Psyllid ID: psy14430


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------
MAGQINLKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLKKHAMSSQTSEDQDKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQKNISTNFEKPSDMFQPTVTKLFDHFSLV
cccHHHHHHHHHHHHHccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHccHHHcccccHHHHHHHHHHHcccccccccccccHHccHHHHHHHHHHccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHHHHHccHHHHHHHHHHHHcccccEEEEcccHcccccHHHHHHHHHHc
MAGQINLKKKINEFLSNRKYSNNLIEILACLddvnkvkpntLLGIQRLFVELLKKHamssqtseDQDKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQgeakypitlskpfpedKLQMLIKNilsspfypVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFikeipipnnkeklfpaeakseeflcgneslALNIKDFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLmyyhsnpiVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRlcltappqDIAIMIYLIGNLVLrhkgltilfqnsdatmleddpfdakqedpyhtnaLKSSLWEIKmlqnhplytvnvparfinnplpnvewdlgnyleVNYDEIFNKEFKKKQKNIstnfekpsdmfqptvtklfdhfslv
MAGQINLKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLKKHamssqtsedqdkKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVLskwkghtseSTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQKNISTnfekpsdmfqptvtklfdhfslv
MAGQINLKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLKKHAMSSQTSEDQDKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQKNISTNFEKPSDMFQPTVTKLFDHFSLV
**********INEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLK********************EKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDAT**************YHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEF********************************
***QINL**KINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLK**********************YKVWLRDCYKSLFPKLFDILFNGE*EVQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFIKEIP***********************************SSKIWEVLS************LLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNP*********NYLEVNYDEIFNKEFKKKQKNISTNFEKPSDMFQPTVTKLFDHFSLV
MAGQINLKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLKK**************IKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQKNISTNFEKPSDMFQPTVTKLFDHFSLV
**GQINLKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLKKHAMSS**********KAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQKNISTNFEKPSDMFQPTVTKLFDHFSLV
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MAGQINLKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLKKHAMSSQTSEDQDKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQKNISTNFEKPSDMFQPTVTKLFDHFSLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query497 2.2.26 [Sep-21-2011]
Q5ZJC7508 Nucleolar complex protein yes N/A 0.937 0.917 0.323 7e-67
Q6NU91525 Nucleolar complex protein N/A N/A 0.931 0.881 0.329 2e-63
Q4VBT2525 Nucleolar complex protein yes N/A 0.983 0.931 0.306 3e-61
Q6NRQ2526 Nucleolar complex protein N/A N/A 0.901 0.851 0.325 1e-60
Q5I0I8516 Nucleolar complex protein yes N/A 0.917 0.883 0.306 3e-58
Q8BHY2516 Nucleolar complex protein yes N/A 0.917 0.883 0.307 3e-57
Q9BVI4516 Nucleolar complex protein yes N/A 0.921 0.887 0.303 8e-55
Q06512552 Nucleolar complex protein yes N/A 0.865 0.778 0.283 5e-40
O94372485 Uncharacterized protein C yes N/A 0.438 0.449 0.390 1e-36
P41843504 Uncharacterized protein T yes N/A 0.358 0.353 0.376 1e-27
>sp|Q5ZJC7|NOC4L_CHICK Nucleolar complex protein 4 homolog OS=Gallus gallus GN=NOC4L PE=2 SV=1 Back     alignment and function desciption
 Score =  255 bits (651), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 170/526 (32%), Positives = 273/526 (51%), Gaps = 60/526 (11%)

Query: 7   LKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLG---IQRLFVELLKKH---AMSS 60
           L   +   L +R  +N + EIL  L    K + + L      +RLF  LL++    A S 
Sbjct: 6   LAASLEAVLGDRGNANRVFEILELL--AAKEEEDVLCAARTCRRLFAALLRRGELFAGSL 63

Query: 61  QTSEDQDKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAK 120
              ED  +   +AEEKYK+W+R  Y      L ++L +   +V+  +  TLM  V+ EA+
Sbjct: 64  PAEEDALRGNYSAEEKYKIWMRHRYNDCVESLSELLGHDSFQVKESSLCTLMKFVELEAE 123

Query: 121 YPITL-----SKPFPEDKLQMLIKNILSSPFY---PVFVERFKEYLSFKDVIFYSFKSMS 172
            P+       S  FP   L++++  ++  P +    + + RF+EY+ ++DV ++  K ++
Sbjct: 124 CPLVAEQWKGSIAFPRHLLKVVVNGLI--PIHEDASLLISRFQEYMEYEDVRYFVMKVVT 181

Query: 173 TLLSENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALNIKDFCTF 232
                      E +  V+  IKE P+P  ++ +F         L    ++    +D   F
Sbjct: 182 -----------ESIGQVMQKIKERPLPFYQQNVFS--------LISPINMPNKERDMVKF 222

Query: 233 SSKI-----WEVLSKWKGHTSESTKL----------------LLMVLIDKLMYYHSNPIV 271
             K      W+V SK + H     ++                +L++L D ++ Y + P +
Sbjct: 223 MMKQDNREEWKV-SKLQAHKQAFERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTL 281

Query: 272 ITDFLMNALSFKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFY 331
           + DFL  A    G I++LAL G+  L+ Q+NLEYP+ Y KLY+LL+P+I++ KY+AR F+
Sbjct: 282 MIDFLTVAYGVGGAISLLALNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFH 341

Query: 332 LTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSD 391
           L DL + S+HLP  LVA+FIKRLSRL LTAPP+ + ++I  I NL  RH    +L    +
Sbjct: 342 LADLFLSSSHLPAYLVAAFIKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPN 401

Query: 392 ATM-LEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLG 450
               L +DP+  +QE+P  + AL+SSLWE++ LQNH    V   A  +N  L  +E D+ 
Sbjct: 402 GPQDLSEDPYIMEQEEPSESRALESSLWELQSLQNHYHPDVAQAAAILNQSLSEIEDDIS 461

Query: 451 NYLEVNYDEIFNKEFKKKQKNISTNFEKPSDMFQPTVTKLFDHFSL 496
             LE++  E+F+KE KK   N+   FE+   +F      + +HF+L
Sbjct: 462 GLLELSASELFDKEIKKTSANVPLEFEQVRGLFGKKNDIIAEHFAL 507





Gallus gallus (taxid: 9031)
>sp|Q6NU91|NOC4B_XENLA Nucleolar complex protein 4 homolog B OS=Xenopus laevis GN=noc4l-b PE=2 SV=1 Back     alignment and function description
>sp|Q4VBT2|NOC4L_DANRE Nucleolar complex protein 4 homolog OS=Danio rerio GN=noc4l PE=2 SV=1 Back     alignment and function description
>sp|Q6NRQ2|NOC41_XENLA Nucleolar complex protein 4 homolog A OS=Xenopus laevis GN=noc4l-a PE=2 SV=1 Back     alignment and function description
>sp|Q5I0I8|NOC4L_RAT Nucleolar complex protein 4 homolog OS=Rattus norvegicus GN=Noc4l PE=2 SV=1 Back     alignment and function description
>sp|Q8BHY2|NOC4L_MOUSE Nucleolar complex protein 4 homolog OS=Mus musculus GN=Noc4l PE=2 SV=1 Back     alignment and function description
>sp|Q9BVI4|NOC4L_HUMAN Nucleolar complex protein 4 homolog OS=Homo sapiens GN=NOC4L PE=1 SV=1 Back     alignment and function description
>sp|Q06512|NOC4_YEAST Nucleolar complex protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOC4 PE=1 SV=1 Back     alignment and function description
>sp|O94372|YG06_SCHPO Uncharacterized protein C1604.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1604.06c PE=3 SV=1 Back     alignment and function description
>sp|P41843|YO93_CAEEL Uncharacterized protein T20B12.3 OS=Caenorhabditis elegans GN=T20B12.3 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query497
332030520519 Nucleolar complex protein 4-like protein 0.961 0.921 0.389 8e-92
322785839519 hypothetical protein SINV_07970 [Solenop 0.965 0.924 0.390 9e-92
157136067514 nucleolar complex protein [Aedes aegypti 0.933 0.902 0.387 4e-88
91093162491 PREDICTED: similar to nucleolar complex 0.919 0.930 0.385 1e-85
307210163522 Nucleolar complex protein 4-like protein 0.971 0.925 0.370 2e-85
383848593523 PREDICTED: nucleolar complex protein 4 h 0.973 0.925 0.376 3e-84
340711475523 PREDICTED: nucleolar complex protein 4 h 0.973 0.925 0.376 6e-83
66513683522 PREDICTED: nucleolar complex protein 4 h 0.973 0.927 0.374 2e-82
350416264523 PREDICTED: nucleolar complex protein 4 h 0.973 0.925 0.376 3e-82
307168548531 Nucleolar complex protein 4-like protein 0.977 0.915 0.376 3e-82
>gi|332030520|gb|EGI70208.1| Nucleolar complex protein 4-like protein B [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  343 bits (881), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 199/511 (38%), Positives = 303/511 (59%), Gaps = 33/511 (6%)

Query: 7   LKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQRLFVELLKKHAMSSQTSEDQ 66
           L+++  EFL++RK++NNL+EI++  D+      + LL I+ +FVE+LK+  M  + +   
Sbjct: 21  LRQRAQEFLASRKHANNLLEIISHWDEATS---SCLLTIETIFVEVLKRSDMYMENTIAL 77

Query: 67  DKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAKYPITLS 126
                + E +Y  WLR+CY+ ++ K+   +      +Q+Q  +T M L+  E K    L 
Sbjct: 78  TISEPSPESRYTTWLRNCYEEIWKKVLVSMEKSRLAIQLQALTTAMKLMAEEGK---ALM 134

Query: 127 KP-------FPEDKLQMLIKNILSSPFYPV-FVERFKEYLSFKDVIFYSFKSMSTLLSEN 178
           +P       FP  +L+ ++  +LS        + RF+E  S  DV++Y+++ + +L  + 
Sbjct: 135 EPRDNPGYHFPLHRLKPILMTLLSPEKDNTNLISRFQEITSCPDVLYYTWRCLPSLTPKR 194

Query: 179 FVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLAL-----NIKDFCTFS 233
               E  + N+L  I +IP+P  +E    +E K  E LCG +  A      N+K      
Sbjct: 195 -QPKEVYIKNLLELIDKIPLPKEEEASKVSEHK--ELLCGPQDAAFTWDQSNVKRAL--- 248

Query: 234 SKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIAVLALQG 293
           +K+W  +  W+  T +  K LL+VL+++++ +   PI++TDFLM++L   GP+ VLALQG
Sbjct: 249 NKVWACIMHWE-LTPQLHKQLLIVLLERVISHLEKPILLTDFLMDSLDADGPVGVLALQG 307

Query: 294 MVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKR 353
           +  LV ++NLEYPNI+ KLY++ EP IF+TKYKARLFYL+DL + STHLPE LVA+F KR
Sbjct: 308 VFILVTKHNLEYPNIFTKLYSMFEPEIFHTKYKARLFYLSDLFLSSTHLPEALVAAFAKR 367

Query: 354 LSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQN-------SDATMLEDDPFDAKQED 406
           L+RL L APP+DI I++  +GNL+LRH GL  L  +       S+A+    DPF  ++ D
Sbjct: 368 LARLTLVAPPEDILIILLFVGNLLLRHPGLKRLIDHPQGGEAPSNASTGAGDPFLMEERD 427

Query: 407 PYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFK 466
           P  +NAL SSLWEI+ LQ H L ++   ARFI  PLP+VE+D+ + LE     +F  E K
Sbjct: 428 PLLSNALFSSLWEIRALQWHILPSIASAARFIREPLPSVEYDMASALERTGGHLFESELK 487

Query: 467 KKQKNISTNFEKPSDMFQPTVTKLFDHFSLV 497
            K K I   FE+PS M  P   KL  ++ L 
Sbjct: 488 NKVKEIMLTFERPSSMALPKGEKLLQYWQLT 518




Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785839|gb|EFZ12458.1| hypothetical protein SINV_07970 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|157136067|ref|XP_001656754.1| nucleolar complex protein [Aedes aegypti] gi|108881122|gb|EAT45347.1| AAEL003367-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|91093162|ref|XP_967461.1| PREDICTED: similar to nucleolar complex protein [Tribolium castaneum] gi|270012948|gb|EFA09396.1| hypothetical protein TcasGA2_TC004314 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|307210163|gb|EFN86836.1| Nucleolar complex protein 4-like protein B [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383848593|ref|XP_003699933.1| PREDICTED: nucleolar complex protein 4 homolog [Megachile rotundata] Back     alignment and taxonomy information
>gi|340711475|ref|XP_003394301.1| PREDICTED: nucleolar complex protein 4 homolog B-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|66513683|ref|XP_394878.2| PREDICTED: nucleolar complex protein 4 homolog B-like [Apis mellifera] Back     alignment and taxonomy information
>gi|350416264|ref|XP_003490892.1| PREDICTED: nucleolar complex protein 4 homolog B-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|307168548|gb|EFN61606.1| Nucleolar complex protein 4-like protein B [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query497
UNIPROTKB|F1P3D2519 EP400 "Uncharacterized protein 0.975 0.934 0.323 4.5e-66
UNIPROTKB|Q5ZJC7508 NOC4L "Nucleolar complex prote 0.969 0.948 0.323 8.5e-65
FB|FBgn0029672497 CG2875 [Drosophila melanogaste 0.835 0.835 0.343 3.4e-61
ZFIN|ZDB-GENE-050522-98525 noc4l "nucleolar complex assoc 0.979 0.927 0.308 3.4e-61
UNIPROTKB|F1RFR4516 NOC4L "Uncharacterized protein 0.907 0.874 0.311 9.6e-57
UNIPROTKB|Q9BVI4516 NOC4L "Nucleolar complex prote 0.921 0.887 0.312 2e-56
UNIPROTKB|F1Q279516 NOC4L "Uncharacterized protein 0.897 0.864 0.322 5.3e-56
RGD|1310661516 Noc4l "nucleolar complex assoc 0.915 0.881 0.307 8.6e-56
MGI|MGI:2140843516 Noc4l "nucleolar complex assoc 0.917 0.883 0.306 3.7e-55
UNIPROTKB|F1MFW8411 NOC4L "Uncharacterized protein 0.706 0.854 0.312 6.7e-49
UNIPROTKB|F1P3D2 EP400 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 165/510 (32%), Positives = 274/510 (53%)

Query:     7 LKKKINEFLSNRKYSNNLIEILACLDDVNKVKPNTLLGIQ---RLFVELLKK---HAMSS 60
             L   +   L +R  +N + EIL  L    K + + L   +   RLF  +L++    A S 
Sbjct:    14 LAASLEAVLGDRGNANRVFEILELL--AAKEEEDVLCAARTCRRLFAAMLRRGELFAGSL 71

Query:    61 QTSEDQDKKIKAAEEKYKVWLRDCYKSLFPKLFDILFNGESEVQIQTFSTLMHLVQGEAK 120
                ED  +   +AEEKYK+W+R  Y      L ++L +   +V+  +  TLM  V+ EA+
Sbjct:    72 PAEEDALRGNYSAEEKYKIWMRHRYNDCVESLSELLGHDSFQVKESSLCTLMKFVELEAE 131

Query:   121 YPITLSK-----PFPEDKLQMLIKNILSSPFYP---VFVERFKEYLSFKDVIFYSFKSMS 172
              P+   +      FP   L++++  ++  P +    + + RF+EY+ ++DV ++  K+++
Sbjct:   132 CPLVAEQWKGSIAFPRHLLKVVVNGLI--PIHEDASLLISRFQEYMEYEDVRYFVMKAVT 189

Query:   173 TLLSENFVENEE----ILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCGNESLALN-IK 227
               + +   + +E    +  NV + I  I +PN +  +     K    L   E   ++ ++
Sbjct:   190 ESIGQVMQKIKELDPPVWQNVFSLISPINMPNKERDMVKFMMKQAFSLDNREEWKVSKLQ 249

Query:   228 DFCTFSSKIWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALSFKGPIA 287
                    ++W    K +   S   K +L++L D ++ Y + P ++ DFL  A    G I+
Sbjct:   250 AHKQAFERMWLTFLKHQ-LPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAIS 308

Query:   288 VLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLV 347
             +LAL G+  L+ Q+NLEYP+ Y KLY+LL+P+I++ KY+AR F+L DL + S+HLP  LV
Sbjct:   309 LLALNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLV 368

Query:   348 ASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATM-LEDDPFDAKQED 406
             A+FIKRLSRL LTAPP+ + ++I  I NL  RH    +L    +    L +DP+  +QE+
Sbjct:   369 AAFIKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSEDPYIMEQEE 428

Query:   407 PYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFK 466
             P  + AL+SSLWE++ LQNH    V   A  +N  L  +E D+   LE++  E+F+KE K
Sbjct:   429 PSESRALESSLWELQSLQNHYHPDVAQAAAILNQSLSEIEDDISGLLELSASELFDKEIK 488

Query:   467 KKQKNISTNFEKPSDMFQPTVTKLFDHFSL 496
             K   N+   FE+   +F      + +HF+L
Sbjct:   489 KTSANVPLEFEQVRGLFGKKNDIIAEHFAL 518




GO:0042254 "ribosome biogenesis" evidence=IEA
UNIPROTKB|Q5ZJC7 NOC4L "Nucleolar complex protein 4 homolog" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0029672 CG2875 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050522-98 noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RFR4 NOC4L "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BVI4 NOC4L "Nucleolar complex protein 4 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q279 NOC4L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1310661 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2140843 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1MFW8 NOC4L "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5I0I8NOC4L_RATNo assigned EC number0.30680.91750.8837yesN/A
Q4VBT2NOC4L_DANRENo assigned EC number0.30620.98390.9314yesN/A
Q5ZJC7NOC4L_CHICKNo assigned EC number0.32310.93760.9173yesN/A
Q8BHY2NOC4L_MOUSENo assigned EC number0.30760.91750.8837yesN/A
Q9BVI4NOC4L_HUMANNo assigned EC number0.30390.92150.8875yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query497
pfam03914151 pfam03914, CBF, CBF/Mak21 family 1e-43
>gnl|CDD|217788 pfam03914, CBF, CBF/Mak21 family Back     alignment and domain information
 Score =  150 bits (382), Expect = 1e-43
 Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 2/142 (1%)

Query: 286 IAVLALQGMVNLVRQYNLEYPNIYDKLYALLEPNIFYTKYKARLF-YLTDLLMMSTHLPE 344
            ++LAL  +  L+  +NL+    Y KLY LL   + ++ YK+RLF  L D  + S HLP 
Sbjct: 1   TSILALFLLFQLMSGHNLDLDRFYRKLYRLLLDKLLHSSYKSRLFLRLLDKALKSDHLPA 60

Query: 345 GLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATMLEDDPFDAKQ 404
             VA+F+KRL +L L APP     ++ LI NL+ RH  L  L    +    ED P+D ++
Sbjct: 61  QRVAAFVKRLLQLALHAPPSFALGILPLIRNLLKRHPNLKSLLHTEERG-GEDGPYDPEE 119

Query: 405 EDPYHTNALKSSLWEIKMLQNH 426
            DP ++NAL SSLWE+++LQNH
Sbjct: 120 RDPEYSNALNSSLWELELLQNH 141


Length = 151

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 497
KOG2154|consensus505 100.0
KOG2038|consensus 988 100.0
COG5117657 NOC3 Protein involved in the nuclear export of pre 100.0
KOG2153|consensus704 100.0
COG5593 821 Nucleic-acid-binding protein possibly involved in 100.0
PF03914164 CBF: CBF/Mak21 family; InterPro: IPR005612 This do 100.0
PF0754095 NOC3p: Nucleolar complex-associated protein; Inter 99.66
KOG2153|consensus704 97.86
PTZ00429 746 beta-adaptin; Provisional 90.64
>KOG2154|consensus Back     alignment and domain information
Probab=100.00  E-value=1.5e-86  Score=678.10  Aligned_cols=480  Identities=31%  Similarity=0.449  Sum_probs=424.6

Q ss_pred             chHHHHHHHHHHhhCccccccHHHHHHhhccCCC-cHHHHHHHHHHHHHHHhhcCCCCCCcchhhhhhhHHHHHHHHHHH
Q psy14430          3 GQINLKKKINEFLSNRKYSNNLIEILACLDDVNK-VKPNTLLGIQRLFVELLKKHAMSSQTSEDQDKKIKAAEEKYKVWL   81 (497)
Q Consensus         3 ~k~~i~~l~~~ile~~~n~n~l~~Ll~~~~~~~~-~~~~a~~sL~~vF~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~wL   81 (497)
                      ++..++...+.|+.+...+|+..++...++++.+ ..+.+..+++++|..++.+|.+..+    ..++.....++|..|+
T Consensus        16 ~~~~l~~~~nsll~s~~e~~~~~d~~~~l~~E~p~~~~~~~~~~~~~f~~ll~~gll~~P----s~~ks~~~~~~~k~w~   91 (505)
T KOG2154|consen   16 TKKALQSLLNSLLTSRSEINNLPDLLTFLEDETPKNFVVAVALSVQSFFKLLLRGLLPRP----SSTKSEDGEEKFKNWL   91 (505)
T ss_pred             HHHHHHhhhhhhhhHHHhhccchhhhhhhcccCchhHHHHHHHHHHHHHHHHHcCCCCCC----chhcccchHHHHHHHH
Confidence            3566778888899988899999999999887776 6778888999999999999987532    2223333448999999


Q ss_pred             HHHHHHHHHHHHHhhccCccc-hHHHHHHHHHHHHHhhcCCCCCCCCCCchHHHHHHHHHhhCCCCchhHHHHHHHhhhc
Q psy14430         82 RDCYKSLFPKLFDILFNGESE-VQIQTFSTLMHLVQGEAKYPITLSKPFPEDKLQMLIKNILSSPFYPVFVERFKEYLSF  160 (497)
Q Consensus        82 ~~~Y~~~~~~L~~~~~~~~~~-~~~~al~~~~~Ll~~e~~~~~~~~~~F~~~ll~~lV~~Ll~~~~~~~~i~~~~e~~~~  160 (497)
                      +.+|.+|+..|.+++.+.... .+..++...|+|.+.++.|...+...||+.+|+.++..|++++   .++..|.+...|
T Consensus        92 r~~y~e~~~kL~eils~~s~e~l~l~~l~~~~ql~~~e~l~~~~~~g~fp~~~f~~l~~~LisSd---v~it~f~e~~~~  168 (505)
T KOG2154|consen   92 RKKYEEFVKKLLEILSSQSFEDLGLSGLLLGTQLEKVESLHGIAENGGFPNSIFHRLLDALISSD---VDITIFLENVGY  168 (505)
T ss_pred             HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhhhcccccccccCCcHHHHHHHHHHHhccc---ccHHHHHHhccc
Confidence            999999999999999876533 4778888889999999998777667899999999999999993   467777666677


Q ss_pred             CChHHHHHHHHHHHh----hhcccchHHHHHHHHHHhcccCCCCCccccccchhhhhhhccc-ccchhcchHHHHhHHHH
Q psy14430        161 KDVIFYSFKSMSTLL----SENFVENEEILMNVLNFIKEIPIPNNKEKLFPAEAKSEEFLCG-NESLALNIKDFCTFSSK  235 (497)
Q Consensus       161 ~dv~~~~~~~l~~~l----~~~~~~~~~~~~n~l~lL~~l~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  235 (497)
                      .|.+|..+...-+.+    .+.....+....|.+.+++.+++|......       ..++.. .+++..+++++|+.|+.
T Consensus       169 t~k~f~~~~~~~~~~~s~~~q~~~Dp~v~~~N~~~~ls~v~~p~~~~S~-------~~~~~~~~p~~~~~~~~~~k~f~~  241 (505)
T KOG2154|consen  169 TDKYFKYFDITLTQVRSVVPQHPTDPPVIANNELEILSLVSLPLSVSST-------SSYVLEPIPKQTENEKQIRKSFQN  241 (505)
T ss_pred             hhHHHHHHHHHHHHHHHhccCCCCCCchhhcchHHHhhhccCCCCcccH-------hhhccccCccccccHHHHHHHHHH
Confidence            888888777543333    322233567778999999999988764311       223333 35666888899999999


Q ss_pred             HHHHHhccCCCChhHHHHHHHHhhhhhhccCCCchhhHHHHHHHhc-CChhHHHHHHHHHHHHHhhcCCCchhHHHHHHh
Q psy14430        236 IWEVLSKWKGHTSESTKLLLMVLIDKLMYYHSNPIVITDFLMNALS-FKGPIAVLALQGMVNLVRQYNLEYPNIYDKLYA  314 (497)
Q Consensus       236 ~w~~~l~~~~l~~~l~~~vL~~l~~~~~p~~~~p~~l~Dfl~~~~~-~~~~~sllaL~~lF~L~~~~nld~~~FY~~LY~  314 (497)
                      +|+++++.+ ++.++|++||.++++||+||+..|..++|||+|+|| .||.+|++||+|||.||++||++||+||.+||+
T Consensus       242 ~Wls~l~~~-ls~~lykkil~vih~rvip~l~~P~kl~DFLtdsyd~~~g~vslLALngLF~Lm~khNleYP~FY~KLY~  320 (505)
T KOG2154|consen  242 MWLSSLNGE-LSLKLYKKILLVIHKRVIPHLISPTKLMDFLTDSYDDIGGVVSLLALNGLFILMTKHNLEYPDFYEKLYA  320 (505)
T ss_pred             HHHHHhcCc-CcHHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHhccCCchhHHHHhHHHHHHHHcCCCCchHHHHHHH
Confidence            999999999 999999999999999999999999999999999998 899999999999999999999999999999999


Q ss_pred             hhCCCccccchhhhHHHHHHHHHhcCCCChHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHhcccccccccCcccCC
Q psy14430        315 LLEPNIFYTKYKARLFYLTDLLMMSTHLPEGLVASFIKRLSRLCLTAPPQDIAIMIYLIGNLVLRHKGLTILFQNSDATM  394 (497)
Q Consensus       315 lL~p~~~~~~~r~~~l~L~dlflss~~~~~~rvaAFiKRL~~lsL~~pp~~~~~~L~li~~Ll~~~p~l~~Ll~~~~~~~  394 (497)
                      |++|+++|.+||+|||||+|+|++|+|+|++.||||+|||+|+||.+||.+++.+++||+||++|||+|+.|+|++...+
T Consensus       321 Ll~Pslfh~KyRarff~L~D~FLSSTHLpa~LvAsFlKrLaRlaL~APpeA~~~vipfI~Nll~rHp~c~~lvhr~~~~~  400 (505)
T KOG2154|consen  321 LLNPSLFHVKYRARFFRLADLFLSSTHLPAYLVASFLKRLARLALEAPPEAIVIVIPFICNLLRRHPNCQPLVHRSHALS  400 (505)
T ss_pred             hcCchHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHhCCchhhhhccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998766


Q ss_pred             CCCCCCCCCCCCCCCCCCCccchhhHHHhccCCChhHHHHHHHhhCCCCCCccCcccccCCCHHHHHHHHHhccCC-CCc
Q psy14430        395 LEDDPFDAKQEDPYHTNALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQK-NIS  473 (497)
Q Consensus       395 ~~~~~y~~~~~dP~~snA~~s~LWEL~~L~~HyhP~V~~~A~~l~~~~~~~~~~~~~~ld~~~~~~~~~e~~~~~k-~~~  473 (497)
                      ..+||||+++.||..|+|++||||||.+||.||||+|+..|+.+.+++++++|+++|++|++|..++|.|++++.| .+|
T Consensus       401 ~~~Dpfd~~EtDP~ks~ALeSSLWEL~~Lq~Hy~p~Va~~A~~~~q~~~k~ef~~ed~ld~~y~~l~d~el~~kgk~~p~  480 (505)
T KOG2154|consen  401 LYDDPFDNDETDPKKSGALESSLWELELLQTHYHPEVAKAASFFNQSLYKPEFGLEDGLDSKYSVLQDGELSRKGKRFPP  480 (505)
T ss_pred             CCCCCCCCCCCChhhhhhHHHHHHHHHHHHHhhcHHHHHHHHHHhccCccccccCcchhhhhhHHhhcchhhcccCCCCC
Confidence            6779999999999999999999999999999999999999999999999999999999999999999999999998 577


Q ss_pred             ccccCCCCCCCCCccccccccccC
Q psy14430        474 TNFEKPSDMFQPTVTKLFDHFSLV  497 (497)
Q Consensus       474 l~~~~~~~~~~~~~~~~~~~w~~~  497 (497)
                      ++|+++++++++.++..+++|+++
T Consensus       481 lefe~~t~~~g~~~e~~s~~~~li  504 (505)
T KOG2154|consen  481 LEFERRTGLGGRFHELSSKSNVLI  504 (505)
T ss_pred             cccccccccCCchhhHHHhhhccC
Confidence            999999999999999999999875



>KOG2038|consensus Back     alignment and domain information
>COG5117 NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG2153|consensus Back     alignment and domain information
>COG5593 Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF03914 CBF: CBF/Mak21 family; InterPro: IPR005612 This domain is present in the CAATT-binding protein which is essential for growth and necessary for 60S ribosomal subunit biogenesis Back     alignment and domain information
>PF07540 NOC3p: Nucleolar complex-associated protein; InterPro: IPR011501 Nucleolar complex-associated protein (Noc3p, Q07896 from SWISSPROT) is conserved in eukaryotes and plays essential roles in replication and rRNA processing in Saccharomyces cerevisiae [] Back     alignment and domain information
>KOG2153|consensus Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query497
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 59.9 bits (144), Expect = 1e-09
 Identities = 75/445 (16%), Positives = 134/445 (30%), Gaps = 150/445 (33%)

Query: 129 FPEDKLQMLIKNILSSPFYPVFVERFKEYLSFKDVIFYSFKSMSTLLSENFVENEEILMN 188
           F   + Q   K+IL      VF + F +    KDV         ++LS+   E + I+M+
Sbjct: 9   FETGEHQYQYKDIL-----SVFEDAFVDNFDCKDVQ----DMPKSILSKE--EIDHIIMS 57

Query: 189 VLNFIKEIPIPNNKEK---LF-----PAEAKSEEFLCGNESLALNIKDFCTFSSKIWEVL 240
                      +       LF       E   ++F+   E L +N K         + ++
Sbjct: 58  ----------KDAVSGTLRLFWTLLSKQEEMVQKFV--EEVLRINYK---------F-LM 95

Query: 241 SKWKGHTSESTKLLLMVL--IDKLMYYHSNPIVITDF---------LMNALSFKGPIAVL 289
           S  K    + + +  M +   D+L  Y+ N +              L  AL    P   +
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRL--YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153

Query: 290 ALQGM---------VNLVRQYNLE--YPN-IY-----------------DKLYALLEPNI 320
            + G+         +++   Y ++      I+                  KL   ++PN 
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 321 -----FYTKYKARLFYLTD---LLMMSTHLPEGLV-------ASFIKRLSRLC---LTAP 362
                  +  K R+  +      L+ S      L+       A      +  C   LT  
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT- 272

Query: 363 PQDIAIMIYLIGN------LVLRHKGLTI-----LFQNSDATMLEDDPFDAKQEDPYHTN 411
            +   +  +L         L      LT      L        L+  P D  +E      
Sbjct: 273 -RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL----LKYLDCRPQDLPRE------ 321

Query: 412 ALKSSLWEIKMLQNHPLYTVNVPARFINNPLPNVEWDLGNYLEVNYDEIFNKEFKKKQKN 471
                     +L  +P     +     +       WD  N+  VN D+      +     
Sbjct: 322 ----------VLTTNPRRLSIIAESIRDGLA---TWD--NWKHVNCDK-LTTIIES---- 361

Query: 472 ISTNFEKPSDMFQPTVTKLFDHFSL 496
            S N  +P++       K+FD  S+
Sbjct: 362 -SLNVLEPAEY-----RKMFDRLSV 380


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00