Psyllid ID: psy14380

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510---
MSSHQEILIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEELMPIVYTPTVGLACQKFGLIFRRPRGLFITIHDKGHCFDLLKNWTITNEVIRDKIKMTKVTKKIQEQRLQWYGHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGEGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPGVALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGE
cccHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccccccccEEEEEcccccccccccccccccccccEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEcccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccccccccEEEEccccccEEEEEEccccccccccccccccccccEEEEcccccEEEEEcccccHHHHHHHcccccccEEEEEEcccccccccccccccccccHHHHHHHHHcccccccccccEEEEcccccHHccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccHHHHHHHHcccccEEccccccHHHHHHHHHHHHcccccccccccEEEEEcccc
cccEEEHcHHcccHHHHHHHHHHcHHHHHHHHcccHHHHHHHcHHHHHccccccEEccccEEEEEccccccHHHHHHHHHHcHHHHHHHHcccHHHHHHHcHHHHccccccEEEEHHHcccHHHHHcccccHccccccHHHHHHHHHHHHHHHHHcEEEEccccHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHccccccccEEEEcccHcccEEEEccccccEEEccEEEccEEccHHHcHHHHHHHHHHHcEccccHHHHHHHHcccccEEEEEccccEcccEccHHHHHHHHHHHHHHHHHHHcccHHHEEEEEEEcccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccccEEEccccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHccccccccEEEEcccH
MSSHQEILIMDRNERLFFRLLSENVEelmpivytptvglacqksekiknysscrlvkkyslsygispldrNERLFFRLLSENVEelmpivytptvglacqkfglifrrprglfitihdkGHCFDLLKNWTITNEVIRDKIKMTKVTKKIQEQRLQWYghfedfgnhnafrFLDKYRDkyctfnddiqGTASVAVAGLMAGRRVTGKKISECRFLFlgagegrcifasgspfppvkmetktyypgqgnnayifpgVALGVIATGIHHITEDIFLiaaepdvrAIVVTDgerilglgdlgacgmgipvgkLSLYTALagikphqclpitidvgtnnekllkdplyvglrqkrttgEAYDELIDEFMKAVVKRYGQNTLIqfedfgnhnafRFLDKYRDKyctfndegtnnekllkdplyvglrqkrttgEAYDELIDEFMKAVVKRYGQNTLIqfedfgnhnafRFLDKYRDkyctfnddiqGTASVAVAGLMAGRRVTGKKISECRFLFLGAGE
msshqeilimdrnERLFFRLLSENVEELMPIVYTPtvglacqksekiknysscrlvKKYSlsygispldrNERLFFRLLSENVEELMPIVYTPTVGLACQKFGLIFRRPRGLFITIHDKGHCfdllknwtitnevirdkikmtkVTKKIQEQRLQWYGHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGEGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPGVALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLlkdplyvglrqkrTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFndegtnnekllkdplyvgLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMagrrvtgkkiseCRFLFLGAGE
MSSHQEILIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEELMPIVYTPTVGLACQKFGLIFRRPRGLFITIHDKGHCFDLLKNWTITNEVIRDKIKMTKVTKKIQEQRLQWYGHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGEGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPGVALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGE
******ILIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEELMPIVYTPTVGLACQKFGLIFRRPRGLFITIHDKGHCFDLLKNWTITNEVIRDKIKMTKVTKKIQEQRLQWYGHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGEGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPGVALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLG***
MSSHQEILIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEELMPIVYTPTVGLACQKFGLIFRRPRGLFITIHDKGHCFDLLKNWTITNEVIRDKIKMTKVTKKIQEQRLQWYGHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGEGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPGVALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGE
MSSHQEILIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEELMPIVYTPTVGLACQKFGLIFRRPRGLFITIHDKGHCFDLLKNWTITNEVIRDKIKMTKVTKKIQEQRLQWYGHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGEGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPGVALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGE
MSSHQEILIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEELMPIVYTPTVGLACQKFGLIFRRPRGLFITIHDKGHCFDLLKNWTITNEVIRDKIKMTKVTKKIQEQRLQWYGHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGEGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPGVALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAG*
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MSSHQEILIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEELMPIVYTPTVGLACQKFGLIFRRPRGLFITIHDKGHCFDLLKNWTITNEVIRDKIKMTKVTKKIQEQRLQWYGHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGEGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPGVALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFLGAGE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query513 2.2.26 [Sep-21-2011]
P40927 557 NADP-dependent malic enzy N/A N/A 0.304 0.280 0.621 2e-53
P28227 557 NADP-dependent malic enzy N/A N/A 0.173 0.159 0.668 5e-53
P23368 584 NAD-dependent malic enzym yes N/A 0.245 0.215 0.75 5e-52
Q99KE1 589 NAD-dependent malic enzym yes N/A 0.245 0.213 0.734 2e-51
P06801 572 NADP-dependent malic enzy no N/A 0.304 0.272 0.597 1e-50
P13697 572 NADP-dependent malic enzy no N/A 0.304 0.272 0.597 2e-50
Q8BMF3 604 NADP-dependent malic enzy no N/A 0.270 0.230 0.625 6e-50
P48163 572 NADP-dependent malic enzy no N/A 0.304 0.272 0.579 9e-50
Q16798 604 NADP-dependent malic enzy no N/A 0.177 0.150 0.679 1e-49
P27443 643 NAD-dependent malic enzym N/A N/A 0.245 0.195 0.710 3e-49
>sp|P40927|MAOX_COLLI NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1 Back     alignment and function desciption
 Score =  210 bits (534), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/164 (62%), Positives = 119/164 (72%), Gaps = 8/164 (4%)

Query: 258 GVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAG 317
           G IAT +    E +        ++AIVVTDGERILGLGDLG  GMGIPVGKL+LYTA  G
Sbjct: 120 GHIATMLQSWPESV--------IKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGG 171

Query: 318 IKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLI 377
           +KPHQCLP+ +DVGT+NE LLKDPLY+GLR KR  G+AYD+L+DEFM+AV  RYG N LI
Sbjct: 172 VKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLI 231

Query: 378 QFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLR 421
           QFEDF N NAFR L KYR+KYCTFND+      +    L   LR
Sbjct: 232 QFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALR 275

Columba livia (taxid: 8932)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 0
>sp|P28227|MAOX_ANAPL NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1 Back     alignment and function description
>sp|P23368|MAOM_HUMAN NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1 Back     alignment and function description
>sp|Q99KE1|MAOM_MOUSE NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1 Back     alignment and function description
>sp|P06801|MAOX_MOUSE NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=2 Back     alignment and function description
>sp|P13697|MAOX_RAT NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2 Back     alignment and function description
>sp|Q8BMF3|MAON_MOUSE NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=2 Back     alignment and function description
>sp|P48163|MAOX_HUMAN NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1 Back     alignment and function description
>sp|Q16798|MAON_HUMAN NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2 Back     alignment and function description
>sp|P27443|MAOM_ASCSU NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query513
157114273 652 malic enzyme [Aedes aegypti] gi|10888362 0.395 0.311 0.599 9e-62
194765021 622 GF23280 [Drosophila ananassae] gi|190614 0.311 0.257 0.723 1e-61
195391352 623 GJ22862 [Drosophila virilis] gi|19415241 0.311 0.256 0.723 2e-61
347971359 629 AGAP004159-PB [Anopheles gambiae str. PE 0.257 0.209 0.822 3e-61
281362674 624 malic enzyme b, isoform C [Drosophila me 0.311 0.256 0.717 3e-61
21356279 617 malic enzyme b, isoform A [Drosophila me 0.311 0.259 0.717 3e-61
195056139 629 GH17523 [Drosophila grimshawi] gi|193892 0.311 0.254 0.717 3e-61
281362672 621 malic enzyme b, isoform B [Drosophila me 0.311 0.257 0.717 3e-61
195445002 622 GK11883 [Drosophila willistoni] gi|19416 0.311 0.257 0.717 4e-61
195053392 869 GH20613 [Drosophila grimshawi] gi|193895 0.311 0.184 0.717 4e-61
>gi|157114273|ref|XP_001658019.1| malic enzyme [Aedes aegypti] gi|108883625|gb|EAT47850.1| AAEL001091-PA [Aedes aegypti] Back     alignment and taxonomy information
 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 136/227 (59%), Positives = 152/227 (66%), Gaps = 24/227 (10%)

Query: 277 EPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEK 336
           E DVRAIVVTDGERILGLGDLGACGMGIPVGKL+LYTALAGI PHQCLPI IDVGTNN+ 
Sbjct: 216 EHDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALAGIPPHQCLPIVIDVGTNNQD 275

Query: 337 LLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRD 396
           LL+DPLYVGLR KR +G+ YD+ IDEFM+AVVKRYGQNTLIQFEDFGNHNAFRFLDKYRD
Sbjct: 276 LLEDPLYVGLRHKRVSGKEYDDFIDEFMEAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRD 335

Query: 397 KYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLI----Q 452
            YCTFND+      +    L   L  KR TG+   E    F+ A     G   L+    Q
Sbjct: 336 TYCTFNDDIQGTASVAVAGL---LASKRITGKKISENTFCFLGAGEAAIGIADLVVKAMQ 392

Query: 453 FEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGK 499
            E  G       L + RDK   F+ D          GL+A  R  G+
Sbjct: 393 AEGCG-------LQEARDKIWLFDID----------GLLAKGRPEGR 422

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|194765021|ref|XP_001964626.1| GF23280 [Drosophila ananassae] gi|190614898|gb|EDV30422.1| GF23280 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|195391352|ref|XP_002054324.1| GJ22862 [Drosophila virilis] gi|194152410|gb|EDW67844.1| GJ22862 [Drosophila virilis] Back     alignment and taxonomy information
>gi|347971359|ref|XP_003436731.1| AGAP004159-PB [Anopheles gambiae str. PEST] gi|333468634|gb|EGK97005.1| AGAP004159-PB [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|281362674|ref|NP_001163750.1| malic enzyme b, isoform C [Drosophila melanogaster] gi|272477202|gb|ACZ95044.1| malic enzyme b, isoform C [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|21356279|ref|NP_651959.1| malic enzyme b, isoform A [Drosophila melanogaster] gi|7301553|gb|AAF56674.1| malic enzyme b, isoform A [Drosophila melanogaster] gi|15291241|gb|AAK92889.1| GH13437p [Drosophila melanogaster] gi|220947476|gb|ACL86281.1| Mdh-PA [synthetic construct] gi|220956868|gb|ACL90977.1| Mdh-PA [synthetic construct] Back     alignment and taxonomy information
>gi|195056139|ref|XP_001994970.1| GH17523 [Drosophila grimshawi] gi|193892733|gb|EDV91599.1| GH17523 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|281362672|ref|NP_001163749.1| malic enzyme b, isoform B [Drosophila melanogaster] gi|272477201|gb|ACZ95043.1| malic enzyme b, isoform B [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|195445002|ref|XP_002070127.1| GK11883 [Drosophila willistoni] gi|194166212|gb|EDW81113.1| GK11883 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|195053392|ref|XP_001993610.1| GH20613 [Drosophila grimshawi] gi|193895480|gb|EDV94346.1| GH20613 [Drosophila grimshawi] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query513
FB|FBgn0029155 624 Men-b "Malic enzyme b" [Drosop 0.317 0.261 0.712 3.1e-87
FB|FBgn0002719 763 Men "Malic enzyme" [Drosophila 0.309 0.208 0.675 6.7e-75
ZFIN|ZDB-GENE-040801-147 581 me2 "malic enzyme 2, NAD(+)-de 0.247 0.218 0.751 9.7e-74
UNIPROTKB|P48163 572 ME1 "NADP-dependent malic enzy 0.284 0.255 0.624 1.4e-73
RGD|3074 572 Me1 "malic enzyme 1, NADP(+)-d 0.249 0.223 0.710 1.8e-73
UNIPROTKB|P13697 572 Me1 "NADP-dependent malic enzy 0.249 0.223 0.710 1.8e-73
UNIPROTKB|E2R4S5 584 ME2 "Malic enzyme" [Canis lupu 0.249 0.219 0.757 3.2e-73
UNIPROTKB|Q08DM3 584 ME2 "Malic enzyme" [Bos taurus 0.249 0.219 0.757 4.1e-73
MGI|MGI:97043 572 Me1 "malic enzyme 1, NADP(+)-d 0.249 0.223 0.710 4.8e-73
ZFIN|ZDB-GENE-041111-294 603 me3 "malic enzyme 3, NADP(+)-d 0.249 0.212 0.695 6.7e-73
FB|FBgn0029155 Men-b "Malic enzyme b" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 608 (219.1 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
 Identities = 119/167 (71%), Positives = 133/167 (79%)

Query:   266 HITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLP 325
             HI  D+     EP+VRAI VTDGERILGLGDLGACGMGIPVGKL+LYTALAGIKPHQCLP
Sbjct:   170 HIF-DVMKNWPEPNVRAICVTDGERILGLGDLGACGMGIPVGKLALYTALAGIKPHQCLP 228

Query:   326 ITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNH 385
             I +DVGTNN  LL+DPLYVGLRQKR  G  YDE IDEFM+AVV+RYGQNTLIQFEDFGNH
Sbjct:   229 IVVDVGTNNIDLLEDPLYVGLRQKRVVGREYDEFIDEFMEAVVQRYGQNTLIQFEDFGNH 288

Query:   386 NAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDE 432
             NAFRFLDKYR+ YCTFND+      +    LY     KR TG+++ +
Sbjct:   289 NAFRFLDKYRNTYCTFNDDIQGTASVAVAGLYAS---KRITGKSFKD 332
GO:0004473 "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity" evidence=ISS;NAS
GO:0005739 "mitochondrion" evidence=ISS
GO:0006108 "malate metabolic process" evidence=ISS
GO:0006090 "pyruvate metabolic process" evidence=ISS
GO:0046872 "metal ion binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA
GO:0051287 "NAD binding" evidence=IEA
FB|FBgn0002719 Men "Malic enzyme" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-147 me2 "malic enzyme 2, NAD(+)-dependent, mitochondrial" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P48163 ME1 "NADP-dependent malic enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|3074 Me1 "malic enzyme 1, NADP(+)-dependent, cytosolic" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P13697 Me1 "NADP-dependent malic enzyme" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R4S5 ME2 "Malic enzyme" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q08DM3 ME2 "Malic enzyme" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:97043 Me1 "malic enzyme 1, NADP(+)-dependent, cytosolic" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041111-294 me3 "malic enzyme 3, NADP(+)-dependent, mitochondrial" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.1.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query513
PLN03129 581 PLN03129, PLN03129, NADP-dependent malic enzyme; P 1e-83
PRK13529 563 PRK13529, PRK13529, malate dehydrogenase; Provisio 2e-76
pfam00390182 pfam00390, malic, Malic enzyme, N-terminal domain 4e-70
PLN03129 581 PLN03129, PLN03129, NADP-dependent malic enzyme; P 3e-62
PTZ00317 559 PTZ00317, PTZ00317, NADP-dependent malic enzyme; P 8e-59
PRK13529 563 PRK13529, PRK13529, malate dehydrogenase; Provisio 1e-54
PTZ00317 559 PTZ00317, PTZ00317, NADP-dependent malic enzyme; P 6e-41
PLN03129581 PLN03129, PLN03129, NADP-dependent malic enzyme; P 3e-31
pfam00390182 pfam00390, malic, Malic enzyme, N-terminal domain 3e-31
PRK13529563 PRK13529, PRK13529, malate dehydrogenase; Provisio 1e-29
PRK13529563 PRK13529, PRK13529, malate dehydrogenase; Provisio 4e-29
PLN03129581 PLN03129, PLN03129, NADP-dependent malic enzyme; P 9e-29
COG0281 432 COG0281, SfcA, Malic enzyme [Energy production and 3e-28
pfam00390182 pfam00390, malic, Malic enzyme, N-terminal domain 1e-26
cd05312279 cd05312, NAD_bind_1_malic_enz, NAD(P) binding doma 1e-26
COG0281432 COG0281, SfcA, Malic enzyme [Energy production and 6e-26
pfam03949255 pfam03949, Malic_M, Malic enzyme, NAD binding doma 1e-24
cd00762254 cd00762, NAD_bind_malic_enz, NAD(P) binding domain 1e-24
PLN03129581 PLN03129, PLN03129, NADP-dependent malic enzyme; P 6e-24
COG0281 432 COG0281, SfcA, Malic enzyme [Energy production and 1e-21
PTZ00317559 PTZ00317, PTZ00317, NADP-dependent malic enzyme; P 1e-20
PRK13529563 PRK13529, PRK13529, malate dehydrogenase; Provisio 2e-20
PTZ00317559 PTZ00317, PTZ00317, NADP-dependent malic enzyme; P 4e-18
PTZ00317559 PTZ00317, PTZ00317, NADP-dependent malic enzyme; P 3e-16
smart00919231 smart00919, Malic_M, Malic enzyme, NAD binding dom 5e-16
pfam03949255 pfam03949, Malic_M, Malic enzyme, NAD binding doma 8e-11
pfam03949 255 pfam03949, Malic_M, Malic enzyme, NAD binding doma 8e-11
smart00919231 smart00919, Malic_M, Malic enzyme, NAD binding dom 3e-10
smart00919 231 smart00919, Malic_M, Malic enzyme, NAD binding dom 3e-10
cd05312279 cd05312, NAD_bind_1_malic_enz, NAD(P) binding doma 5e-10
cd05312 279 cd05312, NAD_bind_1_malic_enz, NAD(P) binding doma 9e-10
COG0281432 COG0281, SfcA, Malic enzyme [Energy production and 6e-09
cd00762254 cd00762, NAD_bind_malic_enz, NAD(P) binding domain 2e-08
cd00762 254 cd00762, NAD_bind_malic_enz, NAD(P) binding domain 2e-08
cd05311226 cd05311, NAD_bind_2_malic_enz, NAD(P) binding doma 3e-05
cd05311 226 cd05311, NAD_bind_2_malic_enz, NAD(P) binding doma 3e-05
COG0281432 COG0281, SfcA, Malic enzyme [Energy production and 1e-04
pfam00390182 pfam00390, malic, Malic enzyme, N-terminal domain 4e-04
PRK07232 752 PRK07232, PRK07232, bifunctional malic enzyme oxid 0.001
PRK07232 752 PRK07232, PRK07232, bifunctional malic enzyme oxid 0.001
>gnl|CDD|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional Back     alignment and domain information 
 Score =  269 bits (690), Expect = 1e-83
 Identities = 90/132 (68%), Positives = 102/132 (77%), Gaps = 2/132 (1%)

Query: 277 EPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEK 336
           E DV+ IVVTDGERILGLGDLG  GMGIPVGKL LYTA  GI+P   LP+ IDVGTNNEK
Sbjct: 169 ERDVQVIVVTDGERILGLGDLGVQGMGIPVGKLDLYTAAGGIRPSAVLPVCIDVGTNNEK 228

Query: 337 LLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRD 396
           LL DP Y+GLRQ R TGE YDEL+DEFM+AV +R+G   L+QFEDF N NAFR L +YR 
Sbjct: 229 LLNDPFYIGLRQPRLTGEEYDELVDEFMEAVKQRWGPKVLVQFEDFANKNAFRLLQRYRT 288

Query: 397 KYCTFND--EGT 406
            +  FND  +GT
Sbjct: 289 THLCFNDDIQGT 300

Length = 581
>gnl|CDD|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|215894 pfam00390, malic, Malic enzyme, N-terminal domain Back     alignment and domain information
>gnl|CDD|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|215894 pfam00390, malic, Malic enzyme, N-terminal domain Back     alignment and domain information
>gnl|CDD|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|215894 pfam00390, malic, Malic enzyme, N-terminal domain Back     alignment and domain information
>gnl|CDD|133454 cd05312, NAD_bind_1_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 1 Back     alignment and domain information
>gnl|CDD|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|217809 pfam03949, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|133442 cd00762, NAD_bind_malic_enz, NAD(P) binding domain of malic enzyme Back     alignment and domain information
>gnl|CDD|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|214912 smart00919, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|217809 pfam03949, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|217809 pfam03949, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|214912 smart00919, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|214912 smart00919, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|133454 cd05312, NAD_bind_1_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 1 Back     alignment and domain information
>gnl|CDD|133454 cd05312, NAD_bind_1_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 1 Back     alignment and domain information
>gnl|CDD|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|133442 cd00762, NAD_bind_malic_enz, NAD(P) binding domain of malic enzyme Back     alignment and domain information
>gnl|CDD|133442 cd00762, NAD_bind_malic_enz, NAD(P) binding domain of malic enzyme Back     alignment and domain information
>gnl|CDD|133453 cd05311, NAD_bind_2_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>gnl|CDD|133453 cd05311, NAD_bind_2_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>gnl|CDD|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|215894 pfam00390, malic, Malic enzyme, N-terminal domain Back     alignment and domain information
>gnl|CDD|235976 PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed Back     alignment and domain information
>gnl|CDD|235976 PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 513
KOG1257|consensus582 100.0
PRK13529563 malate dehydrogenase; Provisional 100.0
PTZ00317559 NADP-dependent malic enzyme; Provisional 100.0
PLN03129581 NADP-dependent malic enzyme; Provisional 100.0
KOG1257|consensus 582 100.0
PRK13529 563 malate dehydrogenase; Provisional 100.0
PTZ00317 559 NADP-dependent malic enzyme; Provisional 100.0
PLN03129 581 NADP-dependent malic enzyme; Provisional 100.0
PF00390182 malic: Malic enzyme, N-terminal domain; InterPro: 100.0
COG0281432 SfcA Malic enzyme [Energy production and conversio 100.0
PRK12861 764 malic enzyme; Reviewed 100.0
PRK12862 763 malic enzyme; Reviewed 100.0
PRK07232 752 bifunctional malic enzyme oxidoreductase/phosphotr 100.0
PRK12861 764 malic enzyme; Reviewed 100.0
PRK12862 763 malic enzyme; Reviewed 100.0
PRK07232 752 bifunctional malic enzyme oxidoreductase/phosphotr 100.0
COG0281 432 SfcA Malic enzyme [Energy production and conversio 100.0
PF03949255 Malic_M: Malic enzyme, NAD binding domain; InterPr 100.0
cd05312279 NAD_bind_1_malic_enz NAD(P) binding domain of mali 99.98
cd00762254 NAD_bind_malic_enz NAD(P) binding domain of malic 99.97
cd05311226 NAD_bind_2_malic_enz NAD(P) binding domain of mali 99.85
PF00390182 malic: Malic enzyme, N-terminal domain; InterPro: 99.66
cd0519186 NAD_bind_amino_acid_DH NAD(P) binding domain of am 89.01
cd0519186 NAD_bind_amino_acid_DH NAD(P) binding domain of am 87.66
>KOG1257|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.9e-90  Score=726.86  Aligned_cols=297  Identities=47%  Similarity=0.726  Sum_probs=260.2

Q ss_pred             hhhccchhhHHHHHhhCcccccceeeccchhhhhhhhhhHhhhcccccccccceeeecCCCCchHHHHHHHhhhcccc-c
Q psy14380          8 LIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEE-L   86 (513)
Q Consensus         8 ~L~drNe~LFYrLL~~hleEllPIVYTPTVGeACQ~ys~i~rys~~~~~~~~~~~~~is~~Drg~~~~~~~l~~~~~~-i   86 (513)
                      .||+|||+||||+|++|++|+||||||||||+|||+||++||+++         ++||+++|+|  ++.++++|||++ +
T Consensus        93 ~L~~rNerLfY~~l~~nie~~~PIvYTPTvG~acq~y~~i~r~p~---------Glfisi~D~G--hi~~~l~nWp~~~V  161 (582)
T KOG1257|consen   93 DLQDRNERLFYRLLIDNIEELLPIVYTPTVGLACQQYGLIFRRPQ---------GLFISIKDKG--HIKQVLKNWPERNV  161 (582)
T ss_pred             HHHHhhhHHHHHHHHhhHHHhCCeeecCcHHHHHHHhhhhhccCc---------eeEEEecccc--hHHHHHHhCCccce
Confidence            489999999999999999999999999999999999999998764         5789999996  588999999977 5


Q ss_pred             cCEEEcCch---h---hhhhhccccc------cCCCeeEEeecCCcchHHHhhccCCCcc-ccccccchhh---------
Q psy14380         87 MPIVYTPTV---G---LACQKFGLIF------RRPRGLFITIHDKGHCFDLLKNWTITNE-VIRDKIKMTK---------  144 (513)
Q Consensus        87 ~~IVVTDG~---G---ig~~g~gi~~------~p~~gL~I~I~d~g~~~~vl~d~ttnne-~L~dplY~g~---------  144 (513)
                      .+||||||+   |   +|++||||++      +...|    | +|+.|+||++|+||||| +|+||+|+|.         
T Consensus       162 ~~IvVTDGerILGLGDlG~~GmgIpvgKL~Lyta~~G----I-~P~~cLPV~LDVGTNNe~Ll~DplYiGLr~~R~~g~e  236 (582)
T KOG1257|consen  162 KAIVVTDGERILGLGDLGVNGMGIPVGKLALYTALGG----I-RPSRCLPVCLDVGTNNEKLLNDPLYIGLRQRRVRGKE  236 (582)
T ss_pred             eEEEEeCCCceecccccccCcccceecHHHHHHHhcC----C-ChhhceeEEEeccCChHHHhcCccccccccccccccH
Confidence            599999985   3   5666777653      22333    2 46666666666666666 5577999993         


Q ss_pred             ---hHHHHHHHHHhhcc-----ccccCCccchHHHHHHhcccCcccccCcchhHHHHHHHHHhhhhhcCcccccceEEEe
Q psy14380        145 ---VTKKIQEQRLQWYG-----HFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFL  216 (513)
Q Consensus       145 ---~~~~v~~a~~~~~~-----qFEDF~~~NAfrlLerYR~~~~~FNDDIQGTgAVaLAGlLaAlr~tg~~l~d~rivf~  216 (513)
                         +.+||+.++.+.|+     |||||+++||||+|+|||++||||||||||||||+|||+|+|+|++|++|+|++|||+
T Consensus       237 Yd~~~dEFm~Av~~~yG~~~lIqFEDF~~~nAfrlL~kYr~~~c~FNDDIQGTaaValAgllaa~rit~~~lsd~~ilf~  316 (582)
T KOG1257|consen  237 YDEFLDEFMEAVVQRYGPNTLIQFEDFANHNAFRLLEKYRNKYCMFNDDIQGTAAVALAGLLAALRITGKPLSDHVILFL  316 (582)
T ss_pred             HHHHHHHHHHHHHHHhCcceEEEehhccchhHHHHHHHhccccceecccccchhHHHHHHHHHHHHHhCCccccceEEEe
Confidence               34667777666553     9999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC-----------------------------------------------------------------------------
Q psy14380        217 GAG-----------------------------------------------------------------------------  219 (513)
Q Consensus       217 GAG-----------------------------------------------------------------------------  219 (513)
                      |||                                                                             
T Consensus       317 GAG~A~~GIA~l~v~~m~~~Gl~~eeA~kkIwlvD~~GLi~~~r~~~l~~~~~~fAk~~~~~~~L~e~V~~vKPtvLiG~  396 (582)
T KOG1257|consen  317 GAGEAALGIANLIVMAMVKEGLSEEEARKKIWLVDSKGLITKGRKASLTEEKKPFAKDHEEIKDLEEAVKEVKPTVLIGA  396 (582)
T ss_pred             cCchHHhhHHHHHHHHHHHcCCCHHHHhccEEEEecCceeeccccCCCChhhccccccChHHHHHHHHHHhcCCcEEEec
Confidence            999                                                                             


Q ss_pred             ---------------------------------------------CceEEEeeCCCCCCcccCCeeeccCCCcceeeccc
Q psy14380        220 ---------------------------------------------EGRCIFASGSPFPPVKMETKTYYPGQGNNAYIFPG  254 (513)
Q Consensus       220 ---------------------------------------------~GkalfAsGSPfp~V~~~Gk~y~pgQ~NN~yiFPG  254 (513)
                                                                   +||||||||||||||+++||+|+||||||+|+|||
T Consensus       397 S~~~g~Fteevl~~Ma~~~erPiIFalSNPT~~aECtae~ay~~t~Gr~ifaSGSPF~pV~~~gK~~~pgQ~NN~yiFPG  476 (582)
T KOG1257|consen  397 SGVGGAFTEEVLRAMAKSNERPIIFALSNPTSKAECTAEQAYKWTKGRAIFASGSPFPPVEYNGKVYVPGQGNNAYIFPG  476 (582)
T ss_pred             ccCCccCCHHHHHHHHhcCCCceEEecCCCccccccCHHHHhhhcCCcEEEecCCCCCCceeCCcEecccCCceeEecch
Confidence                                                         79999999999999999999999999999999999


Q ss_pred             cchheeccccccccHHHHHhhcCCCceeeeecCCceeeccCCCCCCCcCcccchheeehhccCCCCCceece
Q psy14380        255 VALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPI  326 (513)
Q Consensus       255 IgLGai~s~a~~Itd~m~~aAA~~l~~A~vVTdg~~Ilg~gDlG~~g~~~~vgKlsl~~A~agI~~a~~~p~  326 (513)
                      ||||+++|++++|||+||.+||+++  |..+|+++  +--|-++|+-..  ++++|+.+|.+++..|+...+
T Consensus       477 i~Lg~vlsg~~~i~D~mfl~Aae~L--A~~v~~e~--~~~g~lyPpl~~--ir~iS~~Ia~aV~~~a~~~gl  542 (582)
T KOG1257|consen  477 IGLGVVLSGARRIPDEMFLAAAEAL--AEQVSEEE--LEKGRLYPPLSN--IREISANIAAAVLKYAYEEGL  542 (582)
T ss_pred             HHHHHHHcCCccCCHHHHHHHHHHH--HhhCCHhH--hhcCCcCCChhH--HHHHHHHHHHHHHHHHHhcCc
Confidence            9999999999999999999999998  89999988  668999998655  699999999999997765543

>PRK13529 malate dehydrogenase; Provisional Back     alignment and domain information
>PTZ00317 NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>PLN03129 NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>KOG1257|consensus Back     alignment and domain information
>PRK13529 malate dehydrogenase; Provisional Back     alignment and domain information
>PTZ00317 NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>PLN03129 NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>PF00390 malic: Malic enzyme, N-terminal domain; InterPro: IPR012301 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e Back     alignment and domain information
>COG0281 SfcA Malic enzyme [Energy production and conversion] Back     alignment and domain information
>PRK12861 malic enzyme; Reviewed Back     alignment and domain information
>PRK12862 malic enzyme; Reviewed Back     alignment and domain information
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed Back     alignment and domain information
>PRK12861 malic enzyme; Reviewed Back     alignment and domain information
>PRK12862 malic enzyme; Reviewed Back     alignment and domain information
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed Back     alignment and domain information
>COG0281 SfcA Malic enzyme [Energy production and conversion] Back     alignment and domain information
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e Back     alignment and domain information
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1 Back     alignment and domain information
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme Back     alignment and domain information
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>PF00390 malic: Malic enzyme, N-terminal domain; InterPro: IPR012301 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e Back     alignment and domain information
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query513
1gz3_A 554 Molecular Mechanism For The Regulation Of Human Mit 1e-53
1gz3_A 554 Molecular Mechanism For The Regulation Of Human Mit 3e-37
1gq2_A 555 Malic Enzyme From Pigeon Liver Length = 555 7e-53
1gq2_A 555 Malic Enzyme From Pigeon Liver Length = 555 2e-40
1qr6_A 584 Human Mitochondrial Nad(P)-Dependent Malic Enzyme L 3e-51
1qr6_A 584 Human Mitochondrial Nad(P)-Dependent Malic Enzyme L 3e-36
1do8_A 564 Crystal Structure Of A Closed Form Of Human Mitocho 3e-51
1do8_A 564 Crystal Structure Of A Closed Form Of Human Mitocho 3e-36
1efk_A 584 Structure Of Human Malic Enzyme In Complex With Ket 3e-51
1efk_A 584 Structure Of Human Malic Enzyme In Complex With Ket 3e-36
1gz4_A 551 Molecular Mechanism Of The Regulation Of Human Mito 4e-51
1gz4_A 551 Molecular Mechanism Of The Regulation Of Human Mito 5e-36
2aw5_A 575 Crystal Structure Of A Human Malic Enzyme Length = 6e-51
2aw5_A 575 Crystal Structure Of A Human Malic Enzyme Length = 5e-40
1llq_A 605 Crystal Structure Of Malic Enzyme From Ascaris Suum 3e-50
1llq_A 605 Crystal Structure Of Malic Enzyme From Ascaris Suum 2e-37
3nv9_A 487 Crystal Structure Of Entamoeba Histolytica Malic En 2e-09
2dvm_A 439 Nad Complex Structure Of Ph1275 Protein From Pyroco 5e-08
1ww8_A 439 Crystal Structure Of Malic Enzyme From Pyrococcus H 6e-08
2hae_A 386 Crystal Structure Of A Putative Malic Enzyme (Malat 1e-04
1vl6_A 388 Crystal Structure Of Nad-Dependent Malic Enzyme (Tm 1e-04
>pdb|1GZ3|A Chain A, Molecular Mechanism For The Regulation Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme By Atp And Fumarate Length = 554 Back     alignment and structure 
Iteration: 1

 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 97/128 (75%), Positives = 109/128 (85%)
Query: 277 EPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEK 336
           E  V+A+VVTDGERILGLGDLG  GMGIPVGKL LYTA AGI+P QCLP+ IDVGT+N  
Sbjct: 133 ENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDQCLPVCIDVGTDNIA 192
Query: 337 LLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRD 396
           LLKDP Y+GL QKR   + YD+LIDEFMKA+  RYG+NTLIQFEDFGNHNAFRFL KYR+
Sbjct: 193 LLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYRE 252
Query: 397 KYCTFNDE 404
           KYCTFND+
Sbjct: 253 KYCTFNDD 260
>pdb|1GZ3|A Chain A, Molecular Mechanism For The Regulation Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme By Atp And Fumarate Length = 554 Back     alignment and structure
>pdb|1GQ2|A Chain A, Malic Enzyme From Pigeon Liver Length = 555 Back     alignment and structure
>pdb|1GQ2|A Chain A, Malic Enzyme From Pigeon Liver Length = 555 Back     alignment and structure
>pdb|1QR6|A Chain A, Human Mitochondrial Nad(P)-Dependent Malic Enzyme Length = 584 Back     alignment and structure
>pdb|1QR6|A Chain A, Human Mitochondrial Nad(P)-Dependent Malic Enzyme Length = 584 Back     alignment and structure
>pdb|1DO8|A Chain A, Crystal Structure Of A Closed Form Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme Length = 564 Back     alignment and structure
>pdb|1DO8|A Chain A, Crystal Structure Of A Closed Form Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme Length = 564 Back     alignment and structure
>pdb|1EFK|A Chain A, Structure Of Human Malic Enzyme In Complex With Ketomalonate Length = 584 Back     alignment and structure
>pdb|1EFK|A Chain A, Structure Of Human Malic Enzyme In Complex With Ketomalonate Length = 584 Back     alignment and structure
>pdb|1GZ4|A Chain A, Molecular Mechanism Of The Regulation Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme By Atp And Fumarate Length = 551 Back     alignment and structure
>pdb|1GZ4|A Chain A, Molecular Mechanism Of The Regulation Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme By Atp And Fumarate Length = 551 Back     alignment and structure
>pdb|2AW5|A Chain A, Crystal Structure Of A Human Malic Enzyme Length = 575 Back     alignment and structure
>pdb|2AW5|A Chain A, Crystal Structure Of A Human Malic Enzyme Length = 575 Back     alignment and structure
>pdb|1LLQ|A Chain A, Crystal Structure Of Malic Enzyme From Ascaris Suum Complexed With Nicotinamide Adenine Dinucleotide Length = 605 Back     alignment and structure
>pdb|1LLQ|A Chain A, Crystal Structure Of Malic Enzyme From Ascaris Suum Complexed With Nicotinamide Adenine Dinucleotide Length = 605 Back     alignment and structure
>pdb|3NV9|A Chain A, Crystal Structure Of Entamoeba Histolytica Malic Enzyme Length = 487 Back     alignment and structure
>pdb|2DVM|A Chain A, Nad Complex Structure Of Ph1275 Protein From Pyrococcus Horikoshii Length = 439 Back     alignment and structure
>pdb|1WW8|A Chain A, Crystal Structure Of Malic Enzyme From Pyrococcus Horikoshii Ot3 Length = 439 Back     alignment and structure
>pdb|2HAE|A Chain A, Crystal Structure Of A Putative Malic Enzyme (Malate Oxidoreductase) Length = 386 Back     alignment and structure
>pdb|1VL6|A Chain A, Crystal Structure Of Nad-Dependent Malic Enzyme (Tm0542) From Thermotoga Maritima At 2.61 A Resolution Length = 388 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query513
1pj3_A 564 NAD-dependent malic enzyme, mitochondrial; oxidati 4e-78
1pj3_A 564 NAD-dependent malic enzyme, mitochondrial; oxidati 1e-53
1pj3_A564 NAD-dependent malic enzyme, mitochondrial; oxidati 7e-30
1pj3_A564 NAD-dependent malic enzyme, mitochondrial; oxidati 3e-23
1pj3_A564 NAD-dependent malic enzyme, mitochondrial; oxidati 3e-23
1gq2_A 555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 8e-78
1gq2_A 555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 1e-53
1gq2_A555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 9e-30
1gq2_A555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 1e-23
1gq2_A555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 2e-23
1o0s_A 605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 1e-77
1o0s_A 605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 3e-53
1o0s_A605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 1e-26
1o0s_A605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 2e-24
1o0s_A605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 2e-23
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
3nv9_A487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 3e-06
3nv9_A 487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 3e-06
3nv9_A 487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 1e-04
2dvm_A439 Malic enzyme, 439AA long hypothetical malate oxido 1e-05
2dvm_A 439 Malic enzyme, 439AA long hypothetical malate oxido 1e-05
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 2e-05
1vl6_A 388 Malate oxidoreductase; TM0542, NAD-dependent malic 2e-05
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 2e-05
2a9f_A 398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 2e-05
2a9f_A 398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 7e-04
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Length = 564 Back     alignment and structure
 Score =  254 bits (651), Expect = 4e-78
 Identities = 97/136 (71%), Positives = 110/136 (80%)

Query: 269 EDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITI 328
             I     E  V+A+VVTDGERILGLGDLG  GMGIPVGKL LYTA AGI+P +CLP+ I
Sbjct: 124 RSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCI 183

Query: 329 DVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDFGNHNAF 388
           DVGT+N  LLKDP Y+GL QKR   + YD+LIDEFMKA+  RYG+NTLIQFEDFGNHNAF
Sbjct: 184 DVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAF 243

Query: 389 RFLDKYRDKYCTFNDE 404
           RFL KYR+KYCTFND+
Sbjct: 244 RFLRKYREKYCTFNDD 259
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Length = 564 Back     alignment and structure
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Length = 564 Back     alignment and structure
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Length = 564 Back     alignment and structure
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Length = 564 Back     alignment and structure
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Length = 555 Back     alignment and structure
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Length = 555 Back     alignment and structure
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Length = 555 Back     alignment and structure
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Length = 555 Back     alignment and structure
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Length = 555 Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Length = 605 Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Length = 605 Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Length = 605 Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Length = 605 Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Length = 605 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Length = 487 Back     alignment and structure
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Length = 487 Back     alignment and structure
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Length = 487 Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Length = 439 Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Length = 439 Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Length = 388 Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Length = 388 Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Length = 398 Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Length = 398 Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Length = 398 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query513
1gq2_A555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 100.0
1pj3_A564 NAD-dependent malic enzyme, mitochondrial; oxidati 100.0
1o0s_A605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 100.0
1pj3_A 564 NAD-dependent malic enzyme, mitochondrial; oxidati 100.0
1gq2_A 555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 100.0
1o0s_A 605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 100.0
3nv9_A487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 100.0
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 100.0
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 100.0
3nv9_A 487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 100.0
2a9f_A 398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 100.0
1vl6_A 388 Malate oxidoreductase; TM0542, NAD-dependent malic 100.0
2dvm_A439 Malic enzyme, 439AA long hypothetical malate oxido 99.97
2dvm_A 439 Malic enzyme, 439AA long hypothetical malate oxido 99.91
3gvp_A 435 Adenosylhomocysteinase 3; protein CO-factor comple 84.95
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Back     alignment and structure
Probab=100.00  E-value=4.1e-77  Score=635.54  Aligned_cols=295  Identities=43%  Similarity=0.685  Sum_probs=242.0

Q ss_pred             hhhccchhhHHHHHhhCcccccceeeccchhhhhhhhhhHhhhcccccccccceeeecCCCCchHHHHHHHhhhcccc-c
Q psy14380          8 LIMDRNERLFFRLLSENVEELMPIVYTPTVGLACQKSEKIKNYSSCRLVKKYSLSYGISPLDRNERLFFRLLSENVEE-L   86 (513)
Q Consensus         8 ~L~drNe~LFYrLL~~hleEllPIVYTPTVGeACQ~ys~i~rys~~~~~~~~~~~~~is~~Drg~~~~~~~l~~~~~~-i   86 (513)
                      .|+++||+|||||+++|++|+|||+||||||++||+||++|++|+         ++|+|++|+++  ++.++.+|+++ +
T Consensus        65 ~L~~~Ne~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~---------g~yis~~d~~~--i~~~l~n~~~~~~  133 (555)
T 1gq2_A           65 SLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPR---------GLFITIHDRGH--IATMLQSWPESVI  133 (555)
T ss_dssp             HHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCC---------SEEEEGGGTTC--HHHHHHTSSCSCC
T ss_pred             HhcCcceeeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChh---------hhhcccCCHHH--HHHHHhcCCCCCc
Confidence            478999999999999999999999999999999999999998653         46789999874  77888898754 5


Q ss_pred             cCEEEcCch---hhhh---hhcccc------ccCCCeeEEeecCCcchHHHhhccCCCc-cccccccchhh---------
Q psy14380         87 MPIVYTPTV---GLAC---QKFGLI------FRRPRGLFITIHDKGHCFDLLKNWTITN-EVIRDKIKMTK---------  144 (513)
Q Consensus        87 ~~IVVTDG~---Gig~---~g~gi~------~~p~~gL~I~I~d~g~~~~vl~d~ttnn-e~L~dplY~g~---------  144 (513)
                      ..||||||.   |||+   ++++++      |+...|+     ||.+++||++|.|||| ++|.||+|+|.         
T Consensus       134 ~v~VVTDG~~ILGLGD~G~~g~~ipvGKl~Ly~~~aGI-----dP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~e  208 (555)
T 1gq2_A          134 KAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV-----KPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQA  208 (555)
T ss_dssp             CEEEEECSSSCGGGCCCGGGGGHHHHHHHHHHHHTTCC-----CGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHH
T ss_pred             EEEEEEccccccccCCCCCCccccchhHHHHhHhccCC-----ChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHH
Confidence            589999983   5433   344443      2212221     3444444444444454 56678999983         


Q ss_pred             ---hHHHHHH-HHHhh-c---cccccCCccchHHHHHHhcccCcccccCcchhHHHHHHHHHhhhhhcCcccccceEEEe
Q psy14380        145 ---VTKKIQE-QRLQW-Y---GHFEDFGNHNAFRFLDKYRDKYCTFNDDIQGTASVAVAGLMAGRRVTGKKISECRFLFL  216 (513)
Q Consensus       145 ---~~~~v~~-a~~~~-~---~qFEDF~~~NAfrlLerYR~~~~~FNDDIQGTgAVaLAGlLaAlr~tg~~l~d~rivf~  216 (513)
                         +.+++.+ ++..| +   .|||||+++|||++|+|||+++|||||||||||+|+||||+||+|++|++|+||||||+
T Consensus       209 yd~fvdefv~av~~~fGp~~~I~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~  288 (555)
T 1gq2_A          209 YDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQ  288 (555)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEE
T ss_pred             HHHHHHHHHHHHHHhhCCCcEEeecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEE
Confidence               3344444 44555 2   49999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC-----------------------------------------------------------------------------
Q psy14380        217 GAG-----------------------------------------------------------------------------  219 (513)
Q Consensus       217 GAG-----------------------------------------------------------------------------  219 (513)
                      |||                                                                             
T Consensus       289 GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S  368 (555)
T 1gq2_A          289 GAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVA  368 (555)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECS
T ss_pred             CCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEec
Confidence            999                                                                             


Q ss_pred             --------------------------------------------CceEEEeeCCCCCCccc-CCeeeccCCCcceeeccc
Q psy14380        220 --------------------------------------------EGRCIFASGSPFPPVKM-ETKTYYPGQGNNAYIFPG  254 (513)
Q Consensus       220 --------------------------------------------~GkalfAsGSPfp~V~~-~Gk~y~pgQ~NN~yiFPG  254 (513)
                                                                  +|+|||||||||+||+| +||+|+||||||+|+|||
T Consensus       369 ~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPG  448 (555)
T 1gq2_A          369 AIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPG  448 (555)
T ss_dssp             CCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHH
T ss_pred             CCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccc
Confidence                                                        69999999999999999 999999999999999999


Q ss_pred             cchheeccccccccHHHHHhhcCCCceeeeecCCceeeccCCCCCCCcCcccchheeehhccCCCCCcee
Q psy14380        255 VALGVIATGIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCL  324 (513)
Q Consensus       255 IgLGai~s~a~~Itd~m~~aAA~~l~~A~vVTdg~~Ilg~gDlG~~g~~~~vgKlsl~~A~agI~~a~~~  324 (513)
                      ||+|+++++|++|||+|+.+||+++  |.++++++  +.-|-+.|+-.-  +++++..+|.+++..|+--
T Consensus       449 i~~Gal~~~A~~Itd~M~~aAA~al--A~~v~~~~--~~~~~i~P~~~~--ir~vs~~VA~aVa~~A~~~  512 (555)
T 1gq2_A          449 VALGVISCGLKHIGDDVFLTTAEVI--AQEVSEEN--LQEGRLYPPLVT--IQQVSLKIAVRIAKEAYRN  512 (555)
T ss_dssp             HHHHHHHHTCSSCCHHHHHHHHHHH--HHTCCHHH--HHHTCSSCCGGG--HHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhhHhcCCeECCHHHHHHHHHHH--Hhcccccc--CCCCcccCCcch--hhHhHHHHHHHHHHHHHHc
Confidence            9999999999999999999999997  88988765  555666665322  3678888888888766543
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Back     alignment and structure
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Back     alignment and structure
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Back     alignment and structure
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Back     alignment and structure
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 513
d1o0sa2294 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent 2e-67
d1o0sa2294 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent 1e-38
d1o0sa2294 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent 9e-24
d1gq2a2257 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent 1e-66
d1gq2a2257 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent 5e-38
d1gq2a2257 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent 3e-24
d1gq2a2257 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent 4e-22
d1pj3a2259 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent 7e-65
d1pj3a2259 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent 1e-36
d1pj3a2259 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent 3e-24
d1pj3a2259 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent 3e-22
d1pj3a1294 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent 5e-18
d1pj3a1294 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent 4e-10
d1pj3a1 294 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent 4e-10
d1o0sa1308 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent 2e-16
d1o0sa1308 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent 4e-10
d1o0sa1 308 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent 4e-10
d1gq2a1298 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent 7e-15
d1gq2a1298 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent 5e-10
d1gq2a1 298 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent 5e-10
d1vl6a1222 c.2.1.7 (A:155-376) Malate oxidoreductase (malic e 5e-11
d1vl6a1 222 c.2.1.7 (A:155-376) Malate oxidoreductase (malic e 5e-11
d1vl6a1222 c.2.1.7 (A:155-376) Malate oxidoreductase (malic e 2e-04
d1vl6a2154 c.58.1.3 (A:1-154) Malate oxidoreductase (malic en 7e-04
d1k94a_165 a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta 0.004
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 294 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

 Score =  216 bits (553), Expect = 2e-67
 Identities = 93/141 (65%), Positives = 105/141 (74%), Gaps = 1/141 (0%)

Query: 263 GIHHITEDIFLIAAEPDVRAIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQ 322
            +  I   I     E DVRAIVVTDGERILGLGDLGA G+GIPVGKL+LY AL G++P  
Sbjct: 154 SVSKI-YQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKW 212

Query: 323 CLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAVVKRYGQNTLIQFEDF 382
           CLP+ +DVGTNN  LL DP Y+GLR KR  G+ YD L+D FMKA  K+YGQ TLIQFEDF
Sbjct: 213 CLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFEDF 272

Query: 383 GNHNAFRFLDKYRDKYCTFND 403
            N NAFR LDKY+DKY  FND
Sbjct: 273 ANPNAFRLLDKYQDKYTMFND 293
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 294 Back     information, alignment and structure
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 294 Back     information, alignment and structure
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 257 Back     information, alignment and structure
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 257 Back     information, alignment and structure
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 257 Back     information, alignment and structure
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 257 Back     information, alignment and structure
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 294 Back     information, alignment and structure
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 294 Back     information, alignment and structure
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 294 Back     information, alignment and structure
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 308 Back     information, alignment and structure
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 308 Back     information, alignment and structure
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 308 Back     information, alignment and structure
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 298 Back     information, alignment and structure
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 298 Back     information, alignment and structure
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 298 Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Length = 222 Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Length = 222 Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Length = 222 Back     information, alignment and structure
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Length = 154 Back     information, alignment and structure
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query513
d1gq2a2257 Mitochondrial NAD(P)-dependent malic enzyme {Domes 100.0
d1pj3a2259 Mitochondrial NAD(P)-dependent malic enzyme {Human 100.0
d1o0sa2294 Mitochondrial NAD(P)-dependent malic enzyme {Pig r 100.0
d1gq2a1298 Mitochondrial NAD(P)-dependent malic enzyme {Domes 99.98
d1o0sa1308 Mitochondrial NAD(P)-dependent malic enzyme {Pig r 99.97
d1pj3a1294 Mitochondrial NAD(P)-dependent malic enzyme {Human 99.97
d1vl6a1222 Malate oxidoreductase (malic enzyme) {Thermotoga m 99.95
d1vl6a2154 Malate oxidoreductase (malic enzyme) {Thermotoga m 99.85
d1gq2a2257 Mitochondrial NAD(P)-dependent malic enzyme {Domes 99.85
d1pj3a2259 Mitochondrial NAD(P)-dependent malic enzyme {Human 99.85
d1o0sa2294 Mitochondrial NAD(P)-dependent malic enzyme {Pig r 99.83
d1vl6a2154 Malate oxidoreductase (malic enzyme) {Thermotoga m 97.53
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=100.00  E-value=8.2e-69  Score=524.22  Aligned_cols=123  Identities=77%  Similarity=1.326  Sum_probs=118.9

Q ss_pred             eeeecCCceeeccCCCCCCCcCcccchheeehhccCCCCCceeceeeecCCCccccccCcccccccccCCChhhHHHHHH
Q psy14380        282 AIVVTDGERILGLGDLGACGMGIPVGKLSLYTALAGIKPHQCLPITIDVGTNNEKLLKDPLYVGLRQKRTTGEAYDELID  361 (513)
Q Consensus       282 A~vVTdg~~Ilg~gDlG~~g~~~~vgKlsl~~A~agI~~a~~~p~~~~~~~~~~~~~~d~~y~~~~~~~~~~~~~~~~~~  361 (513)
                      ..|||||+|||||||+|++||+||+||+++|+|+|||+|++||||+||+||||++||+||+|+|+|++|.+|++||+|||
T Consensus       135 ~iVVTDG~rILGlGD~G~~Gm~I~~gKl~lyta~~Gi~P~~~LPv~LDvGTnNe~LL~DP~YlG~R~~R~~g~eY~~fvd  214 (257)
T d1gq2a2         135 AIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLD  214 (257)
T ss_dssp             EEEEECSSSCGGGCCCGGGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHH
T ss_pred             EEEEecCceeeecCCcCcCccchhhhHHHHHHHhcCCCHhhcCCeeecCCCChHHHhcCcccccccCCCCcchHHHHHHH
Confidence            36999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccccccccCCccchhhcccccCceeeeecCCCcccccccCcccccccccccccchhhHHHHHHHHHH
Q psy14380        362 EFMKAVVKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDEGTNNEKLLKDPLYVGLRQKRTTGEAYDELIDEFMKAV  441 (513)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~v  441 (513)
                      |||+|++++|                                                                      
T Consensus       215 efv~av~~~~----------------------------------------------------------------------  224 (257)
T d1gq2a2         215 EFMEAVTSRY----------------------------------------------------------------------  224 (257)
T ss_dssp             HHHHHHHHHH----------------------------------------------------------------------
T ss_pred             HHHHHHHHhC----------------------------------------------------------------------
Confidence            9999999999                                                                      


Q ss_pred             HhhcCCceeeeeccCCCccHHHHHHHhhccCCeeccC
Q psy14380        442 VKRYGQNTLIQFEDFGNHNAFRFLDKYRDKYCTFNDD  478 (513)
Q Consensus       442 ~~~~g~~~~~~~ed~~~~~~~~~l~~~~~~~~~~~dd  478 (513)
                          |++++||||||+++|||++|+|||+++||||||
T Consensus       225 ----p~~~~i~~EDf~~~na~~~L~~yr~~~~~FNDD  257 (257)
T d1gq2a2         225 ----GMNCLIQFEDFANANAFRLLHKYRNKYCTFNDD  257 (257)
T ss_dssp             ----CTTCEEEECSCCHHHHHHHHHHHTTTSEEEETT
T ss_pred             ----CCCCEEehhhcCCchHHHHHHHHccCCCccCCC
Confidence                479999999999999999999999999999998
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Back     information, alignment and structure
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Back     information, alignment and structure
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Back     information, alignment and structure
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Back     information, alignment and structure
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Back     information, alignment and structure
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure