Psyllid ID: psy14430
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 497 | ||||||
| 332030520 | 519 | Nucleolar complex protein 4-like protein | 0.961 | 0.921 | 0.389 | 8e-92 | |
| 322785839 | 519 | hypothetical protein SINV_07970 [Solenop | 0.965 | 0.924 | 0.390 | 9e-92 | |
| 157136067 | 514 | nucleolar complex protein [Aedes aegypti | 0.933 | 0.902 | 0.387 | 4e-88 | |
| 91093162 | 491 | PREDICTED: similar to nucleolar complex | 0.919 | 0.930 | 0.385 | 1e-85 | |
| 307210163 | 522 | Nucleolar complex protein 4-like protein | 0.971 | 0.925 | 0.370 | 2e-85 | |
| 383848593 | 523 | PREDICTED: nucleolar complex protein 4 h | 0.973 | 0.925 | 0.376 | 3e-84 | |
| 340711475 | 523 | PREDICTED: nucleolar complex protein 4 h | 0.973 | 0.925 | 0.376 | 6e-83 | |
| 66513683 | 522 | PREDICTED: nucleolar complex protein 4 h | 0.973 | 0.927 | 0.374 | 2e-82 | |
| 350416264 | 523 | PREDICTED: nucleolar complex protein 4 h | 0.973 | 0.925 | 0.376 | 3e-82 | |
| 307168548 | 531 | Nucleolar complex protein 4-like protein | 0.977 | 0.915 | 0.376 | 3e-82 |
| >gi|332030520|gb|EGI70208.1| Nucleolar complex protein 4-like protein B [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 199/511 (38%), Positives = 303/511 (59%), Gaps = 33/511 (6%)
Query: 7 LKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLKKHAMSSQTSEDQ 66
L+++ EFL++RK++NNL+EI++ D+ + LL I+ +FVE+LK+ M + +
Sbjct: 21 LRQRAQEFLASRKHANNLLEIISHWDEATS---SCLLTIETIFVEVLKRSDMYMENTIAL 77
Query: 67 DKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLS 126
+ E +Y WLR+CY+ ++ K+ + +Q+Q +T M L+ E K L
Sbjct: 78 TISEPSPESRYTTWLRNCYEEIWKKVLVSMEKSRLAIQLQALTTAMKLMAEEGK---ALM 134
Query: 127 KP-------FPEDKLQMLIKNILSSPFYPV-FVERFKEYLSFKDVIFYSFKSMSTLLSEN 178
+P FP +L+ ++ +LS + RF+E S DV++Y+++ + +L +
Sbjct: 135 EPRDNPGYHFPLHRLKPILMTLLSPEKDNTNLISRFQEITSCPDVLYYTWRCLPSLTPKR 194
Query: 179 FVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLAL-----NIKDFCTFS 233
E + N+L I +IP+P +E +E K E LCG + A N+K
Sbjct: 195 -QPKEVYIKNLLELIDKIPLPKEEEASKVSEHK--ELLCGPQDAAFTWDQSNVKRAL--- 248
Query: 234 SKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQG 293
+K+W + W+ T + K LL+VL+++++ + PI++TDFLM++L GP+ VLALQG
Sbjct: 249 NKVWACIMHWE-LTPQLHKQLLIVLLERVISHLEKPILLTDFLMDSLDADGPVGVLALQG 307
Query: 294 MVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKR 353
+ LV ++NLEYPNI+ KLY++ EP IF+TKYKARLFYL+DL + STHLPE LVA+F KR
Sbjct: 308 VFILVTKHNLEYPNIFTKLYSMFEPEIFHTKYKARLFYLSDLFLSSTHLPEALVAAFAKR 367
Query: 354 LSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQN-------SDATMLEDDPFDAKQED 406
L+RL L APP+DI I++ +GNL+LRH GL L + S+A+ DPF ++ D
Sbjct: 368 LARLTLVAPPEDILIILLFVGNLLLRHPGLKRLIDHPQGGEAPSNASTGAGDPFLMEERD 427
Query: 407 PYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFK 466
P +NAL SSLWEI+ LQ H L ++ ARFI PLP+VE+D+ + LE +F E K
Sbjct: 428 PLLSNALFSSLWEIRALQWHILPSIASAARFIREPLPSVEYDMASALERTGGHLFESELK 487
Query: 467 KKQKNISTNFEKPSDMFQPTVTKLFDHFSLV 497
K K I FE+PS M P KL ++ L
Sbjct: 488 NKVKEIMLTFERPSSMALPKGEKLLQYWQLT 518
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322785839|gb|EFZ12458.1| hypothetical protein SINV_07970 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|157136067|ref|XP_001656754.1| nucleolar complex protein [Aedes aegypti] gi|108881122|gb|EAT45347.1| AAEL003367-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|91093162|ref|XP_967461.1| PREDICTED: similar to nucleolar complex protein [Tribolium castaneum] gi|270012948|gb|EFA09396.1| hypothetical protein TcasGA2_TC004314 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|307210163|gb|EFN86836.1| Nucleolar complex protein 4-like protein B [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|383848593|ref|XP_003699933.1| PREDICTED: nucleolar complex protein 4 homolog [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|340711475|ref|XP_003394301.1| PREDICTED: nucleolar complex protein 4 homolog B-like isoform 1 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|66513683|ref|XP_394878.2| PREDICTED: nucleolar complex protein 4 homolog B-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|350416264|ref|XP_003490892.1| PREDICTED: nucleolar complex protein 4 homolog B-like isoform 1 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|307168548|gb|EFN61606.1| Nucleolar complex protein 4-like protein B [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 497 | ||||||
| UNIPROTKB|F1P3D2 | 519 | EP400 "Uncharacterized protein | 0.975 | 0.934 | 0.323 | 4.5e-66 | |
| UNIPROTKB|Q5ZJC7 | 508 | NOC4L "Nucleolar complex prote | 0.969 | 0.948 | 0.323 | 8.5e-65 | |
| FB|FBgn0029672 | 497 | CG2875 [Drosophila melanogaste | 0.835 | 0.835 | 0.343 | 3.4e-61 | |
| ZFIN|ZDB-GENE-050522-98 | 525 | noc4l "nucleolar complex assoc | 0.979 | 0.927 | 0.308 | 3.4e-61 | |
| UNIPROTKB|F1RFR4 | 516 | NOC4L "Uncharacterized protein | 0.907 | 0.874 | 0.311 | 9.6e-57 | |
| UNIPROTKB|Q9BVI4 | 516 | NOC4L "Nucleolar complex prote | 0.921 | 0.887 | 0.312 | 2e-56 | |
| UNIPROTKB|F1Q279 | 516 | NOC4L "Uncharacterized protein | 0.897 | 0.864 | 0.322 | 5.3e-56 | |
| RGD|1310661 | 516 | Noc4l "nucleolar complex assoc | 0.915 | 0.881 | 0.307 | 8.6e-56 | |
| MGI|MGI:2140843 | 516 | Noc4l "nucleolar complex assoc | 0.917 | 0.883 | 0.306 | 3.7e-55 | |
| UNIPROTKB|F1MFW8 | 411 | NOC4L "Uncharacterized protein | 0.706 | 0.854 | 0.312 | 6.7e-49 |
| UNIPROTKB|F1P3D2 EP400 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 165/510 (32%), Positives = 274/510 (53%)
Query: 7 LKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQ---RLFVELLKK---HAMSS 60
L + L +R +N + EIL L K + + L + RLF +L++ A S
Sbjct: 14 LAASLEAVLGDRGNANRVFEILELL--AAKEEEDVLCAARTCRRLFAAMLRRGELFAGSL 71
Query: 61 QTSEDQDKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAK 120
ED + +AEEKYK+W+R Y L ++L + +V+ + TLM V+ EA+
Sbjct: 72 PAEEDALRGNYSAEEKYKIWMRHRYNDCVESLSELLGHDSFQVKESSLCTLMKFVELEAE 131
Query: 121 YPITLSK-----PFPEDKLQMLIKNILSSPFYP---VFVERFKEYLSFKDVIFYSFKSMS 172
P+ + FP L++++ ++ P + + + RF+EY+ ++DV ++ K+++
Sbjct: 132 CPLVAEQWKGSIAFPRHLLKVVVNGLI--PIHEDASLLISRFQEYMEYEDVRYFVMKAVT 189
Query: 173 TLLSENFVENEE----ILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALN-IK 227
+ + + +E + NV + I I +PN + + K L E ++ ++
Sbjct: 190 ESIGQVMQKIKELDPPVWQNVFSLISPINMPNKERDMVKFMMKQAFSLDNREEWKVSKLQ 249
Query: 228 DFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIA 287
++W K + S K +L++L D ++ Y + P ++ DFL A G I+
Sbjct: 250 AHKQAFERMWLTFLKHQ-LPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAIS 308
Query: 288 VLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLV 347
+LAL G+ L+ Q+NLEYP+ Y KLY+LL+P+I++ KY+AR F+L DL + S+HLP LV
Sbjct: 309 LLALNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLV 368
Query: 348 ASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATM-LEDDPFDAKQED 406
A+FIKRLSRL LTAPP+ + ++I I NL RH +L + L +DP+ +QE+
Sbjct: 369 AAFIKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSEDPYIMEQEE 428
Query: 407 PYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFK 466
P + AL+SSLWE++ LQNH V A +N L +E D+ LE++ E+F+KE K
Sbjct: 429 PSESRALESSLWELQSLQNHYHPDVAQAAAILNQSLSEIEDDISGLLELSASELFDKEIK 488
Query: 467 KKQKNISTNFEKPSDMFQPTVTKLFDHFSL 496
K N+ FE+ +F + +HF+L
Sbjct: 489 KTSANVPLEFEQVRGLFGKKNDIIAEHFAL 518
|
|
| UNIPROTKB|Q5ZJC7 NOC4L "Nucleolar complex protein 4 homolog" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0029672 CG2875 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050522-98 noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RFR4 NOC4L "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9BVI4 NOC4L "Nucleolar complex protein 4 homolog" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1Q279 NOC4L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|1310661 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2140843 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MFW8 NOC4L "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 497 | |||
| pfam03914 | 151 | pfam03914, CBF, CBF/Mak21 family | 1e-43 |
| >gnl|CDD|217788 pfam03914, CBF, CBF/Mak21 family | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 1e-43
Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query: 286 IAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLF-YLTDLLMMSTHLPE 344
++LAL + L+ +NL+ Y KLY LL + ++ YK+RLF L D + S HLP
Sbjct: 1 TSILALFLLFQLMSGHNLDLDRFYRKLYRLLLDKLLHSSYKSRLFLRLLDKALKSDHLPA 60
Query: 345 GLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQ 404
VA+F+KRL +L L APP ++ LI NL+ RH L L + ED P+D ++
Sbjct: 61 QRVAAFVKRLLQLALHAPPSFALGILPLIRNLLKRHPNLKSLLHTEERG-GEDGPYDPEE 119
Query: 405 EDPYHTNALKSSLWEIKMLQNH 426
DP ++NAL SSLWE+++LQNH
Sbjct: 120 RDPEYSNALNSSLWELELLQNH 141
|
Length = 151 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 497 | |||
| KOG2154|consensus | 505 | 100.0 | ||
| KOG2038|consensus | 988 | 100.0 | ||
| COG5117 | 657 | NOC3 Protein involved in the nuclear export of pre | 100.0 | |
| KOG2153|consensus | 704 | 100.0 | ||
| COG5593 | 821 | Nucleic-acid-binding protein possibly involved in | 100.0 | |
| PF03914 | 164 | CBF: CBF/Mak21 family; InterPro: IPR005612 This do | 100.0 | |
| PF07540 | 95 | NOC3p: Nucleolar complex-associated protein; Inter | 99.66 | |
| KOG2153|consensus | 704 | 97.86 | ||
| PTZ00429 | 746 | beta-adaptin; Provisional | 90.64 |
| >KOG2154|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-86 Score=678.10 Aligned_cols=480 Identities=31% Similarity=0.449 Sum_probs=424.6
Q ss_pred chHHHHHHHHHHhhCccccccHHHHHHhhccCCC-cHHHHHHHHHHHHHHHhhcCCCCCCcchhhhhhhHHHHHHHHHHH
Q psy14430 3 GQINLKKKINEFLSNRKYSNNLIEILACLDDVNK-VKPNTLLGIQRLFVELLKKHAMSSQTSEDQDKKIKAAEEKYKVWL 81 (497)
Q Consensus 3 ~k~~i~~l~~~ile~~~n~n~l~~Ll~~~~~~~~-~~~~a~~sL~~vF~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~wL 81 (497)
++..++...+.|+.+...+|+..++...++++.+ ..+.+..+++++|..++.+|.+..+ ..++.....++|..|+
T Consensus 16 ~~~~l~~~~nsll~s~~e~~~~~d~~~~l~~E~p~~~~~~~~~~~~~f~~ll~~gll~~P----s~~ks~~~~~~~k~w~ 91 (505)
T KOG2154|consen 16 TKKALQSLLNSLLTSRSEINNLPDLLTFLEDETPKNFVVAVALSVQSFFKLLLRGLLPRP----SSTKSEDGEEKFKNWL 91 (505)
T ss_pred HHHHHHhhhhhhhhHHHhhccchhhhhhhcccCchhHHHHHHHHHHHHHHHHHcCCCCCC----chhcccchHHHHHHHH
Confidence 3566778888899988899999999999887776 6778888999999999999987532 2223333448999999
Q ss_pred HHHHHHHHHHHHHhhccCccc-hHHHHHHHHHHHHHhhcCCCCCCCCCCchHHHHHHHHHhhCCCCchhHHHHHHHhhhc
Q psy14430 82 RDCYKSLFPKLFDILFNGESE-VQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSF 160 (497)
Q Consensus 82 ~~~Y~~~~~~L~~~~~~~~~~-~~~~al~~~~~Ll~~e~~~~~~~~~~F~~~ll~~lV~~Ll~~~~~~~~i~~~~e~~~~ 160 (497)
+.+|.+|+..|.+++.+.... .+..++...|+|.+.++.|...+...||+.+|+.++..|++++ .++..|.+...|
T Consensus 92 r~~y~e~~~kL~eils~~s~e~l~l~~l~~~~ql~~~e~l~~~~~~g~fp~~~f~~l~~~LisSd---v~it~f~e~~~~ 168 (505)
T KOG2154|consen 92 RKKYEEFVKKLLEILSSQSFEDLGLSGLLLGTQLEKVESLHGIAENGGFPNSIFHRLLDALISSD---VDITIFLENVGY 168 (505)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhhhcccccccccCCcHHHHHHHHHHHhccc---ccHHHHHHhccc
Confidence 999999999999999876533 4778888889999999998777667899999999999999993 467777666677
Q ss_pred CChHHHHHHHHHHHh----hhcccchHHHHHHHHHHhcccCCCCCccccccchhhhhhhccc-ccchhcchHHHHhHHHH
Q psy14430 161 KDVIFYSFKSMSTLL----SENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCG-NESLALNIKDFCTFSSK 235 (497)
Q Consensus 161 ~dv~~~~~~~l~~~l----~~~~~~~~~~~~n~l~lL~~l~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 235 (497)
.|.+|..+...-+.+ .+.....+....|.+.+++.+++|...... ..++.. .+++..+++++|+.|+.
T Consensus 169 t~k~f~~~~~~~~~~~s~~~q~~~Dp~v~~~N~~~~ls~v~~p~~~~S~-------~~~~~~~~p~~~~~~~~~~k~f~~ 241 (505)
T KOG2154|consen 169 TDKYFKYFDITLTQVRSVVPQHPTDPPVIANNELEILSLVSLPLSVSST-------SSYVLEPIPKQTENEKQIRKSFQN 241 (505)
T ss_pred hhHHHHHHHHHHHHHHHhccCCCCCCchhhcchHHHhhhccCCCCcccH-------hhhccccCccccccHHHHHHHHHH
Confidence 888888777543333 322233567778999999999988764311 223333 35666888899999999
Q ss_pred HHHHHhccCCCChhHHHHHHHHhhhhhhccCCCchhhHHHHHHHhc-CChhHHHHHHHHHHHHHhhcCCCchhHHHHHHh
Q psy14430 236 IWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALS-FKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYA 314 (497)
Q Consensus 236 ~w~~~l~~~~l~~~l~~~vL~~l~~~~~p~~~~p~~l~Dfl~~~~~-~~~~~sllaL~~lF~L~~~~nld~~~FY~~LY~ 314 (497)
+|+++++.+ ++.++|++||.++++||+||+..|..++|||+|+|| .||.+|++||+|||.||++||++||+||.+||+
T Consensus 242 ~Wls~l~~~-ls~~lykkil~vih~rvip~l~~P~kl~DFLtdsyd~~~g~vslLALngLF~Lm~khNleYP~FY~KLY~ 320 (505)
T KOG2154|consen 242 MWLSSLNGE-LSLKLYKKILLVIHKRVIPHLISPTKLMDFLTDSYDDIGGVVSLLALNGLFILMTKHNLEYPDFYEKLYA 320 (505)
T ss_pred HHHHHhcCc-CcHHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHhccCCchhHHHHhHHHHHHHHcCCCCchHHHHHHH
Confidence 999999999 999999999999999999999999999999999998 899999999999999999999999999999999
Q ss_pred hhCCCccccchhhhHHHHHHHHHhcCCCChHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHhcccccccccCcccCC
Q psy14430 315 LLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATM 394 (497)
Q Consensus 315 lL~p~~~~~~~r~~~l~L~dlflss~~~~~~rvaAFiKRL~~lsL~~pp~~~~~~L~li~~Ll~~~p~l~~Ll~~~~~~~ 394 (497)
|++|+++|.+||+|||||+|+|++|+|+|++.||||+|||+|+||.+||.+++.+++||+||++|||+|+.|+|++...+
T Consensus 321 Ll~Pslfh~KyRarff~L~D~FLSSTHLpa~LvAsFlKrLaRlaL~APpeA~~~vipfI~Nll~rHp~c~~lvhr~~~~~ 400 (505)
T KOG2154|consen 321 LLNPSLFHVKYRARFFRLADLFLSSTHLPAYLVASFLKRLARLALEAPPEAIVIVIPFICNLLRRHPNCQPLVHRSHALS 400 (505)
T ss_pred hcCchHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHhCCchhhhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CCCCCCCCCCCCCCCCCCCccchhhHHHhccCCChhHHHHHHHhhCCCCCCccCcccccCCCHHHHHHHHHhccCC-CCc
Q psy14430 395 LEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQK-NIS 473 (497)
Q Consensus 395 ~~~~~y~~~~~dP~~snA~~s~LWEL~~L~~HyhP~V~~~A~~l~~~~~~~~~~~~~~ld~~~~~~~~~e~~~~~k-~~~ 473 (497)
..+||||+++.||..|+|++||||||.+||.||||+|+..|+.+.+++++++|+++|++|++|..++|.|++++.| .+|
T Consensus 401 ~~~Dpfd~~EtDP~ks~ALeSSLWEL~~Lq~Hy~p~Va~~A~~~~q~~~k~ef~~ed~ld~~y~~l~d~el~~kgk~~p~ 480 (505)
T KOG2154|consen 401 LYDDPFDNDETDPKKSGALESSLWELELLQTHYHPEVAKAASFFNQSLYKPEFGLEDGLDSKYSVLQDGELSRKGKRFPP 480 (505)
T ss_pred CCCCCCCCCCCChhhhhhHHHHHHHHHHHHHhhcHHHHHHHHHHhccCccccccCcchhhhhhHHhhcchhhcccCCCCC
Confidence 6779999999999999999999999999999999999999999999999999999999999999999999999998 577
Q ss_pred ccccCCCCCCCCCccccccccccC
Q psy14430 474 TNFEKPSDMFQPTVTKLFDHFSLV 497 (497)
Q Consensus 474 l~~~~~~~~~~~~~~~~~~~w~~~ 497 (497)
++|+++++++++.++..+++|+++
T Consensus 481 lefe~~t~~~g~~~e~~s~~~~li 504 (505)
T KOG2154|consen 481 LEFERRTGLGGRFHELSSKSNVLI 504 (505)
T ss_pred cccccccccCCchhhHHHhhhccC
Confidence 999999999999999999999875
|
|
| >KOG2038|consensus | Back alignment and domain information |
|---|
| >COG5117 NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG2153|consensus | Back alignment and domain information |
|---|
| >COG5593 Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF03914 CBF: CBF/Mak21 family; InterPro: IPR005612 This domain is present in the CAATT-binding protein which is essential for growth and necessary for 60S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >PF07540 NOC3p: Nucleolar complex-associated protein; InterPro: IPR011501 Nucleolar complex-associated protein (Noc3p, Q07896 from SWISSPROT) is conserved in eukaryotes and plays essential roles in replication and rRNA processing in Saccharomyces cerevisiae [] | Back alignment and domain information |
|---|
| >KOG2153|consensus | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 497 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 1e-09
Identities = 75/445 (16%), Positives = 134/445 (30%), Gaps = 150/445 (33%)
Query: 129 FPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMN 188
F + Q K+IL VF + F + KDV ++LS+ E + I+M+
Sbjct: 9 FETGEHQYQYKDIL-----SVFEDAFVDNFDCKDVQ----DMPKSILSKE--EIDHIIMS 57
Query: 189 VLNFIKEIPIPNNKEK---LF-----PAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVL 240
+ LF E ++F+ E L +N K + ++
Sbjct: 58 ----------KDAVSGTLRLFWTLLSKQEEMVQKFV--EEVLRINYK---------F-LM 95
Query: 241 SKWKGHTSESTKLLLMVL--IDKLMYYHSNPIVITDF---------LMNALSFKGPIAVL 289
S K + + + M + D+L Y+ N + L AL P +
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDRL--YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153
Query: 290 ALQGM---------VNLVRQYNLE--YPN-IY-----------------DKLYALLEPNI 320
+ G+ +++ Y ++ I+ KL ++PN
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 321 -----FYTKYKARLFYLTD---LLMMSTHLPEGLV-------ASFIKRLSRLC---LTAP 362
+ K R+ + L+ S L+ A + C LT
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT- 272
Query: 363 PQDIAIMIYLIGN------LVLRHKGLTI-----LFQNSDATMLEDDPFDAKQEDPYHTN 411
+ + +L L LT L L+ P D +E
Sbjct: 273 -RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL----LKYLDCRPQDLPRE------ 321
Query: 412 ALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQKN 471
+L +P + + WD N+ VN D+ +
Sbjct: 322 ----------VLTTNPRRLSIIAESIRDGLA---TWD--NWKHVNCDK-LTTIIES---- 361
Query: 472 ISTNFEKPSDMFQPTVTKLFDHFSL 496
S N +P++ K+FD S+
Sbjct: 362 -SLNVLEPAEY-----RKMFDRLSV 380
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00