTTFCAPPTI--------YRFLIKEDLSHYNFSTLKYAVV 348
Query: 381 VGDGANP 387
G+ NP
Sbjct: 349 AGEPLNP 355
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-04
Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 19/168 (11%)
Query: 1197 QLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256
Q L+ +L + A R+ L + G VAL ++L+ G L GA + + P
Sbjct: 488 QTLSYRELDEEANRIARRLQKHG-AGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDP 546
Query: 1257 PHPQNLQTTLPTVR---MIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDD 1313
P++ R M+ D S + +L++Q + + + T +
Sbjct: 547 KLPED--------RISYMLAD-SAAACLLTHQEMKEQAAELPYTGTTLFIDDQTRFEEQA 597
Query: 1314 MPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM 1361
+ A AY+ ++ TTG G +HA + L + +
Sbjct: 598 ------SDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGLVKHV 639
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 9e-04
Identities = 31/167 (18%), Positives = 49/167 (29%), Gaps = 19/167 (11%)
Query: 1193 RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPV 1252
R + QL AE++ LLE G + + + I L G +
Sbjct: 47 RDRFGSVDYRQLLDSAEQLSDYLLEHY-PQPGVCLGVYGEYSRESITCLLAILLSGHHYL 105
Query: 1253 TIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTD 1312
I P + L+L +
Sbjct: 106 YIDLKQPA------AWNAELCRQVDCRLILDCSTTPTPANG------------LPCVPVR 147
Query: 1313 DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR 1359
+P + A+ +AY++FS TTG I +HA +T LC
Sbjct: 148 HLPAAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCL 194
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1761 | |||
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 100.0 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 100.0 | |
| 1amu_A | 563 | GRSA, gramicidin synthetase 1; peptide synthetase, | 100.0 | |
| 3ni2_A | 536 | 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy | 100.0 | |
| 4fuq_A | 503 | Malonyl COA synthetase; ANL superfamily, methylma | 100.0 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 100.0 | |
| 3r44_A | 517 | Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s | 100.0 | |
| 3etc_A | 580 | AMP-binding protein; adenylate-forming acyl-COA sy | 100.0 | |
| 1mdb_A | 539 | 2,3-dihydroxybenzoate-AMP ligase; adenylation doma | 100.0 | |
| 3g7s_A | 549 | Long-chain-fatty-acid--COA ligase (FADD-1); protei | 100.0 | |
| 4gr5_A | 570 | Non-ribosomal peptide synthetase; MBTH-like domain | 100.0 | |
| 1t5h_X | 504 | 4-chlorobenzoyl COA ligase; adenylate-forming coen | 100.0 | |
| 1pg4_A | 652 | Acetyl-COA synthetase; AMP-forming, adenylate-form | 100.0 | |
| 3e7w_A | 511 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 100.0 | |
| 3o83_A | 544 | Peptide arylation enzyme; ligase, adenylation of 2 | 100.0 | |
| 3fce_A | 512 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 3c5e_A | 570 | Acyl-coenzyme A synthetase ACSM2A, mitochondrial; | 100.0 | |
| 3ivr_A | 509 | Putative long-chain-fatty-acid COA ligase; structu | 100.0 | |
| 2d1s_A | 548 | Luciferase, luciferin 4-monooxygenase; alpha/beta, | 100.0 | |
| 1v25_A | 541 | Long-chain-fatty-acid-COA synthetase; ligase, stru | 100.0 | |
| 3ni2_A | 536 | 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy | 100.0 | |
| 3l8c_A | 521 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 3kxw_A | 590 | Saframycin MX1 synthetase B; fatty acid AMP ligase | 100.0 | |
| 3rix_A | 550 | Luciferase, luciferin 4-monooxygenase; oxidoreduct | 100.0 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 100.0 | |
| 4fuq_A | 503 | Malonyl COA synthetase; ANL superfamily, methylma | 100.0 | |
| 2v7b_A | 529 | Benzoate-coenzyme A ligase; benzoate oxidation, be | 100.0 | |
| 1mdb_A | 539 | 2,3-dihydroxybenzoate-AMP ligase; adenylation doma | 100.0 | |
| 3nyq_A | 505 | Malonyl-COA ligase; A/B topology ababa sandwich be | 100.0 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 100.0 | |
| 3ipl_A | 501 | 2-succinylbenzoate--COA ligase; structural genomic | 100.0 | |
| 1ry2_A | 663 | Acetyl-coenzyme A synthetase 1, acyl-activating en | 100.0 | |
| 3g7s_A | 549 | Long-chain-fatty-acid--COA ligase (FADD-1); protei | 100.0 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 100.0 | |
| 4gr5_A | 570 | Non-ribosomal peptide synthetase; MBTH-like domain | 100.0 | |
| 1amu_A | 563 | GRSA, gramicidin synthetase 1; peptide synthetase, | 100.0 | |
| 3kxw_A | 590 | Saframycin MX1 synthetase B; fatty acid AMP ligase | 100.0 | |
| 3r44_A | 517 | Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s | 100.0 | |
| 1t5h_X | 504 | 4-chlorobenzoyl COA ligase; adenylate-forming coen | 100.0 | |
| 3etc_A | 580 | AMP-binding protein; adenylate-forming acyl-COA sy | 100.0 | |
| 3o83_A | 544 | Peptide arylation enzyme; ligase, adenylation of 2 | 100.0 | |
| 3rix_A | 550 | Luciferase, luciferin 4-monooxygenase; oxidoreduct | 100.0 | |
| 1pg4_A | 652 | Acetyl-COA synthetase; AMP-forming, adenylate-form | 100.0 | |
| 2d1s_A | 548 | Luciferase, luciferin 4-monooxygenase; alpha/beta, | 100.0 | |
| 3ite_A | 562 | SIDN siderophore synthetase; ligase, non-ribosomal | 100.0 | |
| 3c5e_A | 570 | Acyl-coenzyme A synthetase ACSM2A, mitochondrial; | 100.0 | |
| 3ivr_A | 509 | Putative long-chain-fatty-acid COA ligase; structu | 100.0 | |
| 3e7w_A | 511 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 1v25_A | 541 | Long-chain-fatty-acid-COA synthetase; ligase, stru | 100.0 | |
| 3gqw_A | 576 | Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen | 100.0 | |
| 3fce_A | 512 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 3nyq_A | 505 | Malonyl-COA ligase; A/B topology ababa sandwich be | 100.0 | |
| 1ry2_A | 663 | Acetyl-coenzyme A synthetase 1, acyl-activating en | 100.0 | |
| 3l8c_A | 521 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 100.0 | |
| 2v7b_A | 529 | Benzoate-coenzyme A ligase; benzoate oxidation, be | 100.0 | |
| 3ipl_A | 501 | 2-succinylbenzoate--COA ligase; structural genomic | 100.0 | |
| 3gqw_A | 576 | Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen | 100.0 | |
| 3ite_A | 562 | SIDN siderophore synthetase; ligase, non-ribosomal | 100.0 | |
| 3t5a_A | 480 | Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C | 100.0 | |
| 3t5a_A | 480 | Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C | 100.0 | |
| 4gs5_A | 358 | Acyl-COA synthetase (AMP-forming)/AMP-acid ligase | 100.0 | |
| 4gs5_A | 358 | Acyl-COA synthetase (AMP-forming)/AMP-acid ligase | 100.0 | |
| 2y4o_A | 443 | Phenylacetate-coenzyme A ligase; phenylacetic acid | 100.0 | |
| 3qov_A | 436 | Phenylacetate-coenzyme A ligase; acetyl-COA synthe | 100.0 | |
| 2y27_A | 437 | Phenylacetate-coenzyme A ligase; phenylacetic acid | 100.0 | |
| 3qov_A | 436 | Phenylacetate-coenzyme A ligase; acetyl-COA synthe | 100.0 | |
| 2y4o_A | 443 | Phenylacetate-coenzyme A ligase; phenylacetic acid | 100.0 | |
| 2y27_A | 437 | Phenylacetate-coenzyme A ligase; phenylacetic acid | 100.0 | |
| 3hgu_A | 369 | EHPF; phenazine, antibiotic, biosynthetic protein; | 99.96 | |
| 3hgu_A | 369 | EHPF; phenazine, antibiotic, biosynthetic protein; | 99.94 | |
| 3lax_A | 109 | Phenylacetate-coenzyme A ligase; structural genomi | 99.34 | |
| 3gxs_A | 109 | Phenylacetate-coenzyme A ligase; APC62324.1, struc | 99.3 | |
| 3lax_A | 109 | Phenylacetate-coenzyme A ligase; structural genomi | 99.27 | |
| 3gxs_A | 109 | Phenylacetate-coenzyme A ligase; APC62324.1, struc | 99.21 | |
| 4b2g_A | 609 | GH3-1 auxin conjugating enzyme; signaling protein, | 98.46 | |
| 4eql_A | 581 | 4-substituted benzoates-glutamate ligase GH3.12; f | 98.37 | |
| 4epl_A | 581 | Jasmonic acid-amido synthetase JAR1; ANL adenylati | 98.29 | |
| 4b2g_A | 609 | GH3-1 auxin conjugating enzyme; signaling protein, | 98.17 | |
| 4eql_A | 581 | 4-substituted benzoates-glutamate ligase GH3.12; f | 98.12 | |
| 4epl_A | 581 | Jasmonic acid-amido synthetase JAR1; ANL adenylati | 98.02 |
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-80 Score=878.81 Aligned_cols=542 Identities=17% Similarity=0.233 Sum_probs=448.7
Q ss_pred chhhhHHHHHHHHhccCCCCCCCcccccCcHHHHHHhcCCCCCCCCCCCCCCcCCCCCCccccCCCcchhHHHHHHHHhh
Q psy14338 13 RWKVSAKIQQLLNTLKRPKRRPLPEFYEDDDIELEIAANPKDPNAPKPEGGVMTPAPGESLVVPSGLPRNLEAAIQRYGS 92 (1761)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~a~ 92 (1761)
..++..+|.+++..+...+..++.+.......+.......+++..... ...+++++|+++++
T Consensus 414 i~~l~~~~~~lL~~l~~~p~~~~~~~~~l~~~e~~~~~~~~~~~~~~~------------------~~~~l~~~~~~~~~ 475 (1304)
T 2vsq_A 414 ILRLKSQLLTAIQQLIQNPDQPVSTINLVDDREREFLLTGLNPPAQAH------------------ETKPLTYWFKEAVN 475 (1304)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSBGGGCCCCCHHHHHHHHTTTSCCCCCC------------------CCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCccccccccCCCCHHHHHHHHHhcCCCCCCC------------------CCCCHHHHHHHHHH
Confidence 356778888888888777777777766555444433233333321100 02579999999999
Q ss_pred hcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHHHHHHHhCC
Q psy14338 93 ATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGI 172 (1761)
Q Consensus 93 ~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~lAvlkaG~ 172 (1761)
++||++|+++++ +++||+||+++++++|++|+ +.|+++|++|+|+++|| +++++++|||+|+|+
T Consensus 476 ~~p~~~Av~~~~------~~lTY~eL~~~a~~lA~~L~--------~~Gv~~g~~V~i~~~~s--~~~vv~~lailkaG~ 539 (1304)
T 2vsq_A 476 ANPDAPALTYSG------QTLSYRELDEEANRIARRLQ--------KHGAGKGSVVALYTKRS--LELVIGILGVLKAGA 539 (1304)
T ss_dssp HCTTSEEEESSS------CEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEECCCSS--HHHHHHHHHHHHTTC
T ss_pred hCCCCeEEEECC------eeEcHHHHHHHHHHHHHHHH--------hcCcCCcCEEEEEeCCC--HHHHHHHHHHHHHCC
Confidence 999999999765 58999999999999999999 89999999999999999 999999999999999
Q ss_pred eEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-cceeccCCCcceeEEeccccCCCCCCCCCCCC
Q psy14338 173 VPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-EVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRL 251 (1761)
Q Consensus 173 ~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (1761)
+||||||.+|.+ |+.+|+++++++++|++......+...... ..+..++. ..... ....+....
T Consensus 540 ~~vpldp~~p~~-----rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~ 604 (1304)
T 2vsq_A 540 AYLPVDPKLPED-----RISYMLADSAAACLLTHQEMKEQAAELPYTGTTLFIDDQ--------TRFEE--QASDPATAI 604 (1304)
T ss_dssp EEEECCTTSCHH-----HHHHHHHHHTCCEEEECSTTCTTSTTCCCCSEEEESSCG--------GGGGS--CSSCCCCCC
T ss_pred EEEEECCCCHHH-----HHHHHHHHcCCCEEEECcchhhhhhccCCCCcEEEeccc--------ccccc--ccCCCCCCC
Confidence 999999999976 999999999999999998765543322111 11111100 00011 111223346
Q ss_pred CCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCcc
Q psy14338 252 TDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYAL 331 (1761)
Q Consensus 252 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~ 331 (1761)
.|+++|||+|||||||+||||+++|+++++. .+....++++++|++++++|++||+++++ +|.+|+.|+++|++++..
T Consensus 605 ~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~l~~G~~l~~~~~~~ 682 (1304)
T 2vsq_A 605 DPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFSDQDTFLSVSNYAFDAFTFD-FYASMLNAARLIIADEHT 682 (1304)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCCTTCEEEECSCTTSTHHHHH-HHHHHTTTCEEEECCGGG
T ss_pred CCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCCCCCEEEEECCccHHHHHHH-HHHHHHcCCEEEECChhh
Confidence 7899999999999999999999999999876 45556678999999999999999999996 999999999999998654
Q ss_pred ccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccc
Q psy14338 332 MKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAIC 411 (1761)
Q Consensus 332 ~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~ 411 (1761)
..++..+.+.|++++||+++++| +++..+.... ...+++||.+++| ||+++++++++|.+.++.. +++
T Consensus 683 -~~~~~~l~~~i~~~~vt~~~~~p-~~~~~l~~~~---~~~~~~lr~~~~g--Ge~l~~~~~~~~~~~~~~~-----~l~ 750 (1304)
T 2vsq_A 683 -LLDTERLTDLILQENVNVMFATT-ALFNLLTDAG---EDWMKGLRCILFG--GERASVPHVRKALRIMGPG-----KLI 750 (1304)
T ss_dssp -TTCHHHHHHHHHHHTCCEEEEEH-HHHHHHHHHC---SHHHHTCSEEEEE--SSCCCHHHHHHHHHHHCTT-----CEE
T ss_pred -cCCHHHHHHHHHHcCCcEEEccH-HHHHHHHhhc---hhcCCCccEEEEe--cCCCCHHHHHHHHHhCCCC-----EEE
Confidence 67999999999999999999996 4777665432 2236789999999 9999999999999987532 499
Q ss_pred cccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCC
Q psy14338 412 PCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDE 491 (1761)
Q Consensus 412 n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~ 491 (1761)
|+||||||+++++..... .........+||+|++|++++|+|++++ +||.|+
T Consensus 751 n~YG~TE~~~~~~~~~~~--------------------------~~~~~~~~~~iG~p~~~~~~~i~d~~~~--~~p~G~ 802 (1304)
T 2vsq_A 751 NCYGPTEGTVFATAHVVH--------------------------DLPDSISSLPIGKPISNASVYILNEQSQ--LQPFGA 802 (1304)
T ss_dssp EEECCGGGSSCSEEEECC--------------------------CCCSSCSSCCCBEECTTEEEEEECTTSC--BCCTTC
T ss_pred EeEChhHHhHHheeeecc--------------------------CccccCCCCCCceeeCCCEEEEECCCcC--CCCCCC
Confidence 999999999876654311 0001223578999999999999999987 699999
Q ss_pred ceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHH
Q psy14338 492 VGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDI 571 (1761)
Q Consensus 492 ~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eI 571 (1761)
+|||||+|+++++||+|+|++|+++|+++||.+ ++|||||||+|||++||+|+|+||+|+|||+||+||||+||
T Consensus 803 ~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~------g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rie~~eI 876 (1304)
T 2vsq_A 803 VGELCISGMGVSKGYVNRADLTKEKFIENPFKP------GETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIELEEI 876 (1304)
T ss_dssp CEEEEEEETTCCCCBTTCHHHHHHHEEECTTST------TCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHH
T ss_pred ceEEEEeccccCccccCCcccchhhhccCCCCC------CCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEeeCHHHH
Confidence 999999999999999999999999999999853 37999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCC
Q psy14338 572 IATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKT 650 (1761)
Q Consensus 572 E~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t 650 (1761)
|++|.++++| .+|+|++.++ .+++.++||++.....+.++++++|+++||.||+|+.+ +.+++||+|
T Consensus 877 E~~l~~~p~V-----~~a~V~~~~~~~~~~~l~a~vv~~~~~~~~~l~~~l~~~Lp~ymvP~~~-------~~l~~lP~t 944 (1304)
T 2vsq_A 877 EKQLQEYPGV-----KDAVVVADRHESGDASINAYLVNRTQLSAEDVKAHLKKQLPAYMVPQTF-------TFLDELPLT 944 (1304)
T ss_dssp HHHHHHSSSC-----CEEEEEEECCSSSCCEEEEEEECSSSSCHHHHHHHHHHHSCGGGSCSEE-------EEESCCCCC
T ss_pred HHHHHhCCCC-----ceEEEEEEecCCCCEEEEEEEeCCCCCCHHHHHHHHHHhChHhhhccEE-------EEecccCCC
Confidence 9999999988 6999999875 46678999999888888999999999999999999986 566999999
Q ss_pred CCCcccHHHHHHH
Q psy14338 651 PLGGIHLSECKRR 663 (1761)
Q Consensus 651 ~~GKidR~~L~~~ 663 (1761)
+||||||++|++.
T Consensus 945 ~~GKidR~~L~~~ 957 (1304)
T 2vsq_A 945 TNGKVNKRLLPKP 957 (1304)
T ss_dssp SSCSSCCSCCCCC
T ss_pred CCcccCHhhcCCc
Confidence 9999999998754
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-79 Score=804.55 Aligned_cols=489 Identities=16% Similarity=0.159 Sum_probs=406.8
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..+++++|+++|+++||++|+++++ +++||+||+++++++|++|+ +.|+++|++|+|+++|| ++
T Consensus 26 ~~tl~~~~~~~a~~~Pd~~Av~~~~------~~lTY~eL~~~a~~lA~~L~--------~~Gv~~g~~V~i~~~~s--~~ 89 (620)
T 4dg8_A 26 HPTVVARFSEMAALHPHREAIRDRF------GSVDYRQLLDSAEQLSDYLL--------EHYPQPGVCLGVYGEYS--RE 89 (620)
T ss_dssp SCCHHHHHHHHHHHCTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HHCCSSCCEEEEESSSC--HH
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCC------CcCcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HH
Confidence 4689999999999999999999866 69999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
+++++|||+|+|++||||||.+|.+ |+.+++++++++++|+++.......... ... .....
T Consensus 90 ~vva~lailkaGa~~vpld~~~p~~-----~l~~il~~~~~~~vl~~~~~~~~~~~~~---~~~-----------~~~~~ 150 (620)
T 4dg8_A 90 SITCLLAILLSGHHYLYIDLKQPAA-----WNAELCRQVDCRLILDCSTTPTPANGLP---CVP-----------VRHLP 150 (620)
T ss_dssp HHHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTEEEEEECCSSCCCCTTSC---EEE-----------GGGCC
T ss_pred HHHHHHHHHHhCCEEEeeCccChHH-----HHHHHHHhCCCcEEEecCcccccccCCc---eee-----------eccCC
Confidence 9999999999999999999999976 9999999999999997765433221110 000 01111
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHh
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVL 319 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~ 319 (1761)
.. ..........++|+|||+|||||||+||||+++|+++.+.+.+ ...++++++|++++++|++|++++++ +|.+|+
T Consensus 151 ~~-~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~ 227 (620)
T 4dg8_A 151 AA-PASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAATLE-IWGALL 227 (620)
T ss_dssp CC-CCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHHHH-HHHHHT
T ss_pred cC-CccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHHHH-HHHHHh
Confidence 11 1111223457899999999999999999999999999887765 55678999999999999999999996 999999
Q ss_pred cCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHH
Q psy14338 320 NGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSV 399 (1761)
Q Consensus 320 ~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~ 399 (1761)
.|+++++.+.. .+++..+.+.|+++++|+++++| +++..++... ...+++||.+++| ||+++++.+++|.+.
T Consensus 228 ~G~~~v~~~~~--~~~~~~~~~~i~~~~vt~~~~~P-s~~~~l~~~~---~~~l~~lr~v~~g--Ge~l~~~~~~~~~~~ 299 (620)
T 4dg8_A 228 NGGCCVLNDLG--PLDPGVLRQLIGERGADSAWLTA-SLFNTLVDLD---PDCLGGLRQLLTG--GDILSVPHVRRALLR 299 (620)
T ss_dssp TTCEEEECCSS--SCCHHHHHHHHHTTCCCEEEEEH-HHHHHHHHHC---GGGGTTCSEEEEE--SSCCCHHHHHHHHHH
T ss_pred cCCEEEeCccc--cCCHHHHHHHHHHhCCcEEEccH-HHHHHHHhcC---hhhCCCccEEEEE--eCcCCHHHHHHHHHh
Confidence 99999997532 67999999999999999999996 4777776532 3467899999999 999999999999887
Q ss_pred hhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe
Q psy14338 400 FQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK 479 (1761)
Q Consensus 400 ~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d 479 (1761)
++. + +++|.||+||++++++..... .........++|+|++|++++|+|
T Consensus 300 ~~~--~---~l~n~YG~TE~~~~~~~~~~~--------------------------~~~~~~~~~~iG~p~~~~~~~i~d 348 (620)
T 4dg8_A 300 HPR--L---HLVNGYGPTENTTFTCCHVVT--------------------------DDDLEEDDIPIGKAIAGTAVLLLD 348 (620)
T ss_dssp CTT--C---EEEEEECCGGGCSCSEEEECC--------------------------TGGGGSSSCCCBEECTTEEEEEEC
T ss_pred CCC--e---EEEeeEchhhhhhheEEEecc--------------------------ccccCCCCCCceecccCcEEEEEC
Confidence 653 3 599999999998766543311 000122457899999999999999
Q ss_pred CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeE
Q psy14338 480 MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLM 559 (1761)
Q Consensus 480 ~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 559 (1761)
+++++ ++|.|++|||||+|+++++||||+|++|+++|+.+|+... ..|||||||+|++++||+|+|+||+||||
T Consensus 349 ~~~~~-~~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~-----~~~~yrTGDl~~~~~dG~l~~~GR~dd~I 422 (620)
T 4dg8_A 349 EHGQE-IAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGR-----LLRAYRTGDRARYDEQGRLRFIGRGDGQV 422 (620)
T ss_dssp TTSCB-CCSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTE-----EEEEEEEEEEEEECTTSCEEEEECSSSEE
T ss_pred ccCCC-CCCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCC-----CceEEeCCCEEEECCCCeEEEEccCCCEE
Confidence 99984 5899999999999999999999999999999999885211 13899999999999999999999999999
Q ss_pred EECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeEE
Q psy14338 560 TVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCL 639 (1761)
Q Consensus 560 ki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~v 639 (1761)
|++|+||+|+|||++|.+++.| .+|+|++.++.....++++++... ++++++++++||.||+|+.+
T Consensus 423 k~~G~ri~~~eIE~~l~~~p~V-----~~a~Vv~~~~~~~~~lv~~~~~~~----~~~~~~l~~~Lp~y~~P~~~----- 488 (620)
T 4dg8_A 423 KLNGYRLDLPALEQRFRRQPGI-----LDCALLVRERNGVKQLLCAWTGKA----DASPQALLRQLPTWQRPHAC----- 488 (620)
T ss_dssp EETTEEEEHHHHHHHHHTSTTE-----EEEEEEEEEETTEEEEEEEEEECT----TCCCHHHHHHSCGGGSCSEE-----
T ss_pred EECCEEcCHHHHHHHHHhCCCc-----cEEEEEEEeCCCceEEEEEEecCh----HHHHHHHHHhChhhcCCcEE-----
Confidence 9999999999999999999888 799999988766566777666543 33456778899999999986
Q ss_pred EEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 640 ALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 640 ~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
+.+++||+|+||||||++|++.+.+.
T Consensus 489 --~~v~~lP~t~~GKidR~~L~~~~~~~ 514 (620)
T 4dg8_A 489 --VRVEALPLTAHGKLDRAALLRRLEEP 514 (620)
T ss_dssp --EECSSCCCC----CCHHHHHHHTCSC
T ss_pred --EEECcCCCCcccCHhHHHHhhccccc
Confidence 66799999999999999999887543
|
| >1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-76 Score=762.68 Aligned_cols=487 Identities=15% Similarity=0.200 Sum_probs=409.6
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|+++++++||++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ +++
T Consensus 39 ~~l~~~l~~~a~~~p~~~Al~~~~------~~~Ty~eL~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e~ 102 (563)
T 1amu_A 39 KTIHQLFEEQVSKRPNNVAIVCEN------EQLTYHELNVKANQLARIFI--------EKGIGKDTLVGIMMEKS--IDL 102 (563)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HHH
T ss_pred CcHHHHHHHHHHHCCCCeEEEeCC------ceecHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHH
Confidence 579999999999999999999754 69999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-cceeccCCCcceeEEecccc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-EVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (1761)
++++|||+++|+++||+||.++.+ |+.+++++++++++|+++.....+...... .+.... .+...
T Consensus 103 ~~~~lA~~~~Gav~vpl~~~~~~~-----~l~~il~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 168 (563)
T 1amu_A 103 FIGILAVLKAGGAYVPIDIEYPKE-----RIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFE---------EDTIK 168 (563)
T ss_dssp HHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEEECC---------CSTTT
T ss_pred HHHHHHHHHhCCEEEEeCCCCcHH-----HHHHHHHhcCCCEEEEcCchhhhhhhccccCceeeec---------chhhc
Confidence 999999999999999999999976 999999999999999998654332221110 011100 00011
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHh
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVL 319 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~ 319 (1761)
.. ..........++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++|+++++. ++.+|+
T Consensus 169 ~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~ 246 (563)
T 1amu_A 169 IR-EGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWE-MFMALL 246 (563)
T ss_dssp TS-CCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHH-HHHHHT
T ss_pred cc-cCccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHH-HHHHHH
Confidence 00 1111223456899999999999999999999999999999998888899999999999999999999985 999999
Q ss_pred cCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHH
Q psy14338 320 NGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSV 399 (1761)
Q Consensus 320 ~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~ 399 (1761)
.|+++++.+... .+++..+++.|+++++|++.++| +++..+.. ..+++||.+++| |+++++++.++|.+.
T Consensus 247 ~G~~~v~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~------~~~~~lr~~~~g--G~~l~~~~~~~~~~~ 316 (563)
T 1amu_A 247 TGASLYIILKDT-INDFVKFEQYINQKEITVITLPP-TYVVHLDP------ERILSIQTLITA--GSATSPSLVNKWKEK 316 (563)
T ss_dssp TTCEEEECCHHH-HTCHHHHHHHHHHTTCCEEEECH-HHHTTSCT------TTCCSCSEEEEE--SSCCCHHHHHHHTTT
T ss_pred CCCEEEEcChHh-hcCHHHHHHHHHHcCCcEEEeCH-HHHHHHHh------cccccccEEEEE--EecCCHHHHHHHHhC
Confidence 999999988432 37899999999999999999986 46655432 246899999999 999999999998764
Q ss_pred hhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe
Q psy14338 400 FQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK 479 (1761)
Q Consensus 400 ~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d 479 (1761)
+ .++|.||+||++++++..... ........++|+|++|++++|+|
T Consensus 317 ~--------~~~~~YG~TE~~~~~~~~~~~---------------------------~~~~~~~~~vG~p~~~~~v~i~d 361 (563)
T 1amu_A 317 V--------TYINAYGPTETTICATTWVAT---------------------------KETIGHSVPIGAPIQNTQIYIVD 361 (563)
T ss_dssp S--------EEEEEECCGGGSSCSEEEECC---------------------------SSCCCSSCCCBEECTTEEEEEEC
T ss_pred C--------eEEEEECcCHHhHhheeeecc---------------------------cccCCCCCcccceeCCCEEEEEC
Confidence 2 499999999998655433211 00012356899999999999999
Q ss_pred CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeE
Q psy14338 480 MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLM 559 (1761)
Q Consensus 480 ~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 559 (1761)
++++ ++|.|++|||+|+|+++++||||+|++|+++|..+|+.. +++||||||+|++|+||+|+|+||+||||
T Consensus 362 ~~~~--~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~------g~~w~~TGDlg~~d~dG~l~i~GR~~d~I 433 (563)
T 1amu_A 362 ENLQ--LKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVP------GEKLYKTGDQARWLSDGNIEYLGRIDNQV 433 (563)
T ss_dssp TTSC--BCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSST------TSEEEEEEEEEEECTTSCEEEEEEGGGEE
T ss_pred CCcC--CCCCCCcEEEEEechhhChhhCCCchhhhhhcccCCCCC------CCEEEecCCEEEEcCCCeEEEeccccCEE
Confidence 9987 599999999999999999999999999999999888753 37899999999999999999999999999
Q ss_pred EECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeE
Q psy14338 560 TVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYC 638 (1761)
Q Consensus 560 ki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~ 638 (1761)
|++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|+++.....+.++++++|+++||.||+|..+
T Consensus 434 k~~G~~V~p~eIE~~l~~~p~V-----~~a~Vv~~~~~~~~~~~~a~vv~~~~~~~~~l~~~l~~~L~~y~~P~~i---- 504 (563)
T 1amu_A 434 KIRGHRVELEEVESILLKHMYI-----SETAVSVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEELPTYMIPSYF---- 504 (563)
T ss_dssp EETTEEEEHHHHHHHHTTSTTE-----EEEEEEEEECTTSCEEEEEEEEESSCCCHHHHHHHHHHHSCGGGSCSEE----
T ss_pred EECCEEeCHHHHHHHHHhCCCc-----ceEEEEEeecCCCCeEEEEEEEeCCCCCHHHHHHHHHhhCchhhCCcEE----
Confidence 9999999999999999998888 79999998854 6778999999887888999999999999999999986
Q ss_pred EEEeCCCCccCCCCCcccHHHHHHHH
Q psy14338 639 LALVPPNYLPKTPLGGIHLSECKRRF 664 (1761)
Q Consensus 639 v~~v~~~~lP~t~~GKidR~~L~~~~ 664 (1761)
+.+++||+|+||||||++|++..
T Consensus 505 ---~~v~~lP~t~~GKi~r~~L~~~~ 527 (563)
T 1amu_A 505 ---IQLDKMPLTSNGKIDRKQLPEPD 527 (563)
T ss_dssp ---EECSSCCBCTTSSBCGGGSCCCC
T ss_pred ---EEecccCCCCCcChhHHhcCCcc
Confidence 55699999999999999998643
|
| >3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-75 Score=753.16 Aligned_cols=502 Identities=19% Similarity=0.260 Sum_probs=420.8
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|.++++++|+++|+++.+. | +++||+||+++++++|+.|+ +.|+++||+|+|+++|| +++
T Consensus 22 ~~l~~~l~~~a~~~p~~~a~~~~~~-~---~~~Ty~el~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~~~--~~~ 87 (536)
T 3ni2_A 22 LPLHSYVLENLSNHSSKPCLINGAN-G---DVYTYADVELTARRVASGLN--------KIGIQQGDVIMLFLPSS--PEF 87 (536)
T ss_dssp CCHHHHHTTTGGGSTTSEEEEETTT-C---CEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HHH
T ss_pred CcHHHHHHHHhhcCCCceEEEECCC-C---CEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCc--HHH
Confidence 5799999999999999999987532 2 58999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc---cccceeccCCCcceeEEecc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA---AGEVVAFKGWPKLTWFVTEH 237 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 237 (1761)
++++|||+|+|+++||+||.++.+ |+.+++++++++++|+++...+.+.... ...++..+..... ....+.
T Consensus 88 ~~~~la~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 161 (536)
T 3ni2_A 88 VLAFLGASHRGAIITAANPFSTPA-----ELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDG-CLHFSE 161 (536)
T ss_dssp HHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCCCTT-CEETHH
T ss_pred HHHHHHHHHhCCEEeccCCCCCHH-----HHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCCCCC-ccCHHH
Confidence 999999999999999999999976 9999999999999999987654433221 1112222211111 001111
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH----HcCCCCCCeEEEccCCcchhhhHHH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ----ACHYTEGENMVCVLDFKRETGLWHS 313 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~ 313 (1761)
+........+.....++|+|||+|||||||+||||+++|+++++.+.+... .+++.++|++++++|++|++++...
T Consensus 162 ~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~ 241 (536)
T 3ni2_A 162 LTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSI 241 (536)
T ss_dssp HHTSCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHT
T ss_pred HhhccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHH
Confidence 111111122334567899999999999999999999999999988776653 4568899999999999999999766
Q ss_pred HHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 314 i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
++.+|..|+++++.+ .+++..+++.|+++++|++.++| +++..++........++++||.+++| ||++++++.
T Consensus 242 ~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~l~~lr~i~~g--Ge~l~~~~~ 314 (536)
T 3ni2_A 242 MLCGLRVGAPILIMP----KFEIGSLLGLIEKYKVSIAPVVP-PVMMSIAKSPDLDKHDLSSLRMIKSG--GAPLGKELE 314 (536)
T ss_dssp HHHHHHHTCCEEECS----SCCHHHHHHHHHHHTCCEEEECH-HHHHHHHTCSCGGGSCCTTCCEEEEE--SSCCCHHHH
T ss_pred HHHHHhcCCEEEEcC----CCCHHHHHHHHHHhCCeEEEccH-HHHHHHHhCcccccCCCccceEEEEC--CCCCCHHHH
Confidence 899999999999998 68999999999999999999996 58888888776667789999999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
++|.+.++.. .++|.||+||++.+++..... .........+++|+|++|+
T Consensus 315 ~~~~~~~~~~-----~l~~~YG~TE~~~~~~~~~~~-------------------------~~~~~~~~~~~~G~~~~~~ 364 (536)
T 3ni2_A 315 DTVRAKFPQA-----RLGQGYGMTEAGPVLAMCLAF-------------------------AKEPFDIKPGACGTVVRNA 364 (536)
T ss_dssp HHHHHHCTTS-----EEEEEEECGGGSSEEEECGGG-------------------------SSSCCCCCTTCCCEECSSC
T ss_pred HHHHHHCCCC-----Cccccccccccchhhhccccc-------------------------CCccccCCCCCeeEeCCCc
Confidence 9999988532 599999999998765533210 0001123467899999999
Q ss_pred EEEEEeCC-CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEE
Q psy14338 474 IMTVVKMD-SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552 (1761)
Q Consensus 474 ~~~I~d~~-~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~ 552 (1761)
+++|+|++ ++ ++|.|++|||+|+|+++++||||+|+.|+++|. .+|||||||+|++++||+|+|+
T Consensus 365 ~~~i~d~~~~~--~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~------------~~g~~~TGDl~~~~~dG~l~~~ 430 (536)
T 3ni2_A 365 EMKIVDPETGA--SLPRNQPGEICIRGDQIMKGYLNDPEATSRTID------------KEGWLHTGDIGYIDDDDELFIV 430 (536)
T ss_dssp EEEEECTTTCC--BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBC------------TTSCEEEEEEEEECTTSCEEEE
T ss_pred EEEEEeCCCCc--CCCCCCccEEEEeCcccchhhcCChhHHHhhcc------------CCCceEcccEEEEcCCceEEEE
Confidence 99999965 54 699999999999999999999999999999993 4799999999999999999999
Q ss_pred eccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhh
Q psy14338 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQAVD 629 (1761)
Q Consensus 553 GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~ 629 (1761)
||+|||||++|+||+|.|||++|.+++.| .+|+|++.++ ..++.++|+++..++ .+.++++++|+++||.||
T Consensus 431 GR~dd~ik~~G~~v~p~eIE~~l~~~p~V-----~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~l~~~~ 505 (536)
T 3ni2_A 431 DRLKELIKYKGFQVAPAELEALLIAHPEI-----SDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEIKQYISKQVIFYK 505 (536)
T ss_dssp EECSCCEEETTEEECHHHHHHHHHTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHTTSCGGG
T ss_pred ecccceEEECCEEECHHHHHHHHHhCCCc-----ceEEEEeeecCCCCceeEEEEEecCCCCCCHHHHHHHHHHhccCCc
Confidence 99999999999999999999999999888 7999999985 467889999997654 678999999999999999
Q ss_pred hcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 630 SIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 630 ~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+|..+ +.+++||+|+||||||++|++.+.
T Consensus 506 ~p~~i-------~~v~~lP~t~~GKi~R~~L~~~~~ 534 (536)
T 3ni2_A 506 RIKRV-------FFIEAIPKAPSGKILRKNLKEKLA 534 (536)
T ss_dssp CCSEE-------EECSCCCBCTTSCBCHHHHHTC--
T ss_pred cccEE-------EEEecCCCCCCCCeeHHHHHHHhc
Confidence 99986 556999999999999999998664
|
| >4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-75 Score=749.17 Aligned_cols=490 Identities=17% Similarity=0.261 Sum_probs=413.5
Q ss_pred HHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHHHH
Q psy14338 85 AAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAF 164 (1761)
Q Consensus 85 ~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vva~ 164 (1761)
++|+++++++|+++|+...+.+| +++||+||+++++++|+.|+ ++|+++||+|+|+++|| +++++++
T Consensus 4 ~l~~~~a~~~p~~~a~~~~~~~~---~~~Ty~eL~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~~~--~~~~~~~ 70 (503)
T 4fuq_A 4 NLFARLFDKLDDPHKLAIETAAG---DKISYAELVARAGRVANVLV--------ARGLQVGDRVAAQTEKS--VEALVLY 70 (503)
T ss_dssp CHHHHHHSCCSCTTSEEEEETTC---CEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSC--HHHHHHH
T ss_pred hHHHHHHHhCCCCceEEEecCCC---cEEEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--HHHHHHH
Confidence 57889999999999998654334 58999999999999999999 88999999999999999 9999999
Q ss_pred HHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc---cceeccCCCcceeEEeccccCC
Q psy14338 165 YGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG---EVVAFKGWPKLTWFVTEHLAKT 241 (1761)
Q Consensus 165 lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 241 (1761)
|||+|+|+++||+||.+|.+ |+.+++++++++++|+++...+.+...... .+........ ... .+....
T Consensus 71 lA~~~~Ga~~vpl~~~~~~~-----~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~- 142 (503)
T 4fuq_A 71 LATVRAGGVYLPLNTAYTLH-----ELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPDGR-GSL-TDAAAG- 142 (503)
T ss_dssp HHHHHTTCEEEECCTTCCHH-----HHHHHHHHHCCSEEEECGGGTTTTHHHHHHHTCEEEECCTTSC-SHH-HHHHHT-
T ss_pred HHHHHcCcEEEecCCCCCHH-----HHHHHHHhcCCcEEEECchhhHHHHHHHhhcCceEEEecCCcc-ccc-chhhhc-
Confidence 99999999999999999976 999999999999999998765544332111 1111110000 000 000001
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcC
Q psy14338 242 PKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNG 321 (1761)
Q Consensus 242 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G 321 (1761)
...........++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++|+++++..++.+++.|
T Consensus 143 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g 222 (503)
T 4fuq_A 143 ASEAFATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFAR 222 (503)
T ss_dssp SCSCCCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTT
T ss_pred CCCCcCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhC
Confidence 11112233567899999999999999999999999999999999999999999999999999999999765578899999
Q ss_pred cEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhh
Q psy14338 322 MHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQ 401 (1761)
Q Consensus 322 ~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~ 401 (1761)
+++++.+ .+++..+++.++ ++|+++.+| +++..++.........+++||.+++| |+++++++.++|.+.+
T Consensus 223 ~~~~~~~----~~~~~~~~~~i~--~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~g--g~~l~~~~~~~~~~~~- 292 (503)
T 4fuq_A 223 GSMIFLP----KFDPDKILDLMA--RATVLMGVP-TFYTRLLQSPRLTKETTGHMRLFISG--SAPLLADTHREWSAKT- 292 (503)
T ss_dssp CEEEECS----SCCHHHHHHHHT--TCCEEEECH-HHHHHHHTCTTCSTTTTTTCCEEEEC--SSCCCHHHHHHHHHHH-
T ss_pred CEEEEcC----CCCHHHHHHHHh--hcCEEEEHH-HHHHHHHhCCCccccchhhcEEEEEC--CCCCCHHHHHHHHHHh-
Confidence 9999998 789999999998 899999996 58888888776667778999999999 9999999999999988
Q ss_pred hCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe-C
Q psy14338 402 SKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK-M 480 (1761)
Q Consensus 402 ~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~ 480 (1761)
|.+ ++|.||+||+++.++.... .....+++|+|++|++++|+| +
T Consensus 293 --~~~---~~~~YG~TE~~~~~~~~~~------------------------------~~~~~~~~G~p~~~~~~~i~d~~ 337 (503)
T 4fuq_A 293 --GHA---VLERYGMTETNMNTSNPYD------------------------------GDRVPGAVGPALPGVSARVTDPE 337 (503)
T ss_dssp --SCC---EEECCEETTTEECBCCCSS------------------------------SCCCTTEEEEBCTTCEEEEECTT
T ss_pred --CCC---ccceEcccccCcccccCCC------------------------------CCCcCCccccCCCCeEEEEEECC
Confidence 443 9999999999866442211 123457899999999999999 5
Q ss_pred CCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEE
Q psy14338 481 DSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMT 560 (1761)
Q Consensus 481 ~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvk 560 (1761)
+++ ++|.|++|||+|+|+++++||||+|++|+++|. .+|||||||+|++++||+|+|+||+|||||
T Consensus 338 ~g~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~------------~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik 403 (503)
T 4fuq_A 338 TGK--ELPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFR------------DDGFFITGDLGKIDERGYVHILGRGKDLVI 403 (503)
T ss_dssp TCC--BCCTTCCEEEEEESTTSCCCBTTCHHHHHHTBC------------TTSCEEEEEEEEECTTCEEEECCSSTTCEE
T ss_pred CCC--CCcCCCceEEEEECCchhhhhcCChhhhHhhhC------------CCCCeEcceeEEEcCCCcEEEEecCCCEEE
Confidence 555 699999999999999999999999999999995 378999999999999999999999999999
Q ss_pred ECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhhhcceeeee
Q psy14338 561 VTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMSRVLQAVDSIHQVGLY 637 (1761)
Q Consensus 561 i~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~~P~~i~~~ 637 (1761)
++|+||+|+|||++|.++++| .+|+|++.++ ..++.++++++..++ .+.++++++|+++||.||+|..+
T Consensus 404 ~~G~~v~p~eIE~~l~~~p~V-----~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i--- 475 (503)
T 4fuq_A 404 TGGFNVYPKEIESEIDAMPGV-----VESAVIGVPHADFGEGVTAVVVRDKGATIDEAQVLHGLDGQLAKFKMPKKV--- 475 (503)
T ss_dssp ETTEEECHHHHHHHHHTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHBTTBCGGGCCSEE---
T ss_pred ECCEEECHHHHHHHHHhCCCe-----eEEEEEEeEchhcCceeEEEEEeCCCCCCCHHHHHHHHHhhcccCCCCCEE---
Confidence 999999999999999998888 7999999985 467889999998654 67889999999999999999986
Q ss_pred EEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 638 CLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 638 ~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+.+++||+|+|||+||++|++.+.+
T Consensus 476 ----~~v~~lP~t~~GKi~R~~L~~~~~~ 500 (503)
T 4fuq_A 476 ----IFVDDLPRNTMGKVQKNVLRETYKD 500 (503)
T ss_dssp ----EEESCCCBCTTSCBCHHHHHHHTTT
T ss_pred ----EEECCCCCCcccceeHHHHHHHHHH
Confidence 4459999999999999999998753
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-75 Score=765.05 Aligned_cols=493 Identities=16% Similarity=0.185 Sum_probs=412.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..+++++|+++++ ||++|+++++ +++||+||+++++++|++|+ +.|+++|++|+|+++|| ++
T Consensus 26 ~~~l~~~~~~~a~--pd~~Av~~~~------~~lTY~eL~~~a~~lA~~L~--------~~Gv~~gd~V~l~~~~s--~~ 87 (617)
T 3rg2_A 26 DLPLTDILTRHAA--SDSIAVIDGE------RQLSYRELNQAADNLACSLR--------RQGIKPGETALVQLGNV--AE 87 (617)
T ss_dssp CCCTTHHHHTTTT--CCSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HH
T ss_pred cCCHHHHHHHhhC--CCCeEEecCC------ceEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCc--HH
Confidence 3579999999988 9999999766 79999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccc---------ccccceec-cCCCc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKT---------AAGEVVAF-KGWPK 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~---------~~~~~~~~-~~~~~ 229 (1761)
+++++|||+|+|+++||+||.+|.+ |+.+++++++++++|++.......... .....+.. .....
T Consensus 88 ~vva~lA~l~aG~~~vpl~~~~~~~-----~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (617)
T 3rg2_A 88 LYITFFALLKLGVAPVLALFSHQRS-----ELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGE 162 (617)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCCHH-----HHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCST
T ss_pred HHHHHHHHHhcCeEEccCCccccHH-----HHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccccc
Confidence 9999999999999999999999976 999999999999999987653111000 00000000 00000
Q ss_pred ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
..+ .+... .+..........++++|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|.++
T Consensus 163 ~~~--~~~~~-~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 239 (617)
T 3rg2_A 163 HNL--QDAIN-HPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYA 239 (617)
T ss_dssp TBH--HHHHH-SCCSSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHH
T ss_pred cch--hhhhc-ccccccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhh
Confidence 000 00001 111112233457899999999999999999999999999999999999999999999999999887766
Q ss_pred hHH-HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCceeEEEecCCCc
Q psy14338 310 LWH-SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLRLLLVGDGAN 386 (1761)
Q Consensus 310 ~~~-~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr~v~~gg~Ge 386 (1761)
+.. .+|.+|+.|+++++.+ ..++..+++.|+++++|++.++|+ ++..++.... ....++++||.+++| ||
T Consensus 240 ~~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~~~~~~~~~~l~~lr~i~~g--Ge 312 (617)
T 3rg2_A 240 MSSPGSLGVFLAGGTVVLAA----DPSATLCFPLIEKHQVNVTALVPP-AVSLWLQALIEGESRAQLASLKLLQVG--GA 312 (617)
T ss_dssp HHSSHHHHHHHHTCEEEECS----SCCHHHHHHHHHHTTCCEEEECHH-HHHHHHHHHHTTCCTTTTTTCCEEEEE--SS
T ss_pred hhHHHHHHHHHcCCEEEEeC----CCCHHHHHHHHHHhCCcEEEcchH-HHHHHHHhhhcccccccCCCccEEEEc--CC
Confidence 542 4899999999999988 578999999999999999999964 7666654322 223368999999999 99
Q ss_pred cCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCccccccc
Q psy14338 387 PWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDC 466 (1761)
Q Consensus 387 ~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 466 (1761)
++++++.++|.+.+ |. +++|.||+||+++.++..... ......++
T Consensus 313 ~l~~~~~~~~~~~~---~~---~~~~~YG~tE~~~~~~~~~~~-----------------------------~~~~~~~~ 357 (617)
T 3rg2_A 313 RLSATLAARIPAEI---GC---QLQQVFGMAEGLVNYTRLDDS-----------------------------AEKIIHTQ 357 (617)
T ss_dssp CCCHHHHHHHHHHT---CS---EEEEEEEETTEEEEECCTTSC-----------------------------HHHHHHCC
T ss_pred cCCHHHHHHHHHHh---CC---cEEEEeccCcceeecccCCCc-----------------------------ccccccCC
Confidence 99999999999987 44 399999999998655432210 11235689
Q ss_pred CCCC-CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC
Q psy14338 467 GQVM-PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545 (1761)
Q Consensus 467 G~p~-~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~ 545 (1761)
|+|+ ++++++|+|++++ ++|.|++|||||+|+++++||||+|++|+++|. .++||||||+|++++
T Consensus 358 G~p~~~~~~~~i~d~~~~--~~p~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~------------~~~~yrTGDl~~~~~ 423 (617)
T 3rg2_A 358 GYPMCPDDEVWVADAEGN--PLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFD------------ANGFYCSGDLISIDP 423 (617)
T ss_dssp CEESCTTCEEEEECTTSC--BCCTTCCEEEEEECSSSCSCCTTCHHHHHHHBC------------TTSCEEEEEEEEECT
T ss_pred CccCCCCceEEEECCCCC--CCCCCCceEEEecCccccchhcCChhhhhhccC------------CCCceecCceEEEcC
Confidence 9998 7889999999987 699999999999999999999999999999995 378999999999999
Q ss_pred CCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHH-
Q psy14338 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSR- 623 (1761)
Q Consensus 546 dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~- 623 (1761)
||+|+|+||+|||||++|+||+|+|||++|.+++.| .+|+|++.++. .++.+++|++..+..+.+++++++++
T Consensus 424 dG~l~~~GR~dd~iki~G~ri~~~eIE~~l~~~p~V-----~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~l~~~l~~~ 498 (617)
T 3rg2_A 424 EGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAV-----IYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQ 498 (617)
T ss_dssp TSCEEEEEECSSEEEETTEEEEHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEESSCCCHHHHHHHHHTT
T ss_pred CceEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCe-----eEEEEEeccCcccCeeEEEEEEeCCCCCHHHHHHHHHhC
Confidence 999999999999999999999999999999998888 69999998854 67889999999888899999999998
Q ss_pred HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 624 VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 624 ~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.||.||+|+.+ +.+++||+|+||||||++|++.+..
T Consensus 499 ~lp~~~vP~~~-------~~v~~lP~t~~GKidR~~L~~~~~~ 534 (617)
T 3rg2_A 499 GIAEFKLPDRV-------ECVDSLPLTAVGKVDKKQLRQWLAS 534 (617)
T ss_dssp TCCGGGSCSEE-------EECSCCCBCTTSSBCHHHHHHHHHH
T ss_pred CCccccCCcEE-------EEecccCCCCCCCCcHHHHHHHHhc
Confidence 69999999986 6679999999999999999998754
|
| >3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-74 Score=745.87 Aligned_cols=494 Identities=16% Similarity=0.263 Sum_probs=415.0
Q ss_pred cchhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCch
Q psy14338 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPI 158 (1761)
Q Consensus 79 ~~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~ 158 (1761)
...++.++|+++++++|+++|+++.+.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|| +
T Consensus 14 ~~~~l~~~l~~~a~~~p~~~A~~~~~~~----~~~Ty~eL~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~~~--~ 79 (517)
T 3r44_A 14 KMKNIGWMLRQRATVSPRLQAYVEPSTD----VRMTYAQMNALANRCADVLT--------ALGIAKGDRVALLMPNS--V 79 (517)
T ss_dssp GGGCHHHHHHHHHHHSTTSEEEEEGGGT----EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--H
T ss_pred cccCHHHHHHHHHHhCCCCeEEEeCCcC----ceeeHHHHHHHHHHHHHHHH--------HcCCCCcCEEEEEcCCC--H
Confidence 3578999999999999999999986422 58999999999999999999 89999999999999999 9
Q ss_pred hHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEE----
Q psy14338 159 NFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFV---- 234 (1761)
Q Consensus 159 ~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 234 (1761)
++++++|||+|+|+++|||||.+|.+ |+.+++++++++++|++......+......... ... ...+..
T Consensus 80 ~~~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~ 151 (517)
T 3r44_A 80 EFCCLFYGAAKLGAVAVPINTRLAAP-----EVSFILSDSGSKVVIYGAPSAPVIDAIRAQADP-PGT--VTDWIGADSL 151 (517)
T ss_dssp HHHHHHHHHHHHTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSC-CTT--CCEEEEHHHH
T ss_pred HHHHHHHHHHHhCcEEEecCcccCHH-----HHHHHHHhcCceEEEECCchHHHHHHHHhccCC-ccE--EEEccCcccH
Confidence 99999999999999999999999976 999999999999999998765433221110000 000 000000
Q ss_pred eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHH
Q psy14338 235 TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSV 314 (1761)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i 314 (1761)
.+..... ....+.....++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++|++++.. +
T Consensus 152 ~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~ 229 (517)
T 3r44_A 152 AERLRSA-AADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTT-V 229 (517)
T ss_dssp HHHHHHC-CCCCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHH-H
T ss_pred HHHhhcc-CcCCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHH-H
Confidence 0111111 1122334567899999999999999999999999999999999999999999999999999999999986 6
Q ss_pred HHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHH
Q psy14338 315 LTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCD 394 (1761)
Q Consensus 315 ~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~ 394 (1761)
+.+++.|+++++.+ .+++..+++.|+++++|++.++| +++..++..+.....++++||.+++| ||++++++.+
T Consensus 230 ~~~~~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~i~~g--Ge~l~~~~~~ 302 (517)
T 3r44_A 230 IFSAMRGVTLISMP----QFDATKVWSLIVEERVCIGGAVP-AILNFMRQVPEFAELDAPDFRYFITG--GAPMPEALIK 302 (517)
T ss_dssp HHHHHHTCEEEECS----SCCHHHHHHHHHHTTCCEEEECH-HHHHHHHHSHHHHHCCCTTCCEEEEC--SSCCCHHHHH
T ss_pred HHHHhcCeEEEEeC----CCCHHHHHHHHHHhCCeEEEeHH-HHHHHHHhCcccccCCCCcccEEEEC--CCCCCHHHHH
Confidence 66666999999998 68999999999999999999996 58888877665556678999999999 9999999999
Q ss_pred HHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcE
Q psy14338 395 QFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCI 474 (1761)
Q Consensus 395 ~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 474 (1761)
+|.+. |+ .++|.||+||++..++..... ......+++|+|+++++
T Consensus 303 ~~~~~----~~---~~~~~YG~TE~~~~~~~~~~~----------------------------~~~~~~~~~G~~~~~~~ 347 (517)
T 3r44_A 303 IYAAK----NI---EVVQGYALTESCGGGTLLLSE----------------------------DALRKAGSAGRATMFTD 347 (517)
T ss_dssp HHHHT----TC---EEEEEEECGGGTTCEEEECGG----------------------------GTTTTTTCCBEECTTEE
T ss_pred HHHhc----CC---cEEEeecccccccceeecCCc----------------------------cccccCCCCCcCCCCeE
Confidence 99875 44 499999999998766543311 00234678999999999
Q ss_pred EEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEec
Q psy14338 475 MTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGS 554 (1761)
Q Consensus 475 ~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR 554 (1761)
++|+|+++. ++|.| .|||+|+|+++++||||+|++|+++|. +|||||||+|++++||+|+|+||
T Consensus 348 ~~i~d~~~~--~~~~g-~GEl~v~g~~v~~GY~~~p~~t~~~f~-------------~g~~~TGDl~~~~~dG~l~~~GR 411 (517)
T 3r44_A 348 VAVRGDDGV--IREHG-EGEVVIKSDILLKEYWNRPEATRDAFD-------------NGWFRTGDIGEIDDEGYLYIKDR 411 (517)
T ss_dssp EEEECTTSC--EESSE-EEEEEEEETTSCSEETTCHHHHHHTEE-------------TTEEEEEEEEEECTTSCEEEEEC
T ss_pred EEEECCCCC--CCCCC-CeEEEEeCcchhhhhCCChhhhHhhhc-------------CCCEecceeEEEcCCeeEEEecC
Confidence 999999986 58888 899999999999999999999999994 79999999999999999999999
Q ss_pred cCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeC-CCCCHHHHHHHHHHHHHHhhhcc
Q psy14338 555 RDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQR-PDCSEEESFQWMSRVLQAVDSIH 632 (1761)
Q Consensus 555 ~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~-~~~~~~~l~~~l~~~Lp~y~~P~ 632 (1761)
+|||||++|+||+|.|||++|.++++| .+|+|++.++. .++.+++++... ...+.++++++|+++||.||+|.
T Consensus 412 ~dd~ik~~G~~v~p~eIE~~l~~~p~V-----~~~~Vv~~~~~~~g~~~~a~v~~~~~~~~~~~l~~~l~~~L~~~~~P~ 486 (517)
T 3r44_A 412 LKDMIISGGENVYPAEIESVIIGVPGV-----SEVAVIGLPDEKWGEIAAAIVVADQNEVSEQQIVEYCGTRLARYKLPK 486 (517)
T ss_dssp GGGCEEETTEEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTTCCHHHHHHHHHHHSCGGGSCS
T ss_pred CcCEEEECCEEECHHHHHHHHHhCCCE-----eEEEEEeccccccCceEEEEEECCCCCCCHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998888 79999999854 567777777543 34788999999999999999999
Q ss_pred eeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 633 QVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 633 ~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.+ +.+++||+|+||||||++|++.+.+
T Consensus 487 ~i-------~~v~~lP~t~~GKi~R~~L~~~~~~ 513 (517)
T 3r44_A 487 KV-------IFAEAIPRNPTGKILKTVLREQYSA 513 (517)
T ss_dssp EE-------EECSCCCBCTTCCBCHHHHHHHHGG
T ss_pred EE-------EEECCCCCCCCcCccHHHHHHHHHh
Confidence 86 5569999999999999999999864
|
| >3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-74 Score=745.68 Aligned_cols=500 Identities=16% Similarity=0.211 Sum_probs=398.5
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
...+++|+++|+++||++|+++.+.+|.. +++||+||+++++++|++|+ +.|+++||+|+|+++|+ +++
T Consensus 56 n~~~~~l~~~a~~~pd~~Al~~~~~~g~~-~~~Ty~eL~~~~~~~A~~L~--------~~Gv~~Gd~V~l~~~~~--~e~ 124 (580)
T 3etc_A 56 NFAYDVVDVYARDSPEKLAMIWCDDYGNE-KIFTFKDLKYYSDKAANFFV--------KHGIGKGDYVMLTLKSR--YDF 124 (580)
T ss_dssp CHHHHTHHHHHHHCTTCEEEEEEESSSCE-EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECTTC--THH
T ss_pred hHHHHHHHHHHhhCCCCEEEEEEcCCCCE-eEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHH
Confidence 45679999999999999999987654433 78999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEccccc--ccCccccc------ccceeccCCCccee
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACL--KGLPKTAA------GEVVAFKGWPKLTW 232 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~--~~~~~~~~------~~~~~~~~~~~~~~ 232 (1761)
++++|||+|+|+++||++|.++.+ ++.+++++++++++|++.... ..+..... ...+.........+
T Consensus 125 ~~~~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (580)
T 3etc_A 125 WYCMLGLHKLGAIAVPATHMLKTR-----DIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGDVLEGW 199 (580)
T ss_dssp HHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSSCCTTC
T ss_pred HHHHHHHHhCCEEEEeCCccCCHH-----HHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCcccccc
Confidence 999999999999999999999976 899999999999999987643 22211100 01111111100111
Q ss_pred EE-eccccCCCCCCCCC---CCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchh
Q psy14338 233 FV-TEHLAKTPKDWAPQ---PRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET 308 (1761)
Q Consensus 233 ~~-~~~~~~~~~~~~~~---~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 308 (1761)
.. .+............ ....++|+|||+|||||||+||||+++|+++++.+......+++.+++++++.+|++|+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (580)
T 3etc_A 200 IDFRKELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYTVADSGWGK 279 (580)
T ss_dssp EEHHHHHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEEECCCTTSTH
T ss_pred ccHHHHHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEEEeCChHHHH
Confidence 11 11111111111111 246789999999999999999999999999998888777778999999999999999999
Q ss_pred hhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 309 GLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 309 ~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
+++..++.+++.|+++++.+.. .+++..+++.|+++++|+++++| +++..++.. .....++++||.+++| ||++
T Consensus 280 ~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~-~~~~~~l~~lr~i~~g--Ge~l 353 (580)
T 3etc_A 280 CVWGKLYGQWIAGCAVFVYDYD--RFEAKNMLEKASKYGVTTFCAPP-TIYRFLIKE-DLSHYNFSTLKYAVVA--GEPL 353 (580)
T ss_dssp HHHHTTHHHHHTTCEEEEEECS--SCCHHHHHHHHHHHTCCEEEECH-HHHHHHHTS-CC---CCTTCCEEEEC--SSCC
T ss_pred HHHHHHHHHHhCCcEEEEecCC--CCCHHHHHHHHHHHCCeEEEccH-HHHHHHHhc-ccccCCCccceEEEEc--cCCC
Confidence 9986688999999999998532 78999999999999999999985 577777664 4445678999999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++++.++|.+.+ |++ ++|.||+||+++.++..+.. ..+.+++|+
T Consensus 354 ~~~~~~~~~~~~---g~~---i~~~YG~TE~~~~~~~~~~~------------------------------~~~~~~~G~ 397 (580)
T 3etc_A 354 NPEVFNRFLEFT---GIK---LMEGFGQTETVVTIATFPWM------------------------------EPKPGSIGK 397 (580)
T ss_dssp CHHHHHHHHHHH---SCC---CEEEECCTTSSCCEECCTTS------------------------------CCCTTCCBE
T ss_pred CHHHHHHHHHHh---CCe---EecccccccccceeecCCCC------------------------------CCCCCcccc
Confidence 999999999988 554 99999999998766544321 124678999
Q ss_pred CCCCcEEEEEeCCCCcccCCCCCceEEEEec-----CCccccccCCCccccccccccccccCCCccCCCceEeecceEEE
Q psy14338 469 VMPGCIMTVVKMDSPSYLCKTDEVGEICVAS-----TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFL 543 (1761)
Q Consensus 469 p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G-----~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~ 543 (1761)
|++|++++|+|++++ +||.|+.|||+|+| +++++||+|+|++|+++|. +|||||||+|++
T Consensus 398 p~~~~~v~ivd~~g~--~~~~g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~-------------~gwy~TGDlg~~ 462 (580)
T 3etc_A 398 PTPGYKIELMDRDGR--LCEVGEEGEIVINTMEGKPVGLFVHYGKDPERTEETWH-------------DGYYHTGDMAWM 462 (580)
T ss_dssp ECTTCEEEEECTTSC--BCCTTCCEEEEEECTTCCCTTCCCEETTCHHHHHHHEE-------------TTEEEEEEEEEE
T ss_pred CCCCCEEEEECCCCC--CCCCCCceEEEEecCCCCCCeeeccccCCHhHHHhhcC-------------CCEEecCcEEEE
Confidence 999999999999987 69999999999997 8899999999999999995 789999999999
Q ss_pred eCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCC-----HHHH
Q psy14338 544 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCS-----EEES 617 (1761)
Q Consensus 544 ~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~-----~~~l 617 (1761)
|+||+|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|+++..++.. .+++
T Consensus 463 d~dG~l~~~GR~dd~Ik~~G~~I~p~eIE~~l~~~p~V-----~~a~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l 537 (580)
T 3etc_A 463 DEDGYLWFVGRADDIIKTSGYKVGPFEVESALIQHPAV-----LECAITGVPDPVRGQVIKATIVLTKDYTPSDSLKNEL 537 (580)
T ss_dssp CTTSCEEEEEESSSCEEETTEEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHH
T ss_pred CCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCe-----eeEEEEeeeccCCCcEEEEEEEECCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999998888 79999999864 6788999999876632 3689
Q ss_pred HHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 618 FQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 618 ~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
+++|+++||.||+|..+ +.+++||+|+||||||++|++++.
T Consensus 538 ~~~l~~~l~~~~~P~~i-------~~v~~lP~t~sGKi~R~~Lr~~~~ 578 (580)
T 3etc_A 538 QDHVKNVTAPYKYPRII-------EFVPELPKTISGKIRRVEIRDKDQ 578 (580)
T ss_dssp HHHHHHHSCGGGCCSEE-------EEECC-------------------
T ss_pred HHHHHhhCCCccCCeEE-------EEeCCCCCCCCcCCcHHHHHhHhh
Confidence 99999999999999986 445999999999999999998765
|
| >1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-74 Score=745.21 Aligned_cols=492 Identities=16% Similarity=0.199 Sum_probs=415.0
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|+++++++||++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|| +++
T Consensus 25 ~tl~~~l~~~a~~~p~~~A~~~~~------~~~Ty~eL~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~~~--~~~ 88 (539)
T 1mdb_A 25 ETFGDLLRDRAAKYGDRIAITCGN------THWSYRELDTRADRLAAGFQ--------KLGIQQKDRVVVQLPNI--KEF 88 (539)
T ss_dssp CCHHHHHHHHHHHHTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEECCCSS--HHH
T ss_pred CCHHHHHHHHHHHCCCCEEEEeCC------CcccHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCc--HHH
Confidence 579999999999999999999755 69999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccc-----cCccc----cc-ccceeccCCCcc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLK-----GLPKT----AA-GEVVAFKGWPKL 230 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~-----~~~~~----~~-~~~~~~~~~~~~ 230 (1761)
++++|||+|+|+++||++|.++.+ |+.+++++++++++|+++.... .+... .. ..++......
T Consensus 89 ~~~~lA~~~~Ga~~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 161 (539)
T 1mdb_A 89 FEVIFALFRLGALPVFALPSHRSS-----EITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAE-- 161 (539)
T ss_dssp HHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCT--
T ss_pred HHHHHHHHHcCeEEecCCCCCCHH-----HHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCcc--
Confidence 999999999999999999999976 9999999999999999876321 00000 00 0111111100
Q ss_pred eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhh
Q psy14338 231 TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
.+ .+... ............++|+|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|++++
T Consensus 162 ~~--~~~~~-~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~ 238 (539)
T 1mdb_A 162 EF--LPLED-LHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPL 238 (539)
T ss_dssp TS--EEGGG-CCCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHH
T ss_pred ch--hhhhh-ccccccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchh
Confidence 01 01111 1111112234678999999999999999999999999999999998889999999999999999999998
Q ss_pred HH-HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCC
Q psy14338 311 WH-SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWS 389 (1761)
Q Consensus 311 ~~-~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~ 389 (1761)
.. .++.+|+.|+++++.+ .+++..+++.|+++++|++.++| +++..++........++++||.+++| |++++
T Consensus 239 ~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~l~~lr~~~~g--G~~l~ 311 (539)
T 1mdb_A 239 SSPGVLGVLYAGGRVVLSP----SPSPDDAFPLIEREKVTITALVP-PLAMVWMDAASSRRDDLSSLQVLQVG--GAKFS 311 (539)
T ss_dssp HSSHHHHHHHTTCEEEECS----SSSHHHHHHHHHHHTCSEEEECH-HHHHHHHHHHHHCCCCCTTCCEEEEE--SSCCC
T ss_pred hHHHHHHHHHhCCEEEECC----CCCHHHHHHHHHHcCCeEEEccH-HHHHHHHhCccccCCCccceeEEEEc--CCCCC
Confidence 73 4899999999999988 67999999999999999999996 47777776544445678999999999 99999
Q ss_pred HHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCC
Q psy14338 390 LSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQV 469 (1761)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 469 (1761)
+++.++|.+.+ |. .++|.||+||+++.++.... .......++|+|
T Consensus 312 ~~~~~~~~~~~---~~---~~~~~YG~TE~~~~~~~~~~-----------------------------~~~~~~~~~G~p 356 (539)
T 1mdb_A 312 AEAARRVKAVF---GC---TLQQVFGMAEGLVNYTRLDD-----------------------------PEEIIVNTQGKP 356 (539)
T ss_dssp HHHHTTHHHHT---CS---EEEEEEECTTSCEEECCTTS-----------------------------CHHHHHHCCCEE
T ss_pred HHHHHHHHHHh---CC---cEEEEEcCCCCcccccCCCC-----------------------------cHHhcCCCCCcc
Confidence 99999999987 44 39999999997654432110 011245789999
Q ss_pred CCC-cEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 470 MPG-CIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 470 ~~~-~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
+++ .+++|+|++++ ++|.|++|||+|+|+++++||||+|++|+++|. .+|||||||+|++++||+
T Consensus 357 ~~~~~~~~i~d~~~~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~------------~~g~~~TGDlg~~~~dG~ 422 (539)
T 1mdb_A 357 MSPYDESRVWDDHDR--DVKPGETGHLLTRGPYTIRGYYKAEEHNAASFT------------EDGFYRTGDIVRLTRDGY 422 (539)
T ss_dssp SSTTCEEEEECTTSC--BCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBC------------TTSCEEEEEEEEECTTSC
T ss_pred cCCCceEEEECCCCC--CCcCCCcceEEeeCcccchhhcCChhhhhhhcc------------CCCCeecCceEEECCCCc
Confidence 976 48999999987 599999999999999999999999999999995 378999999999999999
Q ss_pred EEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC-CCCHHHHHHHHHHH-H
Q psy14338 549 VFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP-DCSEEESFQWMSRV-L 625 (1761)
Q Consensus 549 l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~-~~~~~~l~~~l~~~-L 625 (1761)
|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|++++.. ..+.++++++|+++ |
T Consensus 423 l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V-----~~a~vv~~~~~~~g~~~~a~vv~~~~~~~~~~l~~~l~~~~L 497 (539)
T 1mdb_A 423 IVVEGRAKDQINRGGEKVAAEEVENHLLAHPAV-----HDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERGL 497 (539)
T ss_dssp EEEEEEGGGCEECSSCEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEESSSCCCHHHHHHHHHHTTC
T ss_pred EEEeccccceEEECCEEECHHHHHHHHHhCCCc-----ceEEEEeccccccCceEEEEEEECCCCCCHHHHHHHHHhCCC
Confidence 999999999999999999999999999998888 79999999864 6788999998764 46789999999998 9
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
|.||+|+.+ +.+++||+|+||||||++|++.+.+
T Consensus 498 ~~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 531 (539)
T 1mdb_A 498 AAYKIPDRV-------EFVESFPQTGVGKVSKKALREAISE 531 (539)
T ss_dssp CGGGSCSEE-------EECSSCCBCTTSCBCHHHHHHHHHH
T ss_pred CcccCCCEE-------EEeccCCCCCCcCEeHHHHHHHHHH
Confidence 999999986 5569999999999999999998753
|
| >3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-75 Score=754.07 Aligned_cols=510 Identities=16% Similarity=0.200 Sum_probs=384.0
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCC--ceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCc
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNG--KLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDP 157 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g--~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~ 157 (1761)
..++.++|+++++++||++|+++.+..+ ...+++||+||+++++++|+.|+ +.|+++||+|+|+++||
T Consensus 18 ~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~~~-- 87 (549)
T 3g7s_A 18 KISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGIS--------RKGVRKGEHVGVCIPNS-- 87 (549)
T ss_dssp CCCTTHHHHHHHHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--
T ss_pred CCCHHHHHHHHHHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEECCCC--
Confidence 3579999999999999999999887321 11148999999999999999999 88999999999999999
Q ss_pred hhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc----ccceeccCCCcceeE
Q psy14338 158 INFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA----GEVVAFKGWPKLTWF 233 (1761)
Q Consensus 158 ~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 233 (1761)
+++++++|||+|+|+++|||||.+|.+ |+.+++++++++++|+++...+.+..... ..++.... ....+
T Consensus 88 ~~~~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 160 (549)
T 3g7s_A 88 IDYVMTIYALWRVAATPVPINPMYKSF-----ELEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFVVGG-EVNSL- 160 (549)
T ss_dssp HHHHHHHHHHHHTTCEEEECCTTCCHH-----HHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSCCCEEEEETC-SSSCH-
T ss_pred HHHHHHHHHHHHhCCEEEccCCCCCHH-----HHHHHHHhcCCCEEEEChHHHHHHHHHHhhCCCcEEEEeCC-CCcCH-
Confidence 999999999999999999999999976 99999999999999999876543322111 11111110 00000
Q ss_pred EeccccCCCCCCCCCCCCCC-CCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHH
Q psy14338 234 VTEHLAKTPKDWAPQPRLTD-DTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWH 312 (1761)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 312 (1761)
.+........ .......+ +|+|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|++++..
T Consensus 161 -~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~ 238 (549)
T 3g7s_A 161 -SEVMDSGSED-FENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHSAEFGL 238 (549)
T ss_dssp -HHHHHHSCSC-CCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTSHHHHHH
T ss_pred -HHHHhcCccc-cccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHHHHHHHH
Confidence 0111111111 11222334 89999999999999999999999999999999999999999999999999999999986
Q ss_pred HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCC--CCCCCceeEEEecCCCccCCH
Q psy14338 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK--DISLSSLRLLLVGDGANPWSL 390 (1761)
Q Consensus 313 ~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~--~~~l~~Lr~v~~gg~Ge~l~~ 390 (1761)
++.++..|+++++.+ .+++..+++.|+++++|+++++| +++..++...... ..++++||.+++| |+++++
T Consensus 239 -~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~~~lr~~~~g--g~~l~~ 310 (549)
T 3g7s_A 239 -VNLMVTVGNEYVVMG----MFNQEMLAENIEKYKGTFSWAVP-PALNVLVNTLESSNKTYDWSYLKVFATG--AWPVAP 310 (549)
T ss_dssp -HTTHHHHCCEEEEES----SCCHHHHHHHHHHTTCCEEEECH-HHHHHHHHHHHHSCCCCCCTTCCEEEEE--SSCCCH
T ss_pred -HHHHHhcCceEEEcC----CCCHHHHHHHHHHhCCeEEEeCC-HHHHHHHhhhhhhcccCCccceeEEEeC--CccCCH
Confidence 899999999999998 78999999999999999999996 4777776543322 2568999999999 999999
Q ss_pred HHHHHHHHHhhh-CCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCC
Q psy14338 391 SSCDQFLSVFQS-KGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQV 469 (1761)
Q Consensus 391 ~~~~~~~~~~~~-~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 469 (1761)
++.++|.+.+.. .|.+..+++|.||+||++.+++..+.. ......++|+|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~-----------------------------~~~~~~~~G~p 361 (549)
T 3g7s_A 311 ALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPL-----------------------------RLDKSTTQGVP 361 (549)
T ss_dssp HHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGG-----------------------------GGGGTTSCCEE
T ss_pred HHHHHHHHHHHhhcCCccccccceEeccccchhhhcCCcc-----------------------------ccCcCCCcccc
Confidence 999999987311 032122599999999999877654311 01246789999
Q ss_pred CCCcEEEEEe-CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 470 MPGCIMTVVK-MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 470 ~~~~~~~I~d-~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
+++++++|+| ++++ ++|.|++|||+|+|+++++||||+|++|+++|..++ ++.+||||||+|++|+||.
T Consensus 362 ~~~~~~~i~d~~~g~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~--------~g~~~~~TGDl~~~~~dG~ 431 (549)
T 3g7s_A 362 MSDIELKVISLEDGR--ELGVGESGEIVIRGPNIFKGYWKREKENQECWWYDE--------KGRKFFRTGDVGFIDEEGF 431 (549)
T ss_dssp CTTCEEEEECSSSCC--EECTTCCEEEEEESTTSCSEETTCTTGGGTSEEECT--------TCCEEEEEEEEEEECTTSC
T ss_pred CCCCEEEEEeCCCCc--CCCCCCceEEEEECcchhhhhCCChhhhhhhhhccC--------CCCceEccCcEEEEcCCce
Confidence 9999999999 6665 699999999999999999999999999999996443 2367999999999999999
Q ss_pred EEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC----CCHHHHHHHHHH
Q psy14338 549 VFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD----CSEEESFQWMSR 623 (1761)
Q Consensus 549 l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~----~~~~~l~~~l~~ 623 (1761)
|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++ ..++.++|+++..++ .+.++++++|++
T Consensus 432 l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V-----~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~~~l~~~l~~ 506 (549)
T 3g7s_A 432 LHFQDRVKEVIKYKGYTIAPFELEALLMKHEAV-----MDVAVIGKPDEEAGEVPKAFIVLKPEYRGKVDEEDIIEWVRE 506 (549)
T ss_dssp EEEEEEC------------CHHHHHHHTTSTTE-----EEEEEECCCC------CEEEEEECSTTTTSCCHHHHHHHHHT
T ss_pred EEEeccccceEEECCEEECHHHHHHHHHhCCCe-----eeEEEEeeEccccCceEEEEEEECCCccCcCCHHHHHHHHHH
Confidence 999999999999999999999999999999888 7999999885 467888999998754 678999999999
Q ss_pred HHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 624 VLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 624 ~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
+||.||+|+.+ +.+++||+|+||||||++|++.+...
T Consensus 507 ~L~~~~~P~~i-------~~v~~lP~t~~GKi~R~~L~~~~~~~ 543 (549)
T 3g7s_A 507 RISGYKRVREV-------EFVEELPRTASGKLLRRLLREKEAEG 543 (549)
T ss_dssp TCC-----CCC-------CEEEECC-------------------
T ss_pred hccCcccceEE-------EEeccCCCCCCcCEeHHHHHHHhhcc
Confidence 99999999987 44599999999999999999887543
|
| >4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-75 Score=758.31 Aligned_cols=491 Identities=15% Similarity=0.172 Sum_probs=329.9
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..+++++|+++++++||++|+++.+ +++||+||+++++++|++|+ +.|+++||+|+|+++|+ ++
T Consensus 74 ~~~l~~~l~~~a~~~pd~~A~~~~~------~~~Ty~el~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~~ 137 (570)
T 4gr5_A 74 GACVHELFEAQAARAPDAVALLHEA------DELTYGALNERANRLAHRLV--------GLGVAPGTLVGVHLERG--FD 137 (570)
T ss_dssp SCCHHHHHHHHHHHCTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HH
T ss_pred cCCHHHHHHHHHHHCCCCeEEECCC------CcEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HH
Confidence 4689999999999999999999765 69999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
+++++|||+|+|+++||++|.++.+ |+.+++++++++++|++......+..... +.. .+...
T Consensus 138 ~~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~---~~~----------~~~~~ 199 (570)
T 4gr5_A 138 MVVALLAVLKAGGGYTMLDPQFPVE-----RLALSLEDTGAPLLVTSRPLSGRLTGTTT---LYV----------EDEAA 199 (570)
T ss_dssp HHHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECTTTTTSSCSSEE---EEC----------CC---
T ss_pred HHHHHHHHHHHCCEEEEcCCCChHH-----HHHHHHHhcCCCEEEecchhhhcccCCcc---eee----------ecccc
Confidence 9999999999999999999999976 99999999999999999876554432210 000 00001
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHh
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVL 319 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~ 319 (1761)
.............++|+|||+|||||||+||||+++|+++.+.+.+ ...++++++|++++++|++|+.+.+. ++.+|+
T Consensus 200 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~ 277 (570)
T 4gr5_A 200 SDAPAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFGLE-LFGALL 277 (570)
T ss_dssp ----CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHHHH-HHHHHT
T ss_pred ccccccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHHHH-HHHHHh
Confidence 1111112234467899999999999999999999999999876654 34568899999999999999998885 999999
Q ss_pred cCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHH
Q psy14338 320 NGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSV 399 (1761)
Q Consensus 320 ~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~ 399 (1761)
.|+++++.+.. .+++..+++.|+++++|++.++| +++..++... ...+++||.+++| |++++++++++|.+.
T Consensus 278 ~G~~~v~~~~~--~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~---~~~~~~lr~~~~g--G~~l~~~~~~~~~~~ 349 (570)
T 4gr5_A 278 FGARCVLQSGQ--NPDPLEIGELVARHGVTMLQLSA-SLFNFLVDEV---PEAFEGVRYAITG--GEPASVPHVAKARRD 349 (570)
T ss_dssp TTCEEEECSSS--SCCHHHHHHHHHHHTCCEEEEEH-HHHHHHHHHC---GGGGTTCSEEEEE--SSCCCHHHHHHHHHH
T ss_pred cCCEEEEcCCc--cCCHHHHHHHHHHcCCcEEEecH-HHHHHHHhhc---hhhCCCceEEEEe--cccCCHHHHHHHHHh
Confidence 99999998743 57899999999999999999996 5777776543 2357899999999 999999999999998
Q ss_pred hhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe
Q psy14338 400 FQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK 479 (1761)
Q Consensus 400 ~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d 479 (1761)
++. + .++|.||+||++.+++..... .........++|+|++|++++|+|
T Consensus 350 ~~~--~---~l~~~YG~TE~~~~~~~~~~~--------------------------~~~~~~~~~~iG~p~~~~~v~i~d 398 (570)
T 4gr5_A 350 HPA--L---RLGNGYGPAESMGFTTHHAVV--------------------------AGDLSGTALPIGVPLAGKRAYVLD 398 (570)
T ss_dssp CTT--C---EEEEEECCGGGCSCSEEEECC--------------------------GGGTTSSSCCCBEECTTEEEEEEC
T ss_pred CCC--c---EEEEeechhhheeeeeeeeec--------------------------ccccCCCccccceeeCCCEEEEEC
Confidence 753 3 499999999998765543211 000112356799999999999999
Q ss_pred CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeE
Q psy14338 480 MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLM 559 (1761)
Q Consensus 480 ~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 559 (1761)
++++ ++|.|++|||+|+|+++++||||+|++|+++|..+||... +++|||||||+|++|+||+|+|+||+||||
T Consensus 399 ~~~~--~~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~----~~~~w~~TGDlg~~d~dG~l~~~GR~~d~I 472 (570)
T 4gr5_A 399 DDLK--PAANGALGELYVAGAGLAHGYVSRPALTAERFVADPFAGP----GGERMYRTGDLARRRADGVLEYVGRADDQV 472 (570)
T ss_dssp TTSC--BCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCS----SCCEEEEEEEEEEECTTSCEEEEEC-----
T ss_pred CCCC--CCCCCCcEEEEEeecccchhcCCCchhhhcccccCCCCCC----CCCEEEeCCCeEEECCCCeEEEEcccCCEE
Confidence 9987 5999999999999999999999999999999999998543 247999999999999999999999999999
Q ss_pred EECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC---CCCHHHHHHHHHHHHHHhhhcceee
Q psy14338 560 TVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP---DCSEEESFQWMSRVLQAVDSIHQVG 635 (1761)
Q Consensus 560 ki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~---~~~~~~l~~~l~~~Lp~y~~P~~i~ 635 (1761)
|++|+||+|.|||++|.+++.| .+|+|++.++. +++.++|+++... ..+.++++++|+++||.||+|..+
T Consensus 473 k~~G~~v~p~eIE~~l~~~p~V-----~~a~Vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i- 546 (570)
T 4gr5_A 473 KIRGFRVEPGEVEARLVGHPAV-----RQAAVLAQDSRLGDKQLVAYVVAERADAPPDAAELRRHVAEALPAYMVPVEC- 546 (570)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EECcEEeCHHHHHHHHhcCCCc-----ceEEEEEeeCCCCCeEEEEEEEecCCCCCcCHHHHHHHHHhhCccccCCcEE-
Confidence 9999999999999999999888 79999998754 6778999988654 256789999999999999999986
Q ss_pred eeEEEEeCCCCccCCCCCcccHHHHHHH
Q psy14338 636 LYCLALVPPNYLPKTPLGGIHLSECKRR 663 (1761)
Q Consensus 636 ~~~v~~v~~~~lP~t~~GKidR~~L~~~ 663 (1761)
+.+++||+|+||||||++|++.
T Consensus 547 ------~~v~~lP~t~~GKi~R~~L~~~ 568 (570)
T 4gr5_A 547 ------VPVDELPRTPNGKLDRRALTGS 568 (570)
T ss_dssp ----------------------------
T ss_pred ------EEcccCCCCCCcCcchHhhhcc
Confidence 6679999999999999999864
|
| >1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-73 Score=732.10 Aligned_cols=489 Identities=14% Similarity=0.169 Sum_probs=405.9
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|+++++++||++|+.+.+. + +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ +++
T Consensus 2 ~tl~~~l~~~a~~~p~~~a~~~~~~-~---~~~Ty~el~~~~~~~A~~L~--------~~Gv~~gd~V~i~~~~~--~~~ 67 (504)
T 1t5h_X 2 QTVNEMLRRAATRAPDHCALAVPAR-G---LRLTHAELRARVEAVAARLH--------ADGLRPQQRVAVVAPNS--ADV 67 (504)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEETTT-T---EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSC--HHH
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCC-C---ceeEHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HHH
Confidence 4689999999999999999987521 2 68999999999999999999 88999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEE--cccccccC-cccccccceeccCCCcceeEEecc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALT--SDACLKGL-PKTAAGEVVAFKGWPKLTWFVTEH 237 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1761)
++++|||+|+|+++||+||.++.+ |+.+++++++++++|+ +....+.+ .......++.+.+. . ...
T Consensus 68 ~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~ 136 (504)
T 1t5h_X 68 VIAILALHRLGAVPALLNPRLKSA-----ELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIFLGDL-----V-RDG 136 (504)
T ss_dssp HHHHHHHHHHTCEEEEECTTSCHH-----HHHHHHHHTTCSEEEECC--CHHHHHHHHCCCCEEEEGGGT-----E-ETT
T ss_pred HHHHHHHHHhCcEEEecCCccChH-----HHHHHHhhcCCcEEEEecchhhhhhhhhccccceeEEecch-----h-hcC
Confidence 999999999999999999999976 8999999999999999 65543322 11100011111100 0 000
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCC--CCCCeEEEccCCcchhhhHHHHH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHY--TEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
...............++++|||+|||||||+||||+++|+++.+.+.+....+++ +++|++++++|++|+++++..++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 216 (504)
T 1t5h_X 137 EPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLV 216 (504)
T ss_dssp EECCCSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTTHH
T ss_pred cccccCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHHHH
Confidence 0000011111234578999999999999999999999999999999988888888 88999999999999999854589
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCC-C-CCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATK-D-HKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~-~-~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
.+|+.|+++++.+ .+++..+++.|+++++|+++++| +++..++... . ....++++||.+++| |+++++++.
T Consensus 217 ~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~l~~lr~~~~g--G~~l~~~~~ 289 (504)
T 1t5h_X 217 AALALDGTYVVVE----EFRPVDALQLVQQEQVTSLFATP-THLDALAAAAAHAGSSLKLDSLRHVTFA--GATMPDAVL 289 (504)
T ss_dssp HHHHTTCEEEECS----SCCHHHHHHHHHHHTCCEEECCH-HHHHHHHHHHCCTTCCCCCTTCCEEEEC--CTTCCHHHH
T ss_pred HHHHcCceEEeCC----CCCHHHHHHHHHHhCCeEEEeCh-HHHHHHHhhhccccccccCccccEEEEc--CCcCCHHHH
Confidence 9999999999998 68999999999999999999996 5777776543 2 234568999999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
++|.+.+ |. .++|.||+||+++ +.... .....++|+|++++
T Consensus 290 ~~~~~~~---~~---~~~~~YG~TE~~~-~~~~~--------------------------------~~~~~~~g~p~~~~ 330 (504)
T 1t5h_X 290 ETVHQHL---PG---EKVNIYGTTEAMN-SLYMR--------------------------------QPKTGTEMAPGFFS 330 (504)
T ss_dssp HHHHHHC---CS---EEEEEEEETTTEE-EEEEE--------------------------------SCSSSSEEBCCTTC
T ss_pred HHHHHhc---Cc---ceeeeeccccccc-ccccc--------------------------------CCCCCccccCCCCC
Confidence 9999988 33 3999999999942 22111 01246799999999
Q ss_pred EEEEEeCCCC-cccCCCCCceEEEEe-cCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEE
Q psy14338 474 IMTVVKMDSP-SYLCKTDEVGEICVA-STGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFV 551 (1761)
Q Consensus 474 ~~~I~d~~~~-~~~~p~G~~GEL~i~-G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~ 551 (1761)
+++|+|+++. ..++|.|+.|||+|+ |+++++||+|+|+.|+++|. +|||||||+|++++||+|+|
T Consensus 331 ~~~i~~~~~~~~~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f~-------------~g~~~TGDlg~~~~dG~l~~ 397 (504)
T 1t5h_X 331 EVRIVRIGGGVDEIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQ-------------DGWYRTSDVAVWTPEGTVRI 397 (504)
T ss_dssp CEEEECTTSCTTCBCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEE-------------TTEEEEEEEEEECTTSCEEE
T ss_pred ceeEEeccCCCCCcCCCCCcceEEEeCCceeeceecCCchhhhhhhc-------------CCccccCcEEEECCCceEEE
Confidence 9999998771 126999999999999 99999999999999999994 78999999999999999999
Q ss_pred EeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHH-HHHH
Q psy14338 552 CGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSR-VLQA 627 (1761)
Q Consensus 552 ~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~-~Lp~ 627 (1761)
+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|+|++.++ .+.++++++|++ +||.
T Consensus 398 ~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V-----~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~~L~~ 472 (504)
T 1t5h_X 398 LGRVDDMIISGGENIHPSEIERVLGTAPGV-----TEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELAD 472 (504)
T ss_dssp EEEGGGCEEETTEEECHHHHHHHHTTSTTE-----EEEEEEEEECSSSSEEEEEEEEECTTCCCCHHHHHHHHHTSSCCG
T ss_pred eCcccCEEEECCEEECHHHHHHHHHhCCCc-----ceEEEEEeecCCCCcEEEEEEEecCCcCcCHHHHHHHHhhccCcc
Confidence 999999999999999999999999998888 79999999854 67899999998654 678999999999 9999
Q ss_pred hhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 628 VDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 628 y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
||+|+.+ +.+++||+|+||||||++|++.+.
T Consensus 473 ~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~ 503 (504)
T 1t5h_X 473 FKRPKRY-------FILDQLPKNALNKVLRRQLVQQVS 503 (504)
T ss_dssp GGSCSEE-------EECSCCCBCTTSCBCHHHHHHHHC
T ss_pred cccceEE-------EEhhhCCCCCCCCEeHHHHHHHhc
Confidence 9999986 456999999999999999998764
|
| >1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-72 Score=745.24 Aligned_cols=513 Identities=16% Similarity=0.172 Sum_probs=418.4
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|+++++++||++|+++.+.++...+++||+||+++++++|+.|+ +.|+++||+|+|+++|+ +++
T Consensus 76 n~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~--------~~Gv~~Gd~V~i~~~~~--~e~ 145 (652)
T 1pg4_A 76 NLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLL--------DLGIKKGDVVAIYMPMV--PEA 145 (652)
T ss_dssp CHHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEEECCSS--HHH
T ss_pred hHHHHHHHHHhccCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHH
Confidence 46899999999999999999986432222378999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCc-------------cc---ccccceec
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLP-------------KT---AAGEVVAF 224 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~-------------~~---~~~~~~~~ 224 (1761)
++++|||+|+|+++||++|.++.+ |+.++++++++++||+++....... .. ....++.+
T Consensus 146 vva~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 220 (652)
T 1pg4_A 146 AVAMLACARIGAVHSVIFGGFSPE-----AVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVL 220 (652)
T ss_dssp HHHHHHHHHHTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEE
T ss_pred HHHHHHHHHcCcEEEecCCCCCHH-----HHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEE
Confidence 999999999999999999999976 8999999999999999876432110 00 00111111
Q ss_pred cCCC-cc------eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCC
Q psy14338 225 KGWP-KL------TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCR-ALTQACHYTEGE 296 (1761)
Q Consensus 225 ~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d 296 (1761)
.... .. .....+..... ..........++|++||+|||||||+||||+++|++++..+. .....++++++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d 299 (652)
T 1pg4_A 221 KRTGSDIDWQEGRDLWWRDLIEKA-SPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGD 299 (652)
T ss_dssp CSSCCCCCCCBTTEEEHHHHHTTS-CSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTC
T ss_pred eCCCCcccccCCCceeHHHHHhhc-CCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCC
Confidence 1100 00 00001111111 111223345789999999999999999999999999887664 456678999999
Q ss_pred eEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCC
Q psy14338 297 NMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLS 374 (1761)
Q Consensus 297 ~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~ 374 (1761)
++++++|++|++++...++.+|++|+++++.+.....+++..+++.|+++++|+++++| +++..++.... ....+++
T Consensus 300 ~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~l~ 378 (652)
T 1pg4_A 300 IYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAP-TAIRALMAEGDKAIEGTDRS 378 (652)
T ss_dssp EEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECH-HHHHHHHTTGGGGTTTCCCT
T ss_pred EEEEccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCH-HHHHHHHhcCccccccCCcC
Confidence 99999999999998435899999999999998432236899999999999999999996 58887776543 3445789
Q ss_pred ceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecC
Q psy14338 375 SLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQ 454 (1761)
Q Consensus 375 ~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 454 (1761)
+||.+++| ||+++++++++|.+.++..++ .++|.||+||++.+++.....
T Consensus 379 sLr~i~~g--Ge~l~~~~~~~~~~~~g~~~~---~i~~~YG~TE~~~~~~~~~~~------------------------- 428 (652)
T 1pg4_A 379 SLRILGSV--GEPINPEAWEWYWKKIGKEKC---PVVDTWWQTETGGFMITPLPG------------------------- 428 (652)
T ss_dssp TCCEEEEE--SSCCCHHHHHHHHHHTTTTCS---CEEEEBCCGGGSSCSBCCCTT-------------------------
T ss_pred ceEEEEEe--cCCCCHHHHHHHHHHhCCCCC---cEEccccCcccccceecCCCC-------------------------
Confidence 99999999 999999999999998842114 499999999998655432210
Q ss_pred CCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEec--CCccccccCCCccccccccccccccCCCccCCC
Q psy14338 455 ENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQD 532 (1761)
Q Consensus 455 ~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~ 532 (1761)
....+.+++|+|++|++++|+|++++ ++|.|+.|||+|+| |++++||||+|+.|.+.|... .+
T Consensus 429 ---~~~~~~~s~G~p~~g~~v~i~d~~g~--~v~~g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~----------~~ 493 (652)
T 1pg4_A 429 ---AIELKAGSATRPFFGVQPALVDNEGH--PQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFST----------FK 493 (652)
T ss_dssp ---TCCBCTTCCBSBCTTCCEEEECTTCC--BCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSS----------ST
T ss_pred ---CcCccCCccccCcCCCeEEEECCCCC--CcCCCceEEEEEccCCCchhhhhcCCHHHHHhhhhhc----------CC
Confidence 00234678999999999999999987 58999999999999 799999999999998887421 26
Q ss_pred ceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC
Q psy14338 533 TYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD 611 (1761)
Q Consensus 533 ~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~ 611 (1761)
|||||||+|++|+||+|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|||++.++
T Consensus 494 g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~~p~V-----~ea~Vvg~~~~~~g~~l~a~Vv~~~~ 568 (652)
T 1pg4_A 494 NMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKI-----AEAAVVGIPHAIKGQAIYAYVTLNHG 568 (652)
T ss_dssp TSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTE-----EEEEEEEEEETTTEEEEEEEEEECTT
T ss_pred CEEECCcEEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCc-----ceEEEEEEEcCCCCeEEEEEEEECCC
Confidence 8999999999999999999999999999999999999999999998888 79999999864 67889999998765
Q ss_pred C--C---HHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 612 C--S---EEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 612 ~--~---~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
. + .++++++|+++||.||+|..| +.+++||+|+||||+|++|++.+...
T Consensus 569 ~~~~~~~~~~l~~~l~~~l~~~~~P~~i-------~~v~~lP~T~sGKi~R~~L~~~~~~~ 622 (652)
T 1pg4_A 569 EEPSPELYAEVRNWVRKEIGPLATPDVL-------HWTDSLPKTRSGKIMRRILRKIAAGD 622 (652)
T ss_dssp CCCCHHHHHHHHHHHHHHTCGGGCCSEE-------EECSCCCBCTTSCBCHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHhCCCCcCCeEE-------EEcCCCCCCCCccchHHHHHHHHhCC
Confidence 3 2 478999999999999999986 55699999999999999999998753
|
| >3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-72 Score=726.67 Aligned_cols=494 Identities=15% Similarity=0.155 Sum_probs=415.9
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCcccc-CCCCCCCEEEEEccCCCchhH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSE-SSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~-~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
++.++|+++|+++|+++|+++.+ +++||+||+++++++|+.|+ + .|+++|++|+++++|+ +++
T Consensus 2 ~l~~~l~~~a~~~p~~~Al~~~~------~~~Ty~eL~~~~~~~A~~L~--------~~~~~~~g~~V~i~~~n~--~~~ 65 (511)
T 3e7w_A 2 KLLHAIQTHAETYPQTDAFRSQG------QSLTYQELWEQSDRAAAAIQ--------KRISGEKKSPILVYGHME--PHM 65 (511)
T ss_dssp CHHHHHHHHHHHSTTSEEEEETT------EEEEHHHHHHHHHHHHHHHT--------TTSCSSSCCCEEEEESSC--HHH
T ss_pred cHHHHHHHHHHHCCCCeEEEcCC------ceeeHHHHHHHHHHHHHHHH--------HhcCCCCCCeEEEEecCC--HHH
Confidence 58899999999999999999755 79999999999999999998 5 3788999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccC
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAK 240 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1761)
++++|||+++|+++||+||.++.+ |+.+++++++++++|+++.......... ...+. ..+....
T Consensus 66 ~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~-~~~~~----------~~~~~~~ 129 (511)
T 3e7w_A 66 IVSFLGSVKAGHPYIPVDLSIPSE-----RIAKIIESSGAELLIHAAGLSIDAVGQQ-IQTVS----------AEELLEN 129 (511)
T ss_dssp HHHHHHHHHHTCCEEEEETTSCHH-----HHHHHHHHHTCCEEEESSSCCTTCCCCS-SCEEE----------HHHHHTS
T ss_pred HHHHHHHHHhCCEEEecCCCChHH-----HHHHHHHhCCCCEEEecccccchhcccc-cceec----------Hhhhhcc
Confidence 999999999999999999999976 9999999999999999765322111000 00000 0111111
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhc
Q psy14338 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLN 320 (1761)
Q Consensus 241 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~ 320 (1761)
............++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++|+.+++. ++.+|+.
T Consensus 130 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~ 208 (511)
T 3e7w_A 130 EGGSVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSVMD-LYPCLQS 208 (511)
T ss_dssp CSCCCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHHHH-HHHHHHT
T ss_pred ccCCccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHHHH-HHHHHhc
Confidence 111112223457899999999999999999999999999999999999999999999999999999999985 9999999
Q ss_pred CcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHh
Q psy14338 321 GMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVF 400 (1761)
Q Consensus 321 G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~ 400 (1761)
|+++++.+... .+++..+++.|+++++|++.++| +++..++..+......++++|.+++| |+++++++.++|.+.+
T Consensus 209 G~~~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~l~~~~~~--G~~l~~~~~~~~~~~~ 284 (511)
T 3e7w_A 209 GGTLHCVTKDA-VNKPKVLFEELKKSGLNVWTSTP-SFVQMCLMDPGFSQDLLPHADTFMFC--GEVLPVSVAKALLERF 284 (511)
T ss_dssp TCEEEECCHHH-HHSHHHHHHHHHHHCCSEEEECH-HHHHHHHTSTTCSTTTCTTCCEEEEC--SSCCCHHHHHHHHHHC
T ss_pred CCEEEEcChhh-hcCHHHHHHHHHHcCCcEEEecH-HHHHHHHhccccccccCCcccEEEEe--cCCCCHHHHHHHHHHC
Confidence 99999988422 37899999999999999999996 58888887776666778999999999 9999999999999998
Q ss_pred hhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeC
Q psy14338 401 QSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKM 480 (1761)
Q Consensus 401 ~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~ 480 (1761)
+. . .++|.||+||++..++..... ..........++|+|+++++++|+|+
T Consensus 285 ~~--~---~i~~~YG~TE~~~~~~~~~~~-------------------------~~~~~~~~~~~~G~~~~~~~~~i~d~ 334 (511)
T 3e7w_A 285 PK--A---KIFNTYGPTEATVAVTSVEIT-------------------------NDVISRSESLPVGFAKPDMNIFIMDE 334 (511)
T ss_dssp TT--C---EEEECCCCGGGSSCSEEEEEC-------------------------HHHHTTCSSCCCBEECTTCEEEEECT
T ss_pred CC--c---EEEeCcccchheeeeeEEecc-------------------------ccccccCCcCCCcceeCCCEEEEECC
Confidence 53 2 499999999998655432210 00001123568999999999999999
Q ss_pred CCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEE
Q psy14338 481 DSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMT 560 (1761)
Q Consensus 481 ~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvk 560 (1761)
+++ ++|.|++|||+|+|+++++||||+|++|+++|..+ ++++||||||+|++ +||+|+|+||+|||||
T Consensus 335 ~g~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~---------~g~~~~~TGDlg~~-~dG~l~~~GR~~d~ik 402 (511)
T 3e7w_A 335 EGQ--PLPEGEKGEIVIAGPSVSRGYLGEPELTEKAFFSH---------EGQWAYRTGDAGFI-QDGQIFCQGRLDFQIK 402 (511)
T ss_dssp TSC--BCCTTCCEEEEEESTTSCCCBTTCHHHHHHHEEES---------SSSEEEEEEEEEEE-ETTEEEEEEESSSEEE
T ss_pred CCC--CCCCCCceEEEEecCccChhhCCCcccchhhhcCC---------CCCEEEeCCCeEEc-cCCeEEEEccccCEEE
Confidence 987 59999999999999999999999999999999643 13568999999999 5999999999999999
Q ss_pred ECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCC------HHHHHHHHHHHHHHhhhcce
Q psy14338 561 VTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCS------EEESFQWMSRVLQAVDSIHQ 633 (1761)
Q Consensus 561 i~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~------~~~l~~~l~~~Lp~y~~P~~ 633 (1761)
++|+||+|.|||++|.+++.| .+|+|++.++ ..++.++|++++.++.. .++++++|+++||.||+|..
T Consensus 403 ~~G~~v~p~eIE~~l~~~p~V-----~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~ 477 (511)
T 3e7w_A 403 LHGYRMELEEIEFHVRQSQYV-----RSAVVIPYQPNGTVEYLIAAIVPEEHEFEKEFQLTSAIKKELAASLPAYMIPRK 477 (511)
T ss_dssp ETTEEEEHHHHHHHHHHSTTE-----EEEEEEEECSSSSCCEEEEEEEECCCCCSSHHHHHHHHHHHHHHHSCGGGSCSE
T ss_pred ECCEEeCHHHHHHHHHhCCCc-----ceEEEEEEcCCCCceEEEEEEEeccccccchhhHHHHHHHHHHhhCchhhCCee
Confidence 999999999999999999888 7999999874 46788999999876532 36799999999999999998
Q ss_pred eeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 634 VGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 634 i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+ +.+++||+|+||||||++|++.+.+
T Consensus 478 ~-------~~v~~lP~t~~GKi~R~~L~~~~~~ 503 (511)
T 3e7w_A 478 F-------IYQDHIQMTANGKIDRKRIGEEVLV 503 (511)
T ss_dssp E-------EECSCCCBCTTSCBCHHHHHHHHHH
T ss_pred E-------EEeccCCCCCCcCccHHHHHhHHhh
Confidence 6 5569999999999999999998865
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-73 Score=745.66 Aligned_cols=486 Identities=16% Similarity=0.144 Sum_probs=393.4
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
....++++.|.+++. ++||++|++ ++++++||+||+++++++|++|++. |+++||+|+|+++||+++++
T Consensus 24 ~~~~tl~~~~~~~a~-----~~Pd~~Av~-----~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~g~~V~i~~~~s~~~vv 92 (620)
T 4dg8_A 24 YAHPTVVARFSEMAA-----LHPHREAIR-----DRFGSVDYRQLLDSAEQLSDYLLEH-YPQPGVCLGVYGEYSRESIT 92 (620)
T ss_dssp GGSCCHHHHHHHHHH-----HCTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHH-CCSSCCEEEEESSSCHHHHH
T ss_pred CCCCCHHHHHHHHHH-----hCCCCeEEE-----cCCCcCcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHH
Confidence 345678888888876 779999999 6788999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchh
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKL 1319 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1319 (1761)
++|||+|+|++||||||.+|.+ |+.+++++++++++|++........... ... ... . .....
T Consensus 93 a~lailkaGa~~vpld~~~p~~------~l~~il~~~~~~~vl~~~~~~~~~~~~~---~~~---~~~---~---~~~~~ 154 (620)
T 4dg8_A 93 CLLAILLSGHHYLYIDLKQPAA------WNAELCRQVDCRLILDCSTTPTPANGLP---CVP---VRH---L---PAAPA 154 (620)
T ss_dssp HHHHHHHTTCEEEECCTTSCHH------HHHHHHHHHTEEEEEECCSSCCCCTTSC---EEE---GGG---C---CCCCC
T ss_pred HHHHHHHhCCEEEeeCccChHH------HHHHHHHhCCCcEEEecCcccccccCCc---eee---ecc---C---CcCCc
Confidence 9999999999999999999988 9999999999999997653211100000 000 000 0 00001
Q ss_pred hhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceE
Q psy14338 1320 AALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHS 1399 (1761)
Q Consensus 1320 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~ 1399 (1761)
........++++|||+|||||||+||||+++|+++.+.+.+ ...+++.+++++++++|++|+.++ +++|.+|++|+++
T Consensus 155 ~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~ 232 (620)
T 4dg8_A 155 SVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAAT-LEIWGALLNGGCC 232 (620)
T ss_dssp CSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEE
T ss_pred cccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHH-HHHHHHHhcCCEE
Confidence 11123456899999999999999999999999999888766 557789999999999999998887 6799999999999
Q ss_pred EEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHH
Q psy14338 1400 ILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKL 1479 (1761)
Q Consensus 1400 vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~ 1479 (1761)
++.+.. .+++..+++.|+++++|+++++|++++.+++. ....+++||.+++|||++++ .+.+++.+.
T Consensus 233 v~~~~~--~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~----------~~~~l~~lr~v~~gGe~l~~-~~~~~~~~~ 299 (620)
T 4dg8_A 233 VLNDLG--PLDPGVLRQLIGERGADSAWLTASLFNTLVDL----------DPDCLGGLRQLLTGGDILSV-PHVRRALLR 299 (620)
T ss_dssp EECCSS--SCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHH----------CGGGGTTCSEEEEESSCCCH-HHHHHHHHH
T ss_pred EeCccc--cCCHHHHHHHHHHhCCcEEEccHHHHHHHHhc----------ChhhCCCccEEEEEeCcCCH-HHHHHHHHh
Confidence 997532 47999999999999999999999999999763 23457899999999999998 666666655
Q ss_pred HhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCC
Q psy14338 1480 FSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPET 1559 (1761)
Q Consensus 1480 ~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~ 1559 (1761)
+.. ..++|.||+||++.+++..... .. ......+++|+|++|++++|+|+++
T Consensus 300 ~~~-----~~l~n~YG~TE~~~~~~~~~~~---------~~--------------~~~~~~~~iG~p~~~~~~~i~d~~~ 351 (620)
T 4dg8_A 300 HPR-----LHLVNGYGPTENTTFTCCHVVT---------DD--------------DLEEDDIPIGKAIAGTAVLLLDEHG 351 (620)
T ss_dssp CTT-----CEEEEEECCGGGCSCSEEEECC---------TG--------------GGGSSSCCCBEECTTEEEEEECTTS
T ss_pred CCC-----eEEEeeEchhhhhhheEEEecc---------cc--------------ccCCCCCCceecccCcEEEEECccC
Confidence 432 6899999999987654321110 00 0011235699999999999999774
Q ss_pred CCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCccc
Q psy14338 1560 KGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLH 1639 (1761)
Q Consensus 1560 ~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~ 1639 (1761)
..++|.|++|||||+|+++++|||| +|++|+++|+.+|+.+ ...|||||||+|++ ++| |+
T Consensus 352 ~~~~~~g~~GEl~i~G~~v~~GY~~---~p~~t~~~f~~~p~~~-~~~~~yrTGDl~~~------~~d--------G~-- 411 (620)
T 4dg8_A 352 QEIAEPDRAGEIVAFGAGLAQGYRN---DAARTRASFVELPYRG-RLLRAYRTGDRARY------DEQ--------GR-- 411 (620)
T ss_dssp CBCCSSSCCEEEEEEETTCCSEETT---CHHHHHHHEEEEEETT-EEEEEEEEEEEEEE------CTT--------SC--
T ss_pred CCCCCCCCceEEEEeccccccccCC---ChhhhhhhhccCCCCC-CCceEEeCCCEEEE------CCC--------Ce--
Confidence 4458999999999999999999999 9999999999988643 22389999999999 999 99
Q ss_pred ceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeCC----eEEEEEEeCCCchhHhhHHHHHHHHHhhhc
Q psy14338 1640 DAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTN----LLVVVVELDGNESEALDLVPLVTNAVLEEH 1715 (1761)
Q Consensus 1640 ~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~~----~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~ 1715 (1761)
|+|+||+|||||++|+||+|+|||+ +|.+||+|.+|+|++.++ .++++++.. .++++++++++ || .
T Consensus 412 --l~~~GR~dd~Ik~~G~ri~~~eIE~-~l~~~p~V~~a~Vv~~~~~~~~~lv~~~~~~-----~~~~~~~l~~~-Lp-~ 481 (620)
T 4dg8_A 412 --LRFIGRGDGQVKLNGYRLDLPALEQ-RFRRQPGILDCALLVRERNGVKQLLCAWTGK-----ADASPQALLRQ-LP-T 481 (620)
T ss_dssp --EEEEECSSSEEEETTEEEEHHHHHH-HHHTSTTEEEEEEEEEEETTEEEEEEEEEEC-----TTCCCHHHHHH-SC-G
T ss_pred --EEEEccCCCEEEECCEEcCHHHHHH-HHHhCCCccEEEEEEEeCCCceEEEEEEecC-----hHHHHHHHHHh-Ch-h
Confidence 9999999999999999999999999 899999999999997532 344444432 23455677776 98 9
Q ss_pred CceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1716 HLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1716 ~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
||+|+.|++++ +||+|+||||||++|++.+.+
T Consensus 482 y~~P~~~~~v~--~lP~t~~GKidR~~L~~~~~~ 513 (620)
T 4dg8_A 482 WQRPHACVRVE--ALPLTAHGKLDRAALLRRLEE 513 (620)
T ss_dssp GGSCSEEEECS--SCCCC----CCHHHHHHHTCS
T ss_pred hcCCcEEEEEC--cCCCCcccCHhHHHHhhcccc
Confidence 99999999999 999999999999999987743
|
| >3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-74 Score=744.09 Aligned_cols=498 Identities=16% Similarity=0.167 Sum_probs=327.9
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|+++++++||++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++
T Consensus 29 ~~tl~~~l~~~a~~~p~~~Al~~~~------~~~Ty~eL~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~~ 92 (544)
T 3o83_A 29 DQPLTRILTVGVQSHPHSLAIICGE------RQLSYIELDRLSTNLATRLA--------EKGLGKGDTALVQLPNV--AE 92 (544)
T ss_dssp CCCTTHHHHHHHHHCTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEECCCSS--HH
T ss_pred CCCHHHHHHHHHHhCCCceEEEcCC------CceeHHHHHHHHHHHHHHHH--------HCCCCCCCEEEEECCCC--HH
Confidence 3679999999999999999999765 79999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCc-----cc---c--cccceeccCCCc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLP-----KT---A--AGEVVAFKGWPK 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~-----~~---~--~~~~~~~~~~~~ 229 (1761)
+++++|||+|+|+++||++|.++.+ |+.+++++++++++|++........ .. . ...++......
T Consensus 93 ~~~~~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 166 (544)
T 3o83_A 93 FYIVFFALLKAGVVVLNALYSHRQY-----ELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQA- 166 (544)
T ss_dssp HHHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCT-
T ss_pred HHHHHHHHHHhCcEEecCCCCCCHH-----HHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCc-
Confidence 9999999999999999999999976 8999999999999999876431100 00 0 00011111000
Q ss_pred ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
......+................++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~ 246 (544)
T 3o83_A 167 TDFGLLDWIETPAETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFM 246 (544)
T ss_dssp TSEEHHHHHHSCCSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHH
T ss_pred cccchhhhhhcccccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEee
Confidence 00000001111111111224457899999999999999999999999999999999999999999999999999999887
Q ss_pred hHH-HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 310 LWH-SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 310 ~~~-~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
+.. .++.+|..|+++++.+ .+++..+++.|+++++|++.++| +++..++........++++||.+++| |+++
T Consensus 247 ~~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~i~~g--G~~l 319 (544)
T 3o83_A 247 LSSPGALGVLHAGGCVVMAP----NPEPLNCFSIIQRHQVNMASLVP-SAVIMWLEKAAQYKDQIQSLKLLQVG--GASF 319 (544)
T ss_dssp HHSSHHHHHHHTTCEEEECS----SCCHHHHHHHHHHHTCCEEEECH-HHHHHHHHHHTTTHHHHTTCCEEEEE--SSCC
T ss_pred cchHHHHHHHHcCCEEEECC----CCCHHHHHHHHHHHCCCEEEech-HHHHHHHhchhhccccCCcceEEEEc--CCCC
Confidence 753 4899999999999998 67999999999999999999996 47777776655445568899999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++++.++|.+.+ |. .++|.||+||+++.++.... .......++|+
T Consensus 320 ~~~~~~~~~~~~---~~---~~~~~YG~TE~~~~~~~~~~-----------------------------~~~~~~~~~G~ 364 (544)
T 3o83_A 320 PESLARQVPEVL---NC---KLQQVFGMAEGLVNYTRLDD-----------------------------SDEQIFTTQGR 364 (544)
T ss_dssp CHHHHTHHHHHH---CS---EEEEEEECTTSCEEECCTTS-----------------------------CHHHHHHCCCE
T ss_pred CHHHHHHHHHHh---CC---cEEeeeccccccceeecCCC-----------------------------chhhccCCCce
Confidence 999999999988 44 39999999999865442211 01234578999
Q ss_pred CC-CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 469 VM-PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 469 p~-~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
|+ ++++++|+|++++ ++|.|++|||+|+|+++++||||+|+.|+++|. .++||||||+|++++||
T Consensus 365 p~~~~~~~~i~d~~~~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~------------~~g~~~TGDlg~~~~dG 430 (544)
T 3o83_A 365 PISSDDEIKIVDEQYR--EVPEGEIGMLATRGPYTFCGYYQSPEHNSQVFD------------EDNYYYSGDLVQRTPDG 430 (544)
T ss_dssp ESCTTCEEEEECTTSC--BCCTTCCEEEEEECTTSCSCCTTCHHHHHHHBC------------TTCCEEEEEEEEECTTS
T ss_pred ecCCCcEEEEECCCCC--CCCCCCeeEEEEecCCcchhhcCChhhhhhhCC------------CCCCeEcCCEEEEcCCC
Confidence 97 8999999999887 599999999999999999999999999999994 47999999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC-CCHHHHHHHHHH-H
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD-CSEEESFQWMSR-V 624 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~-~~~~~l~~~l~~-~ 624 (1761)
+|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|+++..+. .+.+++++++++ .
T Consensus 431 ~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V-----~~a~vv~~~~~~~g~~~~a~vv~~~~~~~~~~l~~~~~~~~ 505 (544)
T 3o83_A 431 NLRVVGRIKDQINRGGEKIASEEIEKLILLHPEV-----MHAALVAIVDEQFGEKSCAFIVSRNPELKAVVLRRHLMELG 505 (544)
T ss_dssp CEEEEEEEC-----------------------------------------------------------------------
T ss_pred CEEEEeecCCEEEeCCEEECHHHHHHHHHhCCCc-----cEEEEEeccCCCCCceEEEEEEeCCCCCCHHHHHHHHHhCC
Confidence 9999999999999999999999999999999888 69999998854 67889999887653 567889999998 7
Q ss_pred HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 625 LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 625 Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
||.||+|..+ +.+++||+|+||||||++|++.+...
T Consensus 506 l~~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~~ 541 (544)
T 3o83_A 506 IAQYKLPDQI-------KLIESLPLTAVGKVDKKQLRSILNTS 541 (544)
T ss_dssp -------------------------------------------
T ss_pred CCcccCCcEE-------EEeccCCCCCCCCCcHHHHHHHHhhc
Confidence 9999999986 55699999999999999999987653
|
| >3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-72 Score=728.87 Aligned_cols=498 Identities=15% Similarity=0.209 Sum_probs=414.2
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
++.++|+++|+++||++|+++.+ +++||+||+++++++|++|+ +.|+++|++|+++++|+ ++++
T Consensus 2 ~l~~~l~~~a~~~p~~~A~~~~~------~~~Ty~el~~~~~~lA~~L~--------~~g~~~gd~V~i~~~n~--~e~~ 65 (512)
T 3fce_A 2 KLLEQIEKWAAETPDQTAFVWRD------AKITYKQLKEDSDALAHWIS--------SEYPDDRSPIMVYGHMQ--PEMI 65 (512)
T ss_dssp CHHHHHHHHHHHSTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HHSTTCCCCEEEEESSC--HHHH
T ss_pred cHHHHHHHHHHHCCCceEEEeCC------ceEEHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEeCCC--HHHH
Confidence 58899999999999999999866 69999999999999999999 88999999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccCC
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKT 241 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (1761)
+++|||+++|+++||++|.++.+ |+.+++++++++++|++......... ..++.... .. .......
T Consensus 66 ~~~la~~~~G~v~vpl~~~~~~~-----~l~~il~~~~~~~~i~~~~~~~~~~~---~~~~~~~~---~~---~~~~~~~ 131 (512)
T 3fce_A 66 INFLGCVKAGHAYIPVDLSIPAD-----RVQRIAENSGAKLLLSATAVTVTDLP---VRIVSEDN---LK---DIFFTHK 131 (512)
T ss_dssp HHHHHHHHTTCCEEEEETTSCHH-----HHHHHHHHSCCCEEEESSCCCSSCCS---SEEEETHH---HH---HHHHHTT
T ss_pred HHHHHHHHhCCEEEeeCCCCcHH-----HHHHHHHhcCCCEEEecCcccccccc---cceechhh---hh---hhccccc
Confidence 99999999999999999999976 99999999999999998553221100 00000000 00 0000011
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcC
Q psy14338 242 PKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNG 321 (1761)
Q Consensus 242 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G 321 (1761)
.....+.....++++|||+|||||||.||||+++|+++.+.+.+....++++++|++++++|++|+.+++. ++.+|+.|
T Consensus 132 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G 210 (512)
T 3fce_A 132 GNTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSVMD-IYPSLVTG 210 (512)
T ss_dssp TCCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGHHH-HHHHHHTT
T ss_pred ccCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHHHH-HHHHHhCC
Confidence 11112233457899999999999999999999999999999999999999999999999999999999985 99999999
Q ss_pred cEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhh
Q psy14338 322 MHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQ 401 (1761)
Q Consensus 322 ~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~ 401 (1761)
+++++.+... .+++..+++.|+++++|++.++| +++..++........++++||.+++| |+++++++.++|.+.++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~~--G~~l~~~~~~~~~~~~~ 286 (512)
T 3fce_A 211 GTLWAIDKDM-IARPKDLFASLEQSDIQVWTSTP-SFAEMCLMEASFSESMLPNMKTFLFC--GEVLPNEVARKLIERFP 286 (512)
T ss_dssp CEEEECCHHH-HHSHHHHHHHHHHHCCCEEEECH-HHHHHHTTSTTCSTTTSTTCCEEEEC--SSCCCHHHHHHHHHHCT
T ss_pred CEEEECCHHH-hhCHHHHHHHHHHcCCcEEEecH-HHHHHHHhhccccchhCccccEEEEe--cCcCCHHHHHHHHHHCC
Confidence 9999998422 37899999999999999999996 58888877766667788999999999 99999999999999985
Q ss_pred hCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCC
Q psy14338 402 SKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMD 481 (1761)
Q Consensus 402 ~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~ 481 (1761)
.. .++|.||+||++++++..... ..........++|+|+++++++|+|++
T Consensus 287 ~~-----~i~~~YG~TE~~~~~~~~~~~-------------------------~~~~~~~~~~~~G~~~~~~~~~i~d~~ 336 (512)
T 3fce_A 287 KA-----TIMNTYGPTEATVAVTGIHVT-------------------------EEVLDQYKSLPVGYCKSDCRLLIMKED 336 (512)
T ss_dssp TC-----EEEEEECCGGGSSCSEEEECC-------------------------HHHHHHCSSCCCEEECTTCEEEEECSS
T ss_pred CC-----EEEeCcccChhhhheeeEEec-------------------------cccccccCCCccccccCCcEEEEECCC
Confidence 32 499999999998765432211 000011235689999999999999999
Q ss_pred CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEE
Q psy14338 482 SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTV 561 (1761)
Q Consensus 482 ~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki 561 (1761)
++ ++|.|++|||+|+||++++||||+|++|+++|... +++|||||||+|++ +||+|+|+||+|||||+
T Consensus 337 g~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~---------~~~~~~~TGDlg~~-~dG~l~i~GR~~d~ik~ 404 (512)
T 3fce_A 337 GT--IAPDGEKGEIVIVGPSVSVGYLGSPELTEKAFTMI---------DGERAYKTGDAGYV-ENGLLFYNGRLDFQIKL 404 (512)
T ss_dssp SC--BCCTTSCEEEEEESTTSCSCBTTCHHHHHHHEEEE---------TTEEEEEEEEEEEE-ETTEEEEEEEGGGCEEE
T ss_pred CC--CCCCCCeEEEEEeccccChhhcCCchhhhhccccC---------CCCEEEeCCceEEe-cCCEEEEecccCCEEEE
Confidence 87 59999999999999999999999999999999521 24789999999999 79999999999999999
Q ss_pred CCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCC------HHHHHHHHHHHHHHhhhccee
Q psy14338 562 TGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCS------EEESFQWMSRVLQAVDSIHQV 634 (1761)
Q Consensus 562 ~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~------~~~l~~~l~~~Lp~y~~P~~i 634 (1761)
+|+||+|.|||+.|.+++.| .+|+|++.++ ..++.++|++++.+... .++++++|+++||.||+|..+
T Consensus 405 ~G~~v~p~eIE~~l~~~p~V-----~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~~ 479 (512)
T 3fce_A 405 HGYRMELEEIEHHLRACSYV-----EGAVIVPIKKGEKYDYLLAVVVPGEHSFEKEFKLTSAIKKELNERLPNYMIPRKF 479 (512)
T ss_dssp TTEEECHHHHHHHHHHSTTE-----EEEEEEEEEETTEEEEEEEEEEECSCCCSSHHHHHHHHHHHHHTTSCGGGSCSEE
T ss_pred CCEEECHHHHHHHHHhCCCc-----ceEEEEEEecCCCceEEEEEEecCCccccchhhhHHHHHHHHHhhCchhcCCeEE
Confidence 99999999999999999888 7999999885 46678999999876532 357899999999999999986
Q ss_pred eeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCC
Q psy14338 635 GLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGN 668 (1761)
Q Consensus 635 ~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~ 668 (1761)
+.+++||+|+||||||++|++.+.+.+
T Consensus 480 -------~~~~~lP~t~~GKi~R~~L~~~~~~~~ 506 (512)
T 3fce_A 480 -------MYQSSIPMTPNGKVDRKKLLSEVTALE 506 (512)
T ss_dssp -------EECSCCCBCTTSSBCHHHHHHHHHC--
T ss_pred -------EEecccCCCCCcChHHHHHHhhhhhcc
Confidence 556999999999999999999987654
|
| >3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-72 Score=729.71 Aligned_cols=499 Identities=14% Similarity=0.148 Sum_probs=411.8
Q ss_pred hhHHHHHHHHhhh-----cCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccC-CCCCCCEEEEEccC
Q psy14338 81 RNLEAAIQRYGSA-----TYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSES-SLKSGDRIALVYPN 154 (1761)
Q Consensus 81 ~~l~~~~~~~a~~-----~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~-Gv~~g~~V~l~~~~ 154 (1761)
.+++++|++++++ +||++|+++.+.+|.. +++||+||+++++++|+.|+ +. |+++||+|+|+++|
T Consensus 38 ~~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~~-~~~Ty~el~~~~~~lA~~L~--------~~~Gv~~gd~V~i~~~n 108 (570)
T 3c5e_A 38 NFASDVLDHWADMEKAGKRPPSPALWWVNGKGKE-LMWNFRELSENSQQAANVLS--------GACGLQRGDRVAVVLPR 108 (570)
T ss_dssp CHHHHTHHHHHHHHHTTSSCCCEEEEEECSSSCE-EEEEHHHHHHHHHHHHHHHH--------TTTCCCTTCEEEEECCS
T ss_pred cHHHHHHHHHHhhccccCCCCceEEEEEcCCCce-eEEeHHHHHHHHHHHHHHHH--------HccCCCCCCEEEEEcCC
Confidence 4678999999998 9999999987543321 68999999999999999999 77 99999999999999
Q ss_pred CCchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCc
Q psy14338 155 NDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPK 229 (1761)
Q Consensus 155 s~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~ 229 (1761)
+ +++++++|||+|+|+++||+||.++.+ |+.+++++++++++|+++...+.+..... ..++.......
T Consensus 109 ~--~e~~~~~lA~~~~Ga~~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (570)
T 3c5e_A 109 V--PEWWLVILGCIRAGLIFMPGTIQMKST-----DILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSC 181 (570)
T ss_dssp C--HHHHHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSSCC
T ss_pred C--HHHHHHHHHHHHcCeEEEecCCCCCHH-----HHHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEecccCc
Confidence 9 999999999999999999999999976 89999999999999998875443322110 01111111000
Q ss_pred ceeEE-eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHH-HHHHHHHHcCCCCCCeEEEccCCcch
Q psy14338 230 LTWFV-TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLS-HCRALTQACHYTEGENMVCVLDFKRE 307 (1761)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~~~ 307 (1761)
..+.. .+...... ...+.....++|+|||+|||||||+||||+++|+.+.+ ..... ..++++++|++++++|++|+
T Consensus 182 ~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~ 259 (570)
T 3c5e_A 182 DGWLNFKKLLNEAS-TTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDA-GWTGLQASDIMWTISDTGWI 259 (570)
T ss_dssp TTSEEHHHHHHHSC-SCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHT-TTTSCCTTCEEEECCCTTSH
T ss_pred cccccHHHHhhccc-ccccccCCCCCCcEEEEECCCCCCCCCEEEechHHHHhhhhhhh-hhcCCCCCceEEEcCchHHH
Confidence 00000 01111111 11122345789999999999999999999999994432 34444 66789999999999999999
Q ss_pred hhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCcc
Q psy14338 308 TGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANP 387 (1761)
Q Consensus 308 ~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~ 387 (1761)
.+++..++.+|..|+++++.+.. .+++..+++.|+++++|+++++| +++..++... ....++++||.+++| |++
T Consensus 260 ~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~-~~~~~~~~lr~i~~g--Ge~ 333 (570)
T 3c5e_A 260 LNILCSLMEPWALGACTFVHLLP--KFDPLVILKTLSSYPIKSMMGAP-IVYRMLLQQD-LSSYKFPHLQNCVTV--GES 333 (570)
T ss_dssp HHHHHTTHHHHHHTCEEEEECCS--SCCHHHHHHHHHHSCCCEEEECH-HHHHHHHTSC-TTTCCCTTCCEEEEE--SSC
T ss_pred HHHHHHHHHHHHhCceEEEecCC--CCCHHHHHHHHHHhCCeEEeccH-HHHHHHHhcc-ccccccccceEEEEc--CCc
Confidence 99875589999999999998742 57999999999999999999996 5777777652 334568999999999 999
Q ss_pred CCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccC
Q psy14338 388 WSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCG 467 (1761)
Q Consensus 388 l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 467 (1761)
+++++.++|.+.+ |++ ++|.||+||++++++..+.. .....++|
T Consensus 334 l~~~~~~~~~~~~---g~~---i~~~YG~TE~~~~~~~~~~~------------------------------~~~~~~vG 377 (570)
T 3c5e_A 334 LLPETLENWRAQT---GLD---IRESYGQTETGLTCMVSKTM------------------------------KIKPGYMG 377 (570)
T ss_dssp CCHHHHHHHHHHH---SCC---CEEEEEETTTEEEEECCTTS------------------------------CCCTTCCC
T ss_pred CCHHHHHHHHHHh---CCc---hhhccchhhcccceecCccc------------------------------ccCCCccc
Confidence 9999999999988 554 99999999998766543311 12356899
Q ss_pred CCCCCcEEEEEeCCCCcccCCCCCceEEEEe-----cCCccccccCCCccccccccccccccCCCccCCCceEeecceEE
Q psy14338 468 QVMPGCIMTVVKMDSPSYLCKTDEVGEICVA-----STGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGF 542 (1761)
Q Consensus 468 ~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~-----G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~ 542 (1761)
+|+++++++|+|++++ ++|.|++|||+|+ |+++++||||+|+.|+++|. ++||||||+|+
T Consensus 378 ~p~~~~~v~i~d~~g~--~~~~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~-------------~~~~~TGDlg~ 442 (570)
T 3c5e_A 378 TAASCYDVQIIDDKGN--VLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIR-------------GDFWLLGDRGI 442 (570)
T ss_dssp EECTTCCEEEECTTSC--BCCTTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTEE-------------TTEEEEEEEEE
T ss_pred ccCCCceEEEECCCCC--CCCCCCCCeeEEeccCCCCchhhccccCChhHhhhhhc-------------CCccccceeEE
Confidence 9999999999999987 5999999999999 99999999999999999995 78999999999
Q ss_pred EeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCC-------CH
Q psy14338 543 LGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDC-------SE 614 (1761)
Q Consensus 543 ~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~-------~~ 614 (1761)
+|+||+|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|+|+..++. ..
T Consensus 443 ~d~dG~l~~~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V-----~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~~~~ 517 (570)
T 3c5e_A 443 KDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAV-----VETAVISSPDPVRGEVVKAFVVLASQFLSHDPEQLT 517 (570)
T ss_dssp ECTTSCEEEEEEGGGCEEETTEEECHHHHHHHHHTSTTE-----EEEEEEEEEETTTEEEEEEEEEECGGGTTSCHHHHH
T ss_pred EcCCceEEEEecCCCEEEECCEEECHHHHHHHHHhCCCc-----ceEEEEeeeCCCCCeEEEEEEEECCcccCcchHHHH
Confidence 999999999999999999999999999999999998888 79999999864 678899999976542 25
Q ss_pred HHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 615 EESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 615 ~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++++++|+++||.||+|..+ +.+++||+|+|||+||++|++.+..
T Consensus 518 ~~l~~~l~~~L~~~~~P~~i-------~~v~~lP~t~~GKi~R~~L~~~~~~ 562 (570)
T 3c5e_A 518 KELQQHVKSVTAPYKYPRKI-------EFVLNLPKTVTGKIQRAKLRDKEWK 562 (570)
T ss_dssp HHHHHHHHHHSCGGGSCSEE-------EEESCCCBCTTCCBCHHHHHHHHTC
T ss_pred HHHHHHHHhhCccccCCcEE-------EEeccCCCCCCcCCcHHHHHHHHHh
Confidence 68999999999999999986 3459999999999999999998753
|
| >3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-73 Score=731.50 Aligned_cols=488 Identities=18% Similarity=0.226 Sum_probs=322.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.+++++|+++|+++||++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++
T Consensus 5 ~~tl~~~l~~~a~~~pd~~Al~~~~------~~~Ty~eL~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~~~--~~ 68 (509)
T 3ivr_A 5 DFTLADVYRRNAALFPDRTAFMVDG------VRLTHRDYLARAERLASGLL--------RDGVHTGDRVAILSQNC--SE 68 (509)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSC--HH
T ss_pred cCCHHHHHHHHHHHCCCceEEEECC------cEEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCC--HH
Confidence 4689999999999999999999855 79999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccc----cc-ccceeccCCCcceeEE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKT----AA-GEVVAFKGWPKLTWFV 234 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 234 (1761)
+++++|||+|+|+++||+||.+|.+ |+.+++++++++++|++......+... .. ..++.... ....+
T Consensus 69 ~~~~~lA~~~~Ga~~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 140 (509)
T 3ivr_A 69 MIELIGAVALIGAILLPVNYRLNAD-----EIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGD-GSGPF-- 140 (509)
T ss_dssp HHHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSC-CCSSC--
T ss_pred HHHHHHHHHHhCCEEEecCCCCCHH-----HHHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCC-CCcCh--
Confidence 9999999999999999999999976 999999999999999998754431111 00 01111111 00011
Q ss_pred eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHH
Q psy14338 235 TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSV 314 (1761)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i 314 (1761)
.+................++|+|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|++++.. +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~ 219 (509)
T 3ivr_A 141 APFKDLASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGLGL-M 219 (509)
T ss_dssp EEGGGTCCCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHH-H
T ss_pred hhHhhccCCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHHHH-H
Confidence 111110111222334568899999999999999999999999999999999999999999999999999999999986 7
Q ss_pred HHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHH
Q psy14338 315 LTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCD 394 (1761)
Q Consensus 315 ~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~ 394 (1761)
+.+++.|++.++.. .+++..+++.|+++++|++..+|+ ++..++... ...++++||.++.| |++ +..+
T Consensus 220 ~~~~~~~g~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~-~~~~l~~~~--~~~~l~~lr~~~~~--g~~---~~~~ 287 (509)
T 3ivr_A 220 LTLQQAGGASVIAA----KFDPAQAARDIEAHKVTVMAEFAP-MLGNILDQA--APAQLASLRAVTGL--DTP---ETIE 287 (509)
T ss_dssp HHHHHHTCEEEECS----SCCHHHHHHHHHHHTCCEEEEETT-HHHHHHHHC--CGGGGTTCCEEEEE--CCH---HHHH
T ss_pred HHHHHhCCcEEEec----ccCHHHHHHHHHHHCCcEEEecHH-HHHHHHhcc--cccchhhhheeccc--CCh---HHHH
Confidence 77777788888776 679999999999999999999975 777777654 34567899999998 776 8888
Q ss_pred HHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcE
Q psy14338 395 QFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCI 474 (1761)
Q Consensus 395 ~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 474 (1761)
+|.+.++. . .++|.||+||++.+++..+.. ....++|+|++|++
T Consensus 288 ~~~~~~~~--~---~~~~~YG~TE~~~~~~~~~~~-------------------------------~~~~~~G~p~~~~~ 331 (509)
T 3ivr_A 288 RFEATCPN--A---TFWATFGQSETSGLSTFAPYR-------------------------------DRPKSAGRPLFWRT 331 (509)
T ss_dssp HHHHHCTT--C---EEEEEEEEGGGTEEEEEEEGG-------------------------------GSTTSCCEECTTCE
T ss_pred HHHHhcCC--C---eEEcccCccccccccccCccc-------------------------------cCCCcccccCCCcE
Confidence 89888753 2 599999999999776644311 11345999999999
Q ss_pred EEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEec
Q psy14338 475 MTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGS 554 (1761)
Q Consensus 475 ~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR 554 (1761)
++|+|++++ ++|.|++|||+|+|+++++||||+|++|+++|. +|||||||+|++++||+|+|+||
T Consensus 332 ~~i~d~~~~--~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~-------------~g~~~TGDl~~~~~dG~l~~~GR 396 (509)
T 3ivr_A 332 VAVVDAEDR--PLPPGEVGEIVLRGPTVFKGYWNNAAATQHAFR-------------NGWHHTGDMGRFDADGYLFYAGR 396 (509)
T ss_dssp EEEECTTSC--BCCTTCCEEEEEESTTSCCEETTCHHHHHHHTG-------------GGSEEEEEEEEECTTSCEEEEEE
T ss_pred EEEECCCCC--CCCCCCceEEEEecCCccccccCCHHHhHHHhh-------------cCCcccccEEEECCCceEEEeCC
Confidence 999999987 699999999999999999999999999999995 78999999999999999999999
Q ss_pred c--CCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHHHHHHHhh
Q psy14338 555 R--DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMSRVLQAVD 629 (1761)
Q Consensus 555 ~--d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~~~Lp~y~ 629 (1761)
+ ||+||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++++++..++ .+.++++++|+++||.||
T Consensus 397 ~d~~d~ik~~G~~v~p~eiE~~l~~~p~V-----~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~l~~~l~~~L~~~~ 471 (509)
T 3ivr_A 397 APEKELIKTGGENVYPAEVEGALKQHPAI-----ADAVVIGVPDPQWSEAIKAVCVCKPGESIAADALAEFVASLIARYK 471 (509)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred CCcceeEEECCEEECHHHHHHHHHhCCCc-----eeEEEEeccccccCcEEEEEEEeCCCCCCCHHHHHHHHHhhCcccC
Confidence 9 99999999999999999999999888 79999999854 57889999887654 677899999999999999
Q ss_pred hcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 630 SIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 630 ~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
+|+.+ +.+++||+|+||||||++|++.+.+.
T Consensus 472 ~P~~i-------~~v~~lP~t~~GKidr~~Lr~~~~~~ 502 (509)
T 3ivr_A 472 KPKHV-------VFVEALPKDAKGAIDRAAVKTAHGQE 502 (509)
T ss_dssp --------------------------------------
T ss_pred CCcEE-------EEecCCCCCCCCCccHHHHHHHHhhc
Confidence 99986 55699999999999999999987653
|
| >2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-72 Score=726.43 Aligned_cols=497 Identities=15% Similarity=0.200 Sum_probs=413.2
Q ss_pred hhHHH-HHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEA-AIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~-~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.++.+ +|.++++++ +++|+++.+. + +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++
T Consensus 25 ~~l~~~~l~~~~~~~-~~~A~~~~~~-~---~~~Ty~el~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e 89 (548)
T 2d1s_A 25 AGTQLRKYMERYAKL-GAIAFTNAVT-G---VDYSYAEYLEKSCCLGKALQ--------NYGLVVDGRIALCSENC--EE 89 (548)
T ss_dssp HHHHHHHHHHHHHHH-TCEEEEETTT-C---CEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEEECSSC--TT
T ss_pred CcHHHHHHHhhhccc-CCceEEEcCC-C---CEeeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCc--hh
Confidence 58999 899999999 9999986421 2 58999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc-----cccceeccCCCc-ceeE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA-----AGEVVAFKGWPK-LTWF 233 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~ 233 (1761)
+++++|||+++|+++||++|.++.+ |+.+++++++++++|+++...+.+.... ...++.++.... ..+.
T Consensus 90 ~~~~~la~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (548)
T 2d1s_A 90 FFIPVIAGLFIGVGVAPTNEIYTLR-----ELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGYQ 164 (548)
T ss_dssp THHHHHHHHHHTCEEEEECTTSCHH-----HHHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCSSCBTTBC
T ss_pred HHHHHHHHHhhCCEEeccCCCCCHH-----HHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCcccccccc
Confidence 9999999999999999999999976 8999999999999999987654332211 011111111100 0000
Q ss_pred -EeccccCCCCCCCCCCCCC-----C-CCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH---cCCCCCCeEEEccC
Q psy14338 234 -VTEHLAKTPKDWAPQPRLT-----D-DTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA---CHYTEGENMVCVLD 303 (1761)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~-----~-~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~~ 303 (1761)
..+..........+..... + +++|||+|||||||+||||+++|+++.+.+.+.... ++++++|++++++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 244 (548)
T 2d1s_A 165 CLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVP 244 (548)
T ss_dssp BHHHHHHHTSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSC
T ss_pred cHHHHHhcCccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEecc
Confidence 0011111000000111112 4 899999999999999999999999999988887766 78899999999999
Q ss_pred CcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecC
Q psy14338 304 FKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGD 383 (1761)
Q Consensus 304 ~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg 383 (1761)
++|+++++..++.+| .|+++++.+ .+++..+++.|+++++|+++++| +++..++........++++||.+++|
T Consensus 245 ~~h~~g~~~~~~~~l-~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~l~~lr~i~~g- 317 (548)
T 2d1s_A 245 FHHGFGMFTTLGYLI-CGFRVVMLT----KFDEETFLKTLQDYKCTSVILVP-TLFAILNKSELLNKYDLSNLVEIASG- 317 (548)
T ss_dssp TTSHHHHHHHHHHHH-TTCEEEECC----CCCHHHHHHHHHHTTEEEEEECH-HHHHHHHHCSCGGGSCCTTCCEEEEC-
T ss_pred HHHHHHHHHHHHHHh-cCcEEEEcC----CCCHHHHHHHHHHcCCcEEEecH-HHHHHHHhCcccccccccceeEEEEc-
Confidence 999999986466777 999999998 68999999999999999999996 58888877665555678999999999
Q ss_pred CCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccc
Q psy14338 384 GANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTL 463 (1761)
Q Consensus 384 ~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1761)
|+++++++.++|.+.++. . .++|.||+||++.+++..+.. ....
T Consensus 318 -G~~l~~~~~~~~~~~~~~--~---~i~~~YG~TE~~~~~~~~~~~------------------------------~~~~ 361 (548)
T 2d1s_A 318 -GAPLSKEVGEAVARRFNL--P---GVRQGYGLTETTSAIIITPEG------------------------------DDKP 361 (548)
T ss_dssp -SSCCCHHHHHHHHHHTTC--S---CCEEEEECGGGSSEEEECCTT------------------------------CCCT
T ss_pred -CccCCHHHHHHHHHHcCC--C---ceeeccccccccceeeecCcc------------------------------cCCC
Confidence 999999999999998852 2 499999999998766643211 1245
Q ss_pred cccCCCCCCcEEEEEe-CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEE
Q psy14338 464 QDCGQVMPGCIMTVVK-MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGF 542 (1761)
Q Consensus 464 ~~iG~p~~~~~~~I~d-~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~ 542 (1761)
+++|+|+++++++|+| ++++ ++|.|+.|||+|+|+++++||||+|++|+++|. .+|||||||+|+
T Consensus 362 ~~~G~~~~~~~~~i~d~~~~~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~------------~~g~~~TGDl~~ 427 (548)
T 2d1s_A 362 GASGKVVPLFKAKVIDLDTKK--SLGPNRRGEVCVKGPMLMKGYVNNPEATKELID------------EEGWLHTGDIGY 427 (548)
T ss_dssp TCCBEECTTCEEEEECTTTCC--BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBC------------TTSCEEEEEEEE
T ss_pred CCCCccCCCceEEEEeCCcCc--cCCCCCCeEEEECCHHHhhhhcCChHHhhhccc------------CCcEEEccCEEE
Confidence 7899999999999999 5565 699999999999999999999999999999994 378999999999
Q ss_pred EeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHH
Q psy14338 543 LGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQ 619 (1761)
Q Consensus 543 ~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~ 619 (1761)
+++||+|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|++++.++ .+.+++++
T Consensus 428 ~~~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V-----~~a~V~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~ 502 (548)
T 2d1s_A 428 YDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPSI-----FDAGVAGVPDPVAGELPGAVVVLESGKNMTEKEVMD 502 (548)
T ss_dssp ECTTCCEEEEEEGGGCBCBTTCCBCHHHHHHHHHTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHH
T ss_pred EcCCCeEEEeccccceEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEEcCCCCeeeEEEEEEcCCCCCCHHHHHH
Confidence 999999999999999999999999999999999998888 79999999854 67889999987654 67899999
Q ss_pred HHHHHHHHhhhcc-eeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 620 WMSRVLQAVDSIH-QVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 620 ~l~~~Lp~y~~P~-~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+|+++|+.||+|. .+ +.+++||+|+|||+||++|++.+.+
T Consensus 503 ~~~~~l~~~~~p~~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 543 (548)
T 2d1s_A 503 YVASQVSNAKRLRGGV-------RFVDEVPKGLTGKIDGRAIREILKK 543 (548)
T ss_dssp HHHTTSCGGGSCTTCE-------EECSSCCBCTTSCBCHHHHHHHHHS
T ss_pred HHHHhccccccccccE-------EEccCCCCCCcchhHHHHHHHHHhh
Confidence 9999999999999 76 4469999999999999999998864
|
| >1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-72 Score=732.39 Aligned_cols=507 Identities=17% Similarity=0.187 Sum_probs=376.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
+.++.++|+++++++||++|+.+.+.++. +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++
T Consensus 17 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~e 84 (541)
T 1v25_A 17 ELNLWDFLERAAALFGRKEVVSRLHTGEV--HRTTYAEVYQRARRLMGGLR--------ALGVGVGDRVATLGFNH--FR 84 (541)
T ss_dssp CCCTHHHHHHHHHHSTTCEEEEECTTSCE--EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HH
T ss_pred CCCHHHHHHHHHHhCCCceEEEEecCCCC--ceecHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCc--HH
Confidence 35799999999999999999986442222 68999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCcceeEE
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPKLTWFV 234 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 234 (1761)
+++++|||+|+|+++||++|.++.+ |+.+++++++++++|+++.....+..... ..++..+.........
T Consensus 85 ~~~~~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (541)
T 1v25_A 85 HLEAYFAVPGMGAVLHTANPRLSPK-----EIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLA 159 (541)
T ss_dssp HHHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEE
T ss_pred HHHHHHHHHhcCcEEEecCcccCHH-----HHHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCCCCccccc
Confidence 9999999999999999999999976 99999999999999999875443322110 0111111100000000
Q ss_pred eccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHH--HHHcCCCCCCeEEEccCCcchhhhHH
Q psy14338 235 TEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRAL--TQACHYTEGENMVCVLDFKRETGLWH 312 (1761)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~ 312 (1761)
.+....... ......++++|||+|||||||+||||+++|+++++..... ...++++++|++++++|++|+.++..
T Consensus 160 ~~~~~~~~~---~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~ 236 (541)
T 1v25_A 160 YEEALGEEA---DPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCL 236 (541)
T ss_dssp HHHHCCSCC---CCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTH
T ss_pred HHHHhhccC---CcccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHHHH
Confidence 111111111 1134568999999999999999999999999998776652 34567899999999999999999874
Q ss_pred HHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHH
Q psy14338 313 SVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSS 392 (1761)
Q Consensus 313 ~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~ 392 (1761)
++.+++.|+++++.+. .+++..+++.|+++++|+++++| +++..++........++++||.+++| |+++++++
T Consensus 237 -~~~~l~~G~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~l~~lr~i~~g--G~~l~~~~ 309 (541)
T 1v25_A 237 -PYAATLVGAKQVLPGP---RLDPASLVELFDGEGVTFTAGVP-TVWLALADYLESTGHRLKTLRRLVVG--GSAAPRSL 309 (541)
T ss_dssp -HHHHHHHTCEEEECTT---CCSHHHHHHHHHHTTCCEEEECH-HHHHHHHHHHHHHTCCCSSCCEEEEC--SSCCCHHH
T ss_pred -HHHHHhcCceEEeeCC---CCCHHHHHHHHHhcCeeEEecch-HHHHHHHhhhhccCCcchhccEEEEC--CCCCCHHH
Confidence 8999999999999874 47999999999999999999996 57777766543334568899999999 99999999
Q ss_pred HHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCC-ccCcccccccCCCCC
Q psy14338 393 CDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQEN-SLTSLTLQDCGQVMP 471 (1761)
Q Consensus 393 ~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~iG~p~~ 471 (1761)
.++| +.+ |++ ++|.||+||++.+++........ .... ........++|+|++
T Consensus 310 ~~~~-~~~---g~~---~~~~YG~TE~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~G~p~~ 362 (541)
T 1v25_A 310 IARF-ERM---GVE---VRQGYGLTETSPVVVQNFVKSHL--------------------ESLSEEEKLTLKAKTGLPIP 362 (541)
T ss_dssp HHHH-HHT---TCE---EEEEEECGGGSSEEEECCCCGGG--------------------TTSCHHHHHHHHTSCBEECT
T ss_pred HHHH-HHh---CCc---eeecccccccccceecccccccc--------------------cccCccccccccCCCCCcCC
Confidence 9999 555 553 99999999998776654311000 0000 000123578999999
Q ss_pred CcEEEEEeCCCCcccCCC--CCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeE
Q psy14338 472 GCIMTVVKMDSPSYLCKT--DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLV 549 (1761)
Q Consensus 472 ~~~~~I~d~~~~~~~~p~--G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l 549 (1761)
|++++|+|+++++ +|. |++|||+|+||++++||||+|++|+++|. .+|||||||+|++|+||+|
T Consensus 363 ~~~~~i~d~~g~~--~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~------------~~g~~~TGDlg~~d~dG~l 428 (541)
T 1v25_A 363 LVRLRVADEEGRP--VPKDGKALGEVQLKGPWITGGYYGNEEATRSALT------------PDGFFRTGDIAVWDEEGYV 428 (541)
T ss_dssp TCEEEEECTTSCB--CCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBC------------TTSCEEEEEEEEECTTCCE
T ss_pred CcEEEEECCCCCC--CCCCCCcceEEEEeCcchhccccCChhhhhhhcc------------CCCCeEcCCEEEEcCCceE
Confidence 9999999999874 664 47999999999999999999999999994 3789999999999999999
Q ss_pred EEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC-CCCHHHHHHHHHH-HHH
Q psy14338 550 FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP-DCSEEESFQWMSR-VLQ 626 (1761)
Q Consensus 550 ~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~-~~~~~~l~~~l~~-~Lp 626 (1761)
+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|++++.. ..+.+++++++++ +||
T Consensus 429 ~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V-----~~a~Vv~~~~~~~~~~~~a~vv~~~~~~~~~~l~~~~~~~~L~ 503 (541)
T 1v25_A 429 EIKDRLKDLIKSGGEWISSVDLENALMGHPKV-----KEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEHLLKAGFA 503 (541)
T ss_dssp EEEEESSCEEEETTEEEEHHHHHCC---------------CEEEEECSSSSEEEEECC-------------------CCC
T ss_pred EEeecccceeeeCCEEECHHHHHHHHHhCCCc-----eEEEEEEecCCCcCceEEEEEEECCCCCCHHHHHHHHHhccCc
Confidence 99999999999999999999999999998888 79999999854 6788999998753 3567889999999 899
Q ss_pred HhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 627 AVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 627 ~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
.||+|..+ +.+++||+|+|||+||++|++.+.+
T Consensus 504 ~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 536 (541)
T 1v25_A 504 KWQLPDAY-------VFAEEIPRTSAGKFLKRALREQYKN 536 (541)
T ss_dssp TTTSCSBC---------------------CCTTHHHHSTT
T ss_pred cccCCcEE-------EEeCCCCCCCccCeeHHHHHHHHHH
Confidence 99999987 5569999999999999999998643
|
| >3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-72 Score=723.15 Aligned_cols=498 Identities=17% Similarity=0.239 Sum_probs=411.8
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+++. ++|+++|+++.+ .++++||+||+++++++|++|++. |+++||+|+|+++|++++++++|
T Consensus 22 ~~l~~~l~~~a~-----~~p~~~a~~~~~---~~~~~Ty~el~~~~~~lA~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~l 92 (536)
T 3ni2_A 22 LPLHSYVLENLS-----NHSSKPCLINGA---NGDVYTYADVELTARRVASGLNKI-GIQQGDVIMLFLPSSPEFVLAFL 92 (536)
T ss_dssp CCHHHHHTTTGG-----GSTTSEEEEETT---TCCEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHHHHH
T ss_pred CcHHHHHHHHhh-----cCCCceEEEECC---CCCEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHH
Confidence 567888877765 779999998421 357899999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc---cccccccCCc-cccCCCC-ccc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS---NVVDIKSWPT-ILDTDDM-PKK 1317 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~-~~~ 1317 (1761)
||+++|++++|++|.+|.+ ++.+++++++++++|++......+...... ..+....... ....... ...
T Consensus 93 a~~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (536)
T 3ni2_A 93 GASHRGAIITAANPFSTPA------ELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFSELTQAD 166 (536)
T ss_dssp HHHHHTCEEEECCTTCCHH------HHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCCCTTCEETHHHHTSC
T ss_pred HHHHhCCEEeccCCCCCHH------HHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCCCCCccCHHHHhhcc
Confidence 9999999999999988877 999999999999999998765554432211 1111110000 0000000 000
Q ss_pred hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHH----HcCcCCCCeEEEEeCCccChhHHHHHHHHh
Q psy14338 1318 KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----ACELYPSRHIALCLDPYCGLGFALWVLSSV 1393 (1761)
Q Consensus 1318 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L 1393 (1761)
....+.....++++|||+|||||||+||||+++|+++++.+..... .+++.++|+++.++|++|.+++...++.+|
T Consensus 167 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l 246 (536)
T 3ni2_A 167 ENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLCGL 246 (536)
T ss_dssp GGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTHHHHH
T ss_pred ccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHHHHHH
Confidence 1112233467899999999999999999999999999998776654 456788999999999999988877789999
Q ss_pred hcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHH
Q psy14338 1394 YSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473 (1761)
Q Consensus 1394 ~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~ 1473 (1761)
..|+++++.+. +++..+++.|+++++|+++++|+++..+++.. .....++++||.+++|||++++ .+.
T Consensus 247 ~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~l~~lr~i~~gGe~l~~-~~~ 314 (536)
T 3ni2_A 247 RVGAPILIMPK----FEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSP-------DLDKHDLSSLRMIKSGGAPLGK-ELE 314 (536)
T ss_dssp HHTCCEEECSS----CCHHHHHHHHHHHTCCEEEECHHHHHHHHTCS-------CGGGSCCTTCCEEEEESSCCCH-HHH
T ss_pred hcCCEEEEcCC----CCHHHHHHHHHHhCCeEEEccHHHHHHHHhCc-------ccccCCCccceEEEECCCCCCH-HHH
Confidence 99999999874 78999999999999999999999999997632 2345678999999999999999 888
Q ss_pred HHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEE
Q psy14338 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVI 1553 (1761)
Q Consensus 1474 ~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 1553 (1761)
++|.+.++. ..+++.||+||++.++....... ..+...+.+++|+|++|++++
T Consensus 315 ~~~~~~~~~-----~~l~~~YG~TE~~~~~~~~~~~~----------------------~~~~~~~~~~~G~~~~~~~~~ 367 (536)
T 3ni2_A 315 DTVRAKFPQ-----ARLGQGYGMTEAGPVLAMCLAFA----------------------KEPFDIKPGACGTVVRNAEMK 367 (536)
T ss_dssp HHHHHHCTT-----SEEEEEEECGGGSSEEEECGGGS----------------------SSCCCCCTTCCCEECSSCEEE
T ss_pred HHHHHHCCC-----CCccccccccccchhhhcccccC----------------------CccccCCCCCeeEeCCCcEEE
Confidence 888887743 68999999999876544321100 001112235699999999999
Q ss_pred EEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCC
Q psy14338 1554 IANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633 (1761)
Q Consensus 1554 v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~ 1633 (1761)
|+|+++++++|.|++|||+|+|+++++|||| +|+.|++.| +++|||||||+|++ |+|
T Consensus 368 i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~---~p~~t~~~~--------~~~g~~~TGDl~~~------~~d------ 424 (536)
T 3ni2_A 368 IVDPETGASLPRNQPGEICIRGDQIMKGYLN---DPEATSRTI--------DKEGWLHTGDIGYI------DDD------ 424 (536)
T ss_dssp EECTTTCCBCCTTCCEEEEEESTTSCSEETT---CHHHHHHHB--------CTTSCEEEEEEEEE------CTT------
T ss_pred EEeCCCCcCCCCCCccEEEEeCcccchhhcC---ChhHHHhhc--------cCCCceEcccEEEE------cCC------
Confidence 9998889999999999999999999999999 999999999 46899999999999 999
Q ss_pred CCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHH
Q psy14338 1634 GVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLV 1707 (1761)
Q Consensus 1634 g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l 1707 (1761)
|+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+.. +...+.++|+++|
T Consensus 425 --G~----l~~~GR~dd~ik~~G~~v~p~eIE~-~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l 497 (536)
T 3ni2_A 425 --DE----LFIVDRLKELIKYKGFQVAPAELEA-LLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEIKQYI 497 (536)
T ss_dssp --SC----EEEEEECSCCEEETTEEECHHHHHH-HHHTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHH
T ss_pred --ce----EEEEecccceEEECCEEECHHHHHH-HHHhCCCcceEEEEeeecCCCCceeEEEEEecCCCCCCHHHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 34678888764 4456778999999
Q ss_pred HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1708 ~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
+++ || .||+|+.|++++ +||+|+||||||++|++++.
T Consensus 498 ~~~-l~-~~~~p~~i~~v~--~lP~t~~GKi~R~~L~~~~~ 534 (536)
T 3ni2_A 498 SKQ-VI-FYKRIKRVFFIE--AIPKAPSGKILRKNLKEKLA 534 (536)
T ss_dssp HTT-SC-GGGCCSEEEECS--CCCBCTTSCBCHHHHHTC--
T ss_pred HHh-cc-CCccccEEEEEe--cCCCCCCCCeeHHHHHHHhc
Confidence 997 88 999999999999 99999999999999998763
|
| >3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-72 Score=726.88 Aligned_cols=497 Identities=13% Similarity=0.157 Sum_probs=407.1
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|+++++++|+++|+.+.+ +++||+||+++++++|++|+ +.|+++||+|+|+++|+ +++
T Consensus 4 ~~l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~lA~~L~--------~~g~~~gd~V~i~~~n~--~~~ 67 (521)
T 3l8c_A 4 KDMIDSIEQFAQTQADFPVYDCLG------ERRTYGQLKRDSDSIAAFID--------SLALLAKSPVLVFGAQT--YDM 67 (521)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HTCCCTTCCEEEEECSS--HHH
T ss_pred HHHHHHHHHHHHHCCCCcceecCC------CeecHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEeCCC--HHH
Confidence 578999999999999999999765 79999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccC
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAK 240 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1761)
++++|||+++|+++||+||.++.+ |+.+++++++++++|+++.....+.... .+.... ......
T Consensus 68 ~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~il~~~~~~~ii~~~~~~~~~~~~~---~~~~~~--------~~~~~~ 131 (521)
T 3l8c_A 68 LATFVALTKSGHAYIPVDVHSAPE-----RILAIIEIAKPSLIIAIEEFPLTIEGIS---LVSLSE--------IESAKL 131 (521)
T ss_dssp HHHHHHHHHTTCCEEEEETTSCHH-----HHHHHHHHSCCSEEEESSCCCSCCTTSE---EEEHHH--------HHHHHH
T ss_pred HHHHHHHHHhCCEEEecCccccHH-----HHHHHHHhCCCCEEEecCccccccccCc---ccchhh--------hhhccc
Confidence 999999999999999999999976 9999999999999999887544332211 110000 000000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH--cCCCCCCeEEEccCCcchhhhHHHHHHHH
Q psy14338 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA--CHYTEGENMVCVLDFKRETGLWHSVLTSV 318 (1761)
Q Consensus 241 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~i~~~L 318 (1761)
............++|+|||+|||||||+||||+++|+++++.+.+.... +++.+++++++++|++|+.+++. ++.+|
T Consensus 132 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~l 210 (521)
T 3l8c_A 132 AEMPYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSVMY-WAPTL 210 (521)
T ss_dssp HTCCCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGHHH-HHHHH
T ss_pred ccCCcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHHHH-HHHHH
Confidence 0111122344678999999999999999999999999999988877765 77889999999999999999985 99999
Q ss_pred hcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHH
Q psy14338 319 LNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLS 398 (1761)
Q Consensus 319 ~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~ 398 (1761)
..|+++++.+... ..++..+++.|.++++|++..+| +++..++........++++||.+++| |+++++++.++|.+
T Consensus 211 ~~G~~~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~g--G~~l~~~~~~~~~~ 286 (521)
T 3l8c_A 211 ALGGTLFALPKEL-VADFKQLFTTIAQLPVGIWTSTP-SFADMAMLSDDFCQAKMPALTHFYFD--GEELTVSTARKLFE 286 (521)
T ss_dssp HTTCEEEECCGGG-TTCHHHHHHHHHHSCCSEEEECH-HHHHHHHTSTTCSTTTCTTCCEEEEC--SSCCCHHHHHHHHH
T ss_pred hcCCEEEEcCHHH-hhCHHHHHHHHHHcCCcEEEeCC-CHHHHHhhhhccccccCccceEEEEe--cccCCHHHHHHHHH
Confidence 9999999988432 45899999999999999999996 47777777666666778999999999 99999999999999
Q ss_pred HhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEE
Q psy14338 399 VFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478 (1761)
Q Consensus 399 ~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~ 478 (1761)
.++. . .++|.||+||++++++..... ..........++|+|++|++++|+
T Consensus 287 ~~~~--~---~i~~~YG~TE~~~~~~~~~~~-------------------------~~~~~~~~~~~vG~p~~~~~~~i~ 336 (521)
T 3l8c_A 287 RFPS--A---KIINAYGPTEATVALSAIEIT-------------------------REMVDNYTRLPIGYPKPDSPTYII 336 (521)
T ss_dssp HCTT--C---EEEEEECCGGGSSCSEEEEEC-------------------------HHHHHHCSSCEEEEECTTSCEEEE
T ss_pred HCCC--c---eEEeCcCccHHhhhhceeecc-------------------------cccccCCCccccccccCCCEEEEE
Confidence 8853 2 499999999998655432210 000001235689999999999999
Q ss_pred eCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCe
Q psy14338 479 KMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGL 558 (1761)
Q Consensus 479 d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~q 558 (1761)
|++++ ++|.|++|||+|+||++++||||+|++|+++|... ++++||||||+|++|+||+++|+||+|||
T Consensus 337 d~~g~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~---------~~~~~~~TGDlg~~d~dG~l~~~GR~~d~ 405 (521)
T 3l8c_A 337 DEDGK--ELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTF---------KGQPAYHTGDIGSLTEDNILLYGGRLDFQ 405 (521)
T ss_dssp CTTSC--BCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEEEE---------TTEEEEEEEEEEEECSSSCEEEEEEGGGB
T ss_pred CCCcC--CCCCCCceEEEecccccChhhcCCchHhhccCcCC---------CCceeeeCCCEEEEeCCCeEEEeCcccce
Confidence 99987 59999999999999999999999999999999632 24789999999999999999999999999
Q ss_pred EEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC--CCceEEEEEEeCCCCC---------HHHHHHHHHHHHHH
Q psy14338 559 MTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL--RDERICVIAEQRPDCS---------EEESFQWMSRVLQA 627 (1761)
Q Consensus 559 vki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~--~~~~l~a~v~~~~~~~---------~~~l~~~l~~~Lp~ 627 (1761)
||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|+++..++.. .++++++|+++||.
T Consensus 406 i~~~G~~v~p~eIE~~l~~~p~V-----~~a~vv~~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 480 (521)
T 3l8c_A 406 IKYAGYRIELEDVSQQLNQSPMV-----ASAVAVPRYNKEHKVQNLLAYIVVKDGVKERFDRELELTKAIKASVKDHMMS 480 (521)
T ss_dssp CC-----CBHHHHHHHHHTSTTE-----EEEEEECCCSSSCC---CEEEEEECTTSGGGCSSHHHHHHHHHHHSGGGSCG
T ss_pred EeECCEEeCHHHHHHHHHcCCCc-----ceEEEEEeecCCCCceEEEEEEEecCccccccccchhhHHHHHHHHHhhCcc
Confidence 99999999999999999998888 68888887632 4578999999877632 46899999999999
Q ss_pred hhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 628 VDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 628 y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
||+|..+ +.+++||+|+||||||++|++.+.+.
T Consensus 481 ~~~P~~i-------~~v~~lP~t~~GKidr~~L~~~~~~~ 513 (521)
T 3l8c_A 481 YMMPSKF-------LYRDSLPLTPNGKIDIKTLINEVNNR 513 (521)
T ss_dssp GGSCSEE-------EECSSCCBCTTSSBCHHHHHHHTC--
T ss_pred ccCCeEE-------EEecccCCCCCcCccHHHHhhhhhcC
Confidence 9999986 55699999999999999999987653
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-71 Score=731.56 Aligned_cols=554 Identities=21% Similarity=0.336 Sum_probs=431.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..++.++|+++|+++||++|+++.++++. +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++
T Consensus 10 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~--~~~Ty~eL~~~~~~lA~~L~--------~~gv~~gd~V~i~~~~~--~~ 77 (590)
T 3kxw_A 10 CQSLVDVVRLRALHSPNKKSCTFLNKELE--ETMTYEQLDQHAKAIAATLQ--------AEGAKPGDRVLLLFAPG--LP 77 (590)
T ss_dssp CSSHHHHHHHHHHHCTTSEEEEEEETTEE--EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HH
T ss_pred cccHHHHHHHHHHhCCCCeEEEEEcCCee--EEEcHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCc--hh
Confidence 36899999999999999999998763222 79999999999999999999 88999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
+++++|||+++|+++||++|.++.. +.+++.++++++++++++++......+........... ....+...+...
T Consensus 78 ~~~~~lA~~~~G~~~vpl~~~~~~~--~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 152 (590)
T 3kxw_A 78 LIQAFLGCLYAGCIAVPIYPPAQEK--LLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKF---LKIPAIALESIE 152 (590)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCSHH--HHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEE---TTEEEEEGGGCC
T ss_pred HHHHHHHHHHhCcEEEEecCCCchH--HHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcccc---cccceeechhcc
Confidence 9999999999999999999988532 24589999999999999998875544332210000000 001111111111
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHh
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVL 319 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~ 319 (1761)
.............++|+|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|++|++..++.+|+
T Consensus 153 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 232 (590)
T 3kxw_A 153 LNRSSSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDMGLIGCILTPIY 232 (590)
T ss_dssp GGGGGGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHTTTHHHHH
T ss_pred ccccccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcchhhHHHHHHHHh
Confidence 11111122345678999999999999999999999999999999999999999999999999999999999855899999
Q ss_pred cCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC---CCCCCCCCCceeEEEecCCCccCCHHHHHHH
Q psy14338 320 NGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT---KDHKDISLSSLRLLLVGDGANPWSLSSCDQF 396 (1761)
Q Consensus 320 ~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~---~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~ 396 (1761)
.|+++++.++..+..+|..+++.|+++++|++..+| +++..++.. ......++++||.+++| |+++++++.++|
T Consensus 233 ~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p-~~~~~l~~~~~~~~~~~~~l~~lr~~~~g--g~~l~~~~~~~~ 309 (590)
T 3kxw_A 233 GGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPN-FAYDYCVKRIREEKKEGLDLSSWVTAFNG--AEPVREETMEHF 309 (590)
T ss_dssp HTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECT-HHHHHHHHHCCGGGGTTCCCTTCCEEEEC--SSCCCHHHHHHH
T ss_pred cCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCCh-hHHHHHHHHhhhhhccCCCchhhHHHhhC--CCCCCHHHHHHH
Confidence 999999988422222899999999999999999876 466555442 33445678999999999 999999999999
Q ss_pred HHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEE
Q psy14338 397 LSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMT 476 (1761)
Q Consensus 397 ~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 476 (1761)
.+.++..|++...++|.||+||++.+++......... ...+....+....+..............++|+|+++ ++
T Consensus 310 ~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~ 384 (590)
T 3kxw_A 310 YQAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYK---TLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VK 384 (590)
T ss_dssp HHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCC---EEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EE
T ss_pred HHHHHHcCCCccccccccccccccceeecccCCCCce---eeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eE
Confidence 9998765655456999999999998766543210000 000000000011111111112223457899999998 89
Q ss_pred EEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccC
Q psy14338 477 VVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRD 556 (1761)
Q Consensus 477 I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d 556 (1761)
|+|+++. .++|.|++|||+|+||++++||||+|++|+++|..+++... ++.+||||||+|+++ ||.|+|+||+|
T Consensus 385 i~d~~~~-~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~----~g~~~~~TGDlg~~d-dG~l~~~GR~d 458 (590)
T 3kxw_A 385 IIDPDTL-IPCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDE----RSAIYLRTGDLGFLH-ENELYVTGRIK 458 (590)
T ss_dssp EECTTTC-CBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC-------CCBEEEEEEEEEE-TTEEEEEEESS
T ss_pred EEcCCCC-cCCCCCCEEEEEEeCCcccccccCChhHHHHHHhccccCCC----CCCcEEecCcEEEEE-CCEEEEEcCcc
Confidence 9998843 36999999999999999999999999999999987766432 135699999999999 99999999999
Q ss_pred CeEEECCcccChHHHHHHHHhcCCccccccc--eEEEEEEecCCCceEEEEEEeCCC----CCHHHHHHHHHHHHHH-hh
Q psy14338 557 GLMTVTGRKHNADDIIATVLAVEPMKFIYRG--RIAVFSIRVLRDERICVIAEQRPD----CSEEESFQWMSRVLQA-VD 629 (1761)
Q Consensus 557 ~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~--~a~v~~~~~~~~~~l~a~v~~~~~----~~~~~l~~~l~~~Lp~-y~ 629 (1761)
||||++|+||+|.|||++|+..++.+ . +|+|+++++..++.++++++...+ .+.++++++|++.|+. |+
T Consensus 459 d~Ik~~G~~v~p~eIE~~l~~~~~~v----~~~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 534 (590)
T 3kxw_A 459 DLIIIYGKNHYPQDIEFSLMHSPLHH----VLGKCAAFVIQEEHEYKLTVMCEVKNRFMDDVAQDNLFNEIFELVYENHQ 534 (590)
T ss_dssp CHHHHHHHTTHHHHHHHHHHHSGGGG----GEEEEEEEEEEETTEEEEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred ceEEECCEecCHHHHHHHHHhcCccc----cCccEEEEEecCCCCceEEEEEEeccccccchhHHHHHHHHHHHHHHHcC
Confidence 99999999999999999994444442 4 789999987778889999888765 3567899999999996 88
Q ss_pred hcc-eeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcCCCCcce
Q psy14338 630 SIH-QVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEGNLHPAN 673 (1761)
Q Consensus 630 ~P~-~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~~~~~~~ 673 (1761)
+|. .+ .|+++++||+|+||||||++|++.+.++.++...
T Consensus 535 ~p~~~i-----~~v~~~~lP~t~sGKi~R~~L~~~~~~~~~~~~~ 574 (590)
T 3kxw_A 535 LEVHTI-----VLIPLKAMPHTTSGKIRRNFCRKHLLDKTLPIVA 574 (590)
T ss_dssp CCCCEE-----EEEETTCSCCCSCHHHHHHHHHHHHHHTCSCCSE
T ss_pred CceeEE-----EEECCCccCcCCCcHHHHHHHHHHHHcCCCceee
Confidence 886 33 4777899999999999999999999988877543
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-72 Score=730.26 Aligned_cols=502 Identities=16% Similarity=0.227 Sum_probs=321.4
Q ss_pred chhHHHHHHHHhhhcCCCcEEEE-ECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCch
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATV-LDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPI 158 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~-~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~ 158 (1761)
..++.++|.++++++|+++|++. .++.+. +++||+||+++++++|+.|+ +.|+++||+|+|+++|| +
T Consensus 19 ~~tl~~~l~~~a~~~p~~~a~~a~~~~~~~--~~~Ty~el~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~ 86 (550)
T 3rix_A 19 DGTAGEQLHKAMKRYALVPGTIAFTDAHIE--VNITYAEYFEMSVRLAEAMK--------RYGLNTNHRIVVCSENS--L 86 (550)
T ss_dssp CSCHHHHHHHHHHHHHTSTTCEEEEETTTC--CEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEEECSSC--T
T ss_pred cCCHHHHHHHHHHhCCCCceEEEeeecCCC--cEeEHHHHHHHHHHHHHHHH--------HhCCCCCCEEEEEcCCc--c
Confidence 46899999999999999999763 222221 58999999999999999999 89999999999999999 9
Q ss_pred hHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCCcc-ee
Q psy14338 159 NFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWPKL-TW 232 (1761)
Q Consensus 159 ~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~ 232 (1761)
++++++|||+++|+++||+||.++.+ |+.+++++++++++|+++.....+..... ..++..+..... .+
T Consensus 87 e~~~~~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (550)
T 3rix_A 87 QFFMPVLGALFIGVAVAPANDIYNER-----ELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGF 161 (550)
T ss_dssp TTHHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTB
T ss_pred cHHHHHHHHHHcCCEEeecCCcCCHH-----HHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCCccccCc
Confidence 99999999999999999999999976 89999999999999999875543322110 111111110000 00
Q ss_pred EE-eccc----cCCC--CCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH---cCCCCCCeEEEcc
Q psy14338 233 FV-TEHL----AKTP--KDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA---CHYTEGENMVCVL 302 (1761)
Q Consensus 233 ~~-~~~~----~~~~--~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~ 302 (1761)
.. .+.. .... ....+.....++++|||+|||||||+||||+++|+++++.+.+.... +++.++|++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (550)
T 3rix_A 162 QSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVV 241 (550)
T ss_dssp CBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECS
T ss_pred ccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEec
Confidence 00 0000 0000 01112222346889999999999999999999999999888776654 5788999999999
Q ss_pred CCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEec
Q psy14338 303 DFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVG 382 (1761)
Q Consensus 303 ~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~g 382 (1761)
|++|+++++. ++.+|+.|+++++.+ .+++..+++.|+++++|+++++| +++..++........++++||.+++|
T Consensus 242 p~~~~~g~~~-~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~l~~lr~i~~g 315 (550)
T 3rix_A 242 PFHHGFGMFT-TLGYLICGFRVVLMY----RFEEELFLRSLQDYKIQSALLVP-TLFSFFAKSTLIDKYDLSNLHEIASG 315 (550)
T ss_dssp CTTSHHHHHH-HHHHHHHTCEEEECS----SCCHHHHHHHHHHTTCSEEEECH-HHHHHHHHCCGGGGSCCTTCCEEEEC
T ss_pred hHHHHHHHHH-HHHHHHcCCEEEEeC----CCCHHHHHHHHHHcCCeEEEeCc-HHHHHHHhCccccccCcccccEEEEe
Confidence 9999999985 899999999999998 68999999999999999999996 58888887766667789999999999
Q ss_pred CCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCccc
Q psy14338 383 DGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLT 462 (1761)
Q Consensus 383 g~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1761)
|+++++++.++|.+.++ .. .++|.||+||++.+++..+.. ...
T Consensus 316 --G~~l~~~~~~~~~~~~~---~~--~v~~~YG~TE~~~~~~~~~~~------------------------------~~~ 358 (550)
T 3rix_A 316 --GAPLSKEVGEAVAKRFH---LP--GIRQGYGLTETTSAILITPEG------------------------------DDK 358 (550)
T ss_dssp --SSCCCHHHHHHHHHHTT---CS--CCEEEEECGGGSSEEEECCTT------------------------------CCC
T ss_pred --cCCCCHHHHHHHHHHcC---CC--ccccccCcCccccceecCCCC------------------------------CCC
Confidence 99999999999999984 32 488999999999777654421 124
Q ss_pred ccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEE
Q psy14338 463 LQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGF 542 (1761)
Q Consensus 463 ~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~ 542 (1761)
..++|+|+++++++|+|++.. .++|.|++|||+|+|+++++||||+|++|++.|. .+|||||||+|+
T Consensus 359 ~~~vG~~~~~~~~~i~d~~~~-~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~------------~~g~~~TGDl~~ 425 (550)
T 3rix_A 359 PGAVGKVVPFFEAKVVDLDTG-KTLGVNQRGELCVRGPMIMSGYVNNPEATNALID------------KDGWLHSGDIAY 425 (550)
T ss_dssp TTEEEEECTTCEEEEECTTTC-CBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBC------------TTSCEEEEEEEE
T ss_pred CCCcccccCCcEEEEEeCCCC-cCCCCCCCeEEEEeCCCcchhhcCChhhhhhhcC------------CCCCeecCcEEE
Confidence 678999999999999996533 3699999999999999999999999999999983 479999999999
Q ss_pred EeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHH
Q psy14338 543 LGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQ 619 (1761)
Q Consensus 543 ~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~ 619 (1761)
+++||+|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++ ..++.++++++..++ .+.+++++
T Consensus 426 ~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V-----~~a~vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~ 500 (550)
T 3rix_A 426 WDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNI-----FDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVD 500 (550)
T ss_dssp ECTTCCEEEC----------------------------------------------------------------------
T ss_pred EeCCceEEEEecchheeEECCEEECHHHHHHHHHhCCCc-----ceEEEEEeecCCCCceEEEEEEecCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999888 7999999985 467888899887654 56789999
Q ss_pred HHHHHHHHhhhcc-eeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 620 WMSRVLQAVDSIH-QVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 620 ~l~~~Lp~y~~P~-~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+++++|+.|+.|. .+ +.+++||+|+||||||++|++.+.+
T Consensus 501 ~~~~~l~~~~~~~~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 541 (550)
T 3rix_A 501 YVASQVTTAKKLRGGV-------VFVDEVPKGLTGKLDARKIREILIK 541 (550)
T ss_dssp ------------------------------------------------
T ss_pred HHHHhcccccccCCce-------EEEeecCCCCCcceeHHHHHHHHHh
Confidence 9999999986554 44 5569999999999999999998764
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-72 Score=798.87 Aligned_cols=499 Identities=16% Similarity=0.178 Sum_probs=416.3
Q ss_pred ccCCCCcccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcC
Q psy14338 1153 VTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFP 1232 (1761)
Q Consensus 1153 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~ 1232 (1761)
+|.+..+....++++.|.+++. ++||++||+ ++++++||+||+++++++|++|++. |+++|++|+|+++
T Consensus 454 ~~~~~~~~~~~~l~~~~~~~~~-----~~p~~~Av~-----~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~g~~V~i~~~ 522 (1304)
T 2vsq_A 454 LNPPAQAHETKPLTYWFKEAVN-----ANPDAPALT-----YSGQTLSYRELDEEANRIARRLQKH-GAGKGSVVALYTK 522 (1304)
T ss_dssp TSCCCCCCCCCCHHHHHHHHHH-----HCTTSEEEE-----SSSCEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEECCC
T ss_pred cCCCCCCCCCCCHHHHHHHHHH-----hCCCCeEEE-----ECCeeEcHHHHHHHHHHHHHHHHhc-CcCCcCEEEEEeC
Confidence 4666555556789999988876 779999999 7889999999999999999999999 9999999999999
Q ss_pred CCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-cccccccCCccccC
Q psy14338 1233 PGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-NVVDIKSWPTILDT 1311 (1761)
Q Consensus 1233 ~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 1311 (1761)
||+++++++|||+|+|++||||||.+|.+ |+.+++++++++++|++......+...... ..+........
T Consensus 523 ~s~~~vv~~lailkaG~~~vpldp~~p~~------rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 593 (1304)
T 2vsq_A 523 RSLELVIGILGVLKAGAAYLPVDPKLPED------RISYMLADSAAACLLTHQEMKEQAAELPYTGTTLFIDDQTRF--- 593 (1304)
T ss_dssp SSHHHHHHHHHHHHTTCEEEECCTTSCHH------HHHHHHHHHTCCEEEECSTTCTTSTTCCCCSEEEESSCGGGG---
T ss_pred CCHHHHHHHHHHHHHCCEEEEECCCCHHH------HHHHHHHHcCCCEEEECcchhhhhhccCCCCcEEEecccccc---
Confidence 99999999999999999999999999998 999999999999999987654332211100 00000000000
Q ss_pred CCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1312 DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1312 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
............|+++|||+|||||||+||||+++|+++++. .+....++++++|+++.+.++.|+.+. +++|.
T Consensus 594 ----~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~ 667 (1304)
T 2vsq_A 594 ----EEQASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFSDQDTFLSVSNYAFDAFT-FDFYA 667 (1304)
T ss_dssp ----GSCSSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCCTTCEEEECSCTTSTHHH-HHHHH
T ss_pred ----ccccCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCCCCCEEEEECCccHHHHH-HHHHH
Confidence 000111223457899999999999999999999999999976 455567788899999888888877765 78999
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+|++|+++++.++.. .+++..+.+.|++++||+++++|++++.+.+. ....+++||.+++|||++++ .
T Consensus 668 ~l~~G~~l~~~~~~~-~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~----------~~~~~~~lr~~~~gGe~l~~-~ 735 (1304)
T 2vsq_A 668 SMLNAARLIIADEHT-LLDTERLTDLILQENVNVMFATTALFNLLTDA----------GEDWMKGLRCILFGGERASV-P 735 (1304)
T ss_dssp HHTTTCEEEECCGGG-TTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHH----------CSHHHHTCSEEEEESSCCCH-H
T ss_pred HHHcCCEEEECChhh-cCCHHHHHHHHHHcCCcEEEccHHHHHHHHhh----------chhcCCCccEEEEecCCCCH-H
Confidence 999999999998643 57999999999999999999999999999752 12235789999999999999 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.++|.+.++. ..++|.||+||++++++...... .+.....++||+|++|++
T Consensus 736 ~~~~~~~~~~~-----~~l~n~YG~TE~~~~~~~~~~~~-----------------------~~~~~~~~~iG~p~~~~~ 787 (1304)
T 2vsq_A 736 HVRKALRIMGP-----GKLINCYGPTEGTVFATAHVVHD-----------------------LPDSISSLPIGKPISNAS 787 (1304)
T ss_dssp HHHHHHHHHCT-----TCEEEEECCGGGSSCSEEEECCC-----------------------CCSSCSSCCCBEECTTEE
T ss_pred HHHHHHHhCCC-----CEEEEeEChhHHhHHheeeeccC-----------------------ccccCCCCCCceeeCCCE
Confidence 77888777642 57999999999876543211100 011122357999999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPV 1631 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~ 1631 (1761)
++|+|++ +++||.|++|||||+|+++++|||| +|++|+++|+++||. +++|||||||+||| ++|
T Consensus 788 ~~i~d~~-~~~~p~G~~GEl~i~G~~v~~GY~~---~p~~T~~~f~~~p~~--~g~~~yrTGDl~~~------~~d---- 851 (1304)
T 2vsq_A 788 VYILNEQ-SQLQPFGAVGELCISGMGVSKGYVN---RADLTKEKFIENPFK--PGETLYRTGDLARW------LPD---- 851 (1304)
T ss_dssp EEEECTT-SCBCCTTCCEEEEEEETTCCCCBTT---CHHHHHHHEEECTTS--TTCEEEEEEEEEEE------CTT----
T ss_pred EEEECCC-cCCCCCCCceEEEEeccccCccccC---CcccchhhhccCCCC--CCCeeEecCCeEEE------cCC----
Confidence 9999965 8999999999999999999999999 999999999999984 47899999999999 999
Q ss_pred CCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCCchhHhhHHHH
Q psy14338 1632 PPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPL 1706 (1761)
Q Consensus 1632 ~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~~~~~~~l~~~ 1706 (1761)
|+ |+|+||+|||||+||+||+|+|||+ +|.+||+|.+|+|++.. +.++|||+... ..+.++++++
T Consensus 852 ----G~----l~~~GR~d~qvki~G~rie~~eIE~-~l~~~p~V~~a~V~~~~~~~~~~~l~a~vv~~~-~~~~~~l~~~ 921 (1304)
T 2vsq_A 852 ----GT----IEYAGRIDDQVKIRGHRIELEEIEK-QLQEYPGVKDAVVVADRHESGDASINAYLVNRT-QLSAEDVKAH 921 (1304)
T ss_dssp ----SC----EEEEEEGGGEEEETTEEEEHHHHHH-HHHHSSSCCEEEEEEECCSSSCCEEEEEEECSS-SSCHHHHHHH
T ss_pred ----Ce----EEEEcCCCCEEEECCEeeCHHHHHH-HHHhCCCCceEEEEEEecCCCCEEEEEEEeCCC-CCCHHHHHHH
Confidence 99 9999999999999999999999999 89999999999999743 47889988653 5567899999
Q ss_pred HHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHH
Q psy14338 1707 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1707 l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~ 1747 (1761)
|+++ || .||+|+.|++++ +||+|+||||||++|++..
T Consensus 922 l~~~-Lp-~ymvP~~~~~l~--~lP~t~~GKidR~~L~~~~ 958 (1304)
T 2vsq_A 922 LKKQ-LP-AYMVPQTFTFLD--ELPLTTNGKVNKRLLPKPD 958 (1304)
T ss_dssp HHHH-SC-GGGSCSEEEEES--CCCCCSSCSSCCSCCCCCC
T ss_pred HHHh-Ch-HhhhccEEEEec--ccCCCCCcccCHhhcCCcc
Confidence 9997 98 999999999999 9999999999999998754
|
| >4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-71 Score=713.88 Aligned_cols=479 Identities=18% Similarity=0.219 Sum_probs=398.4
Q ss_pred CCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1179 AGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
+++|+++|+...+ ++++++||+||+++++++|++|+++ |+++||+|+|+++|++++++++|||+++|+++|||||.+
T Consensus 11 ~~~p~~~a~~~~~--~~~~~~Ty~eL~~~~~~lA~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~~~ 87 (503)
T 4fuq_A 11 DKLDDPHKLAIET--AAGDKISYAELVARAGRVANVLVAR-GLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPLNTAY 87 (503)
T ss_dssp SCCSCTTSEEEEE--TTCCEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred HhCCCCceEEEec--CCCcEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEecCCCC
Confidence 4779999988543 3467899999999999999999999 999999999999999999999999999999999999988
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCc----cchhhhccCCCCCCCEEEE
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMP----KKKLAALYRAPTAEMLAYL 1334 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~i 1334 (1761)
|.+ ++.+++++++++++|++......+.............+... ...... ............++++|||
T Consensus 88 ~~~------~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~a~i 160 (503)
T 4fuq_A 88 TLH------ELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPD-GRGSLTDAAAGASEAFATIDRGADDLAAI 160 (503)
T ss_dssp CHH------HHHHHHHHHCCSEEEECGGGTTTTHHHHHHHTCEEEECCTT-SCSHHHHHHHTSCSCCCCCCCCTTSEEEE
T ss_pred CHH------HHHHHHHhcCCcEEEECchhhHHHHHHHhhcCceEEEecCC-cccccchhhhcCCCCcCcCCCCCCCeEEE
Confidence 887 99999999999999999765432222111000000000000 000000 0000111234578999999
Q ss_pred EeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCccccCHHHH
Q psy14338 1335 DFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALW 1414 (1761)
Q Consensus 1335 i~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l 1414 (1761)
+|||||||+||||+++|+++.+.+.+....+++.++|+++..+|++|.+++...++.+++.|+++++.+. +++..+
T Consensus 161 ~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~ 236 (503)
T 4fuq_A 161 LYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPK----FDPDKI 236 (503)
T ss_dssp EECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECSS----CCHHHH
T ss_pred EECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcCC----CCHHHH
Confidence 9999999999999999999999999999999999999999999999988876667889999999999884 799999
Q ss_pred HHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCCccccccc
Q psy14338 1415 LSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSF 1494 (1761)
Q Consensus 1415 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~y 1494 (1761)
++.++ ++|+++++|+++..+++.. .....++++||.+++|||++++ .+.++|.+.++ ..++|.|
T Consensus 237 ~~~i~--~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~lr~~~~gg~~l~~-~~~~~~~~~~~------~~~~~~Y 300 (503)
T 4fuq_A 237 LDLMA--RATVLMGVPTFYTRLLQSP-------RLTKETTGHMRLFISGSAPLLA-DTHREWSAKTG------HAVLERY 300 (503)
T ss_dssp HHHHT--TCCEEEECHHHHHHHHTCT-------TCSTTTTTTCCEEEECSSCCCH-HHHHHHHHHHS------CCEEECC
T ss_pred HHHHh--hcCEEEEHHHHHHHHHhCC-------CccccchhhcEEEEECCCCCCH-HHHHHHHHHhC------CCccceE
Confidence 99998 8999999999999997632 2345568899999999999999 88888888764 5799999
Q ss_pred cccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCcceEEEEc
Q psy14338 1495 GCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQ 1574 (1761)
Q Consensus 1495 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~ 1574 (1761)
|+||++..+..... .....+++|+|++|++++|+|+++++++|.|++|||+|+
T Consensus 301 G~TE~~~~~~~~~~---------------------------~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~GEl~v~ 353 (503)
T 4fuq_A 301 GMTETNMNTSNPYD---------------------------GDRVPGAVGPALPGVSARVTDPETGKELPRGDIGMIEVK 353 (503)
T ss_dssp EETTTEECBCCCSS---------------------------SCCCTTEEEEBCTTCEEEEECTTTCCBCCTTCCEEEEEE
T ss_pred cccccCcccccCCC---------------------------CCCcCCccccCCCCeEEEEEECCCCCCCcCCCceEEEEE
Confidence 99998765432110 011234699999999999999888999999999999999
Q ss_pred CCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEe
Q psy14338 1575 SPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIML 1654 (1761)
Q Consensus 1575 g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki 1654 (1761)
|+++++|||| +|+.|+++| ..+|||||||+|++ |+| |+ |+|+||+|||||+
T Consensus 354 g~~v~~GY~~---~~~~t~~~f--------~~~g~~~TGDl~~~------~~d--------G~----l~~~GR~dd~ik~ 404 (503)
T 4fuq_A 354 GPNVFKGYWR---MPEKTKSEF--------RDDGFFITGDLGKI------DER--------GY----VHILGRGKDLVIT 404 (503)
T ss_dssp STTSCCCBTT---CHHHHHHTB--------CTTSCEEEEEEEEE------CTT--------CE----EEECCSSTTCEEE
T ss_pred CCchhhhhcC---ChhhhHhhh--------CCCCCeEcceeEEE------cCC--------Cc----EEEEecCCCEEEE
Confidence 9999999999 999999999 35789999999999 999 99 9999999999999
Q ss_pred CCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCC
Q psy14338 1655 RGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPG 1728 (1761)
Q Consensus 1655 ~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~ 1728 (1761)
+|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+.. +...+.++++++|+++ || .||+|+.|++++
T Consensus 405 ~G~~v~p~eIE~-~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~l~~~l~~~-L~-~~~~P~~i~~v~-- 479 (503)
T 4fuq_A 405 GGFNVYPKEIES-EIDAMPGVVESAVIGVPHADFGEGVTAVVVRDKGATIDEAQVLHGLDGQ-LA-KFKMPKKVIFVD-- 479 (503)
T ss_dssp TTEEECHHHHHH-HHHTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHBTT-BC-GGGCCSEEEEES--
T ss_pred CCEEECHHHHHH-HHHhCCCeeEEEEEEeEchhcCceeEEEEEeCCCCCCCHHHHHHHHHhh-cc-cCCCCCEEEEEC--
Confidence 999999999999 8999999999999974 34688888874 4556778999999987 98 999999999999
Q ss_pred CccCCCchhhhHHHHHHHHH
Q psy14338 1729 VVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1729 ~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
+||+|+|||+||++|++.+.
T Consensus 480 ~lP~t~~GKi~R~~L~~~~~ 499 (503)
T 4fuq_A 480 DLPRNTMGKVQKNVLRETYK 499 (503)
T ss_dssp CCCBCTTSCBCHHHHHHHTT
T ss_pred CCCCCcccceeHHHHHHHHH
Confidence 99999999999999999874
|
| >2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-72 Score=723.62 Aligned_cols=490 Identities=17% Similarity=0.201 Sum_probs=396.4
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.++.++|+++++ +|+++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ +++
T Consensus 24 ~~~~~~l~~~~~-~p~~~A~~~~~------~~~Ty~el~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~n~--~~~ 86 (529)
T 2v7b_A 24 NFAAYLFRLNET-RAGKTAYIDDT------GSTTYGELEERARRFASALR--------TLGVHPEERILLVMLDT--VAL 86 (529)
T ss_dssp CHHHHHHHHTGG-GTTSEEEECSS------CEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--THH
T ss_pred eHHHHHHHhhhc-cCCceEEEeCC------CCccHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEEcCCc--HHH
Confidence 468999999999 99999998654 58999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc------ccceeccCCCccee--
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA------GEVVAFKGWPKLTW-- 232 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-- 232 (1761)
++++|||+++|+++||+||.++.+ |+.+++++++++++|+++.....+..... ..++..+......+
T Consensus 87 ~~~~lA~~~~G~~~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (529)
T 2v7b_A 87 PVAFLGALYAGVVPVVANTLLTPA-----DYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESEPRLA 161 (529)
T ss_dssp HHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC------CC
T ss_pred HHHHHHHHHcCceEEecCcccCHH-----HHHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccccccccc
Confidence 999999999999999999999976 89999999999999998875433322110 11111111000000
Q ss_pred -EEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHH-HHHHHHHHHHcCCCCCCeEEEccCCcchhhh
Q psy14338 233 -FVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAM-LSHCRALTQACHYTEGENMVCVLDFKRETGL 310 (1761)
Q Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l-~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 310 (1761)
...+...... .........++|+|||+|||||||+||||+++|+++ .+........+++.++|++++++|++|++++
T Consensus 162 ~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~ 240 (529)
T 2v7b_A 162 PLFEELIDAAA-PAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAYGL 240 (529)
T ss_dssp CBHHHHHHTSC-CCSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTTSHHHH
T ss_pred cchhhhhccCC-CcccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHHHHHHH
Confidence 0011111111 111223457899999999999999999999999999 6665555556788999999999999999998
Q ss_pred HHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCH
Q psy14338 311 WHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSL 390 (1761)
Q Consensus 311 ~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~ 390 (1761)
...++.+|..|+++++.++ .+++..+++.|+++++|+++++| +++..++...........+||.+++| |+++++
T Consensus 241 ~~~~~~~l~~G~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~lr~~~~g--Ge~l~~ 314 (529)
T 2v7b_A 241 GNGLTFPLSVGATAILMAE---RPTADAIFARLVEHRPTVFYGVP-TLYANMLVSPNLPARADVAIRICTSA--GEALPR 314 (529)
T ss_dssp HHHTHHHHHHTCEEECCCS---CCCHHHHHHHHHHSCCSEEEECH-HHHHHHHTCTTCCCGGGCCCCEEEEC--SSCCCH
T ss_pred HHHHHHHHhcCcEEEEecC---CCCHHHHHHHHHHhCCEEEEecH-HHHHHHHhCcccccccCCceEEEEEc--CCCCCH
Confidence 7657889999999999853 67999999999999999999996 47777776554333212489999999 999999
Q ss_pred HHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCC
Q psy14338 391 SSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVM 470 (1761)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 470 (1761)
++.++|.+.+ |++ ++|.||+||++.+++..... .....++|+|+
T Consensus 315 ~~~~~~~~~~---g~~---i~~~YG~TE~~~~~~~~~~~------------------------------~~~~~~~G~p~ 358 (529)
T 2v7b_A 315 EIGERFTAHF---GCE---ILDGIGSTEMLHIFLSNRAG------------------------------AVEYGTTGRPV 358 (529)
T ss_dssp HHHHHHHHHH---SCC---EEEEEECTTTSSEEEECCTT------------------------------CCCTTSCCEEC
T ss_pred HHHHHHHHHh---CCc---eeeeEchhhcCceeeccccC------------------------------CCccCCcccCC
Confidence 9999999988 554 99999999996554433211 12356899999
Q ss_pred CCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEE
Q psy14338 471 PGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVF 550 (1761)
Q Consensus 471 ~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~ 550 (1761)
+|++++|+|++++ ++|.|++|||+|+|+++++||||+|+.|+++|. ++||||||+|++++||+|+
T Consensus 359 ~~~~~~i~d~~g~--~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~-------------~~~~~TGDl~~~~~~G~l~ 423 (529)
T 2v7b_A 359 PGYEIELRDEAGH--AVPDGEVGDLYIKGPSAAVMYWNNREKSRATFL-------------GEWIRSGDKYCRLPNGCYV 423 (529)
T ss_dssp TTCEEEEECTTSC--BCCTTSCEEEEEECTTCCCCBTTCHHHHHHHEE-------------TTEEEEEEEEEECTTSCEE
T ss_pred CCCEEEEECCCCC--CCCCCCccEEEEecCCcccccCCChHHHHHhhh-------------cCCcccCceEEECCCccEE
Confidence 9999999999887 599999999999999999999999999999996 7899999999999999999
Q ss_pred EEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecCCCceEEEEEEeCCCC-----CHHHHHHHHHHHH
Q psy14338 551 VCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVLRDERICVIAEQRPDC-----SEEESFQWMSRVL 625 (1761)
Q Consensus 551 ~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~~~~~l~a~v~~~~~~-----~~~~l~~~l~~~L 625 (1761)
|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.....++.++|+++...+. ..++++++|+++|
T Consensus 424 ~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V-----~~~~vv~~~~~~~~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~L 498 (529)
T 2v7b_A 424 YAGRSDDMLKVSGQYVSPVEVEMVLVQHDAV-----LEAAVVGVDHGGLVKTRAFVVLKREFAPSEILAEELKAFVKDRL 498 (529)
T ss_dssp EEEEGGGCBC----CBCHHHHHHHHTTSTTE-----EEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHTTS
T ss_pred EeCccCCeEEECCEEECHHHHHHHHHhCCCc-----ceEEEEEecCCCceEEEEEEEecCCCCcchhHHHHHHHHHHhhc
Confidence 9999999999999999999999999998888 79999998555678899999987653 2467999999999
Q ss_pred HHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 626 QAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 626 p~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
|.||+|..+ +.+++||+|+|||+||++|++
T Consensus 499 ~~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~ 528 (529)
T 2v7b_A 499 APHKYPRDI-------VFVDDLPKTATGKIQRFKLRE 528 (529)
T ss_dssp CTTTSCSEE-------EEESCCCBCTTSCBCHHHHHC
T ss_pred chhhCCeEE-------EEeccCCCCCccchhHHhHhh
Confidence 999999986 445999999999999999985
|
| >1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-71 Score=721.60 Aligned_cols=494 Identities=16% Similarity=0.196 Sum_probs=410.2
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+++. ++||++|++ ++++++||+||+++++++|++|++. |+++||+|+|+++|++++++++|
T Consensus 25 ~tl~~~l~~~a~-----~~p~~~A~~-----~~~~~~Ty~eL~~~~~~lA~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~l 93 (539)
T 1mdb_A 25 ETFGDLLRDRAA-----KYGDRIAIT-----CGNTHWSYRELDTRADRLAAGFQKL-GIQQKDRVVVQLPNIKEFFEVIF 93 (539)
T ss_dssp CCHHHHHHHHHH-----HHTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEECCCSSHHHHHHHH
T ss_pred CCHHHHHHHHHH-----HCCCCEEEE-----eCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHH
Confidence 467777777765 679999999 6678999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhH--------HHHHhh-hcccc-ccccc---cCCccc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV--------IKLLKS-KEASN-VVDIK---SWPTIL 1309 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~--------~~~~~~-~~~~~-~~~~~---~~~~~~ 1309 (1761)
||+++|+++||++|.+|.+ ++.+++++++++++|++... ...+.. ..... ++... .+..+.
T Consensus 94 A~~~~Ga~~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (539)
T 1mdb_A 94 ALFRLGALPVFALPSHRSS------EITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPLE 167 (539)
T ss_dssp HHHHHTCEEEECCTTCCHH------HHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCTTSEEGG
T ss_pred HHHHcCeEEecCCCCCCHH------HHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCccchhhhh
Confidence 9999999999999988877 99999999999999998642 111111 11000 00000 011111
Q ss_pred cCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHH-H
Q psy14338 1310 DTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFAL-W 1388 (1761)
Q Consensus 1310 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~ 1388 (1761)
.... .........++++|||+|||||||+||||+++|+++.+.+.+....+++.++|+++..+|++|.+++.. .
T Consensus 168 ~~~~-----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~ 242 (539)
T 1mdb_A 168 DLHT-----EPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPG 242 (539)
T ss_dssp GCCC-----CCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSH
T ss_pred hccc-----cccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhhHHH
Confidence 0000 001123457899999999999999999999999999999999999999999999999999999988865 6
Q ss_pred HHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCC
Q psy14338 1389 VLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP 1468 (1761)
Q Consensus 1389 ~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~ 1468 (1761)
++.+|+.|+++++.+. +++..+++.|+++++|+++++|+++..+++.. .....++++||.+++|||+++
T Consensus 243 ~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~l~~lr~~~~gG~~l~ 311 (539)
T 1mdb_A 243 VLGVLYAGGRVVLSPS----PSPDDAFPLIEREKVTITALVPPLAMVWMDAA-------SSRRDDLSSLQVLQVGGAKFS 311 (539)
T ss_dssp HHHHHHTTCEEEECSS----SSHHHHHHHHHHHTCSEEEECHHHHHHHHHHH-------HHCCCCCTTCCEEEEESSCCC
T ss_pred HHHHHHhCCEEEECCC----CCHHHHHHHHHHcCCeEEEccHHHHHHHHhCc-------cccCCCccceeEEEEcCCCCC
Confidence 8999999999999874 79999999999999999999999999997642 234567899999999999999
Q ss_pred hHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccC
Q psy14338 1469 RIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLP 1548 (1761)
Q Consensus 1469 ~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 1548 (1761)
+ .+.++|.+.++ +.+++.||+||++..+.. ... +......++|+|++
T Consensus 312 ~-~~~~~~~~~~~------~~~~~~YG~TE~~~~~~~-~~~-------------------------~~~~~~~~~G~p~~ 358 (539)
T 1mdb_A 312 A-EAARRVKAVFG------CTLQQVFGMAEGLVNYTR-LDD-------------------------PEEIIVNTQGKPMS 358 (539)
T ss_dssp H-HHHTTHHHHTC------SEEEEEEECTTSCEEECC-TTS-------------------------CHHHHHHCCCEESS
T ss_pred H-HHHHHHHHHhC------CcEEEEEcCCCCcccccC-CCC-------------------------cHHhcCCCCCcccC
Confidence 9 78888877663 579999999996533221 100 00112356999997
Q ss_pred C-cEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCC
Q psy14338 1549 G-VKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVA 1627 (1761)
Q Consensus 1549 ~-~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d 1627 (1761)
+ .+++|+|++ ++++|.|++|||+|+|+++++|||| +|++|+++|. .+|||||||+|++ |+|
T Consensus 359 ~~~~~~i~d~~-~~~~~~g~~GEl~v~g~~v~~GY~~---~~~~t~~~f~--------~~g~~~TGDlg~~------~~d 420 (539)
T 1mdb_A 359 PYDESRVWDDH-DRDVKPGETGHLLTRGPYTIRGYYK---AEEHNAASFT--------EDGFYRTGDIVRL------TRD 420 (539)
T ss_dssp TTCEEEEECTT-SCBCCTTCCEEEEEECTTSCSSCTT---CHHHHHHHBC--------TTSCEEEEEEEEE------CTT
T ss_pred CCceEEEECCC-CCCCcCCCcceEEeeCcccchhhcC---Chhhhhhhcc--------CCCCeecCceEEE------CCC
Confidence 6 589999965 8999999999999999999999999 9999999993 5789999999999 999
Q ss_pred CCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhh
Q psy14338 1628 GAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALD 1702 (1761)
Q Consensus 1628 ~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~ 1702 (1761)
|+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+..+...+.++
T Consensus 421 --------G~----l~~~GR~dd~ik~~G~~v~p~eIE~-~l~~~p~V~~a~vv~~~~~~~g~~~~a~vv~~~~~~~~~~ 487 (539)
T 1mdb_A 421 --------GY----IVVEGRAKDQINRGGEKVAAEEVEN-HLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAE 487 (539)
T ss_dssp --------SC----EEEEEEGGGCEECSSCEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEESSSCCCHHH
T ss_pred --------Cc----EEEeccccceEEECCEEECHHHHHH-HHHhCCCcceEEEEeccccccCceEEEEEEECCCCCCHHH
Confidence 99 9999999999999999999999999 8999999999999974 3578899888766667889
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCCChhhh
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPIYV 1757 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~~~~~ 1757 (1761)
++++|+++.|| .||+|+.|++++ +||+|+|||+||++|++.+ ..+++++|.
T Consensus 488 l~~~l~~~~L~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~-~~~i~~~y~ 538 (539)
T 1mdb_A 488 LKAFLRERGLA-AYKIPDRVEFVE--SFPQTGVGKVSKKALREAI-SEKLLAGFK 538 (539)
T ss_dssp HHHHHHHTTCC-GGGSCSEEEECS--SCCBCTTSCBCHHHHHHHH-HHHHHTC--
T ss_pred HHHHHHhCCCC-cccCCCEEEEec--cCCCCCCcCEeHHHHHHHH-HHHHhcccc
Confidence 99999984488 999999999999 9999999999999999988 455666664
|
| >3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-72 Score=716.34 Aligned_cols=471 Identities=19% Similarity=0.234 Sum_probs=380.4
Q ss_pred hhHHHHHHHHhhhcCC-CcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 81 RNLEAAIQRYGSATYK-APVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd-~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
.++.++|.++++++|+ ++|+++.+ +++||+||+++++++|+.|+ . |++|+|+++|+ ++
T Consensus 22 ~tl~~~l~~~a~~~p~d~~Al~~~~------~~~Ty~eL~~~~~~~A~~L~--------~-----~~~V~i~~~~~--~~ 80 (505)
T 3nyq_A 22 SSLFPALSPAPTGAPADRPALRFGE------RSLTYAELAAAAGATAGRIG--------G-----AGRVAVWATPA--ME 80 (505)
T ss_dssp --CCTTTSSCCCSGGGGSEEEEETT------EEEEHHHHHHHHHHHHTTCC----------------CEEEECCSS--HH
T ss_pred chhHHHHHHHHHhCCCCCeEEEECC------eeeeHHHHHHHHHHHHhhcc--------C-----CCEEEEEcCCC--HH
Confidence 5678888889999987 99999865 79999999999999999887 2 78999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
+++++|||+|+|+++|||||.+|.+ |+.+++++++++++|++..... ..... .......+.
T Consensus 81 ~~~~~la~~~~Ga~~vpl~~~~~~~-----~l~~il~~~~~~~vi~~~~~~~--~~~~~----------~~~~~~~~~-- 141 (505)
T 3nyq_A 81 TGVAVVAALLAGVAAVPLNPKSGDK-----ELAHILSDSAPSLVLAPPDAEL--PPALG----------ALERVDVDV-- 141 (505)
T ss_dssp HHHHHHHHHHHTCCEEEECTTCCHH-----HHHHHHHHHCCSEEEECTTCCC--CGGGT----------TSEEEECCT--
T ss_pred HHHHHHHHHHhCCEEEEcCCCCCHH-----HHHHHHHHCCCCEEEECCcccc--chhhc----------ccccccccc--
Confidence 9999999999999999999999976 9999999999999999865211 10000 000000110
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHh
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVL 319 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~ 319 (1761)
......+.....++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|..++...++.+|+
T Consensus 142 -~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~ 220 (505)
T 3nyq_A 142 -RARGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLR 220 (505)
T ss_dssp -TCCCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHH
T ss_pred -ccccCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHh
Confidence 0111122344678999999999999999999999999999999999999999999999999999999887655899999
Q ss_pred cCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC---CCCCCCCceeEEEecCCCccCCHHHHHHH
Q psy14338 320 NGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD---HKDISLSSLRLLLVGDGANPWSLSSCDQF 396 (1761)
Q Consensus 320 ~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~---~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~ 396 (1761)
.|+++++.+ .+++..+++.+ ++++|+++++| +++..++.... .....++++|.+++| |+++++++.++|
T Consensus 221 ~G~~~~~~~----~~~~~~~~~~i-~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~l~~lr~i~~g--g~~l~~~~~~~~ 292 (505)
T 3nyq_A 221 RGGSVRHLG----RFSTEGAAREL-NDGATMLFGVP-TMYHRIAETLPADPELAKALAGARLLVSG--SAALPVHDHERI 292 (505)
T ss_dssp HTCEEEECS----SCCHHHHHHHH-TTTCCEEEECH-HHHHHHHHHGGGCHHHHHHHHHCSEEEEC--SSCCCHHHHHHH
T ss_pred cCCEEEECC----CCChHHHHHHH-hhCCeEEEehH-HHHHHHHHhhhcCchhhcccccceEEEEC--CCCCCHHHHHHH
Confidence 999999998 78999999999 88999999996 47777665211 112346789999999 999999999999
Q ss_pred HHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEE
Q psy14338 397 LSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMT 476 (1761)
Q Consensus 397 ~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 476 (1761)
.+.+ |.+ ++|.||+||++++++..... .....++|+|++|++++
T Consensus 293 ~~~~---~~~---~~~~YG~TE~~~~~~~~~~~------------------------------~~~~~~vG~p~~~~~~~ 336 (505)
T 3nyq_A 293 AAAT---GRR---VIERYGMTETLMNTSVRADG------------------------------EPRAGTVGVPLPGVELR 336 (505)
T ss_dssp HHHH---SCC---CEEEEEETTTEEEEECCTTS------------------------------CCCTTCCCEECTTCEEE
T ss_pred HHhc---CCe---eecccchhhcccccccCCCC------------------------------CCCCCCcccCCCCCEEE
Confidence 9987 543 99999999998766543311 12356899999999999
Q ss_pred EEeCCCCcccCCC---CCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 477 VVKMDSPSYLCKT---DEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 477 I~d~~~~~~~~p~---G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
|+|+++++ +|. |++|||+|+|+++++||||+|++|+++|. .++||||||+|++++||.|+|+|
T Consensus 337 i~d~~g~~--~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~------------~~g~y~TGDl~~~~~dG~l~~~G 402 (505)
T 3nyq_A 337 LVEEDGTP--IAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFT------------EDGFFRTGDMAVRDPDGYVRIVG 402 (505)
T ss_dssp EC-----C--CCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBC------------TTSCEEEEEEEEECTTSCEEEEE
T ss_pred EECCCCCC--cccCCCCceEEEEEecCchhhhhCCChhHhhhhhc------------CCCCCccCCeEEECCCccEEEeC
Confidence 99999874 555 89999999999999999999999999995 37899999999999999999999
Q ss_pred cc-CCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCC---CCCHHHHHHHHHHHHHHh
Q psy14338 554 SR-DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRP---DCSEEESFQWMSRVLQAV 628 (1761)
Q Consensus 554 R~-d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~---~~~~~~l~~~l~~~Lp~y 628 (1761)
|+ |+|||++|+||+|.|||++|.+++.| .+|+|++.++ ..++.++|++++.+ ..+.++++++|+++||.|
T Consensus 403 R~~d~~ik~~G~~v~~~eIE~~l~~~p~V-----~~a~Vv~~~~~~~g~~l~a~vv~~~~~~~~~~~~l~~~l~~~L~~~ 477 (505)
T 3nyq_A 403 RKATDLIKSGGYKIGAGEIENALLEHPEV-----REAAVTGEPDPDLGERIVAWIVPADPAAPPALGTLADHVAARLAPH 477 (505)
T ss_dssp ESSCCCEEETTEEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEESSTTSCCCHHHHHHHHHHHTCGG
T ss_pred CccCceEEeCCEEECHHHHHHHHHHCcCc-----cEEEEEeeECCCCCcEEEEEEEECCCCCCCCHHHHHHHHHhhCCCC
Confidence 98 69999999999999999999999888 7999999985 46789999999875 356789999999999999
Q ss_pred hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHH
Q psy14338 629 DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 629 ~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
|+|+.+ +.+++||+|+||||||++|++
T Consensus 478 ~~P~~i-------~~v~~lP~t~~GKi~r~~L~~ 504 (505)
T 3nyq_A 478 KRPRVV-------RYLDAVPRNDMGKIMKRALNR 504 (505)
T ss_dssp GSCSEE-------EECSCCCC-------------
T ss_pred cCccEE-------EEECCCCCCCCcCeeHHhhcc
Confidence 999986 556999999999999999986
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-71 Score=770.61 Aligned_cols=507 Identities=17% Similarity=0.254 Sum_probs=336.5
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..+++++|+++++++||++|+++.+. | +++||+||+++++++|+.|+ +.|+++||+|+|+++|| ++
T Consensus 60 ~~tl~~~l~~~a~~~pd~~Al~~~~~-~---~~~TY~eL~~~~~~lA~~L~--------~~Gv~~gd~V~i~~~ns--~e 125 (979)
T 3tsy_A 60 HLSLHDYIFQNISEFATKPCLINGPT-G---HVYTYSDVHVISRQIAANFH--------KLGVNQNDVVMLLLPNC--PE 125 (979)
T ss_dssp TSCHHHHHTTTGGGTTTSEEEEETTT-C---CEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECSSC--HH
T ss_pred CCCHHHHHHHHHHhCCCCeEEEECCC-C---cEEEHHHHHHHHHHHHHHHH--------HcCCCCcCEEEEEeCCC--HH
Confidence 36899999999999999999997532 2 58999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc---cceeccCCCc----cee
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG---EVVAFKGWPK----LTW 232 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~ 232 (1761)
+++++|||+|+|+++||+||.+|.+ |+.+++++++++++|+++...+.+...... .++..+.... ...
T Consensus 126 ~~v~~lA~~~~Ga~~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (979)
T 3tsy_A 126 FVLSFLAASFRGATATAANPFFTPA-----EIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGC 200 (979)
T ss_dssp HHHHHHHHHHHTCEEEEECTTSCHH-----HHHHHHHHHTEEEEEECSTTTTTSHHHHHTSCCEEEECCCCTTSCCCTTE
T ss_pred HHHHHHHHHHcCCEEEeeCCCCCHH-----HHHHHHHHcCCeEEEEChHHHHHHHHHhhcCCceEEEeCCcccccCCccc
Confidence 9999999999999999999999976 999999999999999998776555432111 1111111100 000
Q ss_pred EEeccccCCCC---CCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH----HcCCCCCCeEEEccCCc
Q psy14338 233 FVTEHLAKTPK---DWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ----ACHYTEGENMVCVLDFK 305 (1761)
Q Consensus 233 ~~~~~~~~~~~---~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~ 305 (1761)
...+.+..... ...+.....++|+|||+|||||||+||||+++|+++++.+.+... .+++.++|++++++|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 280 (979)
T 3tsy_A 201 LRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMF 280 (979)
T ss_dssp EEGGGTSSCCSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSS
T ss_pred ccHHHHhhccccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchH
Confidence 01111111111 112234567899999999999999999999999999988876653 45688999999999999
Q ss_pred chhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCC
Q psy14338 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGA 385 (1761)
Q Consensus 306 ~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~G 385 (1761)
|++++...++.+|..|+++++.+ .+++..+++.|+++++|++.++| +++..++........++++||.+++| |
T Consensus 281 h~~~~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~l~~lr~~~~g--g 353 (979)
T 3tsy_A 281 HIYALNSIMLCGLRVGAAILIMP----KFEINLLLELIQRCKVTVAPMVP-PIVLAIAKSSETEKYDLSSIRVVKSG--A 353 (979)
T ss_dssp SHHHHHHTHHHHHHHTCEEEECS----SCCHHHHHHHHHHHTCCEEEECH-HHHHHHHHCGGGGTSCCTTCCEEEES--S
T ss_pred HHHHHHHHHHHHHhcCcEEEEeC----CCCHHHHHHHHHHhCCeEEEcHH-HHHHHHHhCccccCCCccceEEEEEc--C
Confidence 99999766899999999999998 68999999999999999999996 48888887766666788999999999 9
Q ss_pred ccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccc
Q psy14338 386 NPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQD 465 (1761)
Q Consensus 386 e~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (1761)
+++++++.++|.+.++. . .++|.||+||++.+++..... .........++
T Consensus 354 ~~l~~~~~~~~~~~~~~--~---~l~~~YG~TE~~~~~~~~~~~-------------------------~~~~~~~~~~~ 403 (979)
T 3tsy_A 354 APLGKELEDAVNAKFPN--A---KLGQGYGMTEAGPVLAMSLGF-------------------------AKEPFPVKSGA 403 (979)
T ss_dssp CCCCSSHHHHHHHHCTT--C---EEEECEECGGGCSEEEECGGG-------------------------SSSCCCCCTTC
T ss_pred CCCCHHHHHHHHHHCCC--C---eEEeeechhhhhHHHHhCCCC-------------------------CCCccccCCCC
Confidence 99999999999998853 2 599999999998766543210 00011234678
Q ss_pred cCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC
Q psy14338 466 CGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP 545 (1761)
Q Consensus 466 iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~ 545 (1761)
+|+|++|++++|+|++.. .++|.|++|||+|+|+++++||||+|++|+++|. .++||||||+|++++
T Consensus 404 ~G~p~~~~~~~i~d~~~~-~~~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~------------~~g~~~TGDl~~~~~ 470 (979)
T 3tsy_A 404 CGTVVRNAEMKIVDPDTG-DSLSRNQPGEICIRGHQIMKGYLNNPAATAETID------------KDGWLHTGDIGLIDD 470 (979)
T ss_dssp CCEECSSCEEEEECTTSC-CBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBC------------TTSCEEEEEEEEECT
T ss_pred cCcccCCcEEEEEeCCCC-CCCCCCCccEEEEECCCccccccCChhhhhhhcc------------CCCcEEcCCEEEEcC
Confidence 999999999999996533 2699999999999999999999999999999994 478999999999999
Q ss_pred CCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHHHHHH
Q psy14338 546 GGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESFQWMS 622 (1761)
Q Consensus 546 dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~~~l~ 622 (1761)
||+|+|+||+|||||++|+||+|+|||++|.+++.| .+++|++.++ ..++.++||++..++ .+.++++++|+
T Consensus 471 dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~p~V-----~~~~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~ 545 (979)
T 3tsy_A 471 DDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDI-----TDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVS 545 (979)
T ss_dssp TSCEEEEEESCC--------------------------------------------------------------------
T ss_pred CceEEEecCCCCEEEECCEEECHHHHHHHHHhCCCc-----ceEEEEEecccCCCcEEEEEEEECCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999888 7999999885 467889999987554 57789999999
Q ss_pred HHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHcC
Q psy14338 623 RVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 623 ~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~~ 667 (1761)
++||.||+|..+ +.+++||+|+||||||++|++.+.++
T Consensus 546 ~~l~~~~~p~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~~ 583 (979)
T 3tsy_A 546 KQVVFYKRINKV-------FFTESIPKAPSGKILRKDLRAKLANG 583 (979)
T ss_dssp ---------------------------------------------
T ss_pred HhcccccCCeEE-------EEeCCcCcCCCCCeeHHHHHHHHHhh
Confidence 999999999986 66799999999999999999987653
|
| >3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-70 Score=708.54 Aligned_cols=482 Identities=16% Similarity=0.147 Sum_probs=384.0
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
+|.++|+++|+++||++|+++.+ +++||+||+++++++|+.|+ +. +||+|+|+++|+ ++++
T Consensus 2 tl~~~l~~~a~~~pd~~Al~~~~------~~~Ty~eL~~~~~~lA~~L~--------~~---~gd~V~i~~~n~--~e~~ 62 (501)
T 3ipl_A 2 SLDFWLYKQAQQNGHHIAITDGQ------ESYTYQNLYCEASLLAKRLK--------AY---QQSRVGLYIDNS--IQSI 62 (501)
T ss_dssp -CCCHHHHHHHHHTTSEEEECSS------CEEEHHHHHHHHHHHHHHHH--------TT---CCSEEEEECCSS--HHHH
T ss_pred CHHHHHHHHHHhcCCceEEEeCC------cEEEHHHHHHHHHHHHHHHH--------Hc---CCCEEEEEcCCC--HHHH
Confidence 56788999999999999999755 58999999999999999999 54 899999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-cce---ec---cCC----Ccc
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-EVV---AF---KGW----PKL 230 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-~~~---~~---~~~----~~~ 230 (1761)
+++|||+++|+++||++|.++.+ ++.+++++++++++|++............. .+. .. ... ...
T Consensus 63 ~~~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (501)
T 3ipl_A 63 ILIHACWLANIEIAMINTRLTPN-----EMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGI 137 (501)
T ss_dssp HHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHTTCCEEEESSCCCCTTSEEEETTC--------------------
T ss_pred HHHHHHHHcCCEEEecCccCCHH-----HHHHHHHhcCCCEEEEccccccccccccccccceeeeeeccccccccccccc
Confidence 99999999999999999999976 899999999999999998765443221100 000 00 000 000
Q ss_pred eeE--EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchh
Q psy14338 231 TWF--VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRET 308 (1761)
Q Consensus 231 ~~~--~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 308 (1761)
.+. ...................++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++|++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 217 (501)
T 3ipl_A 138 QYDTSNETVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHIS 217 (501)
T ss_dssp ------------CCHHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHH
T ss_pred ccccchhhccccCCcccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHH
Confidence 000 000000000001122345789999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 309 GLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 309 ~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
++.. ++.+++.|+++++.+ .+++..+++.|+++++|++.++| +++..++....... .+||.+++| |+++
T Consensus 218 g~~~-~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~---~~lr~i~~g--G~~l 286 (501)
T 3ipl_A 218 GLSV-LLRAVIEGFTVRIVD----KFNAEQILTMIKNERITHISLVP-QTLNWLMQQGLHEP---YNLQKILLG--GAKL 286 (501)
T ss_dssp HHHH-HHHHHHHTCEEEECS----SCCHHHHHHHHHHSCCCEEEECH-HHHHHHHHHTCCSC---TTCCEEEEC--SSCC
T ss_pred HHHH-HHHHHHcCceEEeCC----CCCHHHHHHHHHHcCCcEEEchH-HHHHHHHhcCCCCc---CcccEEEEe--CCCC
Confidence 9986 999999999999998 68999999999999999999996 47777776543322 389999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++++.++|.+. |++ ++|.||+||++..++..... .......++|+
T Consensus 287 ~~~~~~~~~~~----~~~---~~~~YG~TE~~~~~~~~~~~----------------------------~~~~~~~~~G~ 331 (501)
T 3ipl_A 287 SATMIETALQY----NLP---IYNSFGMTETCSQFLTATPE----------------------------MLHARPDTVGM 331 (501)
T ss_dssp CHHHHHHHHHT----TCC---EEEEEEEGGGTEEEEEECHH----------------------------HHHHCTTCCBE
T ss_pred CHHHHHHHHHh----CCC---EeccccccccccceeecCcc----------------------------ccccCCCCCCC
Confidence 99999999873 554 99999999998654432210 00123568999
Q ss_pred CCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCe
Q psy14338 469 VMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGL 548 (1761)
Q Consensus 469 p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~ 548 (1761)
|+++++++|+|++ .|+.|||+|+|+++++||||+|+.|++ |. +|||||||+|++++||+
T Consensus 332 p~~~~~~~i~d~~-------~~~~GEl~v~g~~~~~gY~~~~~~t~~-~~-------------~g~~~TGDl~~~~~~G~ 390 (501)
T 3ipl_A 332 PSANVDVKIKNPN-------KEGHGELMIKGANVMNGYLYPTDLTGT-FE-------------NGYFNTGDIAEIDHEGY 390 (501)
T ss_dssp ECTTCEEEEESCC-------SSCCEEEEEESTTSCSCCSBSTTCCCS-EE-------------TTEEEEEEEEEECTTSC
T ss_pred CCCCcEEEEecCC-------CCCccEEEEeccchhhhhCcChhhcch-hc-------------CCceecCCEEEEcCCCe
Confidence 9999999999975 366799999999999999999999987 63 78999999999999999
Q ss_pred EEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy14338 549 VFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDCSEEESFQWMSRVLQA 627 (1761)
Q Consensus 549 l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~ 627 (1761)
++|+||+|||||++|+||+|.|||++|.++++| .+|+|++.++. .++.++++++.....+.++++++|+++||.
T Consensus 391 l~~~GR~dd~ik~~G~~v~p~eiE~~l~~~p~V-----~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~l~~~l~~~L~~ 465 (501)
T 3ipl_A 391 VMIYDRRKDLIISGGENIYPYQIETVAKQFPGI-----SDAVCVGHPDDTWGQVPKLYFVSESDISKAQLIAYLSKHLAK 465 (501)
T ss_dssp EEEEEECCCCEECSSCEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEESSCCCHHHHHHHHHHHSCG
T ss_pred EEEEccccceEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEecccCCceEEEEEEeCCCCCHHHHHHHHHhhCcc
Confidence 999999999999999999999999999998888 79999999854 578889999988888999999999999999
Q ss_pred hhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 628 VDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 628 y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
||+|..+ +.+++||+|+||||||++|++....
T Consensus 466 ~~~P~~i-------~~v~~lP~t~~GKi~R~~l~~~~~~ 497 (501)
T 3ipl_A 466 YKVPKHF-------EKVDTLPYTSTGKLQRNKLYREGHH 497 (501)
T ss_dssp GGSCSEE-------EECSSCC------------------
T ss_pred ccCCCEE-------EEecccCCCCCCCEeHHHHhhcccc
Confidence 9999986 5569999999999999999987643
|
| >1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-70 Score=724.78 Aligned_cols=514 Identities=15% Similarity=0.151 Sum_probs=411.6
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+++++|+++++++||++|+++.+.++...+++||+||+++++++|+.|++ +.|+++||+|+|+++|+ +++
T Consensus 82 n~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~-------~~Gv~~Gd~V~i~~~~~--~e~ 152 (663)
T 1ry2_A 82 NACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTY-------SMGVRKGDTVAVYMPMV--PEA 152 (663)
T ss_dssp CHHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHH-------TSCCCTTCEEEECCCSS--HHH
T ss_pred cHHHHHHHHHhccCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-------hcCCCCCCEEEEEcCCC--HHH
Confidence 578999999999999999999864321122689999999999999999962 46799999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccC-------------cccc-cccceeccC
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGL-------------PKTA-AGEVVAFKG 226 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~-------------~~~~-~~~~~~~~~ 226 (1761)
++++|||+++|++++|++|.++.+ ++.++++++++++||+++...... .... ...++.+..
T Consensus 153 v~a~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 227 (663)
T 1ry2_A 153 IITLLAISRIGAIHSVVFAGFSSN-----SLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRK 227 (663)
T ss_dssp HHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECS
T ss_pred HHHHHHHHHcCCEEEeeCCCCCHH-----HHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEec
Confidence 999999999999999999999976 899999999999999987653211 0000 011111111
Q ss_pred CC--cc------eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCCe
Q psy14338 227 WP--KL------TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCR-ALTQACHYTEGEN 297 (1761)
Q Consensus 227 ~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~ 297 (1761)
.. .. .....+.... .....+.....++|++||+|||||||+||||+++|++++..+. .....++++++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~ 306 (663)
T 1ry2_A 228 TNNPSVAFHAPRDLDWATEKKK-YKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDV 306 (663)
T ss_dssp SCCSSCCCCSSSEEEHHHHHTT-SCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCE
T ss_pred CCCCccccCCCccccHHHHHhh-cCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcE
Confidence 00 00 0000111111 1111223345789999999999999999999999999887664 4556789999999
Q ss_pred EEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCc
Q psy14338 298 MVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSS 375 (1761)
Q Consensus 298 ~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~ 375 (1761)
+++++|++|+++....++.+|++|+++++.+.....+++..+++.|++++||+++++| +++..++.... ....++++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-s~~~~l~~~~~~~~~~~~l~s 385 (663)
T 1ry2_A 307 FFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAP-TALRLLKRAGDSYIENHSLKS 385 (663)
T ss_dssp EEECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECH-HHHHHHTTSCTTSSSSCCCTT
T ss_pred EEEcCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecH-HHHHHHHhcCccccccCCcCc
Confidence 9999999999998435899999999999997432236899999999999999999986 57777776543 34567899
Q ss_pred eeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCC
Q psy14338 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQE 455 (1761)
Q Consensus 376 Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 455 (1761)
||.+++| ||++++++.++|.+.++..++ .++|.||+||++..++.....
T Consensus 386 Lr~i~~g--Ge~l~~~~~~~~~~~~g~~~~---~i~~~YG~TE~~~~~~~~~~~-------------------------- 434 (663)
T 1ry2_A 386 LRCLGSV--GEPIAAEVWEWYSEKIGKNEI---PIVDTYWQTESGSHLVTPLAG-------------------------- 434 (663)
T ss_dssp CCEEEEC--SSCCCHHHHHHHHHTTSCSSS---CEEECBCCTTTCSCSEECCTT--------------------------
T ss_pred eEEEEEE--cCCCCHHHHHHHHHHhCCCCc---eEEEeECCccccCeeeccCCC--------------------------
Confidence 9999999 999999999999988731113 499999999998654432210
Q ss_pred CccCcccccccCCCCCCcEEEEEeC-CCCcccCCC-CCceEEEEec--CCccccccCCCccccccccccccccCCCccCC
Q psy14338 456 NSLTSLTLQDCGQVMPGCIMTVVKM-DSPSYLCKT-DEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQ 531 (1761)
Q Consensus 456 ~~~~~~~~~~iG~p~~~~~~~I~d~-~~~~~~~p~-G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~ 531 (1761)
.....+.+++|+|++|++++|+|+ +++ ++|. |+.|||+|+| |++++||||+|+.|.+.|... .
T Consensus 435 -~~~~~~~gs~G~p~~g~~v~i~d~~~g~--~v~~~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~----------~ 501 (663)
T 1ry2_A 435 -GVTPMKPGSASFPFFGIDAVVLDPNTGE--ELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNP----------Y 501 (663)
T ss_dssp -TCCCCCTTCCCEECTTCCEEEECSSSTT--CEECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSS----------S
T ss_pred -CCcccCCCccccCcCCCeEEEEcCCCCC--cCCCCCcceEEEEecCCCchhcccccChHHHHHhhhcC----------C
Confidence 001234678999999999999999 776 4777 9999999999 589999999999999888521 2
Q ss_pred CceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCC
Q psy14338 532 DTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRP 610 (1761)
Q Consensus 532 ~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~ 610 (1761)
+|||||||+|++|+||+|+|+||+|||||++|+||+|.|||++|.+++.| .+|+|++.++. .++.++|||++.+
T Consensus 502 ~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~~p~V-----~ea~Vvg~~~~~~g~~~~a~Vv~~~ 576 (663)
T 1ry2_A 502 PGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIV-----AECAVVGFNDDLTGQAVAAFVVLKN 576 (663)
T ss_dssp TTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHHHHHHHSSTTE-----EEEEEECCCCCTTSCCCEEEEEEC-
T ss_pred CCEEEcCCEEEEcCCCCEEEEeecCCEEEECCEEcCHHHHHHHHHhCCCc-----ceEEEEEEecCCCCeEEEEEEEEcC
Confidence 68999999999999999999999999999999999999999999998887 79999999854 6788999999875
Q ss_pred CCC------------HHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 611 DCS------------EEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 611 ~~~------------~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+.. .++++++|+++||.||+|..| +.+++||+|+||||+|++|++.+..
T Consensus 577 ~~~~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i-------~~v~~lP~T~sGKi~R~~L~~~~~~ 637 (663)
T 1ry2_A 577 KSSWSTATDDELQDIKKHLVFTVRKDIGPFAAPKLI-------ILVDDLPKTRSGKIMRRILRKILAG 637 (663)
T ss_dssp -----------CCSHHHHHHHHHHHHTCTTTSCSEE-------EECSCCCBCTTSCBCHHHHHHSCC-
T ss_pred CCccccccchhHHHHHHHHHHHHHHhCCCCcCCeEE-------EEcCCCCCCCccCchHHHHHHHHcC
Confidence 422 468999999999999999986 5569999999999999999987653
|
| >3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-71 Score=721.85 Aligned_cols=506 Identities=16% Similarity=0.213 Sum_probs=381.6
Q ss_pred cccccccccccccCCCCcCCCCCCCceEEccCC---CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHH
Q psy14338 1161 YARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTR---SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDL 1237 (1761)
Q Consensus 1161 ~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~---~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~ 1237 (1761)
+..++++.|.+++. ++||++|+++.+.. ...+++||+||+++++++|++|++. |+++||+|+|+++|++++
T Consensus 17 ~~~~l~~~l~~~a~-----~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~-Gv~~gd~V~i~~~~~~~~ 90 (549)
T 3g7s_A 17 PKISLADRIDAAAE-----KFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRK-GVRKGEHVGVCIPNSIDY 90 (549)
T ss_dssp CCCCTTHHHHHHHH-----HHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHH
T ss_pred CCCCHHHHHHHHHH-----hCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHH
Confidence 45677888877765 67999999965421 2238999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccc----cc----ccCCccc
Q psy14338 1238 ICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVV----DI----KSWPTIL 1309 (1761)
Q Consensus 1238 iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~----~~----~~~~~~~ 1309 (1761)
++++|||+++|+++|||||.+|.+ ++.+++++++++++|++......+........+ .. ..+....
T Consensus 91 ~~~~lA~~~~G~~~vpl~~~~~~~------~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (549)
T 3g7s_A 91 VMTIYALWRVAATPVPINPMYKSF------ELEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFVVGGEVNSLSEVM 164 (549)
T ss_dssp HHHHHHHHHTTCEEEECCTTCCHH------HHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSCCCEEEEETCSSSCHHHHH
T ss_pred HHHHHHHHHhCCEEEccCCCCCHH------HHHHHHHhcCCCEEEEChHHHHHHHHHHhhCCCcEEEEeCCCCcCHHHHH
Confidence 999999999999999999988887 999999999999999998876655443221100 00 0000000
Q ss_pred cCCCCccchhhhccCCCCC-CCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHH
Q psy14338 1310 DTDDMPKKKLAALYRAPTA-EMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALW 1388 (1761)
Q Consensus 1310 ~~~~~~~~~~~~~~~~~~~-~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 1388 (1761)
.... .........+ +++|||+|||||||+||||+++|+++.+.+.+....+++.++|+++.++|++|..++..
T Consensus 165 ~~~~-----~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~- 238 (549)
T 3g7s_A 165 DSGS-----EDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHSAEFGL- 238 (549)
T ss_dssp HHSC-----SCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTSHHHHHH-
T ss_pred hcCc-----cccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHHHHHHHH-
Confidence 0000 0001122334 89999999999999999999999999999999999999999999999999998888744
Q ss_pred HHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCC
Q psy14338 1389 VLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP 1468 (1761)
Q Consensus 1389 ~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~ 1468 (1761)
++.++..|+++++.+. +++..+++.|+++++|+++++|+++..|++... ......++++||.+++||++++
T Consensus 239 ~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----~~~~~~~~~~lr~~~~gg~~l~ 309 (549)
T 3g7s_A 239 VNLMVTVGNEYVVMGM----FNQEMLAENIEKYKGTFSWAVPPALNVLVNTLE-----SSNKTYDWSYLKVFATGAWPVA 309 (549)
T ss_dssp HTTHHHHCCEEEEESS----CCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHH-----HSCCCCCCTTCCEEEEESSCCC
T ss_pred HHHHHhcCceEEEcCC----CCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhh-----hhcccCCccceeEEEeCCccCC
Confidence 8889999999999884 799999999999999999999999999987431 1122367899999999999999
Q ss_pred hHHHHHHHHHHHh-hCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccccc
Q psy14338 1469 RIHLTSAFSKLFS-ALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL 1547 (1761)
Q Consensus 1469 ~~~l~~~~~~~~~-~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 1547 (1761)
+ .+.+++.+.+. .+|.....+++.||+||++.+++...... .....++|+|+
T Consensus 310 ~-~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~--------------------------~~~~~~~G~p~ 362 (549)
T 3g7s_A 310 P-ALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPLR--------------------------LDKSTTQGVPM 362 (549)
T ss_dssp H-HHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGGG--------------------------GGGTTSCCEEC
T ss_pred H-HHHHHHHHHHHhhcCCccccccceEeccccchhhhcCCccc--------------------------cCcCCCccccC
Confidence 9 78888877632 23544478999999999876654322100 01234599999
Q ss_pred CCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCC
Q psy14338 1548 PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVA 1627 (1761)
Q Consensus 1548 ~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d 1627 (1761)
+|++++|+|+++++++|.|++|||+|+|+++++|||| +|+.|+++|..++ ++.+||||||+|++ |+|
T Consensus 363 ~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v~~GY~~---~~~~t~~~f~~~~----~g~~~~~TGDl~~~------~~d 429 (549)
T 3g7s_A 363 SDIELKVISLEDGRELGVGESGEIVIRGPNIFKGYWK---REKENQECWWYDE----KGRKFFRTGDVGFI------DEE 429 (549)
T ss_dssp TTCEEEEECSSSCCEECTTCCEEEEEESTTSCSEETT---CTTGGGTSEEECT----TCCEEEEEEEEEEE------CTT
T ss_pred CCCEEEEEeCCCCcCCCCCCceEEEEECcchhhhhCC---ChhhhhhhhhccC----CCCceEccCcEEEE------cCC
Confidence 9999999997779999999999999999999999999 9999999996433 45679999999999 999
Q ss_pred CCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC---Cchh
Q psy14338 1628 GAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG---NESE 1699 (1761)
Q Consensus 1628 ~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~---~~~~ 1699 (1761)
|+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+... ...+
T Consensus 430 --------G~----l~~~GR~dd~ik~~G~~v~p~eIE~-~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~ 496 (549)
T 3g7s_A 430 --------GF----LHFQDRVKEVIKYKGYTIAPFELEA-LLMKHEAVMDVAVIGKPDEEAGEVPKAFIVLKPEYRGKVD 496 (549)
T ss_dssp --------SC----EEEEEEC------------CHHHHH-HHTTSTTEEEEEEECCCC------CEEEEEECSTTTTSCC
T ss_pred --------ce----EEEeccccceEEECCEEECHHHHHH-HHHhCCCeeeEEEEeeEccccCceEEEEEEECCCccCcCC
Confidence 99 9999999999999999999999999 8999999999999974 346788888753 3567
Q ss_pred HhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1700 ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1700 ~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
.++|+++|+++ || .||+|+.|++++ +||+|+||||||++|++.+...
T Consensus 497 ~~~l~~~l~~~-L~-~~~~P~~i~~v~--~lP~t~~GKi~R~~L~~~~~~~ 543 (549)
T 3g7s_A 497 EEDIIEWVRER-IS-GYKRVREVEFVE--ELPRTASGKLLRRLLREKEAEG 543 (549)
T ss_dssp HHHHHHHHHTT-CC------CCCCEEE--ECC-------------------
T ss_pred HHHHHHHHHHh-cc-CcccceEEEEec--cCCCCCCcCEeHHHHHHHhhcc
Confidence 78999999997 98 999999999999 9999999999999999988554
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-70 Score=720.96 Aligned_cols=492 Identities=15% Similarity=0.177 Sum_probs=406.0
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
+.++++.|.+++. ||++|++ ++++++||+||+++++++|++|++. |+++||+|+|+++||+++++++
T Consensus 26 ~~~l~~~~~~~a~-------pd~~Av~-----~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~V~l~~~~s~~~vva~ 92 (617)
T 3rg2_A 26 DLPLTDILTRHAA-------SDSIAVI-----DGERQLSYRELNQAADNLACSLRRQ-GIKPGETALVQLGNVAELYITF 92 (617)
T ss_dssp CCCTTHHHHTTTT-------CCSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHHHH
T ss_pred cCCHHHHHHHhhC-------CCCeEEe-----cCCceEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHH
Confidence 4577888877764 9999999 7889999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH--------HHHh-hhccccccccccCCccccCC
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI--------KLLK-SKEASNVVDIKSWPTILDTD 1312 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~ 1312 (1761)
|||+|+|+++||+||.+|.+ ++.++++++++++++++.... ..+. .......+............
T Consensus 93 lA~l~aG~~~vpl~~~~~~~------~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (617)
T 3rg2_A 93 FALLKLGVAPVLALFSHQRS------ELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQ 166 (617)
T ss_dssp HHHHHHTCEEEEECTTCCHH------HHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCSTTBHH
T ss_pred HHHHhcCeEEccCCccccHH------HHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccccccchh
Confidence 99999999999999998888 999999999999999986532 1111 11110000000000000000
Q ss_pred CC-ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHH-HHH
Q psy14338 1313 DM-PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFAL-WVL 1390 (1761)
Q Consensus 1313 ~~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~ 1390 (1761)
.. .............++++|||+|||||||+||||+++|+++++.+.+....+++.++|+++.++|++|.+++.. +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~ 246 (617)
T 3rg2_A 167 DAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSL 246 (617)
T ss_dssp HHHHSCCSSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHH
T ss_pred hhhcccccccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhhhhHHHHH
Confidence 00 0000011123456799999999999999999999999999999999999999999999999999988888754 689
Q ss_pred HHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChH
Q psy14338 1391 SSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRI 1470 (1761)
Q Consensus 1391 ~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~ 1470 (1761)
.+|+.|+++++.++ .++..+++.|+++++|+++++|+++..+++.... .....++++||.+++|||++++
T Consensus 247 ~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~l~~lr~i~~gGe~l~~- 316 (617)
T 3rg2_A 247 GVFLAGGTVVLAAD----PSATLCFPLIEKHQVNVTALVPPAVSLWLQALIE-----GESRAQLASLKLLQVGGARLSA- 316 (617)
T ss_dssp HHHHHTCEEEECSS----CCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHT-----TCCTTTTTTCCEEEEESSCCCH-
T ss_pred HHHHcCCEEEEeCC----CCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhc-----ccccccCCCccEEEEcCCcCCH-
Confidence 99999999999875 6899999999999999999999999999875321 1233478999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccccc-CC
Q psy14338 1471 HLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL-PG 1549 (1761)
Q Consensus 1471 ~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~ 1549 (1761)
.+.++|.+.++ +.++|.||+||++..+..... .......++|+|+ ++
T Consensus 317 ~~~~~~~~~~~------~~~~~~YG~tE~~~~~~~~~~--------------------------~~~~~~~~~G~p~~~~ 364 (617)
T 3rg2_A 317 TLAARIPAEIG------CQLQQVFGMAEGLVNYTRLDD--------------------------SAEKIIHTQGYPMCPD 364 (617)
T ss_dssp HHHHHHHHHTC------SEEEEEEEETTEEEEECCTTS--------------------------CHHHHHHCCCEESCTT
T ss_pred HHHHHHHHHhC------CcEEEEeccCcceeecccCCC--------------------------cccccccCCCccCCCC
Confidence 78888877653 689999999998754332110 0011234689998 78
Q ss_pred cEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1550 VKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1550 ~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
++++|+|++ ++++|.|++|||||+|+++++|||| +|++|+++| ..++||||||+|++ ++|
T Consensus 365 ~~~~i~d~~-~~~~p~G~~GEl~i~G~~v~~GY~~---~p~~t~~~f--------~~~~~yrTGDl~~~------~~d-- 424 (617)
T 3rg2_A 365 DEVWVADAE-GNPLPQGEVGRLMTRGPYTFRGYYK---SPQHNASAF--------DANGFYCSGDLISI------DPE-- 424 (617)
T ss_dssp CEEEEECTT-SCBCCTTCCEEEEEECSSSCSCCTT---CHHHHHHHB--------CTTSCEEEEEEEEE------CTT--
T ss_pred ceEEEECCC-CCCCCCCCceEEEecCccccchhcC---Chhhhhhcc--------CCCCceecCceEEE------cCC--
Confidence 899999955 8999999999999999999999999 999999999 35789999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHH
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLV 1704 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~ 1704 (1761)
|+ |+|+||+|||||++|+||+|+|||+ +|.+||+|.+|+|++. ++.++++++... ..+.++++
T Consensus 425 ------G~----l~~~GR~dd~iki~G~ri~~~eIE~-~l~~~p~V~~a~vv~~~~~~~~~~~~a~vv~~~-~~~~~~l~ 492 (617)
T 3rg2_A 425 ------GY----ITVQGREKDQINRGGEKIAAEEIEN-LLLRHPAVIYAALVSMEDELMGEKSCAYLVVKE-PLRAVQVR 492 (617)
T ss_dssp ------SC----EEEEEECSSEEEETTEEEEHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEESS-CCCHHHHH
T ss_pred ------ce----EEEEeecCCEEEECCEEeCHHHHHH-HHHhCCCeeEEEEEeccCcccCeeEEEEEEeCC-CCCHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 457888888764 46678899
Q ss_pred HHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1705 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1705 ~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
++++++.|| .||+|+.|++++ +||+|+|||+||++|++.+.+
T Consensus 493 ~~l~~~~lp-~~~vP~~~~~v~--~lP~t~~GKidR~~L~~~~~~ 534 (617)
T 3rg2_A 493 RFLREQGIA-EFKLPDRVECVD--SLPLTAVGKVDKKQLRQWLAS 534 (617)
T ss_dssp HHHHTTTCC-GGGSCSEEEECS--CCCBCTTSSBCHHHHHHHHHH
T ss_pred HHHHhCCCc-cccCCcEEEEec--ccCCCCCCCCcHHHHHHHHhc
Confidence 999984488 999999999999 999999999999999998743
|
| >4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-72 Score=728.94 Aligned_cols=488 Identities=20% Similarity=0.232 Sum_probs=323.0
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++++.|.+++. ++||++|++ ++++++||+||+++++++|++|++. |+++||+|+|+++|++++++++
T Consensus 74 ~~~l~~~l~~~a~-----~~pd~~A~~-----~~~~~~Ty~el~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~ 142 (570)
T 4gr5_A 74 GACVHELFEAQAA-----RAPDAVALL-----HEADELTYGALNERANRLAHRLVGL-GVAPGTLVGVHLERGFDMVVAL 142 (570)
T ss_dssp SCCHHHHHHHHHH-----HCTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHHHH
T ss_pred cCCHHHHHHHHHH-----HCCCCeEEE-----CCCCcEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHHHH
Confidence 4678888888776 779999999 6788999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhh
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAA 1321 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1321 (1761)
|||+++|+++|||+|.+|.+ ++.+++++++++++|++......+..... +... . ..........
T Consensus 143 lA~~~~G~~~vpl~~~~~~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~---~~~~---~----~~~~~~~~~~ 206 (570)
T 4gr5_A 143 LAVLKAGGGYTMLDPQFPVE------RLALSLEDTGAPLLVTSRPLSGRLTGTTT---LYVE---D----EAASDAPAGN 206 (570)
T ss_dssp HHHHHTTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECTTTTTSSCSSEE---EECC---C-----------CCC
T ss_pred HHHHHHCCEEEEcCCCChHH------HHHHHHHhcCCCEEEecchhhhcccCCcc---eeee---c----cccccccccc
Confidence 99999999999999988777 99999999999999999765332221110 0000 0 0000001111
Q ss_pred ccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEE
Q psy14338 1322 LYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 1401 (1761)
Q Consensus 1322 ~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl 1401 (1761)
......++++|||+|||||||.||||+++|+++.+.+.. ...+++.++|+++.++|++|+.+. +.++.+|+.|+++++
T Consensus 207 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~ 284 (570)
T 4gr5_A 207 LATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFG-LELFGALLFGARCVL 284 (570)
T ss_dssp CCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHH-HHHHHHHTTTCEEEE
T ss_pred cCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHH-HHHHHHHhcCCEEEE
Confidence 223467899999999999999999999999999877655 455678888999888888887655 678999999999999
Q ss_pred eCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHh
Q psy14338 1402 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFS 1481 (1761)
Q Consensus 1402 ~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~ 1481 (1761)
.+.. .+++..+++.|+++++|+++++|+++..|++.. ..++++||.+++|||++++ .+.+++.+.++
T Consensus 285 ~~~~--~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~----------~~~~~~lr~~~~gG~~l~~-~~~~~~~~~~~ 351 (570)
T 4gr5_A 285 QSGQ--NPDPLEIGELVARHGVTMLQLSASLFNFLVDEV----------PEAFEGVRYAITGGEPASV-PHVAKARRDHP 351 (570)
T ss_dssp CSSS--SCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC----------GGGGTTCSEEEEESSCCCH-HHHHHHHHHCT
T ss_pred cCCc--cCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhc----------hhhCCCceEEEEecccCCH-HHHHHHHHhCC
Confidence 8753 479999999999999999999999999997642 2357899999999999998 67777777654
Q ss_pred hCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCC
Q psy14338 1482 ALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKG 1561 (1761)
Q Consensus 1482 ~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~ 1561 (1761)
. ..+++.||+||++++++..... .. .......++|+|++|++++|+|++ ++
T Consensus 352 ~-----~~l~~~YG~TE~~~~~~~~~~~---------~~--------------~~~~~~~~iG~p~~~~~v~i~d~~-~~ 402 (570)
T 4gr5_A 352 A-----LRLGNGYGPAESMGFTTHHAVV---------AG--------------DLSGTALPIGVPLAGKRAYVLDDD-LK 402 (570)
T ss_dssp T-----CEEEEEECCGGGCSCSEEEECC---------GG--------------GTTSSSCCCBEECTTEEEEEECTT-SC
T ss_pred C-----cEEEEeechhhheeeeeeeeec---------cc--------------ccCCCccccceeeCCCEEEEECCC-CC
Confidence 2 6899999999986543321100 00 001123469999999999999965 89
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
++|.|++|||+|+|+++++|||| +|++|+++|..+||.+.+++|||||||+|++ |+| |+
T Consensus 403 ~~~~G~~GEl~v~g~~v~~GY~~---~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~------d~d--------G~---- 461 (570)
T 4gr5_A 403 PAANGALGELYVAGAGLAHGYVS---RPALTAERFVADPFAGPGGERMYRTGDLARR------RAD--------GV---- 461 (570)
T ss_dssp BCCTTCEEEEEEEETTCCCEETT---CHHHHHHHEEECTTCCSSCCEEEEEEEEEEE------CTT--------SC----
T ss_pred CCCCCCcEEEEEeecccchhcCC---CchhhhcccccCCCCCCCCCEEEeCCCeEEE------CCC--------Ce----
Confidence 99999999999999999999999 9999999999999987778899999999999 999 99
Q ss_pred EEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC--CchhHhhHHHHHHHHHhhh
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG--NESEALDLVPLVTNAVLEE 1714 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~--~~~~~~~l~~~l~~~~Lp~ 1714 (1761)
|+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+... ...+.++|+++|+++ ||
T Consensus 462 l~~~GR~~d~Ik~~G~~v~p~eIE~-~l~~~p~V~~a~Vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~l~~~l~~~-l~- 538 (570)
T 4gr5_A 462 LEYVGRADDQVKIRGFRVEPGEVEA-RLVGHPAVRQAAVLAQDSRLGDKQLVAYVVAERADAPPDAAELRRHVAEA-LP- 538 (570)
T ss_dssp EEEEEC--------------------------------------------------------------------------
T ss_pred EEEEcccCCEEEECcEEeCHHHHHH-HHhcCCCcceEEEEEeeCCCCCeEEEEEEEecCCCCCcCHHHHHHHHHhh-Cc-
Confidence 9999999999999999999999999 8999999999999974 347888887642 345678999999997 88
Q ss_pred cCceeeEEEEECCCCccCCCchhhhHHHHHHH
Q psy14338 1715 HHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 1746 (1761)
Q Consensus 1715 ~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~ 1746 (1761)
.||+|..|++++ +||+|++|||||++|++.
T Consensus 539 ~~~~P~~i~~v~--~lP~t~~GKi~R~~L~~~ 568 (570)
T 4gr5_A 539 AYMVPVECVPVD--ELPRTPNGKLDRRALTGS 568 (570)
T ss_dssp --------------------------------
T ss_pred cccCCcEEEEcc--cCCCCCCcCcchHhhhcc
Confidence 999999999999 999999999999999875
|
| >1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-71 Score=716.39 Aligned_cols=485 Identities=16% Similarity=0.209 Sum_probs=400.6
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++++.|.+++. ++||++|++ ++++++||+||+++++++|+.|++. |+++||+|+|+++|++++++++
T Consensus 38 ~~~l~~~l~~~a~-----~~p~~~Al~-----~~~~~~Ty~eL~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~ 106 (563)
T 1amu_A 38 DKTIHQLFEEQVS-----KRPNNVAIV-----CENEQLTYHELNVKANQLARIFIEK-GIGKDTLVGIMMEKSIDLFIGI 106 (563)
T ss_dssp TCCHHHHHHHHHH-----HCTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHHHH
T ss_pred CCcHHHHHHHHHH-----HCCCCeEEE-----eCCceecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHHHH
Confidence 3577888877765 779999999 6778999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhh
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAA 1321 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1321 (1761)
|||+++|+++|||+|.+|.+ ++.+++++++++++|++......+........+.. +. ...........
T Consensus 107 lA~~~~Gav~vpl~~~~~~~------~l~~il~~~~~~~li~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~ 174 (563)
T 1amu_A 107 LAVLKAGGAYVPIDIEYPKE------RIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEI--FE----EDTIKIREGTN 174 (563)
T ss_dssp HHHHHTTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEEE--CC----CSTTTTSCCSC
T ss_pred HHHHHhCCEEEEeCCCCcHH------HHHHHHHhcCCCEEEEcCchhhhhhhccccCceee--ec----chhhccccCcc
Confidence 99999999999999988877 99999999999999999877655443221100000 00 00000000011
Q ss_pred ccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEE
Q psy14338 1322 LYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 1401 (1761)
Q Consensus 1322 ~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl 1401 (1761)
......++++|||+|||||||.||||+++|+++.+.+.+....+++.++|+++.+++++|+.++ +.++.+|+.|+++++
T Consensus 175 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~ 253 (563)
T 1amu_A 175 LHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASV-WEMFMALLTGASLYI 253 (563)
T ss_dssp CCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEE
T ss_pred CCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHH-HHHHHHHHCCCEEEE
Confidence 1234567899999999999999999999999999999998889999999999999999998877 678999999999999
Q ss_pred eCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHh
Q psy14338 1402 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFS 1481 (1761)
Q Consensus 1402 ~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~ 1481 (1761)
.+.. ..+++..+++.|+++++|+++++|+++..+.. ..+++||.+++||+++++ .+.++|.+.
T Consensus 254 ~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~-------------~~~~~lr~~~~gG~~l~~-~~~~~~~~~-- 316 (563)
T 1amu_A 254 ILKD-TINDFVKFEQYINQKEITVITLPPTYVVHLDP-------------ERILSIQTLITAGSATSP-SLVNKWKEK-- 316 (563)
T ss_dssp CCHH-HHTCHHHHHHHHHHTTCCEEEECHHHHTTSCT-------------TTCCSCSEEEEESSCCCH-HHHHHHTTT--
T ss_pred cChH-hhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHh-------------cccccccEEEEEEecCCH-HHHHHHHhC--
Confidence 8752 23689999999999999999999999877622 246789999999999999 676666432
Q ss_pred hCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCC
Q psy14338 1482 ALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKG 1561 (1761)
Q Consensus 1482 ~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~ 1561 (1761)
..+++.||+||++.+++...... ....+..++|+|++|++++|+|++ ++
T Consensus 317 ------~~~~~~YG~TE~~~~~~~~~~~~------------------------~~~~~~~~vG~p~~~~~v~i~d~~-~~ 365 (563)
T 1amu_A 317 ------VTYINAYGPTETTICATTWVATK------------------------ETIGHSVPIGAPIQNTQIYIVDEN-LQ 365 (563)
T ss_dssp ------SEEEEEECCGGGSSCSEEEECCS------------------------SCCCSSCCCBEECTTEEEEEECTT-SC
T ss_pred ------CeEEEEECcCHHhHhheeeeccc------------------------ccCCCCCcccceeCCCEEEEECCC-cC
Confidence 57999999999875433211000 000123569999999999999965 89
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
++|.|++|||+|+|+++++|||| +|++|+++|..+|+. +++|||||||+|++ |+| |+
T Consensus 366 ~~~~g~~GEl~v~g~~v~~GY~~---~pe~t~~~f~~~~~~--~g~~w~~TGDlg~~------d~d--------G~---- 422 (563)
T 1amu_A 366 LKSVGEAGELCIGGEGLARGYWK---RPELTSQKFVDNPFV--PGEKLYKTGDQARW------LSD--------GN---- 422 (563)
T ss_dssp BCCTTCEEEEEEEETTCCCEETT---CHHHHHHHEEECSSS--TTSEEEEEEEEEEE------CTT--------SC----
T ss_pred CCCCCCcEEEEEechhhChhhCC---CchhhhhhcccCCCC--CCCEEEecCCEEEE------cCC--------Ce----
Confidence 99999999999999999999999 999999999887764 36789999999999 999 99
Q ss_pred EEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCCchhHhhHHHHHHHHHhhhcC
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHH 1716 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~ 1716 (1761)
|+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++.. +.++|+|+.. ...+.++|+++|+++ || .|
T Consensus 423 l~i~GR~~d~Ik~~G~~V~p~eIE~-~l~~~p~V~~a~Vv~~~~~~~~~~~~a~vv~~-~~~~~~~l~~~l~~~-L~-~y 498 (563)
T 1amu_A 423 IEYLGRIDNQVKIRGHRVELEEVES-ILLKHMYISETAVSVHKDHQEQPYLCAYFVSE-KHIPLEQLRQFSSEE-LP-TY 498 (563)
T ss_dssp EEEEEEGGGEEEETTEEEEHHHHHH-HHTTSTTEEEEEEEEEECTTSCEEEEEEEEES-SCCCHHHHHHHHHHH-SC-GG
T ss_pred EEEeccccCEEEECCEEeCHHHHHH-HHHhCCCcceEEEEEeecCCCCeEEEEEEEeC-CCCCHHHHHHHHHhh-Cc-hh
Confidence 9999999999999999999999999 89999999999999753 3688888865 345678999999997 98 99
Q ss_pred ceeeEEEEECCCCccCCCchhhhHHHHHHHH
Q psy14338 1717 LIVGVAVVVDPGVVPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1717 ~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~ 1747 (1761)
|+|+.|++++ +||+|+||||||++|++..
T Consensus 499 ~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~ 527 (563)
T 1amu_A 499 MIPSYFIQLD--KMPLTSNGKIDRKQLPEPD 527 (563)
T ss_dssp GSCSEEEECS--SCCBCTTSSBCGGGSCCCC
T ss_pred hCCcEEEEec--ccCCCCCcChhHHhcCCcc
Confidence 9999999999 9999999999999998764
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-70 Score=717.23 Aligned_cols=552 Identities=24% Similarity=0.384 Sum_probs=439.1
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++.+.|.+++. ++||++|+++.+. .+++++||+||+++++++|++|++. |+++||+|+|+++|++++++++
T Consensus 10 ~~tl~~~l~~~a~-----~~p~~~a~~~~~~-~~~~~~Ty~eL~~~~~~lA~~L~~~-gv~~gd~V~i~~~~~~~~~~~~ 82 (590)
T 3kxw_A 10 CQSLVDVVRLRAL-----HSPNKKSCTFLNK-ELEETMTYEQLDQHAKAIAATLQAE-GAKPGDRVLLLFAPGLPLIQAF 82 (590)
T ss_dssp CSSHHHHHHHHHH-----HCTTSEEEEEEET-TEEEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHHHH
T ss_pred cccHHHHHHHHHH-----hCCCCeEEEEEcC-CeeEEEcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHH
Confidence 3456677777665 7799999997663 4578999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCc-cchhh
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMP-KKKLA 1320 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1320 (1761)
|||+++|+++|||+|.++.. ..+++.++++++++++++++.+....+............... ........ .....
T Consensus 83 lA~~~~G~~~vpl~~~~~~~---~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 158 (590)
T 3kxw_A 83 LGCLYAGCIAVPIYPPAQEK---LLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIP-AIALESIELNRSSS 158 (590)
T ss_dssp HHHHHTTCEEEEECCCCSHH---HHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEE-EEEGGGCCGGGGGG
T ss_pred HHHHHhCcEEEEecCCCchH---HHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcccccccc-eeechhcccccccc
Confidence 99999999999999976421 234899999999999999998876655432100000000000 00000000 00111
Q ss_pred hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEE
Q psy14338 1321 ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSI 1400 (1761)
Q Consensus 1321 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~v 1400 (1761)
.......+++++||+|||||||+||||+++|+++++.+.+....+++.++|+++.++|++|++++...++.+++.|++++
T Consensus 159 ~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v 238 (590)
T 3kxw_A 159 WQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAI 238 (590)
T ss_dssp CCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEE
T ss_pred CCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEE
Confidence 12345678999999999999999999999999999999999999999999999999999999998656889999999999
Q ss_pred EeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHH
Q psy14338 1401 LIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLF 1480 (1761)
Q Consensus 1401 l~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~ 1480 (1761)
+.++..+..++..+++.|+++++|++.++|+++..+++.+. .......++++||.+++|||++++ .+.++|.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~~~~~~l~~lr~~~~gg~~l~~-~~~~~~~~~~ 313 (590)
T 3kxw_A 239 MMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIR----EEKKEGLDLSSWVTAFNGAEPVRE-ETMEHFYQAF 313 (590)
T ss_dssp ECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCC----GGGGTTCCCTTCCEEEECSSCCCH-HHHHHHHHHH
T ss_pred EeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhh----hhhccCCCchhhHHHhhCCCCCCH-HHHHHHHHHH
Confidence 98853333389999999999999999999999999987532 223456789999999999999999 8889999999
Q ss_pred hhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCC
Q psy14338 1481 SALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETK 1560 (1761)
Q Consensus 1481 ~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~ 1560 (1761)
..+|.....+++.||+||++.+++.................+....+.......+.....+++|+|+++ ++|+|++++
T Consensus 314 ~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d~~~~ 391 (590)
T 3kxw_A 314 KEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIIDPDTL 391 (590)
T ss_dssp GGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEECTTTC
T ss_pred HHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEcCCCC
Confidence 888877788999999999988777655443333333433333333333333334455567889999998 889998889
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccc
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHD 1640 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~ 1640 (1761)
+++|.|++|||+|+|+++++|||| +|++|+++|..+++...++.+||||||+|++ | | |+
T Consensus 392 ~~~~~g~~GEl~v~g~~v~~GY~~---~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~------d-d--------G~--- 450 (590)
T 3kxw_A 392 IPCDFDQVGEIWVQSNSVAKGYWN---QPEETRHAFAGKIKDDERSAIYLRTGDLGFL------H-E--------NE--- 450 (590)
T ss_dssp CBCCTTBCEEEEEESTTSCCCBTT---CHHHHHHHHCBCCTTC---CCBEEEEEEEEE------E-T--------TE---
T ss_pred cCCCCCCEEEEEEeCCcccccccC---ChhHHHHHHhccccCCCCCCcEEecCcEEEE------E-C--------CE---
Confidence 999999999999999999999999 9999999998776654345569999999999 8 8 99
Q ss_pred eEEEEcccCCeEEeCCeecChHHHHHHHH-HhccCcc--eeEEEee----CCeEEEEEEeCCC---chhHhhHHHHHHHH
Q psy14338 1641 AVFVVGALDETIMLRGMRYHPIDIENSVM-RAHKKIA--ECAVFTW----TNLLVVVVELDGN---ESEALDLVPLVTNA 1710 (1761)
Q Consensus 1641 ~l~~~GR~dd~Iki~G~rI~~~eIE~~~l-~~~p~V~--~a~Vv~~----~~~~~a~v~~~~~---~~~~~~l~~~l~~~ 1710 (1761)
|+|+||+|||||++|+||+|.|||+ +| ..||+|. +|+|++. ++.++++++.... ..+.++++++|+++
T Consensus 451 -l~~~GR~dd~Ik~~G~~v~p~eIE~-~l~~~~~~v~~~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~ 528 (590)
T 3kxw_A 451 -LYVTGRIKDLIIIYGKNHYPQDIEF-SLMHSPLHHVLGKCAAFVIQEEHEYKLTVMCEVKNRFMDDVAQDNLFNEIFEL 528 (590)
T ss_dssp -EEEEEESSCHHHHHHHTTHHHHHHH-HHHHSGGGGGEEEEEEEEEEETTEEEEEEEEEESCTTCCHHHHHHHHHHHHHH
T ss_pred -EEEEcCccceEEECCEecCHHHHHH-HHHhcCccccCccEEEEEecCCCCceEEEEEEeccccccchhHHHHHHHHHHH
Confidence 9999999999999999999999999 66 8899998 7888864 3467777776433 45678899999997
Q ss_pred HhhhcCceee-EEEEECCCCccCCCchhhhHHHHHHHHHcCCCChh
Q psy14338 1711 VLEEHHLIVG-VAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPI 1755 (1761)
Q Consensus 1711 ~Lp~~~~vP~-~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~~~ 1755 (1761)
|++.|++|. .+++++.++||+|+||||||++|++++.++++..+
T Consensus 529 -l~~~~~~p~~~i~~v~~~~lP~t~sGKi~R~~L~~~~~~~~~~~~ 573 (590)
T 3kxw_A 529 -VYENHQLEVHTIVLIPLKAMPHTTSGKIRRNFCRKHLLDKTLPIV 573 (590)
T ss_dssp -HHHHHSCCCCEEEEEETTCSCCCSCHHHHHHHHHHHHHHTCSCCS
T ss_pred -HHHHcCCceeEEEEECCCccCcCCCcHHHHHHHHHHHHcCCCcee
Confidence 775688886 56666322999999999999999999999887654
|
| >3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-70 Score=706.54 Aligned_cols=493 Identities=18% Similarity=0.200 Sum_probs=402.7
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
....++.+.|.+++. ++|+++|+++. +.++++||+||+++++++|++|++. |+++||+|+|+++|++++++
T Consensus 13 ~~~~~l~~~l~~~a~-----~~p~~~A~~~~---~~~~~~Ty~eL~~~~~~lA~~L~~~-Gv~~gd~V~i~~~~~~~~~~ 83 (517)
T 3r44_A 13 DKMKNIGWMLRQRAT-----VSPRLQAYVEP---STDVRMTYAQMNALANRCADVLTAL-GIAKGDRVALLMPNSVEFCC 83 (517)
T ss_dssp GGGGCHHHHHHHHHH-----HSTTSEEEEEG---GGTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHH
T ss_pred ccccCHHHHHHHHHH-----hCCCCeEEEeC---CcCceeeHHHHHHHHHHHHHHHHHc-CCCCcCEEEEEcCCCHHHHH
Confidence 344567777777765 77999999942 1234999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccc--cccCCccccCCC-Ccc
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVD--IKSWPTILDTDD-MPK 1316 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~ 1316 (1761)
++|||+++|+++|||||.+|.+ ++.+++++++++++|++......+.......... ...+........ ...
T Consensus 84 ~~lA~~~~G~~~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (517)
T 3r44_A 84 LFYGAAKLGAVAVPINTRLAAP------EVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADSLAERLRS 157 (517)
T ss_dssp HHHHHHHHTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSCCTTCCEEEEHHHHHHHHHH
T ss_pred HHHHHHHhCcEEEecCcccCHH------HHHHHHHhcCceEEEECCchHHHHHHHHhccCCccEEEEccCcccHHHHhhc
Confidence 9999999999999999988877 9999999999999999988766554432110000 000000000000 000
Q ss_pred chhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcC
Q psy14338 1317 KKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSG 1396 (1761)
Q Consensus 1317 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G 1396 (1761)
.....+.....+++++||+|||||||+||||+++|+++.+.+.+....+++.++|+++.++|++|+.++. ..+.+++.|
T Consensus 158 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~~~~G 236 (517)
T 3r44_A 158 AAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALT-TVIFSAMRG 236 (517)
T ss_dssp CCCCCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHH-HHHHHHHHT
T ss_pred cCcCCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHH-HHHHHHhcC
Confidence 0011122345789999999999999999999999999999999999999999999999999999988874 445555599
Q ss_pred ceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHH
Q psy14338 1397 HHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAF 1476 (1761)
Q Consensus 1397 ~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~ 1476 (1761)
+++++.+. +++..+++.|+++++|+++++|++++.+.+. ......++++||.+++|||++++ .+.++|
T Consensus 237 ~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------~~~~~~~~~~lr~i~~gGe~l~~-~~~~~~ 304 (517)
T 3r44_A 237 VTLISMPQ----FDATKVWSLIVEERVCIGGAVPAILNFMRQV-------PEFAELDAPDFRYFITGGAPMPE-ALIKIY 304 (517)
T ss_dssp CEEEECSS----CCHHHHHHHHHHTTCCEEEECHHHHHHHHHS-------HHHHHCCCTTCCEEEECSSCCCH-HHHHHH
T ss_pred eEEEEeCC----CCHHHHHHHHHHhCCeEEEeHHHHHHHHHhC-------cccccCCCCcccEEEECCCCCCH-HHHHHH
Confidence 99999874 7999999999999999999999999999763 12345678899999999999999 777777
Q ss_pred HHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEc
Q psy14338 1477 SKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIAN 1556 (1761)
Q Consensus 1477 ~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d 1556 (1761)
.+. | ..+++.||+||++..++.... .. ...+.+++|+|+++++++|+|
T Consensus 305 ~~~----~---~~~~~~YG~TE~~~~~~~~~~-----------~~--------------~~~~~~~~G~~~~~~~~~i~d 352 (517)
T 3r44_A 305 AAK----N---IEVVQGYALTESCGGGTLLLS-----------ED--------------ALRKAGSAGRATMFTDVAVRG 352 (517)
T ss_dssp HHT----T---CEEEEEEECGGGTTCEEEECG-----------GG--------------TTTTTTCCBEECTTEEEEEEC
T ss_pred Hhc----C---CcEEEeecccccccceeecCC-----------cc--------------ccccCCCCCcCCCCeEEEEEC
Confidence 653 2 689999999998654332110 00 011234699999999999999
Q ss_pred CCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCC
Q psy14338 1557 PETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVS 1636 (1761)
Q Consensus 1557 ~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G 1636 (1761)
++ ++++|.| .|||+|+|+++++|||| +|++|+++| .+|||||||+|++ |+| |
T Consensus 353 ~~-~~~~~~g-~GEl~v~g~~v~~GY~~---~p~~t~~~f---------~~g~~~TGDl~~~------~~d--------G 404 (517)
T 3r44_A 353 DD-GVIREHG-EGEVVIKSDILLKEYWN---RPEATRDAF---------DNGWFRTGDIGEI------DDE--------G 404 (517)
T ss_dssp TT-SCEESSE-EEEEEEEETTSCSEETT---CHHHHHHTE---------ETTEEEEEEEEEE------CTT--------S
T ss_pred CC-CCCCCCC-CeEEEEeCcchhhhhCC---ChhhhHhhh---------cCCCEecceeEEE------cCC--------e
Confidence 65 8999999 89999999999999999 999999999 4689999999999 999 9
Q ss_pred cccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHHHHHHH
Q psy14338 1637 KLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPLVTNAV 1711 (1761)
Q Consensus 1637 ~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~ 1711 (1761)
+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|...+...+.++|+++|+++
T Consensus 405 ~----l~~~GR~dd~ik~~G~~v~p~eIE~-~l~~~p~V~~~~Vv~~~~~~~g~~~~a~v~~~~~~~~~~~l~~~l~~~- 478 (517)
T 3r44_A 405 Y----LYIKDRLKDMIISGGENVYPAEIES-VIIGVPGVSEVAVIGLPDEKWGEIAAAIVVADQNEVSEQQIVEYCGTR- 478 (517)
T ss_dssp C----EEEEECGGGCEEETTEEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEECTTTCCHHHHHHHHHHH-
T ss_pred e----EEEecCCcCEEEECCEEECHHHHHH-HHHhCCCEeEEEEEeccccccCceEEEEEECCCCCCCHHHHHHHHHHh-
Confidence 9 9999999999999999999999999 8999999999999975 346777776566667788999999997
Q ss_pred hhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1712 LEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1712 Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
|| .||+|+.|++++ +||+|+||||||++|++.+.+
T Consensus 479 L~-~~~~P~~i~~v~--~lP~t~~GKi~R~~L~~~~~~ 513 (517)
T 3r44_A 479 LA-RYKLPKKVIFAE--AIPRNPTGKILKTVLREQYSA 513 (517)
T ss_dssp SC-GGGSCSEEEECS--CCCBCTTCCBCHHHHHHHHGG
T ss_pred CC-CCCCCCEEEEEC--CCCCCCCcCccHHHHHHHHHh
Confidence 98 999999999999 999999999999999999854
|
| >1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-69 Score=698.48 Aligned_cols=486 Identities=16% Similarity=0.169 Sum_probs=397.0
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++++.|.+++. ++||++|+... ..++++||+||+++++++|++|++. |+++||+|+|+++|++++++++||
T Consensus 3 tl~~~l~~~a~-----~~p~~~a~~~~---~~~~~~Ty~el~~~~~~~A~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~lA 73 (504)
T 1t5h_X 3 TVNEMLRRAAT-----RAPDHCALAVP---ARGLRLTHAELRARVEAVAARLHAD-GLRPQQRVAVVAPNSADVVIAILA 73 (504)
T ss_dssp CHHHHHHHHHH-----HCTTSEEEEET---TTTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSCHHHHHHHHH
T ss_pred cHHHHHHHHHH-----hCCCceEEEEc---CCCceeEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34555555554 77999999842 1268999999999999999999999 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEe--chhHHHHH-hhhccccccccccCCccccCCCCccchhh
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLS--NQNVIKLL-KSKEASNVVDIKSWPTILDTDDMPKKKLA 1320 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1320 (1761)
|+++|+++|||||.+|.+ ++.+++++++++++|+ +......+ .......++ .+.+.............
T Consensus 74 ~~~~G~~~vpl~~~~~~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 144 (504)
T 1t5h_X 74 LHRLGAVPALLNPRLKSA------ELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARII---FLGDLVRDGEPYSYGPP 144 (504)
T ss_dssp HHHHTCEEEEECTTSCHH------HHHHHHHHTTCSEEEECC--CHHHHHHHHCCCCEEE---EGGGTEETTEECCCSCC
T ss_pred HHHhCcEEEecCCccChH------HHHHHHhhcCCcEEEEecchhhhhhhhhccccceeE---EecchhhcCcccccCCc
Confidence 999999999999988877 9999999999999999 76655444 222111111 11121111000000000
Q ss_pred hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCc--CCCCeEEEEeCCccChhHHHHHHHHhhcCce
Q psy14338 1321 ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL--YPSRHIALCLDPYCGLGFALWVLSSVYSGHH 1398 (1761)
Q Consensus 1321 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~ 1398 (1761)
.......++++|||+|||||||+||||+++|+++.+.+.+....+++ .++++++..+|++|.+++...++.+|+.|++
T Consensus 145 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~ 224 (504)
T 1t5h_X 145 IEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGT 224 (504)
T ss_dssp CCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCE
T ss_pred cCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCce
Confidence 11134578999999999999999999999999999999998888888 8888999999999988876678999999999
Q ss_pred EEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHH
Q psy14338 1399 SILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSK 1478 (1761)
Q Consensus 1399 ~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~ 1478 (1761)
+++.+. +++..+++.|+++++|+++++|+++..|++.... .....++++||.+++|||++++ .+.++|.+
T Consensus 225 ~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~l~~lr~~~~gG~~l~~-~~~~~~~~ 294 (504)
T 1t5h_X 225 YVVVEE----FRPVDALQLVQQEQVTSLFATPTHLDALAAAAAH-----AGSSLKLDSLRHVTFAGATMPD-AVLETVHQ 294 (504)
T ss_dssp EEECSS----CCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCC-----TTCCCCCTTCCEEEECCTTCCH-HHHHHHHH
T ss_pred EEeCCC----CCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhcc-----ccccccCccccEEEEcCCcCCH-HHHHHHHH
Confidence 999874 7999999999999999999999999999774211 0234568999999999999999 88888887
Q ss_pred HHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCC
Q psy14338 1479 LFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPE 1558 (1761)
Q Consensus 1479 ~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~ 1558 (1761)
.++ ..+++.||+||+.. +.... . .+.+++|+|+++++++|+|++
T Consensus 295 ~~~------~~~~~~YG~TE~~~-~~~~~-------------~----------------~~~~~~g~p~~~~~~~i~~~~ 338 (504)
T 1t5h_X 295 HLP------GEKVNIYGTTEAMN-SLYMR-------------Q----------------PKTGTEMAPGFFSEVRIVRIG 338 (504)
T ss_dssp HCC------SEEEEEEEETTTEE-EEEEE-------------S----------------CSSSSEEBCCTTCCEEEECTT
T ss_pred hcC------cceeeeeccccccc-ccccc-------------C----------------CCCCccccCCCCCceeEEecc
Confidence 763 57899999999722 11100 0 012359999999999999966
Q ss_pred CC--CCCCCCcceEEEEc-CCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCC
Q psy14338 1559 TK--GQCGDSHLGEIWVQ-SPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGV 1635 (1761)
Q Consensus 1559 ~~--~~~p~G~~GEL~i~-g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~ 1635 (1761)
++ +++|.|+.|||+|+ |+++++|||| +|+.|+++| .+|||||||+|++ |+|
T Consensus 339 ~~~~~~~~~g~~GEl~v~gg~~~~~GY~~---~~~~t~~~f---------~~g~~~TGDlg~~------~~d-------- 392 (504)
T 1t5h_X 339 GGVDEIVANGEEGELIVAASDSAFVGYLN---QPQATAEKL---------QDGWYRTSDVAVW------TPE-------- 392 (504)
T ss_dssp SCTTCBCCTTCCEEEEEECCTTSCCCBTT---CHHHHHHHE---------ETTEEEEEEEEEE------CTT--------
T ss_pred CCCCCcCCCCCcceEEEeCCceeeceecC---Cchhhhhhh---------cCCccccCcEEEE------CCC--------
Confidence 32 89999999999999 9999999999 999999999 3689999999999 999
Q ss_pred CcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHH
Q psy14338 1636 SKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTN 1709 (1761)
Q Consensus 1636 G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~ 1709 (1761)
|+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++|+|+.. +...+.++++++|++
T Consensus 393 G~----l~~~GR~dd~ik~~G~~v~p~eIE~-~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~ 467 (504)
T 1t5h_X 393 GT----VRILGRVDDMIISGGENIHPSEIER-VLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRS 467 (504)
T ss_dssp SC----EEEEEEGGGCEEETTEEECHHHHHH-HHTTSTTEEEEEEEEEECSSSSEEEEEEEEECTTCCCCHHHHHHHHHT
T ss_pred ce----EEEeCcccCEEEECCEEECHHHHHH-HHHhCCCcceEEEEEeecCCCCcEEEEEEEecCCcCcCHHHHHHHHhh
Confidence 99 9999999999999999999999999 8999999999999975 34788998874 345677899999997
Q ss_pred -HHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1710 -AVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1710 -~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
+ || .||+|+.|++++ +||+|+||||||++|++.+.
T Consensus 468 ~~-L~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~ 503 (504)
T 1t5h_X 468 SE-LA-DFKRPKRYFILD--QLPKNALNKVLRRQLVQQVS 503 (504)
T ss_dssp SS-CC-GGGSCSEEEECS--CCCBCTTSCBCHHHHHHHHC
T ss_pred cc-Cc-ccccceEEEEhh--hCCCCCCCCEeHHHHHHHhc
Confidence 6 88 999999999999 99999999999999999873
|
| >3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-69 Score=707.04 Aligned_cols=492 Identities=15% Similarity=0.171 Sum_probs=383.6
Q ss_pred cccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHH
Q psy14338 1165 GYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 1244 (1761)
Q Consensus 1165 ~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~ 1244 (1761)
.++.|.+++. ++||++|+++++..+.++++||+||+++++++|++|++. |+++||+|+|+++|++++++++|||
T Consensus 58 ~~~~l~~~a~-----~~pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~~-Gv~~Gd~V~l~~~~~~e~~~~~lA~ 131 (580)
T 3etc_A 58 AYDVVDVYAR-----DSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKH-GIGKGDYVMLTLKSRYDFWYCMLGL 131 (580)
T ss_dssp HHHTHHHHHH-----HCTTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECTTCTHHHHHHHHH
T ss_pred HHHHHHHHHh-----hCCCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3455555554 679999999877655678999999999999999999999 9999999999999999999999999
Q ss_pred HHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH--HHHhhhcc------ccccccc-----cCCc---c
Q psy14338 1245 LYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI--KLLKSKEA------SNVVDIK-----SWPT---I 1308 (1761)
Q Consensus 1245 l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~--~~~~~~~~------~~~~~~~-----~~~~---~ 1308 (1761)
+|+|+++||++|.+|.+ ++.+++++++++++|++.+.. ..+..... ...+... .+.. .
T Consensus 132 ~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (580)
T 3etc_A 132 HKLGAIAVPATHMLKTR------DIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGDVLEGWIDFRKE 205 (580)
T ss_dssp HHHTCEEEECCTTCCHH------HHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSSCCTTCEEHHHH
T ss_pred HhCCEEEEeCCccCCHH------HHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCccccccccHHHH
Confidence 99999999999988777 999999999999999976532 22222110 0000000 0000 0
Q ss_pred ccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHH
Q psy14338 1309 LDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALW 1388 (1761)
Q Consensus 1309 ~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 1388 (1761)
+.... +....+.......++++|||+|||||||+||||+++|.++++.+......+++.++++++...++.|+.+....
T Consensus 206 ~~~~~-~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (580)
T 3etc_A 206 LEESS-PIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYTVADSGWGKCVWGK 284 (580)
T ss_dssp HHHSC-SCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEEECCCTTSTHHHHHT
T ss_pred HhhCC-cccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEEEeCChHHHHHHHHH
Confidence 00000 00000000124578999999999999999999999999999888887777889999999988888888887556
Q ss_pred HHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCC
Q psy14338 1389 VLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERP 1468 (1761)
Q Consensus 1389 ~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~ 1468 (1761)
++.+++.|+++++.+.. .+++..+++.|+++++|+++++|++++.|++. .....++++||.+++|||+++
T Consensus 285 ~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~--------~~~~~~l~~lr~i~~gGe~l~ 354 (580)
T 3etc_A 285 LYGQWIAGCAVFVYDYD--RFEAKNMLEKASKYGVTTFCAPPTIYRFLIKE--------DLSHYNFSTLKYAVVAGEPLN 354 (580)
T ss_dssp THHHHHTTCEEEEEECS--SCCHHHHHHHHHHHTCCEEEECHHHHHHHHTS--------CC---CCTTCCEEEECSSCCC
T ss_pred HHHHHhCCcEEEEecCC--CCCHHHHHHHHHHHCCeEEEccHHHHHHHHhc--------ccccCCCccceEEEEccCCCC
Confidence 78899999999988532 58999999999999999999999999999763 234567899999999999999
Q ss_pred hHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccC
Q psy14338 1469 RIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLP 1548 (1761)
Q Consensus 1469 ~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~ 1548 (1761)
+ ++.++|.+.++ ..+++.||+||++..+...... ..+.+++|+|++
T Consensus 355 ~-~~~~~~~~~~g------~~i~~~YG~TE~~~~~~~~~~~---------------------------~~~~~~~G~p~~ 400 (580)
T 3etc_A 355 P-EVFNRFLEFTG------IKLMEGFGQTETVVTIATFPWM---------------------------EPKPGSIGKPTP 400 (580)
T ss_dssp H-HHHHHHHHHHS------CCCEEEECCTTSSCCEECCTTS---------------------------CCCTTCCBEECT
T ss_pred H-HHHHHHHHHhC------CeEecccccccccceeecCCCC---------------------------CCCCCccccCCC
Confidence 9 88888888763 5799999999986654332110 011245999999
Q ss_pred CcEEEEEcCCCCCCCCCCcceEEEEcC-----CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCC
Q psy14338 1549 GVKVIIANPETKGQCGDSHLGEIWVQS-----PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSP 1623 (1761)
Q Consensus 1549 ~~~~~v~d~~~~~~~p~G~~GEL~i~g-----~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~ 1623 (1761)
|++++|+|++ +++||+|++|||+|+| +++++|||| +|+.|++.| .+|||||||+|++
T Consensus 401 ~~~v~ivd~~-g~~~~~g~~GEl~v~~~~g~~~~~~~gY~~---~p~~t~~~f---------~~gwy~TGDlg~~----- 462 (580)
T 3etc_A 401 GYKIELMDRD-GRLCEVGEEGEIVINTMEGKPVGLFVHYGK---DPERTEETW---------HDGYYHTGDMAWM----- 462 (580)
T ss_dssp TCEEEEECTT-SCBCCTTCCEEEEEECTTCCCTTCCCEETT---CHHHHHHHE---------ETTEEEEEEEEEE-----
T ss_pred CCEEEEECCC-CCCCCCCCceEEEEecCCCCCCeeeccccC---CHhHHHhhc---------CCCEEecCcEEEE-----
Confidence 9999999976 8999999999999997 789999999 999999999 3689999999999
Q ss_pred CCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC--
Q psy14338 1624 AGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN-- 1696 (1761)
Q Consensus 1624 ~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~-- 1696 (1761)
|+| |+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+....
T Consensus 463 -d~d--------G~----l~~~GR~dd~Ik~~G~~I~p~eIE~-~l~~~p~V~~a~Vvg~~~~~~g~~~~a~vv~~~~~~ 528 (580)
T 3etc_A 463 -DED--------GY----LWFVGRADDIIKTSGYKVGPFEVES-ALIQHPAVLECAITGVPDPVRGQVIKATIVLTKDYT 528 (580)
T ss_dssp -CTT--------SC----EEEEEESSSCEEETTEEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCC
T ss_pred -CCC--------Cc----EEEEecCCCEEEECCEEECHHHHHH-HHHhCCCeeeEEEEeeeccCCCcEEEEEEEECCCCC
Confidence 999 99 9999999999999999999999999 8999999999999974 3478888887432
Q ss_pred --chhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1697 --ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1697 --~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
....++|+++|+++ || .||+|+.|++++ +||+|+||||+|++|++++.+
T Consensus 529 ~~~~~~~~l~~~l~~~-l~-~~~~P~~i~~v~--~lP~t~sGKi~R~~Lr~~~~~ 579 (580)
T 3etc_A 529 PSDSLKNELQDHVKNV-TA-PYKYPRIIEFVP--ELPKTISGKIRRVEIRDKDQS 579 (580)
T ss_dssp CCHHHHHHHHHHHHHH-SC-GGGCCSEEEEEC--C--------------------
T ss_pred CCHHHHHHHHHHHHhh-CC-CccCCeEEEEeC--CCCCCCCcCCcHHHHHhHhhc
Confidence 23357899999987 88 999999999999 999999999999999998743
|
| >3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-70 Score=710.43 Aligned_cols=490 Identities=14% Similarity=0.191 Sum_probs=320.6
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
+.++++.|.+++. ++||++|++ ++++++||+||+++++++|++|++. |+++||+|+|+++|++++++++
T Consensus 29 ~~tl~~~l~~~a~-----~~p~~~Al~-----~~~~~~Ty~eL~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~ 97 (544)
T 3o83_A 29 DQPLTRILTVGVQ-----SHPHSLAII-----CGERQLSYIELDRLSTNLATRLAEK-GLGKGDTALVQLPNVAEFYIVF 97 (544)
T ss_dssp CCCTTHHHHHHHH-----HCTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEECCCSSHHHHHHH
T ss_pred CCCHHHHHHHHHH-----hCCCceEEE-----cCCCceeHHHHHHHHHHHHHHHHHC-CCCCCCEEEEECCCCHHHHHHH
Confidence 4567778877765 779999999 6789999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHH--------HHHhhhccc-c-cccccc------C
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI--------KLLKSKEAS-N-VVDIKS------W 1305 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~--------~~~~~~~~~-~-~~~~~~------~ 1305 (1761)
|||+++|+++||++|.+|.+ ++.+++++++++++|++.... ..+...... . .+.... +
T Consensus 98 lA~~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (544)
T 3o83_A 98 FALLKAGVVVLNALYSHRQY------ELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQATDFGL 171 (544)
T ss_dssp HHHHHHTCEEEECCTTCCHH------HHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCTTSEEH
T ss_pred HHHHHhCcEEecCCCCCCHH------HHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCccccch
Confidence 99999999999999988877 999999999999999987532 111111100 0 000000 0
Q ss_pred CccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhH
Q psy14338 1306 PTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGF 1385 (1761)
Q Consensus 1306 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1385 (1761)
....... . ..........++++|||+|||||||+||||+++|+++.+.+.+....+++.++|+++.++|++|.+++
T Consensus 172 ~~~~~~~---~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~ 247 (544)
T 3o83_A 172 LDWIETP---A-ETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFML 247 (544)
T ss_dssp HHHHHSC---C-SSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHH
T ss_pred hhhhhcc---c-ccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEeec
Confidence 0000000 0 00011134568999999999999999999999999999999999999999999999999999998887
Q ss_pred HH-HHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeec
Q psy14338 1386 AL-WVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVA 1464 (1761)
Q Consensus 1386 ~~-~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gG 1464 (1761)
.. .++.+|..|+++++.+. +++..+++.|+++++|+++++|+++..+++... ....++++||.+++||
T Consensus 248 ~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-------~~~~~~~~lr~i~~gG 316 (544)
T 3o83_A 248 SSPGALGVLHAGGCVVMAPN----PEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAA-------QYKDQIQSLKLLQVGG 316 (544)
T ss_dssp HSSHHHHHHHTTCEEEECSS----CCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHT-------TTHHHHTTCCEEEEES
T ss_pred chHHHHHHHHcCCEEEECCC----CCHHHHHHHHHHHCCCEEEechHHHHHHHhchh-------hccccCCcceEEEEcC
Confidence 65 58899999999999885 689999999999999999999999999987432 2234578999999999
Q ss_pred CCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccc
Q psy14338 1465 EERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESG 1544 (1761)
Q Consensus 1465 e~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 1544 (1761)
|++++ .+.+++.+.++ +.+++.||+||++..+..... .......++|
T Consensus 317 ~~l~~-~~~~~~~~~~~------~~~~~~YG~TE~~~~~~~~~~--------------------------~~~~~~~~~G 363 (544)
T 3o83_A 317 ASFPE-SLARQVPEVLN------CKLQQVFGMAEGLVNYTRLDD--------------------------SDEQIFTTQG 363 (544)
T ss_dssp SCCCH-HHHTHHHHHHC------SEEEEEEECTTSCEEECCTTS--------------------------CHHHHHHCCC
T ss_pred CCCCH-HHHHHHHHHhC------CcEEeeeccccccceeecCCC--------------------------chhhccCCCc
Confidence 99999 88888888773 689999999997653321100 0111235699
Q ss_pred ccc-CCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCC
Q psy14338 1545 KLL-PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSP 1623 (1761)
Q Consensus 1545 ~p~-~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~ 1623 (1761)
+|+ ++++++|+|+ +++++|.|++|||+|+|+++++|||| +|+.|+++| ..+|||||||+|++
T Consensus 364 ~p~~~~~~~~i~d~-~~~~~~~g~~GEl~v~g~~v~~GY~~---~~~~t~~~f--------~~~g~~~TGDlg~~----- 426 (544)
T 3o83_A 364 RPISSDDEIKIVDE-QYREVPEGEIGMLATRGPYTFCGYYQ---SPEHNSQVF--------DEDNYYYSGDLVQR----- 426 (544)
T ss_dssp EESCTTCEEEEECT-TSCBCCTTCCEEEEEECTTSCSCCTT---CHHHHHHHB--------CTTCCEEEEEEEEE-----
T ss_pred eecCCCcEEEEECC-CCCCCCCCCeeEEEEecCCcchhhcC---ChhhhhhhC--------CCCCCeEcCCEEEE-----
Confidence 997 8999999995 58999999999999999999999999 999999999 46799999999999
Q ss_pred CCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCch
Q psy14338 1624 AGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNES 1698 (1761)
Q Consensus 1624 ~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~ 1698 (1761)
|+| |+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+......
T Consensus 427 -~~d--------G~----l~~~GR~dd~ik~~G~~v~p~eIE~-~l~~~p~V~~a~vv~~~~~~~g~~~~a~vv~~~~~~ 492 (544)
T 3o83_A 427 -TPD--------GN----LRVVGRIKDQINRGGEKIASEEIEK-LILLHPEVMHAALVAIVDEQFGEKSCAFIVSRNPEL 492 (544)
T ss_dssp -CTT--------SC----EEEEEEEC------------------------------------------------------
T ss_pred -cCC--------CC----EEEEeecCCEEEeCCEEECHHHHHH-HHHhCCCccEEEEEeccCCCCCceEEEEEEeCCCCC
Confidence 999 99 9999999999999999999999999 8999999999999974 457888888766666
Q ss_pred hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1699 EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1699 ~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
+.+++++++++..|| .||+|+.|++++ +||+|+|||+||++|++++.+.
T Consensus 493 ~~~~l~~~~~~~~l~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~~~ 541 (544)
T 3o83_A 493 KAVVLRRHLMELGIA-QYKLPDQIKLIE--SLPLTAVGKVDKKQLRSILNTS 541 (544)
T ss_dssp ----------------------------------------------------
T ss_pred CHHHHHHHHHhCCCC-cccCCcEEEEec--cCCCCCCCCCcHHHHHHHHhhc
Confidence 778899999883488 999999999999 9999999999999999988654
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-69 Score=706.40 Aligned_cols=501 Identities=15% Similarity=0.236 Sum_probs=317.3
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
....++.+.|.+++. ++|+++|++.+.....++++||+||+++++++|++|++. |+++||+|+|+++|++++++
T Consensus 17 ~~~~tl~~~l~~~a~-----~~p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~ 90 (550)
T 3rix_A 17 LEDGTAGEQLHKAMK-----RYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRY-GLNTNHRIVVCSENSLQFFM 90 (550)
T ss_dssp CCCSCHHHHHHHHHH-----HHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEEECSSCTTTHH
T ss_pred cccCCHHHHHHHHHH-----hCCCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEcCCcccHHH
Confidence 345677788877765 679999976433324568999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-----cccccccCCc-------
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-----NVVDIKSWPT------- 1307 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~~------- 1307 (1761)
++|||+++|+++||++|.+|.+ ++.+++++++++++|++.+....+...... .++.......
T Consensus 91 ~~lA~~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (550)
T 3rix_A 91 PVLGALFIGVAVAPANDIYNER------ELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSM 164 (550)
T ss_dssp HHHHHHHHTCEEEECCTTCCHH------HHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTBCBH
T ss_pred HHHHHHHcCCEEeecCCcCCHH------HHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCCccccCcccH
Confidence 9999999999999999988877 999999999999999998876655433211 0000000000
Q ss_pred --cccCCCCccc--hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHH---cCcCCCCeEEEEeCCc
Q psy14338 1308 --ILDTDDMPKK--KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPY 1380 (1761)
Q Consensus 1308 --~~~~~~~~~~--~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~~~~~~~~ 1380 (1761)
.......... ....+.....++++|||+|||||||+||||+++|+++++.+.+.... +++.++++++.++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 244 (550)
T 3rix_A 165 YTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFH 244 (550)
T ss_dssp HHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTT
T ss_pred HHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHH
Confidence 0000000000 00001112245789999999999999999999999999988777655 5788889999999999
Q ss_pred cChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEE
Q psy14338 1381 CGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTC 1460 (1761)
Q Consensus 1381 ~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v 1460 (1761)
|.+++ +.++.+++.|+++++.+. +++..+++.|+++++|+++++|+++..+++.. .....++++||.+
T Consensus 245 ~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~l~~lr~i 312 (550)
T 3rix_A 245 HGFGM-FTTLGYLICGFRVVLMYR----FEEELFLRSLQDYKIQSALLVPTLFSFFAKST-------LIDKYDLSNLHEI 312 (550)
T ss_dssp SHHHH-HHHHHHHHHTCEEEECSS----CCHHHHHHHHHHTTCSEEEECHHHHHHHHHCC-------GGGGSCCTTCCEE
T ss_pred HHHHH-HHHHHHHHcCCEEEEeCC----CCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc-------cccccCcccccEE
Confidence 98887 568889999999999874 79999999999999999999999999997632 2345678999999
Q ss_pred EeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccce
Q psy14338 1461 VVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCL 1540 (1761)
Q Consensus 1461 ~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1540 (1761)
++|||++++ ++.++|.+.++. ..+++.||+||++..++..... ..+.
T Consensus 313 ~~gG~~l~~-~~~~~~~~~~~~-----~~v~~~YG~TE~~~~~~~~~~~---------------------------~~~~ 359 (550)
T 3rix_A 313 ASGGAPLSK-EVGEAVAKRFHL-----PGIRQGYGLTETTSAILITPEG---------------------------DDKP 359 (550)
T ss_dssp EECSSCCCH-HHHHHHHHHTTC-----SCCEEEEECGGGSSEEEECCTT---------------------------CCCT
T ss_pred EEecCCCCH-HHHHHHHHHcCC-----CccccccCcCccccceecCCCC---------------------------CCCC
Confidence 999999999 888888887642 3488999999987655432210 0123
Q ss_pred eccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEec
Q psy14338 1541 LESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRR 1620 (1761)
Q Consensus 1541 ~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~ 1620 (1761)
+++|+|+++++++|+|+++++++|.|++|||+|+|+++++|||| +|+.|++.| +.+|||||||+|++
T Consensus 360 ~~vG~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~---~~~~t~~~~--------~~~g~~~TGDl~~~-- 426 (550)
T 3rix_A 360 GAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGYVN---NPEATNALI--------DKDGWLHSGDIAYW-- 426 (550)
T ss_dssp TEEEEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETT---CHHHHHHHB--------CTTSCEEEEEEEEE--
T ss_pred CCcccccCCcEEEEEeCCCCcCCCCCCCeEEEEeCCCcchhhcC---Chhhhhhhc--------CCCCCeecCcEEEE--
Confidence 46999999999999998889999999999999999999999999 999999999 46799999999999
Q ss_pred cCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-
Q psy14338 1621 TSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD- 1694 (1761)
Q Consensus 1621 ~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~- 1694 (1761)
|+| |+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+..
T Consensus 427 ----~~d--------G~----l~~~GR~dd~ik~~G~~v~p~eIE~-~l~~~p~V~~a~vv~~~~~~~g~~~~a~vv~~~ 489 (550)
T 3rix_A 427 ----DED--------EH----FFIVDRLKSLIKYKGYQVAPAELES-ILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEH 489 (550)
T ss_dssp ----CTT--------CC----EEEC-------------------------------------------------------
T ss_pred ----eCC--------ce----EEEEecchheeEECCEEECHHHHHH-HHHhCCCcceEEEEEeecCCCCceEEEEEEecC
Confidence 999 99 9999999999999999999999999 8999999999999974 45678888764
Q ss_pred CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1695 GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1695 ~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
+...+.++++++++++ |++.+|+|..|++++ +||+|+||||||++|++++.+.
T Consensus 490 ~~~~~~~~l~~~~~~~-l~~~~~~~~~i~~v~--~lP~t~~GKi~r~~L~~~~~~~ 542 (550)
T 3rix_A 490 GKTMTEKEIVDYVASQ-VTTAKKLRGGVVFVD--EVPKGLTGKLDARKIREILIKA 542 (550)
T ss_dssp --------------------------------------------------------
T ss_pred CCCCCHHHHHHHHHHh-cccccccCCceEEEe--ecCCCCCcceeHHHHHHHHHhh
Confidence 4456778999999997 774557777899999 9999999999999999998554
|
| >1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-68 Score=705.68 Aligned_cols=497 Identities=18% Similarity=0.163 Sum_probs=399.8
Q ss_pred CCCCCCceEEccC-CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCC
Q psy14338 1180 GAPVPPGVSSVDT-RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258 (1761)
Q Consensus 1180 ~~P~~~Av~~~d~-~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~ 1258 (1761)
++||++|+++.+. ...++++||+||+++++++|+.|++. |+++||+|+|+++|++++++++|||+++|++++||+|.+
T Consensus 88 ~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~-Gv~~Gd~V~i~~~~~~e~vva~lA~~~~Gav~vpl~~~~ 166 (652)
T 1pg4_A 88 ENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDL-GIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGF 166 (652)
T ss_dssp HHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTS
T ss_pred cCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHHHHHHHHHcCcEEEecCCCC
Confidence 6799999996432 13468999999999999999999999 999999999999999999999999999999999999988
Q ss_pred CCCccCChHHHHHHHHhcCCeEEEechhHH---------HHHhhhcc-------ccccccccCCcccc--CC-CC-----
Q psy14338 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVI---------KLLKSKEA-------SNVVDIKSWPTILD--TD-DM----- 1314 (1761)
Q Consensus 1259 P~~~~~~~~rl~~il~~~~~~~vl~~~~~~---------~~~~~~~~-------~~~~~~~~~~~~~~--~~-~~----- 1314 (1761)
|.+ ++.+++++++++++|++.... ..+..... ..++.......... .. ..
T Consensus 167 ~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 240 (652)
T 1pg4_A 167 SPE------AVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDL 240 (652)
T ss_dssp CHH------HHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEEEHHHH
T ss_pred CHH------HHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCcccccCCCceeHHHH
Confidence 777 999999999999999976421 11111100 01111100000000 00 00
Q ss_pred -ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHH-HHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1315 -PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLC-RSMKLACELYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1315 -~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
.............+++++||+|||||||+||||+++|++++..+ ......+++.++|++++.++++|..+..+.++.+
T Consensus 241 ~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~~~~~ 320 (652)
T 1pg4_A 241 IEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGP 320 (652)
T ss_dssp HTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHH
T ss_pred HhhcCCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCCEEEEccCCeeeechHHHHHHH
Confidence 00000011223467999999999999999999999999988766 4556678999999999999999988887778999
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHL 1472 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l 1472 (1761)
|++|+++++.+.....+++..+++.|++++||+++++|++++.|++... ......++++||.+++|||++++ ++
T Consensus 321 L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-----~~~~~~~l~sLr~i~~gGe~l~~-~~ 394 (652)
T 1pg4_A 321 LACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGD-----KAIEGTDRSSLRILGSVGEPINP-EA 394 (652)
T ss_dssp HHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGG-----GGTTTCCCTTCCEEEEESSCCCH-HH
T ss_pred HHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCc-----cccccCCcCceEEEEEecCCCCH-HH
Confidence 9999999999853334689999999999999999999999999987421 11245678999999999999999 77
Q ss_pred HHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEE
Q psy14338 1473 TSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKV 1552 (1761)
Q Consensus 1473 ~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 1552 (1761)
.+++.+.+ |...+.+++.||+||++..++....... ..+.+++|+|++|+++
T Consensus 395 ~~~~~~~~---g~~~~~i~~~YG~TE~~~~~~~~~~~~~-------------------------~~~~~s~G~p~~g~~v 446 (652)
T 1pg4_A 395 WEWYWKKI---GKEKCPVVDTWWQTETGGFMITPLPGAI-------------------------ELKAGSATRPFFGVQP 446 (652)
T ss_dssp HHHHHHHT---TTTCSCEEEEBCCGGGSSCSBCCCTTTC-------------------------CBCTTCCBSBCTTCCE
T ss_pred HHHHHHHh---CCCCCcEEccccCcccccceecCCCCCc-------------------------CccCCccccCcCCCeE
Confidence 77777665 4445789999999998765443221000 0123469999999999
Q ss_pred EEEcCCCCCCCCCCcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCC
Q psy14338 1553 IIANPETKGQCGDSHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAP 1630 (1761)
Q Consensus 1553 ~v~d~~~~~~~p~G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~ 1630 (1761)
+|+|++ ++++|.|+.|||+|+| |++++|||| +|+.+.+.|.. ..+|||||||+|++ |+|
T Consensus 447 ~i~d~~-g~~v~~g~~GEl~i~g~~p~~~~gY~~---~~e~~~~~~~~------~~~g~y~TGDlg~~------d~d--- 507 (652)
T 1pg4_A 447 ALVDNE-GHPQEGATEGNLVITDSWPGQARTLFG---DHERFEQTYFS------TFKNMYFSGDGARR------DED--- 507 (652)
T ss_dssp EEECTT-CCBCCSSEEEEEEECSCCTTCCCEETT---CHHHHHHHHHS------SSTTSEEEEEEEEE------CTT---
T ss_pred EEECCC-CCCcCCCceEEEEEccCCCchhhhhcC---CHHHHHhhhhh------cCCCEEECCcEEEE------cCC---
Confidence 999965 8999999999999999 799999999 99999888742 23689999999999 999
Q ss_pred CCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC-ch---hHh
Q psy14338 1631 VPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN-ES---EAL 1701 (1761)
Q Consensus 1631 ~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~-~~---~~~ 1701 (1761)
|+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++|||++... .. ..+
T Consensus 508 -----G~----l~i~GR~dd~Ik~~G~rI~~~eIE~-~l~~~p~V~ea~Vvg~~~~~~g~~l~a~Vv~~~~~~~~~~~~~ 577 (652)
T 1pg4_A 508 -----GY----YWITGRVDDVLNVSGHRLGTAEIES-ALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYA 577 (652)
T ss_dssp -----SC----EEEEEESSSEEEETTEEEEHHHHHH-HHHHSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHH
T ss_pred -----Cc----EEEEecCCCEEEECCEEECHHHHHH-HHHhCCCcceEEEEEEEcCCCCeEEEEEEEECCCCCCCHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 3478999987532 22 257
Q ss_pred hHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1702 DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1702 ~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
+|+++|+++ |+ .||+|+.|++++ +||+|+||||+|++|++.+.+.
T Consensus 578 ~l~~~l~~~-l~-~~~~P~~i~~v~--~lP~T~sGKi~R~~L~~~~~~~ 622 (652)
T 1pg4_A 578 EVRNWVRKE-IG-PLATPDVLHWTD--SLPKTRSGKIMRRILRKIAAGD 622 (652)
T ss_dssp HHHHHHHHH-TC-GGGCCSEEEECS--CCCBCTTSCBCHHHHHHHHHTC
T ss_pred HHHHHHHHh-CC-CCcCCeEEEEcC--CCCCCCCccchHHHHHHHHhCC
Confidence 899999997 88 999999999999 9999999999999999998654
|
| >2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-69 Score=697.71 Aligned_cols=490 Identities=16% Similarity=0.225 Sum_probs=402.3
Q ss_pred cccc-ccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1164 TGYL-GFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1164 ~~~~-~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
++++ .+.+++. ++ +++|++.. ..++++||+||+++++++|+.|++. |+++||+|+|+++|++++++++|
T Consensus 26 ~l~~~~l~~~~~-----~~-~~~A~~~~---~~~~~~Ty~el~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~l 95 (548)
T 2d1s_A 26 GTQLRKYMERYA-----KL-GAIAFTNA---VTGVDYSYAEYLEKSCCLGKALQNY-GLVVDGRIALCSENCEEFFIPVI 95 (548)
T ss_dssp HHHHHHHHHHHH-----HH-TCEEEEET---TTCCEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEEECSSCTTTHHHHH
T ss_pred cHHHHHHHhhhc-----cc-CCceEEEc---CCCCEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCchhHHHHHH
Confidence 4555 5555543 67 99999832 1467999999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc-----cccccccc---------CCcc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA-----SNVVDIKS---------WPTI 1308 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~---------~~~~ 1308 (1761)
||+++|+++|||+|.+|.+ ++.+++++++++++|++......+..... ..++.... +..+
T Consensus 96 a~~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (548)
T 2d1s_A 96 AGLFIGVGVAPTNEIYTLR------ELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGYQCLDTF 169 (548)
T ss_dssp HHHHHTCEEEEECTTSCHH------HHHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCSSCBTTBCBHHHH
T ss_pred HHHhhCCEEeccCCCCCHH------HHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCcccccccccHHHH
Confidence 9999999999999988777 99999999999999999876555443211 11111110 0000
Q ss_pred ccCCCCccchhhhccCCCC-----C-CCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHH---cCcCCCCeEEEEeCC
Q psy14338 1309 LDTDDMPKKKLAALYRAPT-----A-EMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDP 1379 (1761)
Q Consensus 1309 ~~~~~~~~~~~~~~~~~~~-----~-~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~~~~~~~ 1379 (1761)
....... ........ + ++++||+|||||||+||||+++|+++.+.+.+.... +++.++|+++.++|+
T Consensus 170 ~~~~~~~----~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~ 245 (548)
T 2d1s_A 170 IKRNTPP----GFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPF 245 (548)
T ss_dssp HHHTSCT----TCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCT
T ss_pred HhcCccc----cCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccH
Confidence 0000000 00001112 4 899999999999999999999999999998887766 788889999999999
Q ss_pred ccChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceE
Q psy14338 1380 YCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRT 1459 (1761)
Q Consensus 1380 ~~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~ 1459 (1761)
+|.+++...++.++ .|+++++.+. +++..+++.|+++++|+++++|+++..|++.. .....++++||.
T Consensus 246 ~h~~g~~~~~~~~l-~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~l~~lr~ 313 (548)
T 2d1s_A 246 HHGFGMFTTLGYLI-CGFRVVMLTK----FDEETFLKTLQDYKCTSVILVPTLFAILNKSE-------LLNKYDLSNLVE 313 (548)
T ss_dssp TSHHHHHHHHHHHH-TTCEEEECCC----CCHHHHHHHHHHTTEEEEEECHHHHHHHHHCS-------CGGGSCCTTCCE
T ss_pred HHHHHHHHHHHHHh-cCcEEEEcCC----CCHHHHHHHHHHcCCcEEEecHHHHHHHHhCc-------ccccccccceeE
Confidence 88888754466777 9999999874 79999999999999999999999999997631 123457889999
Q ss_pred EEeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccc
Q psy14338 1460 CVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLC 1539 (1761)
Q Consensus 1460 v~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1539 (1761)
+++|||++++ .+.++|.+.++. ..+++.||+||++.+++..... ..+
T Consensus 314 i~~gG~~l~~-~~~~~~~~~~~~-----~~i~~~YG~TE~~~~~~~~~~~---------------------------~~~ 360 (548)
T 2d1s_A 314 IASGGAPLSK-EVGEAVARRFNL-----PGVRQGYGLTETTSAIIITPEG---------------------------DDK 360 (548)
T ss_dssp EEECSSCCCH-HHHHHHHHHTTC-----SCCEEEEECGGGSSEEEECCTT---------------------------CCC
T ss_pred EEEcCccCCH-HHHHHHHHHcCC-----CceeeccccccccceeeecCcc---------------------------cCC
Confidence 9999999999 888888888742 5799999999987655432110 012
Q ss_pred eeccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEe
Q psy14338 1540 LLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLR 1619 (1761)
Q Consensus 1540 ~~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~ 1619 (1761)
.+++|+|+++++++|+|+++++++|.|++|||+|+|+++++|||| +|+.|++.| ..+|||||||+|++
T Consensus 361 ~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~---~~~~t~~~f--------~~~g~~~TGDl~~~- 428 (548)
T 2d1s_A 361 PGASGKVVPLFKAKVIDLDTKKSLGPNRRGEVCVKGPMLMKGYVN---NPEATKELI--------DEEGWLHTGDIGYY- 428 (548)
T ss_dssp TTCCBEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETT---CHHHHHHHB--------CTTSCEEEEEEEEE-
T ss_pred CCCCCccCCCceEEEEeCCcCccCCCCCCeEEEECCHHHhhhhcC---ChHHhhhcc--------cCCcEEEccCEEEE-
Confidence 345999999999999997779999999999999999999999999 999999999 35789999999999
Q ss_pred ccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC
Q psy14338 1620 RTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD 1694 (1761)
Q Consensus 1620 ~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~ 1694 (1761)
|+| |+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+..
T Consensus 429 -----~~d--------G~----l~~~GR~~d~ik~~G~~v~p~eIE~-~l~~~p~V~~a~V~~~~~~~~g~~~~a~vv~~ 490 (548)
T 2d1s_A 429 -----DEE--------KH----FFIVDRLKSLIKYKGYQVPPAELES-VLLQHPSIFDAGVAGVPDPVAGELPGAVVVLE 490 (548)
T ss_dssp -----CTT--------CC----EEEEEEGGGCBCBTTCCBCHHHHHH-HHHTSTTEEEEEEEEEEETTTEEEEEEEEEEC
T ss_pred -----cCC--------Ce----EEEeccccceEEECCEEECHHHHHH-HHHhCCCccEEEEEEEEcCCCCeeeEEEEEEc
Confidence 999 99 9999999999999999999999999 8999999999999975 34788888874
Q ss_pred -CCchhHhhHHHHHHHHHhhhcCceee-EEEEECCCCccCCCchhhhHHHHHHHHHcCCCC
Q psy14338 1695 -GNESEALDLVPLVTNAVLEEHHLIVG-VAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 1753 (1761)
Q Consensus 1695 -~~~~~~~~l~~~l~~~~Lp~~~~vP~-~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~~ 1753 (1761)
+...+.++|+++|+++ |+ .||+|. .|++++ +||+|+|||+||++|++.+. ..++
T Consensus 491 ~~~~~~~~~l~~~~~~~-l~-~~~~p~~~i~~v~--~lP~t~~GKi~r~~L~~~~~-~~i~ 546 (548)
T 2d1s_A 491 SGKNMTEKEVMDYVASQ-VS-NAKRLRGGVRFVD--EVPKGLTGKIDGRAIREILK-KPVA 546 (548)
T ss_dssp TTCCCCHHHHHHHHHTT-SC-GGGSCTTCEEECS--SCCBCTTSCBCHHHHHHHHH-SCC-
T ss_pred CCCCCCHHHHHHHHHHh-cc-ccccccccEEEcc--CCCCCCcchhHHHHHHHHHh-hhhh
Confidence 3456778999999987 88 999999 999999 99999999999999999884 4443
|
| >3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-69 Score=709.28 Aligned_cols=497 Identities=15% Similarity=0.149 Sum_probs=314.1
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCC----CceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCC
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPN----GKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNN 155 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~----g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s 155 (1761)
..++.++|+++|+++||++|+++.++. +...+++||+||+++++++|+.|+ +.|+ +||+|+|+++|+
T Consensus 19 ~~tl~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~--------~~g~-~gd~V~i~~~n~ 89 (562)
T 3ite_A 19 TVPPSHYIETWAKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLII--------HASL-HGRAIAVSLDRS 89 (562)
T ss_dssp CCCTTHHHHHHHHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHH--------HTTC-SSCEEEEECCSC
T ss_pred cCCHHHHHHHHHHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHH--------hcCC-CCCEEEEEeCCC
Confidence 467899999999999999999976521 112268999999999999999999 8889 799999999999
Q ss_pred CchhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEe
Q psy14338 156 DPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVT 235 (1761)
Q Consensus 156 ~~~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (1761)
+++++++|||+|+|+++|||||.++.+ |+.+++++++++++|+++.....+.......++.... ..+ .
T Consensus 90 --~~~~~~~lA~~~~Gav~vpl~~~~~~~-----~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~--~ 157 (562)
T 3ite_A 90 --LIAFAIIVGIMKSGNTYVPIEAGLPND-----RKSFLLRDSRAAMAFVCDNNFDGVELPPETKVLDTKN---QSF--I 157 (562)
T ss_dssp --HHHHHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECTTTTTTCCCCTTCEEEETTC---HHH--H
T ss_pred --HHHHHHHHHHHHhCCEEEecCCcCHHH-----HHHHHHHhcCCCEEEEccccccccccCccceeecccc---hhh--h
Confidence 999999999999999999999999976 9999999999999999876544332111111111000 000 0
Q ss_pred ccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHH--------cCCCCCCeEEEccCCcch
Q psy14338 236 EHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQA--------CHYTEGENMVCVLDFKRE 307 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~--------~~~~~~d~~l~~~~~~~~ 307 (1761)
+...... .........++++|||+|||||||+||||+++|+++.+.+.++... +.+...+++++++|++|+
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (562)
T 3ite_A 158 ENLSTQD-TSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFD 236 (562)
T ss_dssp HHHHHSC-CSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTST
T ss_pred hhccccc-ccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhh
Confidence 0011111 1112234567899999999999999999999999999888766543 457888999999999999
Q ss_pred hhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCcc
Q psy14338 308 TGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANP 387 (1761)
Q Consensus 308 ~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~ 387 (1761)
.++.. ++.++..|+++++.+. ...+..+.+.++++++|++.++| +++..+... +.++++||.+++| |++
T Consensus 237 ~~~~~-~~~~l~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P-~~l~~~~~~----~~~~~~lr~~~~g--G~~ 305 (562)
T 3ite_A 237 VHIGE-MFLAWRFGLCAVTGER---LSMLDDLPRTFRELGVTHAGIVP-SLLDQTGLV----PEDAPHLVYLGVG--GEK 305 (562)
T ss_dssp HHHHH-HHHHHHTTCEEEECCH---HHHHHSHHHHHHHTTCCEEEECH-HHHHHHTCC----GGGSTTCCEEEEE--SSC
T ss_pred hhHHH-HHHHHhcccEEEecch---hhCHHHHHHHHHHcCCCEEEcCH-HHHhhcccC----ccccCceEEEEEe--cCC
Confidence 99985 9999999999999873 23467789999999999999996 466655332 3467899999999 999
Q ss_pred CCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccC
Q psy14338 388 WSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCG 467 (1761)
Q Consensus 388 l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG 467 (1761)
+++++.++|.+.+ |+ .++|.||+||+++.++..... ......++|
T Consensus 306 l~~~~~~~~~~~~---~~---~~~~~YG~TE~~~~~~~~~~~-----------------------------~~~~~~~~G 350 (562)
T 3ite_A 306 MTPRTQQIWSSSD---RV---ALVNVYGPTEVTIGCSAGRIL-----------------------------PDSDTRCIG 350 (562)
T ss_dssp CCHHHHHHHTTCS---SC---EEEEEECCGGGCSCSEEEECC-----------------------------TTSCTTEEE
T ss_pred CCHHHHHHHhhCC---Cc---EEEEeeccchheeeeeeeeec-----------------------------CCCCCcccc
Confidence 9999999998765 44 399999999998655543211 012356899
Q ss_pred CCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 468 QVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 468 ~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
+|+++++++|+|+++.. ++|.|++|||+|+|+++++||||+|+.|+..|. ++++||||||+|++|+||
T Consensus 351 ~p~~~~~~~i~d~~~~~-~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~-----------~g~~w~~TGDlg~~d~dG 418 (562)
T 3ite_A 351 HPLGDSVAHVLAPGSNE-HVKKGMAGELVIEGSLVANGYLNRPDAKGFCDI-----------NGRKMYRTGDIVRMDADS 418 (562)
T ss_dssp EECTTCEEEEECTTSSC-BCCTTSCEEEEEESTTSCCEESSCTTCCSEEEE-----------TTEEEEEEEEEEEECTTS
T ss_pred ccCCCCeEEEEeCCCCC-CCCCCCceEEEEeccccchhhCCCccccccccC-----------CCCEEEecCCEEEEcCCC
Confidence 99999999999986553 699999999999999999999999999987764 236799999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceE-EEEEEeCCC-C------------
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERI-CVIAEQRPD-C------------ 612 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l-~a~v~~~~~-~------------ 612 (1761)
+|+|+||+|||||++|+||+|.|||++|.++++++ .+++|++.+++ .++.. ++++..... .
T Consensus 419 ~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~~----~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 494 (562)
T 3ite_A 419 SILFLGRKDEQVKVRGQRLELGEVSEVIRSLSPTD----IDVVTLLLNHPGTSKQFLVSFVASSGAAVRGELRWINENYK 494 (562)
T ss_dssp CEEEEEEC------------------------------------------------------------------------
T ss_pred eEEEEccccCEEeECcEEECHHHHHHHHHhcCCCc----eeEEEEEecCCCCcceEEEEEEecccccccccccccccchh
Confidence 99999999999999999999999999999987775 67888777643 44444 444433221 1
Q ss_pred -CHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCC-CCCcccHHHHHHHHHcC
Q psy14338 613 -SEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKT-PLGGIHLSECKRRFLEG 667 (1761)
Q Consensus 613 -~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t-~~GKidR~~L~~~~~~~ 667 (1761)
..++|+++|+++||.||+|+.| +.+++||+| +|||+||++|++++.+.
T Consensus 495 ~~~~~l~~~~~~~L~~y~~P~~i-------~~v~~lP~t~~~GKi~r~~L~~~~~~~ 544 (562)
T 3ite_A 495 EINNSLRQACEQTLPAYMVPDFI-------IPISFIPLRDTSAKTDAKALEHMFHTL 544 (562)
T ss_dssp ---------------------------------------------------------
T ss_pred hHHHHHHHHHHhhCCcccCCcEE-------EEeccCCCCCCCCcchHHHHHHHHhcc
Confidence 1348999999999999999986 567999998 89999999999988653
|
| >3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-68 Score=691.11 Aligned_cols=498 Identities=15% Similarity=0.147 Sum_probs=401.5
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++++.|.+++...+|+++||++|+++.+..+.++++||+||+++++++|++|++.+|+++||+|+|+++|++++++++||
T Consensus 39 ~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~~~~lA 118 (570)
T 3c5e_A 39 FASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILG 118 (570)
T ss_dssp HHHHTHHHHHHHHHTTSSCCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccCCCCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34455555554222334899999997654223589999999999999999999865899999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc-c----cccccc--CCccccCCCC-c
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS-N----VVDIKS--WPTILDTDDM-P 1315 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-~----~~~~~~--~~~~~~~~~~-~ 1315 (1761)
|+++|+++|||+|.+|.+ ++.+++++++++++|++......+...... . ++.... .......... .
T Consensus 119 ~~~~Ga~~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (570)
T 3c5e_A 119 CIRAGLIFMPGTIQMKST------DILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLN 192 (570)
T ss_dssp HHHHTCEEEECCTTCCHH------HHHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSSCCTTSEEHHHHHH
T ss_pred HHHcCeEEEecCCCCCHH------HHHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEecccCccccccHHHHhh
Confidence 999999999999988777 999999999999999998776655432111 0 000000 0000000000 0
Q ss_pred cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHH-HHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhh
Q psy14338 1316 KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTS-LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVY 1394 (1761)
Q Consensus 1316 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~ 1394 (1761)
............++++|||+|||||||+||||+++|+.+.+ ..... ..+++.++|+++..+|++|..++...++.+|.
T Consensus 193 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~ 271 (570)
T 3c5e_A 193 EASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDA-GWTGLQASDIMWTISDTGWILNILCSLMEPWA 271 (570)
T ss_dssp HSCSCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHT-TTTSCCTTCEEEECCCTTSHHHHHHTTHHHHH
T ss_pred cccccccccCCCCCCcEEEEECCCCCCCCCEEEechHHHHhhhhhhh-hhcCCCCCceEEEcCchHHHHHHHHHHHHHHH
Confidence 00000111345689999999999999999999999994432 44444 67888999999999999998888667899999
Q ss_pred cCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHH
Q psy14338 1395 SGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTS 1474 (1761)
Q Consensus 1395 ~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~ 1474 (1761)
.|+++++.+.. .+++..+++.|+++++|+++++|++++.+++. .....++++||.+++|||++++ .+.+
T Consensus 272 ~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------~~~~~~~~~lr~i~~gGe~l~~-~~~~ 340 (570)
T 3c5e_A 272 LGACTFVHLLP--KFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQ--------DLSSYKFPHLQNCVTVGESLLP-ETLE 340 (570)
T ss_dssp HTCEEEEECCS--SCCHHHHHHHHHHSCCCEEEECHHHHHHHHTS--------CTTTCCCTTCCEEEEESSCCCH-HHHH
T ss_pred hCceEEEecCC--CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhc--------cccccccccceEEEEcCCcCCH-HHHH
Confidence 99999998743 47999999999999999999999999999763 1234568899999999999999 7888
Q ss_pred HHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEE
Q psy14338 1475 AFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVII 1554 (1761)
Q Consensus 1475 ~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v 1554 (1761)
+|.+.++ ..+++.||+||++.+++..... ..+.+++|+|++|++++|
T Consensus 341 ~~~~~~g------~~i~~~YG~TE~~~~~~~~~~~---------------------------~~~~~~vG~p~~~~~v~i 387 (570)
T 3c5e_A 341 NWRAQTG------LDIRESYGQTETGLTCMVSKTM---------------------------KIKPGYMGTAASCYDVQI 387 (570)
T ss_dssp HHHHHHS------CCCEEEEEETTTEEEEECCTTS---------------------------CCCTTCCCEECTTCCEEE
T ss_pred HHHHHhC------CchhhccchhhcccceecCccc---------------------------ccCCCcccccCCCceEEE
Confidence 8887763 5799999999988665432110 011245999999999999
Q ss_pred EcCCCCCCCCCCcceEEEEc-----CCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1555 ANPETKGQCGDSHLGEIWVQ-----SPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1555 ~d~~~~~~~p~G~~GEL~i~-----g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
+|++ ++++|.|++|||+|+ |+++++|||| +|+.|+++|. +|||+|||+|++ |+|
T Consensus 388 ~d~~-g~~~~~G~~GEl~v~~~~~~g~~v~~GY~~---~~~~t~~~f~---------~~~~~TGDlg~~------d~d-- 446 (570)
T 3c5e_A 388 IDDK-GNVLPPGTEGDIGIRVKPIRPIGIFSGYVD---NPDKTAANIR---------GDFWLLGDRGIK------DED-- 446 (570)
T ss_dssp ECTT-SCBCCTTCCEEEEEECSSBCCTTCCCEETT---CHHHHHHTEE---------TTEEEEEEEEEE------CTT--
T ss_pred ECCC-CCCCCCCCCCeeEEeccCCCCchhhccccC---ChhHhhhhhc---------CCccccceeEEE------cCC--
Confidence 9965 899999999999999 9999999999 9999999992 689999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc------h
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE------S 1698 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~------~ 1698 (1761)
|+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+..... .
T Consensus 447 ------G~----l~~~GR~dd~Ik~~G~~V~p~eIE~-~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~~ 515 (570)
T 3c5e_A 447 ------GY----FQFMGRADDIINSSGYRIGPSEVEN-ALMEHPAVVETAVISSPDPVRGEVVKAFVVLASQFLSHDPEQ 515 (570)
T ss_dssp ------SC----EEEEEEGGGCEEETTEEECHHHHHH-HHHTSTTEEEEEEEEEEETTTEEEEEEEEEECGGGTTSCHHH
T ss_pred ------ce----EEEEecCCCEEEECCEEECHHHHHH-HHHhCCCcceEEEEeeeCCCCCeEEEEEEEECCcccCcchHH
Confidence 99 9999999999999999999999999 8999999999999975 34788888874321 2
Q ss_pred hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1699 EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1699 ~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
..++|+++|+++ || .||+|+.|++++ +||+|+|||+||++|++.+.
T Consensus 516 ~~~~l~~~l~~~-L~-~~~~P~~i~~v~--~lP~t~~GKi~R~~L~~~~~ 561 (570)
T 3c5e_A 516 LTKELQQHVKSV-TA-PYKYPRKIEFVL--NLPKTVTGKIQRAKLRDKEW 561 (570)
T ss_dssp HHHHHHHHHHHH-SC-GGGSCSEEEEES--CCCBCTTCCBCHHHHHHHHT
T ss_pred HHHHHHHHHHhh-Cc-cccCCcEEEEec--cCCCCCCcCCcHHHHHHHHH
Confidence 357899999986 88 999999999999 99999999999999999874
|
| >3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-69 Score=694.52 Aligned_cols=482 Identities=16% Similarity=0.170 Sum_probs=313.0
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
+.++++.|.+++. ++||++|++ ++++++||+||+++++++|++|++. |+++||+|+|+++|++++++++
T Consensus 5 ~~tl~~~l~~~a~-----~~pd~~Al~-----~~~~~~Ty~eL~~~~~~lA~~L~~~-Gv~~gd~V~i~~~~~~~~~~~~ 73 (509)
T 3ivr_A 5 DFTLADVYRRNAA-----LFPDRTAFM-----VDGVRLTHRDYLARAERLASGLLRD-GVHTGDRVAILSQNCSEMIELI 73 (509)
T ss_dssp CCCHHHHHHHHHH-----HSTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSCHHHHHHH
T ss_pred cCCHHHHHHHHHH-----HCCCceEEE-----ECCcEEcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHH
Confidence 3567777777765 779999999 6789999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc-cc----ccccc----cCCccccCC
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA-SN----VVDIK----SWPTILDTD 1312 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-~~----~~~~~----~~~~~~~~~ 1312 (1761)
|||+++|+++|||||.+|.+ ++.+++++++++++|++......+..... .. .+... .+.......
T Consensus 74 lA~~~~Ga~~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (509)
T 3ivr_A 74 GAVALIGAILLPVNYRLNAD------EIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDGSGPFAPFKDLA 147 (509)
T ss_dssp HHHHHTTCEEEECCTTSCHH------HHHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSCCCSSCEEGGGTC
T ss_pred HHHHHhCCEEEecCCCCCHH------HHHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCCCCcChhhHhhcc
Confidence 99999999999999988887 99999999999999999887655322211 00 00000 011111000
Q ss_pred CCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1313 DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1313 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
...........+++++||+|||||||.||||+++|+++.+.+.+....+++.++|+++..+|++|.+++ ...+.+
T Consensus 148 ----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~ 222 (509)
T 3ivr_A 148 ----SDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGL-GLMLTL 222 (509)
T ss_dssp ----CCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHH-HHHHHH
T ss_pred ----CCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHH-HHHHHH
Confidence 001112245678999999999999999999999999999999999999999999999999999888887 445666
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHL 1472 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l 1472 (1761)
++.|+++++.. .+++..+++.|+++++|+++++|+++..+++.. ...++++||.++.||++ .+
T Consensus 223 ~~~~g~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~---------~~~~l~~lr~~~~~g~~----~~ 285 (509)
T 3ivr_A 223 QQAGGASVIAA----KFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA---------APAQLASLRAVTGLDTP----ET 285 (509)
T ss_dssp HHHTCEEEECS----SCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC---------CGGGGTTCCEEEEECCH----HH
T ss_pred HHhCCcEEEec----ccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc---------cccchhhhheecccCCh----HH
Confidence 66677777665 379999999999999999999999999998742 34567899999999987 56
Q ss_pred HHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEE
Q psy14338 1473 TSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKV 1552 (1761)
Q Consensus 1473 ~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 1552 (1761)
.+++.+.++. ..+++.||+||++.+++.... . .. ..++|+|++|+++
T Consensus 286 ~~~~~~~~~~-----~~~~~~YG~TE~~~~~~~~~~-----------~------------~~-----~~~~G~p~~~~~~ 332 (509)
T 3ivr_A 286 IERFEATCPN-----ATFWATFGQSETSGLSTFAPY-----------R------------DR-----PKSAGRPLFWRTV 332 (509)
T ss_dssp HHHHHHHCTT-----CEEEEEEEEGGGTEEEEEEEG-----------G------------GS-----TTSCCEECTTCEE
T ss_pred HHHHHHhcCC-----CeEEcccCccccccccccCcc-----------c------------cC-----CCcccccCCCcEE
Confidence 6777776632 689999999998775532110 0 00 1238999999999
Q ss_pred EEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCC
Q psy14338 1553 IIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVP 1632 (1761)
Q Consensus 1553 ~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~ 1632 (1761)
+|+|++ ++++|.|++|||+|+|+++++|||| +|+.|+++| .+|||||||+|++ |+|
T Consensus 333 ~i~d~~-~~~~~~g~~GEl~v~g~~~~~gY~~---~~~~t~~~f---------~~g~~~TGDl~~~------~~d----- 388 (509)
T 3ivr_A 333 AVVDAE-DRPLPPGEVGEIVLRGPTVFKGYWN---NAAATQHAF---------RNGWHHTGDMGRF------DAD----- 388 (509)
T ss_dssp EEECTT-SCBCCTTCCEEEEEESTTSCCEETT---CHHHHHHHT---------GGGSEEEEEEEEE------CTT-----
T ss_pred EEECCC-CCCCCCCCceEEEEecCCccccccC---CHHHhHHHh---------hcCCcccccEEEE------CCC-----
Confidence 999966 8999999999999999999999999 999999999 3689999999999 999
Q ss_pred CCCCcccceEEEEccc--CCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHH
Q psy14338 1633 PGVSKLHDAVFVVGAL--DETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLV 1704 (1761)
Q Consensus 1633 ~g~G~~~~~l~~~GR~--dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~ 1704 (1761)
|+ ++|+||+ ||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+.. +...+.++|+
T Consensus 389 ---G~----l~~~GR~d~~d~ik~~G~~v~p~eiE~-~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~l~ 460 (509)
T 3ivr_A 389 ---GY----LFYAGRAPEKELIKTGGENVYPAEVEG-ALKQHPAIADAVVIGVPDPQWSEAIKAVCVCKPGESIAADALA 460 (509)
T ss_dssp ---SC----EEEEEEC----------------------------------------------------------------
T ss_pred ---ce----EEEeCCCCcceeEEECCEEECHHHHHH-HHHhCCCceeEEEEeccccccCcEEEEEEEeCCCCCCCHHHHH
Confidence 99 9999999 999999999999999999 8999999999999974 44678888764 4456778999
Q ss_pred HHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1705 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1705 ~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
++|+++ || .||+|+.|++++ +||+|+||||||++|++.+.+..
T Consensus 461 ~~l~~~-L~-~~~~P~~i~~v~--~lP~t~~GKidr~~Lr~~~~~~~ 503 (509)
T 3ivr_A 461 EFVASL-IA-RYKKPKHVVFVE--ALPKDAKGAIDRAAVKTAHGQEG 503 (509)
T ss_dssp -----------------------------------------------
T ss_pred HHHHhh-Cc-ccCCCcEEEEec--CCCCCCCCCccHHHHHHHHhhcc
Confidence 999997 88 999999999999 99999999999999999886543
|
| >3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-68 Score=686.50 Aligned_cols=491 Identities=15% Similarity=0.204 Sum_probs=401.5
Q ss_pred ccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q psy14338 1166 YLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCL 1245 (1761)
Q Consensus 1166 ~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l 1245 (1761)
.+.|.+++ +++|+++|++ ++++++||+||+++++++|++|.+..|+++|++|+++++|++++++++|||+
T Consensus 4 ~~~l~~~a-----~~~p~~~Al~-----~~~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~ 73 (511)
T 3e7w_A 4 LHAIQTHA-----ETYPQTDAFR-----SQGQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSV 73 (511)
T ss_dssp HHHHHHHH-----HHSTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHH
T ss_pred HHHHHHHH-----HHCCCCeEEE-----cCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHH
Confidence 34444454 4789999999 6789999999999999999999885478999999999999999999999999
Q ss_pred HcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCC
Q psy14338 1246 YVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRA 1325 (1761)
Q Consensus 1246 ~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1325 (1761)
++|+++|||+|.+|.+ ++.+++++++++++|++...... ... ..+....+..+....... ......
T Consensus 74 ~~G~~~vpl~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~----~~~~~~ 139 (511)
T 3e7w_A 74 KAGHPYIPVDLSIPSE------RIAKIIESSGAELLIHAAGLSID--AVG--QQIQTVSAEELLENEGGS----VSQDQW 139 (511)
T ss_dssp HHTCCEEEEETTSCHH------HHHHHHHHHTCCEEEESSSCCTT--CCC--CSSCEEEHHHHHTSCSCC----CCGGGS
T ss_pred HhCCEEEecCCCChHH------HHHHHHHhCCCCEEEecccccch--hcc--cccceecHhhhhccccCC----cccccc
Confidence 9999999999988777 99999999999999996542110 000 000000111111111100 111234
Q ss_pred CCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCC
Q psy14338 1326 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 1405 (1761)
Q Consensus 1326 ~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~ 1405 (1761)
..+++++||+|||||||.||||+++|+++.+.+.+....+++.++|+++.++|++|+.++ ..++.+|+.|+++++.+..
T Consensus 140 ~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~ 218 (511)
T 3e7w_A 140 VKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSV-MDLYPCLQSGGTLHCVTKD 218 (511)
T ss_dssp CCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHH-HHHHHHHHTTCEEEECCHH
T ss_pred CCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHH-HHHHHHHhcCCEEEEcChh
Confidence 568899999999999999999999999999999999999999999999999999888886 6789999999999998752
Q ss_pred ccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCC
Q psy14338 1406 EVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGL 1485 (1761)
Q Consensus 1406 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~ 1485 (1761)
..+++..+++.|+++++|+++++|+++..+++. .......++++|.+++|||++++ .+.+++.+.|+.
T Consensus 219 -~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------~~~~~~~~~~l~~~~~~G~~l~~-~~~~~~~~~~~~--- 286 (511)
T 3e7w_A 219 -AVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMD-------PGFSQDLLPHADTFMFCGEVLPV-SVAKALLERFPK--- 286 (511)
T ss_dssp -HHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTS-------TTCSTTTCTTCCEEEECSSCCCH-HHHHHHHHHCTT---
T ss_pred -hhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhc-------cccccccCCcccEEEEecCCCCH-HHHHHHHHHCCC---
Confidence 236899999999999999999999999998763 22345678899999999999999 888888887743
Q ss_pred CCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCC
Q psy14338 1486 SPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGD 1565 (1761)
Q Consensus 1486 ~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~ 1565 (1761)
..+++.||+||++..++... ...... ......++|+|++|++++|+|++ ++++|.
T Consensus 287 --~~i~~~YG~TE~~~~~~~~~---------~~~~~~-------------~~~~~~~~G~~~~~~~~~i~d~~-g~~~~~ 341 (511)
T 3e7w_A 287 --AKIFNTYGPTEATVAVTSVE---------ITNDVI-------------SRSESLPVGFAKPDMNIFIMDEE-GQPLPE 341 (511)
T ss_dssp --CEEEECCCCGGGSSCSEEEE---------ECHHHH-------------TTCSSCCCBEECTTCEEEEECTT-SCBCCT
T ss_pred --cEEEeCcccchheeeeeEEe---------cccccc-------------ccCCcCCCcceeCCCEEEEECCC-CCCCCC
Confidence 68999999999865433110 000000 00123469999999999999966 899999
Q ss_pred CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEE
Q psy14338 1566 SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVV 1645 (1761)
Q Consensus 1566 G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~ 1645 (1761)
|++|||+|+|+++++|||| +|++|++.|..+ ++.+||||||+|++ + | |+ |+|+
T Consensus 342 g~~GEl~v~g~~v~~GY~~---~~~~t~~~f~~~-----~g~~~~~TGDlg~~------~-d--------G~----l~~~ 394 (511)
T 3e7w_A 342 GEKGEIVIAGPSVSRGYLG---EPELTEKAFFSH-----EGQWAYRTGDAGFI------Q-D--------GQ----IFCQ 394 (511)
T ss_dssp TCCEEEEEESTTSCCCBTT---CHHHHHHHEEES-----SSSEEEEEEEEEEE------E-T--------TE----EEEE
T ss_pred CCceEEEEecCccChhhCC---CcccchhhhcCC-----CCCEEEeCCCeEEc------c-C--------Ce----EEEE
Confidence 9999999999999999999 999999999642 35668999999999 5 7 99 9999
Q ss_pred cccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCch-----hHhhHHHHHHHHHhhhc
Q psy14338 1646 GALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNES-----EALDLVPLVTNAVLEEH 1715 (1761)
Q Consensus 1646 GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~-----~~~~l~~~l~~~~Lp~~ 1715 (1761)
||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+...... ..++++++|+++ || .
T Consensus 395 GR~~d~ik~~G~~v~p~eIE~-~l~~~p~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~l~~~l~~~-L~-~ 471 (511)
T 3e7w_A 395 GRLDFQIKLHGYRMELEEIEF-HVRQSQYVRSAVVIPYQPNGTVEYLIAAIVPEEHEFEKEFQLTSAIKKELAAS-LP-A 471 (511)
T ss_dssp EESSSEEEETTEEEEHHHHHH-HHHHSTTEEEEEEEEECSSSSCCEEEEEEEECCCCCSSHHHHHHHHHHHHHHH-SC-G
T ss_pred ccccCEEEECCEEeCHHHHHH-HHHhCCCcceEEEEEEcCCCCceEEEEEEEeccccccchhhHHHHHHHHHHhh-Cc-h
Confidence 999999999999999999999 8999999999999974 347888888754321 136799999987 88 9
Q ss_pred CceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1716 HLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1716 ~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
||+|+.|++++ +||+|+||||||++|++.+.+.
T Consensus 472 ~~~P~~~~~v~--~lP~t~~GKi~R~~L~~~~~~~ 504 (511)
T 3e7w_A 472 YMIPRKFIYQD--HIQMTANGKIDRKRIGEEVLVR 504 (511)
T ss_dssp GGSCSEEEECS--CCCBCTTSCBCHHHHHHHHHHH
T ss_pred hhCCeeEEEec--cCCCCCCcCccHHHHHhHHhhh
Confidence 99999999999 9999999999999999998654
|
| >1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-69 Score=696.29 Aligned_cols=502 Identities=19% Similarity=0.211 Sum_probs=364.8
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+++. ++|+++|+++.+. ++++++||+||+++++++|++|++. |+++||+|+|+++|++++++++|
T Consensus 18 ~~l~~~l~~~a~-----~~p~~~a~~~~~~-~~~~~~Ty~el~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~l 90 (541)
T 1v25_A 18 LNLWDFLERAAA-----LFGRKEVVSRLHT-GEVHRTTYAEVYQRARRLMGGLRAL-GVGVGDRVATLGFNHFRHLEAYF 90 (541)
T ss_dssp CCTHHHHHHHHH-----HSTTCEEEEECTT-SCEEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHHHHH
T ss_pred CCHHHHHHHHHH-----hCCCceEEEEecC-CCCceecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHH
Confidence 456676766654 6799999986543 3578999999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccc-----ccccccCC--ccccCCCCc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASN-----VVDIKSWP--TILDTDDMP 1315 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~ 1315 (1761)
||+++|+++|||+|.+|.+ ++.+++++++++++|++......+....... ++...... .........
T Consensus 91 A~~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (541)
T 1v25_A 91 AVPGMGAVLHTANPRLSPK------EIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEAL 164 (541)
T ss_dssp HHHHTTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEHHHHC
T ss_pred HHHhcCcEEEecCcccCHH------HHHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCCCCcccccHHHHh
Confidence 9999999999999988777 9999999999999999988766554332110 00000000 000000000
Q ss_pred cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHH--HHHHcCcCCCCeEEEEeCCccChhHHHHHHHHh
Q psy14338 1316 KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRS--MKLACELYPSRHIALCLDPYCGLGFALWVLSSV 1393 (1761)
Q Consensus 1316 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L 1393 (1761)
. .........+++++||+|||||||+||||+++|+++++.+.. ....++++++|+++.++|++|..++ ..++.++
T Consensus 165 ~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l 241 (541)
T 1v25_A 165 G--EEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAW-CLPYAAT 241 (541)
T ss_dssp C--SCCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHH-THHHHHH
T ss_pred h--ccCCcccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHH-HHHHHHH
Confidence 0 000113456789999999999999999999999999887665 2345678899999999999887776 5678899
Q ss_pred hcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHH
Q psy14338 1394 YSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLT 1473 (1761)
Q Consensus 1394 ~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~ 1473 (1761)
+.|+++++.+. .+++..+++.|+++++|+++++|+++..|++.. .....++++||.+++|||++++ .+.
T Consensus 242 ~~G~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~l~~lr~i~~gG~~l~~-~~~ 310 (541)
T 1v25_A 242 LVGAKQVLPGP---RLDPASLVELFDGEGVTFTAGVPTVWLALADYL-------ESTGHRLKTLRRLVVGGSAAPR-SLI 310 (541)
T ss_dssp HHTCEEEECTT---CCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHH-------HHHTCCCSSCCEEEECSSCCCH-HHH
T ss_pred hcCceEEeeCC---CCCHHHHHHHHHhcCeeEEecchHHHHHHHhhh-------hccCCcchhccEEEECCCCCCH-HHH
Confidence 99999999874 369999999999999999999999999997642 2235678999999999999999 777
Q ss_pred HHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEE
Q psy14338 1474 SAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVI 1553 (1761)
Q Consensus 1474 ~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 1553 (1761)
++| +.+ | ..+++.||+||++.+++........ ..+..+ .......++|+|++|++++
T Consensus 311 ~~~-~~~---g---~~~~~~YG~TE~~~~~~~~~~~~~~-------~~~~~~---------~~~~~~~~~G~p~~~~~~~ 367 (541)
T 1v25_A 311 ARF-ERM---G---VEVRQGYGLTETSPVVVQNFVKSHL-------ESLSEE---------EKLTLKAKTGLPIPLVRLR 367 (541)
T ss_dssp HHH-HHT---T---CEEEEEEECGGGSSEEEECCCCGGG-------TTSCHH---------HHHHHHTSCBEECTTCEEE
T ss_pred HHH-HHh---C---Cceeecccccccccceecccccccc-------cccCcc---------ccccccCCCCCcCCCcEEE
Confidence 777 443 3 5799999999987665443211000 000000 0001235699999999999
Q ss_pred EEcCCCCCCCCC--CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCC
Q psy14338 1554 IANPETKGQCGD--SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPV 1631 (1761)
Q Consensus 1554 v~d~~~~~~~p~--G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~ 1631 (1761)
|+|++ ++++|. |++|||+|+||++++|||| +|++|+++|. .+|||||||+|++ |+|
T Consensus 368 i~d~~-g~~~~~~~~~~GEl~v~g~~v~~GY~~---~p~~t~~~f~--------~~g~~~TGDlg~~------d~d---- 425 (541)
T 1v25_A 368 VADEE-GRPVPKDGKALGEVQLKGPWITGGYYG---NEEATRSALT--------PDGFFRTGDIAVW------DEE---- 425 (541)
T ss_dssp EECTT-SCBCCSSSCCCEEEEEESTTSBSSCBT---CHHHHHTTBC--------TTSCEEEEEEEEE------CTT----
T ss_pred EECCC-CCCCCCCCCcceEEEEeCcchhccccC---Chhhhhhhcc--------CCCCeEcCCEEEE------cCC----
Confidence 99965 788885 3799999999999999999 9999999993 4789999999999 999
Q ss_pred CCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHH
Q psy14338 1632 PPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPL 1706 (1761)
Q Consensus 1632 ~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~ 1706 (1761)
|+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+..+...+.++++++
T Consensus 426 ----G~----l~~~GR~~d~ik~~G~~v~p~eIE~-~l~~~p~V~~a~Vv~~~~~~~~~~~~a~vv~~~~~~~~~~l~~~ 496 (541)
T 1v25_A 426 ----GY----VEIKDRLKDLIKSGGEWISSVDLEN-ALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEH 496 (541)
T ss_dssp ----CC----EEEEEESSCEEEETTEEEEHHHHHC-C----------CEEEEECSSSSEEEEECC---------------
T ss_pred ----ce----EEEeecccceeeeCCEEECHHHHHH-HHHhCCCceEEEEEEecCCCcCceEEEEEEECCCCCCHHHHHHH
Confidence 99 9999999999999999999999999 8999999999999975 45788888876555667889999
Q ss_pred HHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1707 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1707 l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
+++..|| .||+|+.|++++ +||+|+|||+||++|++.+.
T Consensus 497 ~~~~~L~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~ 535 (541)
T 1v25_A 497 LLKAGFA-KWQLPDAYVFAE--EIPRTSAGKFLKRALREQYK 535 (541)
T ss_dssp ----CCC-TTTSCSBC----------------CCTTHHHHST
T ss_pred HHhccCc-cccCCcEEEEeC--CCCCCCccCeeHHHHHHHHH
Confidence 9882388 999999999999 99999999999999999873
|
| >3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-68 Score=690.83 Aligned_cols=494 Identities=16% Similarity=0.193 Sum_probs=396.9
Q ss_pred ccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q psy14338 1166 YLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCL 1245 (1761)
Q Consensus 1166 ~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l 1245 (1761)
.+.|.+++. ++||++|++ +.++++||+||+++++++|++|.+. |+++||+|+++++|++++++++|||+
T Consensus 4 ~~~l~~~a~-----~~p~~~A~~-----~~~~~~Ty~el~~~~~~lA~~L~~~-g~~~gd~V~i~~~n~~e~~~~~la~~ 72 (512)
T 3fce_A 4 LEQIEKWAA-----ETPDQTAFV-----WRDAKITYKQLKEDSDALAHWISSE-YPDDRSPIMVYGHMQPEMIINFLGCV 72 (512)
T ss_dssp HHHHHHHHH-----HSTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHH-STTCCCCEEEEESSCHHHHHHHHHHH
T ss_pred HHHHHHHHH-----HCCCceEEE-----eCCceEEHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 344444443 779999999 6778999999999999999999999 99999999999999999999999999
Q ss_pred HcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhccCC
Q psy14338 1246 YVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALYRA 1325 (1761)
Q Consensus 1246 ~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1325 (1761)
++|+++||++|.+|.+ ++.+++++++++++|++...... .. ....+....+......... ........
T Consensus 73 ~~G~v~vpl~~~~~~~------~l~~il~~~~~~~~i~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 140 (512)
T 3fce_A 73 KAGHAYIPVDLSIPAD------RVQRIAENSGAKLLLSATAVTVT--DL-PVRIVSEDNLKDIFFTHKG---NTPNPEHA 140 (512)
T ss_dssp HTTCCEEEEETTSCHH------HHHHHHHHSCCCEEEESSCCCSS--CC-SSEEEETHHHHHHHHHTTT---CCCCGGGS
T ss_pred HhCCEEEeeCCCCcHH------HHHHHHHhcCCCEEEecCccccc--cc-ccceechhhhhhhcccccc---cCCCcccc
Confidence 9999999999988777 99999999999999987532100 00 0000000000000000000 00111234
Q ss_pred CCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCC
Q psy14338 1326 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 1405 (1761)
Q Consensus 1326 ~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~ 1405 (1761)
..+++++||+|||||||.||||+++|+++.+.+.+....+++.++|+++.++|++|+.++ ..++.+++.|+++++.+.
T Consensus 141 ~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~- 218 (512)
T 3fce_A 141 VKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSV-MDIYPSLVTGGTLWAIDK- 218 (512)
T ss_dssp CCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGH-HHHHHHHHTTCEEEECCH-
T ss_pred CCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHH-HHHHHHHhCCCEEEECCH-
Confidence 578999999999999999999999999999999999999999999999999999988887 678999999999999875
Q ss_pred ccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCC
Q psy14338 1406 EVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGL 1485 (1761)
Q Consensus 1406 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~ 1485 (1761)
...+++..+++.|+++++|+++++|+++..++.. ......++++||.+++|||++++ .+.+++.+.|+.
T Consensus 219 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------~~~~~~~~~~lr~~~~~G~~l~~-~~~~~~~~~~~~--- 287 (512)
T 3fce_A 219 DMIARPKDLFASLEQSDIQVWTSTPSFAEMCLME-------ASFSESMLPNMKTFLFCGEVLPN-EVARKLIERFPK--- 287 (512)
T ss_dssp HHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTS-------TTCSTTTSTTCCEEEECSSCCCH-HHHHHHHHHCTT---
T ss_pred HHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhh-------ccccchhCccccEEEEecCcCCH-HHHHHHHHHCCC---
Confidence 2247899999999999999999999999998653 22345678999999999999999 888888887743
Q ss_pred CCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCC
Q psy14338 1486 SPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGD 1565 (1761)
Q Consensus 1486 ~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~ 1565 (1761)
..+++.||+||++.+++.... ..... ......++|+|+++++++|+|++ ++++|.
T Consensus 288 --~~i~~~YG~TE~~~~~~~~~~---------~~~~~-------------~~~~~~~~G~~~~~~~~~i~d~~-g~~~~~ 342 (512)
T 3fce_A 288 --ATIMNTYGPTEATVAVTGIHV---------TEEVL-------------DQYKSLPVGYCKSDCRLLIMKED-GTIAPD 342 (512)
T ss_dssp --CEEEEEECCGGGSSCSEEEEC---------CHHHH-------------HHCSSCCCEEECTTCEEEEECSS-SCBCCT
T ss_pred --CEEEeCcccChhhhheeeEEe---------ccccc-------------cccCCCccccccCCcEEEEECCC-CCCCCC
Confidence 689999999998764432110 00000 00123469999999999999954 899999
Q ss_pred CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEE
Q psy14338 1566 SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVV 1645 (1761)
Q Consensus 1566 G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~ 1645 (1761)
|++|||+|+||+++.|||| +|++|++.|... +++|||||||+|++ +| |+ |+|+
T Consensus 343 g~~GEl~v~g~~v~~GY~~---~~~~t~~~f~~~-----~~~~~~~TGDlg~~-------~d--------G~----l~i~ 395 (512)
T 3fce_A 343 GEKGEIVIVGPSVSVGYLG---SPELTEKAFTMI-----DGERAYKTGDAGYV-------EN--------GL----LFYN 395 (512)
T ss_dssp TSCEEEEEESTTSCSCBTT---CHHHHHHHEEEE-----TTEEEEEEEEEEEE-------ET--------TE----EEEE
T ss_pred CCeEEEEEeccccChhhcC---CchhhhhccccC-----CCCEEEeCCceEEe-------cC--------CE----EEEe
Confidence 9999999999999999999 999999999531 46799999999998 47 99 9999
Q ss_pred cccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCch-----hHhhHHHHHHHHHhhhc
Q psy14338 1646 GALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNES-----EALDLVPLVTNAVLEEH 1715 (1761)
Q Consensus 1646 GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~-----~~~~l~~~l~~~~Lp~~ 1715 (1761)
||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+...... ..++++++|+++ || .
T Consensus 396 GR~~d~ik~~G~~v~p~eIE~-~l~~~p~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~l~~~l~~~-L~-~ 472 (512)
T 3fce_A 396 GRLDFQIKLHGYRMELEEIEH-HLRACSYVEGAVIVPIKKGEKYDYLLAVVVPGEHSFEKEFKLTSAIKKELNER-LP-N 472 (512)
T ss_dssp EEGGGCEEETTEEECHHHHHH-HHHHSTTEEEEEEEEEEETTEEEEEEEEEEECSCCCSSHHHHHHHHHHHHHTT-SC-G
T ss_pred cccCCEEEECCEEECHHHHHH-HHHhCCCcceEEEEEEecCCCceEEEEEEecCCccccchhhhHHHHHHHHHhh-Cc-h
Confidence 999999999999999999999 8999999999999964 346888888754321 235789999986 88 9
Q ss_pred CceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCC
Q psy14338 1716 HLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 1752 (1761)
Q Consensus 1716 ~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~ 1752 (1761)
||+|+.|++++ +||+|+||||||++|++.+.+...
T Consensus 473 ~~~P~~~~~~~--~lP~t~~GKi~R~~L~~~~~~~~~ 507 (512)
T 3fce_A 473 YMIPRKFMYQS--SIPMTPNGKVDRKKLLSEVTALEH 507 (512)
T ss_dssp GGSCSEEEECS--CCCBCTTSSBCHHHHHHHHHC---
T ss_pred hcCCeEEEEec--ccCCCCCcChHHHHHHhhhhhccc
Confidence 99999999999 999999999999999999977654
|
| >3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-68 Score=681.61 Aligned_cols=472 Identities=19% Similarity=0.183 Sum_probs=373.2
Q ss_pred ccccccccccccCCCCcCCCCC-CCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPV-PPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICA 1240 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~-~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva 1240 (1761)
..++.+.+.+++. ++|+ ++|++ ++++++||+||+++++++|+.|. .|++|+|+++|+++++++
T Consensus 21 ~~tl~~~l~~~a~-----~~p~d~~Al~-----~~~~~~Ty~eL~~~~~~~A~~L~------~~~~V~i~~~~~~~~~~~ 84 (505)
T 3nyq_A 21 MSSLFPALSPAPT-----GAPADRPALR-----FGERSLTYAELAAAAGATAGRIG------GAGRVAVWATPAMETGVA 84 (505)
T ss_dssp ---CCTTTSSCCC-----SGGGGSEEEE-----ETTEEEEHHHHHHHHHHHHTTCC---------CEEEECCSSHHHHHH
T ss_pred cchhHHHHHHHHH-----hCCCCCeEEE-----ECCeeeeHHHHHHHHHHHHhhcc------CCCEEEEEcCCCHHHHHH
Confidence 3466677766654 5576 99999 67899999999999999998663 488999999999999999
Q ss_pred HHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhh
Q psy14338 1241 FYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLA 1320 (1761)
Q Consensus 1241 ~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1320 (1761)
+|||+|+|+++|||||.+|.+ ++.+++++++++++|++...... ........+. . .... ...
T Consensus 85 ~la~~~~Ga~~vpl~~~~~~~------~l~~il~~~~~~~vi~~~~~~~~-~~~~~~~~~~---~----~~~~----~~~ 146 (505)
T 3nyq_A 85 VVAALLAGVAAVPLNPKSGDK------ELAHILSDSAPSLVLAPPDAELP-PALGALERVD---V----DVRA----RGA 146 (505)
T ss_dssp HHHHHHHTCCEEEECTTCCHH------HHHHHHHHHCCSEEEECTTCCCC-GGGTTSEEEE---C----CTTC----CCC
T ss_pred HHHHHHhCCEEEEcCCCCCHH------HHHHHHHHCCCCEEEECCccccc-hhhccccccc---c----cccc----ccC
Confidence 999999999999999988887 99999999999999998652100 0000000000 0 0000 001
Q ss_pred hccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEE
Q psy14338 1321 ALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSI 1400 (1761)
Q Consensus 1321 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~v 1400 (1761)
.......++++|||+|||||||+||||+++|+++.+.+.+....+++.++|+++..+|++|.++++..++.+|+.|++++
T Consensus 147 ~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~ 226 (505)
T 3nyq_A 147 VPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVR 226 (505)
T ss_dssp CCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEE
T ss_pred CCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEE
Confidence 11234578999999999999999999999999999999999999999999999999999999888778999999999999
Q ss_pred EeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHH
Q psy14338 1401 LIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLF 1480 (1761)
Q Consensus 1401 l~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~ 1480 (1761)
+.+. +++..+++.+ ++++|+++++|+++..+++.+... ......++++|.+++||+++++ .+.+++.+.+
T Consensus 227 ~~~~----~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~----~~~~~~l~~lr~i~~gg~~l~~-~~~~~~~~~~ 296 (505)
T 3nyq_A 227 HLGR----FSTEGAAREL-NDGATMLFGVPTMYHRIAETLPAD----PELAKALAGARLLVSGSAALPV-HDHERIAAAT 296 (505)
T ss_dssp ECSS----CCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGC----HHHHHHHHHCSEEEECSSCCCH-HHHHHHHHHH
T ss_pred ECCC----CChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcC----chhhcccccceEEEECCCCCCH-HHHHHHHHhc
Confidence 9874 7899999999 889999999999999998743211 1122346789999999999999 7888888776
Q ss_pred hhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCC
Q psy14338 1481 SALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETK 1560 (1761)
Q Consensus 1481 ~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~ 1560 (1761)
+ ..++|.||+||+++.+...... .....++|+|++|++++|+|++ +
T Consensus 297 ~------~~~~~~YG~TE~~~~~~~~~~~---------------------------~~~~~~vG~p~~~~~~~i~d~~-g 342 (505)
T 3nyq_A 297 G------RRVIERYGMTETLMNTSVRADG---------------------------EPRAGTVGVPLPGVELRLVEED-G 342 (505)
T ss_dssp S------CCCEEEEEETTTEEEEECCTTS---------------------------CCCTTCCCEECTTCEEEEC-----
T ss_pred C------CeeecccchhhcccccccCCCC---------------------------CCCCCCcccCCCCCEEEEECCC-C
Confidence 3 5899999999987655432110 0112459999999999999966 7
Q ss_pred CCCCC---CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCc
Q psy14338 1561 GQCGD---SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSK 1637 (1761)
Q Consensus 1561 ~~~p~---G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~ 1637 (1761)
++++. |++|||+|+|+++++|||| +|+.|+++| ..+|||||||+|++ |+| |+
T Consensus 343 ~~~~~~~~g~~GEl~v~g~~v~~GY~~---~~~~t~~~f--------~~~g~y~TGDl~~~------~~d--------G~ 397 (505)
T 3nyq_A 343 TPIAALDGESVGEIQVRGPNLFTEYLN---RPDATAAAF--------TEDGFFRTGDMAVR------DPD--------GY 397 (505)
T ss_dssp -CCCCCCSCCCEEEEEESTTSCCEETT---CHHHHHHTB--------CTTSCEEEEEEEEE------CTT--------SC
T ss_pred CCcccCCCCceEEEEEecCchhhhhCC---ChhHhhhhh--------cCCCCCccCCeEEE------CCC--------cc
Confidence 88876 9999999999999999999 999999999 35789999999999 999 99
Q ss_pred ccceEEEEccc-CCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC--CchhHhhHHHHHHH
Q psy14338 1638 LHDAVFVVGAL-DETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG--NESEALDLVPLVTN 1709 (1761)
Q Consensus 1638 ~~~~l~~~GR~-dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~--~~~~~~~l~~~l~~ 1709 (1761)
|+|+||+ |||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+... ...+.++|+++|++
T Consensus 398 ----l~~~GR~~d~~ik~~G~~v~~~eIE~-~l~~~p~V~~a~Vv~~~~~~~g~~l~a~vv~~~~~~~~~~~~l~~~l~~ 472 (505)
T 3nyq_A 398 ----VRIVGRKATDLIKSGGYKIGAGEIEN-ALLEHPEVREAAVTGEPDPDLGERIVAWIVPADPAAPPALGTLADHVAA 472 (505)
T ss_dssp ----EEEEEESSCCCEEETTEEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEESSTTSCCCHHHHHHHHHH
T ss_pred ----EEEeCCccCceEEeCCEEECHHHHHH-HHHHCcCccEEEEEeeECCCCCcEEEEEEEECCCCCCCCHHHHHHHHHh
Confidence 9999998 699999999999999999 8999999999999974 347889988753 34567899999999
Q ss_pred HHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1710 AVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1710 ~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
+ || .||+|+.|++++ +||+|+||||||++|++
T Consensus 473 ~-L~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~ 504 (505)
T 3nyq_A 473 R-LA-PHKRPRVVRYLD--AVPRNDMGKIMKRALNR 504 (505)
T ss_dssp H-TC-GGGSCSEEEECS--CCCC-------------
T ss_pred h-CC-CCcCccEEEEEC--CCCCCCCcCeeHHhhcc
Confidence 7 98 999999999999 99999999999999986
|
| >1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-68 Score=699.08 Aligned_cols=500 Identities=15% Similarity=0.180 Sum_probs=396.9
Q ss_pred CCCCCCCceEEccC-CCCceeeCHHHHHHHHHHHHHHHH-hhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC
Q psy14338 1179 AGAPVPPGVSSVDT-RSAAQLLTCSQLHKRAERVGALLL-ERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~-~~~~~~lTY~eL~~~a~~lA~~L~-~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp 1256 (1761)
+++||++|+++.+. ...++++||+||+++++++|+.|+ +. |+++||+|+|+++|++++++++|||+++|++++|++|
T Consensus 93 ~~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~-Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~Gav~vpl~~ 171 (663)
T 1ry2_A 93 LKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSM-GVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFA 171 (663)
T ss_dssp TTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTS-CCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCT
T ss_pred ccCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeeCC
Confidence 36799999996533 235689999999999999999999 88 9999999999999999999999999999999999999
Q ss_pred CCCCCccCChHHHHHHHHhcCCeEEEechhHH---------HHHhhhcc-----ccccccccCC--cc-c-cCCCCc---
Q psy14338 1257 PHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI---------KLLKSKEA-----SNVVDIKSWP--TI-L-DTDDMP--- 1315 (1761)
Q Consensus 1257 ~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~---------~~~~~~~~-----~~~~~~~~~~--~~-~-~~~~~~--- 1315 (1761)
.+|.+ ++.+++++++++++|+++... ..+..... ..++...... .. . ......
T Consensus 172 ~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 245 (663)
T 1ry2_A 172 GFSSN------SLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWAT 245 (663)
T ss_dssp TSCHH------HHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSSSEEEHHH
T ss_pred CCCHH------HHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCccccCCCccccHHH
Confidence 87777 999999999999999986531 11111110 0011000000 00 0 000000
Q ss_pred ---cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHH-HHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1316 ---KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR-SMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1316 ---~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
............+++++||+|||||||+||||+++|++++..+. .....+++.++|+++..++++|..+..+.++.
T Consensus 246 ~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~ 325 (663)
T 1ry2_A 246 EKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYG 325 (663)
T ss_dssp HHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHHHTTHH
T ss_pred HHhhcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcEEEEcCCcHHhhhhHHHHHH
Confidence 00000112334678999999999999999999999999887664 45667899999999999999998888777899
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+|++|+++++.+.....+++..+++.|++++||+++++|++++.|.+... ......++++||.+++|||++++ +
T Consensus 326 ~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~-----~~~~~~~l~sLr~i~~gGe~l~~-~ 399 (663)
T 1ry2_A 326 PLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGD-----SYIENHSLKSLRCLGSVGEPIAA-E 399 (663)
T ss_dssp HHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCT-----TSSSSCCCTTCCEEEECSSCCCH-H
T ss_pred HHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCc-----cccccCCcCceEEEEEEcCCCCH-H
Confidence 99999999999754334689999999999999999999999999976321 11235678999999999999999 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+.+ |..++.+++.||+||++..++...... ....+.+++|+|++|++
T Consensus 400 ~~~~~~~~~---g~~~~~i~~~YG~TE~~~~~~~~~~~~------------------------~~~~~~gs~G~p~~g~~ 452 (663)
T 1ry2_A 400 VWEWYSEKI---GKNEIPIVDTYWQTESGSHLVTPLAGG------------------------VTPMKPGSASFPFFGID 452 (663)
T ss_dssp HHHHHHHTT---SCSSSCEEECBCCTTTCSCSEECCTTT------------------------CCCCCTTCCCEECTTCC
T ss_pred HHHHHHHHh---CCCCceEEEeECCccccCeeeccCCCC------------------------CcccCCCccccCcCCCe
Confidence 777776654 545578999999999875443321100 00012346999999999
Q ss_pred EEEEcCCCCCCCCC-CcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1552 VIIANPETKGQCGD-SHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~-G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
++|+|+++++++|. |+.|||+|+| |++++|||| +|+.|.+.|.. ..+|||+|||+|++ |+|
T Consensus 453 v~i~d~~~g~~v~~~g~~Gel~i~g~~p~~~~gy~~---~~~~~~~~~~~------~~~g~y~TGDlg~~------d~d- 516 (663)
T 1ry2_A 453 AVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWK---NHDRYLDTYLN------PYPGYYFTGDGAAK------DKD- 516 (663)
T ss_dssp EEEECSSSTTCEECSSCEEEEEESSCCTTSCCEETT---CHHHHHHHHTS------SSTTSEEEEEEEEE------CTT-
T ss_pred EEEEcCCCCCcCCCCCcceEEEEecCCCchhccccc---ChHHHHHhhhc------CCCCEEEcCCEEEE------cCC-
Confidence 99999746899998 9999999999 589999999 99999998842 23689999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc------
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE------ 1697 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~------ 1697 (1761)
|+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.+++||++....
T Consensus 517 -------G~----l~i~GR~dd~Ik~~G~rI~~~eIE~-~l~~~p~V~ea~Vvg~~~~~~g~~~~a~Vv~~~~~~~~~~~ 584 (663)
T 1ry2_A 517 -------GY----IWILGRVDDVVNVSGHRLSTAEIEA-AIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKNKSSWSTAT 584 (663)
T ss_dssp -------CC----EEECSCTTSCBCSSSCCBCHHHHHH-HHHSSTTEEEEEEECCCCCTTSCCCEEEEEEC---------
T ss_pred -------CC----EEEEeecCCEEEECCEEcCHHHHHH-HHHhCCCcceEEEEEEecCCCCeEEEEEEEEcCCCcccccc
Confidence 99 9999999999999999999999999 8999999999999984 45788998875321
Q ss_pred -----hhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1698 -----SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1698 -----~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
...++|+++|+++ |+ .||+|+.|++++ +||+|+||||+|++|++.+.+.
T Consensus 585 ~~~~~~l~~~l~~~l~~~-L~-~~~~P~~i~~v~--~lP~T~sGKi~R~~L~~~~~~~ 638 (663)
T 1ry2_A 585 DDELQDIKKHLVFTVRKD-IG-PFAAPKLIILVD--DLPKTRSGKIMRRILRKILAGE 638 (663)
T ss_dssp ---CCSHHHHHHHHHHHH-TC-TTTSCSEEEECS--CCCBCTTSCBCHHHHHHSCC--
T ss_pred chhHHHHHHHHHHHHHHh-CC-CCcCCeEEEEcC--CCCCCCccCchHHHHHHHHcCC
Confidence 1257899999987 88 999999999999 9999999999999999987543
|
| >3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-68 Score=690.11 Aligned_cols=495 Identities=13% Similarity=0.140 Sum_probs=388.6
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++.+.|.+++. ++|+++|+. +.++++||+||+++++++|++|.+. |+++||+|+|+++|++++++++||
T Consensus 5 ~l~~~l~~~a~-----~~p~~~a~~-----~~~~~~Ty~el~~~~~~lA~~L~~~-g~~~gd~V~i~~~n~~~~~~~~lA 73 (521)
T 3l8c_A 5 DMIDSIEQFAQ-----TQADFPVYD-----CLGERRTYGQLKRDSDSIAAFIDSL-ALLAKSPVLVFGAQTYDMLATFVA 73 (521)
T ss_dssp CHHHHHHHHHH-----HSTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHT-CCCTTCCEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HCCCCccee-----cCCCeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCCHHHHHHHHH
Confidence 34455555554 679999999 6788999999999999999999999 999999999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCCCCccchhhhcc
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKKLAALY 1323 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1323 (1761)
|+++|+++|||+|.+|.+ ++.+++++++++++|++.+....+.... .+....+..... .. ......
T Consensus 74 ~~~~G~v~vpl~~~~~~~------~l~~il~~~~~~~ii~~~~~~~~~~~~~---~~~~~~~~~~~~-~~----~~~~~~ 139 (521)
T 3l8c_A 74 LTKSGHAYIPVDVHSAPE------RILAIIEIAKPSLIIAIEEFPLTIEGIS---LVSLSEIESAKL-AE----MPYERT 139 (521)
T ss_dssp HHHTTCCEEEEETTSCHH------HHHHHHHHSCCSEEEESSCCCSCCTTSE---EEEHHHHHHHHH-HT----CCCCCS
T ss_pred HHHhCCEEEecCccccHH------HHHHHHHhCCCCEEEecCccccccccCc---ccchhhhhhccc-cc----CCcccC
Confidence 999999999999987777 9999999999999999875422111100 000000000000 00 000112
Q ss_pred CCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHH--cCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEE
Q psy14338 1324 RAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA--CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 1401 (1761)
Q Consensus 1324 ~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl 1401 (1761)
....+++++||+|||||||.||||+++|+++.+.+.+.... +++.++++++...+++|+.+. ..++.+++.|+++++
T Consensus 140 ~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~G~~~~~ 218 (521)
T 3l8c_A 140 HSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSV-MYWAPTLALGGTLFA 218 (521)
T ss_dssp SCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGH-HHHHHHHHTTCEEEE
T ss_pred CCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHH-HHHHHHHhcCCEEEE
Confidence 34578999999999999999999999999999988887766 677788887777777777665 678889999999999
Q ss_pred eCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHh
Q psy14338 1402 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFS 1481 (1761)
Q Consensus 1402 ~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~ 1481 (1761)
.+.. ...++..+++.|.++++|++.++|+++..+... ......++++||.+++||+++++ .+.+++.+.++
T Consensus 219 ~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------~~~~~~~~~~lr~~~~gG~~l~~-~~~~~~~~~~~ 289 (521)
T 3l8c_A 219 LPKE-LVADFKQLFTTIAQLPVGIWTSTPSFADMAMLS-------DDFCQAKMPALTHFYFDGEELTV-STARKLFERFP 289 (521)
T ss_dssp CCGG-GTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTS-------TTCSTTTCTTCCEEEECSSCCCH-HHHHHHHHHCT
T ss_pred cCHH-HhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhh-------hccccccCccceEEEEecccCCH-HHHHHHHHHCC
Confidence 8752 245899999999999999999999999988653 12345678899999999999999 78788877764
Q ss_pred hCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCC
Q psy14338 1482 ALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKG 1561 (1761)
Q Consensus 1482 ~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~ 1561 (1761)
. ..+++.||+||++.+++... ...... ......++|+|++|++++|+|++ ++
T Consensus 290 ~-----~~i~~~YG~TE~~~~~~~~~---------~~~~~~-------------~~~~~~~vG~p~~~~~~~i~d~~-g~ 341 (521)
T 3l8c_A 290 S-----AKIINAYGPTEATVALSAIE---------ITREMV-------------DNYTRLPIGYPKPDSPTYIIDED-GK 341 (521)
T ss_dssp T-----CEEEEEECCGGGSSCSEEEE---------ECHHHH-------------HHCSSCEEEEECTTSCEEEECTT-SC
T ss_pred C-----ceEEeCcCccHHhhhhceee---------cccccc-------------cCCCccccccccCCCEEEEECCC-cC
Confidence 3 68999999999865432110 000000 00123469999999999999965 89
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
++|.|++|||+|+||++++|||| +|+.|+++|... +++|||+|||+|++ |+| |+
T Consensus 342 ~~~~g~~GEl~v~g~~v~~GY~~---~~~~t~~~f~~~-----~~~~~~~TGDlg~~------d~d--------G~---- 395 (521)
T 3l8c_A 342 ELSSGEQGEIIVTGPAVSKGYLN---NPEKTAEAFFTF-----KGQPAYHTGDIGSL------TED--------NI---- 395 (521)
T ss_dssp BCCTTCCEEEEEESTTSCSCBTT---CHHHHHHHEEEE-----TTEEEEEEEEEEEE------CSS--------SC----
T ss_pred CCCCCCceEEEecccccChhhcC---CchHhhccCcCC-----CCceeeeCCCEEEE------eCC--------Ce----
Confidence 99999999999999999999999 999999999642 46799999999999 999 99
Q ss_pred EEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee------CCeEEEEEEeCCCch--------hHhhHHHHH
Q psy14338 1642 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW------TNLLVVVVELDGNES--------EALDLVPLV 1707 (1761)
Q Consensus 1642 l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~------~~~~~a~v~~~~~~~--------~~~~l~~~l 1707 (1761)
++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+...... ..++|+++|
T Consensus 396 l~~~GR~~d~i~~~G~~v~p~eIE~-~l~~~p~V~~a~vv~~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~l~~~l 474 (521)
T 3l8c_A 396 LLYGGRLDFQIKYAGYRIELEDVSQ-QLNQSPMVASAVAVPRYNKEHKVQNLLAYIVVKDGVKERFDRELELTKAIKASV 474 (521)
T ss_dssp EEEEEEGGGBCC-----CBHHHHHH-HHHTSTTEEEEEEECCCSSSCC---CEEEEEECTTSGGGCSSHHHHHHHHHHHS
T ss_pred EEEeCcccceEeECCEEeCHHHHHH-HHHcCCCcceEEEEEeecCCCCceEEEEEEEecCccccccccchhhHHHHHHHH
Confidence 9999999999999999999999999 8999999999999963 246788888754321 256789999
Q ss_pred HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCCC
Q psy14338 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 1752 (1761)
Q Consensus 1708 ~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~~ 1752 (1761)
+++ || .||+|..|++++ +||+|+||||||++|++.+.+...
T Consensus 475 ~~~-l~-~~~~P~~i~~v~--~lP~t~~GKidr~~L~~~~~~~~~ 515 (521)
T 3l8c_A 475 KDH-MM-SYMMPSKFLYRD--SLPLTPNGKIDIKTLINEVNNREG 515 (521)
T ss_dssp GGG-SC-GGGSCSEEEECS--SCCBCTTSSBCHHHHHHHTC----
T ss_pred Hhh-Cc-cccCCeEEEEec--ccCCCCCcCccHHHHhhhhhcCCc
Confidence 886 88 999999999999 999999999999999999865543
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-68 Score=735.59 Aligned_cols=498 Identities=16% Similarity=0.239 Sum_probs=330.3
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
..++++.|.+++. ++||++|+++.+ .++++||+||+++++++|++|++. |+++||+|+|+++|++++++++
T Consensus 60 ~~tl~~~l~~~a~-----~~pd~~Al~~~~---~~~~~TY~eL~~~~~~lA~~L~~~-Gv~~gd~V~i~~~ns~e~~v~~ 130 (979)
T 3tsy_A 60 HLSLHDYIFQNIS-----EFATKPCLINGP---TGHVYTYSDVHVISRQIAANFHKL-GVNQNDVVMLLLPNCPEFVLSF 130 (979)
T ss_dssp TSCHHHHHTTTGG-----GTTTSEEEEETT---TCCEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECSSCHHHHHHH
T ss_pred CCCHHHHHHHHHH-----hCCCCeEEEECC---CCcEEEHHHHHHHHHHHHHHHHHc-CCCCcCEEEEEeCCCHHHHHHH
Confidence 3578888888775 779999998421 258999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc---cccccccc------------CC
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA---SNVVDIKS------------WP 1306 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~------------~~ 1306 (1761)
|||+|+|+++|||||.+|.+ ++.+++++++++++|++......+..... ..++.... +.
T Consensus 131 lA~~~~Ga~~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (979)
T 3tsy_A 131 LAASFRGATATAANPFFTPA------EIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFT 204 (979)
T ss_dssp HHHHHHTCEEEEECTTSCHH------HHHHHHHHHTEEEEEECSTTTTTSHHHHHTSCCEEEECCCCTTSCCCTTEEEGG
T ss_pred HHHHHcCCEEEeeCCCCCHH------HHHHHHHHcCCeEEEEChHHHHHHHHHhhcCCceEEEeCCcccccCCcccccHH
Confidence 99999999999999988887 99999999999999999865443332211 11111100 11
Q ss_pred ccccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHH----HcCcCCCCeEEEEeCCccC
Q psy14338 1307 TILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----ACELYPSRHIALCLDPYCG 1382 (1761)
Q Consensus 1307 ~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~ 1382 (1761)
.+.... .............++++|||+|||||||+||||+++|+++++.+..... .+++.++|+++..+|++|.
T Consensus 205 ~~~~~~--~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~ 282 (979)
T 3tsy_A 205 ELTQST--TEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHI 282 (979)
T ss_dssp GTSSCC--SGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSH
T ss_pred HHhhcc--ccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHH
Confidence 111100 0000112233567899999999999999999999999999998877654 4567888999999999999
Q ss_pred hhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEe
Q psy14338 1383 LGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVV 1462 (1761)
Q Consensus 1383 ~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~ 1462 (1761)
+++...++.+|..|+++++.+. +++..+++.|+++++|+++++|+++..+++.. .....++++||.+++
T Consensus 283 ~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~l~~lr~~~~ 351 (979)
T 3tsy_A 283 YALNSIMLCGLRVGAAILIMPK----FEINLLLELIQRCKVTVAPMVPPIVLAIAKSS-------ETEKYDLSSIRVVKS 351 (979)
T ss_dssp HHHHHTHHHHHHHTCEEEECSS----CCHHHHHHHHHHHTCCEEEECHHHHHHHHHCG-------GGGTSCCTTCCEEEE
T ss_pred HHHHHHHHHHHhcCcEEEEeCC----CCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCc-------cccCCCccceEEEEE
Confidence 8887778899999999999884 78999999999999999999999999997642 335667899999999
Q ss_pred ecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceec
Q psy14338 1463 VAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLE 1542 (1761)
Q Consensus 1463 gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1542 (1761)
|||++++ .+.++|.+.|+. ..++|.||+||++.++........ .+...+.++
T Consensus 352 gg~~l~~-~~~~~~~~~~~~-----~~l~~~YG~TE~~~~~~~~~~~~~----------------------~~~~~~~~~ 403 (979)
T 3tsy_A 352 GAAPLGK-ELEDAVNAKFPN-----AKLGQGYGMTEAGPVLAMSLGFAK----------------------EPFPVKSGA 403 (979)
T ss_dssp SSCCCCS-SHHHHHHHHCTT-----CEEEECEECGGGCSEEEECGGGSS----------------------SCCCCCTTC
T ss_pred cCCCCCH-HHHHHHHHHCCC-----CeEEeeechhhhhHHHHhCCCCCC----------------------CccccCCCC
Confidence 9999999 888888887743 689999999998765543221100 011122356
Q ss_pred cccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccC
Q psy14338 1543 SGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTS 1622 (1761)
Q Consensus 1543 iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~ 1622 (1761)
+|+|++|++++|+|+++++++|.|++|||+|+|+++++|||| +|++|+++| ..+|||||||+|++
T Consensus 404 ~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~i~g~~v~~GY~~---~p~~t~~~f--------~~~g~~~TGDl~~~---- 468 (979)
T 3tsy_A 404 CGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGYLN---NPAATAETI--------DKDGWLHTGDIGLI---- 468 (979)
T ss_dssp CCEECSSCEEEEECTTSCCBCCTTCCEEEEEESTTSCSEETT---CHHHHHHHB--------CTTSCEEEEEEEEE----
T ss_pred cCcccCCcEEEEEeCCCCCCCCCCCccEEEEECCCccccccC---Chhhhhhhc--------cCCCcEEcCCEEEE----
Confidence 999999999999998889999999999999999999999999 999999999 46789999999999
Q ss_pred CCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CC
Q psy14338 1623 PAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GN 1696 (1761)
Q Consensus 1623 ~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~ 1696 (1761)
|+| |+ |+|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+.. +.
T Consensus 469 --~~d--------G~----l~~~GR~dd~ik~~G~~v~~~eIE~-~l~~~p~V~~~~Vv~~~~~~~g~~~~a~vv~~~~~ 533 (979)
T 3tsy_A 469 --DDD--------DE----LFIVDRLKELIKYKGFQVAPAELEA-LLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDS 533 (979)
T ss_dssp --CTT--------SC----EEEEEESCC----------------------------------------------------
T ss_pred --cCC--------ce----EEEecCCCCEEEECCEEECHHHHHH-HHHhCCCcceEEEEEecccCCCcEEEEEEEECCCC
Confidence 999 99 9999999999999999999999999 8999999999999973 45778888763 44
Q ss_pred chhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1697 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1697 ~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
..+.++++++|+++ || .||+|..|++++ +||+|+||||||++|++.+.+
T Consensus 534 ~~~~~~l~~~l~~~-l~-~~~~p~~i~~v~--~lP~t~~GKi~r~~L~~~~~~ 582 (979)
T 3tsy_A 534 ELSEDDVKQFVSKQ-VV-FYKRINKVFFTE--SIPKAPSGKILRKDLRAKLAN 582 (979)
T ss_dssp -----------------------------------------------------
T ss_pred CCCHHHHHHHHHHh-cc-cccCCeEEEEeC--CcCcCCCCCeeHHHHHHHHHh
Confidence 56778999999997 88 999999999999 999999999999999998854
|
| >2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-67 Score=676.34 Aligned_cols=468 Identities=18% Similarity=0.235 Sum_probs=378.2
Q ss_pred CCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCC
Q psy14338 1181 APVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQ 1260 (1761)
Q Consensus 1181 ~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~ 1260 (1761)
+|+++|++ +.++++||+||+++++++|++|++. |+++||+|+|+++|++++++++|||+++|+++||++|.+|.
T Consensus 36 ~p~~~A~~-----~~~~~~Ty~el~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~ 109 (529)
T 2v7b_A 36 RAGKTAYI-----DDTGSTTYGELEERARRFASALRTL-GVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTP 109 (529)
T ss_dssp GTTSEEEE-----CSSCEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEEECCTTCCH
T ss_pred cCCceEEE-----eCCCCccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEEecCcccCH
Confidence 69999999 6678999999999999999999999 99999999999999999999999999999999999998777
Q ss_pred CccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcc------ccccccc----------cCCccccCCCCccchhhhccC
Q psy14338 1261 NLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA------SNVVDIK----------SWPTILDTDDMPKKKLAALYR 1324 (1761)
Q Consensus 1261 ~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~------~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 1324 (1761)
+ ++.+++++++++++|++......+..... ..++... .+...... ........
T Consensus 110 ~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 178 (529)
T 2v7b_A 110 A------DYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESEPRLAPLFEELIDA-----AAPAAKAA 178 (529)
T ss_dssp H------HHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC------CCCBHHHHHHT-----SCCCSSCC
T ss_pred H------HHHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccccccccccchhhhhcc-----CCCccccc
Confidence 6 99999999999999999876654433211 0011000 00000000 00011123
Q ss_pred CCCCCCEEEEEeccCCCCCCceEEccHHHH-HHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeC
Q psy14338 1325 APTAEMLAYLDFSVSTTGMLAGIKMSHAAV-TSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 1403 (1761)
Q Consensus 1325 ~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~ 1403 (1761)
...+++++||+|||||||+||||+++|+++ .+........+++.++|+++.++|++|.+++...++.+|..|+++++.+
T Consensus 179 ~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 258 (529)
T 2v7b_A 179 ATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMA 258 (529)
T ss_dssp CCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECCC
T ss_pred CCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEec
Confidence 457899999999999999999999999999 6666555566788899999999999999888666788999999999885
Q ss_pred CCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhC
Q psy14338 1404 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 1483 (1761)
Q Consensus 1404 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~ 1483 (1761)
+ .+++..+++.|+++++|+++++|+++..+++.. ........+||.+++|||++++ .+.++|.+.++
T Consensus 259 ~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~~~~~~~~~lr~~~~gGe~l~~-~~~~~~~~~~g-- 325 (529)
T 2v7b_A 259 E---RPTADAIFARLVEHRPTVFYGVPTLYANMLVSP-------NLPARADVAIRICTSAGEALPR-EIGERFTAHFG-- 325 (529)
T ss_dssp S---CCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCT-------TCCCGGGCCCCEEEECSSCCCH-HHHHHHHHHHS--
T ss_pred C---CCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCc-------ccccccCCceEEEEEcCCCCCH-HHHHHHHHHhC--
Confidence 3 479999999999999999999999999987631 1111112389999999999999 88888888773
Q ss_pred CCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCC
Q psy14338 1484 GLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQC 1563 (1761)
Q Consensus 1484 g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~ 1563 (1761)
+.+++.||+||++.++...... ....+++|+|++|++++|+|++ ++++
T Consensus 326 ----~~i~~~YG~TE~~~~~~~~~~~---------------------------~~~~~~~G~p~~~~~~~i~d~~-g~~~ 373 (529)
T 2v7b_A 326 ----CEILDGIGSTEMLHIFLSNRAG---------------------------AVEYGTTGRPVPGYEIELRDEA-GHAV 373 (529)
T ss_dssp ----CCEEEEEECTTTSSEEEECCTT---------------------------CCCTTSCCEECTTCEEEEECTT-SCBC
T ss_pred ----CceeeeEchhhcCceeeccccC---------------------------CCccCCcccCCCCCEEEEECCC-CCCC
Confidence 5799999999985443322110 0112459999999999999955 8999
Q ss_pred CCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEE
Q psy14338 1564 GDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVF 1643 (1761)
Q Consensus 1564 p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~ 1643 (1761)
|.|++|||+|+|++++.|||| +|+.|+++|. ++||+|||+|++ ++| |+ |+
T Consensus 374 ~~g~~GEl~v~g~~~~~gY~~---~~~~t~~~f~---------~~~~~TGDl~~~------~~~--------G~----l~ 423 (529)
T 2v7b_A 374 PDGEVGDLYIKGPSAAVMYWN---NREKSRATFL---------GEWIRSGDKYCR------LPN--------GC----YV 423 (529)
T ss_dssp CTTSCEEEEEECTTCCCCBTT---CHHHHHHHEE---------TTEEEEEEEEEE------CTT--------SC----EE
T ss_pred CCCCccEEEEecCCcccccCC---ChHHHHHhhh---------cCCcccCceEEE------CCC--------cc----EE
Confidence 999999999999999999999 9999999993 689999999999 999 99 99
Q ss_pred EEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee----CCeEEEEEEeCCCc----hhHhhHHHHHHHHHhhhc
Q psy14338 1644 VVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW----TNLLVVVVELDGNE----SEALDLVPLVTNAVLEEH 1715 (1761)
Q Consensus 1644 ~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~----~~~~~a~v~~~~~~----~~~~~l~~~l~~~~Lp~~ 1715 (1761)
|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++|+..... ...++|+++|+++ || .
T Consensus 424 ~~GR~dd~ik~~G~~v~p~eIE~-~l~~~p~V~~~~vv~~~~~~~~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~-L~-~ 500 (529)
T 2v7b_A 424 YAGRSDDMLKVSGQYVSPVEVEM-VLVQHDAVLEAAVVGVDHGGLVKTRAFVVLKREFAPSEILAEELKAFVKDR-LA-P 500 (529)
T ss_dssp EEEEGGGCBC----CBCHHHHHH-HHTTSTTEEEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHTT-SC-T
T ss_pred EeCccCCeEEECCEEECHHHHHH-HHHhCCCcceEEEEEecCCCceEEEEEEEecCCCCcchhHHHHHHHHHHhh-cc-h
Confidence 99999999999999999999999 8999999999999985 34678888874322 1346899999986 88 9
Q ss_pred CceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1716 HLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1716 ~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
||+|+.|++++ +||+|+|||+||++|++
T Consensus 501 ~~~P~~i~~v~--~lP~t~~GKi~r~~L~~ 528 (529)
T 2v7b_A 501 HKYPRDIVFVD--DLPKTATGKIQRFKLRE 528 (529)
T ss_dssp TTSCSEEEEES--CCCBCTTSCBCHHHHHC
T ss_pred hhCCeEEEEec--cCCCCCccchhHHhHhh
Confidence 99999999999 99999999999999986
|
| >3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-66 Score=667.51 Aligned_cols=475 Identities=14% Similarity=0.113 Sum_probs=368.4
Q ss_pred ccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHH
Q psy14338 1164 TGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYG 1243 (1761)
Q Consensus 1164 ~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA 1243 (1761)
++++.|.+++. ++||++|++ ++++++||+||+++++++|++|++. +||+|+|+++|++++++++||
T Consensus 2 tl~~~l~~~a~-----~~pd~~Al~-----~~~~~~Ty~eL~~~~~~lA~~L~~~----~gd~V~i~~~n~~e~~~~~lA 67 (501)
T 3ipl_A 2 SLDFWLYKQAQ-----QNGHHIAIT-----DGQESYTYQNLYCEASLLAKRLKAY----QQSRVGLYIDNSIQSIILIHA 67 (501)
T ss_dssp -CCCHHHHHHH-----HHTTSEEEE-----CSSCEEEHHHHHHHHHHHHHHHHTT----CCSEEEEECCSSHHHHHHHHH
T ss_pred CHHHHHHHHHH-----hcCCceEEE-----eCCcEEEHHHHHHHHHHHHHHHHHc----CCCEEEEEcCCCHHHHHHHHH
Confidence 34555666654 679999999 7889999999999999999999875 899999999999999999999
Q ss_pred HHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccc----cccCCcc----------c
Q psy14338 1244 CLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVD----IKSWPTI----------L 1309 (1761)
Q Consensus 1244 ~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~----~~~~~~~----------~ 1309 (1761)
|+++|+++|||+|.+|.+ ++.+++++++++++|++...............+. ....... .
T Consensus 68 ~~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (501)
T 3ipl_A 68 CWLANIEIAMINTRLTPN------EMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDT 141 (501)
T ss_dssp HHHTTCEEEECCTTSCHH------HHHHHHHHTTCCEEEESSCCCCTTSEEEETTC------------------------
T ss_pred HHHcCCEEEecCccCCHH------HHHHHHHhcCCCEEEEccccccccccccccccceeeeeeccccccccccccccccc
Confidence 999999999999988777 9999999999999999875432211100000000 0000000 0
Q ss_pred cCCCC-c-cchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHH
Q psy14338 1310 DTDDM-P-KKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFAL 1387 (1761)
Q Consensus 1310 ~~~~~-~-~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 1387 (1761)
..... . ............++++|||+|||||||.||||+++|+++.+.+.+....+++.++|+++.++|++|..++ .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~ 220 (501)
T 3ipl_A 142 SNETVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGL-S 220 (501)
T ss_dssp --------CCHHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHHHH-H
T ss_pred chhhccccCCcccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHHHH-H
Confidence 00000 0 0111122334678999999999999999999999999999999999999999999999999999888887 4
Q ss_pred HHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCC
Q psy14338 1388 WVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEER 1467 (1761)
Q Consensus 1388 ~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l 1467 (1761)
.++.+++.|+++++.+. +++..+++.|+++++|+++++|+++..|++.. .....+||.+++|||++
T Consensus 221 ~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----------~~~~~~lr~i~~gG~~l 286 (501)
T 3ipl_A 221 VLLRAVIEGFTVRIVDK----FNAEQILTMIKNERITHISLVPQTLNWLMQQG----------LHEPYNLQKILLGGAKL 286 (501)
T ss_dssp HHHHHHHHTCEEEECSS----CCHHHHHHHHHHSCCCEEEECHHHHHHHHHHT----------CCSCTTCCEEEECSSCC
T ss_pred HHHHHHHcCceEEeCCC----CCHHHHHHHHHHcCCcEEEchHHHHHHHHhcC----------CCCcCcccEEEEeCCCC
Confidence 58899999999999874 79999999999999999999999999997742 11223899999999999
Q ss_pred ChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceecccccc
Q psy14338 1468 PRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL 1547 (1761)
Q Consensus 1468 ~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~ 1547 (1761)
++ .+.+++.+. | ..+++.||+||++..+.... .... ..+..++|+|+
T Consensus 287 ~~-~~~~~~~~~----~---~~~~~~YG~TE~~~~~~~~~-----------~~~~--------------~~~~~~~G~p~ 333 (501)
T 3ipl_A 287 SA-TMIETALQY----N---LPIYNSFGMTETCSQFLTAT-----------PEML--------------HARPDTVGMPS 333 (501)
T ss_dssp CH-HHHHHHHHT----T---CCEEEEEEEGGGTEEEEEEC-----------HHHH--------------HHCTTCCBEEC
T ss_pred CH-HHHHHHHHh----C---CCEeccccccccccceeecC-----------cccc--------------ccCCCCCCCCC
Confidence 99 777776652 3 57999999999865432211 0000 01123599999
Q ss_pred CCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCC
Q psy14338 1548 PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVA 1627 (1761)
Q Consensus 1548 ~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d 1627 (1761)
+|++++|+|++ .|..|||+|+|+++++|||| +|+.|++ | .+|||+|||+|++ |+|
T Consensus 334 ~~~~~~i~d~~------~~~~GEl~v~g~~~~~gY~~---~~~~t~~-~---------~~g~~~TGDl~~~------~~~ 388 (501)
T 3ipl_A 334 ANVDVKIKNPN------KEGHGELMIKGANVMNGYLY---PTDLTGT-F---------ENGYFNTGDIAEI------DHE 388 (501)
T ss_dssp TTCEEEEESCC------SSCCEEEEEESTTSCSCCSB---STTCCCS-E---------ETTEEEEEEEEEE------CTT
T ss_pred CCcEEEEecCC------CCCccEEEEeccchhhhhCc---Chhhcch-h---------cCCceecCCEEEE------cCC
Confidence 99999999965 46789999999999999999 9999887 6 4689999999999 999
Q ss_pred CCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhh
Q psy14338 1628 GAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALD 1702 (1761)
Q Consensus 1628 ~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~ 1702 (1761)
|+ ++|+||+|||||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++++++.. ...+.++
T Consensus 389 --------G~----l~~~GR~dd~ik~~G~~v~p~eiE~-~l~~~p~V~~~~vv~~~~~~~g~~~~a~v~~~-~~~~~~~ 454 (501)
T 3ipl_A 389 --------GY----VMIYDRRKDLIISGGENIYPYQIET-VAKQFPGISDAVCVGHPDDTWGQVPKLYFVSE-SDISKAQ 454 (501)
T ss_dssp --------SC----EEEEEECCCCEECSSCEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEES-SCCCHHH
T ss_pred --------Ce----EEEEccccceEEECCEEECHHHHHH-HHHhCCCccEEEEEEEecccCCceEEEEEEeC-CCCCHHH
Confidence 99 9999999999999999999999999 8999999999999975 34677777764 4567889
Q ss_pred HHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1703 LVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1703 l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
|+++|+++ || .||+|+.|++++ +||+|+||||||++|++....
T Consensus 455 l~~~l~~~-L~-~~~~P~~i~~v~--~lP~t~~GKi~R~~l~~~~~~ 497 (501)
T 3ipl_A 455 LIAYLSKH-LA-KYKVPKHFEKVD--TLPYTSTGKLQRNKLYREGHH 497 (501)
T ss_dssp HHHHHHHH-SC-GGGSCSEEEECS--SCC------------------
T ss_pred HHHHHHhh-Cc-cccCCCEEEEec--ccCCCCCCCEeHHHHhhcccc
Confidence 99999997 98 999999999999 999999999999999998643
|
| >3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-66 Score=680.37 Aligned_cols=496 Identities=15% Similarity=0.140 Sum_probs=303.2
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCC-----CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTR-----SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGID 1236 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~-----~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~ 1236 (1761)
..++.+.|.+++. ++||++|+++.+.. ..++++||+||+++++++|+.|.+. |+ +||+|+|+++|+++
T Consensus 19 ~~tl~~~l~~~a~-----~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~-g~-~gd~V~i~~~n~~~ 91 (562)
T 3ite_A 19 TVPPSHYIETWAK-----THPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHA-SL-HGRAIAVSLDRSLI 91 (562)
T ss_dssp CCCTTHHHHHHHH-----HCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHT-TC-SSCEEEEECCSCHH
T ss_pred cCCHHHHHHHHHH-----HCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhc-CC-CCCEEEEEeCCCHH
Confidence 3456777777765 77999999964421 1247999999999999999999998 89 79999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccccccc--CCccccCCCC
Q psy14338 1237 LICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKS--WPTILDTDDM 1314 (1761)
Q Consensus 1237 ~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 1314 (1761)
+++++|||+|+|+++|||+|.+|.+ ++.+++++++++++|++...............+.... +......
T Consensus 92 ~~~~~lA~~~~Gav~vpl~~~~~~~------~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 162 (562)
T 3ite_A 92 AFAIIVGIMKSGNTYVPIEAGLPND------RKSFLLRDSRAAMAFVCDNNFDGVELPPETKVLDTKNQSFIENLST--- 162 (562)
T ss_dssp HHHHHHHHHHTTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECTTTTTTCCCCTTCEEEETTCHHHHHHHHH---
T ss_pred HHHHHHHHHHhCCEEEecCCcCHHH------HHHHHHHhcCCCEEEEccccccccccCccceeecccchhhhhhccc---
Confidence 9999999999999999999988777 9999999999999999865432111000000000000 0000000
Q ss_pred ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHH--------cCcCCCCeEEEEeCCccChhHH
Q psy14338 1315 PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA--------CELYPSRHIALCLDPYCGLGFA 1386 (1761)
Q Consensus 1315 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~~~~ 1386 (1761)
...........++++|||+|||||||+||||+++|+++.+.+.++... +.+...++++...++.|+.+.
T Consensus 163 --~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (562)
T 3ite_A 163 --QDTSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHI- 239 (562)
T ss_dssp --SCCSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHH-
T ss_pred --ccccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhH-
Confidence 000111233457889999999999999999999999999988776654 346777788888888887776
Q ss_pred HHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCC
Q psy14338 1387 LWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEE 1466 (1761)
Q Consensus 1387 ~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~ 1466 (1761)
..++.++..|+++++.+. ...+..+.+.++++++|+++++|++++.+.. ...++++||.+++||++
T Consensus 240 ~~~~~~l~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~-----------~~~~~~~lr~~~~gG~~ 305 (562)
T 3ite_A 240 GEMFLAWRFGLCAVTGER---LSMLDDLPRTFRELGVTHAGIVPSLLDQTGL-----------VPEDAPHLVYLGVGGEK 305 (562)
T ss_dssp HHHHHHHHTTCEEEECCH---HHHHHSHHHHHHHTTCCEEEECHHHHHHHTC-----------CGGGSTTCCEEEEESSC
T ss_pred HHHHHHHhcccEEEecch---hhCHHHHHHHHHHcCCCEEEcCHHHHhhccc-----------CccccCceEEEEEecCC
Confidence 678899999999998774 2346788999999999999999999887732 34468899999999999
Q ss_pred CChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccc
Q psy14338 1467 RPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKL 1546 (1761)
Q Consensus 1467 l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p 1546 (1761)
+++ .+.++|.+.+ | ..+++.||+||++..++...... .....++|+|
T Consensus 306 l~~-~~~~~~~~~~---~---~~~~~~YG~TE~~~~~~~~~~~~--------------------------~~~~~~~G~p 352 (562)
T 3ite_A 306 MTP-RTQQIWSSSD---R---VALVNVYGPTEVTIGCSAGRILP--------------------------DSDTRCIGHP 352 (562)
T ss_dssp CCH-HHHHHHTTCS---S---CEEEEEECCGGGCSCSEEEECCT--------------------------TSCTTEEEEE
T ss_pred CCH-HHHHHHhhCC---C---cEEEEeeccchheeeeeeeeecC--------------------------CCCCcccccc
Confidence 999 7777665533 2 68999999999865443211100 0112459999
Q ss_pred cCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCC
Q psy14338 1547 LPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGV 1626 (1761)
Q Consensus 1547 ~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~ 1626 (1761)
+++++++|+|+++++++|.|++|||+|+|+++++|||| +|+.|+..|. ++++||||||+|++ |+
T Consensus 353 ~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~---~p~~t~~~~~-------~g~~w~~TGDlg~~------d~ 416 (562)
T 3ite_A 353 LGDSVAHVLAPGSNEHVKKGMAGELVIEGSLVANGYLN---RPDAKGFCDI-------NGRKMYRTGDIVRM------DA 416 (562)
T ss_dssp CTTCEEEEECTTSSCBCCTTSCEEEEEESTTSCCEESS---CTTCCSEEEE-------TTEEEEEEEEEEEE------CT
T ss_pred CCCCeEEEEeCCCCCCCCCCCceEEEEeccccchhhCC---CccccccccC-------CCCEEEecCCEEEE------cC
Confidence 99999999998888999999999999999999999999 9999886552 45789999999999 99
Q ss_pred CCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhc-cCcceeEEEee-----CCe-EEEEEEeCCCch-
Q psy14338 1627 AGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAH-KKIAECAVFTW-----TNL-LVVVVELDGNES- 1698 (1761)
Q Consensus 1627 d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~-p~V~~a~Vv~~-----~~~-~~a~v~~~~~~~- 1698 (1761)
| |+ |+|+||+|||||++|+||+|.|||+ +|.+| |.|.+++|++. ++. +++++...+...
T Consensus 417 d--------G~----l~~~GR~dd~Ik~~G~~v~p~eIE~-~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~ 483 (562)
T 3ite_A 417 D--------SS----ILFLGRKDEQVKVRGQRLELGEVSE-VIRSLSPTDIDVVTLLLNHPGTSKQFLVSFVASSGAAVR 483 (562)
T ss_dssp T--------SC----EEEEEEC----------------------------------------------------------
T ss_pred C--------Ce----EEEEccccCEEeECcEEECHHHHHH-HHHhcCCCceeEEEEEecCCCCcceEEEEEEeccccccc
Confidence 9 99 9999999999999999999999999 78887 77888888753 233 444444332222
Q ss_pred ------------hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCC-CchhhhHHHHHHHHHcCCCChhh
Q psy14338 1699 ------------EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPIN-SRGEKQRMHLRDGFLADQLDPIY 1756 (1761)
Q Consensus 1699 ------------~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t-~~GKvdR~~L~~~~~~~~~~~~~ 1756 (1761)
..++|+++|+++ || .||+|+.|++++ +||+| ++||+||++|++++.+....+++
T Consensus 484 ~~~~~~~~~~~~~~~~l~~~~~~~-L~-~y~~P~~i~~v~--~lP~t~~~GKi~r~~L~~~~~~~~~~~~~ 550 (562)
T 3ite_A 484 GELRWINENYKEINNSLRQACEQT-LP-AYMVPDFIIPIS--FIPLRDTSAKTDAKALEHMFHTLSLGELF 550 (562)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ccccccccchhhHHHHHHHHHHhh-CC-cccCCcEEEEec--cCCCCCCCCcchHHHHHHHHhccCHHHHh
Confidence 134899999997 98 999999999999 99998 99999999999998765554443
|
| >3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-57 Score=582.94 Aligned_cols=442 Identities=21% Similarity=0.303 Sum_probs=328.5
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECC---CCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCC
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDP---NGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNND 156 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~---~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~ 156 (1761)
..+|.++|+++++++||++|+++.+. .+...+++||+||+++++++|+.|+ +.|+ +||+|+|+++|+
T Consensus 23 ~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~--------~~g~-~gd~V~i~~~n~- 92 (480)
T 3t5a_A 23 VRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELS--------RCGS-TGDRVVISAPQG- 92 (480)
T ss_dssp -CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHT--------TSSC-TTCEEEEECCSS-
T ss_pred cccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHH--------hcCC-CCCEEEEEcCCc-
Confidence 46899999999999999999998762 1222368999999999999999999 8896 999999999999
Q ss_pred chhHHHHHHHHHHhCCeEEecCC---CCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeE
Q psy14338 157 PINFLCAFYGCIFAGIVPVPIEV---PLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWF 233 (1761)
Q Consensus 157 ~~~~vva~lAvlkaG~~~vpldp---~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (1761)
+++++++|||+|+|+++|||++ .++.+ |+.+++++++++++|++......+....... .......+.
T Consensus 93 -~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~-----~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~~~~~ 162 (480)
T 3t5a_A 93 -LEYVVAFLGALQAGRIAVPLSVPQGGVTDE-----RSDSVLSDSSPVAILTTSSAVDDVVQHVARR----PGESPPSII 162 (480)
T ss_dssp -HHHHHHHHHHHHTTCEEEEECSCCSCTTCC-----HHHHHHHHHCCSEEEECTTTHHHHHHTCC----------CCEEE
T ss_pred -HHHHHHHHHHHHhCcEEEeeCCCCccchHH-----HHHHHHHhCCCCEEEeChhHHHHHHHHHhcc----cccccccee
Confidence 9999999999999999999999 66665 8999999999999999987654332211100 000000111
Q ss_pred EeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCC------CCeEEEccCCcch
Q psy14338 234 VTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTE------GENMVCVLDFKRE 307 (1761)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~------~d~~l~~~~~~~~ 307 (1761)
..+................++++|||+|||||||+||||+++|+++.+.+.+....+++.+ +|++++++|++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 242 (480)
T 3t5a_A 163 EVDLLDLDAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHD 242 (480)
T ss_dssp EGGGSCTTCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTST
T ss_pred EecccccccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcCc
Confidence 1122111111222334567899999999999999999999999999999999988888887 9999999999999
Q ss_pred hhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC----CCCCCCCCCceeEEEecC
Q psy14338 308 TGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT----KDHKDISLSSLRLLLVGD 383 (1761)
Q Consensus 308 ~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~----~~~~~~~l~~Lr~v~~gg 383 (1761)
+++...++.+|+.|+++++.++..+.+++..+++.|+++++| +..+|+ ++..++.. ......++++||.+++|
T Consensus 243 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~-~~~~l~~~~~~~~~~~~~~l~~lr~i~~g- 319 (480)
T 3t5a_A 243 MGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPN-FAFELAARRTTDDDMAGRDLGNILTILSG- 319 (480)
T ss_dssp THHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECH-HHHHHHHHHCCTGGGTTCCCTTCCEEEEC-
T ss_pred cHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChH-HHHHHHHhhcCcccccccchhhhheeeec-
Confidence 997656899999999999987432225899999999999999 777875 66555542 34445678999999999
Q ss_pred CCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccc
Q psy14338 384 GANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTL 463 (1761)
Q Consensus 384 ~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1761)
|++++++++++|.+.++..|++...++|.||+||++.+++........... .+....+..+.. ...........
T Consensus 320 -G~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~--~~~~~~~~~~~ 393 (480)
T 3t5a_A 320 -SERVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETV---DFDTESLSAGHA--KPCAGGGATSL 393 (480)
T ss_dssp -CTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEE---EECHHHHHTTBC--CCCCSSSCEEE
T ss_pred -CCcCCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceE---EecHHHhccCce--eecCCCCccee
Confidence 999999999999999865444444699999999999877654421100000 000000000000 00000012356
Q ss_pred cccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEE
Q psy14338 464 QDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFL 543 (1761)
Q Consensus 464 ~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~ 543 (1761)
.++|+|++ ++++|+|+++. .+||.|++|||+|+|+++++||||+|++|+++|..+++.+.. ..+++|||||||+|++
T Consensus 394 ~~~G~p~~-~~~~ivd~~~g-~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~-~~~~~~w~~TGDlg~~ 470 (480)
T 3t5a_A 394 ISYMLPRS-PIVRIVDSDTC-IECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSP-GTPEGPWLRTGDSGFV 470 (480)
T ss_dssp ECEECCSS-SEEEEEETTTT-EECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCT-TCCCCCBEEEEEEEEE
T ss_pred eecCcccC-CEEEEEcCCCC-cCCCCCCEEEEEEeCCccccccccCcchhHHHHhhhhccccC-CCCCCCeeeccceeeE
Confidence 79999999 99999998843 369999999999999999999999999999999866654321 0124789999999999
Q ss_pred eCCCeEEEEec
Q psy14338 544 GPGGLVFVCGS 554 (1761)
Q Consensus 544 ~~dG~l~~~GR 554 (1761)
+ ||+|+|+||
T Consensus 471 d-dG~l~~~GR 480 (480)
T 3t5a_A 471 T-DGKMFIIGR 480 (480)
T ss_dssp E-TTEEEECC-
T ss_pred E-CCEEEEeCC
Confidence 7 999999998
|
| >3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-55 Score=561.49 Aligned_cols=440 Identities=20% Similarity=0.274 Sum_probs=338.2
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCC----CCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTR----SAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGI 1235 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~----~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~ 1235 (1761)
....++++.|.+++. ++||++|+++.+.. ...+++||+||+++++++|++|++. |+ +||+|+|+++|++
T Consensus 21 ~~~~tl~~~l~~~a~-----~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-g~-~gd~V~i~~~n~~ 93 (480)
T 3t5a_A 21 MSVRSLPAALRACAR-----LQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRC-GS-TGDRVVISAPQGL 93 (480)
T ss_dssp ---CCHHHHHHHHHH-----HSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTS-SC-TTCEEEEECCSSH
T ss_pred CCcccHHHHHHHHHH-----hCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhc-CC-CCCEEEEEcCCcH
Confidence 345677888887775 77999999975421 1228999999999999999999999 86 9999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeCCC---CCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhcccccc----ccccCCcc
Q psy14338 1236 DLICAFYGCLYVGAVPVTIRP---PHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVV----DIKSWPTI 1308 (1761)
Q Consensus 1236 ~~iva~lA~l~aG~~~vpldp---~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~----~~~~~~~~ 1308 (1761)
++++++|||+++|+++|||+| .+|.+ ++.+++++++++++|++......+......... ....+...
T Consensus 94 e~~~~~lA~~~~G~v~vpl~~~~~~~~~~------~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (480)
T 3t5a_A 94 EYVVAFLGALQAGRIAVPLSVPQGGVTDE------RSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDLL 167 (480)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCCSCTTCC------HHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEGGGS
T ss_pred HHHHHHHHHHHhCcEEEeeCCCCccchHH------HHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEeccc
Confidence 999999999999999999999 56666 999999999999999998876655443211000 00000000
Q ss_pred ccCCCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCC------CCeEEEEeCCccC
Q psy14338 1309 LDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYP------SRHIALCLDPYCG 1382 (1761)
Q Consensus 1309 ~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~------~d~~~~~~~~~~~ 1382 (1761)
... ...........++++|||+|||||||+||||+++|+++.+.+.+....+++.+ +|+++.++|++|+
T Consensus 168 -~~~----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 242 (480)
T 3t5a_A 168 -DLD----APNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHD 242 (480)
T ss_dssp -CTT----CC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTST
T ss_pred -ccc----cccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcCc
Confidence 000 01111234567889999999999999999999999999999999999998887 8899999999999
Q ss_pred hhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEe
Q psy14338 1383 LGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVV 1462 (1761)
Q Consensus 1383 ~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~ 1462 (1761)
+++...++.+|+.|+++++.++..+.+++..+++.|+++++| +.++|+++..++.... ........++++||.+++
T Consensus 243 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~---~~~~~~~~~l~~lr~i~~ 318 (480)
T 3t5a_A 243 MGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRT---TDDDMAGRDLGNILTILS 318 (480)
T ss_dssp THHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHC---CTGGGTTCCCTTCCEEEE
T ss_pred cHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhc---Ccccccccchhhhheeee
Confidence 998778899999999999987543335999999999999999 8889998888765321 112345678999999999
Q ss_pred ecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceec
Q psy14338 1463 VAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLE 1542 (1761)
Q Consensus 1463 gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1542 (1761)
|||++++ ++.++|.+.+..+|.....+++.||+||++.+++.............+...+..+....... ....+..+
T Consensus 319 gG~~l~~-~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~ 395 (480)
T 3t5a_A 319 GSERVQA-ATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAG--GGATSLIS 395 (480)
T ss_dssp CCTTCCH-HHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCS--SSCEEEEC
T ss_pred cCCcCCH-HHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCC--CCcceeee
Confidence 9999999 88999999998888877899999999999987776554433333333333222221111100 11234678
Q ss_pred cccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcc---cCCCCCceEeeCceeEEe
Q psy14338 1543 SGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLV---TGNTGELYARTGYLGFLR 1619 (1761)
Q Consensus 1543 iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~---~~~~~~~~yrTGDlg~~~ 1619 (1761)
+|+|++ ++++|+|++++++||.|++|||+|+|+++++|||| +|++|+++|..+++ .+.+++|||||||+|++
T Consensus 396 ~G~p~~-~~~~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~---~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~- 470 (480)
T 3t5a_A 396 YMLPRS-PIVRIVDSDTCIECPDGTVGEIWVHGDNVANGYWQ---KPDESERTFGGKIVTPSPGTPEGPWLRTGDSGFV- 470 (480)
T ss_dssp EECCSS-SEEEEEETTTTEECCTTBCEEEEEESTTSCCCBTT---BHHHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEE-
T ss_pred cCcccC-CEEEEEcCCCCcCCCCCCEEEEEEeCCcccccccc---CcchhHHHHhhhhccccCCCCCCCeeeccceeeE-
Confidence 999999 99999998878999999999999999999999999 99999999975443 33346889999999999
Q ss_pred ccCCCCCCCCCCCCCCCcccceEEEEcc
Q psy14338 1620 RTSPAGVAGAPVPPGVSKLHDAVFVVGA 1647 (1761)
Q Consensus 1620 ~~~~~d~d~~~~~~g~G~~~~~l~~~GR 1647 (1761)
| | |+ |+|+||
T Consensus 471 -----d-d--------G~----l~~~GR 480 (480)
T 3t5a_A 471 -----T-D--------GK----MFIIGR 480 (480)
T ss_dssp -----E-T--------TE----EEECC-
T ss_pred -----E-C--------CE----EEEeCC
Confidence 7 8 99 999998
|
| >4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-50 Score=488.09 Aligned_cols=313 Identities=13% Similarity=0.115 Sum_probs=259.8
Q ss_pred CCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEEEeCCccc
Q psy14338 253 DDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALM 332 (1761)
Q Consensus 253 ~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~ 332 (1761)
.||+|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|++|++. ++.+++.|+++++.++
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~-~~~~l~~g~~~~~~~~--- 111 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGLMM-LVRGMELDWELTVTEP--- 111 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHH-HHHHHHHTCEEEEECC---
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHHHH-HHHHHHhCcEEEecCc---
Confidence 478999999999999999999999999999999999999999999999999999999986 9999999999999875
Q ss_pred cCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHHhhhCCCCCCcccc
Q psy14338 333 KVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICP 412 (1761)
Q Consensus 333 ~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n 412 (1761)
..++ ++.|+++++|++.++| +++..++..... ..++++||.+++| |+++++++.++|.+. |++ ++|
T Consensus 112 ~~~~---~~~i~~~~~t~~~~~P-~~l~~ll~~~~~-~~~l~~lr~v~~g--G~~l~~~~~~~~~~~----~~~---~~~ 177 (358)
T 4gs5_A 112 TANP---LAGLDHADFDFVAMVP-MQLQSILENSAT-SGQVDRLGKVLLG--GAPVNHALAMQISDL----AMP---VYQ 177 (358)
T ss_dssp CSCT---TTTCSSCCCSEEEECH-HHHHHHHHCTTT-GGGGGGGCSEEEC--SSCCCHHHHHHHHTC----SSC---EEE
T ss_pred cccH---HHHHHHhCCeEEEcCh-HHHHHhhccccc-cccCCcceEEEEc--ccCCCchheeccccc----Cce---EEe
Confidence 3333 5678899999999996 588888776543 4578999999999 999999999998764 554 999
Q ss_pred ccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCCCCcccCCCCCc
Q psy14338 413 CASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEV 492 (1761)
Q Consensus 413 ~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~ 492 (1761)
.||+||++..++..+.. ....+.+|.|.||+++.+ ++.
T Consensus 178 ~YG~TEt~~~~~~~~~~------------------------------~~~~g~~~~~~pgv~~~~------------~~~ 215 (358)
T 4gs5_A 178 SYGMTETVSHVALKALN------------------------------GPEASELYVFLPGIQYGV------------DER 215 (358)
T ss_dssp EEECGGGSSEEEEEECS------------------------------STTCCSCEEECTTCEEEE------------CTT
T ss_pred ccccccccceeeccccc------------------------------ccccceeeccCCCeEEEe------------cCc
Confidence 99999998766644321 122456788888877665 334
Q ss_pred eEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeEEECCcccChHHHH
Q psy14338 493 GEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDII 572 (1761)
Q Consensus 493 GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE 572 (1761)
|||+++|+.. .++||||||+|++|+|| ++|+||+|||||++|+||+|.|||
T Consensus 216 Gel~~~g~~~----------------------------~~g~~~TGDlg~~d~~g-~~~~GR~dd~Ik~~G~~v~p~eIE 266 (358)
T 4gs5_A 216 GCLHISGAVT----------------------------NGQTVQTNDLVEIHGNA-FQWIGRADNVINSGGVKIVLDQID 266 (358)
T ss_dssp SEEEEESGGG----------------------------TTCCEEEEEEEEECSSE-EEEEEEGGGEEEETTEEEEHHHHH
T ss_pred CceEEecccc----------------------------cCcceecCCccccccCc-eEEcccccCeEEECCEEECHHHHH
Confidence 8888887521 27899999999999888 778899999999999999999999
Q ss_pred HHHH---hcCCccccccceEEEE-EEec-CCCceEEEEEEeCCC-CCHHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCC
Q psy14338 573 ATVL---AVEPMKFIYRGRIAVF-SIRV-LRDERICVIAEQRPD-CSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNY 646 (1761)
Q Consensus 573 ~~l~---~~~~v~~~~~~~a~v~-~~~~-~~~~~l~a~v~~~~~-~~~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~ 646 (1761)
+.|. .++.| .+|+|+ +.++ ..++.++|+++.... ...++++++|+++||.||+|+.| +.+++
T Consensus 267 ~~l~~~~~~p~V-----~~a~vv~~~~d~~~ge~~~a~v~~~~~~~~~~~l~~~l~~~L~~~~~P~~i-------~~v~~ 334 (358)
T 4gs5_A 267 QRIAAVFHHLNI-----GNAFFCWWEPDAKLGQKLVLVIENAMPEALTERLTAEIRSRVSTYENPKHI-------YFAKA 334 (358)
T ss_dssp HHHHHHHHHHTC-----CCCEEEEEEEETTTEEEEEEEEESCCCHHHHHHHHHHHHHHSCGGGSCSCE-------EEESS
T ss_pred HHHHHhccCCCc-----cEEEEEEecCCccCCEEEEEEEECCCCCcCHHHHHHHHHhhCCCCCCceEE-------EEECC
Confidence 8764 46677 466555 5665 467889999887654 45678999999999999999987 44599
Q ss_pred ccCCCCCcccHHHHHHHHHc
Q psy14338 647 LPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 647 lP~t~~GKidR~~L~~~~~~ 666 (1761)
||+|+||||||++|++.+.+
T Consensus 335 lP~t~~GKi~R~~L~~~l~e 354 (358)
T 4gs5_A 335 FAKTQTDKIDKRATFQKLSD 354 (358)
T ss_dssp CCBCTTSCBCHHHHHHHTC-
T ss_pred cCCCCCCChhHHHHHHHhhh
Confidence 99999999999999998754
|
| >4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=468.57 Aligned_cols=310 Identities=14% Similarity=0.083 Sum_probs=257.9
Q ss_pred CCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEEeCCCcc
Q psy14338 1328 AEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 1407 (1761)
Q Consensus 1328 ~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl~~~~~~ 1407 (1761)
.+++|||+|||||||+||||+++|+++.+.+.+....++++++|++++++|++|++|+ ..++.+++.|+++++.++.
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl-~~~~~~l~~g~~~~~~~~~-- 112 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGL-MMLVRGMELDWELTVTEPT-- 112 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEEECCC--
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHH-HHHHHHHHhCcEEEecCcc--
Confidence 4789999999999999999999999999999999999999999999999999998887 5688999999999998752
Q ss_pred ccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHhhCCCCC
Q psy14338 1408 EVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSP 1487 (1761)
Q Consensus 1408 ~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~~~g~~e 1487 (1761)
.+ +++.|+++++|+++++|+++..+++.. ....++++||.+++|||++++ .+.+++.+ .|
T Consensus 113 -~~---~~~~i~~~~~t~~~~~P~~l~~ll~~~--------~~~~~l~~lr~v~~gG~~l~~-~~~~~~~~----~~--- 172 (358)
T 4gs5_A 113 -AN---PLAGLDHADFDFVAMVPMQLQSILENS--------ATSGQVDRLGKVLLGGAPVNH-ALAMQISD----LA--- 172 (358)
T ss_dssp -SC---TTTTCSSCCCSEEEECHHHHHHHHHCT--------TTGGGGGGGCSEEECSSCCCH-HHHHHHHT----CS---
T ss_pred -cc---HHHHHHHhCCeEEEcChHHHHHhhccc--------cccccCCcceEEEEcccCCCc-hheecccc----cC---
Confidence 33 356789999999999999999997742 234468899999999999999 77776654 33
Q ss_pred ccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCCCCCCCc
Q psy14338 1488 RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKGQCGDSH 1567 (1761)
Q Consensus 1488 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~~p~G~ 1567 (1761)
..+++.||+||++..+..... ..+ ..+++|.|.||+++.+.+
T Consensus 173 ~~~~~~YG~TEt~~~~~~~~~----------------------~~~-----~~g~~~~~~pgv~~~~~~----------- 214 (358)
T 4gs5_A 173 MPVYQSYGMTETVSHVALKAL----------------------NGP-----EASELYVFLPGIQYGVDE----------- 214 (358)
T ss_dssp SCEEEEEECGGGSSEEEEEEC----------------------SST-----TCCSCEEECTTCEEEECT-----------
T ss_pred ceEEeccccccccceeecccc----------------------ccc-----ccceeeccCCCeEEEecC-----------
Confidence 579999999998654332110 011 123489999999888743
Q ss_pred ceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcc
Q psy14338 1568 LGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGA 1647 (1761)
Q Consensus 1568 ~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR 1647 (1761)
.|||+++|+. . .+|||||||+|++ |+| | ++|+||
T Consensus 215 ~Gel~~~g~~------~---------------------~~g~~~TGDlg~~------d~~--------g-----~~~~GR 248 (358)
T 4gs5_A 215 RGCLHISGAV------T---------------------NGQTVQTNDLVEI------HGN--------A-----FQWIGR 248 (358)
T ss_dssp TSEEEEESGG------G---------------------TTCCEEEEEEEEE------CSS--------E-----EEEEEE
T ss_pred cCceEEeccc------c---------------------cCcceecCCcccc------ccC--------c-----eEEccc
Confidence 3999998752 1 3689999999999 887 7 667899
Q ss_pred cCCeEEeCCeecChHHHHHHHH---HhccCcceeEEEe-e-----CCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCce
Q psy14338 1648 LDETIMLRGMRYHPIDIENSVM---RAHKKIAECAVFT-W-----TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLI 1718 (1761)
Q Consensus 1648 ~dd~Iki~G~rI~~~eIE~~~l---~~~p~V~~a~Vv~-~-----~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~v 1718 (1761)
+|||||++|+||+|.|||+ +| ..||+|.+|+|+. . ++.++++|+........++|+++|+++ || .||+
T Consensus 249 ~dd~Ik~~G~~v~p~eIE~-~l~~~~~~p~V~~a~vv~~~~d~~~ge~~~a~v~~~~~~~~~~~l~~~l~~~-L~-~~~~ 325 (358)
T 4gs5_A 249 ADNVINSGGVKIVLDQIDQ-RIAAVFHHLNIGNAFFCWWEPDAKLGQKLVLVIENAMPEALTERLTAEIRSR-VS-TYEN 325 (358)
T ss_dssp GGGEEEETTEEEEHHHHHH-HHHHHHHHHTCCCCEEEEEEEETTTEEEEEEEEESCCCHHHHHHHHHHHHHH-SC-GGGS
T ss_pred ccCeEEECCEEECHHHHHH-HHHHhccCCCccEEEEEEecCCccCCEEEEEEEECCCCCcCHHHHHHHHHhh-CC-CCCC
Confidence 9999999999999999998 55 4689999998874 2 357888888776677788999999997 98 9999
Q ss_pred eeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1719 VGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1719 P~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
|+.|++++ +||+|+||||||++|++.+.+
T Consensus 326 P~~i~~v~--~lP~t~~GKi~R~~L~~~l~e 354 (358)
T 4gs5_A 326 PKHIYFAK--AFAKTQTDKIDKRATFQKLSD 354 (358)
T ss_dssp CSCEEEES--SCCBCTTSCBCHHHHHHHTC-
T ss_pred ceEEEEEC--CcCCCCCCChhHHHHHHHhhh
Confidence 99999999 999999999999999998744
|
| >2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=469.24 Aligned_cols=400 Identities=13% Similarity=0.118 Sum_probs=293.0
Q ss_pred CeEEecCCCCCcCcc-----------chhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEeccccC
Q psy14338 172 IVPVPIEVPLTRRDA-----------GSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAK 240 (1761)
Q Consensus 172 ~~~vpldp~~p~~~~-----------~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1761)
.+++|++|.++.++. ..+|++++++.+..+..+..+...+. ......+..+.++..+.....+.+..
T Consensus 3 ~~~~p~~p~~~~~~~~~~~~~~~~~~q~~~l~~~l~~a~~~~~~y~~~~~~~--~~~~~~i~~~~dl~~lP~~~~~~l~~ 80 (443)
T 2y4o_A 3 HMTHPTHPAAALEPIETASRDELQALQLERLKWSLRHAYDNVPHYRRTFDAA--GVHPDDLKSLADLAKFPFSTKNDLRD 80 (443)
T ss_dssp ------CCTTSCCGGGGCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH--TCCGGGCCSGGGGGGSCCBCHHHHHT
T ss_pred CcCCCCCccccCcccccCCHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHc--CCChhhCCCHHHHHHCCCCcHHHHHh
Confidence 468999999985531 22467888887766665554432211 00000010111111111111122211
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHH---HcCCCCCCeEEEccCCc-chhhhHHHHHH
Q psy14338 241 TPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ---ACHYTEGENMVCVLDFK-RETGLWHSVLT 316 (1761)
Q Consensus 241 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~-~~~~~~~~i~~ 316 (1761)
..+ .......+++++||+|||||||+||||+++|+++.+.+.+... .++++++|++++++|+. |..++. .++.
T Consensus 81 ~~p--~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~ 157 (443)
T 2y4o_A 81 NYP--FGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLG-IHYG 157 (443)
T ss_dssp TTT--TTTCSSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHH-HHHH
T ss_pred hCC--CcccCCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHH-HHHH
Confidence 111 1123457799999999999999999999999999877655443 67899999999999994 666666 4899
Q ss_pred HHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCC--CCCceeEEEecCCCccCCHHHHH
Q psy14338 317 SVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDI--SLSSLRLLLVGDGANPWSLSSCD 394 (1761)
Q Consensus 317 ~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~--~l~~Lr~v~~gg~Ge~l~~~~~~ 394 (1761)
++..|+++++.+ .+++..+++.|+++++|+++++| +++..++........ .+++||.+++| ||++++++.+
T Consensus 158 ~~~~G~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~P-s~~~~l~~~~~~~~~~~~~~~lr~i~~g--Ge~l~~~~~~ 230 (443)
T 2y4o_A 158 AERLGCMVVPMS----GGQTEKQVQLIRDFEPKIILVTP-SYMLNLIDEMVRQGMDPAESSLKIGIFG--AEPWTQALRN 230 (443)
T ss_dssp HHHHTCEEECCC----SCCHHHHHHHHHHHCCSEEEECH-HHHHHHHHHHHHTTCCGGGSSCCEEEEE--SSCCCHHHHH
T ss_pred HHHcCCEEEECC----CCCHHHHHHHHHHhCCcEEEECH-HHHHHHHHHHHHcCCCcccCCceEEEEC--CCcCCHHHHH
Confidence 999999999887 56899999999999999999996 477777654222222 24799999999 9999999999
Q ss_pred HHHHHhhhCCCCCCccccccccccccc--eEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCC
Q psy14338 395 QFLSVFQSKGLRPDAICPCASSSECLT--VSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPG 472 (1761)
Q Consensus 395 ~~~~~~~~~g~~~~~l~n~YG~TE~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~ 472 (1761)
+|.+.+ |++ ++|.||+||++. ++...+. .....+.|.++
T Consensus 231 ~~~~~~---g~~---v~~~YG~TE~~g~~~~~~~~~---------------------------------~~~g~~~~~~~ 271 (443)
T 2y4o_A 231 EVETRV---GID---ALDIYGLSEVMGPGVACECVE---------------------------------TKDGPVIWEDH 271 (443)
T ss_dssp HHHHHH---TCE---EEEEEEETTTTEEEEEEECTT---------------------------------TCCSEEECTTT
T ss_pred HHHHHh---CcC---EEeccCchhhcCCeEEeccCC---------------------------------CCCceEEccCC
Confidence 999988 553 999999999853 2221110 01014446789
Q ss_pred cEEEEEeCC-CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCC-CeE-
Q psy14338 473 CIMTVVKMD-SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPG-GLV- 549 (1761)
Q Consensus 473 ~~~~I~d~~-~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~d-G~l- 549 (1761)
+.++|+|++ ++ ++|.|+.|||+|+| +|++.|. .+||||||+|++++| |.+
T Consensus 272 ~~~~i~d~~~g~--~~~~G~~Gel~v~~------------~t~~~~p-------------~~~y~TGDl~~~~~~cG~~~ 324 (443)
T 2y4o_A 272 FYPEIIDPVTGE--VLPDGSQGELVFTS------------LTKEAMP-------------VIRYRTRDLTALLPPTARAM 324 (443)
T ss_dssp EEEEEECTTTCC--BCCTTCCEEEEEEE------------SSCSSSC-------------CSSEEEEEEECEECCSSSSS
T ss_pred eEEEEEcCCCCC--CCCCCCceEEEEeC------------CCcccCh-------------hheeecCCEEEEcCCCCCCc
Confidence 999999965 65 69999999999998 3555562 689999999999999 997
Q ss_pred ----EEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCC--C-----CCHHHH
Q psy14338 550 ----FVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRP--D-----CSEEES 617 (1761)
Q Consensus 550 ----~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~--~-----~~~~~l 617 (1761)
+|+||+||+||++|+||+|.|||++|.+++.| .+++|+++++ ..++.++++++..+ + .+.+++
T Consensus 325 ~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V-----~~~~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~l 399 (443)
T 2y4o_A 325 RRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLL-----SGQFQITLSRDGHMDRLDLAVELRSEAAASVTDGERAAL 399 (443)
T ss_dssp CEECCCCEESSCCEEETTEEECHHHHHHHHHTSTTE-----EEEEEEEEEEETTEEEEEEEEEECHHHHTTCCHHHHHHH
T ss_pred cccCccccccCCeEEECCEEECHHHHHHHHHhCcCc-----CccEEEEEecCCCCceEEEEEEECCcccccchhhHHHHH
Confidence 89999999999999999999999999998887 6888888774 35678999998865 2 345789
Q ss_pred HHHHHHHHHHhh-hcceeeeeEEEEeCCCCccCCCCCcccHHH
Q psy14338 618 FQWMSRVLQAVD-SIHQVGLYCLALVPPNYLPKTPLGGIHLSE 659 (1761)
Q Consensus 618 ~~~l~~~Lp~y~-~P~~i~~~~v~~v~~~~lP~t~~GKidR~~ 659 (1761)
+++|+++|+.|| +|..+ .|+.+++||+|+|||++|+.
T Consensus 400 ~~~l~~~l~~~~~~p~~v-----~~v~~~~lP~t~~GKi~r~~ 437 (443)
T 2y4o_A 400 ARELQHRIKTMVGVSSGV-----TVLAAGGIPATATGKARRVI 437 (443)
T ss_dssp HHHHHHHHHHHTCCCCEE-----EEECTTCSCCCTTSCCCSEE
T ss_pred HHHHHHHHHHHhCCceEE-----EEeCCCcccCccCCcceEEE
Confidence 999999999996 88765 57777899999999999974
|
| >3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-45 Score=457.76 Aligned_cols=325 Identities=13% Similarity=0.107 Sum_probs=261.5
Q ss_pred CCCC-CCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH---HHcCCCCCCeEEEccCCcchhhhHHHHHHHHhcCcEEE
Q psy14338 250 RLTD-DTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT---QACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAV 325 (1761)
Q Consensus 250 ~~~~-~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~~G~~lv 325 (1761)
...+ ++++||+|||||||+||||+++|+++.+.+.+.. ..++++++|++++++|+.|..+.+..++.++..|++++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 160 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTV 160 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEE
Confidence 3456 8999999999999999999999999988776653 34589999999999999765555545889999999999
Q ss_pred EeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCC--CCCceeEEEecCCCccCCHHHHHHHHHHhhhC
Q psy14338 326 YIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDI--SLSSLRLLLVGDGANPWSLSSCDQFLSVFQSK 403 (1761)
Q Consensus 326 i~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~--~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~ 403 (1761)
+.+ ..++..+++.|+++++|+++++| +++..++........ .+++||.+++| ||++++++.++|.+.+
T Consensus 161 ~~~----~~~~~~~~~~i~~~~~t~~~~~P-~~~~~l~~~~~~~~~~~~~~~lr~i~~g--Ge~l~~~~~~~~~~~~--- 230 (436)
T 3qov_A 161 PAA----AGNSKRQIKFISDFKTTALHAIP-SYAIRLAEVFQEEGIDPRETTLKTLVIG--AEPHTDEQRRKIERML--- 230 (436)
T ss_dssp CCC----SCCHHHHHHHHHHHTCCEEECCH-HHHHHHHHHHHHTTCCTTSSSCCEEEEE--SSCCCHHHHHHHHHHH---
T ss_pred eCC----CCCHHHHHHHHHHHCCCEEEECH-HHHHHHHHHHHHcCCCcccCCccEEEEe--CCcCCHHHHHHHHHHh---
Confidence 987 56899999999999999999996 477777664322222 37899999999 9999999999999998
Q ss_pred CCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe-CCC
Q psy14338 404 GLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK-MDS 482 (1761)
Q Consensus 404 g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~~ 482 (1761)
|++ ++|.||+||++..++..... ....+|.|.+++.++|+| +++
T Consensus 231 g~~---v~~~YG~TE~~~~~~~~~~~--------------------------------~~~g~~~~~~~~~v~i~d~~~g 275 (436)
T 3qov_A 231 NVK---AYNSFGMTEMNGPGVAFECQ--------------------------------EQNGMHFWEDCYLVEIIDPETG 275 (436)
T ss_dssp TSE---EEEEEEEGGGTEEEEEEECT--------------------------------TCSSEEECTTTEEEEEECTTTC
T ss_pred Ccc---EEecCcchhhcCCeeEEecC--------------------------------CCCeeEEccCceEEEEEECCCC
Confidence 553 99999999996442211100 012366778899999999 556
Q ss_pred CcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC------e---EEEEe
Q psy14338 483 PSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG------L---VFVCG 553 (1761)
Q Consensus 483 ~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG------~---l~~~G 553 (1761)
+ ++|.|+.|||+|+| .|++.|. .+||||||+|++++|| + ++|+|
T Consensus 276 ~--~~~~g~~Gel~v~~------------~~~~~~~-------------~~~y~TGDl~~~~~~gc~cG~~~~~il~i~G 328 (436)
T 3qov_A 276 E--PVPEGEIGELVLTT------------LDREMMP-------------LIRYRTRDLTRILPGKCPCGRTHLRIDRIKG 328 (436)
T ss_dssp S--BCSTTCCEEEEEEE------------SSCCSSC-------------CCSEEEEEEECEECSCCTTCCCSCEECCCCC
T ss_pred C--CCCCCCceEEEEec------------cCcCCce-------------EEEEEcCCEEEEcCCCCCCCCCccccCcccC
Confidence 5 69999999999998 3455552 7899999999999998 5 69999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCC--C----HHHHHHHHHHHHH
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDC--S----EEESFQWMSRVLQ 626 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~--~----~~~l~~~l~~~Lp 626 (1761)
|+||+||++|+||+|.|||++|.+++.| .+++|++.++ ..++.++++|++. +. + .+++++++++.|+
T Consensus 329 R~dd~ik~~G~~v~p~eiE~~l~~~p~v-----~~~~vv~~~~~~~~~~l~a~v~~~-~~~~~~~~~~~~l~~~l~~~l~ 402 (436)
T 3qov_A 329 RSDDMFIIKGVNIFPMQVEKILVQFPEL-----GSNYLITLETVNNQDEMIVEVELS-DLSTDNYIELEKIRRDIIRQLK 402 (436)
T ss_dssp BSSSCEEETTEEECHHHHHHHHTTCTTE-----EEEEEEEEEEETTEEEEEEEEEEC-TTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEECCEEECHHHHHHHHHhCcCc-----CCcEEEEEEcCCCCcEEEEEEEEc-CccccchhhHHHHHHHHHHHHH
Confidence 9999999999999999999999998888 6888888874 4678899999988 43 2 5789999999999
Q ss_pred Hh-hhcceeeeeEEEEeCCCCccCCCCCcccHH
Q psy14338 627 AV-DSIHQVGLYCLALVPPNYLPKTPLGGIHLS 658 (1761)
Q Consensus 627 ~y-~~P~~i~~~~v~~v~~~~lP~t~~GKidR~ 658 (1761)
.| ++|..+ .|+..++||+|+ ||++|.
T Consensus 403 ~~~~~p~~i-----~~v~~~~lP~t~-GKi~R~ 429 (436)
T 3qov_A 403 DEILVTPKV-----KLVKKGSLPQSE-GKAVRV 429 (436)
T ss_dssp HHHSSCCEE-----EEECTTCCC--------CE
T ss_pred HhcCCceEE-----EEeCCCcccCcC-CcceEE
Confidence 99 899876 567666999999 999986
|
| >2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=457.38 Aligned_cols=326 Identities=15% Similarity=0.160 Sum_probs=266.2
Q ss_pred CCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH---HHcCCCCCCeEEEccCC-cchhhhHHHHHHHHhcCcEEE
Q psy14338 250 RLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT---QACHYTEGENMVCVLDF-KRETGLWHSVLTSVLNGMHAV 325 (1761)
Q Consensus 250 ~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~~~-~~~~~~~~~i~~~L~~G~~lv 325 (1761)
...+++++||+|||||||+||||+++|+++.+.+.+.. ..++++++|++++++|+ .|..++.. ++.++..|++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~G~~~~ 164 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGA-HYGAERAGLTVI 164 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHH-HHHHHHTTCEEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHH-HHHHHHcCCEEE
Confidence 45679999999999999999999999999987765443 36789999999999999 57777764 899999999999
Q ss_pred EeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCC--CCCceeEEEecCCCccCCHHHHHHHHHHhhhC
Q psy14338 326 YIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDI--SLSSLRLLLVGDGANPWSLSSCDQFLSVFQSK 403 (1761)
Q Consensus 326 i~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~--~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~~~~~ 403 (1761)
+.+ .+++..+++.|+++++|+++++| +++..++........ .+++||.+++| |+++++++.++|.+.+
T Consensus 165 ~~~----~~~~~~~~~~i~~~~~t~l~~~P-s~~~~l~~~~~~~~~~~~~~~lr~i~~g--Ge~l~~~~~~~~~~~~--- 234 (437)
T 2y27_A 165 PFG----GGQTEKQVQLIQDFRPDIIMVTP-SYMLSIADEIERQGLDPVQSSLRIGIFG--AEPWTNDMRVAIEQRM--- 234 (437)
T ss_dssp CCC----SCCHHHHHHHHHHHCCSEEEECH-HHHHHHHHHHHHTTCCGGGSSCCEEEEE--SSCCCHHHHHHHHHHH---
T ss_pred eCC----CCCHHHHHHHHHHhCCCEEEECH-HHHHHHHHHHHHcCCCcccCCeeEEEEc--CccCCHHHHHHHHHHH---
Confidence 877 56899999999999999999996 477777654321122 24799999999 9999999999999888
Q ss_pred CCCCCccccccccccccce-EeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEeCC-
Q psy14338 404 GLRPDAICPCASSSECLTV-SVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMD- 481 (1761)
Q Consensus 404 g~~~~~l~n~YG~TE~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~- 481 (1761)
|++ ++|.||+||++.. ....... ....+|.|.+++.++|+|++
T Consensus 235 g~~---v~~~YG~TE~~g~~~~~~~~~--------------------------------~~~g~~~~~~~~~~~i~d~~~ 279 (437)
T 2y27_A 235 GID---AVDIYGLSEVMGPGVASECVE--------------------------------TKDGPTIWEDHFYPEIIDPET 279 (437)
T ss_dssp TSE---EEEEEEETTTTEEEEEECCTT--------------------------------TCSSCEECTTTEEEEEECTTT
T ss_pred CcC---EEecCCchhhcCCeeEEecCC--------------------------------CCCceeEccCceEEEEEcCCC
Confidence 553 9999999998432 2221100 01124557789999999975
Q ss_pred CCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC-CCeE-----EEEecc
Q psy14338 482 SPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP-GGLV-----FVCGSR 555 (1761)
Q Consensus 482 ~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~-dG~l-----~~~GR~ 555 (1761)
++ ++|.|+.|||+|+| +|+++|. .+||||||+|++++ ||++ +|+||+
T Consensus 280 g~--~~~~g~~Gel~v~~------------~t~~~~~-------------~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~ 332 (437)
T 2y27_A 280 GE--VLPDGELGELVFTS------------LTKEALP-------------IIRYRTRDLTRLLPGTARTMRRMEKITGRS 332 (437)
T ss_dssp CC--BCCTTCCEEEEEEE------------SSCSSSC-------------CCSEEEEEEECEECCSSSSSCEECCCCEEG
T ss_pred CC--CCCCCCccEEEEec------------CCcCCch-------------hheeecCCEEEEeCCCCCCccccCcccccc
Confidence 54 69999999999998 3555662 68999999999999 6996 999999
Q ss_pred CCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCC-----CHHHHHHHHHHHHHHhh
Q psy14338 556 DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDC-----SEEESFQWMSRVLQAVD 629 (1761)
Q Consensus 556 d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~-----~~~~l~~~l~~~Lp~y~ 629 (1761)
||+||++|++|+|.|||++|.+++.| .+++|+++++ ..++.++++|++.++. +.++++++|+++|+.|+
T Consensus 333 ~d~i~~~G~~v~p~eiE~~l~~~p~V-----~~~~vv~~~~~~~~~~l~a~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 407 (437)
T 2y27_A 333 DDMMIVRGVNVFPTQIEEQLLKQRAL-----APHYQIVLTKEGPLDVLTLNVEPCPETAPDTAAIQVAKQALAYDIKSLI 407 (437)
T ss_dssp GGCEEETTEEECHHHHHHHHTTCTTB-----CSCCEEEEEEETTEEEEEEEECBCTTTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCeEECHHHHHHHHHhCcCc-----CccEEEEEeecCCCceEEEEEEECCCccchhhhHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998887 5788887774 4578899999987653 34789999999999996
Q ss_pred -hcceeeeeEEEEeCCCCccCCCCCcccHHH
Q psy14338 630 -SIHQVGLYCLALVPPNYLPKTPLGGIHLSE 659 (1761)
Q Consensus 630 -~P~~i~~~~v~~v~~~~lP~t~~GKidR~~ 659 (1761)
+|..+ .|+.+++||+|+ ||++|+.
T Consensus 408 ~~p~~v-----~~v~~~~lP~t~-GKi~r~~ 432 (437)
T 2y27_A 408 GVTAVI-----NVLPVNGIERSV-GKARRVV 432 (437)
T ss_dssp CCCEEE-----EECCTTCSCCCS-SSCCCEE
T ss_pred CCceEE-----EEeCCCCccCCC-CcceEEE
Confidence 88775 466668999999 9999974
|
| >3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=444.78 Aligned_cols=333 Identities=14% Similarity=0.118 Sum_probs=264.1
Q ss_pred CCC-CCEEEEEeccCCCCCCceEEccHHHHHHHHHHHH---HHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEE
Q psy14338 1326 PTA-EMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 1401 (1761)
Q Consensus 1326 ~~~-~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl 1401 (1761)
..+ ++++||+|||||||.||||+++|+++.+.+.... ..+++.++|+++..+++.|+.+.+..++.++..|+++++
T Consensus 82 ~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 161 (436)
T 3qov_A 82 GDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVP 161 (436)
T ss_dssp SCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEEC
T ss_pred CCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEe
Confidence 455 8899999999999999999999999988776654 345889999999888887777776778889999999998
Q ss_pred eCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHHHHHh
Q psy14338 1402 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFS 1481 (1761)
Q Consensus 1402 ~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~~~~~ 1481 (1761)
.+. +++..+++.|+++++|+++++|+++..|++.... ......+++||.+++|||++++ ++.+++.+.|+
T Consensus 162 ~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~~~lr~i~~gGe~l~~-~~~~~~~~~~g 231 (436)
T 3qov_A 162 AAA----GNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQE-----EGIDPRETTLKTLVIGAEPHTD-EQRRKIERMLN 231 (436)
T ss_dssp CCS----CCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHH-----TTCCTTSSSCCEEEEESSCCCH-HHHHHHHHHHT
T ss_pred CCC----CCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHH-----cCCCcccCCccEEEEeCCcCCH-HHHHHHHHHhC
Confidence 874 5899999999999999999999999999875321 1112237899999999999999 88888988873
Q ss_pred hCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCCCCC
Q psy14338 1482 ALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPETKG 1561 (1761)
Q Consensus 1482 ~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~ 1561 (1761)
..+++.||+||+++.++.... . . . ..+|.|.+++.++|+|+++++
T Consensus 232 ------~~v~~~YG~TE~~~~~~~~~~-~----------------------~-~-----~g~~~~~~~~~v~i~d~~~g~ 276 (436)
T 3qov_A 232 ------VKAYNSFGMTEMNGPGVAFEC-Q----------------------E-Q-----NGMHFWEDCYLVEIIDPETGE 276 (436)
T ss_dssp ------SEEEEEEEEGGGTEEEEEEEC-T----------------------T-C-----SSEEECTTTEEEEEECTTTCS
T ss_pred ------ccEEecCcchhhcCCeeEEec-C----------------------C-C-----CeeEEccCceEEEEEECCCCC
Confidence 579999999998543211000 0 0 0 115777889999999988899
Q ss_pred CCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcccce
Q psy14338 1562 QCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDA 1641 (1761)
Q Consensus 1562 ~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~ 1641 (1761)
++|.|+.|||+|+|.. ++.| ..+||+|||+|++ ++|| |+||+++ +.
T Consensus 277 ~~~~g~~Gel~v~~~~---------------~~~~---------~~~~y~TGDl~~~------~~~g--c~cG~~~--~~ 322 (436)
T 3qov_A 277 PVPEGEIGELVLTTLD---------------REMM---------PLIRYRTRDLTRI------LPGK--CPCGRTH--LR 322 (436)
T ss_dssp BCSTTCCEEEEEEESS---------------CCSS---------CCCSEEEEEEECE------ECSC--CTTCCCS--CE
T ss_pred CCCCCCceEEEEeccC---------------cCCc---------eEEEEEcCCEEEE------cCCC--CCCCCCc--cc
Confidence 9999999999999832 1223 3679999999999 7874 7776632 22
Q ss_pred E-EEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCch----hHhhHHHHHHHHH
Q psy14338 1642 V-FVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNES----EALDLVPLVTNAV 1711 (1761)
Q Consensus 1642 l-~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~----~~~~l~~~l~~~~ 1711 (1761)
+ +|+||+||+||++|+||+|.|||+ +|.+||+|.+++|++. ++.++++|+..+... +.++++++|+++
T Consensus 323 il~i~GR~dd~ik~~G~~v~p~eiE~-~l~~~p~v~~~~vv~~~~~~~~~~l~a~v~~~~~~~~~~~~~~~l~~~l~~~- 400 (436)
T 3qov_A 323 IDRIKGRSDDMFIIKGVNIFPMQVEK-ILVQFPELGSNYLITLETVNNQDEMIVEVELSDLSTDNYIELEKIRRDIIRQ- 400 (436)
T ss_dssp ECCCCCBSSSCEEETTEEECHHHHHH-HHTTCTTEEEEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHH-
T ss_pred cCcccCccCCEEEECCEEECHHHHHH-HHHhCcCcCCcEEEEEEcCCCCcEEEEEEEEcCccccchhhHHHHHHHHHHH-
Confidence 4 899999999999999999999999 8999999999998874 347888888763222 257899999987
Q ss_pred hhhcC-ceeeEEEEECCCCccCCCchhhhHH
Q psy14338 1712 LEEHH-LIVGVAVVVDPGVVPINSRGEKQRM 1741 (1761)
Q Consensus 1712 Lp~~~-~vP~~i~~v~~~~lP~t~~GKvdR~ 1741 (1761)
|+ .| ++|..+.+++.++||+|+ ||++|.
T Consensus 401 l~-~~~~~p~~i~~v~~~~lP~t~-GKi~R~ 429 (436)
T 3qov_A 401 LK-DEILVTPKVKLVKKGSLPQSE-GKAVRV 429 (436)
T ss_dssp HH-HHHSSCCEEEEECTTCCC--------CE
T ss_pred HH-HhcCCceEEEEeCCCcccCcC-CcceEE
Confidence 88 66 999999999888999999 999985
|
| >2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=447.29 Aligned_cols=332 Identities=14% Similarity=0.100 Sum_probs=262.6
Q ss_pred CCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHH---HcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEE
Q psy14338 1325 APTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 1401 (1761)
Q Consensus 1325 ~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl 1401 (1761)
...+++++||+|||||||+||||+++|+++.+.+..... .+++.++|+++..+++.++.+....++.++..|+++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 167 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVP 167 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEEC
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEE
Confidence 356789999999999999999999999999887655443 67889999998888876565555667889999999998
Q ss_pred eCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCC--CCCcceEEEeecCCCChHHHHHHHHHH
Q psy14338 1402 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNI--ALGCVRTCVVVAEERPRIHLTSAFSKL 1479 (1761)
Q Consensus 1402 ~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~--~l~~Lr~v~~gGe~l~~~~l~~~~~~~ 1479 (1761)
.+. +++..+++.|+++++|+++++|+++..|++... .... .+++||.+++|||++++ .+.+++.+.
T Consensus 168 ~~~----~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~-------~~~~~~~~~~lr~i~~gGe~l~~-~~~~~~~~~ 235 (443)
T 2y4o_A 168 MSG----GQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMV-------RQGMDPAESSLKIGIFGAEPWTQ-ALRNEVETR 235 (443)
T ss_dssp CCS----CCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHH-------HTTCCGGGSSCCEEEEESSCCCH-HHHHHHHHH
T ss_pred CCC----CCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHH-------HcCCCcccCCceEEEECCCcCCH-HHHHHHHHH
Confidence 874 589999999999999999999999999977431 1222 24789999999999999 888888887
Q ss_pred HhhCCCCCcccccccccccccee-eecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCC
Q psy14338 1480 FSALGLSPRAVSTSFGCRVNIAI-CLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPE 1558 (1761)
Q Consensus 1480 ~~~~g~~e~~i~~~yG~tE~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~ 1558 (1761)
++ ..+++.||+||+++. +..... . .. ...+.|.+++.++|+|++
T Consensus 236 ~g------~~v~~~YG~TE~~g~~~~~~~~--~----------------------~~-----~g~~~~~~~~~~~i~d~~ 280 (443)
T 2y4o_A 236 VG------IDALDIYGLSEVMGPGVACECV--E----------------------TK-----DGPVIWEDHFYPEIIDPV 280 (443)
T ss_dssp HT------CEEEEEEEETTTTEEEEEEECT--T----------------------TC-----CSEEECTTTEEEEEECTT
T ss_pred hC------cCEEeccCchhhcCCeEEeccC--C----------------------CC-----CceEEccCCeEEEEEcCC
Confidence 73 579999999997432 211100 0 00 004556789999999987
Q ss_pred CCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCcc
Q psy14338 1559 TKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKL 1638 (1761)
Q Consensus 1559 ~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~~ 1638 (1761)
+++++|.|+.|||+|+|.. ++.| ..+||+|||+|++ ++| | |+.
T Consensus 281 ~g~~~~~G~~Gel~v~~~t---------------~~~~---------p~~~y~TGDl~~~------~~~-----c--G~~ 323 (443)
T 2y4o_A 281 TGEVLPDGSQGELVFTSLT---------------KEAM---------PVIRYRTRDLTAL------LPP-----T--ARA 323 (443)
T ss_dssp TCCBCCTTCCEEEEEEESS---------------CSSS---------CCSSEEEEEEECE------ECC-----S--SSS
T ss_pred CCCCCCCCCceEEEEeCCC---------------cccC---------hhheeecCCEEEE------cCC-----C--CCC
Confidence 7999999999999999721 1233 2579999999999 655 2 441
Q ss_pred cceE-EEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC------CchhHhhHHHH
Q psy14338 1639 HDAV-FVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG------NESEALDLVPL 1706 (1761)
Q Consensus 1639 ~~~l-~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~------~~~~~~~l~~~ 1706 (1761)
..+| +|+||+||+||++|+||+|.|||+ +|.+||+|.+++|++. ++.++++|+... ...+.++++++
T Consensus 324 ~~~l~~i~GR~~d~i~~~G~~v~p~eiE~-~l~~~p~V~~~~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~l~~~ 402 (443)
T 2y4o_A 324 MRRLAKITGRSDDMLIVRGVNVFPSQIEE-IVVALPLLSGQFQITLSRDGHMDRLDLAVELRSEAAASVTDGERAALARE 402 (443)
T ss_dssp SCEECCCCEESSCCEEETTEEECHHHHHH-HHHTSTTEEEEEEEEEEEETTEEEEEEEEEECHHHHTTCCHHHHHHHHHH
T ss_pred ccccCccccccCCeEEECCEEECHHHHHH-HHHhCcCcCccEEEEEecCCCCceEEEEEEECCcccccchhhHHHHHHHH
Confidence 1112 899999999999999999999999 8999999999888763 347888888753 23456789999
Q ss_pred HHHHHhhhcC-ceeeEEEEECCCCccCCCchhhhHHHH
Q psy14338 1707 VTNAVLEEHH-LIVGVAVVVDPGVVPINSRGEKQRMHL 1743 (1761)
Q Consensus 1707 l~~~~Lp~~~-~vP~~i~~v~~~~lP~t~~GKvdR~~L 1743 (1761)
|+++ |+ .| ++|..+.+++.++||+|+|||++|+..
T Consensus 403 l~~~-l~-~~~~~p~~v~~v~~~~lP~t~~GKi~r~~~ 438 (443)
T 2y4o_A 403 LQHR-IK-TMVGVSSGVTVLAAGGIPATATGKARRVID 438 (443)
T ss_dssp HHHH-HH-HHTCCCCEEEEECTTCSCCCTTSCCCSEEE
T ss_pred HHHH-HH-HHhCCceEEEEeCCCcccCccCCcceEEEe
Confidence 9997 88 55 599988888544999999999999743
|
| >2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=438.15 Aligned_cols=329 Identities=14% Similarity=0.099 Sum_probs=263.1
Q ss_pred CCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHH---HHcCcCCCCeEEEEeCCccChhHHHHHHHHhhcCceEEE
Q psy14338 1325 APTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 1401 (1761)
Q Consensus 1325 ~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~~~vl 1401 (1761)
...++++++|+|||||||+||||+++|+++.+.+.... ..+++.++|+++..+++.++.+....++.++..|+++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 165 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP 165 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEEC
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEe
Confidence 45678999999999999999999999999987765543 367889999998888875555554667889999999998
Q ss_pred eCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCC--CCCcceEEEeecCCCChHHHHHHHHHH
Q psy14338 1402 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNI--ALGCVRTCVVVAEERPRIHLTSAFSKL 1479 (1761)
Q Consensus 1402 ~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~--~l~~Lr~v~~gGe~l~~~~l~~~~~~~ 1479 (1761)
.+. +++..+++.|+++++|+++++|+++..|++... .... .+++||.+++|||++++ .+.+++.+.
T Consensus 166 ~~~----~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~-------~~~~~~~~~~lr~i~~gGe~l~~-~~~~~~~~~ 233 (437)
T 2y27_A 166 FGG----GQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIE-------RQGLDPVQSSLRIGIFGAEPWTN-DMRVAIEQR 233 (437)
T ss_dssp CCS----CCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHH-------HTTCCGGGSSCCEEEEESSCCCH-HHHHHHHHH
T ss_pred CCC----CCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHH-------HcCCCcccCCeeEEEEcCccCCH-HHHHHHHHH
Confidence 774 589999999999999999999999999977431 1222 24789999999999999 888888877
Q ss_pred HhhCCCCCcccccccccccccee-eecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcCC
Q psy14338 1480 FSALGLSPRAVSTSFGCRVNIAI-CLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPE 1558 (1761)
Q Consensus 1480 ~~~~g~~e~~i~~~yG~tE~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~ 1558 (1761)
++ ..+++.||+||+++. +..... . .. ..+|.|.+++.++|+|++
T Consensus 234 ~g------~~v~~~YG~TE~~g~~~~~~~~--~----------------------~~-----~g~~~~~~~~~~~i~d~~ 278 (437)
T 2y27_A 234 MG------IDAVDIYGLSEVMGPGVASECV--E----------------------TK-----DGPTIWEDHFYPEIIDPE 278 (437)
T ss_dssp HT------SEEEEEEEETTTTEEEEEECCT--T----------------------TC-----SSCEECTTTEEEEEECTT
T ss_pred HC------cCEEecCCchhhcCCeeEEecC--C----------------------CC-----CceeEccCceEEEEEcCC
Confidence 73 579999999997432 221110 0 00 014667789999999988
Q ss_pred CCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCC-CCCCCCCCCCc
Q psy14338 1559 TKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGV-AGAPVPPGVSK 1637 (1761)
Q Consensus 1559 ~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~-d~~~~~~g~G~ 1637 (1761)
+++++|.|+.|||+|+|.. ++.| ..+||+|||+|++ ++ | |+
T Consensus 279 ~g~~~~~g~~Gel~v~~~t---------------~~~~---------~~~~y~TGDl~~~------~~~~--------G~ 320 (437)
T 2y27_A 279 TGEVLPDGELGELVFTSLT---------------KEAL---------PIIRYRTRDLTRL------LPGT--------AR 320 (437)
T ss_dssp TCCBCCTTCCEEEEEEESS---------------CSSS---------CCCSEEEEEEECE------ECCS--------SS
T ss_pred CCCCCCCCCccEEEEecCC---------------cCCc---------hhheeecCCEEEE------eCCC--------CC
Confidence 8999999999999999721 1233 3579999999999 77 7 87
Q ss_pred ccceE-EEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCc----hhHhhHHHHH
Q psy14338 1638 LHDAV-FVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE----SEALDLVPLV 1707 (1761)
Q Consensus 1638 ~~~~l-~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~----~~~~~l~~~l 1707 (1761)
....+ +|+||+||+||++|+||+|.|||+ +|.+||+|.+++|++. ++.++++|+..... .+.++++++|
T Consensus 321 ~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~-~l~~~p~V~~~~vv~~~~~~~~~~l~a~v~~~~~~~~~~~~~~~l~~~l 399 (437)
T 2y27_A 321 TMRRMEKITGRSDDMMIVRGVNVFPTQIEE-QLLKQRALAPHYQIVLTKEGPLDVLTLNVEPCPETAPDTAAIQVAKQAL 399 (437)
T ss_dssp SSCEECCCCEEGGGCEEETTEEECHHHHHH-HHTTCTTBCSCCEEEEEEETTEEEEEEEECBCTTTTTCHHHHHHHHHHH
T ss_pred CccccCccccccCCeEEECCeEECHHHHHH-HHHhCcCcCccEEEEEeecCCCceEEEEEEECCCccchhhhHHHHHHHH
Confidence 22223 899999999999999999999999 8999999999888762 35788888875332 4567899999
Q ss_pred HHHHhhhcC-ceeeEEEEECCCCccCCCchhhhHHH
Q psy14338 1708 TNAVLEEHH-LIVGVAVVVDPGVVPINSRGEKQRMH 1742 (1761)
Q Consensus 1708 ~~~~Lp~~~-~vP~~i~~v~~~~lP~t~~GKvdR~~ 1742 (1761)
+++ |+ .| ++|..|.+++.++||+|+ ||++|+.
T Consensus 400 ~~~-l~-~~~~~p~~v~~v~~~~lP~t~-GKi~r~~ 432 (437)
T 2y27_A 400 AYD-IK-SLIGVTAVINVLPVNGIERSV-GKARRVV 432 (437)
T ss_dssp HHH-HH-HHHCCCEEEEECCTTCSCCCS-SSCCCEE
T ss_pred HHH-HH-HhcCCceEEEEeCCCCccCCC-CcceEEE
Confidence 987 88 66 599999998544999999 9999864
|
| >3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=307.85 Aligned_cols=237 Identities=15% Similarity=0.092 Sum_probs=181.3
Q ss_pred CCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH---HHcCCCCCCeEEEccCC-cchhhhHHHHHHHHhcCcEEEE
Q psy14338 251 LTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT---QACHYTEGENMVCVLDF-KRETGLWHSVLTSVLNGMHAVY 326 (1761)
Q Consensus 251 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~~~-~~~~~~~~~i~~~L~~G~~lvi 326 (1761)
..+++++||+|||||||+||||+++|+++.+.+.+.. ..++++++|++++++|+ +|+.++.. .+.++..|+ +++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~-~~~~~~~G~-~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAIN-KERALRLGG-MFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHH-HHHHHHTTS-CEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHH-HHHHHHcCC-EEE
Confidence 4789999999999999999999999999999888654 45678899999999999 99999885 788899999 666
Q ss_pred eCCccccCCHH-----------------------HHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecC
Q psy14338 327 IPYALMKVNPA-----------------------SWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGD 383 (1761)
Q Consensus 327 ~~~~~~~~~~~-----------------------~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg 383 (1761)
+. .++|. .+++.|+++++|++.++| +++..++........++++||.+++|
T Consensus 166 ~~----~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P-s~~~~l~~~~~~~~~~~~~lr~i~~g- 239 (369)
T 3hgu_A 166 SI----DIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTP-PVLRELLKRPEVVLQMKQSLAQITLG- 239 (369)
T ss_dssp CC----CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECH-HHHHHHTTCHHHHHHHHHHCSEEEEE-
T ss_pred Cc----cCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCH-HHHHHHHhhhhhhccccCCeeEEEEC-
Confidence 55 56777 888899999999999996 58888876643333456899999999
Q ss_pred CCccCCHHHHHHHH-HHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCccc
Q psy14338 384 GANPWSLSSCDQFL-SVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLT 462 (1761)
Q Consensus 384 ~Ge~l~~~~~~~~~-~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1761)
||++++++.++|. +.++. + .++|.||+||++.++...+
T Consensus 240 -Ge~l~~~~~~~~~~~~~p~--~---~v~~~YG~TE~~~~~~~~~----------------------------------- 278 (369)
T 3hgu_A 240 -GTELNLDEIKFIASEILPD--C---EFSASYGSTSALGVSRSLL----------------------------------- 278 (369)
T ss_dssp -SSCCCHHHHHHHHHHTCTT--S---EEEEEEEEGGGTEEEEECC-----------------------------------
T ss_pred -CccCCHHHHHHHHHHhCCC--c---EEEcccCchhhhcceeccc-----------------------------------
Confidence 9999999999999 88742 2 4999999999987664322
Q ss_pred ccccCCC------CCCcEEEEEeC-CCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceE
Q psy14338 463 LQDCGQV------MPGCIMTVVKM-DSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYT 535 (1761)
Q Consensus 463 ~~~iG~p------~~~~~~~I~d~-~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~y 535 (1761)
..++|+| +++++++|+|+ +++ ++|.|++|||+|++ ++.+.|. -.|
T Consensus 279 ~~~~G~~~~~~~~~~~~~v~ivD~~~g~--~vp~G~~GEl~vt~------------l~~~~~l--------------~ry 330 (369)
T 3hgu_A 279 ITSESQQVIYDSFSPFITYDVVDSITAQ--TVEYGERGNVIVTH------------LSPWAFY--------------PRV 330 (369)
T ss_dssp BCTTCSSCEEECCTTTEEEEEECTTTCS--BCCTTCEEEEEEEE------------EETTEEE--------------EEE
T ss_pred cccCCCcccccCCCCCeEEEEECCCCCc--CCCCCCceEEEEEE------------cCccccc--------------ccc
Confidence 1158999 99999999998 665 69999999999987 2333342 359
Q ss_pred eecceEEEeCC--C-------eEEEEeccCCeEEECCc
Q psy14338 536 RSGLLGFLGPG--G-------LVFVCGSRDGLMTVTGR 564 (1761)
Q Consensus 536 rTGDl~~~~~d--G-------~l~~~GR~d~qvki~G~ 564 (1761)
+|||++++.+. | .+..++|.|+++||+|.
T Consensus 331 ~tgD~~~~~~~~~g~~~d~~~~v~~~~~~~~~~~i~gv 368 (369)
T 3hgu_A 331 AERDTAIRLPGVSGFAGDRLADIEPLKISEGRKVIEGV 368 (369)
T ss_dssp EEEEEEEEECCSTTCSSCEEEEEEECC-----------
T ss_pred cCCceEEEecCCCCCcCcccccceeccccCCCceeeec
Confidence 99999988642 3 47889999999999985
|
| >3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-27 Score=289.58 Aligned_cols=248 Identities=11% Similarity=0.014 Sum_probs=178.7
Q ss_pred CCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHH---HHcCcCCCCeEEEEeCC-ccChhHHHHHHHHhhcCceEE
Q psy14338 1325 APTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LACELYPSRHIALCLDP-YCGLGFALWVLSSVYSGHHSI 1400 (1761)
Q Consensus 1325 ~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~~L~~G~~~v 1400 (1761)
...++++++|+|||||||+||||+++|+++.+.+.+.. ..+++.++|+++..+|+ +|..++ ...+.++..|+ ++
T Consensus 87 ~~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~-~~~~~~~~~G~-~v 164 (369)
T 3hgu_A 87 GLPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGA-INKERALRLGG-MF 164 (369)
T ss_dssp TSCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHH-HHHHHHHHTTS-CE
T ss_pred cCCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhH-HHHHHHHHcCC-EE
Confidence 34678999999999999999999999999999888654 45678888999999988 666666 45666788999 55
Q ss_pred EeCCCccccCHH-----------------------HHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcc
Q psy14338 1401 LIPPSEVEVNPA-----------------------LWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCV 1457 (1761)
Q Consensus 1401 l~~~~~~~~~~~-----------------------~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~L 1457 (1761)
+... ++|. .+++.|+++++|+++++|+++..|++.. .....++++|
T Consensus 165 ~~~~----~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~-------~~~~~~~~~l 233 (369)
T 3hgu_A 165 FSID----IDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRP-------EVVLQMKQSL 233 (369)
T ss_dssp ECCC----CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCH-------HHHHHHHHHC
T ss_pred ECcc----CChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhh-------hhhccccCCe
Confidence 5543 5777 8888999999999999999999997631 1122456789
Q ss_pred eEEEeecCCCChHHHHHHHH-HHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCC
Q psy14338 1458 RTCVVVAEERPRIHLTSAFS-KLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPH 1536 (1761)
Q Consensus 1458 r~v~~gGe~l~~~~l~~~~~-~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1536 (1761)
|.+++|||++++ ++.+++. +.|+. +.+++.||+||+++++.....
T Consensus 234 r~i~~gGe~l~~-~~~~~~~~~~~p~-----~~v~~~YG~TE~~~~~~~~~~---------------------------- 279 (369)
T 3hgu_A 234 AQITLGGTELNL-DEIKFIASEILPD-----CEFSASYGSTSALGVSRSLLI---------------------------- 279 (369)
T ss_dssp SEEEEESSCCCH-HHHHHHHHHTCTT-----SEEEEEEEEGGGTEEEEECCB----------------------------
T ss_pred eEEEECCccCCH-HHHHHHHHHhCCC-----cEEEcccCchhhhcceecccc----------------------------
Confidence 999999999999 7888888 77632 689999999998765421110
Q ss_pred ccceeccccc------cCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceE
Q psy14338 1537 SLCLLESGKL------LPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYA 1610 (1761)
Q Consensus 1537 ~~~~~~iG~p------~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~y 1610 (1761)
.++|+| +++++++|+|+++++++|.|++|||+|++..-. .| --.|
T Consensus 280 ----~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~~GEl~vt~l~~~---------------~~----------l~ry 330 (369)
T 3hgu_A 280 ----TSESQQVIYDSFSPFITYDVVDSITAQTVEYGERGNVIVTHLSPW---------------AF----------YPRV 330 (369)
T ss_dssp ----CTTCSSCEEECCTTTEEEEEECTTTCSBCCTTCEEEEEEEEEETT---------------EE----------EEEE
T ss_pred ----ccCCCcccccCCCCCeEEEEECCCCCcCCCCCCceEEEEEEcCcc---------------cc----------cccc
Confidence 037898 999999999986799999999999999874211 11 1259
Q ss_pred eeCceeEEeccCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCe
Q psy14338 1611 RTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGM 1657 (1761)
Q Consensus 1611 rTGDlg~~~~~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~ 1657 (1761)
+|||++++.+ ..+| -..+|.+. +..++|.|+++||+|.
T Consensus 331 ~tgD~~~~~~----~~~g-~~~d~~~~----v~~~~~~~~~~~i~gv 368 (369)
T 3hgu_A 331 AERDTAIRLP----GVSG-FAGDRLAD----IEPLKISEGRKVIEGV 368 (369)
T ss_dssp EEEEEEEEEC----CSTT-CSSCEEEE----EEECC-----------
T ss_pred cCCceEEEec----CCCC-CcCccccc----ceeccccCCCceeeec
Confidence 9999999853 3331 11222234 7889999999999985
|
| >3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.3e-12 Score=128.70 Aligned_cols=92 Identities=25% Similarity=0.393 Sum_probs=69.8
Q ss_pred cccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCC----chhHhhHHHHHHHHHhhhcC
Q psy14338 1646 GALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN----ESEALDLVPLVTNAVLEEHH 1716 (1761)
Q Consensus 1646 GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~----~~~~~~l~~~l~~~~Lp~~~ 1716 (1761)
.|.|||||++|+||+|.|||+ +|.+||+|.+++|++. ++.+.++|+.... ....+++.+.++++ +...+
T Consensus 1 srADDmIiv~G~nv~P~eIE~-vl~~~p~v~~~~vv~v~~~~~~~~~~~~V~~~~~~~~~~~~~~~l~~~i~~~-l~~~~ 78 (109)
T 3lax_A 1 SNADDMIILKGVNIFPIQIET-ILLQFKELGSDYLITLETAESNDEMTVEVELSQLFTDDYGRLQALTREITRQ-LKDEI 78 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHH-HHHTCTTEEEEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHH-HHHHH
T ss_pred CCcCEEEEECCEEECHHHHHH-HHHhCCCcccceEEEEeccccceeEEEEEEEeeccccccchhhhhHHHHHHH-HHHHh
Confidence 389999999999999999999 8999999999988864 3467777776422 22345677777776 55455
Q ss_pred ceeeEEEEECCCCccCCCchhhhH
Q psy14338 1717 LIVGVAVVVDPGVVPINSRGEKQR 1740 (1761)
Q Consensus 1717 ~vP~~i~~v~~~~lP~t~~GKvdR 1740 (1761)
.+|..+.++++++||+| +||++|
T Consensus 79 gv~~~v~~v~~~~lPrt-sGKi~R 101 (109)
T 3lax_A 79 LVTPRVKLVPKGALPKS-EGKAVR 101 (109)
T ss_dssp SSCCEEEEECTTCSCCC----CCC
T ss_pred CCccceEEEcCCeecCC-CCCcch
Confidence 67777889987799998 799987
|
| >3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.5e-12 Score=122.43 Aligned_cols=94 Identities=18% Similarity=0.205 Sum_probs=72.5
Q ss_pred eccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCC--C---HHHHHHHHHHHHH
Q psy14338 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDC--S---EEESFQWMSRVLQ 626 (1761)
Q Consensus 553 GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~--~---~~~l~~~l~~~Lp 626 (1761)
.|.|||||++|+||+|.|||++|.+++++ .+++++++++ .+++.++++++..++. + .+++.+.+++.+.
T Consensus 1 srADDmIiv~G~nv~P~eIE~vl~~~p~v-----~~~~vv~v~~~~~~~~~~~~V~~~~~~~~~~~~~~~l~~~i~~~l~ 75 (109)
T 3lax_A 1 SNADDMIILKGVNIFPIQIETILLQFKEL-----GSDYLITLETAESNDEMTVEVELSQLFTDDYGRLQALTREITRQLK 75 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTCTTE-----EEEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEECCEEECHHHHHHHHHhCCCc-----ccceEEEEeccccceeEEEEEEEeeccccccchhhhhHHHHHHHHH
Confidence 48999999999999999999999999888 6888888874 5678888888876652 2 3456677777887
Q ss_pred Hhh-hcceeeeeEEEEeCCCCccCCCCCcccH
Q psy14338 627 AVD-SIHQVGLYCLALVPPNYLPKTPLGGIHL 657 (1761)
Q Consensus 627 ~y~-~P~~i~~~~v~~v~~~~lP~t~~GKidR 657 (1761)
.++ +|..+ .|++.++||+| +||++|
T Consensus 76 ~~~gv~~~v-----~~v~~~~lPrt-sGKi~R 101 (109)
T 3lax_A 76 DEILVTPRV-----KLVPKGALPKS-EGKAVR 101 (109)
T ss_dssp HHHSSCCEE-----EEECTTCSCCC----CCC
T ss_pred HHhCCccce-----EEEcCCeecCC-CCCcch
Confidence 765 44443 57888899998 799987
|
| >4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.8e-06 Score=106.33 Aligned_cols=62 Identities=10% Similarity=0.134 Sum_probs=53.9
Q ss_pred CCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC----CCeEEEEeccCCeEEEC
Q psy14338 487 CKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP----GGLVFVCGSRDGLMTVT 562 (1761)
Q Consensus 487 ~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~----dG~l~~~GR~d~qvki~ 562 (1761)
|..|+.+||+|...+ |+|. ||+||++++.. ...+.|+||.|+++.++
T Consensus 393 Ve~G~~YelViTt~~---GL~R--------------------------Yr~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~ 443 (609)
T 4b2g_A 393 VEVGKEYELVITTYA---GLYR--------------------------YRVGDILRVTGFHNSAPQFHFVRRKNVLLSID 443 (609)
T ss_dssp CCTTCEEEEEEECTT---SCCS--------------------------EEEEEEEEEEEEETTEEEEEEEEETTCCBCSS
T ss_pred cCCCCeEEEehhhhh---hhhh--------------------------eecCCEEEEeecCCCCcEEEEEEecCCeEEcc
Confidence 789999999997642 4432 99999999973 56899999999999999
Q ss_pred CcccChHHHHHHHHh
Q psy14338 563 GRKHNADDIIATVLA 577 (1761)
Q Consensus 563 G~rIe~~eIE~~l~~ 577 (1761)
|++|...+||.++.+
T Consensus 444 Geki~~~~v~~av~~ 458 (609)
T 4b2g_A 444 SDKTDEAELQKAVDN 458 (609)
T ss_dssp SCCBCHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHH
Confidence 999999999999875
|
| >4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=3.2e-06 Score=105.89 Aligned_cols=64 Identities=14% Similarity=0.157 Sum_probs=54.1
Q ss_pred CCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeC----CCeEEEEeccCCeEEEC
Q psy14338 487 CKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGP----GGLVFVCGSRDGLMTVT 562 (1761)
Q Consensus 487 ~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~----dG~l~~~GR~d~qvki~ 562 (1761)
|..|+.+||+|...+ |.|. ||+||++++.. ...+.|+||.|+++.++
T Consensus 381 Ve~G~~YelViTt~~---GL~R--------------------------Yr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~ 431 (581)
T 4eql_A 381 VKLGCTYEPVVTNFA---GLYR--------------------------MRVGDIVLVTGFYNNAPQFKFVRRENVVLSID 431 (581)
T ss_dssp CCTTCEEEEEEECSS---SCCS--------------------------EECCEEEEEEEEETTEEEEEEEEETTEEECSS
T ss_pred cCCCceEEEEEeecc---ceee--------------------------EEcCCEEEEcccCCCCcEEEEEEecCCEEEee
Confidence 778999999998752 3221 99999999985 45799999999999999
Q ss_pred CcccChHHHHHHHHhcC
Q psy14338 563 GRKHNADDIIATVLAVE 579 (1761)
Q Consensus 563 G~rIe~~eIE~~l~~~~ 579 (1761)
|++|...+||++|.+..
T Consensus 432 Gekl~~~~v~~al~~a~ 448 (581)
T 4eql_A 432 SDKTNEEDLFKAVSQAK 448 (581)
T ss_dssp SCCEEHHHHHHHHHHC-
T ss_pred eeECCHHHHHHHHHHHH
Confidence 99999999999998654
|
| >4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.29 E-value=9e-06 Score=101.47 Aligned_cols=63 Identities=14% Similarity=0.068 Sum_probs=53.3
Q ss_pred cCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCC----CeEEEEeccCCeEEE
Q psy14338 486 LCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPG----GLVFVCGSRDGLMTV 561 (1761)
Q Consensus 486 ~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~d----G~l~~~GR~d~qvki 561 (1761)
.|..|+.+||+|...+ |.|. ||+||++++..- ..+.|+||.|+++.+
T Consensus 387 eve~G~~YelviTt~~---GL~R--------------------------Yr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~ 437 (581)
T 4epl_A 387 QVKIGEEYEVVITNYA---GLYR--------------------------YRLGDVVKVIGFYNNTPQLKFICRRNLILSI 437 (581)
T ss_dssp GCCTTCEEEEEEESTT---SCSS--------------------------EEEEEEEEEEEEETTEEEEEEEEETTCCBCS
T ss_pred HcCCCCeEEEEEeecc---ceee--------------------------EEcCCEEEEecccCCCcEEEEEeecCCeEEe
Confidence 3889999999998753 3221 999999999732 469999999999999
Q ss_pred CCcccChHHHHHHHHh
Q psy14338 562 TGRKHNADDIIATVLA 577 (1761)
Q Consensus 562 ~G~rIe~~eIE~~l~~ 577 (1761)
+|+++...+||.++.+
T Consensus 438 ~Ge~~~~~~v~~al~~ 453 (581)
T 4epl_A 438 NIDKNTERDLQLSVES 453 (581)
T ss_dssp SSCCBCHHHHHHHHHH
T ss_pred eeeECCHHHHHHHHHH
Confidence 9999999999998875
|
| >4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} | Back alignment and structure |
|---|
Probab=98.17 E-value=6.3e-06 Score=103.25 Aligned_cols=65 Identities=8% Similarity=0.076 Sum_probs=53.8
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCC--CCCCCCCCCCcc
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGV--AGAPVPPGVSKL 1638 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~--d~~~~~~g~G~~ 1638 (1761)
..|..|+.+||.|+.. .|.|. ||+||++++ +. + .
T Consensus 391 ~eVe~G~~YelViTt~---~GL~R-------------------------Yr~GD~v~v------~~f~~----------~ 426 (609)
T 4b2g_A 391 AHVEVGKEYELVITTY---AGLYR-------------------------YRVGDILRV------TGFHN----------S 426 (609)
T ss_dssp GGCCTTCEEEEEEECT---TSCCS-------------------------EEEEEEEEE------EEEET----------T
T ss_pred hHcCCCCeEEEehhhh---hhhhh-------------------------eecCCEEEE------eecCC----------C
Confidence 4688999999999764 47775 999999999 42 2 2
Q ss_pred cceEEEEcccCCeEEeCCeecChHHHHHHHHH
Q psy14338 1639 HDAVFVVGALDETIMLRGMRYHPIDIENSVMR 1670 (1761)
Q Consensus 1639 ~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~ 1670 (1761)
.+++.|+||.|++|+++|.+|.+.+||. ++.
T Consensus 427 ~p~i~~~gR~~~~l~~~Geki~~~~v~~-av~ 457 (609)
T 4b2g_A 427 APQFHFVRRKNVLLSIDSDKTDEAELQK-AVD 457 (609)
T ss_dssp EEEEEEEEETTCCBCSSSCCBCHHHHHH-HHH
T ss_pred CcEEEEEEecCCeEEccccCCCHHHHHH-HHH
Confidence 2449999999999999999999999999 554
|
| >4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=2.1e-05 Score=98.53 Aligned_cols=66 Identities=11% Similarity=0.013 Sum_probs=53.9
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCC--CCCCCCCCCCcc
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGV--AGAPVPPGVSKL 1638 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~--d~~~~~~g~G~~ 1638 (1761)
..|..|+.+||.|+..+ |-|. ||+||+++. .. + .
T Consensus 379 ~eVe~G~~YelViTt~~---GL~R-------------------------Yr~GD~v~v------~~f~~----------~ 414 (581)
T 4eql_A 379 EDVKLGCTYEPVVTNFA---GLYR-------------------------MRVGDIVLV------TGFYN----------N 414 (581)
T ss_dssp GGCCTTCEEEEEEECSS---SCCS-------------------------EECCEEEEE------EEEET----------T
T ss_pred HHcCCCceEEEEEeecc---ceee-------------------------EEcCCEEEE------cccCC----------C
Confidence 45678999999998753 5554 999999999 43 2 2
Q ss_pred cceEEEEcccCCeEEeCCeecChHHHHHHHHHh
Q psy14338 1639 HDAVFVVGALDETIMLRGMRYHPIDIENSVMRA 1671 (1761)
Q Consensus 1639 ~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~ 1671 (1761)
.+++.|+||.|+++.++|++|...+||. ++.+
T Consensus 415 ~p~i~f~gR~~~~l~~~Gekl~~~~v~~-al~~ 446 (581)
T 4eql_A 415 APQFKFVRRENVVLSIDSDKTNEEDLFK-AVSQ 446 (581)
T ss_dssp EEEEEEEEETTEEECSSSCCEEHHHHHH-HHHH
T ss_pred CcEEEEEEecCCEEEeeeeECCHHHHHH-HHHH
Confidence 3459999999999999999999999999 5553
|
| >4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.02 E-value=0.00011 Score=91.82 Aligned_cols=66 Identities=9% Similarity=-0.008 Sum_probs=54.4
Q ss_pred CCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCCc--c
Q psy14338 1561 GQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSK--L 1638 (1761)
Q Consensus 1561 ~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G~--~ 1638 (1761)
..|..|+.+||.|+..+ |-|. ||+||++++. |. .
T Consensus 386 ~eve~G~~YelviTt~~---GL~R-------------------------Yr~GD~v~v~----------------g~~~~ 421 (581)
T 4epl_A 386 TQVKIGEEYEVVITNYA---GLYR-------------------------YRLGDVVKVI----------------GFYNN 421 (581)
T ss_dssp GGCCTTCEEEEEEESTT---SCSS-------------------------EEEEEEEEEE----------------EEETT
T ss_pred HHcCCCCeEEEEEeecc---ceee-------------------------EEcCCEEEEe----------------cccCC
Confidence 46889999999998753 5554 9999999993 21 2
Q ss_pred cceEEEEcccCCeEEeCCeecChHHHHHHHHHh
Q psy14338 1639 HDAVFVVGALDETIMLRGMRYHPIDIENSVMRA 1671 (1761)
Q Consensus 1639 ~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~ 1671 (1761)
.+++.|+||.|++++++|.++...+||. ++..
T Consensus 422 ~p~~~~~gR~~~~l~~~Ge~~~~~~v~~-al~~ 453 (581)
T 4epl_A 422 TPQLKFICRRNLILSINIDKNTERDLQL-SVES 453 (581)
T ss_dssp EEEEEEEEETTCCBCSSSCCBCHHHHHH-HHHH
T ss_pred CcEEEEEeecCCeEEeeeeECCHHHHHH-HHHH
Confidence 4569999999999999999999999999 5543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1761 | ||||
| d1pg4a_ | 643 | e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en | 2e-33 | |
| d1pg4a_ | 643 | e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en | 7e-29 | |
| d1pg4a_ | 643 | e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en | 4e-09 | |
| d1pg4a_ | 643 | e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en | 3e-06 | |
| d1pg4a_ | 643 | e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en | 7e-05 | |
| d1ry2a_ | 640 | e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast | 1e-30 | |
| d1ry2a_ | 640 | e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast | 4e-24 | |
| d1ry2a_ | 640 | e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast | 9e-09 | |
| d1ry2a_ | 640 | e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast | 3e-07 | |
| d1ry2a_ | 640 | e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast | 1e-04 | |
| d1v25a_ | 534 | e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 | 2e-29 | |
| d1v25a_ | 534 | e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 | 3e-26 | |
| d1v25a_ | 534 | e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 | 4e-10 | |
| d1v25a_ | 534 | e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 | 2e-06 | |
| d1v25a_ | 534 | e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 | 1e-05 | |
| d1lcia_ | 541 | e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali | 1e-28 | |
| d1lcia_ | 541 | e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali | 5e-26 | |
| d1lcia_ | 541 | e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali | 1e-09 | |
| d1lcia_ | 541 | e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali | 2e-06 | |
| d1amua_ | 514 | e.23.1.1 (A:) Phenylalanine activating domain of g | 4e-26 | |
| d1amua_ | 514 | e.23.1.1 (A:) Phenylalanine activating domain of g | 2e-25 | |
| d1amua_ | 514 | e.23.1.1 (A:) Phenylalanine activating domain of g | 7e-10 | |
| d1amua_ | 514 | e.23.1.1 (A:) Phenylalanine activating domain of g | 5e-06 | |
| d1mdba_ | 536 | e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B | 2e-24 | |
| d1mdba_ | 536 | e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B | 2e-17 | |
| d1mdba_ | 536 | e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B | 1e-09 | |
| d1mdba_ | 536 | e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B | 1e-06 | |
| d1mdba_ | 536 | e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B | 1e-06 | |
| d3cw9a1 | 503 | e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc | 3e-18 | |
| d3cw9a1 | 503 | e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc | 5e-15 | |
| d3cw9a1 | 503 | e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc | 4e-10 | |
| d3cw9a1 | 503 | e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc | 6e-06 | |
| d3cw9a1 | 503 | e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc | 6e-06 |
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Score = 136 bits (343), Expect = 2e-33
Identities = 90/595 (15%), Positives = 176/595 (29%), Gaps = 104/595 (17%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
++ +LH+ R LL+ I GD VA+ P + A C +GAV I
Sbjct: 104 ISYRELHRDVCRFANTLLDLG-IKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGF 162
Query: 1259 PQN-------------------LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNV 1299
++ + +V ++ + +V ++ K +
Sbjct: 163 SPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSD 222
Query: 1300 VDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAA-VTSLC 1358
+D + + D + K A AE ++ ++ +TG G+ + +
Sbjct: 223 IDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAA 282
Query: 1359 RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418
+ K + +P D G + + + G +++ PA V
Sbjct: 283 TTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVV 342
Query: 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSK 1478
+++V + + + +R V E A+
Sbjct: 343 DKHQVNILYTAPTAIRALMA-----EGDKAIEGTDRSSLRILGSVGEPINP----EAWEW 393
Query: 1479 LFSALGLSPRAVSTSFG---CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSP 1535
+ +G V ++ + L GA +
Sbjct: 394 YWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSA-------------------- 433
Query: 1536 HSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQS--PHNASGYFSLYGDESEYA 1593
+ GV+ + + E + G + + P A +GD +
Sbjct: 434 --------TRPFFGVQPALVDNEGH-PQEGATEGNLVITDSWPGQARTL---FGDHERFE 481
Query: 1594 QQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIM 1653
Q + + T + +G ++ G +D+ +
Sbjct: 482 QTYFS------TFKNMYFSGDGARRDE------------------DGYYWITGRVDDVLN 517
Query: 1654 LRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGNESEALDLVPLVT 1708
+ G R +IE+ + AH KIAE AV + V L+ E + +L V
Sbjct: 518 VSGHRLGTAEIES-ALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVR 576
Query: 1709 NAVLEE--HHLIVGVAVVVDPGVVPINSRGEKQRMHLRD---GFLADQLDPIYVA 1758
N V +E V D +P G+ R LR G ++ D +A
Sbjct: 577 NWVRKEIGPLATPDVLHWTDS--LPKTRSGKIMRRILRKIAAGDTSNLGDTSTLA 629
|
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Score = 122 bits (307), Expect = 7e-29
Identities = 94/598 (15%), Positives = 174/598 (29%), Gaps = 92/598 (15%)
Query: 84 EAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLK 143
+ R+ + S ++Y +L + A TLL + +K
Sbjct: 75 ANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLL--------DLGIK 126
Query: 144 SGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTR-------RDAGSQQI----G 192
GD +A+ P A C G V I + D+ S+ +
Sbjct: 127 KGDVVAIYMPMV--PEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADE 184
Query: 193 FLLGSCDIQVALTSDACLKGLPKTAAGEVVAFK------GWPKLTWFVTEHLAKTPKDWA 246
+ I + D LK T+ V+ K W + L +
Sbjct: 185 GVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEH 244
Query: 247 PQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHC-RALTQACHYTEGENMVCVLDFK 305
+ + P +I YT+ G GV T L + Y G+ C D
Sbjct: 245 QPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVG 304
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365
TG + + + G + PA Q++ K++ ++ L+A
Sbjct: 305 WVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPT-AIRALMAE 363
Query: 366 KDH--KDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSEC-LTV 422
D + SSLR+L P + + + + + + +E +
Sbjct: 364 GDKAIEGTDRSSLRILGS--VGEPINPEAWEWYWKKIGKEKCP---VVDTWWQTETGGFM 418
Query: 423 SVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDS 482
PG + A + G +V D+
Sbjct: 419 ITPLPGAIELKAGS-----------------------------ATRPFFGVQPALV--DN 447
Query: 483 PSYLCKTDEVGEICVAST--GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLL 540
+ + G + + + G +G T+ T SG
Sbjct: 448 EGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTF----------KNMYFSGDG 497
Query: 541 GFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIR-VLRD 599
G ++ G D ++ V+G + +I + ++A + AV I ++
Sbjct: 498 ARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIA-----EAAVVGIPHAIKG 552
Query: 600 ERIC--VIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGI 655
+ I V + S E + + V + + + L + LPKT G I
Sbjct: 553 QAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPD----VLHWTDSLPKTRSGKI 606
|
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Score = 58.9 bits (142), Expect = 4e-09
Identities = 29/191 (15%), Positives = 54/191 (28%), Gaps = 14/191 (7%)
Query: 779 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 838
L + S ++ ++ +LH+ R LL+ I GD VA+
Sbjct: 76 NCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLG-IKKGDVVAIY 134
Query: 839 FPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFT 898
P + A C +GAV I E + +S ++ T
Sbjct: 135 MPMVPEAAVAMLACARIGAVHSVIFGGFS-------------PEAVAGCIIDSSSRLVIT 181
Query: 899 LLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLCC 958
+ + + + +E + + + G DL
Sbjct: 182 ADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKAS 241
Query: 959 PSNHPTPSPSE 969
P + P +E
Sbjct: 242 PEHQPEAMNAE 252
|
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Score = 49.3 bits (117), Expect = 3e-06
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 13/126 (10%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
++ G +D+ + + G R +IE+ + AH KIAE AV + V L+
Sbjct: 506 YWITGRVDDVLNVSGHRLGTAEIES-ALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHG 564
Query: 1063 ESEALDLVPLVTNAVLEE--HHLIVGVAVVVDPGVVPINSRGEKQRMHLRD---GFLADQ 1117
E + +L V N V +E V D +P G+ R LR G ++
Sbjct: 565 EEPSPELYAEVRNWVRKEIGPLATPDVLHWTDS--LPKTRSGKIMRRILRKIAAGDTSNL 622
Query: 1118 LDPIYI 1123
D +
Sbjct: 623 GDTSTL 628
|
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Score = 45.4 bits (107), Expect = 7e-05
Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 2/128 (1%)
Query: 882 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 941
L + S ++ ++ +LH+ R LL+ I GD VA+
Sbjct: 76 NCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLG-IKKGDVVAIY 134
Query: 942 FPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSG-RQQICSSLIQPKCDQTSQ 1000
P + A C + H S DS R I +
Sbjct: 135 MPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPL 194
Query: 1001 VEKLHDAV 1008
+ + DA+
Sbjct: 195 KKNVDDAL 202
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 128 bits (321), Expect = 1e-30
Identities = 78/586 (13%), Positives = 169/586 (28%), Gaps = 105/586 (17%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+T +L + +V +L + GD VA+ P + I +GA+ +
Sbjct: 91 ITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGF 150
Query: 1259 PQN----------------------LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA 1296
N + T R++ D + + + V + +
Sbjct: 151 SSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSV 210
Query: 1297 SNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSH-AAVT 1355
+ + K K +E +L ++ +TG G++ S +
Sbjct: 211 AFHAPRDLDW----ATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLL 266
Query: 1356 SLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWL 1415
+M+ + + D G V + G +++ + N + +
Sbjct: 267 GALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYW 326
Query: 1416 SAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSA 1475
+ +++V + + + L + N +L +R V E
Sbjct: 327 DIIDEHKVTQFYVAPTALRLLKR-----AGDSYIENHSLKSLRCLGSVGEPIAA----EV 377
Query: 1476 FSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSP 1535
+ +G + + ++ E V A + P
Sbjct: 378 WEWYSEKIGKNEIPIVDTYWQ-------------TESGSHLVTPLAGGVTPMKPGSASFP 424
Query: 1536 HSLCLLESGKLLPGVKVIIANPETKGQCGDSH-LGEIWVQSPHNASGYFSLY-GDESEYA 1593
G+ ++ +P T + SH G + V++ + + Y
Sbjct: 425 -----------FFGIDAVVLDPNTGEELNTSHAEGVLAVKAA--WPSFARTIWKNHDRYL 471
Query: 1594 QQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIM 1653
+ N Y TG + ++++G +D+ +
Sbjct: 472 DTYL------NPYPGYYFTGDGAAKDK------------------DGYIWILGRVDDVVN 507
Query: 1654 LRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN-------ESEAL 1701
+ G R +IE + +AECAV + V L + E
Sbjct: 508 VSGHRLSTAEIEA-AIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKNKSSWSTATDDELQ 566
Query: 1702 DLVPLVTNAVLEE--HHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745
D+ + V ++ + ++VD +P G+ R LR
Sbjct: 567 DIKKHLVFTVRKDIGPFAAPKLIILVDD--LPKTRSGKIMRRILRK 610
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 107 bits (267), Expect = 4e-24
Identities = 86/600 (14%), Positives = 166/600 (27%), Gaps = 86/600 (14%)
Query: 84 EAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLK 143
+ R+ T ++TY +LL +VA L ++
Sbjct: 62 YNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYS-------MGVR 114
Query: 144 SGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTR-------RDAGSQ----QIG 192
GD +A+ P + G + + + D S+
Sbjct: 115 KGDTVAVYMPMV--PEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDE 172
Query: 193 FLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEH-----LAKTPKDWAP 247
G I+ D L+ P V P + + K K + P
Sbjct: 173 SNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWATEKKKYKTYYP 232
Query: 248 QPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ-ACHYTEGENMVCVLDFKR 306
+ + P ++ YT+ G+ GV + A L + + + D
Sbjct: 233 CTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGW 292
Query: 307 ETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA-VVKSRDLHWGLLAT 365
TG + V +L G + N + + +I +++ + V +
Sbjct: 293 ITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGD 352
Query: 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR 425
++ SL SLR L P + + + G I +E +
Sbjct: 353 SYIENHSLKSLRCLGS--VGEPIAAEVWEWYSEKI---GKNEIPIVDTYWQTES-GSHLV 406
Query: 426 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485
P GV G G V+ ++
Sbjct: 407 TPLAGGVTPMKPG--------------------------SASFPFFGIDAVVLDPNTGEE 440
Query: 486 LCKTDEVGEICVASTGTG--SQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFL 543
L + G + V + W T+ Y +G
Sbjct: 441 LNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNP----------YPGYYFTGDGAAK 490
Query: 544 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERI 602
G +++ G D ++ V+G + + +I A ++ + AV L + +
Sbjct: 491 DKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIVA-----ECAVVGFNDDLTGQAV 545
Query: 603 CVIAEQRPDCS-----EEESFQWMSRVLQAVDSIHQVGLYCL--ALVPPNYLPKTPLGGI 655
+ S ++E ++ V +G + ++ + LPKT G I
Sbjct: 546 AAFVVLKNKSSWSTATDDELQDIKKHLVFTVRK--DIGPFAAPKLIILVDDLPKTRSGKI 603
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.9 bits (139), Expect = 9e-09
Identities = 15/91 (16%), Positives = 28/91 (30%)
Query: 779 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 838
+ A T + +T +L + +V +L + GD VA+
Sbjct: 63 NCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVY 122
Query: 839 FPPGIDLICAFYGCLYVGAVPVTIRPPHPQN 869
P + I +GA+ + N
Sbjct: 123 MPMVPEAIITLLAISRIGAIHSVVFAGFSSN 153
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.9 bits (126), Expect = 3e-07
Identities = 20/126 (15%), Positives = 41/126 (32%)
Query: 882 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 941
+ A T + +T +L + +V +L + GD VA+
Sbjct: 63 NCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVY 122
Query: 942 FPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTSQV 1001
P + I + H SSN R ND + + ++ + + +
Sbjct: 123 MPMVPEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIET 182
Query: 1002 EKLHDA 1007
+++ D
Sbjct: 183 KRIVDD 188
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (104), Expect = 1e-04
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 17/118 (14%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
++++G +D+ + + G R +IE + +AECAV + V L
Sbjct: 496 IWILGRVDDVVNVSGHRLSTAEIEA-AIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKNK 554
Query: 1063 -------ESEALDLVPLVTNAVLEE--HHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1111
+ E D+ + V ++ + ++VD +P G+ R LR
Sbjct: 555 SSWSTATDDELQDIKKHLVFTVRKDIGPFAAPKLIILVDD--LPKTRSGKIMRRILRK 610
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Score = 123 bits (308), Expect = 2e-29
Identities = 102/555 (18%), Positives = 183/555 (32%), Gaps = 78/555 (14%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
T +++++RA R+ L + GD VA + + A++ +GAV T P
Sbjct: 41 TTYAEVYQRARRLMGGLRAL-GVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRL 99
Query: 1259 PQN-LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKK 1317
+ L V + L+ + + LK+ + V+D K+ L ++ +
Sbjct: 100 SPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGE 159
Query: 1318 KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAA-VTSLCRSMKLACELYPSRHIALC 1376
+ + A + ++ TTG+ G+ SH A V + + + + L
Sbjct: 160 EADPVRVPERA--ACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLP 217
Query: 1377 LDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELC 1436
+ P + ++ G +L P ++PA + V T V
Sbjct: 218 VVPMFHVNAWCLPYAATLVGAKQVLPGP---RLDPASLVELFDGEGVTFTAGVPTVWLAL 274
Query: 1437 TKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGC 1496
L++ L +R VV PR L + F + G
Sbjct: 275 AD-------YLESTGHRLKTLRRLVVGGSAAPR-SLIARFER---------------MGV 311
Query: 1497 RVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIAN 1556
V L S ++ L + +G +P V++ +A+
Sbjct: 312 EVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAK--------TGLPIPLVRLRVAD 363
Query: 1557 PETKGQCGDSH-LGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYL 1615
E + D LGE+ ++ P GY YG+E T + + RTG +
Sbjct: 364 EEGRPVPKDGKALGEVQLKGPWITGGY---YGNEEATRSAL--------TPDGFFRTGDI 412
Query: 1616 GFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKI 1675
G V + L + I G +D+EN + H K+
Sbjct: 413 AVWD---EEGY---------------VEIKDRLKDLIKSGGEWISSVDLEN-ALMGHPKV 453
Query: 1676 AECAVF-----TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVV 1730
E AV W + VV G + +L + A + L V + +
Sbjct: 454 KEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEHLLKAGFAKWQLPDAY-VFAEE--I 510
Query: 1731 PINSRGEKQRMHLRD 1745
P S G+ + LR+
Sbjct: 511 PRTSAGKFLKRALRE 525
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Score = 113 bits (282), Expect = 3e-26
Identities = 92/590 (15%), Positives = 181/590 (30%), Gaps = 79/590 (13%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L LE A +G G+ TY ++ R+ ++ L
Sbjct: 13 LWDFLERAAALFGRKE-----VVSRLHTGE-VHRTTYAEVYQRARRLMGGLR-------- 58
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ GDR+A + N+ L A++ G V L+ ++I ++L
Sbjct: 59 ALGVGVGDRVATLGFNH--FRHLEAYFAVPGMGAVLHTANPRLS-----PKEIAYILNHA 111
Query: 199 DIQVALTSDACLKGLPKTAAG--EVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTP 256
+ +V L L + V F + + + A R+ +
Sbjct: 112 EDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGEEADPVRVPERAA 171
Query: 257 AYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCV-LDFKRETGLWHSVL 315
+ YTT G GV + A++ H A + E V + + W
Sbjct: 172 CGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPY 231
Query: 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSS 375
+ L G V +++PAS +++ + + L + L +
Sbjct: 232 AATLVGAKQVLPGP---RLDPASLVELFDGEGVTFTAGVPT-VWLALADYLESTGHRLKT 287
Query: 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNAT 435
LR L+VG A P SL ++ F+ G+ +S + + + ++
Sbjct: 288 LRRLVVGGSAAPRSL------IARFERMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEE 341
Query: 436 GRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEI 495
+ L G +P + V + +GE+
Sbjct: 342 EKLTLKAK----------------------TGLPIPLVRLRVADEEGRPVPKDGKALGEV 379
Query: 496 CVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSR 555
+ Y+G + + D + R+G + G V +
Sbjct: 380 QLKGPWITGGYYGNEEATRSALT------------PDGFFRTGDIAVWDEEGYVEIKDRL 427
Query: 556 DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCSE 614
L+ G ++ D+ ++ +K AV +I ER + R +
Sbjct: 428 KDLIKSGGEWISSVDLENALMGHPKVK-----EAAVVAIPHPKWQERPLAVVVPRGEKPT 482
Query: 615 EESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664
E + +L+A + Q+ V +P+T G + ++
Sbjct: 483 PE--ELNEHLLKAGFAKWQLPDA---YVFAEEIPRTSAGKFLKRALREQY 527
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Score = 62.2 bits (150), Expect = 4e-10
Identities = 55/425 (12%), Positives = 112/425 (26%), Gaps = 36/425 (8%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 836
+ + L+ AA + + L+ T +++++RA R+ L + GD VA
Sbjct: 13 LWDFLERAAALFGRKEVVSRLH--TGEVHRTTYAEVYQRARRLMGGLRAL-GVGVGDRVA 69
Query: 837 LIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQN-LQTTLPTHQFISEILKWRAASTSEHV 895
+ + A++ +GAV T P + L + + E +
Sbjct: 70 TLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAI 129
Query: 896 IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 955
L + + + E + ++ + + G + G
Sbjct: 130 RGELKTVQHFVVMDEKAPEGYLAYEEALGEEADPVRVPERAACGMAYTTGTTGLPK--GV 187
Query: 956 LCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQ-PKCDQTSQVEKLHDAVFVVGAL 1014
+ S + S T + C + V L
Sbjct: 188 VYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGPRL 247
Query: 1015 DETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLV---- 1070
D ++ + V +A+ T L + + G + L+
Sbjct: 248 DPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARFE 307
Query: 1071 ---PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQ------------RMHLRDGFLA 1115
V V V V + ++ + R+ + D
Sbjct: 308 RMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVADEEGR 367
Query: 1116 DQLDPI----YIWVQSPHNASGYFSLYGDESEYAQQFSAR--LVTGNTGELYARTGYLGF 1169
+ ++ P GY YG+E + TG+ GY+
Sbjct: 368 PVPKDGKALGEVQLKGPWITGGY---YGNEEATRSALTPDGFFRTGDIAVWDEE-GYVEI 423
Query: 1170 LRRTS 1174
R
Sbjct: 424 KDRLK 428
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Score = 49.9 bits (118), Expect = 2e-06
Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
V + L + I G +D+EN + H K+ E AV W + VV G
Sbjct: 421 VEIKDRLKDLIKSGGEWISSVDLEN-ALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRGE 479
Query: 1063 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1111
+ +L + A + L V + +P S G+ + LR+
Sbjct: 480 KPTPEELNEHLLKAGFAKWQLPDAY-VFAEE--IPRTSAGKFLKRALRE 525
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Score = 47.2 bits (111), Expect = 1e-05
Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Query: 872 TTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAK 931
T + + + L+ AA + + L+ T +++++RA R+ L
Sbjct: 5 TMMDEELNLWDFLERAAALFGRKEVVSRLH--TGEVHRTTYAEVYQRARRLMGGLRAL-G 61
Query: 932 INTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQIC 987
+ GD VA + + A++ + T +P S + N + + +
Sbjct: 62 VGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLL 117
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Score = 120 bits (302), Expect = 1e-28
Identities = 74/567 (13%), Positives = 167/567 (29%), Gaps = 94/567 (16%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+T ++ + + R+ + +NT + + + G L++G +
Sbjct: 48 ITYAEYFEMSVRLAEAMKRY-GLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIY 106
Query: 1259 PQN-----LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDD 1313
+ + + PTV + ++ + + + K + D + + ++
Sbjct: 107 NERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVT 166
Query: 1314 MPKKKLAALY-----RAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR-SMKLACEL 1367
Y + +A + S +TG+ G+ + H +
Sbjct: 167 SHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGN 226
Query: 1368 YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTF 1427
A+ GF ++ +++ L+L ++ Y+++
Sbjct: 227 QIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY---RFEEELFLRSLQDYKIQSAL 283
Query: 1428 CSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSP 1487
+ K + S ++ S
Sbjct: 284 LVPTLFSFFAK--------------------------STLIDKYDLSNLHEIASGGAPLS 317
Query: 1488 RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL 1547
+ V + R ++ QG E + + + ++ GK++
Sbjct: 318 KEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAV--------------GKVV 363
Query: 1548 PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGE 1607
P + + + +T G + GE+ V+ P SGY + +
Sbjct: 364 PFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGY---VNNPEATNALI--------DKD 412
Query: 1608 LYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENS 1667
+ +G + + + F+V L I +G + P ++E+
Sbjct: 413 GWLHSGDIAYWDE------------------DEHFFIVDRLKSLIKYKGYQVAPAELES- 453
Query: 1668 VMRAHKKIAECAVF-----TWTNLLVVVVEL-DGNESEALDLVPLVTNAVLEEHHLIVGV 1721
++ H I + V L VV L G ++V V + V L GV
Sbjct: 454 ILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGV 513
Query: 1722 AVVVDPGVVPINSRGEKQRMHLRDGFL 1748
V VD VP G+ +R+ +
Sbjct: 514 -VFVDE--VPKGLTGKLDARKIREILI 537
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Score = 112 bits (280), Expect = 5e-26
Identities = 82/610 (13%), Positives = 174/610 (28%), Gaps = 87/610 (14%)
Query: 67 PAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVA 126
PAP L L A++RY +A D + + + +TY + S+++A
Sbjct: 8 PAPFYPLE-DGTAGEQLHKAMKRYALVP--GTIA-FTDAHIE--VNITYAEYFEMSVRLA 61
Query: 127 YTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDA 186
+ L + RI + N+ + F G +F G+ P R+
Sbjct: 62 EAMK--------RYGLNTNHRIVVCSENS--LQFFMPVLGALFIGVAVAPANDIYNEREL 111
Query: 187 GS--QQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVV----AFKGWPKLTWFVTEHL-- 238
+ + + K LP ++ ++G+ + FVT HL
Sbjct: 112 LNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPP 171
Query: 239 AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENM 298
D+ P+ D T A I ++ G GV + +
Sbjct: 172 GFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPD 231
Query: 299 VCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDL 358
+ + + L + + + + +++ + Y+ + + L
Sbjct: 232 TAI--LSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYK-IQSALLVPTL 288
Query: 359 HWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSE 418
+ LS+L + G + + P +
Sbjct: 289 FSFFAKSTLIDKYDLSNLHEIASGGAPLSK------EVGEAVAKRFHLPGIRQGYGLTET 342
Query: 419 CLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478
+ + G A G+ V+P VV
Sbjct: 343 TSAILITPEGDDKPGAVGK-------------------------------VVPFFEAKVV 371
Query: 479 KMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSG 538
+D+ ++ GE+CV S Y P +N +D + SG
Sbjct: 372 DLDTGK-TLGVNQRGELCVRGPMIMSGYVNNPEATNALI------------DKDGWLHSG 418
Query: 539 LLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-L 597
+ + F+ L+ G + ++ + +L + V +
Sbjct: 419 DIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIF-----DAGVAGLPDDD 473
Query: 598 RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHL 657
E + + E + + V V + ++ +V + +PK G +
Sbjct: 474 AGELPAAVVVLEHGKTMTEK-EIVDYVASQVTTAKKLRGG---VVFVDEVPKGLTGKLDA 529
Query: 658 SECKRRFLEG 667
+ + ++
Sbjct: 530 RKIREILIKA 539
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Score = 60.3 bits (145), Expect = 1e-09
Identities = 28/296 (9%), Positives = 78/296 (26%), Gaps = 18/296 (6%)
Query: 763 PMEEDSDATRKHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGAL 822
P D T + + + +K R A + FT +T ++ + + R+
Sbjct: 10 PFYPLEDGTA-GEQLHKAMK-RYALVPGTIAFT----DAHIEVNITYAEYFEMSVRLAEA 63
Query: 823 LLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQN-----LQTTLPTH 877
+ +NT + + + G L++G + + + + PT
Sbjct: 64 MKRY-GLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTV 122
Query: 878 QFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDH 937
F+S+ + + + + ++ ++ + + + ++
Sbjct: 123 VFVSKKGLQKILNVQKKL------PIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEY 176
Query: 938 VALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQ 997
+ D A + P + +
Sbjct: 177 DFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILS 236
Query: 998 TSQVEKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLL 1053
+G L + M ++ ++ +K + V T +
Sbjct: 237 VVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFF 292
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Score = 49.9 bits (118), Expect = 2e-06
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVEL-DG 1061
F+V L I +G + P ++E+ ++ H I + V L VV L G
Sbjct: 429 FFIVDRLKSLIKYKGYQVAPAELES-ILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHG 487
Query: 1062 NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1114
++V V + V L GV V VD VP G+ +R+ +
Sbjct: 488 KTMTEKEIVDYVASQVTTAKKLRGGV-VFVDE--VPKGLTGKLDARKIREILI 537
|
| >d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Phenylalanine activating domain of gramicidin synthetase 1 species: Bacillus brevis [TaxId: 1393]
Score = 112 bits (281), Expect = 4e-26
Identities = 74/545 (13%), Positives = 162/545 (29%), Gaps = 91/545 (16%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
LTY +L ++ ++A + E + + ++ + I+ + AG
Sbjct: 48 QLTYHELNVKANQLARIFI--------EKGIGKDTLVGIMMEKS--IDLFIGILAVLKAG 97
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLT 231
VPI++ + +I ++L ++ LT + + + F G ++
Sbjct: 98 GAYVPIDIEYPKE-----RIQYILDDSQARMLLTQKHLVHLIHN------IQFNGQVEIF 146
Query: 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH 291
T + + P AY+ YT+ G+ G + + + + +
Sbjct: 147 EEDTIKIREGTNLHVPSK---STDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLN 203
Query: 292 YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA 351
TE + + + +W + + ++YI + + Q I + +V
Sbjct: 204 VTEKDRIGQFASISFDASVWEMFMALL--TGASLYIILKDTINDFVKFEQYINQKEITVI 261
Query: 352 VVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAIC 411
+ + + S++ L+ A SL + + + +
Sbjct: 262 TLPPTYVVH-------LDPERILSIQTLITAGSATSPSLVNKWK-------EKVTYINAY 307
Query: 412 PCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP 471
++ C T V G + P
Sbjct: 308 GPTETTICATTWVATKETIGHSVPIG--------------------------------AP 335
Query: 472 GCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQ 531
+ +D L E GE+C+ G YW P L++ F D +
Sbjct: 336 IQNTQIYIVDENLQLKSVGEAGELCIGGEGLARGYWKRPELTSQKFV------DNPFVPG 389
Query: 532 DTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAV 591
+ ++G G + G D + + G + +++ + +L + AV
Sbjct: 390 EKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYIS-----ETAV 444
Query: 592 FSIR-VLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKT 650
+ +C E+ Q+ S L + + +P T
Sbjct: 445 SVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEELPTYMIPSYF-------IQLDKMPLT 497
Query: 651 PLGGI 655
G I
Sbjct: 498 SNGKI 502
|
| >d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Phenylalanine activating domain of gramicidin synthetase 1 species: Bacillus brevis [TaxId: 1393]
Score = 110 bits (276), Expect = 2e-25
Identities = 77/552 (13%), Positives = 172/552 (31%), Gaps = 96/552 (17%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT +L+ +A ++ + +E+ I V ++ IDL L G V I +
Sbjct: 49 LTYHELNVKANQLARIFIEKG-IGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEY 107
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
P+ ++ I+D S++ ++L+ ++++ L+ + + I + D + ++
Sbjct: 108 PK------ERIQYILDDSQARMLLTQKHLVHLIHN------IQFNGQVEIFEEDTIKIRE 155
Query: 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLD 1378
L+ + LAY+ ++ TTG G + H +++L + + + I
Sbjct: 156 GTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQF-- 213
Query: 1379 PYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTK 1438
++W + S+ I + + + ++Q + +
Sbjct: 214 ASISFDASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHL-- 271
Query: 1439 GLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498
+ ++T + + +V
Sbjct: 272 -----------DPERILSIQTLITAGSATSPSLVNKWKE-------------------KV 301
Query: 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPE 1558
+ + +V + V + G+P I E
Sbjct: 302 TYINAYGPTETTICATTWVATKETIGHSVPI---GAPIQNT------------QIYIVDE 346
Query: 1559 TKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFL 1618
GE+ + A GY + +Q+F GE +TG
Sbjct: 347 NLQLKSVGEAGELCIGGEGLARGY---WKRPELTSQKF--VDNPFVPGEKLYKTGDQARW 401
Query: 1619 RRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAEC 1678
G + +G +D + +RG R ++E+ ++ H I+E
Sbjct: 402 L------------SDG------NIEYLGRIDNQVKIRGHRVELEEVES-ILLKHMYISET 442
Query: 1679 AVF-----TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPIN 1733
AV L + + L + + ++I + +D +P+
Sbjct: 443 AVSVHKDHQEQPYLCAYFVSEKHIPLE-QLRQFSSEEL--PTYMIPSYFIQLDK--MPLT 497
Query: 1734 SRGEKQRMHLRD 1745
S G+ R L +
Sbjct: 498 SNGKIDRKQLPE 509
|
| >d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Phenylalanine activating domain of gramicidin synthetase 1 species: Bacillus brevis [TaxId: 1393]
Score = 61.4 bits (148), Expect = 7e-10
Identities = 48/405 (11%), Positives = 112/405 (27%), Gaps = 29/405 (7%)
Query: 773 KHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTG 832
+ + I ++ + + + +V + LT +L+ +A ++ + +E+ I
Sbjct: 21 RDKTIHQLFEEQVSKRPNNVAIV------CENEQLTYHELNVKANQLARIFIEKG-IGKD 73
Query: 833 DHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTS 892
V ++ IDL L G V I +P+ Q+I + + R T
Sbjct: 74 TLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPK------ERIQYILDDSQARMLLTQ 127
Query: 893 EHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 952
+H++ + N + + + K E + D +I+ G
Sbjct: 128 KHLVHLIHNIQFNGQVEIFEEDTIKIREGTNL----HVPSKSTDLAYVIYTSGTTGNPKG 183
Query: 953 YGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTSQVEKLHDAVFVVG 1012
++ S N + + + L+ +
Sbjct: 184 TMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYI-ILKDT 242
Query: 1013 ALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELD-GNESEALDLVP 1071
D + + I + + + + L+ ++ + V
Sbjct: 243 INDFVKFEQYINQKEITVITLPPTYVVHLDPERILSIQTLITAGSATSPSLVNKWKEKVT 302
Query: 1072 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRG-----EKQRMHLRDGFLADQLDPIYIWVQ 1126
+ E + V + G + + + L + + +
Sbjct: 303 YINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDENLQLKSVGEAGELCIG 362
Query: 1127 SPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLR 1171
A GY + +Q+F GE +TG
Sbjct: 363 GEGLARGY---WKRPELTSQKF--VDNPFVPGEKLYKTGDQARWL 402
|
| >d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Phenylalanine activating domain of gramicidin synthetase 1 species: Bacillus brevis [TaxId: 1393]
Score = 48.7 bits (115), Expect = 5e-06
Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
+ +G +D + +RG R ++E+ ++ H I+E AV L + +
Sbjct: 407 IEYLGRIDNQVKIRGHRVELEEVES-ILLKHMYISETAVSVHKDHQEQPYLCAYFVSEKH 465
Query: 1063 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1111
L + + ++I + +D +P+ S G+ R L +
Sbjct: 466 IPLE-QLRQFSSEEL--PTYMIPSYFIQLDK--MPLTSNGKIDRKQLPE 509
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Score = 107 bits (267), Expect = 2e-24
Identities = 66/566 (11%), Positives = 144/566 (25%), Gaps = 95/566 (16%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+ +L RA+R+ A + I D V + P + + +GA+PV P H
Sbjct: 51 WSYRELDTRADRLAAGFQKLG-IQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSH 109
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
+ + ++ + +S + + I+ + +
Sbjct: 110 RSS-----EITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFL 164
Query: 1319 LAALYRAPTAEM-------LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSR 1371
++ +A+L S +TG+ I +H + C L S
Sbjct: 165 PLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHST 224
Query: 1372 HIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYG 1431
L + + V +++ PS +P + + +V T
Sbjct: 225 VYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPSP---SPDDAFPLIEREKVTITALVPP 281
Query: 1432 VMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVS 1491
+ + + + V + +F ++
Sbjct: 282 LAMV--------WMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMA 333
Query: 1492 TSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551
+ + + GK +
Sbjct: 334 EGLVNYTRLDDPEEIIVNT--------------------------------QGKPMSPYD 361
Query: 1552 VIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYAR 1611
+ G + + P+ GY+ +E A R
Sbjct: 362 ESRVWDDHDRDVKPGETGHLLTRGPYTIRGYY--KAEEHNAASFTEDGFYRTGDIVRLTR 419
Query: 1612 TGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRA 1671
GY+ R + I G + ++EN + A
Sbjct: 420 DGYIVVEGRA---------------------------KDQINRGGEKVAAEEVEN-HLLA 451
Query: 1672 HKKIAECAVF-----TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVD 1726
H + + A+ V + +A +L + L + + V V
Sbjct: 452 HPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERGLAAYKIPDRVEFVES 511
Query: 1727 PGVVPINSRGEKQRMHLRDGFLADQL 1752
P G+ + LR+ ++++L
Sbjct: 512 ---FPQTGVGKVSKKALRE-AISEKL 533
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Score = 85.8 bits (211), Expect = 2e-17
Identities = 81/596 (13%), Positives = 166/596 (27%), Gaps = 99/596 (16%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L +YG + N +Y +L +R+ ++A
Sbjct: 27 FGDLLRDRAAKYGDRIA------ITCGNT----HWSYRELDTRADRLAAGFQ-------- 68
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ ++ DR+ + PN F + G +PV S +I +
Sbjct: 69 KLGIQQKDRVVVQLPNI--KEFFEVIFALFRLGALPVFALPSHR-----SSEITYFCEFA 121
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE-----HLAKTPKDWAPQPRLTD 253
+ + DA ++ A +V + K E L + P +
Sbjct: 122 EAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPLEDLHTEPVKLPEVKS 181
Query: 254 DTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHS 313
A+++ + G + T + + + C + L L
Sbjct: 182 SDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSP 241
Query: 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISL 373
+ VL V + +P +I + + ++ + + A +D
Sbjct: 242 GVLGVLYAGGRVVLS---PSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLS 298
Query: 374 SSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVN 433
S L + G + +
Sbjct: 299 SLQVLQVGGAKFSAEAARRVKAVF------------------------------------ 322
Query: 434 ATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVG 493
G + + G++ G+V + + + + G+ M + V D K E G
Sbjct: 323 --GCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRV-WDDHDRDVKPGETG 379
Query: 494 EICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553
+ T Y+ + +F + R+G + L G + V G
Sbjct: 380 HLLTRGPYTIRGYYKAEEHNAASFTEDG------------FYRTGDIVRLTRDGYIVVEG 427
Query: 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDC 612
+ G K A+++ +LA + A+ S+ ER CV R +
Sbjct: 428 RAKDQINRGGEKVAAEEVENHLLAHPAVH-----DAAMVSMPDQFLGERSCVFIIPRDEA 482
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCL--ALVPPNYLPKTPLGGIHLSECKRRFLE 666
+ L+A + Y + + P+T +G + + E
Sbjct: 483 PKAAE-------LKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAISE 531
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Score = 60.8 bits (146), Expect = 1e-09
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 836
++L+ RAA + + T + +L RA+R+ A + I D V
Sbjct: 27 FGDLLRDRAAKYGDRIAIT------CGNTHWSYRELDTRADRLAAGFQKLG-IQQKDRVV 79
Query: 837 LIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 867
+ P + + +GA+PV P H
Sbjct: 80 VQLPNIKEFFEVIFALFRLGALPVFALPSHR 110
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Score = 51.1 bits (121), Expect = 1e-06
Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 880 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 939
++L+ RAA + + T + +L RA+R+ A + I D V
Sbjct: 27 FGDLLRDRAAKYGDRIAIT------CGNTHWSYRELDTRADRLAAGFQKLG-IQQKDRVV 79
Query: 940 LIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTS 999
+ P + + + PS S+ T+ + ++ I P
Sbjct: 80 VQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAE----AAAYIIPDAYSGF 135
Query: 1000 QVEKLHDAVFVVGALDETIMLRGMRYHPIDIEN 1032
L V + I++ G + +E+
Sbjct: 136 DYRSLARQVQSKLPTLKNIIVAGEAEEFLPLED 168
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Score = 50.8 bits (120), Expect = 1e-06
Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 20/192 (10%)
Query: 932 INTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLI 991
++ D + D+ G L + ++ H + G + +
Sbjct: 357 MSPYDESRVWDDHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVR 416
Query: 992 QPKCDQTSQVEKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF---- 1047
+ + V G + I G + ++EN + AH + + A+
Sbjct: 417 LTR----------DGYIVVEGRAKDQINRGGEKVAAEEVEN-HLLAHPAVHDAAMVSMPD 465
Query: 1048 -TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQR 1106
V + +A +L + L + + V V P G+ +
Sbjct: 466 QFLGERSCVFIIPRDEAPKAAELKAFLRERGLAAYKIPDRVEFVES---FPQTGVGKVSK 522
Query: 1107 MHLRDGFLADQL 1118
LR+ ++++L
Sbjct: 523 KALRE-AISEKL 533
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Score = 87.8 bits (216), Expect = 3e-18
Identities = 78/554 (14%), Positives = 143/554 (25%), Gaps = 90/554 (16%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT ++L R E V A L + VA++ P D++ A +GAVP + P
Sbjct: 30 LTHAELRARVEAVAARLHADG-LRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRL 88
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
+ ++ + + ++ + I ++ +
Sbjct: 89 KS------AELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIFLGDLVRDGEPYSYG 142
Query: 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRH-IALCL 1377
A++ ++ TTG+ + A S M L RH + L L
Sbjct: 143 PPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGL 202
Query: 1378 DPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCT 1437
P + VL + + + ++ E P L V Q +V F + ++
Sbjct: 203 MPLYHVVGFFAVLVAALALDGTYVVVE---EFRPVDALQLVQQEQVTSLFATPTHLDALA 259
Query: 1438 KGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCR 1497
++ L +R P L +
Sbjct: 260 A-----AAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQH---------------LPGE 299
Query: 1498 VNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP 1557
A + + S V I
Sbjct: 300 KVNIYGTTEAMNSLYMRQPKTGTEMAPGFFS-------------------EVRIVRIGGG 340
Query: 1558 ETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGF 1617
+ I S GY A++ + ++ G +
Sbjct: 341 VDEIVANGEEGELIVAASDSAFVGY---LNQPQATAEKLQDGWYRTSDVAVWTPEGTVRI 397
Query: 1618 LRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAE 1677
L R +D+ I+ G HP +IE V+ + E
Sbjct: 398 LGR---------------------------VDDMIISGGENIHPSEIER-VLGTAPGVTE 429
Query: 1678 CAVF-----TWTNLLVVVVEL-DGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVP 1731
V W + V G A L ++ L + ++D +P
Sbjct: 430 VVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELADFKRPKRY-FILDQ--LP 486
Query: 1732 INSRGEKQRMHLRD 1745
N+ + R L
Sbjct: 487 KNALNKVLRRQLVQ 500
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Score = 77.8 bits (190), Expect = 5e-15
Identities = 55/362 (15%), Positives = 105/362 (29%), Gaps = 34/362 (9%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
+ L A R A + G LT+ +L +R VA L
Sbjct: 4 VNEMLRRAATRAPDHC-----ALAVPARGL---RLTHAELRARVEAVAARLH-------- 47
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
L+ R+A+V PN+ + + A G VP + L S ++ L+
Sbjct: 48 ADGLRPQQRVAVVAPNS--ADVVIAILALHRLGAVPALLNPRLK-----SAELAELIKRG 100
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAY 258
++ A+ + A + + L V + + P+ PA+
Sbjct: 101 EMTAAVIAVGRQV---ADAIFQSGSGARIIFLGDLVRDGEPYSYGPPIEDPQREPAQPAF 157
Query: 259 IEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSV 318
I YT+ G + + A S ++ G + V + + +
Sbjct: 158 IFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVA 217
Query: 319 LNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK-DISLSSLR 377
+ Y+ + P +Q++ + + + L A + L SLR
Sbjct: 218 ALALDGTYVVVE--EFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLR 275
Query: 378 LLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGR 437
+ P ++ Q I + L + + G
Sbjct: 276 HVTFAGATMPDAVLETV-----HQHLPGEKVNIYGTTEAMNSLYMRQPKTGTEMAPGFFS 330
Query: 438 GV 439
V
Sbjct: 331 EV 332
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Score = 62.0 bits (149), Expect = 4e-10
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 836
++E+L+ A +H + LT ++L R E V A L + VA
Sbjct: 4 VNEMLRRAATRAPDHCALAVPARGLR----LTHAELRARVEAVAARLHADG-LRPQQRVA 58
Query: 837 LIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 867
++ P D++ A +GAVP + P
Sbjct: 59 VVAPNSADVVIAILALHRLGAVPALLNPRLK 89
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Score = 48.5 bits (114), Expect = 6e-06
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 10/110 (9%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVEL-DG 1061
V ++G +D+ I+ G HP +IE V+ + E V W + V G
Sbjct: 395 VRILGRVDDMIISGGENIHPSEIER-VLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLG 453
Query: 1062 NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1111
A L ++ L + ++D +P N+ + R L
Sbjct: 454 ETLSADALDTFCRSSELADFKRPKRY-FILDQ--LPKNALNKVLRRQLVQ 500
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Score = 48.5 bits (114), Expect = 6e-06
Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 5/137 (3%)
Query: 880 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 939
++E+L+ A +H + LT ++L R E V A L + VA
Sbjct: 4 VNEMLRRAATRAPDHCALAVPARGLR----LTHAELRARVEAVAARLHADG-LRPQQRVA 58
Query: 940 LIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTS 999
++ P D++ A + +P S ++ + D
Sbjct: 59 VVAPNSADVVIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIF 118
Query: 1000 QVEKLHDAVFVVGALDE 1016
Q +F+ + +
Sbjct: 119 QSGSGARIIFLGDLVRD 135
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1761 | |||
| d1pg4a_ | 643 | Acetyl-CoA synthetase {Salmonella enterica [TaxId: | 100.0 | |
| d1ry2a_ | 640 | Acetyl-CoA synthetase {Baker's yeast (Saccharomyce | 100.0 | |
| d1pg4a_ | 643 | Acetyl-CoA synthetase {Salmonella enterica [TaxId: | 100.0 | |
| d1v25a_ | 534 | Long chain fatty acid-CoA ligase TT0168 {Thermus t | 100.0 | |
| d1lcia_ | 541 | Luciferase {Firefly (Photinus pyralis) [TaxId: 705 | 100.0 | |
| d1ry2a_ | 640 | Acetyl-CoA synthetase {Baker's yeast (Saccharomyce | 100.0 | |
| d1amua_ | 514 | Phenylalanine activating domain of gramicidin synt | 100.0 | |
| d1lcia_ | 541 | Luciferase {Firefly (Photinus pyralis) [TaxId: 705 | 100.0 | |
| d1v25a_ | 534 | Long chain fatty acid-CoA ligase TT0168 {Thermus t | 100.0 | |
| d1mdba_ | 536 | Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil | 100.0 | |
| d1amua_ | 514 | Phenylalanine activating domain of gramicidin synt | 100.0 | |
| d1mdba_ | 536 | Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil | 100.0 | |
| d3cw9a1 | 503 | 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId | 100.0 | |
| d3cw9a1 | 503 | 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId | 100.0 |
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Probab=100.00 E-value=3.8e-71 Score=726.36 Aligned_cols=511 Identities=16% Similarity=0.162 Sum_probs=417.4
Q ss_pred HHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHH
Q psy14338 83 LEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLC 162 (1761)
Q Consensus 83 l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vv 162 (1761)
-+.+++++++.+||++|+++..+++...+++||+||+++++++|+.|+ ++||++||+|+++++|+ +++++
T Consensus 74 ~~n~ldrh~~~~~d~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~--------~~Gv~~Gd~V~i~~~n~--~e~iv 143 (643)
T d1pg4a_ 74 AANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLL--------DLGIKKGDVVAIYMPMV--PEAAV 143 (643)
T ss_dssp HHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEEECCSS--HHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEecccc--hHHHH
Confidence 467788889999999999987655444579999999999999999999 89999999999999999 99999
Q ss_pred HHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc----------------cccceeccC
Q psy14338 163 AFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA----------------AGEVVAFKG 226 (1761)
Q Consensus 163 a~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~----------------~~~~~~~~~ 226 (1761)
++|||+++|++++|++|.++++ ++.+++++++++++|+++.......... ...++....
T Consensus 144 ~~lA~~~~Gav~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~ 218 (643)
T d1pg4a_ 144 AMLACARIGAVHSVIFGGFSPE-----AVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKR 218 (643)
T ss_dssp HHHHHHHHTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECS
T ss_pred HHHHHHHhCeEEEecCCCCCHH-----HHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEecc
Confidence 9999999999999999999977 8999999999999999876433221110 001111110
Q ss_pred C------CcceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHH-HHHHHHHcCCCCCCeEE
Q psy14338 227 W------PKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSH-CRALTQACHYTEGENMV 299 (1761)
Q Consensus 227 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l 299 (1761)
. ........................+++|+|||+|||||||+||||+++|++++.. .......++++++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~ 298 (643)
T d1pg4a_ 219 TGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYW 298 (643)
T ss_dssp SCCCCCCCBTTEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEE
T ss_pred CCcccccccccchhhhhhhcccCcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEE
Confidence 0 0000000111111112222334567899999999999999999999999997654 44556678999999999
Q ss_pred EccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCcee
Q psy14338 300 CVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLR 377 (1761)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr 377 (1761)
+++|++|++++...++.+|++|+++++.+.....+++..+++.|++++||++.++| +++..++.... ....++++||
T Consensus 299 ~~~p~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~l~~l~~~~~~~~~~~dl~sLr 377 (643)
T d1pg4a_ 299 CTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAP-TAIRALMAEGDKAIEGTDRSSLR 377 (643)
T ss_dssp ECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECH-HHHHHHHTTGGGGTTTCCCTTCC
T ss_pred EeCChHHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehH-HHHHHHHhCcchhccccCCCceE
Confidence 99999999998755889999999999987433356899999999999999999985 58888876542 3456789999
Q ss_pred EEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCc
Q psy14338 378 LLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENS 457 (1761)
Q Consensus 378 ~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 457 (1761)
.+++| |++++++++++|.+.++..+++ ++|.||+||++.+++.....
T Consensus 378 ~i~~~--G~pl~~~~~~~~~~~~g~~~~~---i~~~yG~TE~g~~~~~~~~~---------------------------- 424 (643)
T d1pg4a_ 378 ILGSV--GEPINPEAWEWYWKKIGKEKCP---VVDTWWQTETGGFMITPLPG---------------------------- 424 (643)
T ss_dssp EEEEE--SSCCCHHHHHHHHHHTTTTCSC---EEEEBCCGGGSSCSBCCCTT----------------------------
T ss_pred EEEEE--eCCCCHHHHHHHHHHhCCCCce---EEEeechhhccceEEecCCC----------------------------
Confidence 99999 9999999999999998544444 99999999998655432210
Q ss_pred cCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEec--CCccccccCCCccccccccccccccCCCccCCCceE
Q psy14338 458 LTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYT 535 (1761)
Q Consensus 458 ~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~y 535 (1761)
....+.+++|+|++|++++|+|++|+ ++|.|+.|||+|+| |++++|||++++.+.+.|.. ..+|||
T Consensus 425 ~~~~~~gs~G~p~~g~~v~ivd~~g~--~~~~g~~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~----------~~~g~~ 492 (643)
T d1pg4a_ 425 AIELKAGSATRPFFGVQPALVDNEGH--PQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFS----------TFKNMY 492 (643)
T ss_dssp TCCBCTTCCBSBCTTCCEEEECTTCC--BCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHS----------SSTTSE
T ss_pred ccCCCCCccccccCCCEEEEECCCCC--CCCCCceEEEEEecCCCcccccccCChhhchhhhcc----------cCCCeE
Confidence 01234678999999999999999997 59999999999999 57899999999988887642 137899
Q ss_pred eecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCC--
Q psy14338 536 RSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDC-- 612 (1761)
Q Consensus 536 rTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~-- 612 (1761)
+|||+|++|+||+|+|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++. .++.++|||+++++.
T Consensus 493 ~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~~~p~V-----~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~ 567 (643)
T d1pg4a_ 493 FSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKI-----AEAAVVGIPHAIKGQAIYAYVTLNHGEEP 567 (643)
T ss_dssp EEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCC
T ss_pred EcCCEEEECCCceEEEecccccEEEECCEEECHHHHHHHHHhCCCc-----ceEEEEEEECCCCCeEEEEEEEECCCCCC
Confidence 9999999999999999999999999999999999999999998888 79999999864 678999999988753
Q ss_pred CH---HHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 613 SE---EESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 613 ~~---~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+. ++++++|+++|++||+|+.| +.+++||+|+||||+|++|++++..
T Consensus 568 ~~~~~~~i~~~~~~~L~~~~vP~~i-------~~v~~lP~T~sGKi~R~~Lr~~~~~ 617 (643)
T d1pg4a_ 568 SPELYAEVRNWVRKEIGPLATPDVL-------HWTDSLPKTRSGKIMRRILRKIAAG 617 (643)
T ss_dssp CHHHHHHHHHHHHHHTCGGGCCSEE-------EECSCCCBCTTSCBCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhhCCcccCccEE-------EEECCCCCCCCcCccHHHHHHHhcC
Confidence 33 47999999999999999986 5569999999999999999999865
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.1e-69 Score=712.40 Aligned_cols=515 Identities=16% Similarity=0.159 Sum_probs=413.4
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
..+.+++++|+++||++|+++.+++..+.+++||+||+++++++|+.|+. +.||++||+|+|+++|+ ++++
T Consensus 60 ~~~n~ldr~a~~~pd~~Ali~~~~~~g~~~~~Ty~eL~~~v~~~A~~L~~-------~~Gv~~Gd~V~i~~~n~--~e~~ 130 (640)
T d1ry2a_ 60 ACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTY-------SMGVRKGDTVAVYMPMV--PEAI 130 (640)
T ss_dssp HHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHH-------TSCCCTTCEEEECCCSS--HHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEEEecCCCCeeEEeHHHHHHHHHHHHHHHHH-------hcCCCCCCEEEEEeCCC--HHHH
Confidence 45889999999999999999865433333799999999999999999962 46899999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccce--------------ec--c
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVV--------------AF--K 225 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~--------------~~--~ 225 (1761)
+++|||+++|+++||++|.++++ ++.++++++++++++++...............+ .. .
T Consensus 131 ~~~lA~~~~Gav~vpi~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (640)
T d1ry2a_ 131 ITLLAISRIGAIHSVVFAGFSSN-----SLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKT 205 (640)
T ss_dssp HHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSS
T ss_pred HHHHHhccCceEeecCCCCCCHH-----HHHHHHHhhhccccccchhhhhccchhhhHHHHHhhhhhhcccceeeeeccc
Confidence 99999999999999999999976 899999999999999987654332221100000 00 0
Q ss_pred CCCcc-----eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCCeEE
Q psy14338 226 GWPKL-----TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCR-ALTQACHYTEGENMV 299 (1761)
Q Consensus 226 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l 299 (1761)
..+.. ......................++|+|||+|||||||+||||+++|++++.... .....++++++|+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~h~~~~~~~~~~~~~~~~~~~~d~~l 285 (640)
T d1ry2a_ 206 NNPSVAFHAPRDLDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFF 285 (640)
T ss_dssp CCSSCCCCSSSEEEHHHHHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEE
T ss_pred ccccccccccccccccccccccccccccCCcccccCCEEEECCCCCCCCcceeeccccHHHHHHHHHHhhcCCCccccee
Confidence 00000 000000001111122233456789999999999999999999999999877654 444567899999999
Q ss_pred EccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCcee
Q psy14338 300 CVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLR 377 (1761)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr 377 (1761)
+++|++|+++....++.+|+.|+++++.+......++..+++.|+++++|++.++| +++..+..... ....++++||
T Consensus 286 ~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~l~sLr 364 (640)
T d1ry2a_ 286 TAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAP-TALRLLKRAGDSYIENHSLKSLR 364 (640)
T ss_dssp ECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECH-HHHHHHTTSCTTSSSSCCCTTCC
T ss_pred eccchhhhhhHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHhCccEEEcCh-HHHHHHHhccccccccCCCCceE
Confidence 99999999997656889999999999987543346899999999999999999985 47777765432 3456799999
Q ss_pred EEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCc
Q psy14338 378 LLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENS 457 (1761)
Q Consensus 378 ~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 457 (1761)
.+++| |+++++++.++|.+.++..+. .+++.||+||++..+...... .
T Consensus 365 ~v~~g--G~~l~~~~~~~~~~~~g~~~~---~i~~~yg~te~~~~~~~~~~~---------------------------~ 412 (640)
T d1ry2a_ 365 CLGSV--GEPIAAEVWEWYSEKIGKNEI---PIVDTYWQTESGSHLVTPLAG---------------------------G 412 (640)
T ss_dssp EEEEC--SSCCCHHHHHHHHHTTSCSSS---CEEECBCCTTTCSCSEECCTT---------------------------T
T ss_pred EEEEe--cccCcHHHHHHHHHhcCCCcc---eEEeeecccccccccccccCC---------------------------C
Confidence 99999 999999999999999854333 399999999998655433211 1
Q ss_pred cCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEec--CCccccccCCCccccccccccccccCCCccCCCceE
Q psy14338 458 LTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYT 535 (1761)
Q Consensus 458 ~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~y 535 (1761)
....+++++|+|++|++++|+|+++.+.+.+.+..|||+|+| |+++.|||++|+.|.+.|..+ .+|||
T Consensus 413 ~~~~~~gs~G~p~~g~~~~i~d~~~~~~~~~~~~~Gel~i~~~~p~~~~gy~~~~e~t~~~~~~~----------~~gw~ 482 (640)
T d1ry2a_ 413 VTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNP----------YPGYY 482 (640)
T ss_dssp CCCCCTTCCCEECTTCCEEEECSSSTTCEECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSS----------STTSE
T ss_pred cCCCCCcccccccCCceEEEEeCCCCcccCCCCceEEEEEEecCCCcccccccCHHHHHhhhccC----------CCCeE
Confidence 112356789999999999999998876566778889999998 689999999999999998632 37899
Q ss_pred eecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCC-
Q psy14338 536 RSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCS- 613 (1761)
Q Consensus 536 rTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~- 613 (1761)
||||+|++|+||+|+|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++ ..++.++|||++.++..
T Consensus 483 ~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~~I~p~eIE~~l~~~p~V-----~~a~Vvg~~d~~~ge~~~a~Vv~~~~~~~ 557 (640)
T d1ry2a_ 483 FTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIV-----AECAVVGFNDDLTGQAVAAFVVLKNKSSW 557 (640)
T ss_dssp EEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHHHHHHHSSTTE-----EEEEEECCCCCTTSCCCEEEEEEC-----
T ss_pred EcCCceeECCCCCEEEEEcCCCEEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEECCCCCeEEEEEEEEcCCCCc
Confidence 9999999999999999999999999999999999999999998887 7999999985 47889999999876521
Q ss_pred -----------HHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 614 -----------EEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 614 -----------~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
.++++++++++|++||+|+.| +.+++||+|+||||+|++||+++.
T Consensus 558 ~~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i-------~~v~~lP~T~sGKi~R~~Lr~~~~ 613 (640)
T d1ry2a_ 558 STATDDELQDIKKHLVFTVRKDIGPFAAPKLI-------ILVDDLPKTRSGKIMRRILRKILA 613 (640)
T ss_dssp -------CCSHHHHHHHHHHHHTCTTTSCSEE-------EECSCCCBCTTSCBCHHHHHHSCC
T ss_pred cccchHHHHHHHHHHHHHHHhhCCCCCCceEE-------EEeCCCCCCCCcCccHHHHHHHHh
Confidence 256888899999999999986 556999999999999999998764
|
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Probab=100.00 E-value=6.7e-68 Score=695.41 Aligned_cols=498 Identities=17% Similarity=0.160 Sum_probs=399.0
Q ss_pred CCCCCCCceEEccC-CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1179 AGAPVPPGVSSVDT-RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~-~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
+.+||++|+++... ....+++||+||.++++++|+.|++. ||++||+|+++++|++++++++|||+++|++++|++|.
T Consensus 83 ~~~~d~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~~~-Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~ 161 (643)
T d1pg4a_ 83 QENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDL-GIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGG 161 (643)
T ss_dssp HHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTT
T ss_pred HhCCCCEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCC
Confidence 35699999986432 24457899999999999999999999 99999999999999999999999999999999999987
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHH---------HHHhh-hccc------cccccccCCccccCCCC-------
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI---------KLLKS-KEAS------NVVDIKSWPTILDTDDM------- 1314 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~---------~~~~~-~~~~------~~~~~~~~~~~~~~~~~------- 1314 (1761)
++.+ ++.+++++++++++|+++... ..... +... .++..............
T Consensus 162 ~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 235 (643)
T d1pg4a_ 162 FSPE------AVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRD 235 (643)
T ss_dssp SCHH------HHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEEEHHH
T ss_pred CCHH------HHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCcccccccccchhhhh
Confidence 7666 999999999999999875321 11111 0000 00000000000000000
Q ss_pred --ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHH-HHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1315 --PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSL-CRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1315 --~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
............++++++||+|||||||+||||+++|++++.. ...+...+++.++|+++..++++|.++..+.++.
T Consensus 236 ~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~ 315 (643)
T d1pg4a_ 236 LIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYG 315 (643)
T ss_dssp HHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHH
T ss_pred hhcccCcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Confidence 0000111223456889999999999999999999999996654 5556667899999999999999998888777889
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+|++|+++++.+.....+++..+++.|++++||+++++|++++.|++.. .......++++||.+++||+++++ +
T Consensus 316 ~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~-----~~~~~~~dl~sLr~i~~~G~pl~~-~ 389 (643)
T d1pg4a_ 316 PLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEG-----DKAIEGTDRSSLRILGSVGEPINP-E 389 (643)
T ss_dssp HHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTG-----GGGTTTCCCTTCCEEEEESSCCCH-H
T ss_pred HHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCc-----chhccccCCCceEEEEEEeCCCCH-H
Confidence 9999999999876444578999999999999999999999999998742 123356789999999999999999 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+.+ |.+.+.+++.||+||++.+++...... ...+.+++|+|++|++
T Consensus 390 ~~~~~~~~~---g~~~~~i~~~yG~TE~g~~~~~~~~~~-------------------------~~~~~gs~G~p~~g~~ 441 (643)
T d1pg4a_ 390 AWEWYWKKI---GKEKCPVVDTWWQTETGGFMITPLPGA-------------------------IELKAGSATRPFFGVQ 441 (643)
T ss_dssp HHHHHHHHT---TTTCSCEEEEBCCGGGSSCSBCCCTTT-------------------------CCBCTTCCBSBCTTCC
T ss_pred HHHHHHHHh---CCCCceEEEeechhhccceEEecCCCc-------------------------cCCCCCccccccCCCE
Confidence 777777665 444578999999999876554322110 0112356999999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
++|+|++ +++++.|+.|||+|+| |++++|||| +++.+.+.|.. ..+|||+|||+|++ |+|
T Consensus 442 v~ivd~~-g~~~~~g~~Gel~v~~~~p~~~~~~~~---~~~~~~~~~~~------~~~g~~~TGDl~~~------d~d-- 503 (643)
T d1pg4a_ 442 PALVDNE-GHPQEGATEGNLVITDSWPGQARTLFG---DHERFEQTYFS------TFKNMYFSGDGARR------DED-- 503 (643)
T ss_dssp EEEECTT-CCBCCSSEEEEEEECSCCTTCCCEETT---CHHHHHHHHHS------SSTTSEEEEEEEEE------CTT--
T ss_pred EEEECCC-CCCCCCCceEEEEEecCCCcccccccC---Chhhchhhhcc------cCCCeEEcCCEEEE------CCC--
Confidence 9999966 8999999999999999 578999999 99988887742 35789999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-Cchh---H
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESE---A 1700 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~---~ 1700 (1761)
|+ |+|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.+++||+++. ...+ .
T Consensus 504 ------G~----l~i~GR~dd~ik~~G~ri~p~eIE~-~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~~~~~~ 572 (643)
T d1pg4a_ 504 ------GY----YWITGRVDDVLNVSGHRLGTAEIES-ALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELY 572 (643)
T ss_dssp ------SC----EEEEEESSSEEEETTEEEEHHHHHH-HHHHSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHH
T ss_pred ------ce----EEEecccccEEEECCEEECHHHHHH-HHHhCCCcceEEEEEEECCCCCeEEEEEEEECCCCCCCHHHH
Confidence 99 9999999999999999999999999 8999999999999984 458999998753 2222 3
Q ss_pred hhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1701 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1701 ~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
.+|+++|+++ |+ .||+|+.|++++ +||+|+||||+|++|++++...
T Consensus 573 ~~i~~~~~~~-L~-~~~vP~~i~~v~--~lP~T~sGKi~R~~Lr~~~~~~ 618 (643)
T d1pg4a_ 573 AEVRNWVRKE-IG-PLATPDVLHWTD--SLPKTRSGKIMRRILRKIAAGD 618 (643)
T ss_dssp HHHHHHHHHH-TC-GGGCCSEEEECS--CCCBCTTSCBCHHHHHHHHHTC
T ss_pred HHHHHHHHhh-CC-cccCccEEEEEC--CCCCCCCcCccHHHHHHHhcCC
Confidence 5799999997 88 899999999999 9999999999999999998653
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.6e-67 Score=680.38 Aligned_cols=509 Identities=17% Similarity=0.189 Sum_probs=379.3
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+|+++|++.|+++||++|+++.+. |. .+++||+||+++++++|++|. +.|+++||+|+|+++|+ +++
T Consensus 11 ~~l~~~l~~~a~~~pd~~av~~~~~-g~-~~~~Ty~el~~~~~~~A~~L~--------~~Gv~~gd~V~i~~~n~--~e~ 78 (534)
T d1v25a_ 11 LNLWDFLERAAALFGRKEVVSRLHT-GE-VHRTTYAEVYQRARRLMGGLR--------ALGVGVGDRVATLGFNH--FRH 78 (534)
T ss_dssp CCTHHHHHHHHHHSTTCEEEEECTT-SC-EEEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HHH
T ss_pred CCHHHHHHHHHHHcCCCeEEEEecC-Cc-eEEEcHHHHHHHHHHHHHHHH--------HCCcCCCCEEEEEeCCC--HHH
Confidence 4799999999999999999998764 22 268999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-----cceeccCCCcceeEEe
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-----EVVAFKGWPKLTWFVT 235 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 235 (1761)
++++|||+++|+++||++|.++.+ ++.++++++++++++++............. ..+.............
T Consensus 79 ~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (534)
T d1v25a_ 79 LEAYFAVPGMGAVLHTANPRLSPK-----EIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAY 153 (534)
T ss_dssp HHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEH
T ss_pred HHHHHHHHHhCcEEEecCCCCCHH-----HHHHHHHhhccccccccchhhhhHHHHhhcccccceeEEeecccccccccc
Confidence 999999999999999999999876 899999999999999998765443322111 0010000000000000
Q ss_pred ccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH--HHcCCCCCCeEEEccCCcchhhhHHH
Q psy14338 236 EHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT--QACHYTEGENMVCVLDFKRETGLWHS 313 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~ 313 (1761)
... ...........++++++|+|||||||.||||+++|+++++.+.... ..+....++++++++|++|..++..
T Consensus 154 ~~~---~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~- 229 (534)
T d1v25a_ 154 EEA---LGEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCL- 229 (534)
T ss_dssp HHH---CCSCCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTH-
T ss_pred ccc---ccccccccccccCCcEEEEEecCCCCCccccccccchhhhhhhhhhhhcccccccccccccccchhhhccccc-
Confidence 000 1111233456788999999999999999999999999987664443 3445678899999999999999886
Q ss_pred HHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 314 i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
.+.++..|+++++.++ .+++..+...+.++++|++.++| +++..++........++++||.+++| |++++++..
T Consensus 230 ~~~~~~~g~~~v~~~~---~~~~~~~~~~~~~~~vt~~~~~p-~~~~~~~~~~~~~~~~~~~lr~~~~g--G~~~~~~~~ 303 (534)
T d1v25a_ 230 PYAATLVGAKQVLPGP---RLDPASLVELFDGEGVTFTAGVP-TVWLALADYLESTGHRLKTLRRLVVG--GSAAPRSLI 303 (534)
T ss_dssp HHHHHHHTCEEEECTT---CCSHHHHHHHHHHTTCCEEEECH-HHHHHHHHHHHHHTCCCSSCCEEEEC--SSCCCHHHH
T ss_pred cceeeeecceeeeccc---cccccccchhhhhccccccccCc-hhhhhhhhhhccccccccceeEEEEe--cCCCCHHHH
Confidence 7888888888888775 78999999999999999999996 47777766555556788999999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
++|.+. |. ++++.||+||++..++......... ...........+++|+|++|+
T Consensus 304 ~~~~~~----~~---~i~~~yG~te~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~G~p~~g~ 357 (534)
T d1v25a_ 304 ARFERM----GV---EVRQGYGLTETSPVVVQNFVKSHLE-------------------SLSEEEKLTLKAKTGLPIPLV 357 (534)
T ss_dssp HHHHHT----TC---EEEEEEECGGGSSEEEECCCCGGGT-------------------TSCHHHHHHHHTSCBEECTTC
T ss_pred HHHHHh----CC---eeeeeccccccccceeecccCcccc-------------------ccCccccccccccceeccCCc
Confidence 988764 44 3999999999987766543210000 000001123457899999999
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
+++|+|+++++.+...|++|||+|+|+++++||+|+|+.|++.|. .+|||+|||+|++++||.|+|+|
T Consensus 358 ~~~i~d~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~~~------------~dg~~~TGDlg~~~~~G~l~~~G 425 (534)
T d1v25a_ 358 RLRVADEEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALT------------PDGFFRTGDIAVWDEEGYVEIKD 425 (534)
T ss_dssp EEEEECTTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBC------------TTSCEEEEEEEEECTTCCEEEEE
T ss_pred EEEEECCCCCCCCCCCCeeEEEEEcCCcccceecCChhhhhhhcc------------cCCCCccCceeEECCCccEEEec
Confidence 999999999864444588999999999999999999999999984 47899999999999999999999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC-CCHHHHH-HHHHHHHHHhhh
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD-CSEEESF-QWMSRVLQAVDS 630 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~-~~~~~l~-~~l~~~Lp~y~~ 630 (1761)
|+||+||++|+||+|.|||++|.+++.| .+|+|+++++ ..++.++|+|+++.+ ...+++. .++++.||.|++
T Consensus 426 R~~~~i~~~G~~v~~~eIE~~l~~~~~V-----~~a~v~~~~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~~~~l~~~~~ 500 (534)
T d1v25a_ 426 RLKDLIKSGGEWISSVDLENALMGHPKV-----KEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEHLLKAGFAKWQL 500 (534)
T ss_dssp ESSCEEEETTEEEEHHHHHCC---------------CEEEEECSSSSEEEEECC-------------------CCCTTTS
T ss_pred ccccEEEECCEEECHHHHHHHHHhCCCc-----ceEEEEEEECCCCCeEEEEEEEeCCCCCCHHHHHHHHHHhcCCcCCC
Confidence 9999999999999999999999998888 7999999985 467889999987654 3334444 457888999999
Q ss_pred cceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 631 IHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 631 P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
|..| +.+++||+|+||||||++|+++|++
T Consensus 501 P~~i-------~~~~~lP~t~~GKi~R~~lr~~~~~ 529 (534)
T d1v25a_ 501 PDAY-------VFAEEIPRTSAGKFLKRALREQYKN 529 (534)
T ss_dssp CSBC---------------------CCTTHHHHSTT
T ss_pred ccEE-------EEECCCCCCCCccccHHHHHHHHHh
Confidence 9997 5679999999999999999998854
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Probab=100.00 E-value=2.5e-65 Score=664.70 Aligned_cols=499 Identities=16% Similarity=0.214 Sum_probs=393.1
Q ss_pred hhHHHHHHHHhhhc---CCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCc
Q psy14338 81 RNLEAAIQRYGSAT---YKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDP 157 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~---pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~ 157 (1761)
.++.++|.+.++++ |+++|+.+.+. + +++||+||+++++++|+.|+ +.|+++||+|+|+++|+
T Consensus 17 ~t~~~~l~~~~~~~~~~P~~~a~~d~~~-~---~~lTy~el~~~~~~lA~~L~--------~~Gi~~Gd~Vai~~~ns-- 82 (541)
T d1lcia_ 17 GTAGEQLHKAMKRYALVPGTIAFTDAHI-E---VNITYAEYFEMSVRLAEAMK--------RYGLNTNHRIVVCSENS-- 82 (541)
T ss_dssp SCHHHHHHHHHHHHHTSTTCEEEEETTT-C---CEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEEECSSC--
T ss_pred CCHHHHHHHHHHhhCCCCCeEEEEeCCC-C---eEeeHHHHHHHHHHHHHHHH--------HcCcCCCCEEEEEeCCC--
Confidence 46677776666666 77778765332 2 58999999999999999999 89999999999999999
Q ss_pred hhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCC-cce
Q psy14338 158 INFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWP-KLT 231 (1761)
Q Consensus 158 ~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~ 231 (1761)
+++++++|||+++|+++||+++.++.+ ++.+++++++++++|+++...+.+..... ..++..+... ...
T Consensus 83 ~e~~v~~lA~~~~G~i~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (541)
T d1lcia_ 83 LQFFMPVLGALFIGVAVAPANDIYNER-----ELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQG 157 (541)
T ss_dssp SSTHHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTT
T ss_pred HHHHHHHHHHHHhCeEEEecCCCCCHH-----HHHHHHHhccceEEeeeccccccchhccccccccceeeeecCCccccc
Confidence 999999999999999999999999976 89999999999999999876544322211 0111111110 000
Q ss_pred eEEe-----cccc--CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc---CCCCCCeEEEc
Q psy14338 232 WFVT-----EHLA--KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC---HYTEGENMVCV 301 (1761)
Q Consensus 232 ~~~~-----~~~~--~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d~~l~~ 301 (1761)
+... .... .......+.....++++|||+|||||||.||||+++|++++....+....+ .+.++++++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (541)
T d1lcia_ 158 FQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSV 237 (541)
T ss_dssp BEEHHHHHHHHSCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEEC
T ss_pred cchhhhhhhhhccccccccccCccccCCCCceEEEEeeccccccccccccccchhhhhhhhhhhhccccccccccccccc
Confidence 0000 0000 111122233445678999999999999999999999999988777665443 56789999999
Q ss_pred cCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEe
Q psy14338 302 LDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLV 381 (1761)
Q Consensus 302 ~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~ 381 (1761)
+|++|..++.. .+..+..|+++++.. ..++......+..+++|.+.++| .++..++........++++||.+++
T Consensus 238 ~p~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~t~~~~~p-~~~~~~~~~~~~~~~~~~~l~~v~~ 311 (541)
T d1lcia_ 238 VPFHHGFGMFT-TLGYLICGFRVVLMY----RFEEELFLRSLQDYKIQSALLVP-TLFSFFAKSTLIDKYDLSNLHEIAS 311 (541)
T ss_dssp SCTTSHHHHHH-HHHHHHHTCEEEECS----SCCHHHHHHHHHHTTCSEEECCH-HHHHHHHHCSCGGGSCCTTCCEEEC
T ss_pred ccccccccccc-ccccccccccccccc----ccccchhHHHHhhhhccccccCc-cccccccccccccccccccceEEEe
Confidence 99999999985 888899999988877 67899999999999999999986 4777777776666778899999999
Q ss_pred cCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcc
Q psy14338 382 GDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSL 461 (1761)
Q Consensus 382 gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1761)
| |+++++...++|.+.++.. .++++||+||++..++..+.. ..
T Consensus 312 g--G~~~~~~~~~~~~~~~~~~-----~~~~~YG~TE~~~~~~~~~~~------------------------------~~ 354 (541)
T d1lcia_ 312 G--GAPLSKEVGEAVAKRFHLP-----GIRQGYGLTETTSAILITPEG------------------------------DD 354 (541)
T ss_dssp T--TCCCCHHHHHHHHHHTTCS-----CCBCEECCGGGSSCSEECCCC--------------------------------
T ss_pred c--ccccccccccccccccCCc-----eeeecCCccccCceEEecCcc------------------------------cC
Confidence 9 9999999999999988432 489999999998766544321 23
Q ss_pred cccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceE
Q psy14338 462 TLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLG 541 (1761)
Q Consensus 462 ~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~ 541 (1761)
+.+++|+|++|++++|+|++.. .++|.|++|||+|+|++++.||+++++.|...|. +++||+|||+|
T Consensus 355 ~~~svG~p~~~~~~~i~d~d~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~------------~~~~~~TGDl~ 421 (541)
T d1lcia_ 355 KPGAVGKVVPFFEAKVVDLDTG-KTLGVNQRGELCVRGPMIMSGYVNNPEATNALID------------KDGWLHSGDIA 421 (541)
T ss_dssp -CCCCBEECTTCEEEEECTTTC-CBCCTTCCEEEEEESTTSCSEETTBHHHHHHHBC------------TTSCEEEEEEE
T ss_pred CCCccccccCCCEEEEEECCCC-cCCCCCCeEEEEEccCccCCeeCCChhhhhhccc------------CCccccCCCee
Confidence 4678999999999999997654 3799999999999999999999999999988773 47999999999
Q ss_pred EEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHH
Q psy14338 542 FLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESF 618 (1761)
Q Consensus 542 ~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~ 618 (1761)
++++||.++|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++ ..++.++|+|+..++ .+.++++
T Consensus 422 ~~~~~G~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~p~V-----~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~ 496 (541)
T d1lcia_ 422 YWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNI-----FDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIV 496 (541)
T ss_dssp EECTTCCEEEC-----CEEETTEEECHHHHHHHHHTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHH
T ss_pred EEcCCeEEEEeeeecCEEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHH
Confidence 9999999999999999999999999999999999998888 7999999985 467889999997654 6788999
Q ss_pred HHHHHHHHHh-hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 619 QWMSRVLQAV-DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 619 ~~l~~~Lp~y-~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++|+++|++| |+|..+ +.+++||+|+||||||++|++++.+
T Consensus 497 ~~~~~~l~~~~~~p~~i-------~~v~~lP~t~~GKi~r~~l~~~~~~ 538 (541)
T d1lcia_ 497 DYVASQVTTAKKLRGGV-------VFVDEVPKGLTGKLDARKIREILIK 538 (541)
T ss_dssp HHHHHHSCGGGSCTTEE-------EEESSCCC-----CCHHHHHHHHHH
T ss_pred HHHHHhCCccccCCcEE-------EEeCCCCcCCCcCccHHHHHHHHHH
Confidence 9999999776 578876 4459999999999999999998864
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.8e-66 Score=681.46 Aligned_cols=499 Identities=16% Similarity=0.171 Sum_probs=394.3
Q ss_pred CCCCCCCceEEcc-CCCCceeeCHHHHHHHHHHHHHHHH-hhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC
Q psy14338 1179 AGAPVPPGVSSVD-TRSAAQLLTCSQLHKRAERVGALLL-ERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d-~~~~~~~lTY~eL~~~a~~lA~~L~-~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp 1256 (1761)
+++||++|+++.. .....+++||+||.++++++|++|+ +. ||++||+|+|+++|++++++++|||+++|++++|++|
T Consensus 70 ~~~pd~~Ali~~~~~~g~~~~~Ty~eL~~~v~~~A~~L~~~~-Gv~~Gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpi~~ 148 (640)
T d1ry2a_ 70 LKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSM-GVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFA 148 (640)
T ss_dssp TTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTS-CCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCT
T ss_pred hhCCCCEEEEEEecCCCCeeEEeHHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEeCCCHHHHHHHHHhccCceEeecCCC
Confidence 4789999999753 2345689999999999999999997 56 9999999999999999999999999999999999999
Q ss_pred CCCCCccCChHHHHHHHHhcCCeEEEechhH---------HHHHhhhcccc-cc------ccccCCccccCCCC------
Q psy14338 1257 PHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV---------IKLLKSKEASN-VV------DIKSWPTILDTDDM------ 1314 (1761)
Q Consensus 1257 ~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~---------~~~~~~~~~~~-~~------~~~~~~~~~~~~~~------ 1314 (1761)
.+|.+ ++.++++++++++++++... ...+....... .+ ..............
T Consensus 149 ~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (640)
T d1ry2a_ 149 GFSSN------SLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWAT 222 (640)
T ss_dssp TSCHH------HHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSSSEEEHHH
T ss_pred CCCHH------HHHHHHHhhhccccccchhhhhccchhhhHHHHHhhhhhhcccceeeeecccccccccccccccccccc
Confidence 87777 99999999999999987542 11111111000 00 00000000000000
Q ss_pred --ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHH-HHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1315 --PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR-SMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1315 --~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
..........+..+++++||+|||||||+||||+++|++++.... .....+++.++|+++..+|++|.++..+.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~h~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~ 302 (640)
T d1ry2a_ 223 EKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYG 302 (640)
T ss_dssp HHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHHHTTHH
T ss_pred cccccccccccCCcccccCCEEEECCCCCCCCcceeeccccHHHHHHHHHHhhcCCCcccceeeccchhhhhhHHHHHHH
Confidence 000011122345678999999999999999999999999777654 44456789999999999999999988778889
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+|+.|+++++.+......++..+++.|++++||+++++|++++.|.+.. .......++++||.+++||+++++ +
T Consensus 303 ~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-----~~~~~~~~l~sLr~v~~gG~~l~~-~ 376 (640)
T d1ry2a_ 303 PLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAG-----DSYIENHSLKSLRCLGSVGEPIAA-E 376 (640)
T ss_dssp HHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSC-----TTSSSSCCCTTCCEEEECSSCCCH-H
T ss_pred HHHhCCEEEEecCCCCCCCHHHHHHHHHHhCccEEEcChHHHHHHHhcc-----ccccccCCCCceEEEEEecccCcH-H
Confidence 9999999999886555568999999999999999999999999986632 122356789999999999999999 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+. +|.++..+++.||+||++..+....... ....+.+++|+|++|++
T Consensus 377 ~~~~~~~~---~g~~~~~i~~~yg~te~~~~~~~~~~~~------------------------~~~~~~gs~G~p~~g~~ 429 (640)
T d1ry2a_ 377 VWEWYSEK---IGKNEIPIVDTYWQTESGSHLVTPLAGG------------------------VTPMKPGSASFPFFGID 429 (640)
T ss_dssp HHHHHHHT---TSCSSSCEEECBCCTTTCSCSEECCTTT------------------------CCCCCTTCCCEECTTCC
T ss_pred HHHHHHHh---cCCCcceEEeeecccccccccccccCCC------------------------cCCCCCcccccccCCce
Confidence 77777665 4555678999999999765443322111 11122356999999999
Q ss_pred EEEEcCCCCCC-CCCCcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1552 VIIANPETKGQ-CGDSHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1552 ~~v~d~~~~~~-~p~G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
++|+|++++.. .+.+..|||+|+| |+++.|||+ +|+.|.+.|.. +.+|||+|||+|++ |+|
T Consensus 430 ~~i~d~~~~~~~~~~~~~Gel~i~~~~p~~~~gy~~---~~e~t~~~~~~------~~~gw~~TGDlg~~------d~d- 493 (640)
T d1ry2a_ 430 AVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWK---NHDRYLDTYLN------PYPGYYFTGDGAAK------DKD- 493 (640)
T ss_dssp EEEECSSSTTCEECSSCEEEEEESSCCTTSCCEETT---CHHHHHHHHTS------SSTTSEEEEEEEEE------CTT-
T ss_pred EEEEeCCCCcccCCCCceEEEEEEecCCCccccccc---CHHHHHhhhcc------CCCCeEEcCCceeE------CCC-
Confidence 99999876654 4567789999998 689999999 99999999853 35789999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCch-----
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNES----- 1698 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~----- 1698 (1761)
|+ |+|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++|||+++....
T Consensus 494 -------G~----l~i~GR~dd~Ik~~G~~I~p~eIE~-~l~~~p~V~~a~Vvg~~d~~~ge~~~a~Vv~~~~~~~~~~~ 561 (640)
T d1ry2a_ 494 -------GY----IWILGRVDDVVNVSGHRLSTAEIEA-AIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKNKSSWSTAT 561 (640)
T ss_dssp -------CC----EEECSCTTSCBCSSSCCBCHHHHHH-HHHSSTTEEEEEEECCCCCTTSCCCEEEEEEC---------
T ss_pred -------CC----EEEEEcCCCEEEECCEEECHHHHHH-HHHhCCCccEEEEEEEECCCCCeEEEEEEEEcCCCCccccc
Confidence 99 9999999999999999999999999 8999999999999984 457899988753211
Q ss_pred ------hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1699 ------EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1699 ------~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
-.++|+++++++ |+ .||+|+.|++++ +||+|+||||+|++|++++.+
T Consensus 562 ~~~~~~l~~~l~~~~~~~-L~-~~~~P~~i~~v~--~lP~T~sGKi~R~~Lr~~~~~ 614 (640)
T d1ry2a_ 562 DDELQDIKKHLVFTVRKD-IG-PFAAPKLIILVD--DLPKTRSGKIMRRILRKILAG 614 (640)
T ss_dssp ---CCSHHHHHHHHHHHH-TC-TTTSCSEEEECS--CCCBCTTSCBCHHHHHHSCC-
T ss_pred hHHHHHHHHHHHHHHHhh-CC-CCCCceEEEEeC--CCCCCCCcCccHHHHHHHHhC
Confidence 124678888887 88 999999999999 999999999999999998743
|
| >d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Phenylalanine activating domain of gramicidin synthetase 1 species: Bacillus brevis [TaxId: 1393]
Probab=100.00 E-value=4.8e-65 Score=657.34 Aligned_cols=487 Identities=15% Similarity=0.196 Sum_probs=411.0
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..||+++|+++|+++||++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ .+
T Consensus 22 ~~tl~~l~~~~a~~~Pd~~Al~~~~------~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~gd~Vai~~~n~--~~ 85 (514)
T d1amua_ 22 DKTIHQLFEEQVSKRPNNVAIVCEN------EQLTYHELNVKANQLARIFI--------EKGIGKDTLVGIMMEKS--ID 85 (514)
T ss_dssp TCCHHHHHHHHHHHCTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HH
T ss_pred CCcHHHHHHHHHHhCCCCeEEEECC------eeEcHHHHHHHHHHHHHHHH--------HcCcCCcCEEEEEeCCC--HH
Confidence 4689999999999999999999865 79999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
|++++|||+++|++++|++|.++.+ ++.+++++++++++|++......+.......... .......
T Consensus 86 ~v~~~la~~~~G~v~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 151 (514)
T d1amua_ 86 LFIGILAVLKAGGAYVPIDIEYPKE-----RIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVE---------IFEEDTI 151 (514)
T ss_dssp HHHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEE---------ECCCSTT
T ss_pred HHHHHHHHHHhCcEEEEeCCCCCHH-----HHHHHHhccCCcEEEEehhhhhhhhhhccccccc---------ccccccc
Confidence 9999999999999999999999976 8999999999999999987655443322111100 0011111
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHh
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVL 319 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~ 319 (1761)
.............++++|+|+|||||||.||||+++|+++...+......+++..+++++.++|++|..+++. ++.+++
T Consensus 152 ~~~~~~~~~~p~~~~d~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~ 230 (514)
T d1amua_ 152 KIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWE-MFMALL 230 (514)
T ss_dssp TTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHH-HHHHHT
T ss_pred cccccccCCCCCCcccceEEEEccCCCCCcccccccccccccccccccccccccccccccceecccccccccc-cccccc
Confidence 1111122233457899999999999999999999999999999999999999999999999999999999995 999999
Q ss_pred cCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHH
Q psy14338 320 NGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSV 399 (1761)
Q Consensus 320 ~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~ 399 (1761)
.|+++++.+... ..+...+++.+..+.++.+..+| +.. .. ....+++++|.+++| |+++++++.+++.+.
T Consensus 231 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-----~~~~~~~~l~~~~~~--G~~~~~~~~~~~~~~ 300 (514)
T d1amua_ 231 TGASLYIILKDT-INDFVKFEQYINQKEITVITLPP-TYV-VH-----LDPERILSIQTLITA--GSATSPSLVNKWKEK 300 (514)
T ss_dssp TTCEEEECCHHH-HTCHHHHHHHHHHTTCCEEEECH-HHH-TT-----SCTTTCCSCSEEEEE--SSCCCHHHHHHHTTT
T ss_pred cccccccccccc-ccchhhhhhhhhhhhccccccee-eec-cc-----ccccccccccEEEEe--cccCCHHHhhhhccc
Confidence 999999987433 46778889999999999998874 232 21 224568899999999 999999999887664
Q ss_pred hhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe
Q psy14338 400 FQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK 479 (1761)
Q Consensus 400 ~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d 479 (1761)
+ .+++.||+||++.+++..... ........+.|+++++..+.+.|
T Consensus 301 ~--------~~~~~yG~tE~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~v~~~d 345 (514)
T d1amua_ 301 V--------TYINAYGPTETTICATTWVAT---------------------------KETIGHSVPIGAPIQNTQIYIVD 345 (514)
T ss_dssp S--------EEEEEECCGGGSSCSEEEECC---------------------------SSCCCSSCCCBEECTTEEEEEEC
T ss_pred e--------eEEEeeccccCceeeeecccc---------------------------ccccCcccccccceeeeeEeeec
Confidence 3 399999999998765543321 01122356789999999999999
Q ss_pred CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeE
Q psy14338 480 MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLM 559 (1761)
Q Consensus 480 ~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 559 (1761)
++++ ++|.|+.|||+|+||.+++||+++|+.+.++|..+++..+ ++||+|||+|++|+||+|+|+||+||+|
T Consensus 346 ~~~~--~~~~g~~GEl~v~~~~~~~gY~~~~~~~~~~~~~~~~~~~------~~~~~TGD~g~~d~~G~l~i~GR~~d~i 417 (514)
T d1amua_ 346 ENLQ--LKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPG------EKLYKTGDQARWLSDGNIEYLGRIDNQV 417 (514)
T ss_dssp TTSC--BCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTT------SEEEEEEEEEEECTTSCEEEEEEGGGEE
T ss_pred ccce--ecCCCCeeEEEEccCcccccccccccccceeeEeccccCC------CceEEECCEEEECCCCcEEEEecccCEE
Confidence 9987 5999999999999999999999999999999998888644 8999999999999999999999999999
Q ss_pred EECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeE
Q psy14338 560 TVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYC 638 (1761)
Q Consensus 560 ki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~ 638 (1761)
|++|++|+|.+||+.|.+++.| .+|+|++.++ ..++.++|+++++++.+.++++++++++|++|++|..+
T Consensus 418 ~~~G~~i~p~~IE~~l~~~~~V-----~~~~V~~~~~~~~g~~~~a~v~~~~~~~~~~l~~~~~~~l~~~~~p~~i---- 488 (514)
T d1amua_ 418 KIRGHRVELEEVESILLKHMYI-----SETAVSVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEELPTYMIPSYF---- 488 (514)
T ss_dssp EETTEEEEHHHHHHHHTTSTTE-----EEEEEEEEECTTSCEEEEEEEEESSCCCHHHHHHHHHHHSCGGGSCSEE----
T ss_pred EECCEEECHHHHHHHHHhCCCc-----cEEEEEEEECCCCCEEEEEEEEcCCCCCHHHHHHHHHhhCCcccCceEE----
Confidence 9999999999999999998888 7999999985 47789999999999999999999999999999999986
Q ss_pred EEEeCCCCccCCCCCcccHHHHHH
Q psy14338 639 LALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 639 v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
+.+++||+|++|||+|++|++
T Consensus 489 ---~~v~~lP~t~~GKi~R~~L~~ 509 (514)
T d1amua_ 489 ---IQLDKMPLTSNGKIDRKQLPE 509 (514)
T ss_dssp ---EECSSCCBCTTSSBCGGGSCC
T ss_pred ---EEeCCCCCCCCcChhHHhcCC
Confidence 557999999999999999886
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Probab=100.00 E-value=3e-63 Score=645.01 Aligned_cols=502 Identities=15% Similarity=0.233 Sum_probs=386.1
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
..+.++++.|.+.+... +..|+.+|+.. . ..++++||+||+++++++|+.|++. ||++||+|+|+++|++++++
T Consensus 14 ~~~~t~~~~l~~~~~~~--~~~P~~~a~~d--~-~~~~~lTy~el~~~~~~lA~~L~~~-Gi~~Gd~Vai~~~ns~e~~v 87 (541)
T d1lcia_ 14 LEDGTAGEQLHKAMKRY--ALVPGTIAFTD--A-HIEVNITYAEYFEMSVRLAEAMKRY-GLNTNHRIVVCSENSLQFFM 87 (541)
T ss_dssp CCSSCHHHHHHHHHHHH--HTSTTCEEEEE--T-TTCCEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEEECSSCSSTHH
T ss_pred CCCCCHHHHHHHHHHhh--CCCCCeEEEEe--C-CCCeEeeHHHHHHHHHHHHHHHHHc-CcCCCCEEEEEeCCCHHHHH
Confidence 33456676666665411 13377777662 2 3457899999999999999999999 99999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----c-cccc------ccCCcc
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----N-VVDI------KSWPTI 1308 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~-~~~~------~~~~~~ 1308 (1761)
++|||+++|+++|||++.++.+ ++.+++++++++++|++.+..+.+...... . ++.. ..+...
T Consensus 88 ~~lA~~~~G~i~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (541)
T d1lcia_ 88 PVLGALFIGVAVAPANDIYNER------ELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSM 161 (541)
T ss_dssp HHHHHHHHTCEEEECCTTCCHH------HHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTBEEH
T ss_pred HHHHHHHhCeEEEecCCCCCHH------HHHHHHHhccceEEeeeccccccchhccccccccceeeeecCCccccccchh
Confidence 9999999999999998877776 999999999999999999876655443211 0 0000 000000
Q ss_pred c---cC--CCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc---CcCCCCeEEEEeCCc
Q psy14338 1309 L---DT--DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPY 1380 (1761)
Q Consensus 1309 ~---~~--~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~~~~~~~~ 1380 (1761)
. .. ..........+.....++++|||+|||||||.||||+++|++++....+....+ .+.++++++.+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 241 (541)
T d1lcia_ 162 YTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFH 241 (541)
T ss_dssp HHHHHHHSCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTT
T ss_pred hhhhhhhccccccccccCccccCCCCceEEEEeeccccccccccccccchhhhhhhhhhhhccccccccccccccccccc
Confidence 0 00 000000011112334678999999999999999999999999988777665544 466778888888877
Q ss_pred cChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEE
Q psy14338 1381 CGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTC 1460 (1761)
Q Consensus 1381 ~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v 1460 (1761)
|..+. ...+..+..|+.+++... .++......+.++++|.++++|+++..+++.. .....++++|+.+
T Consensus 242 ~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~-------~~~~~~~~~l~~v 309 (541)
T d1lcia_ 242 HGFGM-FTTLGYLICGFRVVLMYR----FEEELFLRSLQDYKIQSALLVPTLFSFFAKST-------LIDKYDLSNLHEI 309 (541)
T ss_dssp SHHHH-HHHHHHHHHTCEEEECSS----CCHHHHHHHHHHTTCSEEECCHHHHHHHHHCS-------CGGGSCCTTCCEE
T ss_pred ccccc-cccccccccccccccccc----cccchhHHHHhhhhccccccCccccccccccc-------cccccccccceEE
Confidence 76665 567777888888887764 68899999999999999999999999987642 2345678899999
Q ss_pred EeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccce
Q psy14338 1461 VVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCL 1540 (1761)
Q Consensus 1461 ~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1540 (1761)
++||+++++ .+.+++.+.++. ..+++.||+||++..++..... ..+.
T Consensus 310 ~~gG~~~~~-~~~~~~~~~~~~-----~~~~~~YG~TE~~~~~~~~~~~---------------------------~~~~ 356 (541)
T d1lcia_ 310 ASGGAPLSK-EVGEAVAKRFHL-----PGIRQGYGLTETTSAILITPEG---------------------------DDKP 356 (541)
T ss_dssp ECTTCCCCH-HHHHHHHHHTTC-----SCCBCEECCGGGSSCSEECCCC------------------------------C
T ss_pred Eeccccccc-ccccccccccCC-----ceeeecCCccccCceEEecCcc---------------------------cCCC
Confidence 999999999 777888777653 4578999999987654432211 1123
Q ss_pred eccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEec
Q psy14338 1541 LESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRR 1620 (1761)
Q Consensus 1541 ~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~ 1620 (1761)
+++|+|++|++++|+|+|++++++.|++|||+|+|++++.||+| +++.+...| .++|||+|||+|++
T Consensus 357 ~svG~p~~~~~~~i~d~d~~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~~~~~~--------~~~~~~~TGDl~~~-- 423 (541)
T d1lcia_ 357 GAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGYVN---NPEATNALI--------DKDGWLHSGDIAYW-- 423 (541)
T ss_dssp CCCBEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETT---BHHHHHHHB--------CTTSCEEEEEEEEE--
T ss_pred CccccccCCCEEEEEECCCCcCCCCCCeEEEEEccCccCCeeCC---Chhhhhhcc--------cCCccccCCCeeEE--
Confidence 46999999999999999989999999999999999999999999 999998887 46899999999999
Q ss_pred cCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-
Q psy14338 1621 TSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD- 1694 (1761)
Q Consensus 1621 ~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~- 1694 (1761)
|+| |. ++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. +++++++|+++
T Consensus 424 ----~~~--------G~----~~~~GR~~d~i~~~G~~v~~~~IE~-~l~~~p~V~~~~v~~~~~~~~g~~~~a~v~~~~ 486 (541)
T d1lcia_ 424 ----DED--------EH----FFIVDRLKSLIKYKGYQVAPAELES-ILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEH 486 (541)
T ss_dssp ----CTT--------CC----EEEC-----CEEETTEEECHHHHHH-HHHTSTTEEEEEEEEEEETTTEEEEEEEEEECT
T ss_pred ----cCC--------eE----EEEeeeecCEEEECCEEECHHHHHH-HHHhCCCccEEEEEEEECCCCCEEEEEEEEECC
Confidence 999 99 9999999999999999999999999 8999999999999974 34788888874
Q ss_pred CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1695 GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1695 ~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
+...+.++|+++|+++ |++.+|+|..|++++ +||+|++|||||++|++++.+.+
T Consensus 487 ~~~~~~~~l~~~~~~~-l~~~~~~p~~i~~v~--~lP~t~~GKi~r~~l~~~~~~~~ 540 (541)
T d1lcia_ 487 GKTMTEKEIVDYVASQ-VTTAKKLRGGVVFVD--EVPKGLTGKLDARKIREILIKAK 540 (541)
T ss_dssp TCCCCHHHHHHHHHHH-SCGGGSCTTEEEEES--SCCC-----CCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHh-CCccccCCcEEEEeC--CCCcCCCcCccHHHHHHHHHHhC
Confidence 4566778999999998 664778999999999 99999999999999999986643
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.1e-64 Score=652.74 Aligned_cols=503 Identities=18% Similarity=0.193 Sum_probs=365.5
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+.+. ++||++|+++.+. ++.+++||+||+++++++|++|.+. |+++||+|+|+++|++++++++|
T Consensus 11 ~~l~~~l~~~a~-----~~pd~~av~~~~~-g~~~~~Ty~el~~~~~~~A~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~l 83 (534)
T d1v25a_ 11 LNLWDFLERAAA-----LFGRKEVVSRLHT-GEVHRTTYAEVYQRARRLMGGLRAL-GVGVGDRVATLGFNHFRHLEAYF 83 (534)
T ss_dssp CCTHHHHHHHHH-----HSTTCEEEEECTT-SCEEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHHHHH
T ss_pred CCHHHHHHHHHH-----HcCCCeEEEEecC-CceEEEcHHHHHHHHHHHHHHHHHC-CcCCCCEEEEEeCCCHHHHHHHH
Confidence 357776666654 7899999997664 3557899999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccc-cc--cccCCccccCCCC--ccc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNV-VD--IKSWPTILDTDDM--PKK 1317 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~--~~~ 1317 (1761)
||+++|++++|++|.++.+ ++.++++++++++++++............... +. ............. ...
T Consensus 84 A~~~~G~v~vpl~~~~~~~------~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (534)
T d1v25a_ 84 AVPGMGAVLHTANPRLSPK------EIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEAL 157 (534)
T ss_dssp HHHHTTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEHHHHC
T ss_pred HHHHhCcEEEecCCCCCHH------HHHHHHHhhccccccccchhhhhHHHHhhcccccceeEEeecccccccccccccc
Confidence 9999999999999977666 99999999999999999887776655432211 00 0000000000000 000
Q ss_pred hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHH--HHcCcCCCCeEEEEeCCccChhHHHHHHHHhhc
Q psy14338 1318 KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK--LACELYPSRHIALCLDPYCGLGFALWVLSSVYS 1395 (1761)
Q Consensus 1318 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~ 1395 (1761)
..........++++++|+|||||||.||||+++|++++....... ..+.+...++++..+|++|..+. ...+.++..
T Consensus 158 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~-~~~~~~~~~ 236 (534)
T d1v25a_ 158 GEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAW-CLPYAATLV 236 (534)
T ss_dssp CSCCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHH-THHHHHHHH
T ss_pred cccccccccccCCcEEEEEecCCCCCccccccccchhhhhhhhhhhhcccccccccccccccchhhhccc-cccceeeee
Confidence 011122345678999999999999999999999999987664433 34455677788888887777666 557778888
Q ss_pred CceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHH
Q psy14338 1396 GHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSA 1475 (1761)
Q Consensus 1396 G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~ 1475 (1761)
|+++++.++ .+++..+...+.++++|++.++|+++..+++.. .....++++||.+++||+++++ ...++
T Consensus 237 g~~~v~~~~---~~~~~~~~~~~~~~~vt~~~~~p~~~~~~~~~~-------~~~~~~~~~lr~~~~gG~~~~~-~~~~~ 305 (534)
T d1v25a_ 237 GAKQVLPGP---RLDPASLVELFDGEGVTFTAGVPTVWLALADYL-------ESTGHRLKTLRRLVVGGSAAPR-SLIAR 305 (534)
T ss_dssp TCEEEECTT---CCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHH-------HHHTCCCSSCCEEEECSSCCCH-HHHHH
T ss_pred cceeeeccc---cccccccchhhhhccccccccCchhhhhhhhhh-------ccccccccceeEEEEecCCCCH-HHHHH
Confidence 888888775 579999999999999999999999999997642 3456789999999999999998 67666
Q ss_pred HHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEE
Q psy14338 1476 FSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIA 1555 (1761)
Q Consensus 1476 ~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~ 1555 (1761)
+.++ | ..+++.||+||++..+.............. .......+++|+|++|++++|+
T Consensus 306 ~~~~----~---~~i~~~yG~te~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~G~p~~g~~~~i~ 362 (534)
T d1v25a_ 306 FERM----G---VEVRQGYGLTETSPVVVQNFVKSHLESLSE----------------EEKLTLKAKTGLPIPLVRLRVA 362 (534)
T ss_dssp HHHT----T---CEEEEEEECGGGSSEEEECCCCGGGTTSCH----------------HHHHHHHTSCBEECTTCEEEEE
T ss_pred HHHh----C---CeeeeeccccccccceeecccCccccccCc----------------cccccccccceeccCCcEEEEE
Confidence 6543 3 479999999999887766544322111100 0001123569999999999999
Q ss_pred cCCCCCCCCC--CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCC
Q psy14338 1556 NPETKGQCGD--SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633 (1761)
Q Consensus 1556 d~~~~~~~p~--G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~ 1633 (1761)
|++ ++.+|. |++|||+|+|++++.||+| +|+.|++.| ..+|||+|||+|++ ++|
T Consensus 363 d~~-~~~~~~~~~~~Gel~v~g~~v~~gY~~---~~~~t~~~~--------~~dg~~~TGDlg~~------~~~------ 418 (534)
T d1v25a_ 363 DEE-GRPVPKDGKALGEVQLKGPWITGGYYG---NEEATRSAL--------TPDGFFRTGDIAVW------DEE------ 418 (534)
T ss_dssp CTT-SCBCCSSSCCCEEEEEESTTSBSSCBT---CHHHHHTTB--------CTTSCEEEEEEEEE------CTT------
T ss_pred CCC-CCCCCCCCCeeEEEEEcCCcccceecC---Chhhhhhhc--------ccCCCCccCceeEE------CCC------
Confidence 966 777766 7899999999999999999 999999998 46889999999999 999
Q ss_pred CCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHH-H
Q psy14338 1634 GVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPL-V 1707 (1761)
Q Consensus 1634 g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~-l 1707 (1761)
|+ ++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++|+|+.++.....+++++. +
T Consensus 419 --G~----l~~~GR~~~~i~~~G~~v~~~eIE~-~l~~~~~V~~a~v~~~~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~ 491 (534)
T d1v25a_ 419 --GY----VEIKDRLKDLIKSGGEWISSVDLEN-ALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEHLL 491 (534)
T ss_dssp --CC----EEEEEESSCEEEETTEEEEHHHHHC-C----------CEEEEECSSSSEEEEECC-----------------
T ss_pred --cc----EEEecccccEEEECCEEECHHHHHH-HHHhCCCcceEEEEEEECCCCCeEEEEEEEeCCCCCCHHHHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 44788888876655555666665 5
Q ss_pred HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1708 ~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
++ .|| .|++|+.|++++ +||+|++|||||++|++++.
T Consensus 492 ~~-~l~-~~~~P~~i~~~~--~lP~t~~GKi~R~~lr~~~~ 528 (534)
T d1v25a_ 492 KA-GFA-KWQLPDAYVFAE--EIPRTSAGKFLKRALREQYK 528 (534)
T ss_dssp ---CCC-TTTSCSBC----------------CCTTHHHHST
T ss_pred Hh-cCC-cCCCccEEEEEC--CCCCCCCccccHHHHHHHHH
Confidence 55 488 999999999999 99999999999999999874
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=4e-63 Score=643.07 Aligned_cols=493 Identities=17% Similarity=0.202 Sum_probs=405.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
++||+++|+++|+++||++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++
T Consensus 24 ~~tl~~~l~~~a~~~pd~~Al~~~~------~~~Ty~el~~~v~~~A~~L~--------~~Gv~~gd~V~i~~~n~--~~ 87 (536)
T d1mdba_ 24 GETFGDLLRDRAAKYGDRIAITCGN------THWSYRELDTRADRLAAGFQ--------KLGIQQKDRVVVQLPNI--KE 87 (536)
T ss_dssp SCCHHHHHHHHHHHHTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEECCCSS--HH
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECC------EeEcHHHHHHHHHHHHHHHH--------HcCcCCcCEEEEEeCCC--HH
Confidence 3689999999999999999999765 69999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----------cceeccCCCc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----------EVVAFKGWPK 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----------~~~~~~~~~~ 229 (1761)
+++++|||+++|+++||++|.++.+ ++.+++++++++++++++............ ..+.......
T Consensus 88 ~~v~~lA~~~~G~i~vpl~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (536)
T d1mdba_ 88 FFEVIFALFRLGALPVFALPSHRSS-----EITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEE 162 (536)
T ss_dssp HHHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCTT
T ss_pred HHHHHHHHHHhCcEEEecCCCCCHH-----HHHHHHHhhccceEeccchhhhhhhhhhhhhhhhccccccceeeeecccc
Confidence 9999999999999999999999976 899999999999999987644322111100 0000000000
Q ss_pred ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
. .................++|+|+|+|||||||+||||++||+++.+.+......+++.++|+++++.|+.|.++
T Consensus 163 --~---~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 237 (536)
T d1mdba_ 163 --F---LPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYP 237 (536)
T ss_dssp --S---EEGGGCCCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHH
T ss_pred --c---cchhhcccCCcCCCccCccchHHhhhcccccccceecccccccccccccccccccccccccccccccccccccc
Confidence 0 00111112222344568899999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHhc-CcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 310 LWHSVLTSVLN-GMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 310 ~~~~i~~~L~~-G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
+...++..++. |.+++..+ .+++..+...+.+++++.+..+|+ .+..+..........++++|.+++| |+++
T Consensus 238 l~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g--G~~~ 310 (536)
T d1mdba_ 238 LSSPGVLGVLYAGGRVVLSP----SPSPDDAFPLIEREKVTITALVPP-LAMVWMDAASSRRDDLSSLQVLQVG--GAKF 310 (536)
T ss_dssp HHSSHHHHHHHTTCEEEECS----SSSHHHHHHHHHHHTCSEEEECHH-HHHHHHHHHHHCCCCCTTCCEEEEE--SSCC
T ss_pred eeeccccccccccccccccC----CCCHHHHHHHHhhhccccccccch-hhhhhhhhccccccccCcceeEEEe--cccc
Confidence 76434444444 55555555 789999999999999999999965 5555555444455678999999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++...+++.+.+ |.. .+..||.+|++........ .......++|+
T Consensus 311 ~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~g~ 355 (536)
T d1mdba_ 311 SAEAARRVKAVF---GCT---LQQVFGMAEGLVNYTRLDD-----------------------------PEEIIVNTQGK 355 (536)
T ss_dssp CHHHHTTHHHHT---CSE---EEEEEECTTSCEEECCTTS-----------------------------CHHHHHHCCCE
T ss_pred ccccccchhhcc---Cce---eeecccccccccccccccc-----------------------------ccccccCCccc
Confidence 999999999988 432 7888888888755443221 11234678999
Q ss_pred CCC-CcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 469 VMP-GCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 469 p~~-~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
|++ +..+.|.+++++ +++.|+.|||+|+|+.+++||+++++.+...|. .++||+|||++++++||
T Consensus 356 p~~~~~~~~v~~~~g~--~~~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~------------~~~~~~tGD~~~~~~dG 421 (536)
T d1mdba_ 356 PMSPYDESRVWDDHDR--DVKPGETGHLLTRGPYTIRGYYKAEEHNAASFT------------EDGFYRTGDIVRLTRDG 421 (536)
T ss_dssp ESSTTCEEEEECTTSC--BCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBC------------TTSCEEEEEEEEECTTS
T ss_pred CCCCcceEEEEcCCCC--eecccccceeecCCCcccccccccccccccccc------------ccCccccCccccccCCC
Confidence 986 555666666665 699999999999999999999999999988884 47999999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC-CCHHHHHHHHHHH-
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD-CSEEESFQWMSRV- 624 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~-~~~~~l~~~l~~~- 624 (1761)
+|+|+||+||+||++|+||+|.|||+.|.+++.| .+|+|++.++ ..++.++|+|++.++ .+.++++++++++
T Consensus 422 ~l~~~GR~~d~i~~~G~~i~p~~IE~~l~~~p~V-----~~a~vvg~~~~~~g~~~~a~v~~~~~~~~~~~l~~~l~~~~ 496 (536)
T d1mdba_ 422 YIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAV-----HDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERG 496 (536)
T ss_dssp CEEEEEEGGGCEECSSCEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEESSSCCCHHHHHHHHHHTT
T ss_pred ceecCCCcceEEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEEcCCCCeEEEEEEEECCCCCCHHHHHHHHHhcC
Confidence 9999999999999999999999999999998888 7999999985 467889999998764 6788999999986
Q ss_pred HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 625 LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 625 Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
||.||+|+.+ +.+++||+|+||||||++|++.+.+
T Consensus 497 l~~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 531 (536)
T d1mdba_ 497 LAAYKIPDRV-------EFVESFPQTGVGKVSKKALREAISE 531 (536)
T ss_dssp CCGGGSCSEE-------EECSSCCBCTTSCBCHHHHHHHHHH
T ss_pred CCcCcCccEE-------EEECCCCcCCCcCccHHHHHHHHHH
Confidence 9999999986 5569999999999999999998753
|
| >d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Phenylalanine activating domain of gramicidin synthetase 1 species: Bacillus brevis [TaxId: 1393]
Probab=100.00 E-value=9.2e-62 Score=626.50 Aligned_cols=491 Identities=16% Similarity=0.203 Sum_probs=404.7
Q ss_pred cCCCCc-ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcC
Q psy14338 1154 TGNTGE-LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFP 1232 (1761)
Q Consensus 1154 ~~~~~~-~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~ 1232 (1761)
|.+..+ +...|++++|.++++ ++||++|++ ++++++||+||+++++++|+.|++. |+++||+|+|+++
T Consensus 13 ~~~~~~~~~~~tl~~l~~~~a~-----~~Pd~~Al~-----~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~gd~Vai~~~ 81 (514)
T d1amua_ 13 NNTKAEYPRDKTIHQLFEEQVS-----KRPNNVAIV-----CENEQLTYHELNVKANQLARIFIEK-GIGKDTLVGIMME 81 (514)
T ss_dssp TCCCCCCCTTCCHHHHHHHHHH-----HCTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECC
T ss_pred cCCCCCCCCCCcHHHHHHHHHH-----hCCCCeEEE-----ECCeeEcHHHHHHHHHHHHHHHHHc-CcCCcCEEEEEeC
Confidence 555554 345788999988886 789999999 6789999999999999999999999 9999999999999
Q ss_pred CCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCC
Q psy14338 1233 PGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTD 1312 (1761)
Q Consensus 1233 ~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1312 (1761)
|++++++++|||+++|++++|++|.++.+ ++.+++++++++++|++......+...............
T Consensus 82 n~~~~v~~~la~~~~G~v~v~l~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~------ 149 (514)
T d1amua_ 82 KSIDLFIGILAVLKAGGAYVPIDIEYPKE------RIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFEED------ 149 (514)
T ss_dssp SSHHHHHHHHHHHHTTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEEECCCS------
T ss_pred CCHHHHHHHHHHHHhCcEEEEeCCCCCHH------HHHHHHhccCCcEEEEehhhhhhhhhhcccccccccccc------
Confidence 99999999999999999999998877666 999999999999999999887766544322111111000
Q ss_pred CCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1313 DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1313 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
............+..++++++|+|||||||.||||+++|+++...+......+++..+++++...+++|..++ ..++..
T Consensus 150 ~~~~~~~~~~~~p~~~~d~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~ 228 (514)
T d1amua_ 150 TIKIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASV-WEMFMA 228 (514)
T ss_dssp TTTTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHH-HHHHHH
T ss_pred cccccccccCCCCCCcccceEEEEccCCCCCcccccccccccccccccccccccccccccccceecccccccc-cccccc
Confidence 0011111122344578899999999999999999999999999999999999999999998888888888776 668888
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHL 1472 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l 1472 (1761)
++.|+++++.+... ..+...+++.+..+.++.+..+|...... ...++++++.+++||+++++ .+
T Consensus 229 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~~~~G~~~~~-~~ 293 (514)
T d1amua_ 229 LLTGASLYIILKDT-INDFVKFEQYINQKEITVITLPPTYVVHL-------------DPERILSIQTLITAGSATSP-SL 293 (514)
T ss_dssp HTTTCEEEECCHHH-HTCHHHHHHHHHHTTCCEEEECHHHHTTS-------------CTTTCCSCSEEEEESSCCCH-HH
T ss_pred cccccccccccccc-ccchhhhhhhhhhhhcccccceeeecccc-------------cccccccccEEEEecccCCH-HH
Confidence 99999999887532 46788899999999999999999765432 45678999999999999999 55
Q ss_pred HHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEE
Q psy14338 1473 TSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKV 1552 (1761)
Q Consensus 1473 ~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 1552 (1761)
.+++.+ ...+++.||+||++.++........ .....++.|+++++..+
T Consensus 294 ~~~~~~--------~~~~~~~yG~tE~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~v 341 (514)
T d1amua_ 294 VNKWKE--------KVTYINAYGPTETTICATTWVATKE------------------------TIGHSVPIGAPIQNTQI 341 (514)
T ss_dssp HHHHTT--------TSEEEEEECCGGGSSCSEEEECCSS------------------------CCCSSCCCBEECTTEEE
T ss_pred hhhhcc--------ceeEEEeeccccCceeeeecccccc------------------------ccCcccccccceeeeeE
Confidence 554433 2578999999998765543222111 01123458999999999
Q ss_pred EEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCC
Q psy14338 1553 IIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVP 1632 (1761)
Q Consensus 1553 ~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~ 1632 (1761)
.+.|++ ++++|.|+.|||+|+||.++.||++ +|+.+.+.|..+++. +++|||+|||+|++ |+|
T Consensus 342 ~~~d~~-~~~~~~g~~GEl~v~~~~~~~gY~~---~~~~~~~~~~~~~~~--~~~~~~~TGD~g~~------d~~----- 404 (514)
T d1amua_ 342 YIVDEN-LQLKSVGEAGELCIGGEGLARGYWK---RPELTSQKFVDNPFV--PGEKLYKTGDQARW------LSD----- 404 (514)
T ss_dssp EEECTT-SCBCCTTCEEEEEEEETTCCCEETT---CHHHHHHHEEECSSS--TTSEEEEEEEEEEE------CTT-----
T ss_pred eeeccc-ceecCCCCeeEEEEccCcccccccc---cccccceeeEecccc--CCCceEEECCEEEE------CCC-----
Confidence 999954 8999999999999999999999999 999999999887765 47899999999999 999
Q ss_pred CCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCCchhHhhHHHHH
Q psy14338 1633 PGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLV 1707 (1761)
Q Consensus 1633 ~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~~~~~~~l~~~l 1707 (1761)
|+ |+|+||+||+||++|++|+|.|||+ +|.+||+|.+|+|++.. +.++|+|+.+. ..+.++|++++
T Consensus 405 ---G~----l~i~GR~~d~i~~~G~~i~p~~IE~-~l~~~~~V~~~~V~~~~~~~~g~~~~a~v~~~~-~~~~~~l~~~~ 475 (514)
T d1amua_ 405 ---GN----IEYLGRIDNQVKIRGHRVELEEVES-ILLKHMYISETAVSVHKDHQEQPYLCAYFVSEK-HIPLEQLRQFS 475 (514)
T ss_dssp ---SC----EEEEEEGGGEEEETTEEEEHHHHHH-HHTTSTTEEEEEEEEEECTTSCEEEEEEEEESS-CCCHHHHHHHH
T ss_pred ---Cc----EEEEecccCEEEECCEEECHHHHHH-HHHhCCCccEEEEEEEECCCCCEEEEEEEEcCC-CCCHHHHHHHH
Confidence 99 9999999999999999999999999 89999999999999853 37888888754 45778999999
Q ss_pred HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1708 ~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
+++ |+ .|++|..|++++ +||+|++|||+|++|++
T Consensus 476 ~~~-l~-~~~~p~~i~~v~--~lP~t~~GKi~R~~L~~ 509 (514)
T d1amua_ 476 SEE-LP-TYMIPSYFIQLD--KMPLTSNGKIDRKQLPE 509 (514)
T ss_dssp HHH-SC-GGGSCSEEEECS--SCCBCTTSSBCGGGSCC
T ss_pred Hhh-CC-cccCceEEEEeC--CCCCCCCcChhHHhcCC
Confidence 987 88 999999999999 99999999999999987
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=4.1e-61 Score=624.09 Aligned_cols=492 Identities=16% Similarity=0.175 Sum_probs=396.9
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
+.|+++.|.++++ ++||++|++ ++++++||+||+++++++|+.|.+. |+++||+|+|+++|++++++++
T Consensus 24 ~~tl~~~l~~~a~-----~~pd~~Al~-----~~~~~~Ty~el~~~v~~~A~~L~~~-Gv~~gd~V~i~~~n~~~~~v~~ 92 (536)
T d1mdba_ 24 GETFGDLLRDRAA-----KYGDRIAIT-----CGNTHWSYRELDTRADRLAAGFQKL-GIQQKDRVVVQLPNIKEFFEVI 92 (536)
T ss_dssp SCCHHHHHHHHHH-----HHTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEECCCSSHHHHHHH
T ss_pred CCCHHHHHHHHHH-----HCCCCeEEE-----ECCEeEcHHHHHHHHHHHHHHHHHc-CcCCcCEEEEEeCCCHHHHHHH
Confidence 3578888888876 779999999 6789999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHH-----Hhhhc-cc----cccccccCCccccC
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKL-----LKSKE-AS----NVVDIKSWPTILDT 1311 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~-----~~~~~-~~----~~~~~~~~~~~~~~ 1311 (1761)
|||+++|+++|||+|.++.+ ++.++++++++++++++...... ..... .. ..+...........
T Consensus 93 lA~~~~G~i~vpl~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (536)
T d1mdba_ 93 FALFRLGALPVFALPSHRSS------EITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPL 166 (536)
T ss_dssp HHHHHHTCEEEECCTTCCHH------HHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCTTSEEG
T ss_pred HHHHHhCcEEEecCCCCCHH------HHHHHHHhhccceEeccchhhhhhhhhhhhhhhhccccccceeeeeccccccch
Confidence 99999999999999976666 99999999999999987532110 00000 00 00000000111000
Q ss_pred CCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1312 DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1312 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
.+.. ..........++|+++|+|||||||.||||++||+++.+.+......+++.++|+++...+++|.+++...++.
T Consensus 167 ~~~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~~~~~ 244 (536)
T d1mdba_ 167 EDLH--TEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVL 244 (536)
T ss_dssp GGCC--CCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHH
T ss_pred hhcc--cCCcCCCccCccchHHhhhcccccccceecccccccccccccccccccccccccccccccccccccceeecccc
Confidence 1000 01112235678999999999999999999999999999999999999999999999999999998887555555
Q ss_pred Hhhc-CceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChH
Q psy14338 1392 SVYS-GHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRI 1470 (1761)
Q Consensus 1392 ~L~~-G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~ 1470 (1761)
.++. |.+++..+ .+++..++..+++++++.+..+|+.+..+... .......+++++.+++||+++++
T Consensus 245 ~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~gG~~~~~- 312 (536)
T d1mdba_ 245 GVLYAGGRVVLSP----SPSPDDAFPLIEREKVTITALVPPLAMVWMDA-------ASSRRDDLSSLQVLQVGGAKFSA- 312 (536)
T ss_dssp HHHHTTCEEEECS----SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHH-------HHHCCCCCTTCCEEEEESSCCCH-
T ss_pred ccccccccccccC----CCCHHHHHHHHhhhccccccccchhhhhhhhh-------ccccccccCcceeEEEecccccc-
Confidence 5555 45555444 47999999999999999999999999988663 23456678999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCc
Q psy14338 1471 HLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGV 1550 (1761)
Q Consensus 1471 ~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 1550 (1761)
.+.+++.+.++ ......||.+|.+..+..... ......+++|+|+++.
T Consensus 313 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~g~p~~~~ 360 (536)
T d1mdba_ 313 EAARRVKAVFG------CTLQQVFGMAEGLVNYTRLDD--------------------------PEEIIVNTQGKPMSPY 360 (536)
T ss_dssp HHHTTHHHHTC------SEEEEEEECTTSCEEECCTTS--------------------------CHHHHHHCCCEESSTT
T ss_pred ccccchhhccC------ceeeecccccccccccccccc--------------------------ccccccCCcccCCCCc
Confidence 77777777664 456667777765433221111 1112235699998755
Q ss_pred EEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCC
Q psy14338 1551 KVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAP 1630 (1761)
Q Consensus 1551 ~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~ 1630 (1761)
...+++.+++++++.|+.|||+|+|+.+++||++ +++.+...| ..+|||+|||+|++ ++|
T Consensus 361 ~~~~v~~~~g~~~~~~~~Gel~v~g~~~~~gY~~---~~~~~~~~~--------~~~~~~~tGD~~~~------~~d--- 420 (536)
T d1mdba_ 361 DESRVWDDHDRDVKPGETGHLLTRGPYTIRGYYK---AEEHNAASF--------TEDGFYRTGDIVRL------TRD--- 420 (536)
T ss_dssp CEEEEECTTSCBCCTTCCEEEEEECTTSCSSCTT---CHHHHHHHB--------CTTSCEEEEEEEEE------CTT---
T ss_pred ceEEEEcCCCCeecccccceeecCCCcccccccc---ccccccccc--------cccCccccCccccc------cCC---
Confidence 5555554669999999999999999999999999 999999888 56899999999999 999
Q ss_pred CCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHH
Q psy14338 1631 VPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVP 1705 (1761)
Q Consensus 1631 ~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~ 1705 (1761)
|+ |+|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++|+|+..+...+.++|++
T Consensus 421 -----G~----l~~~GR~~d~i~~~G~~i~p~~IE~-~l~~~p~V~~a~vvg~~~~~~g~~~~a~v~~~~~~~~~~~l~~ 490 (536)
T d1mdba_ 421 -----GY----IVVEGRAKDQINRGGEKVAAEEVEN-HLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKA 490 (536)
T ss_dssp -----SC----EEEEEEGGGCEECSSCEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEESSSCCCHHHHHH
T ss_pred -----Cc----eecCCCcceEEEECCEEECHHHHHH-HHHhCCCccEEEEEEEEcCCCCeEEEEEEEECCCCCCHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 3478899988777778889999
Q ss_pred HHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1706 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1706 ~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+++++.|| .||+|+.|++++ +||+|+||||||++|++++.+
T Consensus 491 ~l~~~~l~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~~ 531 (536)
T d1mdba_ 491 FLRERGLA-AYKIPDRVEFVE--SFPQTGVGKVSKKALREAISE 531 (536)
T ss_dssp HHHHTTCC-GGGSCSEEEECS--SCCBCTTSCBCHHHHHHHHHH
T ss_pred HHHhcCCC-cCcCccEEEEEC--CCCcCCCcCccHHHHHHHHHH
Confidence 99986688 999999999999 999999999999999999853
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Probab=100.00 E-value=1.1e-58 Score=595.66 Aligned_cols=489 Identities=15% Similarity=0.168 Sum_probs=392.6
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
+||+++|+++|+++||++|+.+.+.+ +++||+||+++++++|++|+ +.|+++||+|+|+++|+ ++|
T Consensus 2 ~ti~~~l~~~a~~~pd~~al~~~~~~----~~~Ty~el~~~~~~~a~~L~--------~~Gv~~gd~V~i~~~n~--~~~ 67 (503)
T d3cw9a1 2 QTVNEMLRRAATRAPDHCALAVPARG----LRLTHAELRARVEAVAARLH--------ADGLRPQQRVAVVAPNS--ADV 67 (503)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEEGGGT----EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSC--HHH
T ss_pred CCHHHHHHHHHHhCCCCeEEEECCCC----cEEeHHHHHHHHHHHHHHHH--------HcCcCCCCEEEEEeCCC--HHH
Confidence 58999999999999999999986532 68999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccC---cccccccceeccCCCcceeEEecc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGL---PKTAAGEVVAFKGWPKLTWFVTEH 237 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1761)
++++|||+++|++++||+|.++++ ++++++++++++++|++....... .......++.+.+. ..+.
T Consensus 68 ~~~~lA~~~~G~v~vpi~~~~~~~-----~i~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~ 136 (503)
T d3cw9a1 68 VIAILALHRLGAVPALLNPRLKSA-----ELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIFLGDL------VRDG 136 (503)
T ss_dssp HHHHHHHHHHTCEEEEECTTSCHH-----HHHHHHHHTTCSEEEESSCHHHHHHHHHTTCCCEEEEHHHH------EETT
T ss_pred HHHHHHHHHhCcEEEEeCCCCCHH-----HHHHHHHhcCCcEEEeecchHHHHHHhhhccccccccchhh------hhhh
Confidence 999999999999999999999976 899999999999999987532110 01111111111100 0010
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCC--CCCCeEEEccCCcchhhhHHHHH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHY--TEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
...............+++++||+|||||||.||||+++|+++...+......+.. ...++++.++|+.|..+.....+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 216 (503)
T d3cw9a1 137 EPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLV 216 (503)
T ss_dssp EECCCSCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEGGGHHHHHHHHHHTSCCCSSTTCEEEECSCTTSHHHHHTTHH
T ss_pred cccccCCccccccchhhhhhhhcccccccccccccccccchhhhhhhhccccccccccccccccccCccccccccccccc
Confidence 0111111223345678999999999999999999999999999999888776654 45589999999999888876677
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC--CCCCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT--KDHKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~--~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
.+...|+++++.+ .+++..+...+..++++++..+|. ....++.. .......+++||.+++| |++++++..
T Consensus 217 ~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Lr~i~~g--G~~~~~~~~ 289 (503)
T d3cw9a1 217 AALALDGTYVVVE----EFRPVDALQLVQQEQVTSLFATPT-HLDALAAAAAHAGSSLKLDSLRHVTFA--GATMPDAVL 289 (503)
T ss_dssp HHHHTTCEEEECS----SCCHHHHHHHHHHHTCCEEEECHH-HHHHHHHHHHHTCTTCCCTTCCEEEEC--SSCCCHHHH
T ss_pred ccccccccccccc----ccChHHhhhhhhhceeeccccccc-cccccccccccccccccccceEEEEec--ccccccccc
Confidence 7778888888887 689999999999999999999864 44433222 22334557899999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
..|...++. .+.+.||.||++..+...... .....+.+.+.+..
T Consensus 290 ~~~~~~~~~------~~~~~yg~~e~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~ 333 (503)
T d3cw9a1 290 ETVHQHLPG------EKVNIYGTTEAMNSLYMRQPK------------------------------TGTEMAPGFFSEVR 333 (503)
T ss_dssp HHHHHHCCS------EEEEEEEETTTEEEEEEESCS------------------------------SSSEEBCCTTCCEE
T ss_pred ccccccccc------cccccccccccceeeeecccc------------------------------ccccccccccccce
Confidence 999988743 399999999998766544321 11123344445455
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecC-CccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEE
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVAST-GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~-~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~ 552 (1761)
...+.+..++ .++.|+.|++++.+. ....||+++++.|+++|. +|||+|||+|++++||.|+|+
T Consensus 334 ~~~~~~~~~~--~~~~g~~g~~~~~~~~~~~~~~~~~~~~t~~~~~-------------~g~~~TgD~g~~~~dG~l~~~ 398 (503)
T d3cw9a1 334 IVRIGGGVDE--IVANGEEGELIVAASDSAFVGYLNQPQATAEKLQ-------------DGWYRTSDVAVWTPEGTVRIL 398 (503)
T ss_dssp EECTTSCTTC--BCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEE-------------TTEEEEEEEEEECTTSCEEEE
T ss_pred eeeeecccCc--ccCCCccccccccccccccccccCChhhhHHHhc-------------CCceecccccccccCCeEEeC
Confidence 5555555554 589999998887755 566789999999999995 789999999999999999999
Q ss_pred eccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHH-HHHHHh
Q psy14338 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMS-RVLQAV 628 (1761)
Q Consensus 553 GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~-~~Lp~y 628 (1761)
||+||+||++|+||+|.|||+.|.+++.| .+|+|++.+++ .++.++|||+++.+ .+.++++++++ ++||.|
T Consensus 399 GR~~d~ik~~G~~v~~~~IE~~l~~~p~V-----~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~ 473 (503)
T d3cw9a1 399 GRVDDMIISGGENIHPSEIERVLGTAPGV-----TEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELADF 473 (503)
T ss_dssp EESSCCEEETTEEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHSSSCGG
T ss_pred CCcCCeEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEECCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999988887 79999999864 56789999998654 67899999995 579999
Q ss_pred hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHH
Q psy14338 629 DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664 (1761)
Q Consensus 629 ~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~ 664 (1761)
++|+.| +.+++||+|+||||||++|++++
T Consensus 474 ~~P~~i-------~~v~~~P~t~~GKi~R~~L~~~~ 502 (503)
T d3cw9a1 474 KRPKRY-------FILDQLPKNALNKVLRRQLVQQV 502 (503)
T ss_dssp GSCSEE-------EECSCCCBCTTSCBCHHHHHHHH
T ss_pred CCccEE-------EEECCCCcCCCcCccHHHHHHhc
Confidence 999986 55799999999999999999875
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Probab=100.00 E-value=2.9e-57 Score=582.40 Aligned_cols=489 Identities=16% Similarity=0.173 Sum_probs=385.5
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
+|+++.|.++++ ++||++|+.+.+ +++++||+||+++++++|++|++. |+++||+|+|+++|++++++++|
T Consensus 2 ~ti~~~l~~~a~-----~~pd~~al~~~~---~~~~~Ty~el~~~~~~~a~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~l 72 (503)
T d3cw9a1 2 QTVNEMLRRAAT-----RAPDHCALAVPA---RGLRLTHAELRARVEAVAARLHAD-GLRPQQRVAVVAPNSADVVIAIL 72 (503)
T ss_dssp CCHHHHHHHHHH-----HSTTSEEEEEGG---GTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSCHHHHHHHH
T ss_pred CCHHHHHHHHHH-----hCCCCeEEEECC---CCcEEeHHHHHHHHHHHHHHHHHc-CcCCCCEEEEEeCCCHHHHHHHH
Confidence 467778887776 779999998533 357899999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHh---hhccccccccccCCccccCCCCccchh
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLK---SKEASNVVDIKSWPTILDTDDMPKKKL 1319 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1319 (1761)
||+++|++++||+|.+|.+ ++++++++++++++|++........ .......+... +............
T Consensus 73 A~~~~G~v~vpi~~~~~~~------~i~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~ 143 (503)
T d3cw9a1 73 ALHRLGAVPALLNPRLKSA------ELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIFLG---DLVRDGEPYSYGP 143 (503)
T ss_dssp HHHHHTCEEEEECTTSCHH------HHHHHHHHTTCSEEEESSCHHHHHHHHHTTCCCEEEEHH---HHEETTEECCCSC
T ss_pred HHHHhCcEEEEeCCCCCHH------HHHHHHHhcCCcEEEeecchHHHHHHhhhccccccccch---hhhhhhcccccCC
Confidence 9999999999999977766 9999999999999998865432211 11111111111 0000000000011
Q ss_pred hhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCc--CCCCeEEEEeCCccChhHHHHHHHHhhcCc
Q psy14338 1320 AALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL--YPSRHIALCLDPYCGLGFALWVLSSVYSGH 1397 (1761)
Q Consensus 1320 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~ 1397 (1761)
.......++++++||+|||||||.||+|+++|+++...+......+.. ...+..+..++++|..+.....+.+...++
T Consensus 144 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 223 (503)
T d3cw9a1 144 PIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDG 223 (503)
T ss_dssp CCCCCCCCTTSEEEEEEECCSSSSCEEEEEEGGGHHHHHHHHHHTSCCCSSTTCEEEECSCTTSHHHHHTTHHHHHHTTC
T ss_pred ccccccchhhhhhhhcccccccccccccccccchhhhhhhhccccccccccccccccccCcccccccccccccccccccc
Confidence 112245678999999999999999999999999999999888876654 444677778887777777666777888888
Q ss_pred eEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHH
Q psy14338 1398 HSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFS 1477 (1761)
Q Consensus 1398 ~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~ 1477 (1761)
++++.++ +++..+...+.+++++++..+|+.+..+..... .......+++||.+++||+++++ .+..++.
T Consensus 224 ~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Lr~i~~gG~~~~~-~~~~~~~ 293 (503)
T d3cw9a1 224 TYVVVEE----FRPVDALQLVQQEQVTSLFATPTHLDALAAAAA-----HAGSSLKLDSLRHVTFAGATMPD-AVLETVH 293 (503)
T ss_dssp EEEECSS----CCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHH-----HTCTTCCCTTCCEEEECSSCCCH-HHHHHHH
T ss_pred ccccccc----cChHHhhhhhhhceeeccccccccccccccccc-----cccccccccceEEEEeccccccc-ccccccc
Confidence 8888774 799999999999999999999999988866421 22345667899999999999999 7777777
Q ss_pred HHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcC
Q psy14338 1478 KLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP 1557 (1761)
Q Consensus 1478 ~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~ 1557 (1761)
..++ ..+.+.||.+|++..+........ ...+.+.+.+.....+.+
T Consensus 294 ~~~~------~~~~~~yg~~e~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~- 339 (503)
T d3cw9a1 294 QHLP------GEKVNIYGTTEAMNSLYMRQPKTG---------------------------TEMAPGFFSEVRIVRIGG- 339 (503)
T ss_dssp HHCC------SEEEEEEEETTTEEEEEEESCSSS---------------------------SEEBCCTTCCEEEECTTS-
T ss_pred cccc------ccccccccccccceeeeecccccc---------------------------ccccccccccceeeeeec-
Confidence 6654 468899999998765443222110 012234444444444444
Q ss_pred CCCCCCCCCcceEEEEcC-CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCC
Q psy14338 1558 ETKGQCGDSHLGEIWVQS-PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVS 1636 (1761)
Q Consensus 1558 ~~~~~~p~G~~GEL~i~g-~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G 1636 (1761)
+.++.++.|+.|++++.+ +....||++ +++.|.+.| .+|||+|||+|++ |+| |
T Consensus 340 ~~~~~~~~g~~g~~~~~~~~~~~~~~~~---~~~~t~~~~---------~~g~~~TgD~g~~------~~d--------G 393 (503)
T d3cw9a1 340 GVDEIVANGEEGELIVAASDSAFVGYLN---QPQATAEKL---------QDGWYRTSDVAVW------TPE--------G 393 (503)
T ss_dssp CTTCBCCTTCCEEEEEECCTTSCCCBTT---CHHHHHHHE---------ETTEEEEEEEEEE------CTT--------S
T ss_pred ccCcccCCCccccccccccccccccccC---ChhhhHHHh---------cCCceeccccccc------ccC--------C
Confidence 558899999999887765 466678888 999999998 4689999999999 999 9
Q ss_pred cccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHH
Q psy14338 1637 KLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNA 1710 (1761)
Q Consensus 1637 ~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~ 1710 (1761)
+ |+++||+||+||++|+||+|.|||+ ++.+||+|.+|+|++. ++.+++||+.+ +...+.+++++++++.
T Consensus 394 ~----l~~~GR~~d~ik~~G~~v~~~~IE~-~l~~~p~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~ 468 (503)
T d3cw9a1 394 T----VRILGRVDDMIISGGENIHPSEIER-VLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSS 468 (503)
T ss_dssp C----EEEEEESSCCEEETTEEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHS
T ss_pred e----EEeCCCcCCeEEECCEEECHHHHHH-HHHhCCCccEEEEEEEECCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhc
Confidence 9 9999999999999999999999999 8999999999999974 34788888874 4566778999999765
Q ss_pred HhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHH
Q psy14338 1711 VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1711 ~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~ 1747 (1761)
.|| .|++|+.|++++ +||+|++|||||++|++++
T Consensus 469 ~l~-~~~~P~~i~~v~--~~P~t~~GKi~R~~L~~~~ 502 (503)
T d3cw9a1 469 ELA-DFKRPKRYFILD--QLPKNALNKVLRRQLVQQV 502 (503)
T ss_dssp SSC-GGGSCSEEEECS--CCCBCTTSCBCHHHHHHHH
T ss_pred CCC-CCCCccEEEEEC--CCCcCCCcCccHHHHHHhc
Confidence 588 999999999999 9999999999999999976
|