Psyllid ID: psy14376

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEEEEEEHHHHHEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHEHHHcHHHHHHHHHHHHHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSelkldaplFITWFQCVISAFLCIFLHIFslffpniltfptgnpfrlntLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFwlgvdqedlagsfsiSGTVYGVIASASLALYSihtkkvlpcvnNEIWLLSYYNNVYSSIILLFVSGlfgelktvqdYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKitsplthnisgTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Flexible Loop (DISEMBL)
MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRemeaqynnkysrv
Low Complexity Region (SEG)
MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Disordered region (IsUnstruct)
*****LVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ**************
Disordered Region (DISOPRED)
***********KITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY*******************
Disordered Region (DISEMBL)
MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Disordered Region (DISPRO)
****TLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREM***********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNKYSRV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
Q9VHT4	337	Probable GDP-fucose trans	yes	N/A	0.981	0.952	0.554	2e-98
Q8BLX4	363	GDP-fucose transporter 1	yes	N/A	0.969	0.873	0.534	9e-94
A7S1L6	339	GDP-fucose transporter 1	N/A	N/A	0.987	0.952	0.5	9e-89
A6QM03	364	GDP-fucose transporter 1	yes	N/A	0.987	0.887	0.521	2e-88
Q96A29	364	GDP-fucose transporter 1	yes	N/A	0.954	0.857	0.548	7e-88
Q968A5	363	GDP-fucose transporter OS	yes	N/A	0.941	0.848	0.525	1e-85
A9UUB8	333	GDP-fucose transporter 1	N/A	N/A	0.960	0.942	0.473	2e-81
Q550W6	368	GDP-fucose transporter 1	yes	N/A	0.831	0.739	0.405	1e-45
Q9UUI8	383	Uncharacterized transport	yes	N/A	0.905	0.772	0.296	7e-15
Q95YI5	373	UDP-sugar transporter UST	no	N/A	0.929	0.815	0.227	1e-06

>sp|Q9VHT4|FUCT1_DROME Probable GDP-fucose transporter OS=Drosophila melanogaster GN=Gfr PE=2 SV=1

 Score =  358 bits (920), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 179/323 (55%), Positives = 235/323 (72%), Gaps = 2/323 (0%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
              LV++Y+KI   VSLYW  SI+TVFVNK LLS   + L APLF++WFQCV+S  +C  
Sbjct: 8   HNRLVNKYLKIFFVVSLYWCTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICFV 67

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
               S  +P++ TFP GNP  ++T   +LPLS+L+  MI  NNL L  V V+FYYIGRSL
Sbjct: 68  ASRLSRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGANNLSLSYVTVAFYYIGRSL 127

Query: 121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
           TTVF+V+ +Y +L Q+TSF   +CCG IV+GFWLGVDQE L   FS  GT++GV++S +L
Sbjct: 128 TTVFSVVLTYVILRQRTSFKCLLCCGAIVVGFWLGVDQESLTEVFSWRGTIFGVLSSLAL 187

Query: 181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
           A++SI TKK L  VN E+WLLSYYNN+YS+++ L +  + GEL+++  Y  L  ++FW  
Sbjct: 188 AMFSIQTKKSLGYVNQEVWLLSYYNNLYSTLLFLPLIIINGELESIITYPHLWASWFWAA 247

Query: 241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
           + + GLCGFAIG+VT L+IK+TS LTHNISGTAKACAQTVIA+ +Y++V+  LWW SN V
Sbjct: 248 MTLSGLCGFAIGFVTALEIKVTSALTHNISGTAKACAQTVIATQYYHDVRSALWWTSNVV 307

Query: 301 VLFGSAAYTFVKQREMEAQYNNK 323
           VL  SAAYT VKQ EM  Q+  +
Sbjct: 308 VLVASAAYTRVKQLEMMRQHQQR 330

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.
Drosophila melanogaster (taxid: 7227)

>sp|Q8BLX4|FUCT1_MOUSE GDP-fucose transporter 1 OS=Mus musculus GN=Slc35c1 PE=2 SV=1

 Score =  343 bits (881), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 171/320 (53%), Positives = 235/320 (73%), Gaps = 3/320 (0%)

Query: 9   RYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIFLHIFSL 66
           R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC++++ LC  L   + 
Sbjct: 36  RALQIALVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTSLLCKGLSTLAT 95

Query: 67  FFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNV 126
             P ++ FPT N   L    +VLPLS++F+ MI+FNNLCLK VGV FY +GRSLTTVFNV
Sbjct: 96  CCPGMVDFPTLN-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVPFYNVGRSLTTVFNV 154

Query: 127 LFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIH 186
           L SY LL Q TSF A + CG+I+ GFWLG+DQE   G+ S++GT++GV+AS  ++L +I+
Sbjct: 155 LLSYLLLKQTTSFYALLTCGVIIGGFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIY 214

Query: 187 TKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL 246
           TKKVLP V++ IW L++YNNV + ++ L +  + GEL+ +  +  L++A+FWL + +GGL
Sbjct: 215 TKKVLPAVDHSIWRLTFYNNVNACVLFLPLMIVLGELRALLAFTHLSSAHFWLMMTLGGL 274

Query: 247 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSA 306
            GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E+K FLWW SN +VL GS+
Sbjct: 275 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSS 334

Query: 307 AYTFVKQREMEAQYNNKYSR 326
           AYT+V+  EM+    +  S+
Sbjct: 335 AYTWVRGWEMQKTQEDPSSK 354

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Mus musculus (taxid: 10090)

>sp|A7S1L6|FUCT1_NEMVE GDP-fucose transporter 1 OS=Nematostella vectensis GN=slc35c1 PE=3 SV=1

 Score =  327 bits (837), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 163/326 (50%), Positives = 231/326 (70%), Gaps = 3/326 (0%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLS--ELKLDAPLFITWFQCVISAFLCIF 60
           + +L+++ V+I   V+ YW +SI  VF+NK LLS  ++KLDAPLF+TW+QCV++     F
Sbjct: 2   KESLLAKSVRIAAVVAAYWTISISLVFLNKYLLSSPDIKLDAPLFVTWYQCVVTVICLFF 61

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
           L +    +P I TFP  +  +L+    VLPLS +F+ MI+FNNLCLKN+GVSFY +GRSL
Sbjct: 62  LSLLGDRYPWIDTFPAFH-IKLSVAKQVLPLSAVFVGMITFNNLCLKNLGVSFYNVGRSL 120

Query: 121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
           TTVFNV+ +Y +L Q TS+ A +CC +I+ GF +GVDQE  +G  S SG ++GV+AS  +
Sbjct: 121 TTVFNVICTYVILGQSTSYKAVICCAVIIGGFLMGVDQEGSSGKISYSGVLFGVLASLCV 180

Query: 181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
           +L +I+TKK +P V+N IW L  YNN  +  + L +  L GE+  V  + +L++AYFWL 
Sbjct: 181 SLNAIYTKKFIPAVDNNIWRLQLYNNFNACFLFLPLMALLGEIGEVAHFPNLSSAYFWLM 240

Query: 241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
           + IGG+ G AIGY+T LQIK+TSPLTHNISGTAKAC QT+++  +++E K  LWW+SN +
Sbjct: 241 MTIGGVFGIAIGYITGLQIKVTSPLTHNISGTAKACVQTIMSVSYFHETKTALWWLSNAM 300

Query: 301 VLFGSAAYTFVKQREMEAQYNNKYSR 326
           VL GS AYT V+  EM+  +  + S+
Sbjct: 301 VLGGSMAYTRVRHSEMKKAHTIQASK 326

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Nematostella vectensis (taxid: 45351)

>sp|A6QM03|FUCT1_BOVIN GDP-fucose transporter 1 OS=Bos taurus GN=SLC35C1 PE=2 SV=1

 Score =  325 bits (834), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 170/326 (52%), Positives = 227/326 (69%), Gaps = 3/326 (0%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
           E   V R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC+++  LC  
Sbjct: 31  EKPFVLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTVLLCKG 90

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
           L   +   P  + FP  +   L    +VLPLS++F+ MI+FNNLCLK VGV+FY +GRSL
Sbjct: 91  LSSLATCCPGTVDFPALH-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSL 149

Query: 121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
           TTVFNVL SY LL Q TSF A + C +I+ GFWLGVDQE   G+ S +GT++GV+AS  +
Sbjct: 150 TTVFNVLLSYLLLKQTTSFYALLTCSVIIGGFWLGVDQEGAEGTLSWTGTLFGVLASLCV 209

Query: 181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
           +L +I+TKKVLP V+  IW L++YNN  + ++ L +    GEL+ +  +  L +A+FW  
Sbjct: 210 SLNAIYTKKVLPAVDGSIWRLTFYNNANACVLFLPLLLALGELRALLAFPQLGSAHFWAM 269

Query: 241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
           + +GGL GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E K FLWW SN +
Sbjct: 270 MTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEAKSFLWWTSNMM 329

Query: 301 VLFGSAAYTFVKQREMEAQYNNKYSR 326
           VL GS+AYT+V+ REM+      + R
Sbjct: 330 VLGGSSAYTWVRGREMKKTQEEPHPR 355

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Bos taurus (taxid: 9913)

>sp|Q96A29|FUCT1_HUMAN GDP-fucose transporter 1 OS=Homo sapiens GN=SLC35C1 PE=1 SV=1

 Score =  324 bits (830), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 175/319 (54%), Positives = 231/319 (72%), Gaps = 7/319 (2%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
           E   + R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC+++  LC  
Sbjct: 31  EKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKG 90

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLI--NVLPLSILFMSMISFNNLCLKNVGVSFYYIGR 118
           L   +   P  + FP+    RL+  +  +VLPLS++F+ MI+FNNLCLK VGV+FY +GR
Sbjct: 91  LSALAACCPGAVDFPS---LRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 147

Query: 119 SLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASA 178
           SLTTVFNVL SY LL Q TSF A + CGII+ GFWLGVDQE   G+ S  GTV+GV+AS 
Sbjct: 148 SLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASL 207

Query: 179 SLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFW 238
            ++L +I+T KVLP V+  IW L++YNNV + I+ L +  L GEL+ ++D+A L +A+FW
Sbjct: 208 CVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFW 267

Query: 239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSN 298
             + +GGL GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E K FLWW SN
Sbjct: 268 GMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSN 327

Query: 299 WVVLFGSAAYTFVKQREME 317
            +VL GS+AYT+V+  EM+
Sbjct: 328 MMVLGGSSAYTWVRGWEMK 346

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Homo sapiens (taxid: 9606)

>sp|Q968A5|FUCT1_CAEEL GDP-fucose transporter OS=Caenorhabditis elegans GN=C50F4.14 PE=1 SV=1

 Score =  316 bits (810), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 163/310 (52%), Positives = 221/310 (71%), Gaps = 2/310 (0%)

Query: 10  YVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFP 69
           Y ++  AVS YW+ SI  VF+NK LLS ++LDAPLFITW+QC+++ FLC+FL   S  + 
Sbjct: 27  YKQVITAVSAYWVFSIGLVFLNKYLLSSVQLDAPLFITWYQCLVTVFLCLFLSKTSKAY- 85

Query: 70  NILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFS 129
            +  FP+  P        VLPLS++F++MISFNNLCLK VGVSFYY+GRSLTTVFNV+ +
Sbjct: 86  GLFKFPS-MPIDAKISREVLPLSVVFVAMISFNNLCLKYVGVSFYYVGRSLTTVFNVVCT 144

Query: 130 YFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKK 189
           Y +L QKTS  A  CC +I+ GF LGVDQE + G+ S +G ++GV+AS S+AL +I+T+K
Sbjct: 145 YLILGQKTSGQAIGCCALIIFGFLLGVDQEGVTGTLSYTGVIFGVLASLSVALNAIYTRK 204

Query: 190 VLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF 249
           VL  V + +W L+ YNN+ + ++ L +    GE   V  +  L    FW+ + +GG+ GF
Sbjct: 205 VLSSVGDCLWRLTMYNNLNALVLFLPLMLFNGEFGAVFYFDKLFDTTFWILMTLGGVFGF 264

Query: 250 AIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT 309
            +GYVT  QI+ TSPLTHNISGTAKA AQTV+A  WY+E+K  LWW SN+VVLFGS  YT
Sbjct: 265 MMGYVTGWQIQATSPLTHNISGTAKAAAQTVMAVVWYSELKTLLWWTSNFVVLFGSGMYT 324

Query: 310 FVKQREMEAQ 319
           +V++R M+ +
Sbjct: 325 YVQKRVMDKK 334

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Caenorhabditis elegans (taxid: 6239)

>sp|A9UUB8|FUCT1_MONBE GDP-fucose transporter 1 OS=Monosiga brevicollis GN=slc35c1 PE=3 SV=1

 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 149/315 (47%), Positives = 213/315 (67%), Gaps = 1/315 (0%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLH 62
           + TL+ R +KI   V+LYW+VSI  VF+NK LLSE+ LDAP+F+TWFQCV++   C  L 
Sbjct: 6   DATLLERSIKIAFVVALYWVVSISMVFLNKYLLSEVSLDAPMFVTWFQCVVAVVTCFILG 65

Query: 63  IFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTT 122
               + P +  FP    F  +  + VLPLS++F+ MI+FNNL LK VGV+FY +GRSLTT
Sbjct: 66  ELRSYHPALEMFPR-FAFDTHVAMKVLPLSLVFVGMIAFNNLALKFVGVAFYNVGRSLTT 124

Query: 123 VFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLAL 182
           +FNVL S+F+L Q+TS  A + CG+IV GF++GV++E      +++G +YGV+AS  +AL
Sbjct: 125 IFNVLLSFFMLQQRTSMPALLMCGVIVAGFFVGVNKEQEQADLTMAGIMYGVLASLCVAL 184

Query: 183 YSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLP 242
            +I+ KKV+P V+N++W L+ YNN+ +  + L V    GE+  +    D+ +  +W  + 
Sbjct: 185 NAIYIKKVMPFVDNDMWKLTAYNNMNAIFLFLPVITFMGEIPDIAASEDVYSGNYWFLMT 244

Query: 243 IGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVL 302
           + GL G AIG V+ LQI +TSPLTHNISGT+KACAQT++A    +E +   WW+ N  VL
Sbjct: 245 VAGLLGIAIGLVSMLQINVTSPLTHNISGTSKACAQTILALQLNDESRTATWWLGNVFVL 304

Query: 303 FGSAAYTFVKQREME 317
            GS  Y  VK+ EM+
Sbjct: 305 GGSLGYVLVKRAEMK 319

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Monosiga brevicollis (taxid: 81824)

>sp|Q550W6|FUCT1_DICDI GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/279 (40%), Positives = 168/279 (60%), Gaps = 7/279 (2%)

Query: 13  ITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHI-FSLFFPNI 71
           I   ++ Y+ +SI  VF+NK LLS+ K + PLFITW+Q +IS F+ I++    S   P  
Sbjct: 67  IASVIAFYFFISISLVFLNKILLSDFKFEYPLFITWYQQIIS-FVSIYIMTSISKSVPA- 124

Query: 72  LTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYF 131
           L+F     F+  T   VLP++ +   M+ FNNLCL+ V VSFY + RSLT  F+++ +Y 
Sbjct: 125 LSFLPEFEFKSATASKVLPVTAVLTGMVIFNNLCLEYVEVSFYQVARSLTICFSLILTYI 184

Query: 132 LLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKKVL 191
           +L  KTS+ A + C ++ +GF LG   E    +FS  G ++G+++S  +ALYSI  K+VL
Sbjct: 185 VLKSKTSYRATMACLVVFLGFVLGSAGE---VNFSWLGIIFGLLSSFFVALYSIAVKRVL 241

Query: 192 PCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAI 251
           P V+   W LS YN   S  ++  +  + GE  T+ D   L +  FW ++ + GL G+ I
Sbjct: 242 PAVDGNEWRLSIYNTAISIGLIFPLILVSGEANTILDEPLLYSGTFWFYMTVAGLMGYLI 301

Query: 252 GYVTTLQIKITSPLTHNISGTAKACAQTVIA-SYWYNEV 289
                +QIK TSPLT+ ISGT KAC QT++A  +W N +
Sbjct: 302 SISVFMQIKHTSPLTNTISGTVKACVQTILAVVFWGNPI 340

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9UUI8|YIY4_SCHPO Uncharacterized transporter C22F8.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22F8.04 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 21/317 (6%)

Query: 2   TEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFL 61
           +E   VSR + I  AVS   + +I+   +NK  L+   ++APL +  FQ    AF  + +
Sbjct: 79  SENAPVSR-LTIFFAVSSQIVFAILVTILNKQALN--IINAPLLMLSFQM---AFTSLMV 132

Query: 62  HIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLT 121
            ++  F  + + F T    RL + I +     + +  I     CL  V VSFY I R L 
Sbjct: 133 KMYWRF--SSVHFQT---LRLASAIQLKKFIFVKILGIVSKTYCLAFVPVSFYQISRGLL 187

Query: 122 TVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLA 181
             F +L S+ LL QKT       C ++++GF  GV  E         G + GV +S + A
Sbjct: 188 LPFTILLSFVLLKQKTRLFPFGGCLLVMLGFGFGVRFESHVAPI---GIILGVWSSFTTA 244

Query: 182 LYSIHTKKVL---PCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFW 238
           + S+  K  +   P ++  I++ S   +V+   +LL V+ L   L TVQ+   +    F+
Sbjct: 245 IESVAVKHYVHEYPTLD-LIYIFSALMSVFC--LLLSVASL-ELLHTVQEVVGMQAIKFF 300

Query: 239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSN 298
           + L +  L  F +   T  QIK+TSP+T+ IS +A++  QT++A  +  E          
Sbjct: 301 IVLILSSLSNFYLNIATFTQIKVTSPVTYMISVSARSILQTLLAVAFLGETLYGNRIYGV 360

Query: 299 WVVLFGSAAYTFVKQRE 315
            ++L G+  YT  K+ E
Sbjct: 361 ILILVGTLLYTLAKEHE 377

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q95YI5|US74C_DROME UDP-sugar transporter UST74c OS=Drosophila melanogaster GN=frc PE=1 SV=2

 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 12/316 (3%)

Query: 10  YVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFP 69
           +VK   +   Y L S +   VNK +L+     + LF++  Q   S  +        L   
Sbjct: 60  FVKKIGSALFYGLSSFMITVVNKTVLTSYHFPSFLFLSLGQLTASIVVLGMGKRLKL--- 116

Query: 70  NILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFS 129
             + FP   P + NT   + PL ++F+  + F     K + +  +   R  + +  +L  
Sbjct: 117 --VNFP---PLQRNTFAKIFPLPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLE 171

Query: 130 YFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKK 189
             +L  + S +  V    ++ G  L    +DL  SF++ G +Y +I +A  A   ++ KK
Sbjct: 172 LKILGLRPSNAVQVSVYAMIGGALLAA-SDDL--SFNMRGYIYVMITNALTASNGVYVKK 228

Query: 190 VLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF 249
            L       + L YYN+++  +  L ++ + G L    ++   N + F +   +  + GF
Sbjct: 229 KLDTSEIGKYGLMYYNSLFMFLPALALNYVTGNLDQALNFEQWNDSVFVVQFLLSCVMGF 288

Query: 250 AIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNE-VKPFLWWVSNWVVLFGSAAY 308
            + Y T L  +  S LT  I G  K    T +  +   + V  +L  +   + +  S  Y
Sbjct: 289 ILSYSTILCTQFNSALTTTIVGCLKNICVTYLGMFIGGDYVFSWLNCIGINISVLASLLY 348

Query: 309 TFVKQREMEAQYNNKY 324
           T+V  R   A     +
Sbjct: 349 TYVTFRRKRAPDKQDH 364

Involved in the import of UDP-sugars from the cytoplasm into the Golgi lumen.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
345493294	326	PREDICTED: probable GDP-fucose transport	0.984	0.987	0.595	1e-108
58383469	333	AGAP002393-PA [Anopheles gambiae str. PE	0.987	0.969	0.603	1e-106
321466053	334	hypothetical protein DAPPUDRAFT_321827 [	0.978	0.958	0.609	1e-105
157116197	335	GDP-fucose transporter, putative [Aedes	0.981	0.958	0.591	1e-104
350423987	334	PREDICTED: probable GDP-fucose transport	1.0	0.979	0.562	1e-104
340726394	335	PREDICTED: LOW QUALITY PROTEIN: probable	0.993	0.970	0.562	1e-103
170048126	335	GDP-fucose transporter [Culex quinquefas	0.972	0.949	0.603	1e-103
380024355	335	PREDICTED: probable GDP-fucose transport	0.993	0.970	0.559	1e-103
66555662	335	PREDICTED: probable GDP-fucose transport	0.993	0.970	0.553	1e-103
383847981	332	PREDICTED: probable GDP-fucose transport	0.981	0.966	0.560	1e-103

>gi|345493294|ref|XP_001605099.2| PREDICTED: probable GDP-fucose transporter-like [Nasonia vitripennis]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/324 (59%), Positives = 244/324 (75%), Gaps = 2/324 (0%)

Query: 6   LVSRYVKITLAVSLYWLVSIITVFVNKALLSELK--LDAPLFITWFQCVISAFLCIFLHI 63
           ++ +Y+ +   V+LYW+VSI+ VFVNKALLS  K  L+APLFITWFQCV S  +C+ L  
Sbjct: 1   MLHKYMYVAFVVALYWVVSILMVFVNKALLSSEKVHLNAPLFITWFQCVTSVGICVSLKA 60

Query: 64  FSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTV 123
           F+  FP    FP G PF  + +  VLPLSILF+ MI+ NNLCLK VGV+FYYIGRSLTTV
Sbjct: 61  FAKIFPQYFYFPKGTPFSWDVIRKVLPLSILFIGMIASNNLCLKYVGVAFYYIGRSLTTV 120

Query: 124 FNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALY 183
           FNV+F+Y +L +KTS     CC +I+ GFWLGVDQE++AGS SI+GT +GV+ S +L+LY
Sbjct: 121 FNVIFTYLILGEKTSSKTVTCCVVIIFGFWLGVDQENIAGSLSITGTFFGVLGSLTLSLY 180

Query: 184 SIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPI 243
           SIHTKKVLP VN EIWLLSYYNN+YS ++ L +  + GE  TV +Y  +    FW  + +
Sbjct: 181 SIHTKKVLPVVNQEIWLLSYYNNIYSVVLFLPLMLINGEFNTVYNYDKIGDLDFWSAMIV 240

Query: 244 GGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLF 303
           GGLCGFAIGYVT LQIK+TSPLTHNISGTAKAC QTV+A++WYNE KPFLWW+SN++VL 
Sbjct: 241 GGLCGFAIGYVTMLQIKVTSPLTHNISGTAKACVQTVLATHWYNESKPFLWWLSNFIVLL 300

Query: 304 GSAAYTFVKQREMEAQYNNKYSRV 327
            SAAY  +KQ  M+  +  + S +
Sbjct: 301 ASAAYARIKQLSMKQAFAKQVSVI 324

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|58383469|ref|XP_312562.2| AGAP002393-PA [Anopheles gambiae str. PEST] gi|55242389|gb|EAA08101.2| AGAP002393-PA [Anopheles gambiae str. PEST]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/323 (60%), Positives = 247/323 (76%)

Query: 1   MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIF 60
           + +  L ++Y++I + V+ YW++SI+TVFVNKALLS LKLDAPLF+TWFQ + S+ +C  
Sbjct: 5   LEKENLCTKYIRIAVVVAAYWVISILTVFVNKALLSGLKLDAPLFVTWFQVLTSSTICFT 64

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
           + + S  +P  ++FP GNPF   T   VLPLSILF +MI+ NNLCLK V V+FYY+GRSL
Sbjct: 65  MSMLSKRYPRAVSFPEGNPFDRETFRKVLPLSILFTAMIATNNLCLKYVSVAFYYVGRSL 124

Query: 121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
           TTVFNVL +Y LL QKTS  AC+CC +IV GFW+GVDQE L  SFS+ GTV+GV+ S SL
Sbjct: 125 TTVFNVLLTYALLGQKTSPKACLCCVMIVAGFWIGVDQESLTESFSLIGTVFGVLGSLSL 184

Query: 181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
           +LYSIHTK+ L  VN E+WLLSYYNNVYS+++ + +  + GE++ V +Y  L   +FW  
Sbjct: 185 SLYSIHTKRTLQHVNQEVWLLSYYNNVYSAVLFIPLMLINGEVQKVANYEHLFEGWFWGV 244

Query: 241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
           + IGG+CGFAIG+VTTLQIK+TSPLTHNISGTAKACAQTVIA+ WY E K FLWW SN V
Sbjct: 245 MTIGGVCGFAIGFVTTLQIKVTSPLTHNISGTAKACAQTVIATSWYQETKSFLWWTSNVV 304

Query: 301 VLFGSAAYTFVKQREMEAQYNNK 323
           VL GSA YT VKQ EM+  +  +
Sbjct: 305 VLLGSAFYTRVKQLEMDQTHREQ 327

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321466053|gb|EFX77051.1| hypothetical protein DAPPUDRAFT_321827 [Daphnia pulex]

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/325 (60%), Positives = 248/325 (76%), Gaps = 5/325 (1%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE----LKLDAPLFITWFQCVISAFLC 58
           E +L+ +Y+KI   VS YW VSI  VF+NKALLS       +DAPLF+TWFQCV++  LC
Sbjct: 7   EESLLKKYLKIFAVVSAYWAVSISLVFINKALLSGSTNGTTVDAPLFVTWFQCVVTVGLC 66

Query: 59  IFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGR 118
           +FL   + FFP++  FP      +  ++ VLPLS++F++MISFNNLCLK VGV+FYYIGR
Sbjct: 67  VFLACGAKFFPSLGKFPELG-LDVQIMLKVLPLSLVFVAMISFNNLCLKYVGVAFYYIGR 125

Query: 119 SLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASA 178
           SLTTVFNVL ++ LL ++TSFSA VCC IIV GFWLGVDQE +AGS SISGT+YGV+AS 
Sbjct: 126 SLTTVFNVLMTWVLLGERTSFSALVCCAIIVGGFWLGVDQEGVAGSLSISGTIYGVLASL 185

Query: 179 SLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFW 238
            ++L SI+TKKVLP V+  IWLL YYNN+ + ++ L +  L GEL T+  +       FW
Sbjct: 186 FVSLNSIYTKKVLPFVDQSIWLLGYYNNLNACLLFLPLMLLNGELPTLMSFQGYGNLTFW 245

Query: 239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSN 298
             +  GG+ GFAIGYVT LQI++TSPLTHNISGTAKACAQTV+A+YWY+EVKPFLWW+SN
Sbjct: 246 TMMVAGGVFGFAIGYVTGLQIQVTSPLTHNISGTAKACAQTVLATYWYSEVKPFLWWISN 305

Query: 299 WVVLFGSAAYTFVKQREMEAQYNNK 323
           WVVLFGSAAYT V+Q+EME  +  K
Sbjct: 306 WVVLFGSAAYTRVRQQEMERNHKAK 330

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157116197|ref|XP_001652791.1| GDP-fucose transporter, putative [Aedes aegypti] gi|108876579|gb|EAT40804.1| AAEL007481-PA [Aedes aegypti]

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/321 (59%), Positives = 246/321 (76%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLH 62
           +G L+++Y++I   V+ YW+VSI+TVFVNKALLS+L LDAPLF+TWFQ + S+ +C  + 
Sbjct: 9   KGNLLTKYLRILAVVAAYWVVSILTVFVNKALLSDLDLDAPLFVTWFQVLTSSSICFVMS 68

Query: 63  IFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTT 122
             S  +P +   PTGNP   + L  VLPLS+LF +MI+ NNLCLK V V+FYY+GRSLTT
Sbjct: 69  ALSRRYPRVFNVPTGNPLDRDVLRKVLPLSLLFTAMIATNNLCLKYVEVAFYYVGRSLTT 128

Query: 123 VFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLAL 182
           VFNV+ +Y LL QKTS  A +CC +IV+GFW+GVDQE L  SFS+ GT++GV+ S SL+L
Sbjct: 129 VFNVVLTYLLLGQKTSGKAVLCCMLIVIGFWIGVDQESLTESFSLIGTIFGVLGSLSLSL 188

Query: 183 YSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLP 242
           YSI+TK+ L  VN E+WLLSYYNNVYS++I + +  + GE + V DY  L   +FW  + 
Sbjct: 189 YSIYTKRTLQFVNQEVWLLSYYNNVYSAVIFIPLMLINGEFRVVMDYEHLAEPWFWGVMT 248

Query: 243 IGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVL 302
           +GGLCGFAIG+VT LQIK+TSPLTHNISGTAKACAQTV+A+ W++EVK FLWW SN VVL
Sbjct: 249 VGGLCGFAIGFVTALQIKVTSPLTHNISGTAKACAQTVLATTWFSEVKSFLWWTSNLVVL 308

Query: 303 FGSAAYTFVKQREMEAQYNNK 323
            GSA YT VKQ EM+ ++  +
Sbjct: 309 IGSALYTRVKQLEMDQRHRQQ 329

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423987|ref|XP_003493654.1| PREDICTED: probable GDP-fucose transporter-like [Bombus impatiens]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/329 (56%), Positives = 245/329 (74%), Gaps = 2/329 (0%)

Query: 1   MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLC 58
           M E  L+++++ I + V+ YW++SI+TVF+NK LLS   + LDAPLFITW QC++S  +C
Sbjct: 1   MLETGLLTKFIYIAIVVTNYWIISILTVFINKTLLSSNTINLDAPLFITWCQCIVSLVMC 60

Query: 59  IFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGR 118
           + L   S +FP  + FP GNP+   TL  VLPLS+LF  MI+ NNLCLK V VSFYY GR
Sbjct: 61  VILSNLSKWFPKYIKFPIGNPYTKETLRKVLPLSLLFTGMIATNNLCLKYVDVSFYYTGR 120

Query: 119 SLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASA 178
           SLTTVFNV+F+Y +L QKTS +   CC  IV+GFWLGVDQE +AGS SI GT++GV+ S 
Sbjct: 121 SLTTVFNVIFTYLMLGQKTSINCIACCAFIVIGFWLGVDQEHIAGSLSILGTIFGVLGSL 180

Query: 179 SLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFW 238
           +L+LYSIH K+VLP +N +IWLLSY NN YS II L +    GE  TV +Y  + ++YFW
Sbjct: 181 TLSLYSIHMKQVLPALNQDIWLLSYCNNAYSVIIFLPLMLANGEHVTVYNYDKIGSSYFW 240

Query: 239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSN 298
           L + +GG+CGFAIG+ T LQIK+TSPLTHNISGTAKACAQTV+A+YW++E K F+WW+SN
Sbjct: 241 LAMVVGGICGFAIGFATALQIKVTSPLTHNISGTAKACAQTVLATYWFDEKKSFMWWISN 300

Query: 299 WVVLFGSAAYTFVKQREMEAQYNNKYSRV 327
           +VVL  SA Y  ++Q ++  +Y  +  ++
Sbjct: 301 FVVLSASAMYARLRQLDISREYKEEKQQL 329

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726394|ref|XP_003401544.1| PREDICTED: LOW QUALITY PROTEIN: probable GDP-fucose transporter-like [Bombus terrestris]

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/327 (56%), Positives = 244/327 (74%), Gaps = 2/327 (0%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
           E  L+++++ I + V+ YW++SI+TVF+NK LLS   + LDAPLFITW QC++S  +C+ 
Sbjct: 4   ETGLLTKFIYIAIVVTNYWIISILTVFINKTLLSSNTINLDAPLFITWCQCIVSLVMCVI 63

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
           L   S +FP  + FP GNP+   TL  VLPLS+LF  MI+ NNLCLK V VSFYY GRSL
Sbjct: 64  LSNLSKWFPKYIKFPIGNPYTKETLRKVLPLSLLFTGMIATNNLCLKYVDVSFYYTGRSL 123

Query: 121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
           TTVFNV+F+Y +L QKTS +   CC  IV+GFWLGVDQE +AGS SI GT++GV+ S +L
Sbjct: 124 TTVFNVIFTYLMLGQKTSINCIACCAFIVIGFWLGVDQEHIAGSLSILGTIFGVLGSLTL 183

Query: 181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
           +LYSIH K+VLP +N +IWLLSY NN YS II L +    GE  TV +Y  + ++YFWL 
Sbjct: 184 SLYSIHMKQVLPTLNQDIWLLSYCNNAYSVIIFLPLMLANGEHITVYNYDKIGSSYFWLA 243

Query: 241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
           + +GG+CGFAIG+ T LQIK+TSPLTHNISGTAKACAQTV+A+YW++E K F+WW+SN+V
Sbjct: 244 MIVGGICGFAIGFATALQIKVTSPLTHNISGTAKACAQTVLATYWFDEKKSFMWWISNFV 303

Query: 301 VLFGSAAYTFVKQREMEAQYNNKYSRV 327
           VL  SA Y  ++Q ++  +Y  +  ++
Sbjct: 304 VLSASAMYARLRQLDISREYKEEKQQL 330

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170048126|ref|XP_001851547.1| GDP-fucose transporter [Culex quinquefasciatus] gi|167870303|gb|EDS33686.1| GDP-fucose transporter [Culex quinquefasciatus]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/318 (60%), Positives = 241/318 (75%)

Query: 6   LVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFS 65
           L+S+Y++I   V+ YW +SI+TVFVNKALLS L LDAPLF+TWFQ ++S+ +C  +   S
Sbjct: 12  LLSKYLRILTVVAAYWTISILTVFVNKALLSGLNLDAPLFVTWFQVLVSSSICFVMSSLS 71

Query: 66  LFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFN 125
             +P  +T P+GNP    T + V+PLSILF +MI+ NNLCLK VGV+FYY+GRSLTTVFN
Sbjct: 72  KRYPRFVTVPSGNPLDKETFLKVIPLSILFTAMIATNNLCLKYVGVAFYYVGRSLTTVFN 131

Query: 126 VLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSI 185
           V+ +Y LL QKTS  A  CC +IV GFW+GVDQE L  SFS+ GT++GV+ S SL+LYSI
Sbjct: 132 VILTYLLLGQKTSGQAVGCCLLIVAGFWIGVDQESLTDSFSLIGTIFGVLGSLSLSLYSI 191

Query: 186 HTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG 245
           +TK+ L  VN E+WLLSYYNNVYS+II + +  + GEL  V +Y +L   +FW  + +GG
Sbjct: 192 YTKRTLQHVNQEVWLLSYYNNVYSAIIFIPLMLINGELSVVLNYKNLGEPWFWGVMTVGG 251

Query: 246 LCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGS 305
            CGFAIGYVT LQIK+TSPLTHNISGTAKACAQTVIA+ WYNE K  LWW SN VVL GS
Sbjct: 252 FCGFAIGYVTALQIKVTSPLTHNISGTAKACAQTVIATSWYNEAKSLLWWTSNVVVLVGS 311

Query: 306 AAYTFVKQREMEAQYNNK 323
           A YT VKQ EM+ ++  +
Sbjct: 312 ALYTRVKQLEMDQRHREQ 329

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024355|ref|XP_003695966.1| PREDICTED: probable GDP-fucose transporter-like [Apis florea]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/327 (55%), Positives = 246/327 (75%), Gaps = 2/327 (0%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
           E  ++S+++ I + V+ YW++SI+TVF+NK LLS   + LDAPLFITW QC+IS  +C+ 
Sbjct: 4   ETGILSKFLYIAIVVATYWIISILTVFINKILLSSHTINLDAPLFITWCQCIISLNICVI 63

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
           L   S +FP  + F +GNP+    L  + PLS+LF+ MI+ NNLCLK V V+FYYIGRSL
Sbjct: 64  LSNLSKWFPRYIKFSSGNPYTKEILKKIFPLSLLFIGMIATNNLCLKYVDVAFYYIGRSL 123

Query: 121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
           TTVFNV+F+YF+L +KTS +  VCC  IV+GFWLGVDQE +AGS SI GT++GV+ S +L
Sbjct: 124 TTVFNVIFTYFMLGKKTSINCIVCCAFIVIGFWLGVDQEHIAGSLSILGTIFGVLGSLTL 183

Query: 181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
           +LYSIH K+VLP +N +IWLLSYYNN YS II L +  + GE  TV +Y  + + YFWL 
Sbjct: 184 SLYSIHVKQVLPKLNQDIWLLSYYNNAYSIIIFLPLMIVNGEHITVYNYDKIGSFYFWLV 243

Query: 241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
           + IGG+CGFAIGY T LQIK+TSPLTHNISGTAKAC QT++A+YW+NE K F+WW+SN++
Sbjct: 244 MIIGGICGFAIGYATALQIKVTSPLTHNISGTAKACVQTILATYWFNEEKSFMWWISNFI 303

Query: 301 VLFGSAAYTFVKQREMEAQYNNKYSRV 327
           VL  SA Y  ++Q ++  +Y  +  ++
Sbjct: 304 VLSASAMYAKLRQVDLSKKYKEEKQQL 330

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66555662|ref|XP_623632.1| PREDICTED: probable GDP-fucose transporter [Apis mellifera]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 181/327 (55%), Positives = 246/327 (75%), Gaps = 2/327 (0%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
           E  ++S+++ I + V+ YW++SI+T+F+NK LLS   + LDAPLFITW QC+IS  +C+ 
Sbjct: 4   ETGILSKFLYIAIVVATYWIISILTIFINKVLLSSHTINLDAPLFITWCQCIISLNICVI 63

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
           L   S +FP  + FP GNP+   T+  +LPLS+LF+ MI+ NNLCLK V V+FYYIGRSL
Sbjct: 64  LSNLSKWFPRYIKFPNGNPYTKETVKKILPLSLLFIGMIATNNLCLKYVDVAFYYIGRSL 123

Query: 121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
           TTVFNV+F+YF+L QKTS +   CC  I++GFWLGVDQE +AGS S+ GT++GV+ S +L
Sbjct: 124 TTVFNVIFTYFMLGQKTSTNCIACCAFIIIGFWLGVDQEHVAGSLSVLGTIFGVLGSLTL 183

Query: 181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
           +LYSIH K+VLP +N +IWLLSY NN YS II L +  + GE  TV +Y  + + YFWL 
Sbjct: 184 SLYSIHMKQVLPTLNQDIWLLSYCNNAYSIIIFLPLIIVNGEHITVYNYDKIGSFYFWLV 243

Query: 241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
           + IGG+CGFAIGY T LQIK+TSPLTHNISGTAKAC QT++A+YW+NE K F+WW+SN++
Sbjct: 244 MIIGGICGFAIGYATALQIKVTSPLTHNISGTAKACVQTILATYWFNEEKSFMWWISNFI 303

Query: 301 VLFGSAAYTFVKQREMEAQYNNKYSRV 327
           VL  SA Y  ++Q ++  +Y  +  ++
Sbjct: 304 VLSASAMYAKLRQLDLSKKYKEEKQQL 330

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847981|ref|XP_003699631.1| PREDICTED: probable GDP-fucose transporter-like [Megachile rotundata]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 181/323 (56%), Positives = 238/323 (73%), Gaps = 2/323 (0%)

Query: 3   EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
           E  ++ +++ IT+ V  YW++SI+TVF+NKALLS   + LDAPLF+TW QC++S  +C  
Sbjct: 4   EIGILPKFIHITIVVVAYWIISILTVFINKALLSSNSINLDAPLFVTWCQCIVSLIICAS 63

Query: 61  LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
           L   S  FP  + FP GNP+   TL  +LPLS+LF  MI+ NNLCLK VG++FYY+GRSL
Sbjct: 64  LSKLSKEFPEYIKFPDGNPYTKETLSKILPLSLLFTGMIATNNLCLKYVGIAFYYVGRSL 123

Query: 121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
           TTVFNV+F+Y +L Q+TS     CC  IV GFWLGVDQE +AGS S+ GT++G++ S  L
Sbjct: 124 TTVFNVIFTYLILGQRTSIKCIACCTFIVTGFWLGVDQEHIAGSLSVLGTIFGILGSLML 183

Query: 181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
           +LYSIH K+VLP VN +IWLLSYYNN YS II L +    GE  TV +Y  + + +FW  
Sbjct: 184 SLYSIHMKQVLPAVNQDIWLLSYYNNAYSVIIFLPLMVANGEHITVYNYDKIGSLFFWSA 243

Query: 241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
           + +GG+CGFAIGYVT LQIK+TSPLTHNISGTAKACAQTV+A+YW+NE K F+WW+SN++
Sbjct: 244 MIVGGICGFAIGYVTALQIKVTSPLTHNISGTAKACAQTVLATYWFNEEKSFMWWMSNFI 303

Query: 301 VLFGSAAYTFVKQREMEAQYNNK 323
           VL  SA Y   +Q ++  +Y  +
Sbjct: 304 VLGASAMYARFRQLDLSKEYREE 326

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
UNIPROTKB|J9NWS1	351	SLC35C1 "Uncharacterized prote	0.954	0.888	0.551	6.5e-90
RGD|1309463	404	Slc35c1 "solute carrier family	0.969	0.784	0.537	8.3e-90
MGI|MGI:2443301	363	Slc35c1 "solute carrier family	0.969	0.873	0.534	1.1e-89
UNIPROTKB|B2RDB2	351	SLC35C1 "cDNA, FLJ96534, highl	0.954	0.888	0.548	4.1e-88
UNIPROTKB|Q96A29	364	SLC35C1 "GDP-fucose transporte	0.954	0.857	0.548	4.1e-88
UNIPROTKB|F1SHJ7	371	FUCT1 "Uncharacterized protein	0.966	0.851	0.545	5.3e-88
ZFIN|ZDB-GENE-041212-11	348	slc35c1 "solute carrier family	0.938	0.882	0.554	6e-87
UNIPROTKB|A6QM03	364	SLC35C1 "GDP-fucose transporte	0.987	0.887	0.521	7.7e-87
WB|WBGene00008237	363	nstp-10 [Caenorhabditis elegan	0.932	0.840	0.533	5.6e-84
UNIPROTKB|E1BV92	365	SLC35C1 "Uncharacterized prote	0.944	0.846	0.528	2.2e-82

UNIPROTKB|J9NWS1 SLC35C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
 Identities = 176/319 (55%), Positives = 235/319 (73%)

Query:     3 EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
             E   + R ++ITL VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC+++  LC  
Sbjct:    18 EKPFLLRALQITLVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTTLLCKS 77

Query:    61 LHIFSLFFPNILTFPTGNPFRLNTLI--NVLPLSILFMSMISFNNLCLKNVGVSFYYIGR 118
             L   + F P  + FPT    RL+  +  +VLPLS++F+ MI+FNNLCLK VGV+FY +GR
Sbjct:    78 LSTLAAFCPGAMDFPT---LRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 134

Query:   119 SLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASA 178
             SLTTVFNVL SY LL Q TSF A + CGII+ GFWLGVDQE   G+ S +GT++GV+AS 
Sbjct:   135 SLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWTGTLFGVLASL 194

Query:   179 SLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFW 238
              ++L +I+TKKVLP V+  IW L++YNNV + ++ L +  L GEL+T+ +++ L +A+FW
Sbjct:   195 CVSLNAIYTKKVLPAVDGSIWRLTFYNNVNACVLFLPLLLLLGELQTLLNFSQLGSAHFW 254

Query:   239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSN 298
               + +GGL GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E K FLWW SN
Sbjct:   255 GMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSN 314

Query:   299 WVVLFGSAAYTFVKQREME 317
              +VL GS+AYT+V+  EM+
Sbjct:   315 MMVLGGSSAYTWVRGWEMK 333

GO:0016021 "integral to membrane" evidence=IEA

RGD|1309463 Slc35c1 "solute carrier family 35, member C1" [Rattus norvegicus (taxid:10116)]

 Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
 Identities = 172/320 (53%), Positives = 235/320 (73%)

Query:     9 RYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIFLHIFSL 66
             R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC++++ LC  L   + 
Sbjct:    77 RALQIALVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTSLLCKGLSTLAT 136

Query:    67 FFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNV 126
               P ++ FPT N   L    +VLPLS++F+ MI+FNNLCLK VGV+FY +GRSLTTVFNV
Sbjct:   137 CCPGMVDFPTLN-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNV 195

Query:   127 LFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIH 186
             L SY LL Q TSF A + C II+ GFWLG+DQE   G+ S++GT++GV+AS  ++L +I+
Sbjct:   196 LLSYLLLKQTTSFYALLTCAIIIGGFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIY 255

Query:   187 TKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL 246
             TKKVLP V++ IW L++YNNV + ++ L +  + GEL  +  +A LN+A+FW+ + +GGL
Sbjct:   256 TKKVLPAVDHSIWRLTFYNNVNACVLFLPLMVVLGELHALLAFAHLNSAHFWVMMTLGGL 315

Query:   247 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSA 306
              GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E+K FLWW SN +VL GS+
Sbjct:   316 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSS 375

Query:   307 AYTFVKQREMEAQYNNKYSR 326
             AYT+V+  EM+    +  S+
Sbjct:   376 AYTWVRGWEMQKTQEDPSSK 395

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=ISO

GO:0045746 "negative regulation of Notch signaling pathway" evidence=ISO

GO:2000460 "regulation of eukaryotic cell surface binding" evidence=ISO

MGI|MGI:2443301 Slc35c1 "solute carrier family 35, member C1" [Mus musculus (taxid:10090)]

 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 171/320 (53%), Positives = 235/320 (73%)

Query:     9 RYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIFLHIFSL 66
             R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC++++ LC  L   + 
Sbjct:    36 RALQIALVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTSLLCKGLSTLAT 95

Query:    67 FFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNV 126
               P ++ FPT N   L    +VLPLS++F+ MI+FNNLCLK VGV FY +GRSLTTVFNV
Sbjct:    96 CCPGMVDFPTLN-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVPFYNVGRSLTTVFNV 154

Query:   127 LFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIH 186
             L SY LL Q TSF A + CG+I+ GFWLG+DQE   G+ S++GT++GV+AS  ++L +I+
Sbjct:   155 LLSYLLLKQTTSFYALLTCGVIIGGFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIY 214

Query:   187 TKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL 246
             TKKVLP V++ IW L++YNNV + ++ L +  + GEL+ +  +  L++A+FWL + +GGL
Sbjct:   215 TKKVLPAVDHSIWRLTFYNNVNACVLFLPLMIVLGELRALLAFTHLSSAHFWLMMTLGGL 274

Query:   247 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSA 306
              GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E+K FLWW SN +VL GS+
Sbjct:   275 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSS 334

Query:   307 AYTFVKQREMEAQYNNKYSR 326
             AYT+V+  EM+    +  S+
Sbjct:   335 AYTWVRGWEMQKTQEDPSSK 354

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IMP

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IMP

GO:2000460 "regulation of eukaryotic cell surface binding" evidence=IMP

UNIPROTKB|B2RDB2 SLC35C1 "cDNA, FLJ96534, highly similar to Homo sapiens GDP-fucose transporter 1, mRNA" [Homo sapiens (taxid:9606)]

 Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
 Identities = 175/319 (54%), Positives = 231/319 (72%)

Query:     3 EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
             E   + R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC+++  LC  
Sbjct:    18 EKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKG 77

Query:    61 LHIFSLFFPNILTFPTGNPFRLNTLI--NVLPLSILFMSMISFNNLCLKNVGVSFYYIGR 118
             L   +   P  + FP+    RL+  +  +VLPLS++F+ MI+FNNLCLK VGV+FY +GR
Sbjct:    78 LSALAACCPGAVDFPS---LRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 134

Query:   119 SLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASA 178
             SLTTVFNVL SY LL Q TSF A + CGII+ GFWLGVDQE   G+ S  GTV+GV+AS 
Sbjct:   135 SLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASL 194

Query:   179 SLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFW 238
              ++L +I+T KVLP V+  IW L++YNNV + I+ L +  L GEL+ ++D+A L +A+FW
Sbjct:   195 CVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFW 254

Query:   239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSN 298
               + +GGL GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E K FLWW SN
Sbjct:   255 GMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSN 314

Query:   299 WVVLFGSAAYTFVKQREME 317
              +VL GS+AYT+V+  EM+
Sbjct:   315 MMVLGGSSAYTWVRGWEMK 333

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|Q96A29 SLC35C1 "GDP-fucose transporter 1" [Homo sapiens (taxid:9606)]

 Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
 Identities = 175/319 (54%), Positives = 231/319 (72%)

Query:     3 EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
             E   + R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC+++  LC  
Sbjct:    31 EKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKG 90

Query:    61 LHIFSLFFPNILTFPTGNPFRLNTLI--NVLPLSILFMSMISFNNLCLKNVGVSFYYIGR 118
             L   +   P  + FP+    RL+  +  +VLPLS++F+ MI+FNNLCLK VGV+FY +GR
Sbjct:    91 LSALAACCPGAVDFPS---LRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 147

Query:   119 SLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASA 178
             SLTTVFNVL SY LL Q TSF A + CGII+ GFWLGVDQE   G+ S  GTV+GV+AS 
Sbjct:   148 SLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASL 207

Query:   179 SLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFW 238
              ++L +I+T KVLP V+  IW L++YNNV + I+ L +  L GEL+ ++D+A L +A+FW
Sbjct:   208 CVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFW 267

Query:   239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSN 298
               + +GGL GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E K FLWW SN
Sbjct:   268 GMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSN 327

Query:   299 WVVLFGSAAYTFVKQREME 317
              +VL GS+AYT+V+  EM+
Sbjct:   328 MMVLGGSSAYTWVRGWEMK 346

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|F1SHJ7 FUCT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 174/319 (54%), Positives = 229/319 (71%)

Query:     3 EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
             E   V R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC+++A LC  
Sbjct:    39 EKPFVLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTALLCKG 98

Query:    61 LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
             L   +  +P  + FPT +   L    ++LPLS++F+ MI+FNNLCLK VGV+FY +GRSL
Sbjct:    99 LSTLATCWPGAVDFPTLH-LDLRVARSILPLSVVFIGMITFNNLCLKYVGVAFYNVGRSL 157

Query:   121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
             TTVFNVL SY LL Q TSF A + CG I+ GFWLGVDQE   G+ S +GTV+GV+AS  +
Sbjct:   158 TTVFNVLLSYLLLKQTTSFYALLTCGTIIGGFWLGVDQEGAEGTLSWTGTVFGVLASLCV 217

Query:   181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
             +L +I+TKKVLP V+  IW L++YNNV + I+ L +  L GEL+ +  +  L +A+FW  
Sbjct:   218 SLNAIYTKKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELRALHHFPLLTSAHFWGM 277

Query:   241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
             + +GGL GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y + K FLWW SN +
Sbjct:   278 MTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEDTKSFLWWASNMM 337

Query:   301 VLFGSAAYTFVKQREMEAQ 319
             VL GS AYT+V+  EM+ Q
Sbjct:   338 VLGGSFAYTWVRGWEMKTQ 356

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-041212-11 slc35c1 "solute carrier family 35, member C1" [Danio rerio (taxid:7955)]

 Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
 Identities = 172/310 (55%), Positives = 225/310 (72%)

Query:     9 RYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFF 68
             R  KI L V+LYW +SI  VF+N  LL   +LDAP+FIT+FQCV+S  LC+ +   S   
Sbjct:    19 RATKIALVVTLYWFISISMVFLNNYLLDSKELDAPVFITFFQCVVSVGLCLLMSFLSSLC 78

Query:    69 PNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLF 128
             P  + FP+   F L     +LPL+I+F+SMI+FNNLCLK VGV+FY +GRSL+TVFNV+ 
Sbjct:    79 PGSVDFPSLK-FDLRVSREILPLTIVFISMITFNNLCLKYVGVAFYTVGRSLSTVFNVIL 137

Query:   129 SYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTK 188
             SY +L Q TS  A +CCG+I+ GFWLGVDQE +AGS S +G V+GVIAS  ++L +I TK
Sbjct:   138 SYVVLKQTTSLYAVLCCGVILGGFWLGVDQEAVAGSLSWAGVVFGVIASLCVSLNAIFTK 197

Query:   189 KVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG 248
             KVLP V+  IW LSYYNN+ + ++ L +  + GE+K+V +++ L   +FW  + +GG+ G
Sbjct:   198 KVLPVVDGNIWKLSYYNNLNAIVLFLPLLIILGEVKSVFEFSRLTDLHFWGMMTLGGVFG 257

Query:   249 FAIGYVTTLQIKITSPLTHNISGTAKACAQTVIAS-YWYNEVKPFLWWVSNWVVLFGSAA 307
             FAIGYVT LQIK TSPLTHN+SGTAK+CAQTV+A  YW +E K  LWW SN +VL GS A
Sbjct:   258 FAIGYVTGLQIKFTSPLTHNVSGTAKSCAQTVLAVVYWASE-KSTLWWTSNLMVLGGSFA 316

Query:   308 YTFVKQREME 317
             YT+VK  EM+
Sbjct:   317 YTWVKGMEMK 326

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A6QM03 SLC35C1 "GDP-fucose transporter 1" [Bos taurus (taxid:9913)]

 Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
 Identities = 170/326 (52%), Positives = 227/326 (69%)

Query:     3 EGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIF 60
             E   V R ++I L VSLYW+ SI  VF+NK LL    L+LD P+F+T++QC+++  LC  
Sbjct:    31 EKPFVLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTVLLCKG 90

Query:    61 LHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSL 120
             L   +   P  + FP  +   L    +VLPLS++F+ MI+FNNLCLK VGV+FY +GRSL
Sbjct:    91 LSSLATCCPGTVDFPALH-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSL 149

Query:   121 TTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASL 180
             TTVFNVL SY LL Q TSF A + C +I+ GFWLGVDQE   G+ S +GT++GV+AS  +
Sbjct:   150 TTVFNVLLSYLLLKQTTSFYALLTCSVIIGGFWLGVDQEGAEGTLSWTGTLFGVLASLCV 209

Query:   181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF 240
             +L +I+TKKVLP V+  IW L++YNN  + ++ L +    GEL+ +  +  L +A+FW  
Sbjct:   210 SLNAIYTKKVLPAVDGSIWRLTFYNNANACVLFLPLLLALGELRALLAFPQLGSAHFWAM 269

Query:   241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV 300
             + +GGL GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  +Y E K FLWW SN +
Sbjct:   270 MTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEAKSFLWWTSNMM 329

Query:   301 VLFGSAAYTFVKQREMEAQYNNKYSR 326
             VL GS+AYT+V+ REM+      + R
Sbjct:   330 VLGGSSAYTWVRGREMKKTQEEPHPR 355

GO:0000139 "Golgi membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

WB|WBGene00008237 nstp-10 [Caenorhabditis elegans (taxid:6239)]

 Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
 Identities = 165/309 (53%), Positives = 222/309 (71%)

Query:    10 YVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFP 69
             Y ++  AVS YW+ SI  VF+NK LLS ++LDAPLFITW+QC+++ FLC+FL   S  + 
Sbjct:    27 YKQVITAVSAYWVFSIGLVFLNKYLLSSVQLDAPLFITWYQCLVTVFLCLFLSKTSKAY- 85

Query:    70 NILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFS 129
              +  FP+  P        VLPLS++F++MISFNNLCLK VGVSFYY+GRSLTTVFNV+ +
Sbjct:    86 GLFKFPS-MPIDAKISREVLPLSVVFVAMISFNNLCLKYVGVSFYYVGRSLTTVFNVVCT 144

Query:   130 YFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTKK 189
             Y +L QKTS  A  CC +I+ GF LGVDQE + G+ S +G ++GV+AS S+AL +I+T+K
Sbjct:   145 YLILGQKTSGQAIGCCALIIFGFLLGVDQEGVTGTLSYTGVIFGVLASLSVALNAIYTRK 204

Query:   190 VLPCVNNEIWLLSYYNNVYSSIILLFVSGLF-GELKTVQDYADLNTAYFWLFLPIGGLCG 248
             VL  V + +W L+ YNN+ ++++L     LF GE   V  +  L    FW+ + +GG+ G
Sbjct:   205 VLSSVGDCLWRLTMYNNL-NALVLFLPLMLFNGEFGAVFYFDKLFDTTFWILMTLGGVFG 263

Query:   249 FAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY 308
             F +GYVT  QI+ TSPLTHNISGTAKA AQTV+A  WY+E+K  LWW SN+VVLFGS  Y
Sbjct:   264 FMMGYVTGWQIQATSPLTHNISGTAKAAAQTVMAVVWYSELKTLLWWTSNFVVLFGSGMY 323

Query:   309 TFVKQREME 317
             T+V++R M+
Sbjct:   324 TYVQKRVMD 332

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BV92 SLC35C1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 168/318 (52%), Positives = 224/318 (70%)

Query:     7 VSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIFLHIF 64
             V R ++I L VSLYW VSI  VF+NK LL    L+LDAPLF+T+FQC ++A LC+ L + 
Sbjct:    37 VLRALRIALVVSLYWFVSITMVFLNKYLLDSPSLRLDAPLFVTFFQCAVTAALCLGLSLG 96

Query:    65 SLFFPNILTFPTGNPFRLNTLIN--VLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTT 122
             +   P     P     RL+  ++  VLPLS++F+ M++ NNLCLK+VGV+FY +GRSLTT
Sbjct:    97 AACGP-CAALPA---LRLDLKVSRSVLPLSVVFIGMVTSNNLCLKHVGVAFYNVGRSLTT 152

Query:   123 VFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLAL 182
             VFNVL SY LL Q TS  A + CGII+ GFWLGVDQE   G+ S +G ++G++AS  ++L
Sbjct:   153 VFNVLLSYLLLKQTTSLYALLACGIIIGGFWLGVDQEGAEGTLSWTGIIFGILASLCVSL 212

Query:   183 YSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLP 242
              +I+TKKVLP V+  IW L++YNN+ + ++ L +  + GE  T+  +  L +  FW  + 
Sbjct:   213 NAIYTKKVLPVVDGSIWHLTFYNNMNACVLFLPLMMITGEFHTLYHFDKLGSPSFWGMMT 272

Query:   243 IGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVL 302
             +GG+ GFAIGYVT LQIK TSPLTHN+SGTAKACAQTV+A  ++ E K  LWW SN +VL
Sbjct:   273 LGGVFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVVYFEETKSLLWWTSNLMVL 332

Query:   303 FGSAAYTFVKQREM-EAQ 319
              GS AYT+VK  EM +AQ
Sbjct:   333 GGSFAYTWVKGLEMRKAQ 350

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q968A5	FUCT1_CAEEL	No assigned EC number	0.5258	0.9418	0.8484	yes	N/A
Q550W6	FUCT1_DICDI	No assigned EC number	0.4050	0.8318	0.7391	yes	N/A
Q96A29	FUCT1_HUMAN	No assigned EC number	0.5485	0.9541	0.8571	yes	N/A
Q8BLX4	FUCT1_MOUSE	No assigned EC number	0.5343	0.9694	0.8732	yes	N/A
A6QM03	FUCT1_BOVIN	No assigned EC number	0.5214	0.9877	0.8873	yes	N/A
Q9VHT4	FUCT1_DROME	No assigned EC number	0.5541	0.9816	0.9525	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	327
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	5e-07

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 50.3 bits (120), Expect = 5e-07
 Identities = 68/311 (21%), Positives = 118/311 (37%), Gaps = 20/311 (6%)

Query: 15  LAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQC-VISAFLCIFLHIFSLFFPNILT 73
            A   Y   SI+    NK +LS L  +    +   Q  V    L I            L 
Sbjct: 9   TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLI------------LK 56

Query: 74  FPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLL 133
           F     FRL       P+S L + MI  ++  L+ + V  Y I ++LT +          
Sbjct: 57  FLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFF 116

Query: 134 AQKTSFSACVCCGIIVMGFWLGV--DQEDLAGSFSI--SGTVYGVIASASLALYSIHTKK 189
             + +    +   ++V+   +    DQ+  A    I   G ++      S A + +  +K
Sbjct: 117 GGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRK 176

Query: 190 VLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADL-NTAYFWLFLPIGGLCG 248
            +   N + +   +YNN+ S  ILL  S LF +        +L   +   +F  I GLC 
Sbjct: 177 RIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMF--ISGLCS 234

Query: 249 FAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY 308
             I Y +   +++TS  T+++ G        +    +++    FL   S  +     A Y
Sbjct: 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294

Query: 309 TFVKQREMEAQ 319
              K ++ + Q
Sbjct: 295 AVAKSKKQQNQ 305

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1442|consensus	347		100.0
KOG1444|consensus	314		100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
KOG1441|consensus	316		99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
PRK11272	292	putative DMT superfamily transporter inner membran	99.97
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
PRK15430	296	putative chloramphenical resistance permease RarD;	99.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.96
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.95
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.94
KOG1443|consensus	349		99.92
KOG1581|consensus	327		99.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.91
KOG1580|consensus	337		99.9
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.89
KOG1582|consensus	367		99.89
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.88
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.85
COG2962	293	RarD Predicted permeases [General function predict	99.81
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.81
KOG2765|consensus	416		99.8
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.8
KOG2234|consensus	345		99.79
KOG4510|consensus	346		99.78
KOG3912|consensus	372		99.77
KOG1583|consensus	330		99.72
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.64
KOG2766|consensus	336		99.47
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.32
COG2510	140	Predicted membrane protein [Function unknown]	99.3
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.16
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.12
KOG4314|consensus	290		99.11
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.07
COG2510	140	Predicted membrane protein [Function unknown]	99.05
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.84
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.82
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.79
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.79
PRK15430	296	putative chloramphenical resistance permease RarD;	98.79
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.74
PLN00411	358	nodulin MtN21 family protein; Provisional	98.58
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.45
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.37
PRK11272	292	putative DMT superfamily transporter inner membran	98.36
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.28
PRK11689	295	aromatic amino acid exporter; Provisional	98.25
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.17
PRK13499	345	rhamnose-proton symporter; Provisional	98.14
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.12
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.11
COG2962	293	RarD Predicted permeases [General function predict	98.08
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.03
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.99
KOG2922|consensus	335		97.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.84
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.69
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.67
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.65
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.64
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.62
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.58
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.56
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.43
COG2076	106	EmrE Membrane transporters of cations and cationic	97.32
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.31
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.25
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.25
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.23
PRK11431	105	multidrug efflux system protein; Provisional	97.19
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.06
PRK11431	105	multidrug efflux system protein; Provisional	97.04
COG2076	106	EmrE Membrane transporters of cations and cationic	97.0
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.95
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.87
PRK13499	345	rhamnose-proton symporter; Provisional	96.69
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.64
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.45
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.44
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.08
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.89
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.65
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.51
KOG4510|consensus	346		95.35
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.29
KOG2234|consensus	345		95.06
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	94.97
KOG1441|consensus	316		94.18
KOG1581|consensus	327		94.11
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.02
KOG2765|consensus	416		92.46
KOG1444|consensus	314		91.96
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	90.78
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	89.55
KOG4314|consensus	290		89.3
KOG1580|consensus	337		88.47
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	87.01
KOG2922|consensus	335		84.46
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	83.67

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.5e-35  Score=266.16  Aligned_cols=288  Identities=20%  Similarity=0.238  Sum_probs=232.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHH
Q psy14376         12 KITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPL   91 (327)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~   91 (327)
                      ++.+....|+..|++.++.||+++++  +++|..++++|+..+.+.+.+....+.+     +.+   +.++++++.+++.
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~   71 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLP-----KRL---KISSALLKLLLPV   71 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCC-----CCC---CCCHHHHHHHHHH
Confidence            45678899999999999999999984  6689999999999998877665322111     112   2668889999999


Q ss_pred             HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcccchhHHH
Q psy14376         92 SILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTV  171 (327)
Q Consensus        92 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~  171 (327)
                      |++.+.+..++|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+.+...++   .+++..|++
T Consensus        72 g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~  148 (302)
T TIGR00817        72 AIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE---LSFNWAGFL  148 (302)
T ss_pred             HHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc---ccccHHHHH
Confidence            99998999999999999999999999999999999999999999999999999999999998754322   355678999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccc-cccc----cchhHHHHHHHHHHH
Q psy14376        172 YGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQ-DYAD----LNTAYFWLFLPIGGL  246 (327)
Q Consensus       172 ~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~  246 (327)
                      ++++|+++||+|.++.||..++.+.++.+.+.|+++.+.+.++|+....++..... +...    ......+...+..+.
T Consensus       149 ~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (302)
T TIGR00817       149 SAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAM  228 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHH
Confidence            99999999999999999987744468899999999999999999887664322111 0000    111122322333333


Q ss_pred             HHHH-HHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        247 CGFA-IGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       247 ~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      .++. .+...+..+++.+|++.++..+++|+.++++|++++||++++.+++|.++++.|+.++++.|
T Consensus       229 ~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       229 GFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            2333 33445678999999999999999999999999999999999999999999999999988644

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=3.2e-33  Score=254.88  Aligned_cols=292  Identities=18%  Similarity=0.166  Sum_probs=234.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHH
Q psy14376          9 RYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINV   88 (327)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~   88 (327)
                      ...++.+.+.+|+..|...++.||+++++  +|+|+.++++|++++.+.+.++...+.+     +.|+ .+-++++++.+
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~-----~~~~-~~~~~~~~~~l  117 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFR-----KIPR-IKSLKLFLKNF  117 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCC-----CCCC-CCCHHHHHHHH
Confidence            36788899999999999999999999985  6569999999999998876655433321     1232 10124568899


Q ss_pred             HHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcccchh
Q psy14376         89 LPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSIS  168 (327)
Q Consensus        89 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~  168 (327)
                      ++.|++........+.|+++++++.+++++++.|+++++++++++|||++++++.+++++++|+.+...++   .++++.
T Consensus       118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~---~~~~~~  194 (350)
T PTZ00343        118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE---LHFTWL  194 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc---chhHHH
Confidence            99999988667777899999999999999999999999999999999999999999999999999976533   456788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCC-----CCceehhhhhhHHHHHHHHHHHHHcCcc--cccc-----cccccchhH
Q psy14376        169 GTVYGVIASASLALYSIHTKKVLPCVN-----NEIWLLSYYNNVYSSIILLFVSGLFGEL--KTVQ-----DYADLNTAY  236 (327)
Q Consensus       169 G~~~~l~s~~~~a~~~v~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~  236 (327)
                      |++++++|++++|.++++.||..++++     .++.+...++.+.+.++++|+....+..  ...+     .........
T Consensus       195 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~  274 (350)
T PTZ00343        195 AFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGI  274 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHH
Confidence            999999999999999999999887643     3455566677889999999988755321  1111     001111122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhc
Q psy14376        237 FWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~  311 (327)
                      .+..++..++..++.+...+..+++.+|.+.++..+++|++++++|++++||++|+.+++|.++++.|+.+|++.
T Consensus       275 ~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        275 IIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            233445556666666777778999999999999999999999999999999999999999999999999999875

>KOG1442|consensus

Probab=100.00  E-value=3.4e-36  Score=250.59  Aligned_cols=317  Identities=54%  Similarity=0.898  Sum_probs=292.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChh
Q psy14376          6 LVSRYVKITLAVSLYWLVSIITVFVNKALLSE--LKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLN   83 (327)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~--~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~   83 (327)
                      .......+...+..+|..|++..+.||+++..  ...+.|++.++.|.++...+...+...-++.+....+|+ .+.|.+
T Consensus        22 l~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~-~~ldl~  100 (347)
T KOG1442|consen   22 LEANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPS-LQLDLA  100 (347)
T ss_pred             HHHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCc-ccccHH
Confidence            35556677789999999999999999999985  446789999999999999999998887776666667776 668888


Q ss_pred             hHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCc
Q psy14376         84 TLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAG  163 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~  163 (327)
                      ..++..++++.+..++.++|++|+|++++++.+-+++..+|+.+++++++|+|-+.....|+++.+.|..+.+++|+.++
T Consensus       101 t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~  180 (347)
T KOG1442|consen  101 TARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTG  180 (347)
T ss_pred             HHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998887778


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHH
Q psy14376        164 SFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPI  243 (327)
Q Consensus       164 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (327)
                      ..++.|.++++.|+++-|+..+++||...+.+...|.+++|+++.+.+..+|...+.||...++.++..++..+|..+.+
T Consensus       181 ~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtL  260 (347)
T KOG1442|consen  181 TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTL  260 (347)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHH
Confidence            89999999999999999999999999988888789999999999999999999999999888888888888899999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchhHHHhhhcc
Q psy14376        244 GGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQYNNK  323 (327)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~~~~~~~~~  323 (327)
                      +|++++.++|...+.+|.++|.+.++.+..+.+..+++++..++|..+...|-|-.+++.|...|.+.|+++++++++++
T Consensus       261 sglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~  340 (347)
T KOG1442|consen  261 SGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQR  340 (347)
T ss_pred             HHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988877766544

>KOG1444|consensus

Probab=100.00  E-value=1.9e-31  Score=229.21  Aligned_cols=309  Identities=21%  Similarity=0.332  Sum_probs=270.2

Q ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCC
Q psy14376          1 MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPF   80 (327)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~   80 (327)
                      |.+++..+....-...+..|+.+|..++++||+++++++||..+.+...|.+.+.+.+......+-.     +.|   ++
T Consensus         1 ~~~~~~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv-----~~~---~l   72 (314)
T KOG1444|consen    1 MRSDEGSKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLV-----NFR---PL   72 (314)
T ss_pred             CCccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhcee-----ecC---Cc
Confidence            4556667777777789999999999999999999999988777777789999999998876655432     344   39


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCC
Q psy14376         81 RLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQED  160 (327)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~  160 (327)
                      |++..|++++.++++.++...+..+++|++++.++++++.+|+++++.+..++|.|+++..|.++....+|......++ 
T Consensus        73 ~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d-  151 (314)
T KOG1444|consen   73 DLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD-  151 (314)
T ss_pred             ChHHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999988855433 


Q ss_pred             cCcccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCccccc-ccccccchhHHHH
Q psy14376        161 LAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTV-QDYADLNTAYFWL  239 (327)
Q Consensus       161 ~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  239 (327)
                        ..++..|..|++...++.+.+.++.|+..+..+.+.+++++|.++++.+.+.....+.||.+.. .+...+.+..++.
T Consensus       152 --~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~  229 (314)
T KOG1444|consen  152 --LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLV  229 (314)
T ss_pred             --ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHH
Confidence              4567679999999999999999999999998888999999999999999999999999887621 2233456677889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchhHHHh
Q psy14376        240 FLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQ  319 (327)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~~~~~  319 (327)
                      .+.++|+++++++|+.+++.+..+|++.++++......+.+.+.+++|++.++...+|..+-+.|.++|++.++++++.+
T Consensus       230 ~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  230 VMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP  309 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence            99999999999999999999999999999999777777777778888999999999999999999999999876665544


Q ss_pred             h
Q psy14376        320 Y  320 (327)
Q Consensus       320 ~  320 (327)
                      +
T Consensus       310 ~  310 (314)
T KOG1444|consen  310 P  310 (314)
T ss_pred             C
Confidence            3

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1.7e-30  Score=236.22  Aligned_cols=300  Identities=10%  Similarity=0.063  Sum_probs=222.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHH
Q psy14376          7 VSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLI   86 (327)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~   86 (327)
                      .+|..+..++.+.--.++.+...+.|..+++ |. +|..+.++|+.++.+++.++...+++++   +.|+   .+++++.
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~-~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~~---~~~~~~~   79 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATSK-GL-NIYPFLGYSYLLASLLLLPSLFFTNRSR---SLPP---LSVSILS   79 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHC-CC-CccHHHHHHHHHHHHHHHHHHHHHHHhc---ccCc---chHHHHH
Confidence            4445555556666666666666777999964 78 5888999999999988887765543211   2232   3466677


Q ss_pred             HHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHH------hcccccchhhHHHHHHhhhhhheeccCC
Q psy14376         87 NVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFL------LAQKTSFSACVCCGIIVMGFWLGVDQED  160 (327)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~------~~e~~s~~~~~~~~l~~~Gv~l~~~~~~  160 (327)
                      .+...+++...+..+.+.+++|++++.++++.++.|++++++++++      +|||++++++.|++++++|+.++....+
T Consensus        80 ~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g  159 (358)
T PLN00411         80 KIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHG  159 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccC
Confidence            7777777765566688999999999999999999999999999999      6999999999999999999988543111


Q ss_pred             c---------------------Ccccc-hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHH
Q psy14376        161 L---------------------AGSFS-ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSG  218 (327)
Q Consensus       161 ~---------------------~~~~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  218 (327)
                      .                     +...+ ..|+++.++|+++||+|++.+|+..++++ +....+.+++.++.+...+...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l  238 (358)
T PLN00411        160 PRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGL  238 (358)
T ss_pred             cccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHH
Confidence            0                     01122 45999999999999999999999888763 3446666777777776666555


Q ss_pred             HcCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHH
Q psy14376        219 LFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSN  298 (327)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~  298 (327)
                      ..++. +........+...+ .+++.++.+.+.++..++++++.+|...++..+++|++++++|++++||++++.+++|+
T Consensus       239 ~~~~~-~~~~~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~  316 (358)
T PLN00411        239 VVEKN-NPSVWIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGG  316 (358)
T ss_pred             HHccC-CcccceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence            54221 11111111122222 35556665544444456899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhhccchhHH
Q psy14376        299 WVVLFGSAAYTFVKQREME  317 (327)
Q Consensus       299 ~lii~g~~l~~~~~~~~~~  317 (327)
                      ++++.|+++..+.++++.+
T Consensus       317 ~LIl~Gv~l~~~~~~~~~~  335 (358)
T PLN00411        317 ILITLGFYAVMWGKANEEK  335 (358)
T ss_pred             HHHHHHHHHHHhhhhhhhh
Confidence            9999999998865554433

>KOG1441|consensus

Probab=99.97  E-value=2.4e-31  Score=233.80  Aligned_cols=301  Identities=24%  Similarity=0.306  Sum_probs=254.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhH
Q psy14376          6 LVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTL   85 (327)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~   85 (327)
                      ..++......+...|+.+++...+.||++++.++|+.|..++..+.+.+.+.......++-.+++  +.     .++..+
T Consensus        11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~--~~-----~~~~~~   83 (316)
T KOG1441|consen   11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS--KI-----SSKLPL   83 (316)
T ss_pred             ccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC--cc-----ccccch
Confidence            45567777889999999999999999999998899999999999999998888887776543221  11     234568


Q ss_pred             HHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCccc
Q psy14376         86 INVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSF  165 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~  165 (327)
                      +.++++|+..+.+..++|.+++|+|+++++++++++|+++.++++++.+|++++..+++++....|+.+.+..   |.++
T Consensus        84 ~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~---e~~f  160 (316)
T KOG1441|consen   84 RTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT---ELSF  160 (316)
T ss_pred             HHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec---cccc
Confidence            8999999999999999999999999999999999999999999999999999999999999999999997763   3679


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhc--CCCCCCceehhhhhhHHHHHHHH-HHHHHcCcccccccccccchhHHHHHHH
Q psy14376        166 SISGTVYGVIASASLALYSIHTKKVL--PCVNNEIWLLSYYNNVYSSIILL-FVSGLFGELKTVQDYADLNTAYFWLFLP  242 (327)
Q Consensus       166 ~~~G~~~~l~s~~~~a~~~v~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (327)
                      |+.|.+.++++.+..+..+++.|+..  ++++.++.+.+.|+...+.+.++ |+....+............+..++..+.
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence            99999999999999999999999998  45667999999999999999999 7766643221110011112223344434


Q ss_pred             HHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchhHH
Q psy14376        243 IGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME  317 (327)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~~~  317 (327)
                      .. ++++..|.+.+..+++++|++.++.+.++.+..+..|+++|+|+.|+.+.+|..+.+.|+.+|++.|.++++
T Consensus       241 ~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  241 NS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            44 899999999999999999999999999999999999999999999999999999999999999987665543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=9.6e-29  Score=221.83  Aligned_cols=276  Identities=20%  Similarity=0.273  Sum_probs=228.0

Q ss_pred             HHHHHHHhcCCC-ChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhccccc
Q psy14376         29 FVNKALLSELKL-DAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLK  107 (327)
Q Consensus        29 ~~~k~~l~~~~~-~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  107 (327)
                      +..+.+.++... ++|.++++.|+....+...+.....+. ++         .++..++++.+.++++.....+.|.+++
T Consensus        17 ~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~al~   86 (303)
T PF08449_consen   17 ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-PK---------SRKIPLKKYAILSFLFFLASVLSNAALK   86 (303)
T ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-cC---------CCcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555543333 379999999999999888877765541 11         1223378889999999999999999999


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcC----cc---cchhHHHHHHHHHHHH
Q psy14376        108 NVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLA----GS---FSISGTVYGVIASASL  180 (327)
Q Consensus       108 ~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~----~~---~~~~G~~~~l~s~~~~  180 (327)
                      |+|.+..++++++.|+++++++.+++|||+++++++++++..+|+++...++..+    .+   .+..|+++.+.|.++.
T Consensus        87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~  166 (303)
T PF08449_consen   87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLD  166 (303)
T ss_pred             hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999954433211    11   1224999999999999


Q ss_pred             HHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHH--cCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy14376        181 ALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGL--FGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQ  258 (327)
Q Consensus       181 a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (327)
                      |.+.+++||..++++.++++.++|++.++.+..++....  .+|..+..+... .++..+..++..++++++.+...+..
T Consensus       167 a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~~~i~~~  245 (303)
T PF08449_consen  167 AFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQFFIFYL  245 (303)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999888888  666555444322 23334666677778888888888889


Q ss_pred             HHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchh
Q psy14376        259 IKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE  315 (327)
Q Consensus       259 ~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~  315 (327)
                      +++.+|++.++.+.+|+..++++++++||+++++.+|+|.++++.|..++.+.++++
T Consensus       246 ~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  246 IKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            999999999999999999999999999999999999999999999999998866544

; GO: 0055085 transmembrane transport

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.97  E-value=1.7e-27  Score=212.84  Aligned_cols=279  Identities=16%  Similarity=0.134  Sum_probs=214.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChh
Q psy14376          4 GTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLN   83 (327)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~   83 (327)
                      ++..+-...++....+|+......    |...++  . +|..+++.|+..+.+++.++...+++     +.     .+++
T Consensus         4 ~~~~~~~~~~~~~~~iWg~~~~~~----K~~~~~--~-~p~~~~~~R~~~a~l~ll~~~~~~~~-----~~-----~~~~   66 (292)
T PRK11272          4 RQLLPLFGALFALYIIWGSTYLVI----RIGVES--W-PPLMMAGVRFLIAGILLLAFLLLRGH-----PL-----PTLR   66 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHH----HHHhcc--C-CHHHHHHHHHHHHHHHHHHHHHHhCC-----CC-----CcHH
Confidence            344444555666777777766654    988874  4 79999999999999888877654321     11     1245


Q ss_pred             hHHHHHHHHHHH-HHHHHHhcccc-cccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCc
Q psy14376         84 TLINVLPLSILF-MSMISFNNLCL-KNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDL  161 (327)
Q Consensus        84 ~~~~~~~~~~~~-~~~~~~~~~~l-~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~  161 (327)
                      ++++....|.+. .....+.+.+. ++++++.++++.++.|+++++++++ +|||++++++.+++++++|+.+...++. 
T Consensus        67 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-  144 (292)
T PRK11272         67 QWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-  144 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-
Confidence            566666667664 45666777888 9999999999999999999999986 6999999999999999999988654322 


Q ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHH
Q psy14376        162 AGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFL  241 (327)
Q Consensus       162 ~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (327)
                       .+.+..|++++++|+++||.|.+..||..++   ++.....+++..+++.+.+.....++...     ...+...|..+
T Consensus       145 -~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i  215 (292)
T PRK11272        145 -LSGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT-----ALPTLSGFLAL  215 (292)
T ss_pred             -cccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc-----ccCCHHHHHHH
Confidence             2345679999999999999999999986543   23456678888888888777665433211     11233446666


Q ss_pred             HHHHHHHHHHHHH-HHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        242 PIGGLCGFAIGYV-TTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       242 ~~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      .+.++++....|. .++.+++.++...+.+.+++|+.+.+++++++||++++.+++|+++++.|+++.+.
T Consensus       216 ~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        216 GYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            7777777666554 45789999999999999999999999999999999999999999999999988654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.97  E-value=1.5e-27  Score=213.84  Aligned_cols=281  Identities=14%  Similarity=0.136  Sum_probs=203.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHH
Q psy14376          9 RYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINV   88 (327)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~   88 (327)
                      +....+++..+|+......    |..+++  + +|..+.++|+.++.+.+.++.  .+  +   +.+         ++..
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~----k~~~~~--~-~p~~~~~~R~~~a~~~l~~~~--~~--~---~~~---------~~~~   61 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVI----KVGLHN--M-PPLMLAGLRFMLVAFPAIFFV--AR--P---KVP---------LNLL   61 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHH----HHHHhc--C-CHHHHHHHHHHHHHHHHHHHh--cC--C---CCc---------hHHH
Confidence            3455667778888877755    988875  4 799999999998776654432  11  1   111         2334


Q ss_pred             HHHHHHHH-HHHHHhcccccc-cchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcccc
Q psy14376         89 LPLSILFM-SMISFNNLCLKN-VGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFS  166 (327)
Q Consensus        89 ~~~~~~~~-~~~~~~~~~l~~-~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~~  166 (327)
                      ...+++.. ....+.+.+++| .+++.++++.++.|+++.+++++++|||++++++.+++++++|+.+...+..++.+.+
T Consensus        62 ~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~  141 (299)
T PRK11453         62 LGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVA  141 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchh
Confidence            44454432 444456677887 6889999999999999999999999999999999999999999998765432223345


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHH
Q psy14376        167 ISGTVYGVIASASLALYSIHTKKVLPCVNN-EIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG  245 (327)
Q Consensus       167 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (327)
                      ..|+++++.++++||.|.++.||..++.+. +......++...+.+.........++...........+...|..+++.+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            679999999999999999999997654321 2223344555554444443333332221110000122345577788888


Q ss_pred             HHHHHHHHHH-HHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        246 LCGFAIGYVT-TLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       246 ~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      +++....|.. ++.+++.++...+.+.+++|+.+.++|++++||++++.+++|+++++.|+.+..+.+
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            8888877765 477899999999999999999999999999999999999999999999998776544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=2.9e-27  Score=211.50  Aligned_cols=272  Identities=13%  Similarity=0.003  Sum_probs=193.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHH
Q psy14376          8 SRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLIN   87 (327)
Q Consensus         8 ~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~   87 (327)
                      +.....+.++.+|+.....    .|..+++  + +|..+.+.|+.++.+++.++.  .+  ++   .+      +++++.
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~----~k~~~~~--~-~P~~~~~~R~~~a~l~l~~~~--~~--~~---~~------~~~~~~   63 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGL----IRGVSES--L-GPVGGAAMIYSVSGLLLLLTV--GF--PR---LR------QFPKRY   63 (295)
T ss_pred             chhHHHHHHHHHHHHHHHH----HHHHHcc--C-ChHHHHHHHHHHHHHHHHHHc--cc--cc---cc------cccHHH
Confidence            4455566677777765554    4998875  4 799999999999988877643  11  11   11      111233


Q ss_pred             HHHHHHHHHHHHHHhccccc----ccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCc-C
Q psy14376         88 VLPLSILFMSMISFNNLCLK----NVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDL-A  162 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~-~  162 (327)
                      ....++....+..+.+.+++    +.+++.++++.++.|+++.+++++++|||++++++.+++++++|++++..++.. +
T Consensus        64 ~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~  143 (295)
T PRK11689         64 LLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLS  143 (295)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccch
Confidence            44444444566666666654    567888899999999999999999999999999999999999999987654321 1


Q ss_pred             -------cccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchh
Q psy14376        163 -------GSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTA  235 (327)
Q Consensus       163 -------~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (327)
                             ...+..|+++++.|+++||.|.++.||..+++  ++....  . ..+...+.+.....++.  ..   . .+.
T Consensus       144 ~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~~~~~--~-~~~~~~l~~~~~~~~~~--~~---~-~~~  212 (295)
T PRK11689        144 LAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK--NGITLF--F-ILTALALWIKYFLSPQP--AM---V-FSL  212 (295)
T ss_pred             hhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC--CchhHH--H-HHHHHHHHHHHHHhcCc--cc---c-CCH
Confidence                   12345699999999999999999999986653  443322  2 23333443333333221  11   1 122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        236 YFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      ..|..+++.++.+...++..++.+++.++...+...+++|++++++|++++||++++.+++|+++++.|+.+...
T Consensus       213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            335555566654444455567899999999999999999999999999999999999999999999999987754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.96  E-value=3.3e-27  Score=211.31  Aligned_cols=286  Identities=11%  Similarity=0.039  Sum_probs=199.9

Q ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCC
Q psy14376          1 MTEGTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPF   80 (327)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~   80 (327)
                      |..++..+.....+++..+|+......    |.. .  +. +|..+.++|+.++.+.+.++...+++++.  ..++  ..
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~----k~~-~--~~-~~~~~~~~R~~~a~~~l~~~~~~~~~~~~--~~~~--~~   68 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYF----KLI-Y--YV-PADEILTHRVIWSFFFMVVLMSICRQWSY--LKTL--IQ   68 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHH----HHh-c--CC-CHHHHHHHHHHHHHHHHHHHHHHHccHHH--HHHH--Hc
Confidence            444556778888888888998877755    765 3  35 69999999999998866655433221110  0000  01


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCC
Q psy14376         81 RLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQED  160 (327)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~  160 (327)
                      +++++......++....++.+++++++++|++.++++.++.|+++++++++++|||++++++.+++++++|++++..+++
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~  148 (296)
T PRK15430         69 TPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG  148 (296)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC
Confidence            23333333344455667899999999999999999999999999999999999999999999999999999998664321


Q ss_pred             cCcccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHH
Q psy14376        161 LAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF  240 (327)
Q Consensus       161 ~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (327)
                         +..    .++++++++||.|.+..||..++...+......++..++.+...+..   .+.....   .......+..
T Consensus       149 ---~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~  215 (296)
T PRK15430        149 ---SLP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSHM---GQNPMSLNLL  215 (296)
T ss_pred             ---Ccc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcccc---cCCcHHHHHH
Confidence               111    46888999999999999886442211222333444444443322211   1111000   1111112333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhc
Q psy14376        241 LPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~  311 (327)
                      +...++.+.+.++..++.+++.+|...+.+.+++|+++.++|++++||++++.+++|+++++.|+.+....
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            44445555555556678999999999999999999999999999999999999999999998888876643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.96  E-value=3.5e-26  Score=204.32  Aligned_cols=272  Identities=12%  Similarity=0.109  Sum_probs=208.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhH
Q psy14376          6 LVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTL   85 (327)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~   85 (327)
                      ..+....+++++.+|...+..    .|+.+++  + +|..+.++|++++.+++.++...++  +   +      .+++++
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~----~K~~~~~--~-~~~~~~~~R~~~a~l~l~~~~~~~~--~---~------~~~~~~   71 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASL----AKSLFPL--V-GAPGVTALRLALGTLILIAIFKPWR--L---R------FAKEQR   71 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHH----HHHHHHH--c-CHHHHHHHHHHHHHHHHHHHHhHHh--c---c------CCHHHH
Confidence            456677778888888876664    4999985  4 7899999999999888876542211  0   1      345667


Q ss_pred             HHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCccc
Q psy14376         86 INVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSF  165 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~  165 (327)
                      +.....|++......+.+.+++|+|++.++++..+.|+++.+++    +||.++  ..++.++++|+.++..++.+..+.
T Consensus        72 ~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~  145 (293)
T PRK10532         72 LPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHV  145 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccC
Confidence            77778888777778888899999999999999999999999887    355544  445667899998865433222334


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHH
Q psy14376        166 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG  245 (327)
Q Consensus       166 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (327)
                      +..|++++++++++||.|.+..||..+++  ++... .+...++++.+.|+....+. ..      ..+...|..+++.+
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~-~~------~~~~~~~~~~l~lg  215 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAG-EA------LWHWSILPLGLAVA  215 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccC-cc------cCCHHHHHHHHHHH
Confidence            56799999999999999999999987654  44444 45667777777776665422 11      11223344456777


Q ss_pred             HHHHHHHHHH-HHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhc
Q psy14376        246 LCGFAIGYVT-TLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       246 ~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~  311 (327)
                      +++...+|.. ++.+++.++...+.+.+++|+++.++|++++||+++..+++|+++++.|++.+...
T Consensus       216 v~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        216 ILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            7877777754 78999999999999999999999999999999999999999999999999988654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=1.4e-25  Score=197.35  Aligned_cols=251  Identities=16%  Similarity=0.178  Sum_probs=197.9

Q ss_pred             HHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHH-HHHHHHHhcccccc
Q psy14376         30 VNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSIL-FMSMISFNNLCLKN  108 (327)
Q Consensus        30 ~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~  108 (327)
                      ..|+.+++ .. +|..+.++|++.+.+.+.+....+         +     ++++++.....+.+ ...+..+.+.|++|
T Consensus         7 ~~k~~~~~-~~-~~~~~~~~r~~~~~l~l~~~~~~~---------~-----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         7 VIGQYLEG-QV-PLYFAVFRRLIFALLLLLPLLRRR---------P-----PLKRLLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             HHHHHHhc-CC-CHHHHHHHHHHHHHHHHHHHHHhc---------c-----CHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45988874 34 789999999999988877654322         1     12224455555554 46788899999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcccchhHHHHHHHHHHHHHHHHHHHH
Q psy14376        109 VGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGVIASASLALYSIHTK  188 (327)
Q Consensus       109 ~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~  188 (327)
                      ++++.++++.++.|+++++++.+++|||++++++.+++++++|+.+...++  +.+.+..|+.+++.|+++|+.+.+..|
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~~~~G~~~~l~a~~~~a~~~~~~k  148 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSINPAGLLLGLGSGISFALGTVLYK  148 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccccHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999865443  234456799999999999999999999


Q ss_pred             hhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHH-HHHHHHhcchhhH
Q psy14376        189 KVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYV-TTLQIKITSPLTH  267 (327)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~  267 (327)
                      +..++.+.++.....+++..+.+.+.+.....++....       +...|..+++.++++....|. .++.+++.++...
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       149 RLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQA-------LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             HHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            98776543344455567788888888877765432211       223355566667776655554 4678999999999


Q ss_pred             HhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhh
Q psy14376        268 NISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGS  305 (327)
Q Consensus       268 ~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~  305 (327)
                      +.+.+++|+.+.+++++++||+++..+++|..+++.|+
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999886

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.95  E-value=3.7e-25  Score=197.26  Aligned_cols=272  Identities=15%  Similarity=0.198  Sum_probs=204.6

Q ss_pred             HHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhcccccccc
Q psy14376         31 NKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVG  110 (327)
Q Consensus        31 ~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  110 (327)
                      ++.+-++ +.+.|.+-++.-++.-.++.......++..++   ...   ..++++.+++.++++....+.+.+.|++|++
T Consensus        32 s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~---~~~---~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTs  104 (334)
T PF06027_consen   32 SSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKK---WLK---VLKRPWWKYFLLALLDVEANYLVVLAYQYTS  104 (334)
T ss_pred             HHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhcccccc---chh---hcchhHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            3444444 77778877777666555544444333332211   110   1233456677789999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCc------CcccchhHHHHHHHHHHHHHHHH
Q psy14376        111 VSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDL------AGSFSISGTVYGVIASASLALYS  184 (327)
Q Consensus       111 ~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~------~~~~~~~G~~~~l~s~~~~a~~~  184 (327)
                      .+.++++.+++.+++++++++++|+|+++.+++|+++++.|++++...+..      +++...+|+++++.|+++||+++
T Consensus       105 vtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~n  184 (334)
T PF06027_consen  105 VTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSN  184 (334)
T ss_pred             HhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999874333211      23456789999999999999999


Q ss_pred             HHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q psy14376        185 IHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSP  264 (327)
Q Consensus       185 v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  264 (327)
                      ++.|+..++.  +..+...+..+++.++..+..... |.....+.+ +. ...+...+..+++-+..+......++..+|
T Consensus       185 V~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~-w~-~~~~~~~v~~~~~lf~~y~l~p~~l~~ssA  259 (334)
T PF06027_consen  185 VLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIH-WT-SQVIGLLVGYALCLFLFYSLVPIVLRMSSA  259 (334)
T ss_pred             HHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccC-CC-hhhHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            9999999864  677888899999999888877766 444443332 22 222333333344444444444567899999


Q ss_pred             hhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccch
Q psy14376        265 LTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQR  314 (327)
Q Consensus       265 ~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~  314 (327)
                      +..++-.......+.+++++++|+++++..++|.+++++|.++|+..+++
T Consensus       260 t~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  260 TFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             ceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            98888778889999999999999999999999999999999999875543

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.94  E-value=1.5e-25  Score=181.90  Aligned_cols=292  Identities=21%  Similarity=0.288  Sum_probs=247.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHH
Q psy14376         15 LAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSIL   94 (327)
Q Consensus        15 ~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~   94 (327)
                      .....|+++|+.+++-||++++..||+-.+.+.+.|...+.+.+.++...+-.           +++..+.|.+++.+++
T Consensus         9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~-----------~fR~t~aK~WfpiSfL   77 (309)
T COG5070           9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLV-----------EFRLTKAKKWFPISFL   77 (309)
T ss_pred             hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHh-----------heehhhhhhhcCHHHH
Confidence            46778999999999999999999899888999999999999888887765432           1555568899999999


Q ss_pred             HHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcC-----cccchhH
Q psy14376         95 FMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLA-----GSFSISG  169 (327)
Q Consensus        95 ~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~-----~~~~~~G  169 (327)
                      ...+......+++|++++.+++.++++.+.++..+..++|.|.+..+..+-++.+..-.+...++.+.     ...| .|
T Consensus        78 Lv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~G  156 (309)
T COG5070          78 LVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PG  156 (309)
T ss_pred             HHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-Cc
Confidence            99999999999999999999999999999999999999999999999999999988887766554321     1344 39


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHH
Q psy14376        170 TVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF  249 (327)
Q Consensus       170 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (327)
                      .+|+....++.|.+....||..+-.+....+.++|.++.+.++++.+++..+|+++---.+.. ....+..+.++|+++.
T Consensus       157 Y~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl-~~d~l~am~ISgl~sv  235 (309)
T COG5070         157 YLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNL-SVDSLMAMFISGLCSV  235 (309)
T ss_pred             eEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCC-ChHHHHHHHHHHHHHh
Confidence            999999999999999999998887677788999999999999999999999776553111111 1222556689999999


Q ss_pred             HHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchhHHHh
Q psy14376        250 AIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREMEAQ  319 (327)
Q Consensus       250 ~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~~~~~  319 (327)
                      ...|..-|+.+-+++++.++.+.+......+.|.++||||.+.+.+....+=..+..+|.+.++++++++
T Consensus       236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q  305 (309)
T COG5070         236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQ  305 (309)
T ss_pred             hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999998888888888888665544443

>KOG1443|consensus

Probab=99.92  E-value=1.1e-23  Score=178.87  Aligned_cols=295  Identities=22%  Similarity=0.265  Sum_probs=242.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChh-h
Q psy14376          6 LVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLN-T   84 (327)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~-~   84 (327)
                      .+.+++.+. .+..|.+.|++..+.+|+...+  ++.|++++.+|+++-+++....+...+.+.++.+    ++++|+ .
T Consensus        11 ~~~rV~~L~-lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r----~~~sw~~~   83 (349)
T KOG1443|consen   11 LMNRVLTLA-LVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRAR----VVLSWRDY   83 (349)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccc----cCCcHHHH
Confidence            455555555 5599999999999999988764  5679999999999999998887776554322112    347765 5


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcc
Q psy14376         85 LINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGS  164 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~  164 (327)
                      .|+..+.++..+....+.|+++.|++.+.+++.++++++|+.+++.++.-||+++.-.+.+++...|+++.+..+   .+
T Consensus        84 Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks---Tq  160 (349)
T KOG1443|consen   84 LRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS---TQ  160 (349)
T ss_pred             HHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc---cc
Confidence            778889999999999999999999999999999999999999999999889999999999999999999877644   46


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcCCCC---CCceehhhhhhHHHHHHHHHHHHHcCccccccc-----ccccch-h
Q psy14376        165 FSISGTVYGVIASASLALYSIHTKKVLPCVN---NEIWLLSYYNNVYSSIILLFVSGLFGELKTVQD-----YADLNT-A  235 (327)
Q Consensus       165 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~  235 (327)
                      ++..|..++.+|+++.++-..+++.++++.+   .+|....++..+...+.++|..+..+.+.....     .....+ .
T Consensus       161 f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~  240 (349)
T KOG1443|consen  161 FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLIL  240 (349)
T ss_pred             eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHH
Confidence            8889999999999999999999999888765   379999999999999999998887754433211     111111 1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        236 YFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      .....+..+|..+++.-.+-+....+++..+.++.+..+.+.+.++|..+.+|+++...|+|..+...|+..+.+
T Consensus       241 rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  241 RVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            224445677778888877778888999999999999999999999999999999999999999999999998843

>KOG1581|consensus

Probab=99.91  E-value=3e-22  Score=170.39  Aligned_cols=266  Identities=12%  Similarity=0.051  Sum_probs=221.9

Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Q psy14376         38 LKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIG  117 (327)
Q Consensus        38 ~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l  117 (327)
                      ..|++|.++.+.|-+++.+.-.++....++.     .+     ....+.++...++.......+++.||+|++.++..+-
T Consensus        46 ~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~-----~~-----~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~La  115 (327)
T KOG1581|consen   46 ERFEHSLFLVFCQRLVALLVSYAMLKWWKKE-----LS-----GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLA  115 (327)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHhccccc-----CC-----CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHH
Confidence            4588999999999999999887766554332     11     1222677888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCc-----C-cccchhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14376        118 RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDL-----A-GSFSISGTVYGVIASASLALYSIHTKKVL  191 (327)
Q Consensus       118 ~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~-----~-~~~~~~G~~~~l~s~~~~a~~~v~~~~~~  191 (327)
                      +++.-+.+++.+.++.|+|++.+++++..+...|+.+....++.     + .++++.|+.++..+.++.++.+..++++.
T Consensus       116 KscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf  195 (327)
T KOG1581|consen  116 KSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLF  195 (327)
T ss_pred             HHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHh
Confidence            99999999999999999999999999999999999884332221     1 24678899999999999999999999999


Q ss_pred             CCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhh
Q psy14376        192 PCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISG  271 (327)
Q Consensus       192 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  271 (327)
                      ++++.+++.++++.++++++.........|...+..++... ++..+.=++..+.++.+.|.+.+..+++-++.+.+.++
T Consensus       196 ~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~-hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~  274 (327)
T KOG1581|consen  196 KKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKE-HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIM  274 (327)
T ss_pred             ccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHc-ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHH
Confidence            99999999999999999999887776655555554444322 33334445666778999999999999999999999999


Q ss_pred             cchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccch
Q psy14376        272 TAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQR  314 (327)
Q Consensus       272 ~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~  314 (327)
                      ..|..++++++.+++|+++++.||+|..+++.|..+-.+.+++
T Consensus       275 ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  275 TTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999887776555

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.91  E-value=9.8e-22  Score=174.74  Aligned_cols=268  Identities=10%  Similarity=0.005  Sum_probs=177.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHH
Q psy14376         14 TLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSI   93 (327)
Q Consensus        14 ~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~   93 (327)
                      +++..+|-.....    .|...++.   ++.  .+.+.....+.+.++...+...+   +.+.   .+++.+......+.
T Consensus         7 ~~aa~~~a~~~~~----~k~~~~~~---~~~--~~~~~~~~~~~l~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~   71 (281)
T TIGR03340         7 VFSALMHAGWNLM----AKSHADKE---PDF--LWWALLAHSVLLTPYGLWYLAQV---GWSR---LPATFWLLLAISAV   71 (281)
T ss_pred             HHHHHHHHHHHHH----HhhcCCch---hHH--HHHHHHHHHHHHHHHHHHhcccC---CCCC---cchhhHHHHHHHHH
Confidence            4445555554443    37554432   443  46666666656555444321111   1221   23343444455555


Q ss_pred             HHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcccchhHHHHH
Q psy14376         94 LFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYG  173 (327)
Q Consensus        94 ~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~~~  173 (327)
                      ....+..+.+.++++.|++.++.+.++.|+++.+++++++|||++++++.|+.+++.|+.+...++.  ...+..|+.++
T Consensus        72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~--~~~~~~g~~~~  149 (281)
T TIGR03340        72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF--AQHRRKAYAWA  149 (281)
T ss_pred             HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc--cccchhHHHHH
Confidence            5668888889999999999999999999999999999999999999999999999999998654332  22345688899


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCce-ehhhhhhHHHHHHH-HHHHHH---cCcccccccccccchhHHHHHHHHHHHHH
Q psy14376        174 VIASASLALYSIHTKKVLPCVNNEIW-LLSYYNNVYSSIIL-LFVSGL---FGELKTVQDYADLNTAYFWLFLPIGGLCG  248 (327)
Q Consensus       174 l~s~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (327)
                      ++++++|+.|.+..|+..++.  ++. ....+. ..+.... .|+...   .++. ..    ...+...+. .++.+.+.
T Consensus       150 l~aal~~a~~~i~~k~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~-~~~~~~~~  220 (281)
T TIGR03340       150 LAAALGTAIYSLSDKAAALGV--PAFYSALGYL-GIGFLAMGWPFLLLYLKRHGR-SM----FPYARQILP-SATLGGLM  220 (281)
T ss_pred             HHHHHHHHHhhhhccccccch--hcccccHHHH-HHHHHHHHHHHHHHHHHHhcc-ch----hhhHHHHHH-HHHHHHHH
Confidence            999999999999888764432  222 222221 1222221 222221   1111 10    111122233 33344344


Q ss_pred             HHH-HHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhh
Q psy14376        249 FAI-GYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAA  307 (327)
Q Consensus       249 ~~~-~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l  307 (327)
                      ... +...++.+++.++...+...+++|+++.++|++++||+++..+++|+.+++.|+.+
T Consensus       221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            443 44456889999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1580|consensus

Probab=99.90  E-value=6.8e-23  Score=167.79  Aligned_cols=260  Identities=15%  Similarity=0.165  Sum_probs=218.7

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Q psy14376         40 LDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRS  119 (327)
Q Consensus        40 ~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~  119 (327)
                      |...+.+.|+|.....+..-++..++++. +         .|+..-+.+..+++.|.+.+...|.+++|+|.+++.+-++
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~ir~~~-~---------~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKS  119 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLIRKKT-E---------IDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKS  119 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheeecccc-c---------ccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhccc
Confidence            67788999999999999887766554321 1         2332346788999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCC----cCcccchhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy14376        120 LTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQED----LAGSFSISGTVYGVIASASLALYSIHTKKVLPCVN  195 (327)
Q Consensus       120 ~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~----~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~  195 (327)
                      +.|+.++++++++.++++++++++|+++.+.|+++....++    .+++....|-++.++|....++....++|+...++
T Consensus       120 cKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq  199 (337)
T KOG1580|consen  120 CKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQ  199 (337)
T ss_pred             CCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhc
Confidence            99999999999999999999999999999999999766543    12233346999999999999999999999988888


Q ss_pred             CCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchH
Q psy14376        196 NEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKA  275 (327)
Q Consensus       196 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  275 (327)
                      .+...+++++++.+.+.+.....+.||...+..+..- ++..|.=+...++++.+.+++.++.+...+|.+.+++...+.
T Consensus       200 ~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R-hP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRK  278 (337)
T KOG1580|consen  200 RTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR-HPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRK  278 (337)
T ss_pred             cCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHh-ccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHH
Confidence            8888999999999999998888888887655444332 233344456667788888999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        276 CAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       276 v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      .++++.++++|+++++..||+|.++++.|...-..
T Consensus       279 fFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  279 FFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            99999999999999999999999999998876443

>TIGR00688 rarD rarD protein

Probab=99.89  E-value=5.1e-21  Score=167.96  Aligned_cols=251  Identities=12%  Similarity=0.062  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCcc-ccCCCCCCCCh-hhHH
Q psy14376          9 RYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNI-LTFPTGNPFRL-NTLI   86 (327)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~-~~~p~~~~~~~-~~~~   86 (327)
                      .....++++.+|+......    |+ ..+  . +|..+.++|++++.+.+.++...++++++. .+.++   .++ +.+.
T Consensus         3 g~~~~i~a~~~wg~~~~~~----k~-~~~--~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~   71 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYS----KL-LKP--L-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKR---IQKRPLIL   71 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHH----HH-hcc--C-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhC---cccchHHH
Confidence            5567778888998888865    87 443  4 799999999999988876655433221100 01110   112 2233


Q ss_pred             HHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcccc
Q psy14376         87 NVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFS  166 (327)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~~  166 (327)
                      .....+++...+..+.+.+++++++++++++.+++|+++++++++++|||++++++.+++++++|++++..+.   ++.+
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~---~~~~  148 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK---GSLP  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc---CCch
Confidence            4556676777889999999999999999999999999999999999999999999999999999999865432   1112


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHH
Q psy14376        167 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL  246 (327)
Q Consensus       167 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (327)
                          .++++++++||.|.+..||..++   +..+...+. ....+...+.....+.. .. .  .......|..++..++
T Consensus       149 ----~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~l~~~g~  216 (256)
T TIGR00688       149 ----WEALVLAFSFTAYGLIRKALKNT---DLAGFCLET-LSLMPVAIYYLLQTDFA-TV-Q--QTNPFPIWLLLVLAGL  216 (256)
T ss_pred             ----HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHHH-HHHHHHHHHHHHHhccC-cc-c--ccCchhHHHHHHHHHH
Confidence                35788999999999999886442   222222211 11222222211121111 10 0  1111123556666676


Q ss_pred             HHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHH
Q psy14376        247 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYW  285 (327)
Q Consensus       247 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~  285 (327)
                      ++.+.++..++.+++.++...+...+++|+.++++|.+.
T Consensus       217 ~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       217 ITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            655555566789999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1582|consensus

Probab=99.89  E-value=7.2e-22  Score=164.96  Aligned_cols=293  Identities=11%  Similarity=0.114  Sum_probs=238.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-hhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHH
Q psy14376          9 RYVKITLAVSLYWLVSIITVFVNKALLSELKLD-APLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLIN   87 (327)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~   87 (327)
                      ++...++++....+..+.--.+..++++..+|. ..+.+++.|+++-..+-++..+..+.  |+...|         ||.
T Consensus        40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~--k~r~iP---------~rt  108 (367)
T KOG1582|consen   40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQT--KRRVIP---------WRT  108 (367)
T ss_pred             hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecc--cceecc---------hhH
Confidence            333344444545554555555778888888884 78999999988775555544332222  222445         788


Q ss_pred             HHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhe-eccCCcCcccc
Q psy14376         88 VLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLG-VDQEDLAGSFS  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~-~~~~~~~~~~~  166 (327)
                      +..++.+..+.+.+.|-++.|++.+...+.+++..+.+++.+.++-++|+...++.+..+..+|.++. ..|...++++|
T Consensus       109 Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~  188 (367)
T KOG1582|consen  109 YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFN  188 (367)
T ss_pred             hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcc
Confidence            88999999999999999999999999999999999999999999999999999999999999999994 44445667899


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHH
Q psy14376        167 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL  246 (327)
Q Consensus       167 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (327)
                      ..|+...-+|.++.|.-...++|..+.++.+..++.+|+...|.+.++......||..+.+.+..-+........++-++
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence            99999999999999999999999999888889999999999999999999999999888776643334434444555556


Q ss_pred             HHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        247 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       247 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      .+++...+....++..+|.+...++..+...++++|+++|..|+|.+..-|..+++.|+++..+.+
T Consensus       269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            666665555667899999999999999999999999999999999999999999999999887765

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.88  E-value=2.8e-19  Score=159.34  Aligned_cols=278  Identities=17%  Similarity=0.129  Sum_probs=192.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHH
Q psy14376          9 RYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINV   88 (327)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~   88 (327)
                      ......+....|.......    |...++  ..++....+.|.....+........++. .   +.+    ..++.+...
T Consensus         8 ~~~~~l~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~----~~~~~~~~~   73 (292)
T COG0697           8 GLLALLLWGLLWGLSFIAL----KLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPR-G---LRP----ALRPWLLLL   73 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHH----HHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhcc-c---ccc----cccchHHHH
Confidence            3334444445555555543    555543  2256666777988888874333322210 0   111    111122334


Q ss_pred             HHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHH-HHhcccccchhhHHHHHHhhhhhheeccCCcCcccch
Q psy14376         89 LPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSY-FLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSI  167 (327)
Q Consensus        89 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~-~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  167 (327)
                      ...++.......+.+.++++++++.++++.++.|+++.+++. +++|||++++++.++.+++.|+.++..++..+...+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~  153 (292)
T COG0697          74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSL  153 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHH
Confidence            444445568888899999999999999999999999999997 6679999999999999999999998876543211146


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhh-hhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHH
Q psy14376        168 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSY-YNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL  246 (327)
Q Consensus       168 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (327)
                      .|+.+++.+++++|++.+..|+.. +.  ++..... ++..  ...+........+..      ...+...+..+.+.++
T Consensus       154 ~g~~~~l~a~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~  222 (292)
T COG0697         154 LGLLLALAAALLWALYTALVKRLS-RL--GPVTLALLLQLL--LALLLLLLFFLSGFG------APILSRAWLLLLYLGV  222 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-CC--ChHHHHHHHHHH--HHHHHHHHHHhcccc------ccCCHHHHHHHHHHHH
Confidence            799999999999999999999876 32  4444444 4333  122222222211111      1112233555666676


Q ss_pred             HHHH-HHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhc
Q psy14376        247 CGFA-IGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       247 ~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~  311 (327)
                      ++.. .++..++..+..++...+...+.+|+.+.+++++++||+++..+++|..+++.|+.+....
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         223 FSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            7664 4555578899999999999999999999999999999999999999999999999887654

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.85  E-value=7.3e-19  Score=145.93  Aligned_cols=262  Identities=15%  Similarity=0.108  Sum_probs=207.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHH
Q psy14376         15 LAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSIL   94 (327)
Q Consensus        15 ~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~   94 (327)
                      -.+......++.     |.++...   .|.-.++.|..++.+++....+-.+           .++++++++.....|..
T Consensus        20 amvsiq~Gas~A-----k~LFP~v---G~~g~t~lRl~~aaLIll~l~RPwr-----------~r~~~~~~~~~~~yGvs   80 (292)
T COG5006          20 AMVSIQSGASFA-----KSLFPLV---GAAGVTALRLAIAALILLALFRPWR-----------RRLSKPQRLALLAYGVS   80 (292)
T ss_pred             HHHHHHhhHHHH-----HHHcccc---ChhhHHHHHHHHHHHHHHHHhhHHH-----------hccChhhhHHHHHHHHH
Confidence            344444444443     7777654   6788999999999988887664322           12667778999999999


Q ss_pred             HHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcccchhHHHHHH
Q psy14376         95 FMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGSFSISGTVYGV  174 (327)
Q Consensus        95 ~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~~~l  174 (327)
                      .+.++.++|.+++.+|.+.+..+-.+.|+.+..++-    +  +.++...+.+.+.|+.+...+..+..+.|+.|..+++
T Consensus        81 Lg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al  154 (292)
T COG5006          81 LGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALAL  154 (292)
T ss_pred             HHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHH
Confidence            999999999999999999999999999999887762    2  3456677788999998866554444577889999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHH
Q psy14376        175 IASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYV  254 (327)
Q Consensus       175 ~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
                      .++.||+.|.+.-||.-+.  .+..+.+...+..+.++.+|+.......       ...++..+..-+..++++..+-|+
T Consensus       155 ~AG~~Wa~YIv~G~r~g~~--~~g~~g~a~gm~vAaviv~Pig~~~ag~-------~l~~p~ll~laLgvavlSSalPYs  225 (292)
T COG5006         155 GAGACWALYIVLGQRAGRA--EHGTAGVAVGMLVAALIVLPIGAAQAGP-------ALFSPSLLPLALGVAVLSSALPYS  225 (292)
T ss_pred             HHhHHHHHHHHHcchhccc--CCCchHHHHHHHHHHHHHhhhhhhhcch-------hhcChHHHHHHHHHHHHhcccchH
Confidence            9999999999999998753  2455677788888888888887754332       233444555566778888888888


Q ss_pred             H-HHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        255 T-TLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       255 ~-~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      . ....++.++.+++.+..+||..+.+.|++++||++|+.||+|+..++.++.=...
T Consensus       226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            6 4568899999999999999999999999999999999999999999998874444

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.81  E-value=5.9e-17  Score=138.20  Aligned_cols=288  Identities=15%  Similarity=0.080  Sum_probs=203.8

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChh
Q psy14376          4 GTLVSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLN   83 (327)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~   83 (327)
                      ++..++...-+.+...|+......    |.+- +.   ++..+...|.+-+...+.......|+++.-.+.-    .+++
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~----kll~-~~---~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~----~~p~   70 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYF----KLLE-PL---PATEILAHRVIWSFPFMLALLFLLRQWRELKQLL----KQPK   70 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHH----HHHc-cC---CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH----hCcH
Confidence            445667777778888888877765    6554 33   7899999999999888887776655432211111    1223


Q ss_pred             hHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCc
Q psy14376         84 TLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAG  163 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~  163 (327)
                      .+......+++...+...+.++..+-.+-.++.--...|++..+++.+++|||+++.|++++.++.+||..-....   +
T Consensus        71 ~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~---g  147 (293)
T COG2962          71 TLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL---G  147 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc---C
Confidence            3444555566666888888899999888888898999999999999999999999999999999999999844322   4


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHH
Q psy14376        164 SFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPI  243 (327)
Q Consensus       164 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (327)
                      ++++..+    .=+++|+.|... ||..+   .++.+-.....+.-.+..+......++..+..   ...+...+..++.
T Consensus       148 ~lpwval----~la~sf~~Ygl~-RK~~~---v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~---~~~~~~~~~LLv~  216 (293)
T COG2962         148 SLPWVAL----ALALSFGLYGLL-RKKLK---VDALTGLTLETLLLLPVALIYLLFLADSGQFL---QQNANSLWLLLVL  216 (293)
T ss_pred             CCcHHHH----HHHHHHHHHHHH-HHhcC---CchHHhHHHHHHHHhHHHHHHHHHHhcCchhh---hcCCchHHHHHHH
Confidence            6676544    456789999954 44444   34444444444444444444444444433311   1112233566677


Q ss_pred             HHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchhHH
Q psy14376        244 GGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREME  317 (327)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~~~  317 (327)
                      .|..+.+--.......++.+-.+.++++|.+|....++|++++||+++..+.+..+.+-.|..++.....++.+
T Consensus       217 aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r  290 (293)
T COG2962         217 AGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTAR  290 (293)
T ss_pred             hhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            77666543222235578888889999999999999999999999999999999999999999999876554443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.81  E-value=4.1e-17  Score=145.32  Aligned_cols=267  Identities=13%  Similarity=0.095  Sum_probs=186.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHH
Q psy14376         10 YVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVL   89 (327)
Q Consensus        10 ~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~   89 (327)
                      ....++++.+|+......    |+..   +.+ +..+.  |..++.+++..+....+. ++   .     .+++.+..-+
T Consensus         3 ~l~~lia~~~wGs~g~~~----k~~~---g~~-~~~~~--~~~~g~l~~~~~~~~~~~-~~---~-----~~~~~~~~g~   63 (290)
T TIGR00776         3 ILIALIPALFWGSFVLIN----VKIG---GGP-YSQTL--GTTFGALILSIAIAIFVL-PE---F-----WALSIFLVGL   63 (290)
T ss_pred             hHHHHHHHHHHhhhHHHH----hccC---CCH-HHHHH--HHHHHHHHHHHHHHHHhC-Cc---c-----cccHHHHHHH
Confidence            345567788888877765    6544   553 33333  677777776665554321 11   1     1233333344


Q ss_pred             HHHHHHHHHHHHhcccccccchhHHHHHHH-HHHHHHHHHHHHHhcccccchh----hHHHHHHhhhhhheeccCCcCcc
Q psy14376         90 PLSILFMSMISFNNLCLKNVGVSFYYIGRS-LTTVFNVLFSYFLLAQKTSFSA----CVCCGIIVMGFWLGVDQEDLAGS  164 (327)
Q Consensus        90 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~-~~pi~~~i~~~~~~~e~~s~~~----~~~~~l~~~Gv~l~~~~~~~~~~  164 (327)
                      ..|+.....+.++..+.++++++.+..+.+ +.|++..+++.+++|||.++++    +.++++.++|+.+....+.++.+
T Consensus        64 l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~  143 (290)
T TIGR00776        64 LSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAG  143 (290)
T ss_pred             HHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccc
Confidence            445556677788889999999999988888 8899999999999999999999    99999999999986543322111


Q ss_pred             ----cc-hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhh---hHHHHHHHHHHHHHcCcccccccccccchhH
Q psy14376        165 ----FS-ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYN---NVYSSIILLFVSGLFGELKTVQDYADLNTAY  236 (327)
Q Consensus       165 ----~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (327)
                          .+ ..|++++++|+++|+.|.+..|+. +   .++++..+.+   ...++....+..  . +.++      ..+..
T Consensus       144 ~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~---~~~~~~~~~~~~g~~~~~~~~~~~~--~-~~~~------~~~~~  210 (290)
T TIGR00776       144 IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-G---VDGLSVLLPQAIGMVIGGIIFNLGH--I-LAKP------LKKYA  210 (290)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHc-C---CCcceehhHHHHHHHHHHHHHHHHH--h-cccc------hHHHH
Confidence                23 679999999999999999999875 2   4677774444   333333333221  1 1111      11222


Q ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHH-hcchhhHHhhhcchHHHHHHHHHHHhCCccchhhh----hHHHHHHhhhhhhhh
Q psy14376        237 FWLFLPIGGLCGFAIGYVT-TLQIK-ITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWW----VSNWVVLFGSAAYTF  310 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~----iG~~lii~g~~l~~~  310 (327)
                      .+..++ .|++ +..++.. ....+ +.++...+++.+.+|+.+++.+++++||+.+..++    +|+++++.|+.+...
T Consensus       211 ~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       211 ILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            233333 6666 4554443 35666 88899999999999999999999999999999999    999999999987543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765|consensus

Probab=99.80  E-value=2.3e-18  Score=150.53  Aligned_cols=227  Identities=13%  Similarity=0.170  Sum_probs=171.2

Q ss_pred             HHHHHHHHHHH----HHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCC-
Q psy14376         86 INVLPLSILFM----SMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQED-  160 (327)
Q Consensus        86 ~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~-  160 (327)
                      ++....++.+|    ....+.|.||++++++..+++.+++-+|+.+++.++..||+|..+.+++.+.+.|++++..+++ 
T Consensus       156 ~~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~  235 (416)
T KOG2765|consen  156 TQTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSK  235 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccc
Confidence            35555566555    5777888999999999999999999999999999999999999999999999999999766533 


Q ss_pred             ----cCcccchhHHHHHHHHHHHHHHHHHHHHhhcCCCC--CCceehhhhhhHHHHHHHHHHHHHcCcccccccccccch
Q psy14376        161 ----LAGSFSISGTVYGVIASASLALYSIHTKKVLPCVN--NEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNT  234 (327)
Q Consensus       161 ----~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (327)
                          .+++....|.+++++|++.||+|.++.||...+++  .+.-....+..++..+.+.|...+. +......++.++.
T Consensus       236 ~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL-~~~~~e~F~lP~~  314 (416)
T KOG2765|consen  236 QNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL-DFFGEERFELPSS  314 (416)
T ss_pred             ccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH-HHhccCcccCCCC
Confidence                12344578999999999999999999999988774  2333344455566666666555443 1111111212222


Q ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccc
Q psy14376        235 AYFWLFLPIGGLCGF-AIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ  313 (327)
Q Consensus       235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~  313 (327)
                      .. ...++..++++. +.-|...++.-.++|++.+.-..+...++.+...++=|.++|+.+++|...|++|.+..++..+
T Consensus       315 ~q-~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  315 TQ-FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             ce-eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            22 223344445554 4567777888999999988888888889999898888999999999999999999998887554


Q ss_pred             h
Q psy14376        314 R  314 (327)
Q Consensus       314 ~  314 (327)
                      .
T Consensus       394 ~  394 (416)
T KOG2765|consen  394 N  394 (416)
T ss_pred             c
Confidence            3

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.80  E-value=6.3e-18  Score=145.92  Aligned_cols=216  Identities=12%  Similarity=0.191  Sum_probs=170.1

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCC
Q psy14376         81 RLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQED  160 (327)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~  160 (327)
                      ++++...+..++++|...+.+.+.++++++++.++++.++..+++++++++++|+|++++||.++.+.++|+.+...+..
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34556678888999999999999999999999999999999999999999999999999999999999999998543322


Q ss_pred             cC--------------cccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCccccc
Q psy14376        161 LA--------------GSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTV  226 (327)
Q Consensus       161 ~~--------------~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  226 (327)
                      .+              ......|+++.+.++++.|+..++.||.+|+.+.+.+........+|.++.++..... |....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~-~~~~~  171 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLS-DGSAI  171 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcc-ccccc
Confidence            11              1123579999999999999999999999998877777888887888888877765544 22222


Q ss_pred             ccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHH
Q psy14376        227 QDY--ADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVV  301 (327)
Q Consensus       227 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~li  301 (327)
                      .+.  .+..+...|..+...++.|....+    .+|+.+...-++...+..+.+.+.++.+||.+++....+|..++
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            111  112233345555555555544443    47888888888888899999999999999999999999997653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234|consensus

Probab=99.79  E-value=1.7e-16  Score=139.16  Aligned_cols=281  Identities=14%  Similarity=0.198  Sum_probs=203.0

Q ss_pred             HHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHhhhcc--CccccCCCC-CCCChhhHHHHHHHHHHHHHHHHHhc
Q psy14376         29 FVNKALLSEL--KLDAPLFITWFQCVISAFLCIFLHIFSLFF--PNILTFPTG-NPFRLNTLINVLPLSILFMSMISFNN  103 (327)
Q Consensus        29 ~~~k~~l~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~--~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (327)
                      +.-||.-+..  .| .|....++-=++-.+++....+...++  +|..+..++ .-..+++..++..++++|...+.+.+
T Consensus        32 l~l~ys~~~~~~~f-~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~y  110 (345)
T KOG2234|consen   32 LLLRYSRTREKPMF-LPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQY  110 (345)
T ss_pred             HHHHHHhcCCCCCc-chhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHH
Confidence            3456665432  25 456666666555566655555444221  111111110 11223345567778999999888999


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheecc---CC-----cCcccchhHHHHHHH
Q psy14376        104 LCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQ---ED-----LAGSFSISGTVYGVI  175 (327)
Q Consensus       104 ~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~---~~-----~~~~~~~~G~~~~l~  175 (327)
                      .++.+.+++++++..++..+.++++..+++++|.+++||.++++.+.|+.+...+   +.     ...+..+.|....+.
T Consensus       111 val~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~  190 (345)
T KOG2234|consen  111 VALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLV  190 (345)
T ss_pred             HHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHH
Confidence            9999999999999999999999999999999999999999999999999986521   11     113456789999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCccccc--ccccccchhHHHHHHHHHHHHHHHHHH
Q psy14376        176 ASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTV--QDYADLNTAYFWLFLPIGGLCGFAIGY  253 (327)
Q Consensus       176 s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (327)
                      ++.+.++..++.+|++|+.+.+.|-.......+|.++.+...... |....  ..+-...+...|..++..++-|...+.
T Consensus       191 ~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs~  269 (345)
T KOG2234|consen  191 ACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVSL  269 (345)
T ss_pred             HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCccccccHHHHHHHHHHhccchhHHH
Confidence            999999999999999998777777777777777887776666555 32222  112223345557766666655554443


Q ss_pred             HHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchh
Q psy14376        254 VTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQRE  315 (327)
Q Consensus       254 ~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~  315 (327)
                      .    +|+.+-..-+....+..+++.+.++.++|.++|....+|..+++.++.+|...+.+.
T Consensus       270 v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  270 V----MKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             H----HHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            3    677777766777777889999999999999999999999999999999999655543

>KOG4510|consensus

Probab=99.78  E-value=5.2e-20  Score=153.70  Aligned_cols=254  Identities=13%  Similarity=0.123  Sum_probs=192.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Q psy14376         42 APLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLT  121 (327)
Q Consensus        42 ~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~  121 (327)
                      .|....-.|+++-.+..++....++ ++  .--|      ....+++++-|+.........+++++|.+.+.+.++..++
T Consensus        63 ~p~e~a~~r~l~~mlit~pcliy~~-~~--v~gp------~g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFss  133 (346)
T KOG4510|consen   63 DPMELASFRLLVRMLITYPCLIYYM-QP--VIGP------EGKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSS  133 (346)
T ss_pred             ChhHhhhhhhhhehhhhheEEEEEe-ee--eecC------CCcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecC
Confidence            4788888887777776666443322 11  0012      1112456666777777888888999999999999999999


Q ss_pred             HHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCC-----c---C--c-ccchhHHHHHHHHHHHHHHHHHHHHhh
Q psy14376        122 TVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQED-----L---A--G-SFSISGTVYGVIASASLALYSIHTKKV  190 (327)
Q Consensus       122 pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~-----~---~--~-~~~~~G~~~~l~s~~~~a~~~v~~~~~  190 (327)
                      |+++.++++.++|||+|+.+.++.++.+.|++++..|..     .   +  . +-+..|.+.++.++++-|...+..|++
T Consensus       134 Pvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~i  213 (346)
T KOG4510|consen  134 PVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYI  213 (346)
T ss_pred             hHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHh
Confidence            999999999999999999999999999999999876531     1   1  1 233458888889999888888899998


Q ss_pred             cCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhh
Q psy14376        191 LPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNIS  270 (327)
Q Consensus       191 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  270 (327)
                      .|+.  +....+.|-.+.+.+..++.....|+.    ..  +....-|+.++..|+.++..|....+.++.-.|...++.
T Consensus       214 Gk~~--h~~msvsyf~~i~lV~s~I~~~~ig~~----~l--P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim  285 (346)
T KOG4510|consen  214 GKNA--HAIMSVSYFSLITLVVSLIGCASIGAV----QL--PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIM  285 (346)
T ss_pred             hccc--cEEEEehHHHHHHHHHHHHHHhhccce----ec--CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehh
Confidence            7764  455556666666777666665555432    11  122233556678888999999998888887777778999


Q ss_pred             hcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        271 GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       271 ~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      .+..-+++.++-+++|||.+|+++|+|+++++.+.++....|
T Consensus       286 ~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  286 TYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             hHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            999999999999999999999999999999988888766533

>KOG3912|consensus

Probab=99.77  E-value=1e-16  Score=134.91  Aligned_cols=291  Identities=14%  Similarity=0.092  Sum_probs=205.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHh-----cCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCC------CCC--CCChh
Q psy14376         17 VSLYWLVSIITVFVNKALLS-----ELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFP------TGN--PFRLN   83 (327)
Q Consensus        17 ~~~~~~~s~~~~~~~k~~l~-----~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p------~~~--~~~~~   83 (327)
                      ..+...++...+++.||.-+     .-+|++|..-+..-++.-+..+..+...+++...+-...      +++  |++  
T Consensus         8 s~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~--   85 (372)
T KOG3912|consen    8 SLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN--   85 (372)
T ss_pred             hhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC--
Confidence            34455566667778899865     234777775544444443344444444333221110000      001  232  


Q ss_pred             hHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccC----
Q psy14376         84 TLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQE----  159 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~----  159 (327)
                       .+.+++++++......+.+.+|.+++++.+|+++....+|+.+++.-++|++++.++|+++....+|++++...+    
T Consensus        86 -p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~  164 (372)
T KOG3912|consen   86 -PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLV  164 (372)
T ss_pred             -cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccc
Confidence             345677899998899999999999999999999999999999999999999999999999999999998843221    


Q ss_pred             --C-cCcccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHc-----Ccccccccccc
Q psy14376        160 --D-LAGSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLF-----GELKTVQDYAD  231 (327)
Q Consensus       160 --~-~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~  231 (327)
                        . .+.+.-..|+++.+.+.+.-|...++.+|.+++++.+|.+...|..++|..++-......     ++..+--....
T Consensus       165 ~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~  244 (372)
T KOG3912|consen  165 TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGV  244 (372)
T ss_pred             cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcc
Confidence              1 111334579999999999999999999999999999999999999999965543332221     11111000000


Q ss_pred             cchhHH---------HHHHHHHHHH-H-HHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHH
Q psy14376        232 LNTAYF---------WLFLPIGGLC-G-FAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWV  300 (327)
Q Consensus       232 ~~~~~~---------~~~~~~~~~~-~-~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~l  300 (327)
                      +.|+..         ...+...+.. + .+.|+......|..++++..++..+|+....++++....|.+...|+.|+.+
T Consensus       245 ~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFli  324 (372)
T KOG3912|consen  245 LEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLI  324 (372)
T ss_pred             hhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence            111100         1112222222 2 2356677778899999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhhh
Q psy14376        301 VLFGSAAYTF  310 (327)
Q Consensus       301 ii~g~~l~~~  310 (327)
                      .+.|..+|+.
T Consensus       325 Li~Gi~lY~~  334 (372)
T KOG3912|consen  325 LIMGIILYNQ  334 (372)
T ss_pred             HHHHHHHHHH
Confidence            9999999874

>KOG1583|consensus

Probab=99.72  E-value=1.5e-17  Score=139.67  Aligned_cols=260  Identities=17%  Similarity=0.209  Sum_probs=188.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHH-HhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhcccccc-cchhHHHHHHH
Q psy14376         42 APLFITWFQCVISAFLCIFLH-IFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKN-VGVSFYYIGRS  119 (327)
Q Consensus        42 ~p~~l~~~r~~~~~~~l~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~~  119 (327)
                      ....+++.|+++-..-=++.. -+...++   +.|         .|+++.....+......+|.++++ +|.+...++++
T Consensus        32 sgNLITFaqFlFia~eGlif~skf~~~k~---kip---------lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRs   99 (330)
T KOG1583|consen   32 SGNLITFAQFLFIATEGLIFTSKFFTVKP---KIP---------LKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRS   99 (330)
T ss_pred             CeeehHHHHHHHHHHhceeeeccccccCC---CCc---------hhhhheehheeeeeeeeccceeeecccceEEEEEec
Confidence            557789999775544333222 1222111   333         567777777778888999999999 59999999999


Q ss_pred             HHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCC----c-------C-c--c-cc-hhHHHHHHHHHHHHHHH
Q psy14376        120 LTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQED----L-------A-G--S-FS-ISGTVYGVIASASLALY  183 (327)
Q Consensus       120 ~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~----~-------~-~--~-~~-~~G~~~~l~s~~~~a~~  183 (327)
                      ..++-+++.+++++|+|++.+|+.++++..+|+++.+....    .       + +  + .. ..|+.+...|.+..|..
T Consensus       100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m  179 (330)
T KOG1583|consen  100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM  179 (330)
T ss_pred             CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998332211    0       0 0  1 11 35888888999999999


Q ss_pred             HHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCccccc----cccc-------ccchhHHHHHHHHHHHHHHHHH
Q psy14376        184 SIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTV----QDYA-------DLNTAYFWLFLPIGGLCGFAIG  252 (327)
Q Consensus       184 ~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~~~~~~~~~  252 (327)
                      .++++..++|++.++-|.++|+-..+.+..+...   +|..+-    .+.+       ...-+..|..++..++..++.-
T Consensus       180 giyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~---~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~Ci  256 (330)
T KOG1583|consen  180 GIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMG---DDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCI  256 (330)
T ss_pred             HHHHHHHHHHhcCChHHHHHHHHHhccchHHHhc---chHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998777765544321   111111    1110       0112344555554444444332


Q ss_pred             HHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchhH
Q psy14376        253 YVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREM  316 (327)
Q Consensus       253 ~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~~  316 (327)
                      =..+.....+++.++++...+|...+.++|++.|++++++.+|+|..++..|..+|....++++
T Consensus       257 kgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~  320 (330)
T KOG1583|consen  257 KGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPK  320 (330)
T ss_pred             HhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence            2234456788899999999999999999999999999999999999999999999886544444

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.64  E-value=2.8e-15  Score=121.07  Aligned_cols=142  Identities=27%  Similarity=0.340  Sum_probs=124.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC-----CCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccc-----cc-hhHH
Q psy14376        169 GTVYGVIASASLALYSIHTKKVLPC-----VNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYAD-----LN-TAYF  237 (327)
Q Consensus       169 G~~~~l~s~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~  237 (327)
                      |.++++.|.++.|++.++.|+..++     .+.++.++.+|+++.+.+.++|.+...|++........     .. +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999999888     46799999999999999999999998865542221111     11 4456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        238 WLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      +..++..|+++++.++..+..+++++|++.++.+.++.+..++.|+++|||++|..+++|.++.+.|..+|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            7778889999999999999999999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2766|consensus

Probab=99.47  E-value=2.9e-14  Score=118.79  Aligned_cols=259  Identities=14%  Similarity=0.132  Sum_probs=186.1

Q ss_pred             HHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhccccccc
Q psy14376         30 VNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNV  109 (327)
Q Consensus        30 ~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  109 (327)
                      .+.+.-. .+.|.|..=+|.....-.++-.++..++++.            -.-.|++++++++...-.+.+-..+.+|+
T Consensus        36 tss~la~-k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~------------~~~~~~hYilla~~DVEaNy~vV~AyQyT  102 (336)
T KOG2766|consen   36 TSSELAR-KGINAPTSQTFLNYVLLALVYGPIMLFRRKY------------IKAKWRHYILLAFVDVEANYFVVKAYQYT  102 (336)
T ss_pred             hhHHHHh-ccCCCccHHHHHHHHHHHHHHhhHHHhhhHH------------HHHHHHHhhheeEEeecccEEEeeehhhc
Confidence            3455443 3566788878877777666666666554421            11236667777766665666666789999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccC-----CcCcccchhHHHHHHHHHHHHHHHH
Q psy14376        110 GVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQE-----DLAGSFSISGTVYGVIASASLALYS  184 (327)
Q Consensus       110 ~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~-----~~~~~~~~~G~~~~l~s~~~~a~~~  184 (327)
                      +....+.+-+...+.+.+++|+++|.|++..++.|++++..|+++++..+     ..++++...|+.++++++.+||..+
T Consensus       103 smtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSN  182 (336)
T KOG2766|consen  103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSN  182 (336)
T ss_pred             chHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeecc
Confidence            99999999999999999999999999999999999999999999854432     2334556689999999999999999


Q ss_pred             HHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHHH-HHHHHhcc
Q psy14376        185 IHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVT-TLQIKITS  263 (327)
Q Consensus       185 v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  263 (327)
                      +..+.+.++  .+..+++....++|+++..+-...  |....... +| +...... +. ..+.-++-|+. -..+|..+
T Consensus       183 v~EEflvkn--~d~~elm~~lgLfGaIIsaIQ~i~--~~~~~~tl-~w-~~~i~~y-l~-f~L~MFllYsl~pil~k~~~  254 (336)
T KOG2766|consen  183 VSEEFLVKN--ADRVELMGFLGLFGAIISAIQFIF--ERHHVSTL-HW-DSAIFLY-LR-FALTMFLLYSLAPILIKTNS  254 (336)
T ss_pred             ccHHHHHhc--CcHHHHHHHHHHHHHHHHHHHHhh--hccceeeE-ee-hHHHHHH-HH-HHHHHHHHHHhhHHheecCC
Confidence            999998885  478899999999999998887433  32222221 12 1111111 11 11222233433 35678888


Q ss_pred             hhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhc
Q psy14376        264 PLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       264 a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~  311 (327)
                      ++..++.-......+.++  ..||-+.+|...+.+..+..|.++|..+
T Consensus       255 aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  255 ATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             ceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            887776666666666665  6688889999999999999999998643

>TIGR00803 nst UDP-galactose transporter

Probab=99.32  E-value=1.9e-11  Score=104.89  Aligned_cols=191  Identities=9%  Similarity=0.081  Sum_probs=128.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheec--------------------cCCc----Ccc
Q psy14376        109 VGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVD--------------------QEDL----AGS  164 (327)
Q Consensus       109 ~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~--------------------~~~~----~~~  164 (327)
                      ++++.....++..|+++++.++...+||++..++++..+...|++....                    ++..    ...
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            4667788899999999999999999999999999999999988874111                    1110    112


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcC----ccccccccc--ccchhHHH
Q psy14376        165 FSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFG----ELKTVQDYA--DLNTAYFW  238 (327)
Q Consensus       165 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~  238 (327)
                      ..+.|....+.+..+.+...++.++..++.+.+     .|...+......+.....+    +........  ...+...|
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW  156 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH
Confidence            345677778888888899999999976654322     4443333333322221111    111111111  11122223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhh
Q psy14376        239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAY  308 (327)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~  308 (327)
                      ..++.    ....+....+.+|+.++.+.++....+++++.++++++|||+++..+++|..+++.|+.+|
T Consensus       157 ~~~~~----~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       157 IVGLL----NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHH----HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            32222    2223334556789999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.30  E-value=4.2e-11  Score=89.64  Aligned_cols=135  Identities=16%  Similarity=0.170  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHH
Q psy14376        169 GTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG  248 (327)
Q Consensus       169 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (327)
                      -.+++++|++++++..++.|--+++  .||..-+.-..+...+++.......|..+..    ..-+...|..++.+|+.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~----~~~~~k~~lflilSGla~   77 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG--VDPDFATTIRTIVILIFLLIVLLVTGNWQAG----GEIGPKSWLFLILSGLAG   77 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHHHHHHHHhcCceecc----cccCcceehhhhHHHHHH
Confidence            3678999999999999999887774  4666666777777777777777777654322    112445577788888777


Q ss_pred             HHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhh
Q psy14376        249 FAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  309 (327)
Q Consensus       249 ~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~  309 (327)
                      -...+..+++++...+..+..++-..+++++++|++++||++|..+|+|+.++++|.++..
T Consensus        78 glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          78 GLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            7777778899999999999999999999999999999999999999999999999998754

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.16  E-value=2.3e-10  Score=88.54  Aligned_cols=115  Identities=23%  Similarity=0.342  Sum_probs=93.3

Q ss_pred             HHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHH-HHHHHHhcccccc
Q psy14376         30 VNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILF-MSMISFNNLCLKN  108 (327)
Q Consensus        30 ~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  108 (327)
                      .+|...++  . +|...+++|+..+.+ +.+.....++++    .+   +.+.+++......+.+. .....+.+.++++
T Consensus         9 ~~k~~~~~--~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    9 FSKKLLKK--I-SPLSITFWRFLIAGI-LLILLLILGRKP----FK---NLSPRQWLWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             HHHHHhcc--C-CHHHHHHHHHHHHHH-HHHHHHhhcccc----cc---CCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence            45888875  4 789999999999997 554444433321    11   24555566777777764 6889999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhe
Q psy14376        109 VGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLG  155 (327)
Q Consensus       109 ~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~  155 (327)
                      .+++..+.+.++.|+++.+++++++||+++++++.|+.+++.|+.+.
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999874

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.12  E-value=2.4e-10  Score=87.18  Aligned_cols=106  Identities=14%  Similarity=0.204  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHH-HHHHHhcccccccchhHHHHHHHHHHHHHH
Q psy14376         48 WFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFM-SMISFNNLCLKNVGVSFYYIGRSLTTVFNV  126 (327)
Q Consensus        48 ~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~  126 (327)
                      .+|+..+.+.+..+...+++.++.  .+   +.+++.+......+.+.. .+..+++.|+++.+ +...++.++.|+++.
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~   75 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDL--FR---ALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTA   75 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHH--HH---HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHH
Confidence            467888888887777664432211  11   122333555666677664 88899999999999 588899999999999


Q ss_pred             HHHHHHhcccccchhhHHHHHHhhhhhheeccC
Q psy14376        127 LFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQE  159 (327)
Q Consensus       127 i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~  159 (327)
                      +++++++|||++++++.++.++++|++++..++
T Consensus        76 ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   76 LLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999966544

>KOG4314|consensus

Probab=99.11  E-value=3.4e-10  Score=91.16  Aligned_cols=219  Identities=15%  Similarity=0.137  Sum_probs=154.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcc
Q psy14376         85 LINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGS  164 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~  164 (327)
                      +++..+.+++-.+....+..+++.++++.++.+..+.--|+.+++++.+|+|+...++++.++...|+++....++ +..
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-~~a  131 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-EHA  131 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-hhh
Confidence            4455566666667777888899999999999999999999999999999999999999999999999999775443 345


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHH-----HH-HcCcccccccccccchhHHH
Q psy14376        165 FSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFV-----SG-LFGELKTVQDYADLNTAYFW  238 (327)
Q Consensus       165 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~  238 (327)
                      .++.|+..+++|+...|+|-+.-|+...+.  +--+...+++-.|..=+-..     .+ +.+    +..+++. ...-|
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA--n~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~----VE~~qsF-A~~PW  204 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNA--NFGDAAHFMSCLGFFNLCFISFPALILAFTG----VEHLQSF-AAAPW  204 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccC--cchhHHHHHHHHHHHHHHHHhhhHHHHHHhc----hHHHHHH-hhCCc
Confidence            688999999999999999999999988854  44455556544443321111     11 111    0000000 11126


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhc
Q psy14376        239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~  311 (327)
                      .++...+.+....++..+..+....|...++=+.........+..++-+-..+-....|.+++.+|..+....
T Consensus       205 G~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP  277 (290)
T KOG4314|consen  205 GCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIP  277 (290)
T ss_pred             hhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence            6655555566666666666677777776665544444455556665544456778889999999998876553

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.07  E-value=7e-10  Score=85.85  Aligned_cols=124  Identities=18%  Similarity=0.231  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHH-HHHHHHHH
Q psy14376        178 ASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG-FAIGYVTT  256 (327)
Q Consensus       178 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  256 (327)
                      ++||.+.+..|+..++  .++.....+....+.+ +++.....+..+ .    ...+...+......+.++ ...+...+
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-F----KNLSPRQWLWLLFLGLLGTALAYLLYF   72 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-c----cCCChhhhhhhhHhhccceehHHHHHH
Confidence            4688999999998886  5789999999999998 666666653322 1    111122233344445554 34444556


Q ss_pred             HHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhh
Q psy14376        257 LQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  309 (327)
Q Consensus       257 ~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~  309 (327)
                      +..++.++...+.+.+++|+.+.++++++++|++++.+++|+.+++.|+.+..
T Consensus        73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   73 YALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.05  E-value=2.2e-09  Score=80.50  Aligned_cols=118  Identities=15%  Similarity=0.104  Sum_probs=100.5

Q ss_pred             HHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhccccccc
Q psy14376         30 VNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNV  109 (327)
Q Consensus        30 ~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  109 (327)
                      ..|..+++  . .|.+-++.|.++....+..+...+++.    +.+  .+.+.|.+..+...|+.......+++.+++--
T Consensus        21 F~KIGl~~--v-dp~~At~IRtiVi~~~l~~v~~~~g~~----~~~--~~~~~k~~lflilSGla~glswl~Yf~ALk~G   91 (140)
T COG2510          21 FAKIGLEG--V-DPDFATTIRTIVILIFLLIVLLVTGNW----QAG--GEIGPKSWLFLILSGLAGGLSWLLYFRALKKG   91 (140)
T ss_pred             HHHHhccc--c-CccHHHHHHHHHHHHHHHHHHHhcCce----ecc--cccCcceehhhhHHHHHHHHHHHHHHHHHhcC
Confidence            45999885  4 588899999999999888888766543    222  23667778878788877788999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhee
Q psy14376        110 GVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGV  156 (327)
Q Consensus       110 ~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  156 (327)
                      ++|...-+-.++|+++.+++++++|||++.++|+|+++..+|++++.
T Consensus        92 ~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          92 KASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             CcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999998754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.84  E-value=1.7e-07  Score=82.28  Aligned_cols=133  Identities=15%  Similarity=0.035  Sum_probs=98.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHH
Q psy14376          7 VSRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLI   86 (327)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~   86 (327)
                      ........+++.+|...+..    .|...++.+. .+......|+.++.+.+.+.....++      .+.   .+.+++.
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~----~k~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~---~~~~~~~  192 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVL----YKRLVKKEGP-ELLQFTGWVLLLGALLLLPFAWFLGP------NPQ---ALSLQWG  192 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHH----HhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHhcCC------CCC---cchHHHH
Confidence            34555566677777776664    4777765432 24455557888888877766554321      111   3444555


Q ss_pred             HHHHHHHHH-HHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhh
Q psy14376         87 NVLPLSILF-MSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFW  153 (327)
Q Consensus        87 ~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~  153 (327)
                      .....+++. .....+++.++++.+++.++++.++.|++.++++++++||+++..++.|..+.+.|+.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       193 ALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            556566654 5788889999999999999999999999999999999999999999999999999863

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.82  E-value=1.2e-07  Score=84.37  Aligned_cols=133  Identities=12%  Similarity=0.060  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHH
Q psy14376        170 TVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF  249 (327)
Q Consensus       170 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (327)
                      .++.+++++++|...+.+|+..+++  ++  ...+....+.+.++|+......... +.   ..+...+..++..+....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PD--FLWWALLAHSVLLTPYGLWYLAQVG-WS---RLPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hH--HHHHHHHHHHHHHHHHHHHhcccCC-CC---CcchhhHHHHHHHHHHHH
Confidence            5688999999999999999887753  23  3455556666677776654311111 11   111222444455555555


Q ss_pred             HHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        250 AIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       250 ~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      ...+..++..++.++...+.+.+..|+++.+++++++||+++..+++|..+++.|+.+...
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            5566667788999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.79  E-value=6.8e-07  Score=79.74  Aligned_cols=216  Identities=15%  Similarity=0.108  Sum_probs=119.3

Q ss_pred             HHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhee-ccCCcCcccch------
Q psy14376         95 FMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGV-DQEDLAGSFSI------  167 (327)
Q Consensus        95 ~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~-~~~~~~~~~~~------  167 (327)
                      +..+...+..++.+.|++..+-+.+...++.++++..++|||++++++.|+.+++.|..++. ..+..++..+.      
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~  139 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIAL  139 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHH
Confidence            45666788889999999999999999999999999999999999999999999999998732 22211111110      


Q ss_pred             ---hH-HHHHHH-HHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccc-cccccccchhHHHHHH
Q psy14376        168 ---SG-TVYGVI-ASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKT-VQDYADLNTAYFWLFL  241 (327)
Q Consensus       168 ---~G-~~~~l~-s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  241 (327)
                         .+ +.+... ..+...+.....+|..++   +..--.....+.|+...+..=........ ....+...++..|..+
T Consensus       140 ~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~---~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~  216 (300)
T PF05653_consen  140 LSQPGFLVYFILVLVLILILIFFIKPRYGRR---NILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLL  216 (300)
T ss_pred             hcCcceehhHHHHHHHHHHHHHhhcchhccc---ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHH
Confidence               01 111111 111122222122221111   11111111112222111110000000000 0000122344455554


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcchhhHHhhh-cchHHHHHHHHHHHhCCc--cchh----hhhHHHHHHhhhhhhhhccc
Q psy14376        242 PIGGLCGFAIGYVTTLQIKITSPLTHNISG-TAKACAQTVIASYWYNEV--KPFL----WWVSNWVVLFGSAAYTFVKQ  313 (327)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~v~~~i~~~~~~~e~--~~~~----~~iG~~lii~g~~l~~~~~~  313 (327)
                      +....+...--+..+++.++.+++....+. ..-...+++-|.++|+|-  .+..    ...|+.+++.|+.+....|+
T Consensus       217 ~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  217 LVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence            444444444455678899988887544433 344566777788899985  3443    44688889999988765443

>TIGR00688 rarD rarD protein

Probab=98.79  E-value=1.2e-07  Score=83.05  Aligned_cols=139  Identities=12%  Similarity=0.072  Sum_probs=103.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccc-cccccchhHHHHHHHHHHH
Q psy14376        168 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQ-DYADLNTAYFWLFLPIGGL  246 (327)
Q Consensus       168 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  246 (327)
                      .|.++.++++++|+...+..|. ..  +.++.++.++.++++.+.+++.....++..... +.........+......|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            4889999999999999999997 44  368999999999999988777665543221110 0011111112333445555


Q ss_pred             HHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhh
Q psy14376        247 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  309 (327)
Q Consensus       247 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~  309 (327)
                      +....+...+...+++++...+.+.+..|+++.+++.++++|+++..+++|..+.+.|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            444445555677899999999999999999999999999999999999999999999988654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.79  E-value=1.6e-07  Score=84.22  Aligned_cols=140  Identities=8%  Similarity=0.023  Sum_probs=104.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHH
Q psy14376        165 FSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIG  244 (327)
Q Consensus       165 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (327)
                      ....|.++.++++++|+...+..|.. .  +.++.++..+...++.+.+++.....++..+...  ...+...+......
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   79 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKT--LIQTPQKIFMLAVS   79 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH--HHcCHHHHHHHHHH
Confidence            34579999999999999999999764 4  3689999999999999888776655432211110  01122222222233


Q ss_pred             HHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhh
Q psy14376        245 GLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  309 (327)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~  309 (327)
                      ++.....+...++.+++.++...+++.+..|++..+++.++++|+++..+++|.++.+.|+.+..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            33333334455788999999999999999999999999999999999999999999999998754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.74  E-value=3.6e-06  Score=72.95  Aligned_cols=212  Identities=14%  Similarity=0.059  Sum_probs=138.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhh----HHHHHHhhhhhheec
Q psy14376         83 NTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSAC----VCCGIIVMGFWLGVD  157 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~----~~~~l~~~Gv~l~~~  157 (327)
                      +.+..-+..|++-...+..++.+.++..+|.+-=+ ...+-+.+.+.++++++|--+..++    .++++.++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            55555666777777888889899998888766544 4677888999999999998777665    477888889988655


Q ss_pred             cCCcCc-----ccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCccccccccccc
Q psy14376        158 QEDLAG-----SFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADL  232 (327)
Q Consensus       158 ~~~~~~-----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  232 (327)
                      .+..++     +....|+...+.+.+.|..|.+..|-.    +.++++..+=+.+--.+....+....  .++..+.   
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~--~~~~~~k---  193 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFS--KKPFFEK---  193 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcc--ccccccc---
Confidence            443222     233469999999999999999887652    34676666655443333233333322  1111111   


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchh----hhhHHHHHHhhhhh
Q psy14376        233 NTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFL----WWVSNWVVLFGSAA  307 (327)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~----~~iG~~lii~g~~l  307 (327)
                         ..|.- +..|++=...+.......+..+..+.-.+..+..+.+++.|++++||+-+..    .++|.++++.|.++
T Consensus       194 ---~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  194 ---KSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             ---chHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence               11221 1222221222333334455556555555677889999999999999998865    44688888887754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.58  E-value=1.6e-06  Score=79.51  Aligned_cols=138  Identities=12%  Similarity=0.075  Sum_probs=108.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHH
Q psy14376        168 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLC  247 (327)
Q Consensus       168 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (327)
                      .-...++...++|+.+.++.|..++. +.++.....+...+++++++|++...+.....    ...+...|..+...|++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~----~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSK-GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL----PPLSVSILSKIGLLGFL   87 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHC-CCCccHHHHHHHHHHHHHHHHHHHHHHHhccc----CcchHHHHHHHHHHHHH
Confidence            34677888999999999999998865 78999999999999999999887764221111    11122234555566666


Q ss_pred             HHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHH------hCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        248 GFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYW------YNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       248 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~------~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      ++..+...+...++++|...+++.++.|+++.++++++      ++|+++..+++|.++.+.|+.+...
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            64334455678899999999999999999999999999      6999999999999999999987553

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.45  E-value=3.3e-06  Score=63.83  Aligned_cols=64  Identities=22%  Similarity=0.098  Sum_probs=59.2

Q ss_pred             HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhee
Q psy14376         93 ILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGV  156 (327)
Q Consensus        93 ~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  156 (327)
                      .++.....++..+++..|.+.+..+.++.|+++.+.+++++|||+++++++|+.+.++|++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3456788899999999999999999999999999999999999999999999999999998754

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.37  E-value=1.6e-05  Score=71.17  Aligned_cols=130  Identities=12%  Similarity=0.065  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHH
Q psy14376         11 VKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLP   90 (327)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~   90 (327)
                      ...+.+..+|...+..    .|...+++   +|..... ...++.+.+.+.......     ..    +.+.+.+...+.
T Consensus       151 ll~l~aa~~~a~~~v~----~r~~~~~~---~~~~~~~-~~~~~~~~l~~~~~~~~~-----~~----~~~~~~~~~~l~  213 (293)
T PRK10532        151 ALALGAGACWAIYILS----GQRAGAEH---GPATVAI-GSLIAALIFVPIGALQAG-----EA----LWHWSILPLGLA  213 (293)
T ss_pred             HHHHHHHHHHHHHHHH----HHHHhccC---CchHHHH-HHHHHHHHHHHHHHHccC-----cc----cCCHHHHHHHHH
Confidence            3444455555554443    36654433   4555544 445555555444432210     01    133443433445


Q ss_pred             HHHHH-HHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheec
Q psy14376         91 LSILF-MSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVD  157 (327)
Q Consensus        91 ~~~~~-~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  157 (327)
                      .+++. .....+++.++++.+++.++.+..+.|++..++++++++|+++..+++|..+.++|++....
T Consensus       214 lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        214 VAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            55554 46777889999999999999999999999999999999999999999999999999988543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.36  E-value=1.7e-05  Score=70.98  Aligned_cols=134  Identities=16%  Similarity=0.072  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHH
Q psy14376          9 RYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINV   88 (327)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~   88 (327)
                      .....+++..+|...+..    +|..-.    +++...+.+++..+...+.+.......     ..+  ...+.+.+...
T Consensus       151 G~l~~l~a~~~~a~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~i  215 (292)
T PRK11272        151 GAILILIASASWAFGSVW----SSRLPL----PVGMMAGAAEMLAAGVVLLIASLLSGE-----RLT--ALPTLSGFLAL  215 (292)
T ss_pred             HHHHHHHHHHHHHHHHHH----HHhcCC----CcchHHHHHHHHHHHHHHHHHHHHcCC-----ccc--ccCCHHHHHHH
Confidence            334445555555555543    344321    134556788888887777665543211     011  01234556566


Q ss_pred             HHHHHHH-HHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheec
Q psy14376         89 LPLSILF-MSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVD  157 (327)
Q Consensus        89 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  157 (327)
                      ...++.. .....+++.++++.+++.++++..+.|++.++++++++||+++..++.|..+.+.|+.+...
T Consensus       216 ~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        216 GYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            6666653 46778899999999999999999999999999999999999999999999999999988544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.28  E-value=3.3e-05  Score=61.96  Aligned_cols=124  Identities=17%  Similarity=0.175  Sum_probs=90.1

Q ss_pred             HHHHHHhc-----CCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCC--CCCC--ChhhHHHHHHHHHHHHHHHH
Q psy14376         30 VNKALLSE-----LKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPT--GNPF--RLNTLINVLPLSILFMSMIS  100 (327)
Q Consensus        30 ~~k~~l~~-----~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~--~~~~--~~~~~~~~~~~~~~~~~~~~  100 (327)
                      +.|..+++     .+. .|..+.+.....+.+++.+........+.......  +.+.  +.+.+..+...+++....+.
T Consensus        18 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~   96 (153)
T PF03151_consen   18 LIKKLLKKVSSNSKKL-NPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNL   96 (153)
T ss_pred             HHHHHHhcccccccCC-CHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence            45666665     466 57888888888888777776654432110000000  0001  22334445556666668888


Q ss_pred             HhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhh
Q psy14376        101 FNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWL  154 (327)
Q Consensus       101 ~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l  154 (327)
                      ..+..++++++-+.+++.....+.+.++++++++|+++.+++.|+++.+.|+.+
T Consensus        97 ~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   97 SSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            888999999999999999999999999999999999999999999999999876

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.25  E-value=3.4e-05  Score=69.08  Aligned_cols=78  Identities=18%  Similarity=0.162  Sum_probs=66.7

Q ss_pred             CChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheec
Q psy14376         80 FRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVD  157 (327)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  157 (327)
                      .+.+.+-.....++.......+++.++++.+++..+.+.++.|++..++++++++|+++..+++|.++.+.|+.+...
T Consensus       210 ~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        210 FSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            445555555555554557888999999999999999999999999999999999999999999999999999987543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.17  E-value=7.9e-05  Score=66.88  Aligned_cols=144  Identities=11%  Similarity=0.064  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHH
Q psy14376          9 RYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINV   88 (327)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~   88 (327)
                      .....+++...|...++..    |...++.+-+...........++.+........... +.....+ ..+.+.+.+...
T Consensus       144 G~~l~l~aal~~a~~~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~l  217 (299)
T PRK11453        144 GFMLTLAAAFSWACGNIFN----KKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDG-SATMIHS-LVTIDMTTILSL  217 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHH----HHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcC-chhhhhh-hccCCHHHHHHH
Confidence            3344555666666655543    554332211122344455555554433332222111 1000000 012445556666


Q ss_pred             HHHHHHH-HHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheecc
Q psy14376         89 LPLSILF-MSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQ  158 (327)
Q Consensus        89 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~  158 (327)
                      +..+++. .....+++.++++.+++.++.+..+.|++..++++++++|+++..+++|..+.++|+.+...+
T Consensus       218 ~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        218 MYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            6666554 367778889999999999999999999999999999999999999999999999999885443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.14  E-value=0.0024  Score=57.83  Aligned_cols=229  Identities=11%  Similarity=0.013  Sum_probs=127.7

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccc---cch----hhHHHHHHhhhh
Q psy14376         81 RLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKT---SFS----ACVCCGIIVMGF  152 (327)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~---s~~----~~~~~~l~~~Gv  152 (327)
                      +.+.+..-+..|++-...+..+..+.++..+|...-+ ..++-+...+...++++|=.   +..    -..++++.++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            3444555556666666778888889999988877644 67788888888888887532   333    357888888999


Q ss_pred             hheec----cCCc-----Cc-ccchhHHHHHHHHHHHHHHHH-------HHHHhhcCCCCCCceehhhhhhH---HHHHH
Q psy14376        153 WLGVD----QEDL-----AG-SFSISGTVYGVIASASLALYS-------IHTKKVLPCVNNEIWLLSYYNNV---YSSII  212 (327)
Q Consensus       153 ~l~~~----~~~~-----~~-~~~~~G~~~~l~s~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~l---~~~~~  212 (327)
                      ++...    .+..     +. .....|+.++++|.+.+++|.       ...+.. .+.+.++.....-+..   .+...
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~~~  227 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGGAI  227 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHHHH
Confidence            88444    2221     11 223579999999999999999       433322 1123344443333332   33332


Q ss_pred             H-HHHHHH---cCcccc-cccccccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHhcc----hhhHHhhhcchHHHHHHH
Q psy14376        213 L-LFVSGL---FGELKT-VQDYADLN--TAYFWLFLPIGGLCGFAIGYVTTLQIKITS----PLTHNISGTAKACAQTVI  281 (327)
Q Consensus       213 ~-~~~~~~---~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----a~~~~~~~~~~~v~~~i~  281 (327)
                      . +.++..   .++..+ ..+.....  -........+.|++=+.-+++.....++.+    .....+.+.+.-+.+.+.
T Consensus       228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence            2 222221   111110 11111100  011122223333222222222222233331    112335446666888999


Q ss_pred             HHHHhCCccc------hhhhhHHHHHHhhhhhhhhc
Q psy14376        282 ASYWYNEVKP------FLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       282 ~~~~~~e~~~------~~~~iG~~lii~g~~l~~~~  311 (327)
                      |+ +++|.-+      ...++|.+++++|..+..+.
T Consensus       308 Gi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        308 GL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            98 5999877      56678999999999876543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.12  E-value=0.00011  Score=67.45  Aligned_cols=139  Identities=12%  Similarity=0.161  Sum_probs=99.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-ceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHH
Q psy14376        166 SISGTVYGVIASASLALYSIHTKKVLPCVNNE-IWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIG  244 (327)
Q Consensus       166 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (327)
                      ++.-..+++.--.+...+++..|...++.  + |+.++.++++.+.+...++... + ..+..+...  ....+..++..
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~~-~-~~~~~~~~~--~~~~~~~llp~  120 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWAT-G-FRKIPRIKS--LKLFLKNFLPQ  120 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHHh-C-CCCCCCCCC--HHHHHHHHHHH
Confidence            33344445544445566677888888754  5 9999999999998766555432 1 111111110  11234555666


Q ss_pred             HHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        245 GLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      |++....+...+..++.++++..+++..++|+++++++.++++|+++..+++|.++++.|+.+...
T Consensus       121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            777766655566788999999999999999999999999999999999999999999999987654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.11  E-value=3.9e-05  Score=58.35  Aligned_cols=105  Identities=15%  Similarity=0.316  Sum_probs=69.4

Q ss_pred             hhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHH-HHHHHHHHHhcchhhHHhhhcchHHHHHHHH
Q psy14376        204 YNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAI-GYVTTLQIKITSPLTHNISGTAKACAQTVIA  282 (327)
Q Consensus       204 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~  282 (327)
                      +...++.+.+.......++..+........+   +...+..|+++... +.......++.++ ..+.+..+.|+++.++|
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~   78 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKP---WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLS   78 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHH
Confidence            3445566666665555444333221111111   22234444454423 3334566777775 67788899999999999


Q ss_pred             HHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        283 SYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       283 ~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      .++++|+++..+++|..++.+|+.+..+.+
T Consensus        79 ~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   79 WLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999877643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.08  E-value=5.1e-05  Score=65.69  Aligned_cols=139  Identities=13%  Similarity=0.088  Sum_probs=105.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHH
Q psy14376        166 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG  245 (327)
Q Consensus       166 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (327)
                      +..|+++++.|-+.|+....+.|-+ ++  .++.++..+..+.+.+.++.........++..+  ...++..+..+..++
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~~~~~l~a   79 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EP--LPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTLLMLALTA   79 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-cc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHHHHHHHHH
Confidence            3469999999999999999888765 42  478899999999999988877777655554443  223444455555544


Q ss_pred             HHHHHHHHHH-HHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        246 LCGFAIGYVT-TLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       246 ~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      ..-.. |+.. .|+..+......+.=-+..|++.++.|.++++|+++..|++...+..+|+....+
T Consensus        80 ~li~~-nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          80 LLIGL-NWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHH-HHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            43332 4443 4667777777778777899999999999999999999999999999999976543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.03  E-value=0.00023  Score=55.24  Aligned_cols=118  Identities=12%  Similarity=0.099  Sum_probs=77.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHH
Q psy14376        168 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLC  247 (327)
Q Consensus       168 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (327)
                      .|.++.+.+.++.+...++.|+-.++.+.  .+....     .. ..... ..             ++  + ..++.|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-----~~-~~~~~-~~-------------~p--~-~~i~lgl~   56 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-----FI-AALLA-FG-------------LA--L-RAVLLGLA   56 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-----HH-HHHHH-Hh-------------cc--H-HHHHHHHH
Confidence            37788999999999999999987775432  111110     00 00000 00             01  0 01344455


Q ss_pred             HHHHHHHH-HHHHHhcchhhHHhhhcchHHHHHHHHHH--HhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        248 GFAIGYVT-TLQIKITSPLTHNISGTAKACAQTVIASY--WYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       248 ~~~~~~~~-~~~~~~~~a~~~~~~~~~~~v~~~i~~~~--~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      ++...+.. ....++.+......+....++...+.++.  ++||++|+.+++|.++++.|+++...
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            55554443 46678888887766666666666667764  89999999999999999999998764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.99  E-value=0.00027  Score=54.79  Aligned_cols=72  Identities=18%  Similarity=0.108  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHH--HhcccccchhhHHHHHHhhhhhheecc
Q psy14376         87 NVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYF--LLAQKTSFSACVCCGIIVMGFWLGVDQ  158 (327)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~--~~~e~~s~~~~~~~~l~~~Gv~l~~~~  158 (327)
                      .+...-+++.....+++.+++..|++.+.-+.+..++.+.+.++.  ++||++|..+++|+.+.++|+.++..+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            444445567899999999999999999999999999889888885  799999999999999999999996643

>KOG2922|consensus

Probab=97.96  E-value=0.00022  Score=62.59  Aligned_cols=221  Identities=14%  Similarity=0.079  Sum_probs=125.9

Q ss_pred             HHHHHHH-HHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccCCcCcc-c
Q psy14376         88 VLPLSIL-FMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQEDLAGS-F  165 (327)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~~~~~~-~  165 (327)
                      +++.|++ +..+-..++.|..+.|++..+-+.+++.+..++++..++|||++....+|+.++++|-.+++....++.+ .
T Consensus        66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~  145 (335)
T KOG2922|consen   66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE  145 (335)
T ss_pred             HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccc
Confidence            3344554 4577778888899999999999999999999999999999999999999999999999874432221111 1


Q ss_pred             ch---------hHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHH--cCc--ccccccccc
Q psy14376        166 SI---------SGTV-YGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGL--FGE--LKTVQDYAD  231 (327)
Q Consensus       166 ~~---------~G~~-~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~--~~~~~~~~~  231 (327)
                      +.         .+.+ ++..-.+...+-....|   ++++  ...++.|..+.+.+..+-....  .|.  ...+...++
T Consensus       146 t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~---p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~q  220 (335)
T KOG2922|consen  146 SVEEVWELATEPGFLVYVIIIILIVLILIFFYA---PRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQ  220 (335)
T ss_pred             cHHHHHHHhcCccHHHHHHHHHHHHHHHheeec---cccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcc
Confidence            10         1111 11111111111111112   2222  2344555544444421111000  000  000011112


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhh-cchHHHHHHHHHHHhCCc--cch----hhhhHHHHHHhh
Q psy14376        232 LNTAYFWLFLPIGGLCGFAIGYVTTLQIKITSPLTHNISG-TAKACAQTVIASYWYNEV--KPF----LWWVSNWVVLFG  304 (327)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~v~~~i~~~~~~~e~--~~~----~~~iG~~lii~g  304 (327)
                      ...+..|..++....+...-....+++.+..++..++.+. -+-+.+++..|.+.|+|-  .+.    ....|+..++.|
T Consensus       221 l~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G  300 (335)
T KOG2922|consen  221 LFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLG  300 (335)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhhe
Confidence            2233445544444444443334467888877777554444 445667778888889873  333    355799999999


Q ss_pred             hhhhhhccc
Q psy14376        305 SAAYTFVKQ  313 (327)
Q Consensus       305 ~~l~~~~~~  313 (327)
                      +.+....|+
T Consensus       301 ~flL~~~kd  309 (335)
T KOG2922|consen  301 IFLLHRTKD  309 (335)
T ss_pred             eeEeeeecc
Confidence            998765443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.84  E-value=0.00048  Score=61.91  Aligned_cols=119  Identities=13%  Similarity=0.096  Sum_probs=83.8

Q ss_pred             HHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy14376        184 SIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTLQIKITS  263 (327)
Q Consensus       184 ~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (327)
                      +++.|...++. ..|......+...+.+...+... .+..++ .   . .+...|..++..|++........+...++++
T Consensus        18 ~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~-~---~-~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s   90 (302)
T TIGR00817        18 NIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-SGLPKR-L---K-ISSALLKLLLPVAIVHTIGHVTSNVSLSKVA   90 (302)
T ss_pred             HHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-hCCCCC-C---C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            34557666643 36888888888887766554421 111111 1   1 1122244445555565444455678899999


Q ss_pred             hhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhh
Q psy14376        264 PLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  309 (327)
Q Consensus       264 a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~  309 (327)
                      +...+++..+.|+++.+++.++++|+++..++.|..+++.|+.+..
T Consensus        91 ~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        91 VSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999999999999999997653

specificities overlap.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.69  E-value=0.00053  Score=61.23  Aligned_cols=132  Identities=9%  Similarity=0.026  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHH
Q psy14376        169 GTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG  248 (327)
Q Consensus       169 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (327)
                      |++++++++++|+...+..|+..   +.++.+..  ...++............+++       ..+...+..-..+|+.=
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~g~l~G~~w   69 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLPE-------FWALSIFLVGLLSGAFW   69 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCCc-------ccccHHHHHHHHHHHHH
Confidence            57889999999999999998864   33443443  23445554444333332211       11223333333333332


Q ss_pred             HHHHHHHHHHHHhcchhhHHhhhc-chHHHHHHHHHHHhCCccchhh----hhHHHHHHhhhhhhhhcc
Q psy14376        249 FAIGYVTTLQIKITSPLTHNISGT-AKACAQTVIASYWYNEVKPFLW----WVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       249 ~~~~~~~~~~~~~~~a~~~~~~~~-~~~v~~~i~~~~~~~e~~~~~~----~iG~~lii~g~~l~~~~~  312 (327)
                      ...|+..+..+++.+.+....+.+ +.++.+.+++.+++||+.+..+    ++|.++++.|+.+....+
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            234566667788888876655555 7778899999999999999999    999999999998876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.67  E-value=0.00075  Score=60.69  Aligned_cols=129  Identities=13%  Similarity=0.153  Sum_probs=88.9

Q ss_pred             HHHHHHHHHhhcCCCCCC--ceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q psy14376        180 LALYSIHTKKVLPCVNNE--IWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGFAIGYVTTL  257 (327)
Q Consensus       180 ~a~~~v~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (327)
                      +..+.+.+|++.++....  +.-+++.|.....+...+.........+     .......+   ...+++-.......+.
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~   83 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS-----RKIPLKKY---AILSFLFFLASVLSNA   83 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC-----CcChHHHH---HHHHHHHHHHHHHHHH
Confidence            334556778887765545  6677777777777666555544430000     00111112   2333444445566677


Q ss_pred             HHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccchhH
Q psy14376        258 QIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQREM  316 (327)
Q Consensus       258 ~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~~~  316 (327)
                      ..++.+-.+..+....+++...+++.++++++.+..++++..++.+|+..+...+..+.
T Consensus        84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            78888888889999999999999999999999999999999999999999887654433

; GO: 0055085 transmembrane transport

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.65  E-value=0.001  Score=60.10  Aligned_cols=140  Identities=9%  Similarity=0.077  Sum_probs=93.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHH
Q psy14376        168 SGTVYGVIASASLALYSIHTKKVLPCVNN-EIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL  246 (327)
Q Consensus       168 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (327)
                      .+.+++-.-++|-+...+....+.++ +. .|...+++......++..+........+......   ....|.. +..++
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~---~~~~w~y-~lla~   87 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVL---KRPWWKY-FLLAL   87 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhc---chhHHHH-HHHHH
Confidence            35555555556666666666555554 33 3555555555554444444433321111111110   0112332 34466


Q ss_pred             HHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        247 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       247 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      +=...+|..+.+.++++.+..+++.....+++.++++++++++.++.+++|+.+.++|+.+.....
T Consensus        88 ~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   88 LDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            767789999999999999999999999999999999999999999999999999999998776543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.64  E-value=0.00027  Score=53.84  Aligned_cols=57  Identities=7%  Similarity=-0.036  Sum_probs=45.0

Q ss_pred             HHHHHhcchh-hHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        256 TLQIKITSPL-THNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       256 ~~~~~~~~a~-~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      .+..++.+.. .+++..-+..+..+++|+++|||++|+.+++|..++++|+...+...
T Consensus        48 s~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         48 SFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3445555444 45666666778888999999999999999999999999998876544

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.62  E-value=0.0011  Score=50.03  Aligned_cols=54  Identities=11%  Similarity=-0.040  Sum_probs=46.0

Q ss_pred             HHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhh
Q psy14376        256 TLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  309 (327)
Q Consensus       256 ~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~  309 (327)
                      ....++.+....-.+..+.++.+.++|+++|||++|+.+++|.++++.|+.+..
T Consensus        55 ~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         55 LLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            456777777766555669999999999999999999999999999999997653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.58  E-value=0.0003  Score=53.65  Aligned_cols=69  Identities=17%  Similarity=0.258  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhee
Q psy14376         88 VLPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGV  156 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  156 (327)
                      .....+++.....+...+++++|.+.+-.+ ....-+.+.+.+++++||+++..+++++.+.++|++.+-
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence            445566678899999999999999998877 578999999999999999999999999999999998753

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.56  E-value=0.0032  Score=55.69  Aligned_cols=141  Identities=14%  Similarity=0.037  Sum_probs=91.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHH
Q psy14376        166 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGG  245 (327)
Q Consensus       166 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (327)
                      ...+....+..++.|+......|+..++ ..+...........+.....+.....  .....  ....+  .+...+..+
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~--~~~~~~~~~   77 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLE--PRGLR--PALRP--WLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhh--ccccc--ccccc--hHHHHHHHH
Confidence            3457778888889999999988887664 23444444445555554422222111  10011  01111  122223333


Q ss_pred             HHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHH-HHhCCccchhhhhHHHHHHhhhhhhhhccc
Q psy14376        246 LCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIAS-YWYNEVKPFLWWVSNWVVLFGSAAYTFVKQ  313 (327)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~-~~~~e~~~~~~~iG~~lii~g~~l~~~~~~  313 (327)
                      +.....++..+..++++++...+.+.+..|++..+++. ++++|+++..++.|..+.+.|+.+......
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence            33333344445668899999999999999999999996 777999999999999999999998776444

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.43  E-value=0.00085  Score=50.45  Aligned_cols=68  Identities=15%  Similarity=0.144  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhee
Q psy14376         89 LPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGV  156 (327)
Q Consensus        89 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  156 (327)
                      ...-+++.....+...+++..|.+.+-.+ ....-+.+.+.+++++||+++..++.|+.+.++|+++.-
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            34455677888888899999999998877 568889999999999999999999999999999999853

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.32  E-value=0.0011  Score=48.99  Aligned_cols=69  Identities=14%  Similarity=0.115  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhe
Q psy14376         87 NVLPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLG  155 (327)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~  155 (327)
                      .....-+.+.....+...++|++|.+.+-.+ .....+.+.+.+++++||+.+..+++++.+.++|++..
T Consensus        32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            3444555677888888899999999876554 78889999999999999999999999999999999874

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.31  E-value=0.0057  Score=48.10  Aligned_cols=131  Identities=15%  Similarity=0.222  Sum_probs=88.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHHH
Q psy14376        170 TVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCGF  249 (327)
Q Consensus       170 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (327)
                      .++++.++.+-+......-++.++.+ +++.-.+.+...+.+.+.......++. +..   ...+...|.+  .+|+++.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~---~~~~~p~w~~--lGG~lG~   75 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLA---SLSSVPWWAY--LGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccc---hhccCChHHh--ccHHHHH
Confidence            46777888888888877777766654 688889999999999888888777543 222   2222222432  4677777


Q ss_pred             HHHHHHHHHHHhcchhhHHhhh-cchHHHHHHHHHH-Hh---CCccchhhhhHHHHHHhhhhh
Q psy14376        250 AIGYVTTLQIKITSPLTHNISG-TAKACAQTVIASY-WY---NEVKPFLWWVSNWVVLFGSAA  307 (327)
Q Consensus       250 ~~~~~~~~~~~~~~a~~~~~~~-~~~~v~~~i~~~~-~~---~e~~~~~~~iG~~lii~g~~l  307 (327)
                      ..-+......++.++....... .-+-+.+.+++.+ +|   ++++++..++|..+++.|+.+
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6666666667777777544433 3344555555654 22   467899999999999999853

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.25  E-value=0.0014  Score=49.26  Aligned_cols=55  Identities=4%  Similarity=-0.007  Sum_probs=44.2

Q ss_pred             HHHHhcchh-hHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhc
Q psy14376        257 LQIKITSPL-THNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       257 ~~~~~~~a~-~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~  311 (327)
                      +..++.+.. .+++..-+..+.+++.|+++|||++|+.+++|+.+++.|++..+..
T Consensus        49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            445555544 4666666677888999999999999999999999999999987653

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.25  E-value=0.0018  Score=48.55  Aligned_cols=68  Identities=10%  Similarity=0.108  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhe
Q psy14376         88 VLPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLG  155 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~  155 (327)
                      .......+.....+...+++++|.+.+-.+ .....+.+.+.+++++||+++..++.++.+.+.|++..
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            444455667788888899999999887655 56888999999999999999999999999999999863

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.23  E-value=0.0011  Score=59.18  Aligned_cols=119  Identities=14%  Similarity=0.089  Sum_probs=81.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHH
Q psy14376        165 FSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIG  244 (327)
Q Consensus       165 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (327)
                      ....|+.+++.|+++.+...+++||-..|.+.+..+-.  .                +.     .+...++.+|..++..
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~----------------~~-----~~~l~~~~W~~G~~~~   60 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--S----------------GG-----RSYLRRPLWWIGLLLM   60 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--c----------------hh-----hHHHhhHHHHHHHHHH
Confidence            35679999999999999999999986665432111000  0                00     0011223334333222


Q ss_pred             HHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        245 GLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                       .++...+   +.++...+++..+.++.+.-+.+.+++..+++|+++..+++|..+++.|..+...
T Consensus        61 -~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   61 -VLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             -hcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence             2333333   3356777888889999999999999999999999999999999999999986553

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.19  E-value=0.0022  Score=47.78  Aligned_cols=68  Identities=15%  Similarity=0.128  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhe
Q psy14376         88 VLPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLG  155 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~  155 (327)
                      ....-.++.....+...+++.+|.+.+-.+ .....+.+.+.+++++||++++.+++++.+.+.|++..
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            334455677888888899999999887655 56889999999999999999999999999999999874

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.06  E-value=0.0056  Score=45.84  Aligned_cols=55  Identities=11%  Similarity=0.036  Sum_probs=45.6

Q ss_pred             HHHHHHhcchh-hHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhh
Q psy14376        255 TTLQIKITSPL-THNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  309 (327)
Q Consensus       255 ~~~~~~~~~a~-~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~  309 (327)
                      ..+..|+.+.. .+++..-...+.+++.|+++|||++|+.+++|+.+++.|+...+
T Consensus        52 Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         52 LSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34556665554 57777788889999999999999999999999999999998753

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.04  E-value=0.0053  Score=45.68  Aligned_cols=56  Identities=9%  Similarity=-0.022  Sum_probs=46.8

Q ss_pred             HHHHHHhcchh-hHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        255 TTLQIKITSPL-THNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       255 ~~~~~~~~~a~-~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      .....|..+.. .+++..-+..+.+++.|+++|||++|+.+++|+.+++.|++..+.
T Consensus        46 Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         46 LAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            34556665554 678888888899999999999999999999999999999987643

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.00  E-value=0.0047  Score=45.60  Aligned_cols=55  Identities=11%  Similarity=0.118  Sum_probs=45.8

Q ss_pred             HHHHHhcchh-hHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        256 TLQIKITSPL-THNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       256 ~~~~~~~~a~-~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                      .+.+|+.+-. .+++.+-...+.+.+.|+++|||++++.+++|..+++.|++..+.
T Consensus        48 s~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          48 SLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3456665544 577888888889999999999999999999999999999987654

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.95  E-value=0.0028  Score=46.26  Aligned_cols=58  Identities=22%  Similarity=0.241  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHH
Q psy14376         90 PLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGI  147 (327)
Q Consensus        90 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l  147 (327)
                      ....+++....+...+++++|.+.+-.+ .....+.+.+.+.+++||++|..++.++.+
T Consensus        34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            3444677888899999999999988554 679999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.87  E-value=0.0043  Score=53.85  Aligned_cols=76  Identities=11%  Similarity=0.138  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccch
Q psy14376        239 LFLPIGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQR  314 (327)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~  314 (327)
                      ......+++=.+-+...+...++.+|.+.+++...+.+.+.++++++++++++..||++..+...|+.+.......
T Consensus        18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3334555554445666677899999999999999999999999999999999999999999999999987765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.69  E-value=0.017  Score=52.36  Aligned_cols=138  Identities=15%  Similarity=0.030  Sum_probs=79.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHH--HHHHH-HHcCcccccccccccchhHHHHHHH
Q psy14376        166 SISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSII--LLFVS-GLFGELKTVQDYADLNTAYFWLFLP  242 (327)
Q Consensus       166 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  242 (327)
                      ...|+++++++++|++...+-+|| .++.   ++|.. |- ..+.+.  +.|+. -..+. +...+.-...+...+....
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w---~wE~~-W~-v~gi~~wl~~~~~~g~~~~-~~f~~~~~~~~~~~~~~~~   77 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKKW---SWETM-WS-VGGIFSWLILPWLIAALLL-PDFWAYYSSFSGSTLLPVF   77 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCCC---chhHH-HH-HHHHHHHHHHHHHHHHHHh-hhHHHHHHhcCHHHHHHHH
Confidence            356999999999999999998887 4533   34444 43 222221  11211 11112 1111111112333344445


Q ss_pred             HHHHHHHHHHHHHHHHHHhcchh-hHHhhhcchHHHHHHHHHHHhCCcc---c----hhhhhHHHHHHhhhhhhhh
Q psy14376        243 IGGLCGFAIGYVTTLQIKITSPL-THNISGTAKACAQTVIASYWYNEVK---P----FLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~a~-~~~~~~~~~~v~~~i~~~~~~~e~~---~----~~~~iG~~lii~g~~l~~~  310 (327)
                      ++|++=..-|......+++.+-+ ...+..-+..+.+++++.+++||-.   +    ..-.+|.+++++|+.+..+
T Consensus        78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            55544333455555555555544 3444445677888999999999744   3    2355788899999998776

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.64  E-value=0.0005  Score=58.06  Aligned_cols=207  Identities=15%  Similarity=0.059  Sum_probs=122.0

Q ss_pred             HHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhh----HHHHHHhhhhhheeccCCcC--
Q psy14376         90 PLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSAC----VCCGIIVMGFWLGVDQEDLA--  162 (327)
Q Consensus        90 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~----~~~~l~~~Gv~l~~~~~~~~--  162 (327)
                      ..|++-...+..+..+.++.++|.+--+ ..++-+-+.+++++.++|=.+..+.    .++++.+.|+.+....+.++  
T Consensus        64 isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~  143 (288)
T COG4975          64 ISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE  143 (288)
T ss_pred             HhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc
Confidence            3344445677777888999888777544 5567788889999999997666653    56677788888866555321  


Q ss_pred             ---cccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHH
Q psy14376        163 ---GSFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWL  239 (327)
Q Consensus       163 ---~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (327)
                         .++--.|+...+.|.+.|-.|.+..+...    .+.+....-|..-..+.-+.+....+|.        ..+...|.
T Consensus       144 ~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~----v~g~saiLPqAiGMv~~ali~~~~~~~~--------~~~K~t~~  211 (288)
T COG4975         144 EENPSNLKKGIVILLISTLGYVGYVVLFQLFD----VDGLSAILPQAIGMVIGALILGFFKMEK--------RFNKYTWL  211 (288)
T ss_pred             ccChHhhhhheeeeeeeccceeeeEeeecccc----ccchhhhhHHHHHHHHHHHHHhhccccc--------chHHHHHH
Confidence               12223588888889999999998877642    3344444333222222222222222211        11222233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-chhhHHhhhcchHHHHHHHHHHHhCCccchhhh----hHHHHHHhhhhhhhh
Q psy14376        240 FLPIGGLCGFAIGYVTTLQIKIT-SPLTHNISGTAKACAQTVIASYWYNEVKPFLWW----VSNWVVLFGSAAYTF  310 (327)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~----iG~~lii~g~~l~~~  310 (327)
                      - ...|+.=...|.+.+...++. -|+..+ +..+.-+.+++-|+++++|+-|..++    +|.++++.|..+...
T Consensus       212 n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FS-lSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         212 N-IIPGLIWAIGNLFMLLAAQKVGVATSFS-LSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             H-HhhHHHHHhhHHHHHHhhhhhceeeeee-HhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            2 222222122233333333332 333333 33455677888899999999987655    688888888776543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.45  E-value=0.071  Score=45.58  Aligned_cols=57  Identities=11%  Similarity=0.110  Sum_probs=51.7

Q ss_pred             HHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhh
Q psy14376         97 SMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFW  153 (327)
Q Consensus        97 ~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~  153 (327)
                      .-..+...++...|...+.++.+..|.+.++.++++++|.+|..||.++...+.+.+
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            455677789999999999999999999999999999999999999999988877665

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.44  E-value=0.059  Score=47.05  Aligned_cols=119  Identities=16%  Similarity=0.183  Sum_probs=80.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHH
Q psy14376          8 SRYVKITLAVSLYWLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLIN   87 (327)
Q Consensus         8 ~~~~~~~~~~~~~~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~   87 (327)
                      +....+++..+.|+.-+.    +.|+.    +. .|....+-|.+.-.+...++....++      .+    ++++.++.
T Consensus       138 kgi~~Ll~stigy~~Y~~----~~~~~----~~-~~~~~~lPqaiGm~i~a~i~~~~~~~------~~----~~k~~~~n  198 (269)
T PF06800_consen  138 KGILALLISTIGYWIYSV----IPKAF----HV-SGWSAFLPQAIGMLIGAFIFNLFSKK------PF----FEKKSWKN  198 (269)
T ss_pred             hHHHHHHHHHHHHHHHHH----HHHhc----CC-ChhHhHHHHHHHHHHHHHHHhhcccc------cc----cccchHHh
Confidence            344444555555555333    23542    23 57777777766555555544443311      11    33444555


Q ss_pred             HHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHH
Q psy14376         88 VLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCG  146 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~  146 (327)
                      + ..|++......+...+.+.+..+.+-.+.++.++...+.+.+++||+=+++|+....
T Consensus       199 i-l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~  256 (269)
T PF06800_consen  199 I-LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL  256 (269)
T ss_pred             h-HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence            4 668888888888899999999999999999999999999999999999999875443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=96.08  E-value=0.15  Score=43.54  Aligned_cols=67  Identities=13%  Similarity=0.064  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhh
Q psy14376         88 VLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWL  154 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l  154 (327)
                      .....++......+-.+.++|.+...-+....+.++++.+++.++++|+++..++.|+.+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3344444556666777889999999999999999999999999999999999999999999988753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.89  E-value=0.15  Score=40.25  Aligned_cols=136  Identities=15%  Similarity=0.105  Sum_probs=82.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHH
Q psy14376        167 ISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGL  246 (327)
Q Consensus       167 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (327)
                      ++..+..+.++.+-....-..-++.+..+ +|..-...+...|++.+....... +..+-.+. .. +...|.  ..+|+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~-~~-~~pwW~--~~GG~   77 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIK-QGHPGLAA-VA-SAPWWA--WIGGL   77 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhh-cc-CCchHH--HHccc
Confidence            45667778888888887776666655543 677778888888888887777664 32222221 11 111233  34556


Q ss_pred             HHHHHHHHHHHHHHhcchhh-HHhhhcchHHHHHHHHHHHhC----CccchhhhhHHHHHHhhhhhh
Q psy14376        247 CGFAIGYVTTLQIKITSPLT-HNISGTAKACAQTVIASYWYN----EVKPFLWWVSNWVVLFGSAAY  308 (327)
Q Consensus       247 ~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~v~~~i~~~~~~~----e~~~~~~~iG~~lii~g~~l~  308 (327)
                      ++...-+.......+.+++. ......-+.+.+.+++.+=+.    .+++...++|.+++++|+.+.
T Consensus        78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            66655444455556666653 333334444555555544332    468899999999999995443

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.65  E-value=0.8  Score=35.94  Aligned_cols=121  Identities=12%  Similarity=0.125  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhc
Q psy14376         24 SIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNN  103 (327)
Q Consensus        24 s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (327)
                      ...+.-+|-.+-++.+  +|+.-++.-+..+.+.+.++....++. +..+.+       +...+....|++......+..
T Consensus        13 i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~-------~~p~w~~lGG~lG~~~V~~~~   82 (138)
T PF04657_consen   13 IALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRP-SLASLS-------SVPWWAYLGGLLGVFFVLSNI   82 (138)
T ss_pred             HHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhc-------cCChHHhccHHHHHHHHHHHH
Confidence            3333345554444332  588899999999999988887766542 111111       112334446667778888888


Q ss_pred             ccccccchhHHHHHH-HHHHHHHHHHHHH----HhcccccchhhHHHHHHhhhhhh
Q psy14376        104 LCLKNVGVSFYYIGR-SLTTVFNVLFSYF----LLAQKTSFSACVCCGIIVMGFWL  154 (327)
Q Consensus       104 ~~l~~~~~~~~~~l~-~~~pi~~~i~~~~----~~~e~~s~~~~~~~~l~~~Gv~l  154 (327)
                      .....++++....+. .-+-+...++..+    .-|++++++|+.++.+.+.|+.+
T Consensus        83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            888999888777664 4445555666654    35788999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.51  E-value=0.047  Score=39.74  Aligned_cols=46  Identities=11%  Similarity=0.208  Sum_probs=25.2

Q ss_pred             HHHHHhcchh-hHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHH
Q psy14376        256 TLQIKITSPL-THNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVV  301 (327)
Q Consensus       256 ~~~~~~~~a~-~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~li  301 (327)
                      .+..|+.+.. .+.+..-+..+...+.|+++|||++|+.+++|..++
T Consensus        47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            4556666555 456666678889999999999999999999998775

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG4510|consensus

Probab=95.35  E-value=0.015  Score=49.92  Aligned_cols=133  Identities=12%  Similarity=0.122  Sum_probs=78.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHH-HHHHHH
Q psy14376        168 SGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLF-LPIGGL  246 (327)
Q Consensus       168 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  246 (327)
                      +|..+.-+| ..+....+..++....   +|.+......+.-..+..|.....  ...+   ........|++ =-..|.
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~--~~~v---~gp~g~R~~LiLRg~mG~  108 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYY--MQPV---IGPEGKRKWLILRGFMGF  108 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEE--eeee---ecCCCcEEEEEeehhhhh
Confidence            577777777 6667777777776553   455555544222222223322221  1111   01111111221 112233


Q ss_pred             HHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        247 CGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       247 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      .+.+..|..++.+...+|   +++....|+++.++++.+++|+.|..+.+|..+.+.|+++....+
T Consensus       109 tgvmlmyya~~~mslaDA---~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADA---VVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hHHHHHHHHHhhcchhhe---EEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            444444444444444444   566778999999999999999999999999999999999877644

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.29  E-value=0.039  Score=41.46  Aligned_cols=68  Identities=22%  Similarity=0.148  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhh
Q psy14376         86 INVLPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWL  154 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l  154 (327)
                      +..+ .-+++......+++.+...+.|.+.-+ .+++-+++.+.++++.+|..+++.+.|+.+.++|+.+
T Consensus        43 ~y~i-pf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   43 KYII-PFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            4444 344555666677778889999988877 5899999999998888888899999999999999875

Many members are annotated as potential transmembrane proteins.

>KOG2234|consensus

Probab=95.06  E-value=0.66  Score=41.83  Aligned_cols=140  Identities=10%  Similarity=0.016  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCC--CCCceehhhhhhHHHHHHHHHHHHHcCcc---cccccc--cccchhHHHHHHH
Q psy14376        170 TVYGVIASASLALYSIHTKKVLPCV--NNEIWLLSYYNNVYSSIILLFVSGLFGEL---KTVQDY--ADLNTAYFWLFLP  242 (327)
Q Consensus       170 ~~~~l~s~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~  242 (327)
                      .+..+...+-.+......|...+++  +..+....+.+-+.-.++...........   ......  ..+.++....-+.
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            3444445555555555555443332  23455555555555555554444443111   111111  1111221112222


Q ss_pred             HHHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhh
Q psy14376        243 IGGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYT  309 (327)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~  309 (327)
                      ..+++=.+-|...+....+.+|+++++...++...+.++++++++++++..||...++...|+.+..
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            3333333334444567889999999999999999999999999999999999999999999998877

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=94.97  E-value=0.75  Score=38.75  Aligned_cols=109  Identities=7%  Similarity=0.105  Sum_probs=82.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Q psy14376         43 PLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTT  122 (327)
Q Consensus        43 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~p  122 (327)
                      ...-.++..+++..++..+.....++. +....  .+++.+....++..|++-.+...+.-+++.-++...++++.++.-
T Consensus       185 d~dtmfYnNllslPiL~~~s~~~edws-~~n~a--nnl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNK  261 (309)
T COG5070         185 DFDTMFYNNLLSLPILLSFSFLFEDWS-PGNLA--NNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNK  261 (309)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHHhccCC-cchhh--cCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhh
Confidence            455678888888888887776654332 11111  234455556777778877788888889999999999999999999


Q ss_pred             HHHHHHHHHHhcccccchhhHHHHHHhhhhhh
Q psy14376        123 VFNVLFSYFLLAQKTSFSACVCCGIIVMGFWL  154 (327)
Q Consensus       123 i~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l  154 (327)
                      ...++.+.++++|+.++..+.++++++...++
T Consensus       262 lp~alaGlvffdap~nf~si~sillGflsg~i  293 (309)
T COG5070         262 LPIALAGLVFFDAPVNFLSIFSILLGFLSGAI  293 (309)
T ss_pred             ChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999988888887765555

>KOG1441|consensus

Probab=94.18  E-value=0.096  Score=47.00  Aligned_cols=128  Identities=13%  Similarity=0.242  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHh--cCCCChhHHHHHHHHHHHHHHHH-HHHHhhhccCcccc-CCCCCCCChhhHHHHHHHHHHHHHHH
Q psy14376         24 SIITVFVNKALLS--ELKLDAPLFITWFQCVISAFLCI-FLHIFSLFFPNILT-FPTGNPFRLNTLINVLPLSILFMSMI   99 (327)
Q Consensus        24 s~~~~~~~k~~l~--~~~~~~p~~l~~~r~~~~~~~l~-~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~   99 (327)
                      ...-.+..|..+.  +++. .+..+...+.-.+...+. ++...... ++... ..  .+++.+ .-.....++++...+
T Consensus       175 ~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~-~~~~~~~~--~~~~~~-~~~~~~~sv~~f~~N  249 (316)
T KOG1441|consen  175 FALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEG-NKFVGFLT--APWFVT-FLILLLNSVLAFLLN  249 (316)
T ss_pred             HHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhcc-cceeeeec--cccchh-hHHHHHHHHHHHHHH
Confidence            3333345566663  4566 478888888777777777 65443211 10000 00  123333 233344456666777


Q ss_pred             HHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhee
Q psy14376        100 SFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGV  156 (327)
Q Consensus       100 ~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~  156 (327)
                      ...+..+..+++-++++.....=+.+...++++++|+.++.+.+|..+.++|+.+-.
T Consensus       250 ls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  250 LSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            888889999999999999999999999999999999999999999999999998843

>KOG1581|consensus

Probab=94.11  E-value=0.88  Score=40.16  Aligned_cols=119  Identities=14%  Similarity=0.134  Sum_probs=82.9

Q ss_pred             HHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhcccccccch
Q psy14376         32 KALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNVGV  111 (327)
Q Consensus        32 k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  111 (327)
                      +.++.+.+. .+..+.+.-.+...++-.......+-......+-+   -.++-++++++.+.+...++.+-+.-++--.+
T Consensus       192 d~lf~~~k~-s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~---~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGs  267 (327)
T KOG1581|consen  192 DSLFKKYKV-SSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK---EHPDVAFDILLYSTCGAVGQLFIFYTIERFGS  267 (327)
T ss_pred             HHHhccCCc-cHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH---cChhHHHHHHHHHHhhhhhhheehhhHhhccc
Confidence            445555566 46666555555555555444332221111112211   33556788999999998888887777777777


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhh
Q psy14376        112 SFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWL  154 (327)
Q Consensus       112 ~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l  154 (327)
                      -+.+++..+-=++.+.++.+.++++++..+|.|+.+.+.|+.+
T Consensus       268 lt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  268 LTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            7778888888899999999999999999999999988888766

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.02  E-value=0.022  Score=48.38  Aligned_cols=131  Identities=8%  Similarity=-0.006  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHHHHHHH
Q psy14376        169 GTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPIGGLCG  248 (327)
Q Consensus       169 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (327)
                      .++.+++=++.|+.......|.-.    +|.+...-+.+-+.++.+...++. ++       .. ....+..-..+|.+=
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG----~p~qQ~lGtT~GALifaiiv~~~~-~p-------~~-T~~~~iv~~isG~~W   69 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG----KPYQQTLGTTLGALIFAIIVFLFV-SP-------EL-TLTIFIVGFISGAFW   69 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC----ChhHhhhhccHHHHHHHHHHheee-cC-------cc-chhhHHHHHHhhhHh
Confidence            467788888999987766655432    455555544333333333222221 11       11 112233333444433


Q ss_pred             HHHHHHHHHHHHhcchhhHHh-hhcchHHHHHHHHHHHhCCccchhhh-hH---HHHHHhhhhhhhhcc
Q psy14376        249 FAIGYVTTLQIKITSPLTHNI-SGTAKACAQTVIASYWYNEVKPFLWW-VS---NWVVLFGSAAYTFVK  312 (327)
Q Consensus       249 ~~~~~~~~~~~~~~~a~~~~~-~~~~~~v~~~i~~~~~~~e~~~~~~~-iG---~~lii~g~~l~~~~~  312 (327)
                      .+-+...++.++..+.+.+.. ..-.+-+-+.++|+++|||-.+..+. +|   .++++.|.++-.+.+
T Consensus        70 s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~  138 (288)
T COG4975          70 SFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD  138 (288)
T ss_pred             hhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence            344555667776665553333 33456677889999999999887665 34   457788887766644

>KOG2765|consensus

Probab=92.46  E-value=1.4  Score=40.18  Aligned_cols=140  Identities=15%  Similarity=0.137  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHH
Q psy14376         11 VKITLAVSLYWLVSIITVFVNKALLSEL--KLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINV   88 (327)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~~k~~l~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~   88 (327)
                      ..-.+.+.+|+.-...   + |.-..++  +.+-+.++-+.-.+--.++..+...+...+....+.|+    + .++-.+
T Consensus       250 llaL~sA~~YavY~vl---l-k~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~----~-~q~~~v  320 (416)
T KOG2765|consen  250 LLALLSALLYAVYTVL---L-KRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPS----S-TQFSLV  320 (416)
T ss_pred             HHHHHHHHHHHHHHHH---H-HhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCC----C-ceeEee
Confidence            3334445555443332   2 4444433  56667765555433222222222222222111224443    1 122334


Q ss_pred             HHHHHHH-HHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheeccC
Q psy14376         89 LPLSILF-MSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQE  159 (327)
Q Consensus        89 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~~  159 (327)
                      +..+++. ...=++|-+|.-.+++-.+++-.+.+....++...++.++++|...++|....++|.+++....
T Consensus       321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            4444443 3677788888889999999999999999999999999999999999999999999998865543

>KOG1444|consensus

Probab=91.96  E-value=0.83  Score=40.60  Aligned_cols=122  Identities=12%  Similarity=0.063  Sum_probs=80.5

Q ss_pred             HHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccC-ccccCCCCCCCChhhHHHHHHHHHHHHHHHHHhccccccc
Q psy14376         31 NKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFP-NILTFPTGNPFRLNTLINVLPLSILFMSMISFNNLCLKNV  109 (327)
Q Consensus        31 ~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  109 (327)
                      .|......++ .-..+.++..+.+...+.+..++..+.+ -..+.+.  -.+...+..+...+++..+-..+..++....
T Consensus       176 ~kk~vd~~~l-~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~--~~~~~~~~~~~lScv~gf~isy~s~~ct~~~  252 (314)
T KOG1444|consen  176 VKKSVDSANL-NKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDN--WSDSSVLVVMLLSCVMGFGISYTSFLCTRVN  252 (314)
T ss_pred             HHHhhccccc-cceeEEeehhHHHHHHHHHHHHHhcchHHHHhhccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3555544445 3566778888888888888877665432 0111111  0112223444444555556777777888899


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhhe
Q psy14376        110 GVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLG  155 (327)
Q Consensus       110 ~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~  155 (327)
                      |+...++.....-..+.+...++.+++.++....|+.++++|-++-
T Consensus       253 SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y  298 (314)
T KOG1444|consen  253 SATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY  298 (314)
T ss_pred             cccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence            9988888886666667777777777888999999999888888773

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=90.78  E-value=1.8  Score=32.61  Aligned_cols=49  Identities=12%  Similarity=-0.003  Sum_probs=35.6

Q ss_pred             HHhcchhhHHhh-hcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhh
Q psy14376        259 IKITSPLTHNIS-GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAA  307 (327)
Q Consensus       259 ~~~~~a~~~~~~-~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l  307 (327)
                      .++.+-+....+ ..+.-+++.+.++++.+|..+...++|+.+++.|+.+
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            444444433333 3566677888888877788888999999999999864

Many members are annotated as potential transmembrane proteins.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.55  E-value=9.1  Score=30.38  Aligned_cols=127  Identities=12%  Similarity=0.107  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccCccccCCCCCCCChhhHHHHHHHHHHHHHHHH
Q psy14376         21 WLVSIITVFVNKALLSELKLDAPLFITWFQCVISAFLCIFLHIFSLFFPNILTFPTGNPFRLNTLINVLPLSILFMSMIS  100 (327)
Q Consensus        21 ~~~s~~~~~~~k~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  100 (327)
                      +.......-+|-.+-+.  .++|+.-.+.-+..+...+..+...+.+++...       ..++...+....|++...+..
T Consensus        14 G~~l~~Q~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-------~~~~~pwW~~~GG~lGa~~vt   84 (150)
T COG3238          14 GALLPLQAAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLA-------AVASAPWWAWIGGLLGAIFVT   84 (150)
T ss_pred             hhhhhhHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-------hccCCchHHHHccchhhhhhh
Confidence            33334444455544432  336898899999998888888777643322111       112223334444555555555


Q ss_pred             HhcccccccchhHHH-HHHHHHHHHHHHHHHHH----hcccccchhhHHHHHHhhhhhhee
Q psy14376        101 FNNLCLKNVGVSFYY-IGRSLTTVFNVLFSYFL----LAQKTSFSACVCCGIIVMGFWLGV  156 (327)
Q Consensus       101 ~~~~~l~~~~~~~~~-~l~~~~pi~~~i~~~~~----~~e~~s~~~~~~~~l~~~Gv~l~~  156 (327)
                      .+......+.+...+ +..+-+-+.-+++..+=    -+++++..++.++++.++|+.+..
T Consensus        85 ~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          85 SSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            555566666555444 44555666666666553    246789999999999999965543

>KOG4314|consensus

Probab=89.30  E-value=0.5  Score=38.94  Aligned_cols=64  Identities=11%  Similarity=0.033  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhccch
Q psy14376        251 IGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVKQR  314 (327)
Q Consensus       251 ~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~~~  314 (327)
                      .+|....+.++.+|+.++-+......+..+++++++||+.....++..++.+.|++...|..+.
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~  129 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE  129 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence            3566667788999998888889999999999999999999999999999999999887765543

>KOG1580|consensus

Probab=88.47  E-value=0.43  Score=40.46  Aligned_cols=70  Identities=14%  Similarity=0.062  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhh
Q psy14376         85 LINVLPLSILFMSMISFNNLCLKNVGVSFYYIGRSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWL  154 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l  154 (327)
                      +.++...+++.+.++.+-+.-..+-++-.-+++..+--.|+.+.++++++++++.+||++.++.+.|...
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            4455666666676666666656666666666777778899999999999999999999999999998877

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=87.01  E-value=0.96  Score=39.33  Aligned_cols=25  Identities=28%  Similarity=0.614  Sum_probs=20.0

Q ss_pred             chhhhhHHHHHHhhhhhhhhccchh
Q psy14376        291 PFLWWVSNWVVLFGSAAYTFVKQRE  315 (327)
Q Consensus       291 ~~~~~iG~~lii~g~~l~~~~~~~~  315 (327)
                      .+..++|++++++|..++...|..+
T Consensus       115 ~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen  115 PWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hHHHHHHHHHHHHHHHheeeecCCC
Confidence            3678899999999999888765443

The region concerned is approximately 280 residues long.

>KOG2922|consensus

Probab=84.46  E-value=0.45  Score=42.28  Aligned_cols=120  Identities=18%  Similarity=0.175  Sum_probs=79.6

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceehhhhhhHHHHHHHHHHHHHcCcccccccccccchhHHHHHHHH
Q psy14376        164 SFSISGTVYGVIASASLALYSIHTKKVLPCVNNEIWLLSYYNNVYSSIILLFVSGLFGELKTVQDYADLNTAYFWLFLPI  243 (327)
Q Consensus       164 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (327)
                      ..+..|.++++.|.+..+...++.||-.+|.+..  .                 .-.++.    ......++.+|..++.
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~--~-----------------~ra~~g----g~~yl~~~~Ww~G~lt   73 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGAS--G-----------------LRAGEG----GYGYLKEPLWWAGMLT   73 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHhhh--c-----------------ccccCC----CcchhhhHHHHHHHHH
Confidence            4567899999999999999888888766643210  0                 000010    0011123333333221


Q ss_pred             HHHHHHHHHHHHHHHHHhcchhhHHhhhcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhh
Q psy14376        244 GGLCGFAIGYVTTLQIKITSPLTHNISGTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTF  310 (327)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~  310 (327)
                       -.+|=..||.   +....+++..+.++.+.-+.+.+++..+++|.++....+|+++.++|......
T Consensus        74 -m~vGei~NFa---AYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   74 -MIVGEIANFA---AYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             -HHHHhHhhHH---HHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence             1233333333   35667777888999999999999999999999999999999999999986654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=83.67  E-value=16  Score=33.20  Aligned_cols=24  Identities=25%  Similarity=0.384  Sum_probs=21.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhh
Q psy14376        167 ISGTVYGVIASASLALYSIHTKKV  190 (327)
Q Consensus       167 ~~G~~~~l~s~~~~a~~~v~~~~~  190 (327)
                      .+|+++..+++++.+.+.+-.||.
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv   29 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV   29 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc
Confidence            469999999999999999988875

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	327
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.43
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.35
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.25
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.91

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.43  E-value=7.1e-07  Score=66.42  Aligned_cols=70  Identities=14%  Similarity=0.118  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheecc
Q psy14376         89 LPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVDQ  158 (327)
Q Consensus        89 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~~  158 (327)
                      ....+++.....+...++++.|.+.+..+ .++.|+++.+.+++++||++++.+++|+.+.+.|+++....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34445567888889999999999999888 89999999999999999999999999999999999986543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.35  E-value=6.8e-07  Score=68.97  Aligned_cols=59  Identities=2%  Similarity=-0.028  Sum_probs=40.6

Q ss_pred             HHHHHHHhcchhhHHhh-hcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhcc
Q psy14376        254 VTTLQIKITSPLTHNIS-GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFVK  312 (327)
Q Consensus       254 ~~~~~~~~~~a~~~~~~-~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~~  312 (327)
                      ...+.+++.++.....+ ..+.|+.++++|++++||++++.+++|+.+++.|+++.+..+
T Consensus        46 l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           46 LLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34567888888866666 899999999999999999999999999999999999887643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.25  E-value=9.5e-07  Score=68.15  Aligned_cols=69  Identities=14%  Similarity=0.127  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHhcccccccchhHHHHH-HHHHHHHHHHHHHHHhcccccchhhHHHHHHhhhhhheec
Q psy14376         89 LPLSILFMSMISFNNLCLKNVGVSFYYIG-RSLTTVFNVLFSYFLLAQKTSFSACVCCGIIVMGFWLGVD  157 (327)
Q Consensus        89 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~l~~~Gv~l~~~  157 (327)
                      +...+++.....+++.++++.|++.+..+ .++.|++++++++++++|++++.+++|+.+.++|+.+...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34445577888999999999999988888 8999999999999999999999999999999999998544

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.91  E-value=5.2e-05  Score=56.19  Aligned_cols=57  Identities=2%  Similarity=-0.040  Sum_probs=49.2

Q ss_pred             HHHHHHhcchhhHHhh-hcchHHHHHHHHHHHhCCccchhhhhHHHHHHhhhhhhhhc
Q psy14376        255 TTLQIKITSPLTHNIS-GTAKACAQTVIASYWYNEVKPFLWWVSNWVVLFGSAAYTFV  311 (327)
Q Consensus       255 ~~~~~~~~~a~~~~~~-~~~~~v~~~i~~~~~~~e~~~~~~~iG~~lii~g~~l~~~~  311 (327)
                      ..+..|+.+......+ ..+.|+.+.+.|++++||++|+.+++|..+++.|++.....
T Consensus        47 ~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           47 LAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3457888888866555 78999999999999999999999999999999999987653

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00