Psyllid ID: psy14454

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------
Protein Sequence
MSKLLKNENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDAKHGRL
Secondary Structure (PSIPRED)
cHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcHHHHHcHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mskllknennsERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQMAKLSADDredllqdpkkdkELTSLIMDmdakhgrl
Flexible Loop (DISEMBL)
mskllknennsereslEQELSNAKLLIERLERTQRQEAARsqaelgsykqrlDRADADLLHSRKENIRLTEQIANIEKELQMAKLsaddredllqdpkkdkeltslimdmdakhgrl
Low Complexity Region (SEG)
MSKLLKNENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDAKHGRL
Disordered region (IsUnstruct)
*********************************************************************************************************************
Disordered Region (DISOPRED)
***************************************************LDRADADLLHSRKENIRLTEQIANIEKEL*************************************
Disordered Region (DISEMBL)
*******************LSNAKLLIERLER*************GSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDAKHGRL
Disordered Region (DISPRO)
*S*****ENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQMAKLSA*DREDLLQDPKK*KELTSLIMDMDA*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSKLLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxADDREDLLQDPKKDKELTSLIMDMDAKHGRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	117
307177319	841	Serologically defined colon cancer antig	0.914	0.127	0.541	2e-23
307207513	810	Serologically defined colon cancer antig	0.914	0.132	0.522	8e-23
332024994	817	Serologically defined colon cancer antig	0.897	0.128	0.532	4e-22
345481072	838	PREDICTED: hypothetical protein LOC10012	0.948	0.132	0.487	2e-18
170064731	704	mrp4 [Culex quinquefasciatus] gi|1678820	0.854	0.142	0.444	3e-17
157135036	535	mrp4, putative [Aedes aegypti] gi|108870	0.854	0.186	0.444	6e-17
357627437	830	hypothetical protein KGM_05287 [Danaus p	0.880	0.124	0.457	4e-16
270003416	858	hypothetical protein TcasGA2_TC002645 [T	0.914	0.124	0.395	1e-15
189235681	850	PREDICTED: similar to mrp4 [Tribolium ca	0.914	0.125	0.395	1e-15
390178732	1057	GA26381, isoform D [Drosophila pseudoobs	0.846	0.093	0.471	2e-14

>gi|307177319|gb|EFN66492.1| Serologically defined colon cancer antigen 8-like protein [Camponotus floridanus]

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 82/109 (75%), Gaps = 2/109 (1%)

Query: 11  SERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLT 70
           SE+++ EQEL  +KL  ER ER  RQE +R QAE+ SYKQRL+R DADL+H R+EN+RL 
Sbjct: 497 SEKDAAEQELLTSKLTTERNERQARQEQSRLQAEINSYKQRLERGDADLVHCRRENLRLA 556

Query: 71  EQIANIEKELQMAKL--SADDREDLLQDPKKDKELTSLIMDMDAKHGRL 117
           EQIA++EKE+ M K+    D+R+++    + +KELTS+IMDM+ KHG +
Sbjct: 557 EQIASLEKEINMNKIVRPEDNRKEITPRLENEKELTSMIMDMETKHGNV 605

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207513|gb|EFN85216.1| Serologically defined colon cancer antigen 8 [Harpegnathos saltator]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 82/109 (75%), Gaps = 2/109 (1%)

Query: 11  SERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLT 70
           SE+++ EQE+   KL  ER ER  RQE +R Q E+ SYKQRL+RADADL+H R+EN+RL+
Sbjct: 496 SEKDAAEQEVLTGKLAAERNERQARQEQSRLQTEINSYKQRLERADADLVHCRRENLRLS 555

Query: 71  EQIANIEKELQMAKLSA--DDREDLLQDPKKDKELTSLIMDMDAKHGRL 117
           EQIA++EKE+ ++K++   D R  +    + +KELTS+IMDM+ KHG++
Sbjct: 556 EQIASLEKEISVSKIAHPEDSRSQVTPRLENEKELTSMIMDMETKHGKM 604

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024994|gb|EGI65181.1| Serologically defined colon cancer antigen 8-like protein [Acromyrmex echinatior]

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 81/107 (75%), Gaps = 2/107 (1%)

Query: 11  SERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLT 70
           SE+++ EQE+   KL  ER +R  RQE  R QAE+ SYKQRL+RADADL+H R+EN+RL+
Sbjct: 496 SEKDAAEQEVLTGKLATERNDRQARQEQNRLQAEINSYKQRLERADADLVHCRRENLRLS 555

Query: 71  EQIANIEKELQMAKL--SADDREDLLQDPKKDKELTSLIMDMDAKHG 115
           EQIA++EKE+ M+K+  S ++R ++    + +KELTS+IMDM+ KH 
Sbjct: 556 EQIASLEKEISMSKIIRSEENRSEITPRLENEKELTSMIMDMETKHA 602

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481072|ref|XP_001605105.2| PREDICTED: hypothetical protein LOC100121494 [Nasonia vitripennis]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/117 (48%), Positives = 83/117 (70%), Gaps = 6/117 (5%)

Query: 7   NENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKEN 66
           NE  +E+++ ++E++  KL  ER ER  RQE +R Q+E+ SYK RL+RADADL+H+R+EN
Sbjct: 502 NEALAEKDASQEEVATVKLASERNERQARQEQSRLQSEISSYKMRLERADADLVHARREN 561

Query: 67  IRLTEQIANIEKELQMAKLSADDR---EDLLQD-PK--KDKELTSLIMDMDAKHGRL 117
           +RLTE+I+ +EKE+ M++L  + R     +  D PK  KDKEL SLI D++ K G L
Sbjct: 562 LRLTEEISALEKEINMSRLVEETRVGSHPVKPDRPKDDKDKELASLIFDLENKQGEL 618

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170064731|ref|XP_001867647.1| mrp4 [Culex quinquefasciatus] gi|167882020|gb|EDS45403.1| mrp4 [Culex quinquefasciatus]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 79/108 (73%), Gaps = 8/108 (7%)

Query: 7   NENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKEN 66
           N+ ++E++SLEQE+++ +L +ER ER  + E +R  AE+ S +QRLDR+DADLLHS++EN
Sbjct: 472 NQASAEKQSLEQEITSLRLQLERAERQSKVEVSRLNAEITSLRQRLDRSDADLLHSKREN 531

Query: 67  IRLTEQIANIEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDAKH 114
           ++L++++A++EKEL + +L+ + R          KEL  +I DM+AKH
Sbjct: 532 LKLSDEVASLEKELTLGELNKETR--------PSKELAKIISDMEAKH 571

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157135036|ref|XP_001663401.1| mrp4, putative [Aedes aegypti] gi|108870307|gb|EAT34532.1| AAEL013234-PA, partial [Aedes aegypti]

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 79/108 (73%), Gaps = 8/108 (7%)

Query: 7   NENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKEN 66
           N+ ++E++SLEQE+++ +L +ER ER  + E +R  AE+ S +QRLDR+DADLLHS++EN
Sbjct: 427 NQASAEKQSLEQEITSLRLQLERSERQSKVEVSRLNAEITSLRQRLDRSDADLLHSKREN 486

Query: 67  IRLTEQIANIEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDAKH 114
           ++L++++A++EKEL + +L+ + R          KEL  +I DM+AKH
Sbjct: 487 LKLSDEVASLEKELTLGELNKETR--------PSKELAKIISDMEAKH 526

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357627437|gb|EHJ77125.1| hypothetical protein KGM_05287 [Danaus plexippus]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 76/107 (71%), Gaps = 4/107 (3%)

Query: 10  NSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRL 69
           ++E+ SLE+EL++A+L IER +R  + E  R  +E+ S +QRLDRADADL+HSR+EN+RL
Sbjct: 464 HAEKASLEEELASARLAIERHQRQAKHETNRLNSEIQSVRQRLDRADADLVHSRRENLRL 523

Query: 70  TEQIANIEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDAKHGR 116
           +EQI+ +E+EL +  L+    E       K+KEL+S++  M+ KH +
Sbjct: 524 SEQISTLERELNLKNLTPISPE----KKGKEKELSSMLETMENKHAK 566

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003416|gb|EEZ99863.1| hypothetical protein TcasGA2_TC002645 [Tribolium castaneum]

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 37/144 (25%)

Query: 9   NNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIR 68
           N +E+ +LEQ+++  ++  ER ER  +QE  R QAE+ S +QRLDRADADL+HSR+ENIR
Sbjct: 414 NGAEKSALEQQIATLQMTNERNERQSKQEIGRLQAEMQSLRQRLDRADADLIHSRRENIR 473

Query: 69  LTEQIANIEKE----LQMAKLSADDREDL------------------------------- 93
           LTEQ+A++EKE      +A L+  +   L                               
Sbjct: 474 LTEQVASLEKENLENKSIASLATPEAAPLGKGLLRLYLVSIKLNSALSEEKSKQSSGEVL 533

Query: 94  -LQDPK-KDKELTSLIMDMDAKHG 115
            L  PK +DK+L+SLI DM++KH 
Sbjct: 534 ALPPPKEQDKQLSSLIQDMESKHA 557

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235681|ref|XP_971571.2| PREDICTED: similar to mrp4 [Tribolium castaneum]

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 37/144 (25%)

Query: 9   NNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIR 68
           N +E+ +LEQ+++  ++  ER ER  +QE  R QAE+ S +QRLDRADADL+HSR+ENIR
Sbjct: 408 NGAEKSALEQQIATLQMTNERNERQSKQEIGRLQAEMQSLRQRLDRADADLIHSRRENIR 467

Query: 69  LTEQIANIEKE----LQMAKLSADDREDL------------------------------- 93
           LTEQ+A++EKE      +A L+  +   L                               
Sbjct: 468 LTEQVASLEKENLENKSIASLATPEAAPLGKGLLRLYLVSIKLNSALSEEKSKQSSGEVL 527

Query: 94  -LQDPK-KDKELTSLIMDMDAKHG 115
            L  PK +DK+L+SLI DM++KH 
Sbjct: 528 ALPPPKEQDKQLSSLIQDMESKHA 551

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390178732|ref|XP_003736716.1| GA26381, isoform D [Drosophila pseudoobscura pseudoobscura] gi|388859569|gb|EIM52789.1| GA26381, isoform D [Drosophila pseudoobscura pseudoobscura]

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 73/106 (68%), Gaps = 7/106 (6%)

Query: 9   NNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIR 68
           +N+E++SLEQE+++ +L ++R  R  + EAAR QAE+ S +QRLDR DADLLHS++E +R
Sbjct: 468 SNAEKQSLEQEITSLRLQLDRAARETKTEAARLQAEINSLRQRLDRGDADLLHSKREVLR 527

Query: 69  LTEQIANIEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDAKH 114
           L ++IAN+EKEL   +L  + R      P K K+L   I +M  KH
Sbjct: 528 LNDEIANLEKELAYGELKNEIR------PTK-KDLDKRISEMQDKH 566

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	117
UNIPROTKB|E1BKZ3	728	SDCCAG8 "Uncharacterized prote	0.940	0.151	0.260	5e-06
UNIPROTKB|A6NCS9	568	SDCCAG8 "Serologically defined	0.940	0.193	0.260	1.6e-05
UNIPROTKB|Q86SQ7	713	SDCCAG8 "Serologically defined	0.940	0.154	0.260	2.1e-05
WB|WBGene00003777	2003	nmy-2 [Caenorhabditis elegans	0.854	0.049	0.315	2.2e-05
UNIPROTKB|F1NQI6	650	SDCCAG8 "Uncharacterized prote	0.914	0.164	0.268	2.4e-05
UNIPROTKB|Q87X31	289	PSPTO_4359 "Conserved domain p	0.888	0.359	0.281	5.2e-05
MGI|MGI:1924066	717	Sdccag8 "serologically defined	0.940	0.153	0.226	9.5e-05
ZFIN|ZDB-GENE-090313-318	701	sdccag8 "serologically defined	0.957	0.159	0.239	0.00015
MGI|MGI:1933549	845	Slmap "sarcolemma associated p	0.914	0.126	0.306	0.00019
UNIPROTKB|C9JPE6	296	SLMAP "Sarcolemmal membrane-as	0.905	0.358	0.287	0.00019

UNIPROTKB|E1BKZ3 SDCCAG8 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 117 (46.2 bits), Expect = 5.0e-06, P = 5.0e-06
 Identities = 31/119 (26%), Positives = 57/119 (47%)

Query:     7 NENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKEN 66
             N+   E++  E+E    +   +R    + QE  +   EL   KQRL++       +R+E 
Sbjct:   464 NKTKMEKDEAEKEHREYRTKTKRDLEIKDQEIEKLSLELSESKQRLEQQQEKATRAREEC 523

Query:    67 IRLTEQIANIEKELQMAKLSADD---------REDLLQDPKKDKELTSLIMDMDAKHGR 116
             ++LTE +   E +L + +L  D          +   LQ  ++++ELT  I  M+A+H +
Sbjct:   524 LKLTELLGESEHQLHLTRLEKDSIQQSFSNEAKAQALQAQQREQELTQKIQQMEAQHDK 582

GO:0035148 "tube formation" evidence=IEA

GO:0030010 "establishment of cell polarity" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005814 "centriole" evidence=IEA

UNIPROTKB|A6NCS9 SDCCAG8 "Serologically defined colon cancer antigen 8" [Homo sapiens (taxid:9606)]

 Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 31/119 (26%), Positives = 56/119 (47%)

Query:     7 NENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKEN 66
             N+ N E++  E+E    +    R    + QE  + + EL   KQ L++       +R+E 
Sbjct:   317 NKTNMEKDEAEKEHREFRAKTNRDLEIKDQEIEKLRIELDESKQHLEQEQQKAALAREEC 376

Query:    67 IRLTEQIANIEKELQMAKLSADD---------REDLLQDPKKDKELTSLIMDMDAKHGR 116
             +RLTE +   E +L + +   D          +   LQ  ++++ELT  I  M+A+H +
Sbjct:   377 LRLTELLGESEHQLHLTRQEKDSIQQSFSKEAKAQALQAQQREQELTQKIQQMEAQHDK 435

GO:0005813 "centrosome" evidence=IEA

GO:0030010 "establishment of cell polarity" evidence=IEA

GO:0035148 "tube formation" evidence=IEA

UNIPROTKB|Q86SQ7 SDCCAG8 "Serologically defined colon cancer antigen 8" [Homo sapiens (taxid:9606)]

 Score = 111 (44.1 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 31/119 (26%), Positives = 56/119 (47%)

Query:     7 NENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKEN 66
             N+ N E++  E+E    +    R    + QE  + + EL   KQ L++       +R+E 
Sbjct:   462 NKTNMEKDEAEKEHREFRAKTNRDLEIKDQEIEKLRIELDESKQHLEQEQQKAALAREEC 521

Query:    67 IRLTEQIANIEKELQMAKLSADD---------REDLLQDPKKDKELTSLIMDMDAKHGR 116
             +RLTE +   E +L + +   D          +   LQ  ++++ELT  I  M+A+H +
Sbjct:   522 LRLTELLGESEHQLHLTRQEKDSIQQSFSKEAKAQALQAQQREQELTQKIQQMEAQHDK 580

GO:0005515 "protein binding" evidence=IPI

GO:0005814 "centriole" evidence=IDA

GO:0005911 "cell-cell junction" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0035148 "tube formation" evidence=ISS

GO:0030010 "establishment of cell polarity" evidence=ISS

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

WB|WBGene00003777 nmy-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 110 (43.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
 Identities = 36/114 (31%), Positives = 64/114 (56%)

Query:     7 NENNSERESLEQELSNAKL-LIERLERTQRQEAARSQAE---------LGSYKQRLDRA- 55
             +E  + R+ LE+E+   +  L + +E T +++AAR +AE         L SYKQ L+ + 
Sbjct:  1110 DEELAARQQLEREIREIRAQLDDAIEETNKEKAARQKAEKARRDMAEELESYKQELEESN 1169

Query:    56 DADLLHSRKENIRLTEQIANIEKELQMAKLSADD--REDLLQDPKKDKELTSLI 107
             D  +LHS+ +  R  E+ A+++K+L+    S+++   E   Q+ KK +EL   I
Sbjct:  1170 DKTVLHSQLKAKR-DEEYAHLQKQLEETVKSSEEVVEEMKAQNQKKIEELNETI 1222

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IGI;IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0007413 "axonal fasciculation" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0009949 "polarity specification of anterior/posterior axis" evidence=IMP

GO:0016476 "regulation of embryonic cell shape" evidence=IGI

GO:0016460 "myosin II complex" evidence=ISS

GO:0005819 "spindle" evidence=IDA

GO:0005938 "cell cortex" evidence=IDA

GO:0032154 "cleavage furrow" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IPI

UNIPROTKB|F1NQI6 SDCCAG8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 32/119 (26%), Positives = 63/119 (52%)

Query:     7 NENNSERESLEQELSNAKL-LIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKE 65
             N+   +++  E+EL   +   I +LE  + Q+  +   EL   KQRL++A  D+  +R++
Sbjct:   449 NQTKMKKDEAEKELREYRTKTIRQLE-IKDQKIEKLGLELNGNKQRLEQAQQDVAGARED 507

Query:    66 NIRLTEQIAN----------IEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDAKH 114
              ++LTE ++           +EKE     +S + +   LQ  ++++ELT  +  M+A+H
Sbjct:   508 CLKLTELLSKSEHQLHLTSRLEKESIQRSISNEAKARALQAQQREQELTQKMQQMEAQH 566

GO:0005814 "centriole" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0030010 "establishment of cell polarity" evidence=IEA

GO:0035148 "tube formation" evidence=IEA

UNIPROTKB|Q87X31 PSPTO_4359 "Conserved domain protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 102 (41.0 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 31/110 (28%), Positives = 58/110 (52%)

Query:     3 KLLKNEN-NSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLH 61
             K++ NE+ +S+ E+L+Q +   KLL  +LE   +Q     + + GS  +RL++  A    
Sbjct:   113 KVVANESLSSDGEALKQRI---KLLEAQLEDQDKQREG-FEGQQGSLDKRLEQMAAQTAQ 168

Query:    62 SRKENIRLTEQIANIEKELQMAKLSADDREDLLQDPKK-DKELTSLIMDM 110
              + EN +L EQ+ ++  +L   K +  D +    D  K D ++ S+  D+
Sbjct:   169 QQSENAQLQEQLKSVVADLATLKAALPDVKSAQADQGKLDAQIKSVAADV 218

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:1924066 Sdccag8 "serologically defined colon cancer antigen 8" [Mus musculus (taxid:10090)]

 Score = 105 (42.0 bits), Expect = 9.5e-05, P = 9.5e-05
 Identities = 27/119 (22%), Positives = 57/119 (47%)

Query:     7 NENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKEN 66
             N+   E++ +E+E    K    +    + QE  + + EL   +Q +++       +R+E 
Sbjct:   466 NKTKMEKDEVEKEHREYKAKSHKDLEMKVQEIEKLRLELSESEQHVEQEQQKAARARQEC 525

Query:    67 IRLTEQIANIEKELQMAKLSADD---------REDLLQDPKKDKELTSLIMDMDAKHGR 116
             +R+TE +   E++L + +L  D          +   LQ  ++++ELT  I  M+ +H +
Sbjct:   526 LRVTELLGEAERQLHLTRLEKDSIQQSFSNEAKAQALQAQQREQELTQKIQQMETQHDK 584

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=ISO;IDA

GO:0005814 "centriole" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005911 "cell-cell junction" evidence=ISO

GO:0030010 "establishment of cell polarity" evidence=IMP

GO:0030054 "cell junction" evidence=IEA

GO:0035148 "tube formation" evidence=IMP

ZFIN|ZDB-GENE-090313-318 sdccag8 "serologically defined colon cancer antigen 8" [Danio rerio (taxid:7955)]

 Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
 Identities = 29/121 (23%), Positives = 59/121 (48%)

Query:     3 KLLKNENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHS 62
             + L ++   ++E  E+++ +    + R      QE  +   EL  Y+QRL+ A      +
Sbjct:   443 RFLLSQAQLKKEEAERDVRDISSKLGRQLELAEQEVQKLGVELSGYRQRLEEAQRAEGRA 502

Query:    63 RKENIRLTEQIANIEKELQMAKLS--ADDR---EDL----LQDPKKDKELTSLIMDMDAK 113
             R E   L E ++  +++L + +    A +R   ED+     Q  ++++ELT  +  M+A+
Sbjct:   503 RAEAAGLAEGLSRAQRQLHLTRQEKEASERCCGEDMAALTFQAQRRERELTQTLQQMEAQ 562

Query:   114 H 114
             H
Sbjct:   563 H 563

GO:0030054 "cell junction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0009790 "embryo development" evidence=IMP

GO:0005814 "centriole" evidence=IEA

MGI|MGI:1933549 Slmap "sarcolemma associated protein" [Mus musculus (taxid:10090)]

 Score = 103 (41.3 bits), Expect = 0.00019, P = 0.00019
 Identities = 34/111 (30%), Positives = 55/111 (49%)

Query:     7 NENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKEN 66
             +E  +E  SL+   S+ +L  ++ E  QR+EA R Q EL   K+  D  + +    +KEN
Sbjct:   641 SEYENEIRSLQ---SSFQLRCQQCEDQQREEATRLQGELEKLKKEWDVLETECHSLKKEN 697

Query:    67 IRLTEQIANIEKELQMA-KLSADDREDLLQDPKKDKELTSLIMDMDAKHGR 116
             + L+ ++   EKEL  + K S +   DL       KEL   +  +  +H R
Sbjct:   698 VLLSSELQRQEKELHNSQKQSFELTSDLSILQMTRKELEKQVGSLKEQHLR 748

GO:0005515 "protein binding" evidence=IPI

GO:0005615 "extracellular space" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IDA

UNIPROTKB|C9JPE6 SLMAP "Sarcolemmal membrane-associated protein" [Homo sapiens (taxid:9606)]

 Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
 Identities = 31/108 (28%), Positives = 53/108 (49%)

Query:    11 SERESLEQELSNA-KLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRL 69
             SE E     L N+ +L  ++ E  QR+EA R Q EL   ++  +  + +    ++EN+ L
Sbjct:    92 SEYEKEITSLQNSFQLRCQQCEDQQREEATRLQGELEKLRKEWNALETECHSLKRENVLL 151

Query:    70 TEQIANIEKELQMA-KLSADDREDLLQDPKKDKELTSLIMDMDAKHGR 116
             + ++   EKEL  + K S +   DL       KEL + +  +  +H R
Sbjct:   152 SSELQRQEKELHNSQKQSLELTSDLSILQMSRKELENQVGSLKEQHLR 199

GO:0006457 "protein folding" evidence=IEA

GO:0016272 "prefoldin complex" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	117
PRK10929	1109	PRK10929, PRK10929, putative mechanosensitive chan	4e-04

>gnl|CDD|236798 PRK10929, PRK10929, putative mechanosensitive channel protein; Provisional

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 8   ENNSERESLEQELSNAKLLIERLERTQ-----RQEAARSQAELGSYKQRLDRADADL--L 60
              ++  +L+ E +  K L++ LE  Q     RQE AR ++EL   K+R  + DA L  L
Sbjct: 170 LAQAQLTALQAESAALKALVDELELAQLSANNRQELARLRSEL--AKKRSQQLDAYLQAL 227

Query: 61  HSRKENIRLTEQIANIEKELQMAKLSADDREDLLQDPKKDKELT 104
            ++  + R  E    +E    +A+ S D  + ++   K ++EL+
Sbjct: 228 RNQLNSQRQREAERALESTELLAEQSGDLPKSIVAQFKINRELS 271

Length = 1109

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	117
PRK11637	428	AmiB activator; Provisional	90.96
PF10473	140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	86.83
PF08317	325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	85.72
PF00038	312	Filament: Intermediate filament protein; InterPro:	84.71
PRK10884	206	SH3 domain-containing protein; Provisional	80.8
PRK10884	206	SH3 domain-containing protein; Provisional	80.11

>PRK11637 AmiB activator; Provisional

Probab=90.96  E-value=3.9  Score=34.49  Aligned_cols=73  Identities=14%  Similarity=0.242  Sum_probs=41.0

Q ss_pred             hhhhhhhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHHHHHh
Q psy14454          9 NNSERESLEQELSNAKLLIE---RLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQ   81 (117)
Q Consensus         9 a~~eKdeaE~El~~~r~k~~---R~~e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E~qLh   81 (117)
                      .+.+.+++++++......+.   ........+++.+..+|....+.+...++++.....+.-.+..+|..++.++.
T Consensus        45 ~~~~l~~l~~qi~~~~~~i~~~~~~~~~~~~~l~~l~~qi~~~~~~i~~~~~~i~~~~~ei~~l~~eI~~~q~~l~  120 (428)
T PRK11637         45 NRDQLKSIQQDIAAKEKSVRQQQQQRASLLAQLKKQEEAISQASRKLRETQNTLNQLNKQIDELNASIAKLEQQQA  120 (428)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455555555555544443   45555555666666666666666666655555555555555555555555543

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]

Probab=86.83  E-value=12  Score=28.49  Aligned_cols=58  Identities=16%  Similarity=0.207  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHHHHHh
Q psy14454         24 KLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQ   81 (117)
Q Consensus        24 r~k~~R~~e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E~qLh   81 (117)
                      +....++.+-++-||+.|..+|+.....+.+-..++...|.|.--|+-.+......+.
T Consensus        40 ~e~~~~daEn~k~eie~L~~el~~lt~el~~L~~EL~~l~sEk~~L~k~lq~~q~kv~   97 (140)
T PF10473_consen   40 KECLILDAENSKAEIETLEEELEELTSELNQLELELDTLRSEKENLDKELQKKQEKVS   97 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4457888999999999999999999999999999999999999999877776655543

There are several leucine-rich repeats along the sequence of LEK1 that are considered to be zippers, though they do not appear to be binding DNA directly in this instance []. ; GO: 0008134 transcription factor binding, 0042803 protein homodimerization activity, 0045502 dynein binding

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []

Probab=85.72  E-value=16  Score=30.21  Aligned_cols=77  Identities=27%  Similarity=0.311  Sum_probs=47.1

Q ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHH
Q psy14454          5 LKNENNSERESLEQELSNAKLLIER-------LERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIE   77 (117)
Q Consensus         5 ~l~Qa~~eKdeaE~El~~~r~k~~R-------~~e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E   77 (117)
                      ++......+++++.++..++....-       .++..++++..+..+|...|+.|+..+..+.....+.=.+++++..+.
T Consensus       178 ~~~~l~~~~~~L~~e~~~Lk~~~~e~~~~D~~eL~~lr~eL~~~~~~i~~~k~~l~el~~el~~l~~~i~~~~~~k~~l~  257 (325)
T PF08317_consen  178 LLPKLRERKAELEEELENLKQLVEEIESCDQEELEALRQELAEQKEEIEAKKKELAELQEELEELEEKIEELEEQKQELL  257 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455666778888888888776542       344555666666666666666666666666666655555555555555


Q ss_pred             HHHh
Q psy14454         78 KELQ   81 (117)
Q Consensus        78 ~qLh   81 (117)
                      .++.
T Consensus       258 ~eI~  261 (325)
T PF08317_consen  258 AEIA  261 (325)
T ss_pred             HHHH
Confidence            4443

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope

Probab=84.71  E-value=18  Score=28.68  Aligned_cols=74  Identities=20%  Similarity=0.287  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHHHHHhhhhCChhhhhhhhcCchhhHHHHHHHHHHHh
Q psy14454         34 QRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQMAKLSADDREDLLQDPKKDKELTSLIMDMDA  112 (117)
Q Consensus        34 ~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E~qLhl~~~s~e~~~~~lqa~~rekELt~~iqqMEa  112 (117)
                      ...++..+..|+..+|-.+...+.++...+..+-.|-.+|..+++.+... ...    .--.-...|.+|..+-.+|..
T Consensus       207 ~~~~~~~~~~E~~~~r~~~~~l~~el~~l~~~~~~Le~~l~~le~~~~~~-~~~----~~~~i~~le~el~~l~~~~~~  280 (312)
T PF00038_consen  207 SSEELESAKEELKELRRQIQSLQAELESLRAKNASLERQLRELEQRLDEE-REE----YQAEIAELEEELAELREEMAR  280 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhHhHHHHHHhhhhHhhhhhhccccchhhhhhhHHHHHHHHHHH-HHH----HHHhhhccchhHHHHHHHHHH
Confidence            45556777778888888888888888888888888888888888877762 111    111122345566655555543

They generally form filamentous structures 8 to 14 nm wide. IF proteins are members of a very large multigene family of proteins which has been subdivided in five major subgroups: Type I: Acidic cytokeratins. Type II: Basic cytokeratins. Type III: Vimentin, desmin, glial fibrillary acidic protein (GFAP), peripherin, and plasticin. Type IV: Neurofilaments L, H and M, alpha-internexin and nestin. Type V: Nuclear lamins A, B1, B2 and C. All IF proteins are structurally similar in that they consist of: a central rod domain comprising some 300 to 350 residues which is arranged in coiled-coiled alpha-helices, with at least two short characteristic interruptions; a N-terminal non-helical domain (head) of variable length; and a C-terminal domain (tail) which is also non-helical, and which shows extreme length variation between different IF proteins. While IF proteins are evolutionary and structurally related, they have limited sequence homologies except in several regions of the rod domain. This entry represents the central rod domain found in IF proteins.; PDB: 3TNU_B 3KLT_D 1GK4_F 3TRT_A 3G1E_A 3UF1_C 1GK6_B 1GK7_A 3TYY_B 3V4W_A ....

>PRK10884 SH3 domain-containing protein; Provisional

Probab=80.80  E-value=22  Score=28.31  Aligned_cols=13  Identities=15%  Similarity=0.220  Sum_probs=5.6

Q ss_pred             hHHHHHHHHHHHH
Q psy14454         15 SLEQELSNAKLLI   27 (117)
Q Consensus        15 eaE~El~~~r~k~   27 (117)
                      .+|+++.+++.+.
T Consensus        97 ~le~el~~l~~~l  109 (206)
T PRK10884         97 DLENQVKTLTDKL  109 (206)
T ss_pred             HHHHHHHHHHHHH
Confidence            3444444444333

>PRK10884 SH3 domain-containing protein; Provisional

Probab=80.11  E-value=28  Score=27.67  Aligned_cols=77  Identities=14%  Similarity=0.199  Sum_probs=36.7

Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHHHHHhh
Q psy14454          6 KNENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQM   82 (117)
Q Consensus         6 l~Qa~~eKdeaE~El~~~r~k~~R~~e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E~qLhl   82 (117)
                      +-..+.+.+++..++.+.+....-....-.+.+..+...++.++....+....+...+.|+-.|.-++..+++...+
T Consensus        95 lp~le~el~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~L~~~n~~L~~~l~~~~~~~~~l~~~~~~~~~~~~~  171 (206)
T PRK10884         95 VPDLENQVKTLTDKLNNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNQLIVAQKKVDAANLQLDDKQRTIIM  171 (206)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555566666666666655433222222333333444444444444444444444444554455555555554444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	117
3o0z_A	168	RHO-associated protein kinase 1; coiled-coil, tran	92.56
2no2_A	107	HIP-I, huntingtin-interacting protein 1; clathrin	92.3
3hnw_A	138	Uncharacterized protein; coiled-coil, structural g	89.14
3hnw_A	138	Uncharacterized protein; coiled-coil, structural g	85.13
2v71_A	189	Nuclear distribution protein NUDE-like 1; developm	80.21

>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}

Probab=92.56  E-value=1.8  Score=32.97  Aligned_cols=76  Identities=12%  Similarity=0.164  Sum_probs=59.9

Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHHHHHh
Q psy14454          6 KNENNSERESLEQELSNAKLLIERLE---RTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQ   81 (117)
Q Consensus         6 l~Qa~~eKdeaE~El~~~r~k~~R~~---e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E~qLh   81 (117)
                      ..+....|+++++++..+.+.++=+-   .+.-+-+.-|+.-|.++..-|++.-......-.++-.|.|.|+.+||+-.
T Consensus        57 ~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a  135 (168)
T 3o0z_A           57 NRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKN  135 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34566789999999999988765333   33444456677888888888888888889999999999999999999644

>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}

Probab=92.30  E-value=2  Score=30.00  Aligned_cols=72  Identities=21%  Similarity=0.241  Sum_probs=59.2

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHHHHHh
Q psy14454         10 NSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQ   81 (117)
Q Consensus        10 ~~eKdeaE~El~~~r~k~~R~~e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E~qLh   81 (117)
                      -..|.+++..+..+.....+..+..-..++.|+-||..-..-|...+.++.....+...|+..++.++.+.-
T Consensus        28 e~~k~eL~~~~~~~~~~~~~k~~eq~~~le~lk~eL~~~~~el~~lq~~l~~~~~~~~~l~~~~~~l~~Ek~   99 (107)
T 2no2_A           28 EREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQVLQGSLETSAQSEANWAAEFAELEKERD   99 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344566666777777777777777888889999999999999999999999999999999999999877653

>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}

Probab=89.14  E-value=4.7  Score=29.14  Aligned_cols=54  Identities=15%  Similarity=0.166  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHHHHHh
Q psy14454         28 ERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQ   81 (117)
Q Consensus        28 ~R~~e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E~qLh   81 (117)
                      ....+..+.|+..|.-||.+.+=.++.+.+.+...++++-.|-++++.+|..+.
T Consensus        81 ~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~  134 (138)
T 3hnw_A           81 SLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELN  134 (138)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444577888888888888888888888888888888888888888887664

>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}

Probab=85.13  E-value=8.7  Score=27.68  Aligned_cols=60  Identities=17%  Similarity=0.186  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHHHHhHHHHHh
Q psy14454         22 NAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQ   81 (117)
Q Consensus        22 ~~r~k~~R~~e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEqla~~E~qLh   81 (117)
                      +=..+..+..+.-.++++.+..||.+++-.|-.++-.+-.+..++-.|-+.+..+++++.
T Consensus        68 dEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~  127 (138)
T 3hnw_A           68 DDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIV  127 (138)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334566667777788888899999999999999999999999999999999998888875

>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}

Probab=80.21  E-value=18  Score=27.75  Aligned_cols=77  Identities=12%  Similarity=0.097  Sum_probs=44.8

Q ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhHHhHhHHHHhhHHHH----HHhHHHHH
Q psy14454          5 LKNENNSERESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQ----IANIEKEL   80 (117)
Q Consensus         5 ~l~Qa~~eKdeaE~El~~~r~k~~R~~e~~kQEveRL~~EL~~~rQrLE~~q~D~~~~r~E~lrLtEq----la~~E~qL   80 (117)
                      +..+.+.+.+.++.|+.++..-..=-...-..+++.+..-+..++.++.+...++-.||.+.-...-+    ++.+++++
T Consensus        18 ~~~~~~q~~~~le~El~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el   97 (189)
T 2v71_A           18 LSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDL   97 (189)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555666777777777776544333333445556666666666666666666666666655555433    56666654


Q ss_pred             h
Q psy14454         81 Q   81 (117)
Q Consensus        81 h   81 (117)
                      .
T Consensus        98 ~   98 (189)
T 2v71_A           98 S   98 (189)
T ss_dssp             H
T ss_pred             H
Confidence            3

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00