Psyllid ID: psy14361

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MARVVLRNSEEQDNSSDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE
Secondary Structure (PSIPRED)
ccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHEEEccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHEHEHHcHHccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccHcEEEEEEEHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEHHHcccccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
marvvlrnseeqdnssdyrwiykypLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNqlhkiaptgiasgldvgfsqwGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRlygesnpgtsglVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMqrsdlnmnspidmvyhvqpWMIVSILPFAILFE
Flexible Loop (DISEMBL)
marvvlrnseeqdnssdyrwIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRkrlrlygesnpgtsgLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE
Low Complexity Region (SEG)
MARVVLRNSEEQDNSSDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE
Disordered region (IsUnstruct)
*****************YRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILF*
Disordered Region (DISOPRED)
**R******************YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE
Disordered Region (DISEMBL)
*************NSSDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE
Disordered Region (DISPRO)
**R**LRNS*EQDNSSDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MARVVLRNSEEQDNSSDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	223	2.2.26 [Sep-21-2011]
Q8VCX2	364	Solute carrier family 35	yes	N/A	0.816	0.5	0.418	2e-37
Q9NQQ7	365	Solute carrier family 35	yes	N/A	0.816	0.498	0.413	4e-37
Q8H184	414	Probable sugar phosphate/	yes	N/A	0.578	0.311	0.303	1e-14
Q03697	442	Putative nucleotide-sugar	yes	N/A	0.511	0.257	0.287	3e-07
Q10354	374	Uncharacterized transport	yes	N/A	0.668	0.398	0.276	3e-07

>sp|Q8VCX2|S35C2_MOUSE Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1

 Score =  155 bits (392), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 125/208 (60%), Gaps = 26/208 (12%)

Query: 19  RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
           +W+ K   +PL + + HL   FL + + R + +  +H+ RV+L W + L ++APT +A+ 
Sbjct: 36  KWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHKARVVLSWTDYLRRVAPTALATA 95

Query: 76  LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
           LDVG S W    I VSLYTMTKS++V+FILIFSL+F+LE+  R  L L      G  GL 
Sbjct: 96  LDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLIFKLEEL-RAALVLVVLLIAG--GLF 152

Query: 136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDL 195
           MFTYK+T FN  GF+LVL ASF  G+RWTL Q                     ++Q++DL
Sbjct: 153 MFTYKSTQFNVEGFALVLGASFIGGIRWTLTQ--------------------ILLQKADL 192

Query: 196 NMNSPIDMVYHVQPWMIVSILPFAILFE 223
            + +PID ++H+QP M + + P   +FE
Sbjct: 193 GLQNPIDTMFHLQPLMFLGLFPLFAIFE 220

May play an important role in the cellular response to tissue hypoxia.
Mus musculus (taxid: 10090)

>sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2

 Score =  154 bits (390), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/208 (41%), Positives = 126/208 (60%), Gaps = 26/208 (12%)

Query: 19  RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
           +W+ K   +PL + + HL   FL + + R + +  +H+ RV+L W + L ++APT +A+ 
Sbjct: 36  KWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWADYLRRVAPTALATA 95

Query: 76  LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
           LDVG S W    + VSLYTMTKS++V+FILIFSL+F+LE+  R  L L      G  GL 
Sbjct: 96  LDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEEL-RAALVLVVLLIAG--GLF 152

Query: 136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDL 195
           MFTYK+T FN  GF+LVL ASF  G+RWTL                    TQ ++Q+++L
Sbjct: 153 MFTYKSTQFNVEGFALVLGASFIGGIRWTL--------------------TQMLLQKAEL 192

Query: 196 NMNSPIDMVYHVQPWMIVSILPFAILFE 223
            + +PID ++H+QP M + + P   +FE
Sbjct: 193 GLQNPIDTMFHLQPLMFLGLFPLFAVFE 220

May play an important role in the cellular response to tissue hypoxia.

Homo sapiens (taxid: 9606)

>sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 53  QKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQ 112
           Q  V + W +   ++ PT + + +D+  S   L  I+V+  TM KS + +F+L+F+  F+
Sbjct: 134 QPDVTISWRDYFVRVVPTALGTAMDINLSNESLVFISVTFATMCKSAAPIFLLLFAFAFR 193

Query: 113 LEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQR 172
           LE  S   L+L+G  +  ++G+++   K T F + GF  V+LA+  SG RW + Q ++Q+
Sbjct: 194 LESPS---LKLFGIISVISAGVLLTVAKETEFEFWGFVFVMLAAVMSGFRWCMTQVLLQK 250

Query: 173 SDLNMNSKIIII 184
               + +  I +
Sbjct: 251 ETFGLKNPFIFM 262

Arabidopsis thaliana (taxid: 3702)

>sp|Q03697|YMD8_YEAST Putative nucleotide-sugar transporter YMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMD8 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%)

Query: 60  WHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRK 119
           W   L  + PT +AS  D+G S    + + +++YT+ KS+S+ F+L+F  +F+LEK   K
Sbjct: 77  WSFFLKFLLPTAVASAGDIGLSNVSFQYVPLTIYTIIKSSSIAFVLLFGCIFKLEKFHWK 136

Query: 120 ------------RLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQ 167
                        L ++  S+  +      T    A    G  LVL +S  SGLRW   Q
Sbjct: 137 LALSVIIMFVGVALMVFKPSDSTS------TKNDQALVIFGSFLVLASSCLSGLRWVYTQ 190

Query: 168 FVMQRSDLNMNS 179
            +++ + +  N+
Sbjct: 191 LMLRNNPIQTNT 202

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 3/152 (1%)

Query: 16  SDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
           S+ +  +++PL +  C ++ +   A +    +  Y   K+    W    ++     + +G
Sbjct: 76  SESKMDFQFPLFLSSCQMLVQMGFAKLTILAFPRYQPNKKDNFSWLEYFYRAGICALVTG 135

Query: 76  LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
           LD+G S   L +I +S YTM +S+ ++F+  FS++F++E      L +   +   ++G+V
Sbjct: 136 LDIGLSNASLETITLSFYTMCRSSILIFVFFFSVIFRIEMFDWILLCI---TLVISAGVV 192

Query: 136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQ 167
           +     T F   GF LV+ +S  SGLRW L Q
Sbjct: 193 LMVATETQFVLSGFLLVMASSVLSGLRWALTQ 224

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
321458364	331	hypothetical protein DAPPUDRAFT_113613 [	0.816	0.549	0.485	2e-47
194866116	469	GG14256 [Drosophila erecta] gi|190653547	0.793	0.377	0.475	4e-46
195441452	518	GK20374 [Drosophila willistoni] gi|19416	0.793	0.341	0.465	6e-46
195491449	469	GE20684 [Drosophila yakuba] gi|194179667	0.793	0.377	0.48	8e-46
195587510	469	GD13327 [Drosophila simulans] gi|1941955	0.793	0.377	0.475	1e-45
15292501	469	SD04505p [Drosophila melanogaster]	0.793	0.377	0.475	1e-45
195337182	467	GM14050 [Drosophila sechellia] gi|194128	0.793	0.379	0.475	1e-45
24656864	469	CG14971 [Drosophila melanogaster] gi|729	0.793	0.377	0.475	1e-45
157103545	474	solute carrier family 35 member C2, puta	0.798	0.375	0.462	1e-45
157136113	474	solute carrier family 35 member C2, puta	0.798	0.375	0.462	2e-45

>gi|321458364|gb|EFX69433.1| hypothetical protein DAPPUDRAFT_113613 [Daphnia pulex]

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 138/208 (66%), Gaps = 26/208 (12%)

Query: 19  RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
           +W+ +   YPLSIV+ HLV KF++A  CR V+E +T+ KR +L W     ++AP GIAS 
Sbjct: 49  KWLMRKLHYPLSIVITHLVVKFMLAAACRIVWEYWTNHKRPILAWQPYTVQLAPAGIASA 108

Query: 76  LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
           LD+G S W L  I VSLYTM+KST+++FI+ F+L+F+LEKK    L +    +    GLV
Sbjct: 109 LDIGLSNWSLEFITVSLYTMSKSTAIIFIMGFALLFKLEKKHWTLLVVVVMIS---GGLV 165

Query: 136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDL 195
           MFTY+AT FN  GF +V+ ASF SGLRWTL+Q                     VMQ+S++
Sbjct: 166 MFTYQATQFNLGGFLMVMFASFLSGLRWTLSQ--------------------MVMQKSEM 205

Query: 196 NMNSPIDMVYHVQPWMIVSILPFAILFE 223
            + +PIDM+YH+QPWMIV++LPFA+ FE
Sbjct: 206 GLANPIDMMYHIQPWMIVTLLPFAMAFE 233

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194866116|ref|XP_001971764.1| GG14256 [Drosophila erecta] gi|190653547|gb|EDV50790.1| GG14256 [Drosophila erecta]

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 131/200 (65%), Gaps = 23/200 (11%)

Query: 24  YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83
           +PL+IV  HLV KFL+A   RK+Y +   + RV L W   L K+APTG+AS +D+GFS W
Sbjct: 113 FPLTIVTYHLVVKFLLAAAARKIYRIRVGRSRVQLDWRLALRKMAPTGVASAIDIGFSNW 172

Query: 84  GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143
           GL  + +SLYTMTKS+++VFIL+F++ F LEKKS   + + G      +GL+MFTYK+T 
Sbjct: 173 GLALVPISLYTMTKSSTIVFILLFAIAFGLEKKSWSLVSIVGLIG---TGLLMFTYKSTD 229

Query: 144 FNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDM 203
           FN LGF  +L AS SSGLRW+ AQF                    +MQ+S L +++PIDM
Sbjct: 230 FNALGFFFILFASLSSGLRWSFAQF--------------------IMQKSKLGLHNPIDM 269

Query: 204 VYHVQPWMIVSILPFAILFE 223
           +Y++QPWM+ S++P  I  E
Sbjct: 270 IYYMQPWMVASLVPLVIGIE 289

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195441452|ref|XP_002068523.1| GK20374 [Drosophila willistoni] gi|194164608|gb|EDW79509.1| GK20374 [Drosophila willistoni]

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 132/200 (66%), Gaps = 23/200 (11%)

Query: 24  YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83
           +PL+IV  HLV KF++A + R +Y++   + RV L W   + K+APTG+ASG+D+GFS W
Sbjct: 143 FPLTIVTYHLVLKFMLAALIRHIYQMRVGKTRVQLDWRVAIRKMAPTGVASGIDIGFSNW 202

Query: 84  GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143
           GL  + +SLYTMTKS+++VFIL+F+++  LE+KS   + + G      +GL MFTYK+T 
Sbjct: 203 GLALVPISLYTMTKSSTIVFILLFAIMLGLERKSWSLVFIVGLIG---TGLFMFTYKSTQ 259

Query: 144 FNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDM 203
           FN LGF  +L AS SSGLRW+ AQF                    +MQ+S L +++PIDM
Sbjct: 260 FNALGFFFILFASLSSGLRWSFAQF--------------------IMQKSKLGLHNPIDM 299

Query: 204 VYHVQPWMIVSILPFAILFE 223
           +YH+QPWMI S+LP  +  E
Sbjct: 300 IYHMQPWMIASLLPLVVGIE 319

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195491449|ref|XP_002093566.1| GE20684 [Drosophila yakuba] gi|194179667|gb|EDW93278.1| GE20684 [Drosophila yakuba]

 Score =  189 bits (480), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 96/200 (48%), Positives = 130/200 (65%), Gaps = 23/200 (11%)

Query: 24  YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83
           +PL+IV  HLV KFL+A   RK+Y +   + RV L W   L K+APTG+AS +D+GFS W
Sbjct: 113 FPLTIVTYHLVVKFLLAATARKIYRMRVGRSRVQLDWRLALRKMAPTGVASAIDIGFSNW 172

Query: 84  GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143
           GL  + +SLYTMTKS+++VFIL+F++ F LEKKS   + + G       GL+MFTYK+T 
Sbjct: 173 GLALVPISLYTMTKSSTIVFILLFAIAFGLEKKSWSLVSIVGLIGI---GLLMFTYKSTD 229

Query: 144 FNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDM 203
           FN LGF  +L AS SSGLRW+ AQF                    +MQ+S L +++PIDM
Sbjct: 230 FNALGFFFILFASLSSGLRWSFAQF--------------------IMQKSKLGLHNPIDM 269

Query: 204 VYHVQPWMIVSILPFAILFE 223
           +Y++QPWMI S++P  I  E
Sbjct: 270 IYYMQPWMIASLVPLVIGIE 289

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195587510|ref|XP_002083504.1| GD13327 [Drosophila simulans] gi|194195513|gb|EDX09089.1| GD13327 [Drosophila simulans]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 131/200 (65%), Gaps = 23/200 (11%)

Query: 24  YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83
           +PL+IV  HLV KFL+A   R++Y +   + RV L W   L K+APTG+AS +D+GFS W
Sbjct: 113 FPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWRLALRKMAPTGVASAIDIGFSNW 172

Query: 84  GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143
           GL  + +SLYTMTKS+++VFIL+F++ F LEKKS   + + G      +GL+MFTYK+T 
Sbjct: 173 GLALVPISLYTMTKSSTIVFILLFAIAFGLEKKSWYLVSIVGLIG---TGLLMFTYKSTD 229

Query: 144 FNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDM 203
           FN LGF  +L AS SSGLRW+ AQF                    +MQ+S L +++PIDM
Sbjct: 230 FNALGFFFILFASLSSGLRWSFAQF--------------------IMQKSKLGLHNPIDM 269

Query: 204 VYHVQPWMIVSILPFAILFE 223
           +Y++QPWMI S++P  I  E
Sbjct: 270 IYYMQPWMIASLVPLVIGIE 289

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|15292501|gb|AAK93519.1| SD04505p [Drosophila melanogaster]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 131/200 (65%), Gaps = 23/200 (11%)

Query: 24  YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83
           +PL+IV  HLV KFL+A   R++Y +   + RV L W   L K+APTG+AS +D+GFS W
Sbjct: 113 FPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWRLALRKMAPTGVASAIDIGFSNW 172

Query: 84  GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143
           GL  + +SLYTMTKS+++VFIL+F++ F LEKKS   + + G      +GL+MFTYK+T 
Sbjct: 173 GLALVPISLYTMTKSSTIVFILLFAIAFGLEKKSWYLVSIVGLIG---TGLLMFTYKSTD 229

Query: 144 FNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDM 203
           FN LGF  +L AS SSGLRW+ AQF                    +MQ+S L +++PIDM
Sbjct: 230 FNALGFFFILFASLSSGLRWSFAQF--------------------IMQKSKLGLHNPIDM 269

Query: 204 VYHVQPWMIVSILPFAILFE 223
           +Y++QPWMI S++P  I  E
Sbjct: 270 IYYMQPWMIASLVPLVIGIE 289

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195337182|ref|XP_002035208.1| GM14050 [Drosophila sechellia] gi|194128301|gb|EDW50344.1| GM14050 [Drosophila sechellia]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 131/200 (65%), Gaps = 23/200 (11%)

Query: 24  YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83
           +PL+IV  HLV KFL+A   R++Y +   + RV L W   L K+APTG+AS +D+GFS W
Sbjct: 111 FPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWRLALRKMAPTGVASAIDIGFSNW 170

Query: 84  GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143
           GL  + +SLYTMTKS+++VFIL+F++ F LEKKS   + + G      +GL+MFTYK+T 
Sbjct: 171 GLALVPISLYTMTKSSTIVFILLFAIAFGLEKKSWYLVSIVGLIG---TGLLMFTYKSTD 227

Query: 144 FNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDM 203
           FN LGF  +L AS SSGLRW+ AQF                    +MQ+S L +++PIDM
Sbjct: 228 FNALGFFFILFASLSSGLRWSFAQF--------------------IMQKSKLGLHNPIDM 267

Query: 204 VYHVQPWMIVSILPFAILFE 223
           +Y++QPWMI S++P  I  E
Sbjct: 268 IYYMQPWMIASLVPLVIGIE 287

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24656864|ref|NP_647817.2| CG14971 [Drosophila melanogaster] gi|7292371|gb|AAF47777.1| CG14971 [Drosophila melanogaster] gi|383873396|gb|AFH55504.1| FI19868p1 [Drosophila melanogaster]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 131/200 (65%), Gaps = 23/200 (11%)

Query: 24  YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83
           +PL+IV  HLV KFL+A   R++Y +   + RV L W   L K+APTG+AS +D+GFS W
Sbjct: 113 FPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWRLALRKMAPTGVASAIDIGFSNW 172

Query: 84  GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143
           GL  + +SLYTMTKS+++VFIL+F++ F LEKKS   + + G      +GL+MFTYK+T 
Sbjct: 173 GLALVPISLYTMTKSSTIVFILLFAIAFGLEKKSWYLVSIVGLIG---TGLLMFTYKSTD 229

Query: 144 FNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDM 203
           FN LGF  +L AS SSGLRW+ AQF                    +MQ+S L +++PIDM
Sbjct: 230 FNALGFFFILFASLSSGLRWSFAQF--------------------IMQKSKLGLHNPIDM 269

Query: 204 VYHVQPWMIVSILPFAILFE 223
           +Y++QPWMI S++P  I  E
Sbjct: 270 IYYMQPWMIASLVPLVIGIE 289

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157103545|ref|XP_001648026.1| solute carrier family 35 member C2, putative [Aedes aegypti] gi|108869395|gb|EAT33620.1| AAEL014094-PA [Aedes aegypti]

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 93/201 (46%), Positives = 133/201 (66%), Gaps = 23/201 (11%)

Query: 23  KYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQ 82
           K+PLS+V+ HL  K +++ + R +    T +KR+LL W   + KI PTG+ASG+D+GFS 
Sbjct: 95  KFPLSVVLYHLCIKLVMSAVVRAILRCATKKKRILLDWRTSVRKILPTGLASGIDIGFSN 154

Query: 83  WGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT 142
           WGL  + +SLYTMTKST++VFILIF+++ +LEKKS     L       + GL +FTYK+T
Sbjct: 155 WGLELVQISLYTMTKSTTIVFILIFAILLKLEKKS---WSLAAIVVMISGGLFLFTYKST 211

Query: 143 AFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPID 202
            F+ LGFS +L AS SSG+RW+ AQ                     +MQ+S L +++PID
Sbjct: 212 HFDALGFSFLLFASLSSGIRWSFAQ--------------------LIMQKSKLGLHNPID 251

Query: 203 MVYHVQPWMIVSILPFAILFE 223
           M++H+QPWMI+++LPF I FE
Sbjct: 252 MIFHMQPWMILAVLPFTIGFE 272

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157136113|ref|XP_001663659.1| solute carrier family 35 member C2, putative [Aedes aegypti] gi|108870042|gb|EAT34267.1| AAEL013468-PA [Aedes aegypti]

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/201 (46%), Positives = 133/201 (66%), Gaps = 23/201 (11%)

Query: 23  KYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQ 82
           K+PLS+V+ HL  K +++ + R +    T +KR+LL W   + KI PTG+ASG+D+GFS 
Sbjct: 95  KFPLSVVLYHLCIKLVMSAVVRAILRCATKKKRILLDWRTSVRKILPTGLASGIDIGFSN 154

Query: 83  WGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT 142
           WGL  + +SLYTMTKST++VFILIF+++ +LEKKS     L       + GL +FTYK+T
Sbjct: 155 WGLELVQISLYTMTKSTTIVFILIFAILLKLEKKS---WSLAAIVVMISGGLFLFTYKST 211

Query: 143 AFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPID 202
            F+ LGFS +L AS SSG+RW+ AQ                     +MQ+S L +++PID
Sbjct: 212 HFDALGFSFLLFASLSSGIRWSFAQ--------------------LIMQKSKLGLHNPID 251

Query: 203 MVYHVQPWMIVSILPFAILFE 223
           M++H+QPWMI+++LPF I FE
Sbjct: 252 MIFHMQPWMILAVLPFTIGFE 272

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
MGI|MGI:2385166	364	Slc35c2 "solute carrier family	0.717	0.439	0.469	2.8e-42
UNIPROTKB|E2RPV5	368	SLC35C2 "Uncharacterized prote	0.717	0.434	0.463	2e-41
UNIPROTKB|I3LL24	364	SLC35C2 "Uncharacterized prote	0.717	0.439	0.463	2.5e-41
UNIPROTKB|F5H4T9	394	SLC35C2 "Solute carrier family	0.717	0.406	0.457	3.2e-41
UNIPROTKB|Q9NQQ7	365	SLC35C2 "Solute carrier family	0.717	0.438	0.457	3.2e-41
FB|FBgn0035449	469	CG14971 [Drosophila melanogast	0.708	0.336	0.527	5.3e-40
WB|WBGene00021637	410	Y47G6A.7 [Caenorhabditis elega	0.852	0.463	0.379	1.6e-29
ZFIN|ZDB-GENE-030131-2202	1897	slc35c2 "solute carrier family	0.717	0.084	0.427	3.8e-29
UNIPROTKB|F1P1H6	357	SLC35C2 "Uncharacterized prote	0.726	0.453	0.414	7.3e-27
UNIPROTKB|F1NNT3	321	SLC35C2 "Uncharacterized prote	0.726	0.504	0.402	1.1e-25

MGI|MGI:2385166 Slc35c2 "solute carrier family 35, member C2" [Mus musculus (taxid:10090)]

 Score = 364 (133.2 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
 Identities = 78/166 (46%), Positives = 110/166 (66%)

Query:    19 RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
             +W+ K   +PL + + HL   FL + + R + +  +H+ RV+L W + L ++APT +A+ 
Sbjct:    36 KWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHKARVVLSWTDYLRRVAPTALATA 95

Query:    76 LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
             LDVG S W    I VSLYTMTKS++V+FILIFSL+F+LE+  R  L L      G  GL 
Sbjct:    96 LDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLIFKLEEL-RAALVLVVLLIAG--GLF 152

Query:   136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKI 181
             MFTYK+T FN  GF+LVL ASF  G+RWTL Q ++Q++DL + + I
Sbjct:   153 MFTYKSTQFNVEGFALVLGASFIGGIRWTLTQILLQKADLGLQNPI 198

GO:0003674 "molecular_function" evidence=ND

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISO

GO:0005801 "cis-Golgi network" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0036065 "fucosylation" evidence=IDA

GO:0036066 "protein O-linked fucosylation" evidence=IMP;IDA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IDA

UNIPROTKB|E2RPV5 SLC35C2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 360 (131.8 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
 Identities = 77/166 (46%), Positives = 110/166 (66%)

Query:    19 RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
             +W+ K   +PL + + HL   FL + + R + +  +H+ RV+L W + L ++APT +A+ 
Sbjct:    36 KWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWTDYLRRVAPTALATA 95

Query:    76 LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
             LDVG S W    I VSLYTMTKS++V+FILIFSL+F+LE+  R  L L      G  GL 
Sbjct:    96 LDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLIFKLEEL-RAALVLVVLLIAG--GLF 152

Query:   136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKI 181
             MFTYK+T FN  GF+LVL ASF  G+RWTL Q ++Q+++L + + I
Sbjct:   153 MFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPI 198

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|I3LL24 SLC35C2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 360 (131.8 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
 Identities = 77/166 (46%), Positives = 110/166 (66%)

Query:    19 RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
             +W+ K   +PL + + HL   FL + + R + +  +H+ RV+L W + L ++APT +A+ 
Sbjct:    36 KWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWTDYLRRVAPTALATA 95

Query:    76 LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
             LDVG S W    I VSLYTMTKS++V+FILIFSL+F+LE+  R  L L      G  GL 
Sbjct:    96 LDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLIFKLEEL-RAALVLVVLLIAG--GLF 152

Query:   136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKI 181
             MFTYK+T FN  GF+LVL ASF  G+RWTL Q ++Q+++L + + I
Sbjct:   153 MFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPI 198

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F5H4T9 SLC35C2 "Solute carrier family 35 member C2" [Homo sapiens (taxid:9606)]

 Score = 359 (131.4 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
 Identities = 76/166 (45%), Positives = 110/166 (66%)

Query:    19 RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
             +W+ K   +PL + + HL   FL + + R + +  +H+ RV+L W + L ++APT +A+ 
Sbjct:    65 KWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWADYLRRVAPTALATA 124

Query:    76 LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
             LDVG S W    + VSLYTMTKS++V+FILIFSL+F+LE+  R  L L      G  GL 
Sbjct:   125 LDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEEL-RAALVLVVLLIAG--GLF 181

Query:   136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKI 181
             MFTYK+T FN  GF+LVL ASF  G+RWTL Q ++Q+++L + + I
Sbjct:   182 MFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPI 227

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NQQ7 SLC35C2 "Solute carrier family 35 member C2" [Homo sapiens (taxid:9606)]

 Score = 359 (131.4 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
 Identities = 76/166 (45%), Positives = 110/166 (66%)

Query:    19 RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
             +W+ K   +PL + + HL   FL + + R + +  +H+ RV+L W + L ++APT +A+ 
Sbjct:    36 KWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWADYLRRVAPTALATA 95

Query:    76 LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
             LDVG S W    + VSLYTMTKS++V+FILIFSL+F+LE+  R  L L      G  GL 
Sbjct:    96 LDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEEL-RAALVLVVLLIAG--GLF 152

Query:   136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKI 181
             MFTYK+T FN  GF+LVL ASF  G+RWTL Q ++Q+++L + + I
Sbjct:   153 MFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPI 198

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IDA

GO:0005801 "cis-Golgi network" evidence=IDA

FB|FBgn0035449 CG14971 [Drosophila melanogaster (taxid:7227)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 85/161 (52%), Positives = 116/161 (72%)

Query:    24 YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83
             +PL+IV  HLV KFL+A   R++Y +   + RV L W   L K+APTG+AS +D+GFS W
Sbjct:   113 FPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWRLALRKMAPTGVASAIDIGFSNW 172

Query:    84 GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143
             GL  + +SLYTMTKS+++VFIL+F++ F LEKKS   + + G    GT GL+MFTYK+T 
Sbjct:   173 GLALVPISLYTMTKSSTIVFILLFAIAFGLEKKSWYLVSIVGLI--GT-GLLMFTYKSTD 229

Query:   144 FNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIII 184
             FN LGF  +L AS SSGLRW+ AQF+MQ+S L +++ I +I
Sbjct:   230 FNALGFFFILFASLSSGLRWSFAQFIMQKSKLGLHNPIDMI 270

GO:0000138 "Golgi trans cisterna" evidence=IDA

WB|WBGene00021637 Y47G6A.7 [Caenorhabditis elegans (taxid:6239)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 79/208 (37%), Positives = 123/208 (59%)

Query:    22 YKYPLSIVVCHLVFKFLVALICRKVYE-LYTHQKRVLLCWHNQLHKIAPTGIASGLDVGF 80
             YK PL +V  H V K+L A+  R +YE L T + RV   + +QL  +AP GI + +D+G 
Sbjct:   105 YKLPLLVVSGHYVLKYLFAITIRFIYECLRTRRTRV--SFRDQLRWLAPIGICASMDIGL 162

Query:    81 SQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYK 140
             S W L  + VSLYTM KS+S++FI+ FSL+ +LE   R R  L  E+    +GL +FT+K
Sbjct:   163 SNWALEYVTVSLYTMAKSSSILFIVAFSLLLRLE---RWRNSLGFETGLIAAGLFLFTWK 219

Query:   141 ATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSD------LNMNSKI-----IIIITQ-F 188
             ++  +  G  LV LA+  +G+RWT++Q VMQR D      L+M + +     I II   +
Sbjct:   220 SSQLDLTGLMLVELAAACTGIRWTVSQMVMQRDDSAVRHPLDMVAHVQPWMMIPIIPMIW 279

Query:   189 VMQRSDLNMNSPIDMVYHVQPWMIVSIL 216
             + + +++N NS      H  PW+++ ++
Sbjct:   280 LFEGAEINWNSVFSFKGHYDPWLVMGLI 307

GO:0008270 "zinc ion binding" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-2202 slc35c2 "solute carrier family 35, member C2" [Danio rerio (taxid:7955)]

 Score = 339 (124.4 bits), Expect = 3.8e-29, P = 3.8e-29
 Identities = 71/166 (42%), Positives = 106/166 (63%)

Query:    19 RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
             +W+ K   +PL + + HL   F ++ + R   + +T + RV L W   L K+APT +A+ 
Sbjct:    33 KWLMKDFHFPLFMTLVHLTIIFCLSTLTRSAMQCWTGKPRVTLPWKVYLSKVAPTALATT 92

Query:    76 LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
             LD+G S W    I +SLYTMTKS++V+FIL FSL+F+LE+ +   + +    +   SGL 
Sbjct:    93 LDIGLSNWSFLFITISLYTMTKSSAVLFILFFSLLFKLEEPNPFLILVVVLIS---SGLF 149

Query:   136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKI 181
             MFT K+T FN  GF +VLLASF  G+RWTL Q +MQ+++L + + I
Sbjct:   150 MFTLKSTQFNLEGFIMVLLASFIGGIRWTLTQLLMQKAELGLQNPI 195

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1P1H6 SLC35C2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 70/169 (41%), Positives = 102/169 (60%)

Query:    19 RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
             +W+ K   +PL   + HL+  F ++ + R   E    Q+  LL      H+ A   +++ 
Sbjct:    33 KWLMKSFPFPLLATLLHLLLIFALSALSR-AKEFLQPQQHPLLTSIECNHQAASAALSTS 91

Query:    76 LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
             LD+G S W    + VSLYTMTKS++++FIL+FSL+F+LE+  R  L L      G  GL 
Sbjct:    92 LDIGLSNWSFLYVTVSLYTMTKSSAILFILLFSLLFKLEEM-RVALVLVVVLIAG--GLF 148

Query:   136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIII 184
             MFTYK+T FN  GF LVL ASF  G+RWTL Q +MQ+++L + + I I+
Sbjct:   149 MFTYKSTQFNTQGFMLVLCASFLGGVRWTLTQILMQKAELGLQNPIDIM 197

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NNT3 SLC35C2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 68/169 (40%), Positives = 101/169 (59%)

Query:    19 RWIYK---YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASG 75
             +W+ K   +PL   + HL+  F ++ + R            +L   + L + AP  +++ 
Sbjct:    35 KWLMKSFPFPLLATLLHLLLIFALSALSRAKLXGGGRPADAVL-GPSGLRRTAPAALSTS 93

Query:    76 LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLV 135
             LD+G S W    + VSLYTMTKS++++FIL+FSL+F+LE+  R  L L      G  GL 
Sbjct:    94 LDIGLSNWSFLYVTVSLYTMTKSSAILFILLFSLLFKLEEM-RVALVLVVVLIAG--GLF 150

Query:   136 MFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIII 184
             MFTYK+T FN  GF LVL ASF  G+RWTL Q +MQ+++L + + I I+
Sbjct:   151 MFTYKSTQFNTQGFMLVLCASFLGGVRWTLTQILMQKAELGLQNPIDIM 199

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	223
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	0.003

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 20/76 (26%)

Query: 148 GFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHV 207
           GF L L AS    LR  L+Q ++++                        +N  ++++Y++
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKK-------------------GTKLN-VLELLYYL 40

Query: 208 QPWMIVSILPFAILFE 223
            P   + +LP  +  E
Sbjct: 41  SPVAFIVLLPGLLFSE 56

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
KOG1443|consensus	349		100.0
KOG1441|consensus	316		100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.93
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.85
KOG1581|consensus	327		99.8
KOG1580|consensus	337		99.71
KOG1442|consensus	347		99.66
KOG1444|consensus	314		99.49
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.49
KOG1582|consensus	367		99.35
KOG3912|consensus	372		99.28
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.22
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.1
PLN00411	358	nodulin MtN21 family protein; Provisional	98.87
PRK11272	292	putative DMT superfamily transporter inner membran	98.79
KOG2765|consensus	416		98.75
KOG1583|consensus	330		98.7
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.65
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.63
PRK15430	296	putative chloramphenical resistance permease RarD;	98.63
PRK11689	295	aromatic amino acid exporter; Provisional	98.59
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.47
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.44
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.37
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.36
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.3
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.28
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.28
KOG2234|consensus	345		98.17
KOG4314|consensus	290		97.99
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.61
KOG2766|consensus	336		97.52
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.44
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.34
COG2510	140	Predicted membrane protein [Function unknown]	97.29
PLN00411	358	nodulin MtN21 family protein; Provisional	96.96
KOG4510|consensus	346		96.84
PRK11272	292	putative DMT superfamily transporter inner membran	96.74
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.65
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	96.25
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.88
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	95.73
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.45
PRK10532	293	threonine and homoserine efflux system; Provisiona	95.26
PRK11689	295	aromatic amino acid exporter; Provisional	94.91
COG2962	293	RarD Predicted permeases [General function predict	94.89
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	94.83
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	94.57
PRK09541	110	emrE multidrug efflux protein; Reviewed	94.33
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	94.27
PRK11431	105	multidrug efflux system protein; Provisional	93.91
COG2076	106	EmrE Membrane transporters of cations and cationic	93.63
PRK15430	296	putative chloramphenical resistance permease RarD;	93.61
PRK10650	109	multidrug efflux system protein MdtI; Provisional	93.35
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	93.16
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	92.51
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.06
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	91.53
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	91.49
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	91.35
COG0697	292	RhaT Permeases of the drug/metabolite transporter	87.63
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	82.91
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	82.71
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	81.15

>KOG1443|consensus

Probab=100.00  E-value=4.9e-35  Score=250.78  Aligned_cols=185  Identities=43%  Similarity=0.788  Sum_probs=174.2

Q ss_pred             CCCccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHH
Q psy14361         16 SDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTM   95 (223)
Q Consensus        16 ~~~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm   95 (223)
                      +..+++|+||++++.+|+++.++++...++..++..++++.+.+|+++.|++.|+|++.++|++++|+|+.|+++|+|+|
T Consensus        36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM  115 (349)
T KOG1443|consen   36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTM  115 (349)
T ss_pred             hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeee
Confidence            44567799999999999999999999999888777666678899999999999999999999999999999999999999


Q ss_pred             HhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy14361         96 TKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDL  175 (223)
Q Consensus        96 ~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~  175 (223)
                      .|++.++|+++++.+|+.||++   |...+.+++|.+|+.++++++.+|+..|+.++++|++++|+||+++|.++++.  
T Consensus       116 ~KSSsi~FIllFs~if~lEk~~---w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~--  190 (349)
T KOG1443|consen  116 TKSSSILFILLFSLIFKLEKFR---WALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQ--  190 (349)
T ss_pred             ccccHHHHHHHHHHHHHhHHHH---HHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcC--
Confidence            9999999999999999999999   99999999999999999999999999999999999999999999999999997  


Q ss_pred             ccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361        176 NMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE  223 (223)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E  223 (223)
                                        +....||++++++++|++.+.|+|..+.+|
T Consensus       191 ------------------~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fE  220 (349)
T KOG1443|consen  191 ------------------PSAKRNPIDTIFHLQPWMSIGLLPLSLLFE  220 (349)
T ss_pred             ------------------ccccCCCeeeHHHhhhHHHHHHHHHHHHHc
Confidence                              222349999999999999999999999998

>KOG1441|consensus

Probab=100.00  E-value=3.3e-32  Score=238.78  Aligned_cols=176  Identities=19%  Similarity=0.335  Sum_probs=159.1

Q ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh
Q psy14361         20 WIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST   99 (223)
Q Consensus        20 ~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~   99 (223)
                      ++|+||+++|.+|.+++++...+.+. .|..   +.++.+.+.+++.++|+|+.++++++++|.|+.|+||||+|++|++
T Consensus        43 ~~f~~p~~lt~~~~~~~~l~~~v~~~-l~~~---~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~  118 (316)
T KOG1441|consen   43 YGFPFPITLTMLHLFCGALALLVIKV-LKLV---PPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKAL  118 (316)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHH-hcCC---CCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhh
Confidence            78999999999999999888777653 4543   3444445567899999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Q psy14361        100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNS  179 (223)
Q Consensus       100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~  179 (223)
                      +|++++++++++.+|+++   +.+++++.+++.||++++++|.+||+.|++.+++|.+.+++|+++.+++++++      
T Consensus       119 ~P~~tvl~~~~~~~~~~s---~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~------  189 (316)
T KOG1441|consen  119 MPPFTVLLSVLLLGKTYS---SMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSK------  189 (316)
T ss_pred             cchhHHHHHHHHhCCCCc---ceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc------
Confidence            999999999999999999   99999999999999999999999999999999999999999999999999766      


Q ss_pred             hHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHH-HHHHhcC
Q psy14361        180 KIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSIL-PFAILFE  223 (223)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll-~~~~~~E  223 (223)
                                    +.+. |++++++|++|++++.++ |.+...|
T Consensus       190 --------------~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~  219 (316)
T KOG1441|consen  190 --------------GESL-NSMNLLYYTAPISLIFLLIPFLDYVE  219 (316)
T ss_pred             --------------cccc-CchHHHHHhhhHHHHHHhcchHhhhc
Confidence                          3355 999999999999999999 8776654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.93  E-value=6.5e-25  Score=196.63  Aligned_cols=178  Identities=21%  Similarity=0.268  Sum_probs=154.1

Q ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccc-hHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh
Q psy14361         21 IYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLC-WHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST   99 (223)
Q Consensus        21 ~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~   99 (223)
                      .||||++++++|++++++++.+++. .+..   ++++.+ ++.+++.++|+|+++......+|.|++++++|++|++|++
T Consensus        74 ~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~---~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~  149 (350)
T PTZ00343         74 MLPLPWTISSLQLFVGWLFALLYWA-TGFR---KIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAA  149 (350)
T ss_pred             hCChhHHHHHHHHHHHHHHHHHHHH-hCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHh
Confidence            3899999999999999998776643 2321   223343 5557899999999988888889999999999999999999


Q ss_pred             hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Q psy14361        100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNS  179 (223)
Q Consensus       100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~  179 (223)
                      +|++++++++++++||++   ++++++++++++||++++.+|.++++.|++++++|+++.++|+++.|+++++++..   
T Consensus       150 ~Pvft~lls~~~l~ek~s---~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~---  223 (350)
T PTZ00343        150 EPVFTALLSILFLKQFLN---LYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEI---  223 (350)
T ss_pred             hHHHHHHHHHHHhCCCcc---HHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---
Confidence            999999999999999999   99999999999999999999999999999999999999999999999998776211   


Q ss_pred             hHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361        180 KIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE  223 (223)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E  223 (223)
                                    ..+. ++.+++++++++++++++|+.++.|
T Consensus       224 --------------~~~~-~~~~~~~~~~~~~~l~~lp~~~~~e  252 (350)
T PTZ00343        224 --------------GENL-TASNIYMLLTLIASLISLPLVLFFE  252 (350)
T ss_pred             --------------cccC-CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                          1134 8889999999999999999988665

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.88  E-value=6.1e-22  Score=173.40  Aligned_cols=172  Identities=19%  Similarity=0.265  Sum_probs=149.0

Q ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhh
Q psy14361         21 IYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTS  100 (223)
Q Consensus        21 ~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~  100 (223)
                      +|++|++++++|++++.+.+.+.++. +.   +++++.+++ .++.++|+|+++++++.++|.|++|+|++++|++|+++
T Consensus        27 ~~~~P~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~  101 (302)
T TIGR00817        27 VFPYPYFKTLISLAVGSLYCLLSWSS-GL---PKRLKISSA-LLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAME  101 (302)
T ss_pred             hCChhHHHHHHHHHHHHHHHHHHHHh-CC---CCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcc
Confidence            38999999999999998887766321 11   123445665 47889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchh
Q psy14361        101 VVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSK  180 (223)
Q Consensus       101 pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~~  180 (223)
                      |++++++++++++||++   ++.+++++++++|+.+.+.+|.++++.|.+++++|.++.+++.+..+++.+++       
T Consensus       102 Pv~~~ll~~~~~~e~~~---~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~-------  171 (302)
T TIGR00817       102 PFFSVVLSAFFLGQEFP---STLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIK-------  171 (302)
T ss_pred             hHHHHHHHHHHhCCCCc---HHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccC-------
Confidence            99999999999999999   88999999999999988777788889999999999999999999998876532       


Q ss_pred             HHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361        181 IIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE  223 (223)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E  223 (223)
                                     +. ||.++..|+.+.+++.++|++...|
T Consensus       172 ---------------~~-~~~~~~~~~~~~~~~~l~p~~~~~~  198 (302)
T TIGR00817       172 ---------------SL-DKTNLYAYISIMSLFLLSPPAFITE  198 (302)
T ss_pred             ---------------CC-CcccHHHHHHHHHHHHHHHHHHHHc
Confidence                           23 8999999999999999999987654

specificities overlap.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.85  E-value=1.9e-20  Score=164.43  Aligned_cols=166  Identities=19%  Similarity=0.253  Sum_probs=142.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHH
Q psy14361         23 KYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVV  102 (223)
Q Consensus        23 ~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi  102 (223)
                      +||++++++|+++..+.+.......+   .+++++.+    +++.++.++++.++..++|.|++|+|+|++++.|+++|+
T Consensus        30 ~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i  102 (303)
T PF08449_consen   30 PFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIP----LKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPI  102 (303)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcCh----HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHH
Confidence            89999999999999999888765433   11223333    455678999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcc----c------cHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy14361        103 FILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA----F------NWLGFSLVLLASFSSGLRWTLAQFVMQR  172 (223)
Q Consensus       103 ~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~----~------~~~G~~l~l~s~~~~al~~v~~q~ll~~  172 (223)
                      +++++++++++||++   ++++++++++++|+++++.+|.+    .      ...|+++.++|.+++|++.+++|++.++
T Consensus       103 ~vmi~~~l~~~k~y~---~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~  179 (303)
T PF08449_consen  103 PVMILGVLILGKRYS---RRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKK  179 (303)
T ss_pred             HHHHHHHHhcCcccc---HHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999   99999999999999999887631    1      1349999999999999999999999887


Q ss_pred             cccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHh
Q psy14361        173 SDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAIL  221 (223)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~  221 (223)
                      +                      +. ++.++++|.+.++.+.+++....
T Consensus       180 ~----------------------~~-~~~~~mfy~n~~~~~~~~~~~~~  205 (303)
T PF08449_consen  180 Y----------------------GK-SPWELMFYTNLFSLPFLLILLFL  205 (303)
T ss_pred             h----------------------CC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence            6                      23 88999999999999988877765

; GO: 0055085 transmembrane transport

>KOG1581|consensus

Probab=99.80  E-value=2e-18  Score=148.72  Aligned_cols=182  Identities=14%  Similarity=0.123  Sum_probs=157.8

Q ss_pred             eeeeccccccCCCCCccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhh
Q psy14361          4 VVLRNSEEQDNSSDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW   83 (223)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~   83 (223)
                      .|+|.+....+++++.++|++|.++..+|-+++.++++.+.+..+.   +.+.+-+|.    +..-+|+....+-.++.-
T Consensus        30 gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~---~~~~~apl~----~y~~is~tn~~s~~~~ye  102 (327)
T KOG1581|consen   30 GVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKK---ELSGVAPLY----KYSLISFTNTLSSWCGYE  102 (327)
T ss_pred             HHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccc---cCCCCCchh----HHhHHHHHhhcchHHHHH
Confidence            4789999999999999999999999999999999999887765332   223333443    334488999999999999


Q ss_pred             hhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc---------cccHHHHHHHHH
Q psy14361         84 GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT---------AFNWLGFSLVLL  154 (223)
Q Consensus        84 sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~---------~~~~~G~~l~l~  154 (223)
                      ||+|+|.+.+.++|+|+.++|++++.+.+++|++   +++|++..+|.+||.+++..+.         ..++.|+.+...
T Consensus       103 aLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~---~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~  179 (327)
T KOG1581|consen  103 ALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYS---SFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFG  179 (327)
T ss_pred             HHHhccchHHHHHHHhhhhHHHHHHHHHhcCccC---cHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHH
Confidence            9999999999999999999999999999999999   9999999999999999987642         256899999999


Q ss_pred             HHHHHHHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHH
Q psy14361        155 ASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPF  218 (223)
Q Consensus       155 s~~~~al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~  218 (223)
                      +.++||+.+..|++++++.                      ++ ++.++++|++.++++.....
T Consensus       180 ~L~fDgfTn~tQd~lf~~~----------------------k~-s~~~mM~~vNLf~~i~~~~~  220 (327)
T KOG1581|consen  180 YLLFDGFTNATQDSLFKKY----------------------KV-SSLHMMFGVNLFSAILNGTY  220 (327)
T ss_pred             HHHHHhhHHhHHHHHhccC----------------------Cc-cHhHHHHHHHHHHHHHHHHh
Confidence            9999999999999999865                      45 99999999999998876543

>KOG1580|consensus

Probab=99.71  E-value=3.4e-18  Score=142.90  Aligned_cols=169  Identities=14%  Similarity=0.138  Sum_probs=140.2

Q ss_pred             CCccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHH
Q psy14361         17 DYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMT   96 (223)
Q Consensus        17 ~~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~   96 (223)
                      +..+.|.|...+.++|+.++.+++-++..+.+      +.+.+.. ..+....+++.+.+.++-+|.+++|+|++...+.
T Consensus        45 ~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~------~~~~D~t-~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlg  117 (337)
T KOG1580|consen   45 ESIEKFTFALALVFFQCTANTVFAKVLFLIRK------KTEIDNT-PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLG  117 (337)
T ss_pred             cchheehHHHHHHHHHHHHHHHHHHhheeecc------cccccCC-cchHHHHHHHHHHHHHHhccchhcccCCcHHHhc
Confidence            45688999999999999999999987765422      1222221 1233355899999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc-------cccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361         97 KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT-------AFNWLGFSLVLLASFSSGLRWTLAQFV  169 (223)
Q Consensus        97 Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~-------~~~~~G~~l~l~s~~~~al~~v~~q~l  169 (223)
                      |++.|++++++++++.+|+++   |++|+++++|++||+++.++|.       +...+|-++.++|..++|+..+.++++
T Consensus       118 KScKPIPVMilGVl~~~KsY~---w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdri  194 (337)
T KOG1580|consen  118 KSCKPIPVMILGVLFAHKSYH---WRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRI  194 (337)
T ss_pred             ccCCCcceeeeehhhhccccc---HHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHH
Confidence            999999999999999999999   9999999999999999999863       234688999999999999999999988


Q ss_pred             hcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHH
Q psy14361        170 MQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPF  218 (223)
Q Consensus       170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~  218 (223)
                      -..+                      .. +.-++++|++.+|.+.|..-
T Consensus       195 ra~y----------------------q~-~g~~MM~~~NlwStL~Lg~g  220 (337)
T KOG1580|consen  195 RASY----------------------QR-TGTSMMFYTNLWSTLYLGAG  220 (337)
T ss_pred             HHhh----------------------cc-CchhhHHHHHHHHHHHhhhh
Confidence            4443                      22 56689999999998877543

>KOG1442|consensus

Probab=99.66  E-value=3.2e-16  Score=133.49  Aligned_cols=179  Identities=18%  Similarity=0.226  Sum_probs=146.4

Q ss_pred             CCCccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccc---cccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHH
Q psy14361         16 SDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQ---KRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSL   92 (223)
Q Consensus        16 ~~~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~   92 (223)
                      ++.....+-|+++|+.|++++..+|.++.+..+..+..   +..+++.+ ..++++|+++.+.+.+.+.|++|+|++|+|
T Consensus        52 ss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~-t~r~vlplsvVfi~mI~fnnlcL~yVgVaF  130 (347)
T KOG1442|consen   52 SSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLA-TARQVLPLSVVFILMISFNNLCLKYVGVAF  130 (347)
T ss_pred             hchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHH-HHHhhcchhheeeeehhccceehhhcceEE
Confidence            34445678899999999999999999887764433221   23345554 589999999999999999999999999999


Q ss_pred             HHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC---ccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361         93 YTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA---TAFNWLGFSLVLLASFSSGLRWTLAQFV  169 (223)
Q Consensus        93 ~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e---~~~~~~G~~l~l~s~~~~al~~v~~q~l  169 (223)
                      |++-|+.+.+|+++++++++|+|.+   .....++++|++|..+-...|   ..++|.|.++.+.|++..|+..+.+++.
T Consensus       131 YyvgRsLttvFtVlLtyvllkqkTs---~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~  207 (347)
T KOG1442|consen  131 YYVGRSLTTVFTVLLTYVLLKQKTS---FFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKV  207 (347)
T ss_pred             EEeccchhhhHHHHhHHhhcccccc---cccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhhee
Confidence            9999999999999999999999999   888899999999999887777   5789999999999999999988888865


Q ss_pred             hcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHh
Q psy14361        170 MQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAIL  221 (223)
Q Consensus       170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~  221 (223)
                      +..-++                       --..+-+|.+-.+.+.-+|..++
T Consensus       208 l~~v~~-----------------------~iw~lt~ynnv~a~lLflpll~l  236 (347)
T KOG1442|consen  208 LPPVGD-----------------------CIWRLTAYNNVNALLLFLPLLIL  236 (347)
T ss_pred             cccccC-----------------------eehhhHHHHHHHHHHHHHHHHHH
Confidence            544321                       22566777777777777776544

>KOG1444|consensus

Probab=99.49  E-value=9.6e-14  Score=120.80  Aligned_cols=170  Identities=15%  Similarity=0.236  Sum_probs=141.2

Q ss_pred             cCchHHHHH--HHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh
Q psy14361         22 YKYPLSIVV--CHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST   99 (223)
Q Consensus        22 F~~P~~lt~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~   99 (223)
                      ++||..++.  .|++++.+..+++.+ .|..+   .++++|+ ..|+.+|+++.+.+++..+--+++|++|+.+.+.|..
T Consensus        38 y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~---~~~l~~~-~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~  112 (314)
T KOG1444|consen   38 YNFPMGLLLMLLQSLASVLVVLVLKR-LGLVN---FRPLDLR-TAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNL  112 (314)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHH-hceee---cCCcChH-HHHHHccHHHHHHHHHHHccccccccCchHHHHHhhc
Confidence            677777666  999999888877654 35543   4567776 4788999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Q psy14361        100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNS  179 (223)
Q Consensus       100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~  179 (223)
                      +|+.+++....+++++++   +..+.++..+.+|-.....+|.+++..|+..++..++..+...+..++-++..+.    
T Consensus       113 tii~~ai~E~lf~~~~~~---~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l----  185 (314)
T KOG1444|consen  113 TIILTAIGEVLFFGKRPS---NKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANL----  185 (314)
T ss_pred             hHHHHHHhHHhhcCcCch---hhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhccccc----
Confidence            999999999999999999   9999999999999999989999999999999999999999988888777666522    


Q ss_pred             hHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhc
Q psy14361        180 KIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILF  222 (223)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~  222 (223)
                                         +..++++|=+-.+...+...+++.
T Consensus       186 -------------------~~~~lv~yNnl~~L~~l~~~~~~~  209 (314)
T KOG1444|consen  186 -------------------NKFGLVFYNNLLSLPPLLILSFIT  209 (314)
T ss_pred             -------------------cceeEEeehhHHHHHHHHHHHHHh
Confidence                               445666666666666655555443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.49  E-value=6.4e-13  Score=118.22  Aligned_cols=172  Identities=13%  Similarity=0.065  Sum_probs=132.1

Q ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhh
Q psy14361         21 IYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTS  100 (223)
Q Consensus        21 ~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~  100 (223)
                      ++..|.+++.+..+.-.++-.... ..|..++ +..+..++++++.++ +|++-.....+.+.|++|.+++-.|++.++.
T Consensus        39 ~~~~P~~Qs~~~Y~~l~~vy~~~~-~~r~~~~-~~~~~~~~~~w~y~l-la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~  115 (334)
T PF06027_consen   39 GVNIPTFQSFFNYVLLALVYTPIL-LYRRGFK-KWLKVLKRPWWKYFL-LALLDVEANYLVVLAYQYTSVTSVQLLDCTS  115 (334)
T ss_pred             CccCcHHHHHHHHHHHHHHHhhhh-hhccccc-cchhhcchhHHHHHH-HHHHHHHHHHHHHHHhhcccHhHHHhhhhhh
Confidence            788999999888766544322222 1222111 111222334555555 7899889999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc---------cccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy14361        101 VVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT---------AFNWLGFSLVLLASFSSGLRWTLAQFVMQ  171 (223)
Q Consensus       101 pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~---------~~~~~G~~l~l~s~~~~al~~v~~q~ll~  171 (223)
                      .+++++++++++++|++   +..++++++.++|+++....|.         +-...|-+++++|+++.|++++++|++.+
T Consensus       116 i~~~~~LS~~fL~~ry~---~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~  192 (334)
T PF06027_consen  116 IPFVMILSFIFLKRRYS---WFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVK  192 (334)
T ss_pred             hHHHHHHHHHHHHhhhh---HHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999   9999999999999987766552         13489999999999999999999999987


Q ss_pred             ccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361        172 RSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE  223 (223)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E  223 (223)
                      +.                         |..+.+..+.-..++...+...++|
T Consensus       193 ~~-------------------------~~~~~lg~~Glfg~ii~~iq~~ile  219 (334)
T PF06027_consen  193 KA-------------------------PRVEFLGMLGLFGFIISGIQLAILE  219 (334)
T ss_pred             cC-------------------------CHHHHHHHHHHHHHHHHHHHHHhee
Confidence            65                         5567777777777777776666655

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1582|consensus

Probab=99.35  E-value=1.6e-13  Score=117.13  Aligned_cols=144  Identities=15%  Similarity=0.189  Sum_probs=124.2

Q ss_pred             ccccC-chHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHh
Q psy14361         19 RWIYK-YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTK   97 (223)
Q Consensus        19 ~~~F~-~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~K   97 (223)
                      .++|+ |-|.+|.+|+++-..+.++-++.+   + .++..+|||.|.    .++....++++++|-|+.|.+++...|-|
T Consensus        68 ~~gfkp~GWylTlvQf~~Ysg~glie~~~~---~-~k~r~iP~rtY~----~la~~t~gtmGLsn~SlgYLNYPtQviFK  139 (367)
T KOG1582|consen   68 VEGFKPFGWYLTLVQFLVYSGFGLIELQLI---Q-TKRRVIPWRTYV----ILAFLTVGTMGLSNGSLGYLNYPTQVIFK  139 (367)
T ss_pred             cccCcccchHHHHHHHHHHHhhhheEEEee---c-ccceecchhHhh----hhHhhhhhccccCcCccccccCcHHHHHH
Confidence            45676 999999999998877766644321   1 245567887664    48889999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc----cccHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy14361         98 STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT----AFNWLGFSLVLLASFSSGLRWTLAQFVMQRS  173 (223)
Q Consensus        98 s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~----~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~  173 (223)
                      +|..+++++.+.++.++|+.   +..+.+...++.|+..++.-|.    +||..|+.+...+.++||.-.-+||+.++..
T Consensus       140 ccKliPVmiggifIqGkRY~---v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~  216 (367)
T KOG1582|consen  140 CCKLIPVMIGGIFIQGKRYG---VHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMN  216 (367)
T ss_pred             hhhhhhhhheeeeecccccc---HHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhC
Confidence            99999999999999999999   9999999999999999988774    7899999999999999999999999988776

>KOG3912|consensus

Probab=99.28  E-value=6.3e-11  Score=101.74  Aligned_cols=166  Identities=15%  Similarity=0.169  Sum_probs=127.8

Q ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHhhhhcccc-----------ccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhh
Q psy14361         21 IYKYPLSIVVCHLVFKFLVALICRKVYELYTHQK-----------RVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIA   89 (223)
Q Consensus        21 ~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vs   89 (223)
                      +|.+|..++ ..|+.+...|....+..|+....+           ..+.|.+  -...+|=+++-.+...+.|.+|.+.+
T Consensus        35 gfqhpvlqa-l~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~--p~lfl~Pal~Di~gsslm~vgL~lTs  111 (372)
T KOG3912|consen   35 GFQHPVLQA-LLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN--PVLFLPPALCDIAGSSLMYVGLNLTS  111 (372)
T ss_pred             ccccHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC--cceecChHHHHHhhhHHHHHHHHHhh
Confidence            399999998 889999988888776655432111           0001221  23456667788888889999999999


Q ss_pred             HHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc----------cccHHHHHHHHHHHHHH
Q psy14361         90 VSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT----------AFNWLGFSLVLLASFSS  159 (223)
Q Consensus        90 vs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~----------~~~~~G~~l~l~s~~~~  159 (223)
                      .|-+||+|....+||.+++..+++++..   .+.++++.-+..|+++..+.|.          +--..|.++.+++.+.-
T Consensus       112 ASsfQMlRGaviIFvglfst~~Ln~ti~---~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiiv  188 (372)
T KOG3912|consen  112 ASSFQMLRGAVIIFVGLFSTMFLNRTIT---GRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIV  188 (372)
T ss_pred             HHHHHHhhcchhhhhHHHHHHHHhcccc---hhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHH
Confidence            9999999999999999999999999999   7777888888888877665542          22368999999999999


Q ss_pred             HHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHH
Q psy14361        160 GLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSI  215 (223)
Q Consensus       160 al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~l  215 (223)
                      |++.+.+||.++++                      +. +|++..-+-.....+.+
T Consensus       189 aiQ~v~Eek~l~~~----------------------nV-~pl~avg~eGlfG~v~~  221 (372)
T KOG3912|consen  189 AIQMVCEEKQLKKS----------------------NV-APLQAVGWEGLFGLVIL  221 (372)
T ss_pred             HHHHHHHHhhhhhc----------------------cC-CHHHHhhhhhhHHHHHH
Confidence            99999999998887                      34 77777766665554443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.22  E-value=1.6e-10  Score=98.97  Aligned_cols=112  Identities=19%  Similarity=0.267  Sum_probs=95.4

Q ss_pred             chHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee
Q psy14361         59 CWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT  138 (223)
Q Consensus        59 ~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~  138 (223)
                      ++++.++..+| |+++++...+.+.++++.+.+.||+++.+..++++++++++++||.+   .+.+.++.+.+.|+++..
T Consensus        13 ~~~~~~~~~vP-A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls---~~qW~aL~lL~~Gv~lv~   88 (244)
T PF04142_consen   13 SPKDTLKLAVP-ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLS---RRQWLALFLLVAGVVLVQ   88 (244)
T ss_pred             hHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccc---hhhHHHHHHHHHHHheee
Confidence            34555666665 55688888899999999999999999999999999999999999999   777799999999998876


Q ss_pred             ecCcc-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy14361        139 YKATA-----------------FNWLGFSLVLLASFSSGLRWTLAQFVMQRSD  174 (223)
Q Consensus       139 ~~e~~-----------------~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~  174 (223)
                      .++..                 ....|+++++++++++|+..++.|+++|+++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~  141 (244)
T PF04142_consen   89 LSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN  141 (244)
T ss_pred             cCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            54321                 1368999999999999999999999999984

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.10  E-value=4.2e-09  Score=89.63  Aligned_cols=137  Identities=15%  Similarity=0.104  Sum_probs=106.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHH
Q psy14361         24 YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVF  103 (223)
Q Consensus        24 ~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~  103 (223)
                      =|..++...++++.++.....+. +         .+++++.+....-++..+++..+.+.|++|.|++...++.++.|++
T Consensus        17 ~~~~~~~~r~~~~~l~l~~~~~~-~---------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~   86 (260)
T TIGR00950        17 PLYFAVFRRLIFALLLLLPLLRR-R---------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLY   86 (260)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHh-c---------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHH
Confidence            37777878887776665544321 1         1233333333333346788888999999999999999999999999


Q ss_pred             HHHHHHHhhccccchhhhhhhheecceeeeeeeeee-cCccccHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy14361        104 ILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY-KATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRS  173 (223)
Q Consensus       104 v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~-~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~  173 (223)
                      +++++.++.|||++   ++.+.++.+..+|+.+... ++.+.+..|..+++++.++-+...+..++..++.
T Consensus        87 ~~~~~~l~~~e~~~---~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~  154 (260)
T TIGR00950        87 VTLLSDLMGKERPR---KLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKE  154 (260)
T ss_pred             HHHHHHHHccCCCc---HHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC
Confidence            99999999999999   8888999999999877543 3345678899999999999999998888876543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.87  E-value=5.5e-08  Score=87.70  Aligned_cols=143  Identities=13%  Similarity=0.131  Sum_probs=103.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHH
Q psy14361         25 PLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFI  104 (223)
Q Consensus        25 P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v  104 (223)
                      |..+..+-+.++.++...+.+..+..  ++.++.+|++ +..+..+|++..+...+.+.+++|.|.+...++-++.|+++
T Consensus        42 ~~~~~~~R~~iA~l~Ll~~~~~~~~~--~~~~~~~~~~-~~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~  118 (358)
T PLN00411         42 IYPFLGYSYLLASLLLLPSLFFTNRS--RSLPPLSVSI-LSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALT  118 (358)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHh--cccCcchHHH-HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHH
Confidence            44456677777766555443322211  1123334554 34455577765556668999999999999999999999999


Q ss_pred             HHHHHHh------hccccchhhhhhhheecceeeeeeeeee-cCc-----------------------ccc-HHHHHHHH
Q psy14361        105 LIFSLVF------QLEKKSRKRLRLYGESNPGTSGLVMFTY-KAT-----------------------AFN-WLGFSLVL  153 (223)
Q Consensus       105 ~l~~~~~------~~e~~s~~~~~~~~~l~~i~~Gv~l~~~-~e~-----------------------~~~-~~G~~l~l  153 (223)
                      +++++++      ++||.+   +++.+++++..+|+.+... ++.                       +.+ ..|..+++
T Consensus       119 ~lla~~~~~e~~~~~er~~---~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l  195 (358)
T PLN00411        119 FILAIIFRMEKVSFKERSS---VAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLT  195 (358)
T ss_pred             HHHHHHHHhchhhhccccc---HHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHH
Confidence            9999999      599999   8888999998889876432 110                       112 45999999


Q ss_pred             HHHHHHHHHHHHHHHHhccc
Q psy14361        154 LASFSSGLRWTLAQFVMQRS  173 (223)
Q Consensus       154 ~s~~~~al~~v~~q~ll~~~  173 (223)
                      +|+++-|+++++++++.+++
T Consensus       196 ~aa~~wa~~~il~~~~~~~~  215 (358)
T PLN00411        196 IQGIFVSVSFILQAHIMSEY  215 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHc
Confidence            99999999999999987765

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.79  E-value=2.6e-07  Score=80.72  Aligned_cols=134  Identities=16%  Similarity=0.131  Sum_probs=101.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhh-hhhhhHhhhhhh-hhhhHHHHHHHhhhhHH
Q psy14361         25 PLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIA-SGLDVGFSQWGL-RSIAVSLYTMTKSTSVV  102 (223)
Q Consensus        25 P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~-~~~~i~l~N~sl-~~vsvs~~qm~Ks~~pi  102 (223)
                      |..++.+.++++.++........|      +...++++ ++....+|+. .+....+-+.+. +++|++...++-.+.|+
T Consensus        36 p~~~~~~R~~~a~l~ll~~~~~~~------~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl  108 (292)
T PRK11272         36 PLMMAGVRFLIAGILLLAFLLLRG------HPLPTLRQ-WLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPL  108 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC------CCCCcHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence            888888999988777655543211      11123343 4455567765 355667778888 99999999999999999


Q ss_pred             HHHHHHHHhhccccchhhhhhhheecceeeeeeeeeec-CccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361        103 FILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYK-ATAFNWLGFSLVLLASFSSGLRWTLAQFV  169 (223)
Q Consensus       103 ~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~-e~~~~~~G~~l~l~s~~~~al~~v~~q~l  169 (223)
                      ++.+++.+ .|||++   ++.++++.+..+|+.+...+ +.+.+..|..+++++.++-|...+..+++
T Consensus       109 ~~~lla~~-~~e~~~---~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~  172 (292)
T PRK11272        109 FTLCFSRL-FGIRTR---KLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRL  172 (292)
T ss_pred             HHHHHHHH-hcccCc---hhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999986 599999   88889999999998776433 33556789999999999999988887775

>KOG2765|consensus

Probab=98.75  E-value=1.5e-07  Score=83.97  Aligned_cols=136  Identities=18%  Similarity=0.088  Sum_probs=110.2

Q ss_pred             HHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC
Q psy14361         62 NQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA  141 (223)
Q Consensus        62 ~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e  141 (223)
                      +..+.-+-++....+.....|.||.|.+|+-.+++-++.-.||+.++.++..||++   +.+.+++.+-++||.+.+.+|
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft---~sKllav~~si~GViiVt~~~  233 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFT---LSKLLAVFVSIAGVIIVTMGD  233 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhh---HHHHHHHHHhhccEEEEEecc
Confidence            34444444555556677789999999999999999999999999999999999999   999999999999999998885


Q ss_pred             c--------cccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHH
Q psy14361        142 T--------AFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIV  213 (223)
Q Consensus       142 ~--------~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~  213 (223)
                      .        +-...|-+++++|++.-|.+.++-++-..++|                    .+. |=-...-|+..+.++
T Consensus       234 s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg--------------------~rv-di~lffGfvGLfnll  292 (416)
T KOG2765|consen  234 SKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEG--------------------ERV-DIQLFFGFVGLFNLL  292 (416)
T ss_pred             ccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhccccc--------------------ccc-cHHHHHHHHHHHHHH
Confidence            3        23489999999999999988877776655542                    233 556677788999999


Q ss_pred             HHHHHHHh
Q psy14361        214 SILPFAIL  221 (223)
Q Consensus       214 ~ll~~~~~  221 (223)
                      .++|..++
T Consensus       293 llwP~l~i  300 (416)
T KOG2765|consen  293 LLWPPLII  300 (416)
T ss_pred             HHhHHHHH
Confidence            98877654

>KOG1583|consensus

Probab=98.70  E-value=8.6e-09  Score=88.49  Aligned_cols=137  Identities=18%  Similarity=0.197  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhh-hhHHHHHHHhhhhHHHHH
Q psy14361         27 SIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRS-IAVSLYTMTKSTSVVFIL  105 (223)
Q Consensus        27 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~-vsvs~~qm~Ks~~pi~v~  105 (223)
                      .+|..|+++..+-..+..  .|...  .++++|.|+|...   ++. +....+++|.++++ +|++..-+.|+..++.++
T Consensus        35 LITFaqFlFia~eGlif~--skf~~--~k~kiplk~Y~i~---V~m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM  106 (330)
T KOG1583|consen   35 LITFAQFLFIATEGLIFT--SKFFT--VKPKIPLKDYAIT---VAM-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANM  106 (330)
T ss_pred             ehHHHHHHHHHHhceeee--ccccc--cCCCCchhhhhee---hhe-eeeeeeeccceeeecccceEEEEEecCcHHHHH
Confidence            577788877666555432  23222  2466777776542   333 44455679999987 599999999999999999


Q ss_pred             HHHHHhhccccchhhhhhhheecceeeeeeeeeecC---cc--------------cc--HHHHHHHHHHHHHHHHHHHHH
Q psy14361        106 IFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA---TA--------------FN--WLGFSLVLLASFSSGLRWTLA  166 (223)
Q Consensus       106 l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e---~~--------------~~--~~G~~l~l~s~~~~al~~v~~  166 (223)
                      ++++++.+||++   .+++.+++++++|+.+++...   ..              +.  .+|+.+...+.+++|.-.+++
T Consensus       107 ~~g~il~~k~Ys---~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyq  183 (330)
T KOG1583|consen  107 ILGWILLGKRYS---LRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQ  183 (330)
T ss_pred             HHHHHhccceee---hhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999   999999999999999877532   11              11  479999999999999999999


Q ss_pred             HHHhcccc
Q psy14361        167 QFVMQRSD  174 (223)
Q Consensus       167 q~ll~~~~  174 (223)
                      |..-+++|
T Consensus       184 E~~Y~kyG  191 (330)
T KOG1583|consen  184 ETTYQKYG  191 (330)
T ss_pred             HHHHHHhc
Confidence            99988874

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.65  E-value=7.5e-07  Score=78.02  Aligned_cols=134  Identities=14%  Similarity=0.150  Sum_probs=97.8

Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhh-hhhhhHhhhhhhhh-hhHHHHHHHhhh
Q psy14361         22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIA-SGLDVGFSQWGLRS-IAVSLYTMTKST   99 (223)
Q Consensus        22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~-~~~~i~l~N~sl~~-vsvs~~qm~Ks~   99 (223)
                      ++ |..++.+-++++.+......   +.      ++.++    +..+..++. ..+...+...+++| +|.+...++-++
T Consensus        30 ~~-p~~~~~~R~~~a~~~l~~~~---~~------~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~   95 (299)
T PRK11453         30 MP-PLMLAGLRFMLVAFPAIFFV---AR------PKVPL----NLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQA   95 (299)
T ss_pred             CC-HHHHHHHHHHHHHHHHHHHh---cC------CCCch----HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHh
Confidence            44 88888888887654432221   11      11122    223344553 33444566778887 789999999999


Q ss_pred             hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC---ccccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy14361        100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA---TAFNWLGFSLVLLASFSSGLRWTLAQFVMQR  172 (223)
Q Consensus       100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e---~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~  172 (223)
                      .|+++.+++++++|||++   ++.++++++..+|+.+...++   .+.++.|..+++++.++-+.+.++++++.++
T Consensus        96 ~pi~~~ll~~~~l~e~~~---~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~  168 (299)
T PRK11453         96 QAFFTIVLGAFTFGERLQ---GKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSH  168 (299)
T ss_pred             HHHHHHHHHHHHhcCcCc---HHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999   888899999999998765432   2345689999999999999999999987544

>TIGR00688 rarD rarD protein

Probab=98.63  E-value=4.9e-07  Score=77.25  Aligned_cols=138  Identities=11%  Similarity=0.113  Sum_probs=96.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhcc--ccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHH
Q psy14361         25 PLSIVVCHLVFKFLVALICRKVYELYTH--QKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVV  102 (223)
Q Consensus        25 P~~lt~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi  102 (223)
                      |..++.+.++++.+.........+..+.  ++.++.++++......-.|+..+.+..+-+.++++.+++...++-.+.|+
T Consensus        29 ~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi  108 (256)
T TIGR00688        29 ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPL  108 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHH
Confidence            7889989999887665443322221100  00011112222223444666777888899999999999999999999999


Q ss_pred             HHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361        103 FILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFV  169 (223)
Q Consensus       103 ~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~l  169 (223)
                      ++++++.+++|||++   ++.++++.+..+|+.+....+.+.+    .+++++.++-+.+.+..++.
T Consensus       109 ~~~lla~~~l~Ek~~---~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~  168 (256)
T TIGR00688       109 VMVALGRVFLKERIS---RFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKAL  168 (256)
T ss_pred             HHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999   8888999999999876533222222    24566778888887777765

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.63  E-value=4.4e-07  Score=79.46  Aligned_cols=139  Identities=9%  Similarity=0.118  Sum_probs=95.1

Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhH
Q psy14361         22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSV  101 (223)
Q Consensus        22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~p  101 (223)
                      .+ |..++.++++++.+.........+..+..++...++++. ...+.-++..+....+-+.++++.|++...++-.+.|
T Consensus        33 ~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~P  110 (296)
T PRK15430         33 VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINP  110 (296)
T ss_pred             CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence            44 888999999998765544433222100000000122221 2222233457778889999999999999999999999


Q ss_pred             HHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361        102 VFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFV  169 (223)
Q Consensus       102 i~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~l  169 (223)
                      ++++++++++++||++   ++.++++++...|+.+....+.+..    .+.+++.++-|.+.+..++.
T Consensus       111 i~v~l~~~~~l~E~~~---~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~r~~  171 (296)
T PRK15430        111 LVNIVLGMIFLGERFR---RMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFYGLVRKKI  171 (296)
T ss_pred             HHHHHHHHHHhcCCCc---HHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999   8888999999999987543222222    34666777777777766664

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.59  E-value=1.2e-06  Score=76.64  Aligned_cols=137  Identities=12%  Similarity=0.034  Sum_probs=98.1

Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhh----hhHHHHHHHh
Q psy14361         22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRS----IAVSLYTMTK   97 (223)
Q Consensus        22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~----vsvs~~qm~K   97 (223)
                      ++ |..++++-+..+.++.....   +. +  +.++.    ..+..+..++..++...+.+.+++|    .+.+...++-
T Consensus        30 ~~-P~~~~~~R~~~a~l~l~~~~---~~-~--~~~~~----~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~   98 (295)
T PRK11689         30 LG-PVGGAAMIYSVSGLLLLLTV---GF-P--RLRQF----PKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVN   98 (295)
T ss_pred             CC-hHHHHHHHHHHHHHHHHHHc---cc-c--ccccc----cHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHH
Confidence            44 88898888888766655432   11 1  11111    1233344455566777777777765    4566678889


Q ss_pred             hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc-----------cccHHHHHHHHHHHHHHHHHHHHH
Q psy14361         98 STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT-----------AFNWLGFSLVLLASFSSGLRWTLA  166 (223)
Q Consensus        98 s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~-----------~~~~~G~~l~l~s~~~~al~~v~~  166 (223)
                      ++.|+++.++++++.+||++   +++++++++...|+.+...++.           ..+..|.+++++|.++-|.+.++.
T Consensus        99 ~~~Pi~~~ll~~~~~~e~~~---~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~  175 (295)
T PRK11689         99 YLWPSLTILFAVLFNGQKAN---WLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVT  175 (295)
T ss_pred             HHhHHHHHHHHHHHhcCCcc---HHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999   8888999999999977654432           123569999999999999999988


Q ss_pred             HHHhcc
Q psy14361        167 QFVMQR  172 (223)
Q Consensus       167 q~ll~~  172 (223)
                      +++.++
T Consensus       176 k~~~~~  181 (295)
T PRK11689        176 RKYARG  181 (295)
T ss_pred             hhccCC
Confidence            887433

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.47  E-value=8.7e-06  Score=71.16  Aligned_cols=133  Identities=12%  Similarity=0.054  Sum_probs=93.2

Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhH
Q psy14361         22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSV  101 (223)
Q Consensus        22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~p  101 (223)
                      ++ |..+..+.++++.++.....+.  .     +.+.++++ ++..+..|++......+.+.+++|+|.+...++-.+.|
T Consensus        38 ~~-~~~~~~~R~~~a~l~l~~~~~~--~-----~~~~~~~~-~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~P  108 (293)
T PRK10532         38 VG-APGVTALRLALGTLILIAIFKP--W-----RLRFAKEQ-RLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGP  108 (293)
T ss_pred             cC-HHHHHHHHHHHHHHHHHHHHhH--H-----hccCCHHH-HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence            44 6778889998887766654321  1     11234443 34566678877777888899999999999999999999


Q ss_pred             HHHHHHHHHhhccccchhhhhhhheecceeeeeeeeee-c--CccccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy14361        102 VFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY-K--ATAFNWLGFSLVLLASFSSGLRWTLAQFVMQR  172 (223)
Q Consensus       102 i~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~-~--e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~  172 (223)
                      +++++++.    |+++   ....  +.+...|+.+... +  ..+.+..|.++++++.++-+.+.+..++..++
T Consensus       109 i~~~ll~~----~~~~---~~~~--~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~  173 (293)
T PRK10532        109 LAVALFSS----RRPV---DFVW--VVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE  173 (293)
T ss_pred             HHHHHHhc----CChH---HHHH--HHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99988762    5544   3333  3444677665432 1  23456789999999999999998888877443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.44  E-value=3.2e-07  Score=68.69  Aligned_cols=107  Identities=21%  Similarity=0.148  Sum_probs=82.1

Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhh-hhhhhHhhhhhhhhhhHHHHHHHhhhh
Q psy14361         22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIA-SGLDVGFSQWGLRSIAVSLYTMTKSTS  100 (223)
Q Consensus        22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~-~~~~i~l~N~sl~~vsvs~~qm~Ks~~  100 (223)
                      ++ |...+.++++.+.+ ........+..   +..+.+++++ ...+.+++. ..+...+.+.++++.+++...++..+.
T Consensus        17 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~   90 (126)
T PF00892_consen   17 IS-PLSITFWRFLIAGI-LLILLLILGRK---PFKNLSPRQW-LWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLS   90 (126)
T ss_pred             CC-HHHHHHHHHHHHHH-HHHHHHhhccc---cccCCChhhh-hhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHH
Confidence            44 77788899888886 44443332211   1234444443 445556665 688999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361        101 VVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus       101 pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      |+++.++++++++|+++   +++++++.++++|+.+.
T Consensus        91 pv~~~i~~~~~~~e~~~---~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   91 PVFAAILGWLFLGERPS---WRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHHHHHHcCCCCC---HHHHHHHHHHHHHHHHH
Confidence            99999999999999999   88889999988887654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.37  E-value=2.5e-05  Score=66.49  Aligned_cols=103  Identities=15%  Similarity=0.087  Sum_probs=88.4

Q ss_pred             HHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHH-HhhccccchhhhhhhheecceeeeeeeeeecCcc
Q psy14361         65 HKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSL-VFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA  143 (223)
Q Consensus        65 ~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~-~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~  143 (223)
                      +..+.-++.......+-+.++++.+++..+.+.++.|+++.+++. ++++||++   ++++.++.....|+.+....+..
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~---~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          71 LLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLS---LLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCc---HHHHHHHHHHHHhHHheecCCCc
Confidence            344545557788888999999999999999999999999999996 77799999   88888899999999988776654


Q ss_pred             c---cHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14361        144 F---NWLGFSLVLLASFSSGLRWTLAQFVM  170 (223)
Q Consensus       144 ~---~~~G~~l~l~s~~~~al~~v~~q~ll  170 (223)
                      .   ...|..+++++.+..++..+..+++.
T Consensus       148 ~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         148 GGILSLLGLLLALAAALLWALYTALVKRLS  177 (292)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3   36899999999999999999888876

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.36  E-value=3.4e-06  Score=73.15  Aligned_cols=104  Identities=13%  Similarity=0.004  Sum_probs=84.0

Q ss_pred             HHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC-
Q psy14361         63 QLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA-  141 (223)
Q Consensus        63 ~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e-  141 (223)
                      ++...+..++.......+.+.++++.|++....+-.+.|+++.++++++++|+++   ++.++++.++.+|+.+....+ 
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~---~~~~~g~~~~~~Gv~ll~~~~~  138 (281)
T TIGR03340        62 FWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLS---PLAWLGILIITLGLLVLGLSRF  138 (281)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHHHHHhcccc
Confidence            3444554555677888899999999999999999999999999999999999999   888899999999997654333 


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361        142 TAFNWLGFSLVLLASFSSGLRWTLAQFV  169 (223)
Q Consensus       142 ~~~~~~G~~l~l~s~~~~al~~v~~q~l  169 (223)
                      .+.+..|..+++++.++.+.+.+..++.
T Consensus       139 ~~~~~~g~~~~l~aal~~a~~~i~~k~~  166 (281)
T TIGR03340       139 AQHRRKAYAWALAAALGTAIYSLSDKAA  166 (281)
T ss_pred             cccchhHHHHHHHHHHHHHHhhhhcccc
Confidence            2355678888888888888877655443

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.30  E-value=2.3e-06  Score=67.04  Aligned_cols=58  Identities=31%  Similarity=0.576  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361        148 GFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE  223 (223)
Q Consensus       148 G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E  223 (223)
                      |++++++|++++|+|+++.|++++++..+                 +.+. |++++++|++|++++.++|.+++.|
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~-----------------~~~~-~~~~l~~~~~~~s~~~l~~~~~~~e   58 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSN-----------------SKKL-NPLNLLYYNSPISFIILLPLAFLLE   58 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhccccc-----------------ccCC-CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            78999999999999999999999885211                 2345 9999999999999999999999877

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.28  E-value=1.2e-06  Score=73.45  Aligned_cols=172  Identities=15%  Similarity=0.107  Sum_probs=125.2

Q ss_pred             CccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHh
Q psy14361         18 YRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTK   97 (223)
Q Consensus        18 ~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~K   97 (223)
                      ...+|+-...+-..|-.++.+...++.+ .|..+-    |  .++ .++..|+++.-...+..+.-||+|.+||.|++.|
T Consensus        30 s~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~f----R--~t~-aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFK  101 (309)
T COG5070          30 SNLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEF----R--LTK-AKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFK  101 (309)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhhe----e--hhh-hhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhc
Confidence            3467887778888999988777666543 354331    1  222 4566899999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcccc-------HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14361         98 STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFN-------WLGFSLVLLASFSSGLRWTLAQFVM  170 (223)
Q Consensus        98 s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~-------~~G~~l~l~s~~~~al~~v~~q~ll  170 (223)
                      -++.+.++.....+++++..   -....+..+++..-.++..+|.+-.       -.|.+.+...++.++..-....+-.
T Consensus       102 NltII~iAygEvl~Fgg~vt---sl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri  178 (309)
T COG5070         102 NLTIILIAYGEVLFFGGRVT---SLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRI  178 (309)
T ss_pred             cceeehhHhhHHHHhcCccc---hhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhh
Confidence            99999999999998888887   6667777777666666777886321       2477777777776665433333322


Q ss_pred             cccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361        171 QRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE  223 (223)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E  223 (223)
                      +-.                       ...-.+.+||-...+.=.|+.+.+++|
T Consensus       179 ~lt-----------------------Nf~d~dtmfYnNllslPiL~~~s~~~e  208 (309)
T COG5070         179 KLT-----------------------NFKDFDTMFYNNLLSLPILLSFSFLFE  208 (309)
T ss_pred             ccc-----------------------ccchhhHHHHhhhHHHHHHHHHHHHhc
Confidence            221                       114478899988888888888888776

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.28  E-value=1.1e-06  Score=66.35  Aligned_cols=74  Identities=18%  Similarity=0.188  Sum_probs=63.4

Q ss_pred             HHHHHHhhh-hhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcc
Q psy14361         66 KIAPTGIAS-GLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA  143 (223)
Q Consensus        66 ~~lplsi~~-~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~  143 (223)
                      ..+..|+.. ..+..+-+.|+++.| +....+.++.|+++++++.++++||++   ++.++++.++.+|+.+...+|.+
T Consensus        36 ~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~---~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   36 WLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLS---PRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHHHHHhhhhcc
Confidence            344456654 478889999999999 688899999999999999999999999   88889999999999987776643

>KOG2234|consensus

Probab=98.17  E-value=2.1e-05  Score=70.00  Aligned_cols=131  Identities=18%  Similarity=0.260  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC
Q psy14361         62 NQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA  141 (223)
Q Consensus        62 ~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e  141 (223)
                      +..+..+| ++.|++..-+...++.+.+.++||+.--.....|+++.+++++||.+   ++.+.++++...|+++.-.++
T Consensus        91 ~~lk~~vP-a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs---~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen   91 ETLKVSVP-ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLS---RLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHHHHHHH-HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHHHHHHHhccC
Confidence            44555555 44666666688899999999999999999999999999999999999   777799999999998765211


Q ss_pred             -----------ccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHH
Q psy14361        142 -----------TAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPW  210 (223)
Q Consensus       142 -----------~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~  210 (223)
                                 .+-.+.|+...+.+++.+|+-.++-|+++++.+..                  .-+ ..+++..+-.+.
T Consensus       167 ~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s------------------~wi-~NiqL~~~g~~f  227 (345)
T KOG2234|consen  167 LSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVS------------------LWI-RNIQLYFFGILF  227 (345)
T ss_pred             CCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCch------------------HHH-HHHHHHHHHHHH
Confidence                       12358999999999999999999999999887322                  112 557777777766


Q ss_pred             HHHHH
Q psy14361        211 MIVSI  215 (223)
Q Consensus       211 s~~~l  215 (223)
                      +++.+
T Consensus       228 ~~l~~  232 (345)
T KOG2234|consen  228 NLLTI  232 (345)
T ss_pred             HHHHH
Confidence            66554

>KOG4314|consensus

Probab=97.99  E-value=1.9e-05  Score=65.38  Aligned_cols=116  Identities=15%  Similarity=0.122  Sum_probs=101.8

Q ss_pred             ccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361         57 LLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM  136 (223)
Q Consensus        57 ~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l  136 (223)
                      ....|.+.++..|+++...+....--.+|+.++.|-..-+-+|.-.|+.+++++.+++++.   -.+.++..+-+.|+++
T Consensus        46 G~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~---~~kIlaailAI~GiVm  122 (290)
T KOG4314|consen   46 GFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFM---GFKILAAILAIGGIVM  122 (290)
T ss_pred             CceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchh---hhhHHHHHHHhCcEEE
Confidence            3444556677899999998888888899999999999999999999999999999999998   7788999999999999


Q ss_pred             eeecC--ccccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy14361        137 FTYKA--TAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDL  175 (223)
Q Consensus       137 ~~~~e--~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~  175 (223)
                      .+|-|  ...+++|+.++..|.++++++-+.-+..+++.+.
T Consensus       123 iay~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~  163 (290)
T KOG4314|consen  123 IAYADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANF  163 (290)
T ss_pred             EEeccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence            88755  4568999999999999999999999988877643

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.61  E-value=0.0019  Score=56.52  Aligned_cols=96  Identities=16%  Similarity=0.019  Sum_probs=76.4

Q ss_pred             HhhhhhhhHhhhhhhhhhhHHHHHHHhh-hhHHHHHHHHHHhhccccchhhhhh----hheecceeeeeeeeeecCcc--
Q psy14361         71 GIASGLDVGFSQWGLRSIAVSLYTMTKS-TSVVFILIFSLVFQLEKKSRKRLRL----YGESNPGTSGLVMFTYKATA--  143 (223)
Q Consensus        71 si~~~~~i~l~N~sl~~vsvs~~qm~Ks-~~pi~v~l~~~~~~~e~~s~~~~~~----~~~l~~i~~Gv~l~~~~e~~--  143 (223)
                      |+..+....+...+.++..++....+-. ..++++.+++.++++|+.+   .+.    .+++++++.|+.+.+..+.+  
T Consensus        66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t---~~~~~~~~~g~~l~l~G~~l~~~~~~~~~  142 (290)
T TIGR00776        66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWST---SIQTLLGLLALILIIIGVYLTSRSKDKSA  142 (290)
T ss_pred             HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccc---hHHHHHHHHHHHHHHHhHheEEecccccc
Confidence            3335556677788889999999988877 7777889999999999998   555    88899999999887653321  


Q ss_pred             -----cc-HHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361        144 -----FN-WLGFSLVLLASFSSGLRWTLAQFV  169 (223)
Q Consensus       144 -----~~-~~G~~l~l~s~~~~al~~v~~q~l  169 (223)
                           .+ ..|+..+++|.+.-+.+.+..+.+
T Consensus       143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~  174 (290)
T TIGR00776       143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF  174 (290)
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHc
Confidence                 33 789999999999999888877754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2766|consensus

Probab=97.52  E-value=0.00013  Score=62.59  Aligned_cols=142  Identities=13%  Similarity=0.067  Sum_probs=96.6

Q ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh
Q psy14361         20 WIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST   99 (223)
Q Consensus        20 ~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~   99 (223)
                      .+.+-|..+|.+....-+++=-.+.. +|.    +..+..|    +..+.+|+.-.-...+--.+++|.+..-.+.+-+-
T Consensus        43 k~iN~Pt~QtFl~Y~LLalVY~~~~~-fR~----~~~~~~~----~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcw  113 (336)
T KOG2766|consen   43 KGINAPTSQTFLNYVLLALVYGPIML-FRR----KYIKAKW----RHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCW  113 (336)
T ss_pred             ccCCCccHHHHHHHHHHHHHHhhHHH-hhh----HHHHHHH----HHhhheeEEeecccEEEeeehhhcchHHHHHHHHh
Confidence            34677888776655443332221111 111    1122223    33444666555444455689999999999999999


Q ss_pred             hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcc--------ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy14361        100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA--------FNWLGFSLVLLASFSSGLRWTLAQFVMQ  171 (223)
Q Consensus       100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~--------~~~~G~~l~l~s~~~~al~~v~~q~ll~  171 (223)
                      ..+.+++++++|++.|++   +.+...+++.++||.+....|..        -...|-.++++++-+-|..++.+|.+.+
T Consensus       114 aip~v~~lsw~fLktrYr---lmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk  190 (336)
T KOG2766|consen  114 AIPCVLVLSWFFLKTRYR---LMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK  190 (336)
T ss_pred             hhHHHHHHHHHHHHHHHh---hheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh
Confidence            999999999999999988   99999999999999987765531        2246777777777777777777777665


Q ss_pred             cc
Q psy14361        172 RS  173 (223)
Q Consensus       172 ~~  173 (223)
                      +.
T Consensus       191 n~  192 (336)
T KOG2766|consen  191 NA  192 (336)
T ss_pred             cC
Confidence            54

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.44  E-value=0.00061  Score=51.41  Aligned_cols=63  Identities=17%  Similarity=0.156  Sum_probs=57.8

Q ss_pred             hhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361         72 IASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus        72 i~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      +++.++..+--.+++.+|+|....+-+..++++.+.++++++|+++   +++.+.+.++++|+.+.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls---~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVS---PRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHH
Confidence            3577788899999999999999999999999999999999999999   99999999999998654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.34  E-value=0.0012  Score=55.97  Aligned_cols=100  Identities=14%  Similarity=0.015  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhh-hhhhhHhhhhhhhhhhHHHHHHHhhhhHHHH
Q psy14361         26 LSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIA-SGLDVGFSQWGLRSIAVSLYTMTKSTSVVFI  104 (223)
Q Consensus        26 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~-~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v  104 (223)
                      ...+.+++.++.+.........+     +....+++++ ..++-++++ ......+-+.++++.+++.......+.|++.
T Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~  232 (260)
T TIGR00950       159 LQFTGWVLLLGALLLLPFAWFLG-----PNPQALSLQW-GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVA  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC-----CCCCcchHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence            34454677777666655443211     1122234333 234445553 5677778999999999999999999999999


Q ss_pred             HHHHHHhhccccchhhhhhhheecceeeee
Q psy14361        105 LIFSLVFQLEKKSRKRLRLYGESNPGTSGL  134 (223)
Q Consensus       105 ~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv  134 (223)
                      +++++++++|+++   ...+.+..++..|+
T Consensus       233 ~ll~~~~~~E~~~---~~~~~G~~li~~g~  259 (260)
T TIGR00950       233 LLLGLLILGETLS---LPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHhCCCCC---HHHHHHHHHHHHhc
Confidence            9999999999999   88888888888776

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.29  E-value=0.00036  Score=53.83  Aligned_cols=109  Identities=18%  Similarity=0.120  Sum_probs=82.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHH
Q psy14361         25 PLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFI  104 (223)
Q Consensus        25 P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v  104 (223)
                      |.+-|.+--.+..+++.......+..+  ...+++.|. +..+..-|+..+++-.+=..+++--.+|-..-+-.+.|+++
T Consensus        31 p~~At~IRtiVi~~~l~~v~~~~g~~~--~~~~~~~k~-~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~  107 (140)
T COG2510          31 PDFATTIRTIVILIFLLIVLLVTGNWQ--AGGEIGPKS-WLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLA  107 (140)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcee--cccccCcce-ehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHH
Confidence            667777777777666666554433322  122344443 34445466778888888889999999998888899999999


Q ss_pred             HHHHHHhhccccchhhhhhhheecceeeeeeeeee
Q psy14361        105 LIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY  139 (223)
Q Consensus       105 ~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~  139 (223)
                      +++++++++||++   .+.++.+.+|+.|+.+.+.
T Consensus       108 ~lls~lfL~E~ls---~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510         108 VLLSILFLGERLS---LPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHhcCCCC---HHHHHHHHHHHhCeeeEec
Confidence            9999999999999   9999999999999988653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=96.96  E-value=0.002  Score=58.24  Aligned_cols=67  Identities=15%  Similarity=0.168  Sum_probs=53.5

Q ss_pred             HHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361         67 IAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM  136 (223)
Q Consensus        67 ~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l  136 (223)
                      ++-.+++.++...+-|.++++.+.+...+.-...|++.+++++++++|+++   +..++..++|..|+.+
T Consensus       259 i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt---~~~~iG~~LIl~Gv~l  325 (358)
T PLN00411        259 IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLY---LGCLIGGILITLGFYA  325 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCc---HHHHHHHHHHHHHHHH
Confidence            333455555566689999999999999999999999999999999999999   8666655555555444

>KOG4510|consensus

Probab=96.84  E-value=0.0014  Score=56.68  Aligned_cols=95  Identities=16%  Similarity=0.164  Sum_probs=73.6

Q ss_pred             HhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee-----ecCc---
Q psy14361         71 GIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT-----YKAT---  142 (223)
Q Consensus        71 si~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~-----~~e~---  142 (223)
                      |+.....+.+...|++|.|.+=..++-.++|+|+.+++++++||+++   ....+...+...||.+..     .||.   
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t---~~eaL~s~itl~GVVLIvRPpFlFG~~t~g  180 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFT---KFEALGSLITLLGVVLIVRPPFLFGDTTEG  180 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCc---HHHHHHHHHhhheEEEEecCCcccCCCccc
Confidence            55555677789999999999999999999999999999999999999   666677777778887743     3432   


Q ss_pred             ------cccHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361        143 ------AFNWLGFSLVLLASFSSGLRWTLAQF  168 (223)
Q Consensus       143 ------~~~~~G~~l~l~s~~~~al~~v~~q~  168 (223)
                            +.+..|...++.|.+..+--++.-.+
T Consensus       181 ~~~s~~~~~~~gt~aai~s~lf~asvyIilR~  212 (346)
T KOG4510|consen  181 EDSSQVEYDIPGTVAAISSVLFGASVYIILRY  212 (346)
T ss_pred             cccccccccCCchHHHHHhHhhhhhHHHHHHH
Confidence                  24567888888887777655444433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=96.74  E-value=0.0045  Score=53.98  Aligned_cols=109  Identities=13%  Similarity=0.023  Sum_probs=76.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHH
Q psy14361         24 YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVV  102 (223)
Q Consensus        24 ~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi  102 (223)
                      .|...+.+++.++.............   ......+.+. +..++-+++ ...+...+-+.++++.+.+...+.-...|+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi  251 (292)
T PRK11272        176 VGMMAGAAEMLAAGVVLLIASLLSGE---RLTALPTLSG-FLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPV  251 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCC---cccccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence            35556678888876665554322110   0011123333 334455566 356677789999999999999999999999


Q ss_pred             HHHHHHHHhhccccchhhhhhhheecceeeeeeeeee
Q psy14361        103 FILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY  139 (223)
Q Consensus       103 ~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~  139 (223)
                      +.+++++++++|+++   +..+++..++..|+.+...
T Consensus       252 ~a~i~~~~~l~E~~t---~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        252 VAVLLGTGLGGETLS---PIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHcCCCCc---HHHHHHHHHHHHHHHHHHH
Confidence            999999999999999   8888888888877765443

>TIGR00803 nst UDP-galactose transporter

Probab=96.65  E-value=0.0026  Score=53.20  Aligned_cols=83  Identities=18%  Similarity=0.156  Sum_probs=68.3

Q ss_pred             hhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc-------------------------
Q psy14361         88 IAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT-------------------------  142 (223)
Q Consensus        88 vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~-------------------------  142 (223)
                      +++|.....|+..++++++..+.+.+|+++   ..++++.++++.|+.....+|.                         
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~---~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~   78 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT---QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTL   78 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeee---hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccc
Confidence            578899999999999999999999999999   8888888888888764222211                         


Q ss_pred             --cccHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy14361        143 --AFNWLGFSLVLLASFSSGLRWTLAQFVMQRS  173 (223)
Q Consensus       143 --~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~  173 (223)
                        ...+.|....+.+.+.+++..+++|+.++++
T Consensus        79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~  111 (222)
T TIGR00803        79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDG  111 (222)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence              2357889999999999999999999886654

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=96.25  E-value=0.028  Score=43.69  Aligned_cols=73  Identities=11%  Similarity=0.096  Sum_probs=62.9

Q ss_pred             HHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee
Q psy14361         63 QLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT  138 (223)
Q Consensus        63 ~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~  138 (223)
                      ....++..++...+....+...+++.|.-+++++...+.+++.++++++++|+++   +..+.++.+..+|+.+-+
T Consensus        80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t---~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPIT---PLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCC---HHHHHHHHHHHHHHheee
Confidence            4455555666777777789999999999999999999999999999999999999   988899999888887654

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=95.88  E-value=0.0082  Score=46.53  Aligned_cols=69  Identities=16%  Similarity=0.050  Sum_probs=59.9

Q ss_pred             HHHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHH--hhccccchhhhhhhheecceeeeeeeeee
Q psy14361         68 APTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLV--FQLEKKSRKRLRLYGESNPGTSGLVMFTY  139 (223)
Q Consensus        68 lplsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~--~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~  139 (223)
                      +.+|+ +++++..+-+.+++.+|+|...-.-+..++.+.+.++.  +++|+.+   +.+++.+.+|++|+.+...
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls---~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFS---LKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCC---HHHHHHHHHHHHHHHHhcc
Confidence            33666 68889999999999999999999888888888888874  8999999   9999999999999987654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=95.73  E-value=0.008  Score=52.03  Aligned_cols=67  Identities=21%  Similarity=0.301  Sum_probs=57.5

Q ss_pred             HHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361         67 IAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM  136 (223)
Q Consensus        67 ~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l  136 (223)
                      +...++...+...+-+.++++.+.+........+|++..++++++++|+++   +..++...++..|+.+
T Consensus       214 ~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~---~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       214 ATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWY---LTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCcc---HHHHHHHHHHHHhHHh
Confidence            333444566778889999999999999999999999999999999999999   8888989888888754

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.45  E-value=0.016  Score=44.42  Aligned_cols=65  Identities=20%  Similarity=0.283  Sum_probs=57.4

Q ss_pred             HHhhhhhhhHhhhhhhhhhhHHHHHHH-hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361         70 TGIASGLDVGFSQWGLRSIAVSLYTMT-KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus        70 lsi~~~~~i~l~N~sl~~vsvs~~qm~-Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      .-++++++..+-..+++++|++...-+ .+.-.+.+.+.++++++|+++   +.+.+.+.+|++|+...
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s---~~~~~gi~lIi~GVi~l  101 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLS---LMKIAGLTTLVAGIVLI  101 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHh
Confidence            455788899999999999999987776 578899999999999999999   99999999999998664

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=95.26  E-value=0.1  Score=45.51  Aligned_cols=60  Identities=12%  Similarity=0.099  Sum_probs=49.0

Q ss_pred             HHHHHhh-hhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecc
Q psy14361         67 IAPTGIA-SGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNP  129 (223)
Q Consensus        67 ~lplsi~-~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~  129 (223)
                      .+-++++ ..+...+-|.++++.+.+...+.-..+|++..++++++++|+++   +..++...+
T Consensus       211 ~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~---~~~~iG~~l  271 (293)
T PRK10532        211 GLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLT---LIQWLALGA  271 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCc---HHHHHHHHH
Confidence            3456663 56677788999999999999999999999999999999999998   644443333

>PRK11689 aromatic amino acid exporter; Provisional

Probab=94.91  E-value=0.033  Score=48.63  Aligned_cols=76  Identities=12%  Similarity=0.089  Sum_probs=61.7

Q ss_pred             cchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361         58 LCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus        58 ~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      .+++.+ -.++-.++...+...+-|.++++.+.+...+.-...|++.+++++++.+|+++   +..++..++|.+|+.+.
T Consensus       210 ~~~~~~-~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~---~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        210 FSLPAI-IKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLS---FSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             CCHHHH-HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCc---HHHHHHHHHHHHhHHHH
Confidence            344433 33444556666777889999999999999999999999999999999999999   88888888888877554

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=94.89  E-value=0.36  Score=42.28  Aligned_cols=84  Identities=18%  Similarity=0.166  Sum_probs=59.6

Q ss_pred             hhhhhhHhhhhhhhhhhHHHHHHHh-----hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHH
Q psy14361         73 ASGLDVGFSQWGLRSIAVSLYTMTK-----STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWL  147 (223)
Q Consensus        73 ~~~~~i~l~N~sl~~vsvs~~qm~K-----s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~  147 (223)
                      ..+.-...+|+.+--=.+.--+++-     ...|.+.++++.+|+|||++   +...+++++-.+||..-...-.+++|.
T Consensus        76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls---~~Q~iAV~lA~~GV~~~~~~~g~lpwv  152 (293)
T COG2962          76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLS---RLQWIAVGLAAAGVLIQTWLLGSLPWV  152 (293)
T ss_pred             HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHcCCCcHH
Confidence            3344445566665433333333333     45899999999999999999   667799999999998876666788999


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy14361        148 GFSLVLLASFSSGLRW  163 (223)
Q Consensus       148 G~~l~l~s~~~~al~~  163 (223)
                      .+.++    +.-+++.
T Consensus       153 al~la----~sf~~Yg  164 (293)
T COG2962         153 ALALA----LSFGLYG  164 (293)
T ss_pred             HHHHH----HHHHHHH
Confidence            88887    4444544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=94.83  E-value=0.21  Score=44.06  Aligned_cols=70  Identities=20%  Similarity=0.054  Sum_probs=58.9

Q ss_pred             HHHHHHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361         65 HKIAPTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus        65 ~~~lplsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      +....+|+ .++++-+++-.||.+.|.+..|-+-+...++.++++..+.+||++   ++.+.++..++.|..+.
T Consensus        50 ~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~---~~~~~G~~l~i~G~~li  120 (300)
T PF05653_consen   50 RPLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLT---RRDIVGCALIILGSVLI  120 (300)
T ss_pred             hHHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccch---HhHHhhHHHHHhhheee
Confidence            34455666 466777888999999999999999999999999999999999999   77778888888887653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=94.57  E-value=0.15  Score=44.52  Aligned_cols=71  Identities=11%  Similarity=-0.098  Sum_probs=55.6

Q ss_pred             HHHHHHHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361         64 LHKIAPTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus        64 ~~~~lplsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      +..++-+++ ...+...+-+.++++.+.+...++-..+|++..++++++++|+++   +..++...+++.|+.+.
T Consensus       214 ~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~---~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        214 ILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLT---GLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCcc---HHHHHHHHHHHHHHHHH
Confidence            344444554 455677788889999999999999999999999999999999999   77666666666666543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=94.33  E-value=0.17  Score=38.14  Aligned_cols=65  Identities=17%  Similarity=0.042  Sum_probs=56.5

Q ss_pred             HHhhhhhhhHhhhhhhhhhhHHHHHHHhh-hhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361         70 TGIASGLDVGFSQWGLRSIAVSLYTMTKS-TSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus        70 lsi~~~~~i~l~N~sl~~vsvs~~qm~Ks-~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      .-+++.++..+-..+++.+|+|...-+-+ ...+.+.+.++++++|+.+   +.+.+.+.+|++|+...
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~---~~~~~gi~lIi~GVi~l  101 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD---LPAIIGMMLICAGVLVI  101 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHH
Confidence            34478888888899999999999888865 6788889999999999999   99999999999998764

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=94.27  E-value=1  Score=39.00  Aligned_cols=127  Identities=14%  Similarity=0.082  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHH
Q psy14361         26 LSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFIL  105 (223)
Q Consensus        26 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~  105 (223)
                      .-.|++...++.++...++|=   .    +.+.++++ ++.++..|++-+....+=+.|+..+|.+....+..+-|+.+.
T Consensus        41 ~g~t~lRl~~aaLIll~l~RP---w----r~r~~~~~-~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA  112 (292)
T COG5006          41 AGVTALRLAIAALILLALFRP---W----RRRLSKPQ-RLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVA  112 (292)
T ss_pred             hhHHHHHHHHHHHHHHHHhhH---H----HhccChhh-hHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHH
Confidence            345556666655555544331   1    23445553 567777888888877888899999999999999999999887


Q ss_pred             HHHHHhhccccchhhhhhhheecceeeeeeeeee-c--CccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361        106 IFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY-K--ATAFNWLGFSLVLLASFSSGLRWTLAQFV  169 (223)
Q Consensus       106 l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~-~--e~~~~~~G~~l~l~s~~~~al~~v~~q~l  169 (223)
                      +++    .||.+     ....+.+...|+.+-.. +  -.+.|..|..+++.+-.+=+.|-+..|+.
T Consensus       113 ~~~----sRr~~-----d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~  170 (292)
T COG5006         113 LLS----SRRLR-----DFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRA  170 (292)
T ss_pred             HHh----ccchh-----hHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchh
Confidence            653    44443     22334444455543322 2  24689999999998888888776666655

>PRK11431 multidrug efflux system protein; Provisional

Probab=93.91  E-value=0.079  Score=39.60  Aligned_cols=65  Identities=17%  Similarity=0.105  Sum_probs=55.5

Q ss_pred             HHhhhhhhhHhhhhhhhhhhHHHHHHHhh-hhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361         70 TGIASGLDVGFSQWGLRSIAVSLYTMTKS-TSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus        70 lsi~~~~~i~l~N~sl~~vsvs~~qm~Ks-~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      .-++++.+..+-..+++.+|++..--+=+ .-.+.+.+.++++++|+.+   +.+.+.+.++++|+...
T Consensus        35 ~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~---~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         35 TVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESAS---PARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHhh
Confidence            44578888889999999999998665544 6778899999999999999   99999999999998764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=93.63  E-value=0.24  Score=37.12  Aligned_cols=64  Identities=16%  Similarity=0.087  Sum_probs=54.3

Q ss_pred             HHhhhhhhhHhhhhhhhhhhHHHHHHH-hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361         70 TGIASGLDVGFSQWGLRSIAVSLYTMT-KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM  136 (223)
Q Consensus        70 lsi~~~~~i~l~N~sl~~vsvs~~qm~-Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l  136 (223)
                      .-+++..+..+--.+++.+|++..--+ -..-.+.+.+.++++++|+.+   ..+.+++.+++.|+..
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~---~~~~~gl~LiiaGvi~  100 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS---LIKLLGLALILAGVIG  100 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC---HHHHHHHHHHHHHHHH
Confidence            445788888899999999999985544 456777899999999999999   9999999999999865

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=93.61  E-value=0.065  Score=46.76  Aligned_cols=65  Identities=11%  Similarity=0.044  Sum_probs=52.7

Q ss_pred             HHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeee
Q psy14361         67 IAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGL  134 (223)
Q Consensus        67 ~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv  134 (223)
                      ++..++.......+-|.++++.+.+.....-...|++..++++++++|+++   +..+.....|..|+
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~---~~~~~G~~lI~~~~  280 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPG---ADKMVTFAFIWVAL  280 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHH
Confidence            343555666778899999999999999999999999999999999999999   76555555554333

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=93.35  E-value=0.14  Score=38.49  Aligned_cols=64  Identities=11%  Similarity=-0.037  Sum_probs=54.2

Q ss_pred             HHhhhhhhhHhhhhhhhhhhHHHHHHHh-hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361         70 TGIASGLDVGFSQWGLRSIAVSLYTMTK-STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM  136 (223)
Q Consensus        70 lsi~~~~~i~l~N~sl~~vsvs~~qm~K-s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l  136 (223)
                      .-++++++..+-..+++.+|++..--+= +.-.+.+.+.++++++|+.+   +.+.+.+.++++|+..
T Consensus        41 ~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~---~~~~~gi~lIi~GVi~  105 (109)
T PRK10650         41 SLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLN---RKGWIGLVLLLAGMVM  105 (109)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCC---HHHHHHHHHHHHHHHH
Confidence            4456778888999999999999866554 46778889999999999999   9999999999999864

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=93.16  E-value=0.068  Score=46.63  Aligned_cols=53  Identities=13%  Similarity=0.090  Sum_probs=40.6

Q ss_pred             HhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeee
Q psy14361         79 GFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGL  134 (223)
Q Consensus        79 ~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv  134 (223)
                      .+.+.++++.+.+.+.+.-...|++++++++++.+|+++   +..++...++.+|+
T Consensus       236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt---~~~~~G~~lil~Gv  288 (302)
T TIGR00817       236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKIS---PQQVFGTGIAIAGV  288 (302)
T ss_pred             HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCc---hhHHHHHHHHHHHH
Confidence            455578899999999999889999999999999999988   65444444444444

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=92.51  E-value=0.52  Score=42.31  Aligned_cols=61  Identities=15%  Similarity=0.132  Sum_probs=51.5

Q ss_pred             hhhhhhHhhh----hhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361         73 ASGLDVGFSQ----WGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM  136 (223)
Q Consensus        73 ~~~~~i~l~N----~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l  136 (223)
                      ..++...+.|    .+++.++...+.+.-...|+++.++++++++|+++   +..++..+++++|+.+
T Consensus       281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt---~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVT---LLGYLGMAVAILGALL  345 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCc---hHhHHHHHHHHHHHHH
Confidence            3444445556    59999999999999999999999999999999999   8888888888888755

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.06  E-value=0.19  Score=38.04  Aligned_cols=70  Identities=21%  Similarity=0.100  Sum_probs=55.6

Q ss_pred             HHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHH-hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361         64 LHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMT-KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF  137 (223)
Q Consensus        64 ~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~-Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~  137 (223)
                      ++..+|+.+=.++++.+ +..+...++|...-+ .+++=+||++.++++++|..+   ++.++.+.+++.|+.+.
T Consensus        42 ~~y~ipf~lNq~GSv~f-~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~---~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQSGSVLF-FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVIS---RRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccc---hhHHHHHHHHHcCeeee
Confidence            45667776655555553 566777788877766 599999999999999999988   88899999999999874

Many members are annotated as potential transmembrane proteins.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=91.53  E-value=0.44  Score=41.60  Aligned_cols=64  Identities=14%  Similarity=0.053  Sum_probs=49.4

Q ss_pred             HHhhhhhhhHhhhhhhh-hhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhh----heecceeeeeee
Q psy14361         70 TGIASGLDVGFSQWGLR-SIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLY----GESNPGTSGLVM  136 (223)
Q Consensus        70 lsi~~~~~i~l~N~sl~-~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~----~~l~~i~~Gv~l  136 (223)
                      .|+.......+-..+++ +++++.+.++-...|+...+.++++.+|+.+   ++.+    +..+++.+|+.+
T Consensus       217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~---~~~~~~~~iG~~lIi~~~~l  285 (290)
T TIGR00776       217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKT---KREMIAISVGIILIIIAANI  285 (290)
T ss_pred             HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCC---cceeehhHHHHHHHHHHHHH
Confidence            66666666666667778 9999999999999999999999999999998   5443    445555555443

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=91.49  E-value=0.26  Score=35.77  Aligned_cols=54  Identities=19%  Similarity=0.181  Sum_probs=32.2

Q ss_pred             hhhhhhHhhhhhhhhhhHHHHH-HHhhhhHHHHHHHHHHhhccccchhhhhhhheecc
Q psy14361         73 ASGLDVGFSQWGLRSIAVSLYT-MTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNP  129 (223)
Q Consensus        73 ~~~~~i~l~N~sl~~vsvs~~q-m~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~  129 (223)
                      +++++..+-..+++.+|+|..- +-.+...+.+.+.+.++++|+.+   +.+.+.+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s---~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLS---LSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH-----------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHhheee
Confidence            7888889999999999999875 45678999999999999999999   777666544

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=91.35  E-value=4.2  Score=35.44  Aligned_cols=101  Identities=11%  Similarity=0.006  Sum_probs=73.7

Q ss_pred             HHHHHhhhhhhhHhhhhhhhhhhHHHHHHHh-hhhHHHHHHHHHHhhccccchhhhh-hhheecceeeeeeeeeecCccc
Q psy14361         67 IAPTGIASGLDVGFSQWGLRSIAVSLYTMTK-STSVVFILIFSLVFQLEKKSRKRLR-LYGESNPGTSGLVMFTYKATAF  144 (223)
Q Consensus        67 ~lplsi~~~~~i~l~N~sl~~vsvs~~qm~K-s~~pi~v~l~~~~~~~e~~s~~~~~-~~~~l~~i~~Gv~l~~~~e~~~  144 (223)
                      -+..|++.++.-.+...|++++.||-.-=+- ....+.+.++++++++|-.+..++. -.++++++++|+.+.++.|.+-
T Consensus        48 ~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~  127 (269)
T PF06800_consen   48 AFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS  127 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence            3447888888888999999998887655444 4455668889999999976622232 2568899999999998866422


Q ss_pred             --------cHHHHHHHHHHHHHHHHHHHHHH
Q psy14361        145 --------NWLGFSLVLLASFSSGLRWTLAQ  167 (223)
Q Consensus       145 --------~~~G~~l~l~s~~~~al~~v~~q  167 (223)
                              ...|+...++|.+.-..+.++.+
T Consensus       128 ~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~  158 (269)
T PF06800_consen  128 DKSSSKSNMKKGILALLISTIGYWIYSVIPK  158 (269)
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence                    25689999888887777666544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=87.63  E-value=0.67  Score=39.06  Aligned_cols=72  Identities=17%  Similarity=0.118  Sum_probs=59.1

Q ss_pred             HHHHHHHHhhhh-hhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee
Q psy14361         64 LHKIAPTGIASG-LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT  138 (223)
Q Consensus        64 ~~~~lplsi~~~-~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~  138 (223)
                      +......++... ....+-+.+++..+.+...+.-...|++.+++++++.+|+++   ....+...+++.|+.+..
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~---~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLS---PAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCc---HHHHHHHHHHHHHHHHHh
Confidence            444555666544 577888999999999999999999999999999999999999   877777777777776543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=82.91  E-value=2.4  Score=38.12  Aligned_cols=60  Identities=18%  Similarity=0.166  Sum_probs=50.5

Q ss_pred             hhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc
Q psy14361         80 FSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT  142 (223)
Q Consensus        80 l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~  142 (223)
                      +.+..+++-+..+..+-=.++.++.+++++++++++++   |..+++.++|++|+.+....|.
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~---~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFS---WLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCcccc---HHHHHHHHHHHHHhheEEccCC
Confidence            55667777777777777788899999999999999999   9888999999999998876654

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=82.71  E-value=1.8  Score=35.94  Aligned_cols=62  Identities=10%  Similarity=-0.105  Sum_probs=52.7

Q ss_pred             hhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361         72 IASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM  136 (223)
Q Consensus        72 i~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l  136 (223)
                      +..+..-.+-+..++|.+.....++-++.++++.++++++++++++   ...+++..++..|+.+
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls---~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKIS---STFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---HHHHHHHHHHHeeeEe
Confidence            3444555577888999999999999999999999999999999999   8888888888888754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=81.15  E-value=2.8  Score=36.50  Aligned_cols=70  Identities=19%  Similarity=0.084  Sum_probs=50.8

Q ss_pred             HHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhh-hhheecceeeee
Q psy14361         64 LHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLR-LYGESNPGTSGL  134 (223)
Q Consensus        64 ~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~-~~~~l~~i~~Gv  134 (223)
                      ++.++ -|+.++....+.-+|-+.+-+...-.+..+.++...+-+.+++||+-+++++. ..+.+.++++|.
T Consensus       196 ~~nil-~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~  266 (269)
T PF06800_consen  196 WKNIL-TGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA  266 (269)
T ss_pred             HHhhH-HHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence            34444 67778877777777878887777777777889999999999999998855554 345555555554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	223
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	5e-05

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 41.1 bits (95), Expect = 5e-05
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 11/34 (32%)

Query: 114 EKKS-RK---RLRLYG-ESNPGTSGLVMFTYKAT 142
           EK++ +K    L+LY  +S P    L +   KAT
Sbjct: 18  EKQALKKLQASLKLYADDSAP---ALAI---KAT 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.42
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.17

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.42  E-value=8.1e-05  Score=54.96  Aligned_cols=67  Identities=13%  Similarity=0.034  Sum_probs=59.9

Q ss_pred             HhhhhhhhHhhhhhhhhhhHHHHHHH-hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeec
Q psy14361         71 GIASGLDVGFSQWGLRSIAVSLYTMT-KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYK  140 (223)
Q Consensus        71 si~~~~~i~l~N~sl~~vsvs~~qm~-Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~  140 (223)
                      .+++.++..+-+.++++.|+|....+ .+..|+++.++++++++|+++   +.+.+.+.+|+.|+.+....
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s---~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD---LPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHHhcC
Confidence            34678888899999999999999888 999999999999999999999   88899999999999775443

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.17  E-value=9e-05  Score=56.99  Aligned_cols=65  Identities=14%  Similarity=0.045  Sum_probs=46.2

Q ss_pred             HhhhhhhhHhhhhhhhhhhHHHHHHH-hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee
Q psy14361         71 GIASGLDVGFSQWGLRSIAVSLYTMT-KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT  138 (223)
Q Consensus        71 si~~~~~i~l~N~sl~~vsvs~~qm~-Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~  138 (223)
                      .++++++..+-+.+++++|++....+ .+..|++++++++++++|+++   +..++.+++|++||.+..
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls---~~~~~Gi~LIi~GV~ll~  102 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD---LPAIIGMMLICAGVLIIN  102 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHHh
Confidence            33688888999999999999987777 999999999999999999999   888888888888876643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00