Psyllid ID: psy14495

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760------
MINFKKNFCKKSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALSK
ccccHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccHHHHHHHHHHcHHHHHHHHccccEEEEEEcccccccccccccccccccccccHHHccccccccEEEcccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHcccccccEEEEcccccccccccccccHHHHHHHHHcccccHHHHcccccEEEEccccccccHHHHHHHccccEEEEcccccccccHHHHHcccccEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHccccccccccEEEEcccccccHHHHHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHHcccccEEEEccccccHHHHHHHHHHHccccccccccEEEEEEEcccEEEEEcccccccccHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccHHHHHHHHHHHHHHccccEEEccccHHccccHHHHHcccccccccccccEEEccccccHHHHHHHHHHHccccEEEcccccccccccEEEcccccHHHHHHHHHHHHHHHHcc
cccccccHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHccccccHHHHHHHHcHHHHHHHHccccEEEEEEcccEEEccccccHccccccccccEEEEEEcccccEEEEEEccccHHHHHHHHHHcccccccccHHHccccHHHHHHHHHHHHcccccEcccccHHHHHHHHHHHHHHHHHcccHHHEEEEEccHHHHHHHHHHHHHHcccccccEEEEEcccEEEccccccccHHHHHHHHHcccccHHHHHccccEEEEccccccccHHHHHHHccccEEEEEccccccccHHHHHHHcccEEEEccccccccccccEcccHHHHHcHcccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHcccEEcccccEEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHccccEHHHHHHHcccccEEEEcccccHHHHHHHHHHHHcccccccEHHHHHEEEccccEEEEEEcEEcccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccHHHHHHHHHHHHHHHccccEEcccccccHHccHHHHHHHccccccccccEEEEcccHHHHHHHHHHHHHHcccccEEccEEEcccccEEEEcccccHHHHHHHHHHHHHHHHcc
MINFKKNFCKKSHQSALeyhefpipgkisvipskqlsnqddlalayspgvaSACEEIVSNsnnvfkyttkGNLVAVITNGtavlgmgnigplaskpvmegKAVLFkkfagidvfdleinetdpdklcdiifsleptfgginledikapeCFYIEKKLRnhmkipvfhddqhgTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDlgfplqnifvtDLAGVLYKGRselmdsnkarfikdttartlsdiipnadIFLGLSVSGVLKKEMVLQMAKNPIILAlanplpeilpediksvRNDAIiatgrsdypnqvnnvlcfpyifrgaldsgattITREMEIAAVHAIADLAQIEQSDIVNTTYGitnmtfgseciipkpfdprlmikIAPAVAIAAEksgvatkpikDIEIYTNHLQKFvyrssafmnPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDenlafpilIGRTKILEQHIKKLRLrikpgihfeiidpdfnkQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHkgnadgmicgilgSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDThinenpnaeelSEITILAAKKMFSLGLKPRVAllsnsnfgsnnnisAHKMRTALKLIQKqmpeleidgemngnyALNNELlhkqipnskltgdanllvlpniesANIAYNLLKitsgngvaigpillgcskpihiltsSATVRRIVNMTALCVIDALSK
MINFKKNFCKKSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTtartlsdiipnaDIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIAtgrsdypnqvnNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAeksgvatkpikDIEIYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIysegeeekILRAIQVVIDENLAFPILIGRTKILEQHIKKLRlrikpgihfeiidpdfnkQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALSK
MINFKKNFCKKSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGlklvkkkmkdcklvvsgagaaalacldliidlGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQiakkarknikriiYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLsnsnfgsnnnisAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALSK
****************LEYHEFPIPGKISVIP*******DDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNF***********RTALKLIQ*****LEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDA***
****************LEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFG*********MRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALS*
MINFKKNFCKKSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALSK
******NFCKKSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALS*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MINFKKNFCKKSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query766 2.2.26 [Sep-21-2011]
P76558759 NADP-dependent malic enzy N/A N/A 0.979 0.988 0.558 0.0
Q9ZFV8759 NADP-dependent malic enzy yes N/A 0.975 0.984 0.559 0.0
P43837756 NADP-dependent malic enzy yes N/A 0.975 0.988 0.562 0.0
O30807770 NAD-dependent malic enzym yes N/A 0.975 0.970 0.525 0.0
O30808761 NADP-dependent malic enzy no N/A 0.971 0.977 0.419 1e-159
Q9ZDF6767 Probable NADP-dependent m yes N/A 0.977 0.976 0.449 1e-158
O34962410 Probable NAD-dependent ma yes N/A 0.498 0.931 0.497 6e-96
P16468478 NAD-dependent malic enzym N/A N/A 0.483 0.774 0.455 1e-90
P54572439 Probable NAD-dependent ma no N/A 0.404 0.706 0.365 3e-47
Q726S7704 Phosphate acetyltransfera no N/A 0.432 0.470 0.306 1e-42
>sp|P76558|MAO2_ECOLI NADP-dependent malic enzyme OS=Escherichia coli (strain K12) GN=maeB PE=1 SV=1 Back     alignment and function desciption
 Score =  885 bits (2286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/754 (55%), Positives = 567/754 (75%), Gaps = 4/754 (0%)

Query: 14  QSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNL 73
           QSAL++HEFP+PGKI V P+K L+ Q DLALAYSPGVA+ C EI  +    +KYT +GNL
Sbjct: 7   QSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKYTARGNL 66

Query: 74  VAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSL 133
           VAVI+NGTAVLG+GNIG LA KPVMEGK VLFKKFAGIDVFD+E++E DPDK  +++ +L
Sbjct: 67  VAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFIEVVAAL 126

Query: 134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMK 193
           EPTFGGINLEDIKAPECFYIE+KLR  M IPVFHDDQHGTAII  +AILNGL++V+K + 
Sbjct: 127 EPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRVVEKNIS 186

Query: 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARF-IKDTT 252
           D ++VVSGAGAAA+AC++L++ LG    NI V D  GV+Y+GR   M   KA + + D  
Sbjct: 187 DVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAYAVVDDG 246

Query: 253 ARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAI 312
            RTL D+I  ADIFLG S   VL +EMV +MA+ P+ILALANP PEILP   K VR DAI
Sbjct: 247 KRTLDDVIEGADIFLGCSGPKVLTQEMVKKMARAPMILALANPEPEILPPLAKEVRPDAI 306

Query: 313 IATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTT 372
           I TGRSDYPNQVNNVLCFP+IFRGALD GAT I  EM++AAV AIA+LA  EQS++V + 
Sbjct: 307 ICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVRAIAELAHAEQSEVVASA 366

Query: 373 YGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYR 432
           YG  +++FG E IIPKPFDPRL++KIAPAVA AA +SGVAT+PI D ++Y + L +FVY+
Sbjct: 367 YGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMESGVATRPIADFDVYIDKLTEFVYK 426

Query: 433 SSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHI 492
           ++ FM PIF    +ARK  KR++  EGEE ++L A Q ++   LA PILIGR  ++E  I
Sbjct: 427 TNLFMKPIFS---QARKAPKRVVLPEGEEARVLHATQELVTLGLAKPILIGRPNVIEMRI 483

Query: 493 KKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMA 552
           +KL L+IK G+ FEI++ + + ++K+YW  Y  +  R+G+ ++ AQ  +    T+IGA+ 
Sbjct: 484 QKLGLQIKAGVDFEIVNNESDPRFKEYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIM 543

Query: 553 IHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINEN 612
           + +G AD MICG +G    H + +  + G ++  +   AM+ L+L      + DT++N+ 
Sbjct: 544 VQRGEADAMICGTVGDYHEHFSVVKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDE 603

Query: 613 PNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELE 672
           P+AEEL+EIT++AA+ +   G++PRVALLS+SNFGS++  S+ KMR AL+L++++ PEL 
Sbjct: 604 PDAEELAEITLMAAETVRRFGIEPRVALLSHSNFGSSDCPSSSKMRQALELVRERAPELM 663

Query: 673 IDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPI 732
           IDGEM+G+ AL   + + ++P+S L G AN+LV+PN+E+A I+YNLL+++S  GV +GP+
Sbjct: 664 IDGEMHGDAALVEAIRNDRMPDSSLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPV 723

Query: 733 LLGCSKPIHILTSSATVRRIVNMTALCVIDALSK 766
           L+G +KP+H+LT  A+VRRIVNM AL V++A ++
Sbjct: 724 LMGVAKPVHVLTPIASVRRIVNMVALAVVEAQTQ 757

Escherichia coli (strain K12) (taxid: 83333)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 0
>sp|Q9ZFV8|MAO2_SALTY NADP-dependent malic enzyme OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=maeB PE=3 SV=2 Back     alignment and function description
>sp|P43837|MAO2_HAEIN NADP-dependent malic enzyme OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=maeB PE=3 SV=1 Back     alignment and function description
>sp|O30807|MAO1_RHIME NAD-dependent malic enzyme OS=Rhizobium meliloti (strain 1021) GN=dme PE=1 SV=1 Back     alignment and function description
>sp|O30808|MAO2_RHIME NADP-dependent malic enzyme OS=Rhizobium meliloti (strain 1021) GN=tme PE=1 SV=2 Back     alignment and function description
>sp|Q9ZDF6|MAO2_RICPR Probable NADP-dependent malic enzyme OS=Rickettsia prowazekii (strain Madrid E) GN=RP373 PE=3 SV=1 Back     alignment and function description
>sp|O34962|MAO4_BACSU Probable NAD-dependent malic enzyme 4 OS=Bacillus subtilis (strain 168) GN=ytsJ PE=3 SV=1 Back     alignment and function description
>sp|P16468|MAOX_GEOSE NAD-dependent malic enzyme OS=Geobacillus stearothermophilus PE=3 SV=1 Back     alignment and function description
>sp|P54572|MAO1_BACSU Probable NAD-dependent malic enzyme 1 OS=Bacillus subtilis (strain 168) GN=yqkJ PE=3 SV=1 Back     alignment and function description
>sp|Q726S7|PTA_DESVH Phosphate acetyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=pta PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query766
399019695770 malic enzyme [Herbaspirillum sp. CF444] 1.0 0.994 0.727 0.0
415926468767 NADP-dependent malic enzyme oxidoreducta 1.0 0.998 0.715 0.0
340786038770 NADP-dependent malic enzyme [Collimonas 0.998 0.993 0.724 0.0
398832609767 malic enzyme [Herbaspirillum sp. YR522] 1.0 0.998 0.715 0.0
300312657770 NADP-dependent malic enzyme oxidoreducta 1.0 0.994 0.714 0.0
409407167767 NADP-dependent malic enzyme oxidoreducta 1.0 0.998 0.715 0.0
395764080762 bifunctional malic enzyme oxidoreductase 0.981 0.986 0.715 0.0
329901080770 NADP-dependent malic enzyme [Oxalobacter 1.0 0.994 0.711 0.0
445499416772 NADP-dependent malic enzyme MaeB [Janthi 0.994 0.987 0.687 0.0
427400503770 phosphate acetyltransferase [Massilia ti 0.994 0.989 0.691 0.0
>gi|399019695|ref|ZP_10721841.1| malic enzyme [Herbaspirillum sp. CF444] gi|398097586|gb|EJL87890.1| malic enzyme [Herbaspirillum sp. CF444] Back     alignment and taxonomy information
 Score = 1170 bits (3028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/766 (72%), Positives = 673/766 (87%)

Query: 1   MINFKKNFCKKSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSN 60
           MI+ K+   ++  Q+ALEYHEFP PGKISV P+K L+NQ DL+LAYSPGVA+ACEEIV++
Sbjct: 4   MISKKEEVRQQLRQAALEYHEFPTPGKISVTPTKLLTNQRDLSLAYSPGVAAACEEIVAD 63

Query: 61  SNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINE 120
             N FKYT +GNLVAVI+NGTAVLG+GNIGPLASKPVMEGK VLFKKFAGIDVFD+EINE
Sbjct: 64  PANAFKYTARGNLVAVISNGTAVLGLGNIGPLASKPVMEGKGVLFKKFAGIDVFDIEINE 123

Query: 121 TDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSA 180
           TDPDKLCDII SLEPTFGGINLEDIKAPECFYIE+KLR+ MKIPVFHDDQHGTAIIVG+A
Sbjct: 124 TDPDKLCDIIASLEPTFGGINLEDIKAPECFYIERKLRDRMKIPVFHDDQHGTAIIVGAA 183

Query: 181 ILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELM 240
           ILNGLK+V K MK+ KLVVSGAGAAALACLDLI+DLGFP++NI+VTDLAGV+YKGR+ELM
Sbjct: 184 ILNGLKVVGKNMKEVKLVVSGAGAAALACLDLIVDLGFPIENIYVTDLAGVVYKGRTELM 243

Query: 241 DSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEIL 300
           D +K RF ++T ARTL+D+IP+ADIFLG+S  GVLK++MV +MA  P++LALANP PEIL
Sbjct: 244 DPDKERFARETDARTLADVIPDADIFLGVSAGGVLKQDMVKKMAPRPLVLALANPTPEIL 303

Query: 301 PEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADL 360
           PED+ +VR+DA+IATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIA+L
Sbjct: 304 PEDVMAVRDDAVIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIAEL 363

Query: 361 AQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIE 420
           AQ EQSDIV  TYG+TN++FG E IIPKPFDPRLMIKIA AVA AAE SGVA +PI+D+ 
Sbjct: 364 AQAEQSDIVAATYGVTNLSFGPEYIIPKPFDPRLMIKIATAVARAAETSGVAARPIRDMN 423

Query: 421 IYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPI 480
            Y   L++FVY S  FM PIFQ AKKA +  KRI+++EGEEE+ILRA+QV++DE LA PI
Sbjct: 424 AYAEKLEQFVYHSGTFMRPIFQAAKKAPETKKRIVFAEGEEERILRAVQVIVDECLAKPI 483

Query: 481 LIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLK 540
           L+GR ++LEQ IKK  LR++P + FE+I+P+F+ +Y+DYW+T+L MT R+G+ EQYA+L+
Sbjct: 484 LVGRPEVLEQRIKKFGLRLRPDVDFEVINPNFDSRYRDYWQTFLEMTKRRGVTEQYAKLE 543

Query: 541 MRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDR 600
           MR+ +TLIG+MAIHKG+ADGMICG  G+T+LHL+YIDQ++GK+   N+YAAM+ +IL  R
Sbjct: 544 MRRRHTLIGSMAIHKGDADGMICGTYGTTQLHLHYIDQVLGKREGVNVYAAMNGVILPSR 603

Query: 601 QLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTA 660
           QL+LVDTH+NENP AEEL+EITI+AA++M   GL PR ALLS+SNFGS+N+ SA KMR A
Sbjct: 604 QLVLVDTHVNENPTAEELAEITIMAAEEMRRFGLHPRAALLSHSNFGSSNSESAIKMRKA 663

Query: 661 LKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLK 720
           LKLIQ+Q PELE DGEM+G+ AL+ +LL + +P+S L GDANLLV+PNI++ANIAYNLLK
Sbjct: 664 LKLIQEQAPELEADGEMHGDTALDPKLLAQIMPDSPLKGDANLLVMPNIDAANIAYNLLK 723

Query: 721 ITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALSK 766
             SGNGVAIGPILLGC+KP+HILT+SATVRRIVNMTALCV+DA+S+
Sbjct: 724 TASGNGVAIGPILLGCAKPVHILTASATVRRIVNMTALCVMDAMSE 769

Source: Herbaspirillum sp. CF444

Species: Herbaspirillum sp. CF444

Genus: Herbaspirillum

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria
>gi|415926468|ref|ZP_11555009.1| NADP-dependent malic enzyme oxidoreductase protein [Herbaspirillum frisingense GSF30] gi|407760159|gb|EKF69539.1| NADP-dependent malic enzyme oxidoreductase protein [Herbaspirillum frisingense GSF30] Back     alignment and taxonomy information
>gi|340786038|ref|YP_004751503.1| NADP-dependent malic enzyme [Collimonas fungivorans Ter331] gi|340551305|gb|AEK60680.1| NADP-dependent malic enzyme [Collimonas fungivorans Ter331] Back     alignment and taxonomy information
>gi|398832609|ref|ZP_10590766.1| malic enzyme [Herbaspirillum sp. YR522] gi|398222946|gb|EJN09302.1| malic enzyme [Herbaspirillum sp. YR522] Back     alignment and taxonomy information
>gi|300312657|ref|YP_003776749.1| NADP-dependent malic enzyme oxidoreductase [Herbaspirillum seropedicae SmR1] gi|124483420|emb|CAM32583.1| NADP-dependent malic enzyme oxidoreductase protein [Herbaspirillum seropedicae] gi|300075442|gb|ADJ64841.1| NADP-dependent malic enzyme oxidoreductase protein [Herbaspirillum seropedicae SmR1] Back     alignment and taxonomy information
>gi|409407167|ref|ZP_11255618.1| NADP-dependent malic enzyme oxidoreductase [Herbaspirillum sp. GW103] gi|386432918|gb|EIJ45744.1| NADP-dependent malic enzyme oxidoreductase [Herbaspirillum sp. GW103] Back     alignment and taxonomy information
>gi|395764080|ref|ZP_10444749.1| bifunctional malic enzyme oxidoreductase/phosphotransacetylase [Janthinobacterium lividum PAMC 25724] Back     alignment and taxonomy information
>gi|329901080|ref|ZP_08272702.1| NADP-dependent malic enzyme [Oxalobacteraceae bacterium IMCC9480] gi|327549245|gb|EGF33827.1| NADP-dependent malic enzyme [Oxalobacteraceae bacterium IMCC9480] Back     alignment and taxonomy information
>gi|445499416|ref|ZP_21466271.1| NADP-dependent malic enzyme MaeB [Janthinobacterium sp. HH01] gi|444789411|gb|ELX10959.1| NADP-dependent malic enzyme MaeB [Janthinobacterium sp. HH01] Back     alignment and taxonomy information
>gi|427400503|ref|ZP_18891741.1| phosphate acetyltransferase [Massilia timonae CCUG 45783] gi|425720543|gb|EKU83464.1| phosphate acetyltransferase [Massilia timonae CCUG 45783] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query766
UNIPROTKB|P76558759 maeB "MaeB" [Escherichia coli 0.975 0.984 0.521 4.2e-205
TIGR_CMR|SPO_2932757 SPO_2932 "malate dehydrogenase 0.966 0.977 0.473 2e-184
TIGR_CMR|GSU_1700752 GSU_1700 "NADP-dependent malic 0.973 0.992 0.451 6.5e-161
TIGR_CMR|ECH_0175758 ECH_0175 "malate dehydrogenase 0.976 0.986 0.417 9.3e-146
UNIPROTKB|Q0C5G7755 maeB "NADP-dependent malic enz 0.955 0.969 0.414 2.2e-144
UNIPROTKB|Q2GLS5751 APH_0042 "Malate dehydrogenase 0.971 0.990 0.399 1.5e-136
TIGR_CMR|APH_0042751 APH_0042 "malate dehydrogenase 0.971 0.990 0.399 1.5e-136
TIGR_CMR|SPO_0012751 SPO_0012 "NADP-dependent malic 0.966 0.985 0.381 9.6e-128
TIGR_CMR|NSE_0420750 NSE_0420 "malate dehydrogenase 0.962 0.982 0.395 7.8e-126
TIGR_CMR|SO_4118414 SO_4118 "malate oxidoreductase 0.520 0.963 0.503 3.8e-101
UNIPROTKB|P76558 maeB "MaeB" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
 Score = 1984 (703.5 bits), Expect = 4.2e-205, P = 4.2e-205
 Identities = 392/751 (52%), Positives = 519/751 (69%)

Query:    14 QSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNL 73
             QSAL++HEFP+PGKI V P+K L+ Q DLALAYSPGVA+ C EI  +    +KYT +GNL
Sbjct:     7 QSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKYTARGNL 66

Query:    74 VAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSL 133
             VAVI+NGTAVLG+GNIG LA KPVMEGK VLFKKFAGIDVFD+E++E DPDK  +++ +L
Sbjct:    67 VAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFIEVVAAL 126

Query:   134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGXXXXXXXXX 193
             EPTFGGINLEDIKAPECFYIE+KLR  M IPVFHDDQHGTAII  +AILNG         
Sbjct:   127 EPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRVVEKNIS 186

Query:   194 XXXXXXXXXXXXXXXXXXXXXXXGFPLQNIFVTDLAGVLYKGRSELMDSNKARF-IKDTT 252
                                    G    NI V D  GV+Y+GR   M   KA + + D  
Sbjct:   187 DVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAYAVVDDG 246

Query:   253 ARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAI 312
              RTL D+I  ADIFLG S   VL +EMV +MA+ P+ILALANP PEILP   K VR DAI
Sbjct:   247 KRTLDDVIEGADIFLGCSGPKVLTQEMVKKMARAPMILALANPEPEILPPLAKEVRPDAI 306

Query:   313 IATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTT 372
             I TGRSDYPNQVNNVLCFP+IFRGALD GAT I  EM++AAV AIA+LA  EQS++V + 
Sbjct:   307 ICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVRAIAELAHAEQSEVVASA 366

Query:   373 YGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYR 432
             YG  +++FG E IIPKPFDPRL++KIAPAVA AA +SGVAT+PI D ++Y + L +FVY+
Sbjct:   367 YGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMESGVATRPIADFDVYIDKLTEFVYK 426

Query:   433 SSAFMNPIFQXXXXXXXXXXXXXYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHI 492
             ++ FM PIF                EGEE ++L A Q ++   LA PILIGR  ++E  I
Sbjct:   427 TNLFMKPIFSQARKAPKRVVL---PEGEEARVLHATQELVTLGLAKPILIGRPNVIEMRI 483

Query:   493 KKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMA 552
             +KL L+IK G+ FEI++ + + ++K+YW  Y  +  R+G+ ++ AQ  +    T+IGA+ 
Sbjct:   484 QKLGLQIKAGVDFEIVNNESDPRFKEYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIM 543

Query:   553 IHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINEN 612
             + +G AD MICG +G    H + +  + G ++  +   AM+ L+L      + DT++N+ 
Sbjct:   544 VQRGEADAMICGTVGDYHEHFSVVKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDE 603

Query:   613 PNAEELSEITILAAKKMFSLGLKPRVALLXXXXXXXXXXXXAHKMRTALKLIQKQMPELE 672
             P+AEEL+EIT++AA+ +   G++PRVALL            + KMR AL+L++++ PEL 
Sbjct:   604 PDAEELAEITLMAAETVRRFGIEPRVALLSHSNFGSSDCPSSSKMRQALELVRERAPELM 663

Query:   673 IDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPI 732
             IDGEM+G+ AL   + + ++P+S L G AN+LV+PN+E+A I+YNLL+++S  GV +GP+
Sbjct:   664 IDGEMHGDAALVEAIRNDRMPDSSLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPV 723

Query:   733 LLGCSKPIHILTSSATVRRIVNMTALCVIDA 763
             L+G +KP+H+LT  A+VRRIVNM AL V++A
Sbjct:   724 LMGVAKPVHVLTPIASVRRIVNMVALAVVEA 754
GO:0051287 "NAD binding" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA
GO:0006108 "malate metabolic process" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
GO:0030145 "manganese ion binding" evidence=IEA;IDA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005829 "cytosol" evidence=IEA;IDA
GO:0008152 "metabolic process" evidence=IEA
GO:0004473 "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity" evidence=IEA;IMP;IDA
TIGR_CMR|SPO_2932 SPO_2932 "malate dehydrogenase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1700 GSU_1700 "NADP-dependent malic enzyme" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0175 ECH_0175 "malate dehydrogenase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C5G7 maeB "NADP-dependent malic enzyme" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms
UNIPROTKB|Q2GLS5 APH_0042 "Malate dehydrogenase" [Anaplasma phagocytophilum HZ (taxid:212042)] Back     alignment and assigned GO terms
TIGR_CMR|APH_0042 APH_0042 "malate dehydrogenase" [Anaplasma phagocytophilum HZ (taxid:212042)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0012 SPO_0012 "NADP-dependent malic enzyme" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|NSE_0420 NSE_0420 "malate dehydrogenase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] Back     alignment and assigned GO terms
TIGR_CMR|SO_4118 SO_4118 "malate oxidoreductase, putative" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZDF6MAO2_RICPR1, ., 1, ., 1, ., 4, 00.44990.97780.9765yesN/A
P43837MAO2_HAEIN1, ., 1, ., 1, ., 4, 00.56250.97510.9880yesN/A
O30807MAO1_RHIME1, ., 1, ., 1, ., 3, 90.52530.97510.9701yesN/A
P76558MAO2_ECOLI1, ., 1, ., 1, ., 4, 00.55830.97910.9881N/AN/A
Q9ZFV8MAO2_SALTY1, ., 1, ., 1, ., 4, 00.55920.97510.9841yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.1.10.963
3rd Layer2.3.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query766
PRK07232752 PRK07232, PRK07232, bifunctional malic enzyme oxid 0.0
PRK12862763 PRK12862, PRK12862, malic enzyme; Reviewed 0.0
PRK12861764 PRK12861, PRK12861, malic enzyme; Reviewed 0.0
COG0281432 COG0281, SfcA, Malic enzyme [Energy production and 0.0
COG0280327 COG0280, Pta, Phosphotransacetylase [Energy produc 1e-108
smart00919231 smart00919, Malic_M, Malic enzyme, NAD binding dom 1e-104
cd05311226 cd05311, NAD_bind_2_malic_enz, NAD(P) binding doma 3e-94
pfam01515319 pfam01515, PTA_PTB, Phosphate acetyl/butaryl trans 2e-87
pfam03949255 pfam03949, Malic_M, Malic enzyme, NAD binding doma 1e-73
PRK09653324 PRK09653, eutD, phosphotransacetylase; Reviewed 3e-55
TIGR00651303 TIGR00651, pta, phosphate acetyltransferase 7e-55
pfam00390182 pfam00390, malic, Malic enzyme, N-terminal domain 4e-36
PTZ00317559 PTZ00317, PTZ00317, NADP-dependent malic enzyme; P 5e-34
cd05312279 cd05312, NAD_bind_1_malic_enz, NAD(P) binding doma 8e-33
PRK05632684 PRK05632, PRK05632, phosphate acetyltransferase; R 7e-32
PRK13529563 PRK13529, PRK13529, malate dehydrogenase; Provisio 4e-29
cd00762254 cd00762, NAD_bind_malic_enz, NAD(P) binding domain 6e-26
PLN03129581 PLN03129, PLN03129, NADP-dependent malic enzyme; P 3e-25
TIGR02706294 TIGR02706, P_butyryltrans, phosphate butyryltransf 1e-11
PRK07742299 PRK07742, PRK07742, phosphate butyryltransferase; 2e-07
PRK05805301 PRK05805, PRK05805, phosphate butyryltransferase; 3e-07
TIGR02709271 TIGR02709, branched_ptb, branched-chain phosphotra 3e-04
PRK11890312 PRK11890, PRK11890, phosphate acetyltransferase; P 0.002
>gnl|CDD|235976 PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed Back     alignment and domain information 
 Score = 1298 bits (3362), Expect = 0.0
 Identities = 454/750 (60%), Positives = 582/750 (77%), Gaps = 4/750 (0%)

Query: 14  QSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNL 73
           Q+AL+YH FP PGKI V P+K L+ Q DL+LAYSPGVA+ C EI  +  + +KYT +GNL
Sbjct: 5   QAALDYHRFPRPGKIEVTPTKPLATQRDLSLAYSPGVAAPCLEIAKDPADAYKYTARGNL 64

Query: 74  VAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSL 133
           VAVI+NGTAVLG+GNIG LASKPVMEGK VLFKKFAGIDVFD+E++E DPDK  + + +L
Sbjct: 65  VAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAGIDVFDIEVDEEDPDKFIEAVAAL 124

Query: 134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMK 193
           EPTFGGINLEDIKAPECFYIE+KLR  M IPVFHDDQHGTAII  +A+LN L+LV KK++
Sbjct: 125 EPTFGGINLEDIKAPECFYIEEKLRERMDIPVFHDDQHGTAIISAAALLNALELVGKKIE 184

Query: 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTA 253
           D K+VVSGAGAAA+ACL+L++ LG   +NI V D  GV+YKGR+E MD  KA +  DT A
Sbjct: 185 DVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSKGVIYKGRTEGMDEWKAAYAVDTDA 244

Query: 254 RTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAII 313
           RTL++ I  AD+FLGLS +GVL  EMV  MA NPII ALANP PEI PE+ K+VR DAII
Sbjct: 245 RTLAEAIEGADVFLGLSAAGVLTPEMVKSMADNPIIFALANPDPEITPEEAKAVRPDAII 304

Query: 314 ATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTY 373
           ATGRSDYPNQVNNVLCFPYIFRGALD GATTI  EM++AAV AIA+LA+ E SD V   Y
Sbjct: 305 ATGRSDYPNQVNNVLCFPYIFRGALDVGATTINEEMKLAAVRAIAELAREEVSDEVAAAY 364

Query: 374 GITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRS 433
           G   ++FG E IIPKPFDPRL++KIAPAVA AA  SGVAT+PI D++ Y   L+ FVY++
Sbjct: 365 GGQKLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMDSGVATRPIADMDAYREKLEAFVYKT 424

Query: 434 SAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIK 493
              M PIF    KA+K+ KR++++EGEEE++LRA Q V+DE LA PILIGR +++E  IK
Sbjct: 425 GLVMKPIFA---KAKKDPKRVVFAEGEEERVLRAAQEVVDEGLAKPILIGRPEVIEARIK 481

Query: 494 KLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAI 553
           KL L +K G+ FEI++P+ + +Y++YW+ Y  +  RKG+  + A+  +R+  T+IGAM +
Sbjct: 482 KLGLDLKAGVDFEIVNPEDDPRYEEYWQYYYELLQRKGVTPEDARRLVRRDRTVIGAMMV 541

Query: 554 HKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENP 613
            +G+AD MICG+ G    HL  + Q+IG +   +  AAM+ L+L    L + DT++NE+P
Sbjct: 542 ARGDADAMICGLTGRYHEHLRPVRQVIGLRPGVHTAAAMNALLLKGGNLFIADTYVNEDP 601

Query: 614 NAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEI 673
            AEEL+EI ++AA+++   G++PRVALLS+SNFGS+++ SA KMR A++L++++ P+LE+
Sbjct: 602 TAEELAEIALMAAEEVRRFGIEPRVALLSHSNFGSSDSPSARKMREAVELLRERAPDLEV 661

Query: 674 DGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPIL 733
           DGEM+G+ ALN E+     P S+L G AN+LV+PN+E+ANI+YNLLK   G GV IGPIL
Sbjct: 662 DGEMHGDAALNEEIRKDLYPFSRLKGPANVLVMPNLEAANISYNLLKEL-GGGVTIGPIL 720

Query: 734 LGCSKPIHILTSSATVRRIVNMTALCVIDA 763
           LG +KP+HILT SATVRRIVNMTAL V+DA
Sbjct: 721 LGMAKPVHILTPSATVRRIVNMTALAVVDA 750

Length = 752
>gnl|CDD|183799 PRK12862, PRK12862, malic enzyme; Reviewed Back     alignment and domain information
>gnl|CDD|183798 PRK12861, PRK12861, malic enzyme; Reviewed Back     alignment and domain information
>gnl|CDD|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|223357 COG0280, Pta, Phosphotransacetylase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|214912 smart00919, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|133453 cd05311, NAD_bind_2_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>gnl|CDD|216545 pfam01515, PTA_PTB, Phosphate acetyl/butaryl transferase Back     alignment and domain information
>gnl|CDD|217809 pfam03949, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|236609 PRK09653, eutD, phosphotransacetylase; Reviewed Back     alignment and domain information
>gnl|CDD|233072 TIGR00651, pta, phosphate acetyltransferase Back     alignment and domain information
>gnl|CDD|215894 pfam00390, malic, Malic enzyme, N-terminal domain Back     alignment and domain information
>gnl|CDD|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|133454 cd05312, NAD_bind_1_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 1 Back     alignment and domain information
>gnl|CDD|235537 PRK05632, PRK05632, phosphate acetyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|133442 cd00762, NAD_bind_malic_enz, NAD(P) binding domain of malic enzyme Back     alignment and domain information
>gnl|CDD|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|162980 TIGR02706, P_butyryltrans, phosphate butyryltransferase Back     alignment and domain information
>gnl|CDD|236086 PRK07742, PRK07742, phosphate butyryltransferase; Validated Back     alignment and domain information
>gnl|CDD|180267 PRK05805, PRK05805, phosphate butyryltransferase; Validated Back     alignment and domain information
>gnl|CDD|131756 TIGR02709, branched_ptb, branched-chain phosphotransacylase Back     alignment and domain information
>gnl|CDD|183361 PRK11890, PRK11890, phosphate acetyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 766
PRK07232752 bifunctional malic enzyme oxidoreductase/phosphotr 100.0
PRK12861764 malic enzyme; Reviewed 100.0
PRK12862763 malic enzyme; Reviewed 100.0
COG0281432 SfcA Malic enzyme [Energy production and conversio 100.0
PRK13529563 malate dehydrogenase; Provisional 100.0
PLN03129581 NADP-dependent malic enzyme; Provisional 100.0
PTZ00317559 NADP-dependent malic enzyme; Provisional 100.0
KOG1257|consensus582 100.0
COG0280327 Pta Phosphotransacetylase [Energy production and c 100.0
PRK09653324 eutD phosphotransacetylase; Reviewed 100.0
PF01515319 PTA_PTB: Phosphate acetyl/butaryl transferase; Int 100.0
TIGR00651303 pta phosphate acetyltransferase. Model contains a 100.0
PRK05632684 phosphate acetyltransferase; Reviewed 100.0
cd05312279 NAD_bind_1_malic_enz NAD(P) binding domain of mali 100.0
PF03949255 Malic_M: Malic enzyme, NAD binding domain; InterPr 100.0
cd00762254 NAD_bind_malic_enz NAD(P) binding domain of malic 100.0
PRK11890312 phosphate acetyltransferase; Provisional 100.0
PRK05805301 phosphate butyryltransferase; Validated 100.0
PRK07742299 phosphate butyryltransferase; Validated 100.0
TIGR02706294 P_butyryltrans phosphate butyryltransferase. Membe 100.0
PRK08190466 bifunctional enoyl-CoA hydratase/phosphate acetylt 100.0
TIGR02709271 branched_ptb branched-chain phosphotransacylase. T 100.0
cd05311226 NAD_bind_2_malic_enz NAD(P) binding domain of mali 100.0
PRK05331334 putative phosphate acyltransferase; Provisional 100.0
TIGR00182322 plsX fatty acid/phospholipid synthesis protein Pls 100.0
COG0416338 PlsX Fatty acid/phospholipid biosynthesis enzyme [ 100.0
PRK13846316 putative glycerol-3-phosphate acyltransferase PlsX 100.0
PRK13845437 putative glycerol-3-phosphate acyltransferase PlsX 100.0
PF02504323 FA_synthesis: Fatty acid synthesis protein; InterP 100.0
PF00390182 malic: Malic enzyme, N-terminal domain; InterPro: 100.0
TIGR03270202 methan_mark_4 putative methanogen marker protein 4 100.0
COG4002256 Predicted phosphotransacetylase [General function 99.57
cd0519186 NAD_bind_amino_acid_DH NAD(P) binding domain of am 98.77
PRK03743332 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 98.63
PRK01909329 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 98.61
PRK02746345 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 98.6
PRK05312336 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 98.57
TIGR00557320 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase. 98.55
PF04166298 PdxA: Pyridoxal phosphate biosynthetic protein Pdx 98.5
PRK03371326 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 98.46
PRK00232332 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 98.39
PRK03946307 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 97.93
TIGR02853287 spore_dpaA dipicolinic acid synthetase, A subunit. 97.85
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 97.77
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 97.74
COG1995332 PdxA Pyridoxal phosphate biosynthesis protein [Coe 97.69
PLN02494477 adenosylhomocysteinase 97.56
PRK08306296 dipicolinate synthase subunit A; Reviewed 97.54
TIGR00936406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 97.44
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 97.43
cd05313254 NAD_bind_2_Glu_DH NAD(P) binding domain of glutama 97.34
cd01076227 NAD_bind_1_Glu_DH NAD(P) binding domain of glutama 97.26
PRK14192283 bifunctional 5,10-methylene-tetrahydrofolate dehyd 97.23
TIGR01035417 hemA glutamyl-tRNA reductase. This enzyme, togethe 97.18
PTZ00075476 Adenosylhomocysteinase; Provisional 97.16
PRK14030445 glutamate dehydrogenase; Provisional 97.15
cd05211217 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of 97.11
PRK00045423 hemA glutamyl-tRNA reductase; Reviewed 97.08
cd01080168 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of 97.03
PLN02477410 glutamate dehydrogenase 97.02
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 96.93
PTZ00079454 NADP-specific glutamate dehydrogenase; Provisional 96.89
cd05213311 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain 96.86
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 96.84
cd01075200 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l 96.75
PRK14175286 bifunctional 5,10-methylene-tetrahydrofolate dehyd 96.75
COG0373414 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] 96.73
PLN00203519 glutamyl-tRNA reductase 96.71
PF0380796 F420_oxidored: NADP oxidoreductase coenzyme F420-d 96.63
PRK09414445 glutamate dehydrogenase; Provisional 96.56
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 96.49
TIGR01809282 Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO 96.43
PRK12549284 shikimate 5-dehydrogenase; Reviewed 96.17
PRK14031444 glutamate dehydrogenase; Provisional 96.16
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 96.09
PLN02928347 oxidoreductase family protein 96.02
PRK12548289 shikimate 5-dehydrogenase; Provisional 96.02
PRK14982340 acyl-ACP reductase; Provisional 95.99
PRK14191285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 95.95
PF00208244 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val 95.93
PRK13940414 glutamyl-tRNA reductase; Provisional 95.93
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 95.91
PF02826178 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy 95.84
PRK07574385 formate dehydrogenase; Provisional 95.5
cd01079197 NAD_bind_m-THF_DH NAD binding domain of methylene- 95.47
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 95.45
PRK00676338 hemA glutamyl-tRNA reductase; Validated 95.44
PRK10792285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 95.31
cd05212140 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom 95.25
PRK00257381 erythronate-4-phosphate dehydrogenase; Validated 95.17
PRK14176287 bifunctional 5,10-methylene-tetrahydrofolate dehyd 95.11
PRK09424509 pntA NAD(P) transhydrogenase subunit alpha; Provis 94.89
PRK14189285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 94.89
PRK15438378 erythronate-4-phosphate dehydrogenase PdxB; Provis 94.83
PRK14194301 bifunctional 5,10-methylene-tetrahydrofolate dehyd 94.76
PRK12550272 shikimate 5-dehydrogenase; Reviewed 94.76
PRK14183281 bifunctional 5,10-methylene-tetrahydrofolate dehyd 94.73
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 94.61
PRK14172278 bifunctional 5,10-methylene-tetrahydrofolate dehyd 94.61
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 94.59
PLN00106323 malate dehydrogenase 94.43
PRK08605332 D-lactate dehydrogenase; Validated 94.41
PRK13243333 glyoxylate reductase; Reviewed 94.39
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 94.33
PRK14178279 bifunctional 5,10-methylene-tetrahydrofolate dehyd 94.18
COG0111324 SerA Phosphoglycerate dehydrogenase and related de 94.17
PRK00258278 aroE shikimate 5-dehydrogenase; Reviewed 94.14
PRK14179284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 94.14
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 94.09
PRK14166282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 93.82
PRK14184286 bifunctional 5,10-methylene-tetrahydrofolate dehyd 93.72
PF02882160 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl 93.58
PRK12480330 D-lactate dehydrogenase; Provisional 93.5
PRK14177284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 93.44
PLN03139386 formate dehydrogenase; Provisional 93.42
PRK12749288 quinate/shikimate dehydrogenase; Reviewed 93.33
PRK15469312 ghrA bifunctional glyoxylate/hydroxypyruvate reduc 93.27
PRK08410311 2-hydroxyacid dehydrogenase; Provisional 93.23
PRK14190284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 93.22
PRK14188296 bifunctional 5,10-methylene-tetrahydrofolate dehyd 93.15
TIGR00507270 aroE shikimate 5-dehydrogenase. This model finds p 93.01
PLN02306386 hydroxypyruvate reductase 92.98
PRK14027283 quinate/shikimate dehydrogenase; Provisional 92.77
PTZ00117319 malate dehydrogenase; Provisional 92.71
PLN02527306 aspartate carbamoyltransferase 92.71
PRK14174295 bifunctional 5,10-methylene-tetrahydrofolate dehyd 92.58
PLN02516299 methylenetetrahydrofolate dehydrogenase (NADP+) 92.53
PRK06487317 glycerate dehydrogenase; Provisional 92.48
TIGR02992326 ectoine_eutC ectoine utilization protein EutC. Mem 92.46
PRK13581526 D-3-phosphoglycerate dehydrogenase; Provisional 92.38
PRK07680273 late competence protein ComER; Validated 92.32
PRK08762376 molybdopterin biosynthesis protein MoeB; Validated 92.26
PRK14170284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 92.19
PRK14171288 bifunctional 5,10-methylene-tetrahydrofolate dehyd 92.11
COG0499420 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me 92.07
COG0334411 GdhA Glutamate dehydrogenase/leucine dehydrogenase 91.97
PRK05600370 thiamine biosynthesis protein ThiF; Validated 91.89
PRK06932314 glycerate dehydrogenase; Provisional 91.86
PRK14181287 bifunctional 5,10-methylene-tetrahydrofolate dehyd 91.86
PRK14187294 bifunctional 5,10-methylene-tetrahydrofolate dehyd 91.85
COG0169283 AroE Shikimate 5-dehydrogenase [Amino acid transpo 91.76
PRK14169282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 91.75
PRK11790409 D-3-phosphoglycerate dehydrogenase; Provisional 91.73
PRK08223287 hypothetical protein; Validated 91.67
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 91.66
TIGR00670301 asp_carb_tr aspartate carbamoyltransferase. Ornith 91.57
PRK07878392 molybdopterin biosynthesis-like protein MoeZ; Vali 91.42
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 91.39
PRK14193284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 91.29
TIGR01327525 PGDH D-3-phosphoglycerate dehydrogenase. This mode 91.21
PRK14168297 bifunctional 5,10-methylene-tetrahydrofolate dehyd 91.03
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 91.03
PRK14182282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 91.03
PRK06223307 malate dehydrogenase; Reviewed 90.92
PRK14185293 bifunctional 5,10-methylene-tetrahydrofolate dehyd 90.9
PLN02688266 pyrroline-5-carboxylate reductase 90.73
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 90.7
PRK14167297 bifunctional 5,10-methylene-tetrahydrofolate dehyd 90.64
PRK06436303 glycerate dehydrogenase; Provisional 90.47
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 90.37
PRK12921305 2-dehydropantoate 2-reductase; Provisional 90.31
PRK15409323 bifunctional glyoxylate/hydroxypyruvate reductase 90.26
PLN02819 1042 lysine-ketoglutarate reductase/saccharopine dehydr 90.21
PRK05597355 molybdopterin biosynthesis protein MoeB; Validated 90.18
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 90.13
PRK07679279 pyrroline-5-carboxylate reductase; Reviewed 90.02
COG0345266 ProC Pyrroline-5-carboxylate reductase [Amino acid 89.9
PRK14180282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 89.86
PLN02616364 tetrahydrofolate dehydrogenase/cyclohydrolase, put 89.61
COG1052324 LdhA Lactate dehydrogenase and related dehydrogena 89.43
PRK08291330 ectoine utilization protein EutC; Validated 89.3
PRK08328231 hypothetical protein; Provisional 89.28
PRK14173287 bifunctional 5,10-methylene-tetrahydrofolate dehyd 89.22
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 89.09
PRK07634245 pyrroline-5-carboxylate reductase; Reviewed 89.07
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 88.95
KOG0069|consensus336 88.8
PRK11880267 pyrroline-5-carboxylate reductase; Reviewed 88.63
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 88.55
cd00650263 LDH_MDH_like NAD-dependent, lactate dehydrogenase- 88.17
PRK14186297 bifunctional 5,10-methylene-tetrahydrofolate dehyd 88.14
TIGR01915219 npdG NADPH-dependent F420 reductase. This model re 88.11
TIGR02355240 moeB molybdopterin synthase sulfurylase MoeB. This 87.81
PTZ00325321 malate dehydrogenase; Provisional 87.79
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 87.67
PRK00094325 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr 87.62
cd00757228 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 87.6
PLN02897345 tetrahydrofolate dehydrogenase/cyclohydrolase, put 87.51
PTZ00082321 L-lactate dehydrogenase; Provisional 87.51
PF00056141 Ldh_1_N: lactate/malate dehydrogenase, NAD binding 87.42
PRK01713334 ornithine carbamoyltransferase; Provisional 87.38
PRK06928277 pyrroline-5-carboxylate reductase; Reviewed 87.37
PRK06129308 3-hydroxyacyl-CoA dehydrogenase; Validated 87.05
cd01485198 E1-1_like Ubiquitin activating enzyme (E1), repeat 86.82
TIGR00658304 orni_carb_tr ornithine carbamoyltransferase. Most 86.66
cd05297423 GH4_alpha_glucosidase_galactosidase Glycoside Hydr 86.61
PRK05690245 molybdopterin biosynthesis protein MoeB; Provision 86.33
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 86.23
PF03446163 NAD_binding_2: NAD binding domain of 6-phosphogluc 86.0
PRK07502307 cyclohexadienyl dehydrogenase; Validated 85.92
PRK13403335 ketol-acid reductoisomerase; Provisional 85.83
cd01492197 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit 85.8
cd00755231 YgdL_like Family of activating enzymes (E1) of ubi 85.67
PRK06407301 ornithine cyclodeaminase; Provisional 85.66
TIGR01381664 E1_like_apg7 E1-like protein-activating enzyme Gsa 85.56
PRK12439341 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 85.52
COG0190283 FolD 5,10-methylene-tetrahydrofolate dehydrogenase 85.51
TIGR03366280 HpnZ_proposed putative phosphonate catabolism asso 85.4
PF07992201 Pyr_redox_2: Pyridine nucleotide-disulphide oxidor 85.35
PRK14851679 hypothetical protein; Provisional 85.25
PTZ00345365 glycerol-3-phosphate dehydrogenase; Provisional 85.13
TIGR01772312 MDH_euk_gproteo malate dehydrogenase, NAD-dependen 85.06
TIGR01763305 MalateDH_bact malate dehydrogenase, NAD-dependent. 84.92
cd05291306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 84.92
cd01483143 E1_enzyme_family Superfamily of activating enzymes 84.88
PRK09880343 L-idonate 5-dehydrogenase; Provisional 84.85
PRK05086312 malate dehydrogenase; Provisional 84.84
PRK12562334 ornithine carbamoyltransferase subunit F; Provisio 84.41
PRK06476258 pyrroline-5-carboxylate reductase; Reviewed 84.24
KOG0685|consensus498 84.03
KOG0029|consensus501 84.03
PRK06141314 ornithine cyclodeaminase; Validated 84.0
PRK15116268 sulfur acceptor protein CsdL; Provisional 83.88
PRK00779304 ornithine carbamoyltransferase; Provisional 83.88
cd01337310 MDH_glyoxysomal_mitochondrial Glyoxysomal and mito 83.87
PF01494356 FAD_binding_3: FAD binding domain; InterPro: IPR00 83.76
PRK09310477 aroDE bifunctional 3-dehydroquinate dehydratase/sh 83.61
TIGR00872298 gnd_rel 6-phosphogluconate dehydrogenase (decarbox 83.6
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 82.89
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 82.58
cd00704323 MDH Malate dehydrogenase. Malate dehydrogenase (MD 82.22
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 82.09
cd01339300 LDH-like_MDH L-lactate dehydrogenase-like malate d 81.9
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 81.85
PRK08229341 2-dehydropantoate 2-reductase; Provisional 81.84
TIGR02371325 ala_DH_arch alanine dehydrogenase, Archaeoglobus f 81.77
TIGR02279503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 81.69
PRK07340304 ornithine cyclodeaminase; Validated 81.69
cd05296419 GH4_P_beta_glucosidase Glycoside Hydrolases Family 81.41
KOG2337|consensus669 81.28
PRK00856305 pyrB aspartate carbamoyltransferase catalytic subu 81.14
PLN02342348 ornithine carbamoyltransferase 81.12
PRK06153393 hypothetical protein; Provisional 80.75
PRK12491272 pyrroline-5-carboxylate reductase; Reviewed 80.68
PRK06823315 ornithine cyclodeaminase; Validated 80.67
COG0240329 GpsA Glycerol-3-phosphate dehydrogenase [Energy pr 80.59
PF07991165 IlvN: Acetohydroxy acid isomeroreductase, catalyti 80.46
COG0565242 LasT rRNA methylase [Translation, ribosomal struct 80.46
PRK03515336 ornithine carbamoyltransferase subunit I; Provisio 80.15
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=3.4e-205  Score=1773.20  Aligned_cols=751  Identities=60%  Similarity=0.975  Sum_probs=732.0

Q ss_pred             hHHHHHHhhccCCCCCcEEEeeccccCCccccceeeccchHHHHHHHhcCcccccccccCCcEEEEEecccccccCCCCC
Q psy14495         11 KSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIG   90 (766)
Q Consensus        11 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~i~YtP~v~~~c~~i~~~p~~~~~~~~~~~~v~vvtdG~~iLGlGd~G   90 (766)
                      ++++++|+||+++.+|||++.||+|++|++||+++|||||+++|++|++||+++|+||+|||.++|||||||||||||+|
T Consensus         2 ~~~~~~l~~h~~~~~gk~~~~~~~~~~~~~dl~~~Ytpgv~~~c~~i~~~~~~~~~~t~~~n~v~vvtdg~~vLGlGd~G   81 (752)
T PRK07232          2 QLKQAALDYHRFPRPGKIEVTPTKPLATQRDLSLAYSPGVAAPCLEIAKDPADAYKYTARGNLVAVISNGTAVLGLGNIG   81 (752)
T ss_pred             chHHHHHHHhcccCCCeEEEEeccccCChhhcceecCCchHHHHHHHHhChhhccccccCCcEEEEEccchhhccccccc
Confidence            45789999999966899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccchhhhHHHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC
Q psy14495         91 PLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ  170 (766)
Q Consensus        91 ~~~~~~i~~gK~~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~  170 (766)
                      ++|||||||||++|||+|||||++|||||++|+||||++++.+||+||+||||||++||||+||+|||++++||||||||
T Consensus        82 ~~a~~pv~egK~~l~~~~~gid~~~i~~~~~d~de~v~~v~~~~p~~g~i~~ED~~~p~~f~i~~~~~~~~~ip~f~DD~  161 (752)
T PRK07232         82 ALASKPVMEGKGVLFKKFAGIDVFDIEVDEEDPDKFIEAVAALEPTFGGINLEDIKAPECFYIEEKLRERMDIPVFHDDQ  161 (752)
T ss_pred             cccCccHHHHHHHHHHhhcCCCccccccCCCCHHHHHHHHHHhCCCccEEeeeecCCchHHHHHHHHHHhcCCCeecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc
Q psy14495        171 HGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD  250 (766)
Q Consensus       171 qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~  250 (766)
                      ||||+|+||||+||+|++|++|+|+||||+|||+||+||++||...|++++||||||++|||+++|.++|+++|++||++
T Consensus       162 ~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~~~~~k~~~a~~  241 (752)
T PRK07232        162 HGTAIISAAALLNALELVGKKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSKGVIYKGRTEGMDEWKAAYAVD  241 (752)
T ss_pred             chHHHHHHHHHHHHHHHhCCChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEEcCCCeecCCCcccccHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999998999999999999999966799999999999


Q ss_pred             cCCCCHHHHhccCcEEEecCCCCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhcccCcEEEEcCCCCCcccccccccc
Q psy14495        251 TTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCF  330 (766)
Q Consensus       251 ~~~~~L~e~i~~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~~~~~ai~atG~~~~p~Q~NN~~~F  330 (766)
                      ++..+|+|+|++||||||+|++|+||+|||++|+++||||||||||||||||||++|++.+||||||++||||+||+|+|
T Consensus       242 ~~~~~l~~~i~~~~v~iG~s~~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~~~~~~i~atGrs~~pnQ~NN~~~F  321 (752)
T PRK07232        242 TDARTLAEAIEGADVFLGLSAAGVLTPEMVKSMADNPIIFALANPDPEITPEEAKAVRPDAIIATGRSDYPNQVNNVLCF  321 (752)
T ss_pred             CCCCCHHHHHcCCCEEEEcCCCCCCCHHHHHHhccCCEEEecCCCCccCCHHHHHHhcCCEEEEECCcCCCCcccceeec
Confidence            99999999999999999999999999999999999999999999999999999999975599999999999999999999


Q ss_pred             cchhhhhhcccCCcCCHHHHHHHHHHHHhccccccchhhhhhhcccccCCCccccCCCCCChhhHhHHHHHHHHHHHHcC
Q psy14495        331 PYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSG  410 (766)
Q Consensus       331 Pgi~~g~l~~~a~~i~~~m~~aAa~aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~~~vs~~IA~aVa~~a~~~g  410 (766)
                      ||||||+|+++|++|||+|+++||++||++++++.|+.+..+|+.+...++++||+|++||+|+...||.+|+++|+++|
T Consensus       322 Pgi~~g~l~~~a~~i~~~m~~aaa~ala~~~~~~~~~~~~~~~~~~~~~~~~~~iip~~~~~~~~~~va~av~~~a~~~g  401 (752)
T PRK07232        322 PYIFRGALDVGATTINEEMKLAAVRAIAELAREEVSDEVAAAYGGQKLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMDSG  401 (752)
T ss_pred             chhhHHHHHcCCccCCHHHHHHHHHHHHhhcccccchhhhhhhccccccCCCCccCCCCCChhHHHHHHHHHHHHHHhhC
Confidence            99999999999999999999999999999999988888999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHhhhhhhccccccchHHHHHHhhhccccEEEEecCCCHHHHHHHHHHHHcCCcEEEEEcCHHHHHH
Q psy14495        411 VATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQ  490 (766)
Q Consensus       411 vA~~~~~d~~~~~~~~~~~~~~s~~~m~~L~~~ak~~~~~~krIv~~e~~d~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~  490 (766)
                      +|+.+++|+++|.+++++++++++.+|+++++++|+.+   +||+|+||+|+++|+|+.++.++|+++|||||++++|++
T Consensus       402 ~a~~~~~~~~~~~~~~~~~~~~~~~~m~~Li~~ak~~~---krIvfaegeD~rvL~Aa~~~~~egia~pILVGd~e~I~~  478 (752)
T PRK07232        402 VATRPIADMDAYREKLEAFVYKTGLVMKPIFAKAKKDP---KRVVFAEGEEERVLRAAQEVVDEGLAKPILIGRPEVIEA  478 (752)
T ss_pred             cccCCCCCHHHHHHHHHHHHhhhhhHHHHHHHHhhccC---CeEEEecCCCHHHHHHHHHHHHcCCeEEEEEcCHHHHHH
Confidence            99998889999999999999999999999999999987   899999999999999999999999999999999999999


Q ss_pred             HHHhcCcCCCCCCCeEEECCCCCcchhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChH
Q psy14495        491 HIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTK  570 (766)
Q Consensus       491 ~~~~~~l~l~~~~~~eIid~~~~~~~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~  570 (766)
                      .+++.+++++.+.+++|||++++..|++|++.|+++|++||+++++|++.++++|+++|++||++|+||++|||.++||+
T Consensus       479 ~l~~~gl~l~~~~~ieIIda~~~~~~~~y~~~~~~lr~rKG~t~~~A~r~~~~~s~~~Aa~mVk~GeADalVsG~~gtT~  558 (752)
T PRK07232        479 RIKKLGLDLKAGVDFEIVNPEDDPRYEEYWQYYYELLQRKGVTPEDARRLVRRDRTVIGAMMVARGDADAMICGLTGRYH  558 (752)
T ss_pred             HHHHcCCCcccCCCeEEECCCCchhHHHHHHHHHHHHhhcCCCHHHHHHHhccCcHHHHHHHHHCCCCCEEEecCCCCHH
Confidence            99999987632237999999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCccceeEEEEEEeCCCeEEEEeccccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeeCccCCCCC
Q psy14495        571 LHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNN  650 (766)
Q Consensus       571 ~~l~~~~~iig~~~g~~~~s~~~i~~~~~~~~~l~D~g~Ni~P~~e~L~~ia~~aa~~a~~lGi~PkVAlLS~s~~gs~~  650 (766)
                      ++|+.+++++|++||++++|++++||++++.++|+|||+|++||++||++||+|++.++|.||++|||||||+||+||++
T Consensus       559 a~Lraa~~iiG~~~Gi~r~S~~~im~~~~~~l~~aD~GvNi~PtaeqLa~IA~~aa~~ar~lGiePRVALLS~Sn~Gse~  638 (752)
T PRK07232        559 EHLRPVRQVIGLRPGVHTAAAMNALLLKGGNLFIADTYVNEDPTAEELAEIALMAAEEVRRFGIEPRVALLSHSNFGSSD  638 (752)
T ss_pred             HHHHHHHHHhCcCCCCceeEEEEEEEcCCCCEEEEeCeecCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEeccccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcchHHHHHHHHHHHccCCCceEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccc
Q psy14495        651 NISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIG  730 (766)
Q Consensus       651 ~~~~~~vreA~~llk~~~~~~~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G  730 (766)
                      +|++++++||+++++++.++|+||||+|+|+|++++++++|+|+|+++|+||||||||+++|||+||++++ |+++..+|
T Consensus       639 ~k~~~~vreA~~llk~~~~~l~~dGemq~D~Al~~~va~~K~p~s~vaG~ANVLIfPdLeaGNI~yKllq~-l~g~~aiG  717 (752)
T PRK07232        639 SPSARKMREAVELLRERAPDLEVDGEMHGDAALNEEIRKDLYPFSRLKGPANVLVMPNLEAANISYNLLKE-LGGGVTIG  717 (752)
T ss_pred             CCcHHHHHHHHHHHHhhCCCcEEEEechHHHhCCHHHHHhhCCCCccCCcCCEEEeCCchhhHHHHHHHHH-hcCCeEec
Confidence            99999999999999988899999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             cccccCCccEEecCCCCCHHHHHHHHHHHHHHHhc
Q psy14495        731 PILLGCSKPIHILTSSATVRRIVNMTALCVIDALS  765 (766)
Q Consensus       731 ~iLlGl~~PVv~~sr~~s~~~i~n~ialA~~~a~~  765 (766)
                      |+|+|+++||+++||+||+++|+|++++|++++|.
T Consensus       718 piL~G~~~PV~~lSR~~s~~di~n~~Ala~~~a~~  752 (752)
T PRK07232        718 PILLGMAKPVHILTPSATVRRIVNMTALAVVDAQT  752 (752)
T ss_pred             ceeecCCCCeEECCCCCCHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999863

>PRK12861 malic enzyme; Reviewed Back     alignment and domain information
>PRK12862 malic enzyme; Reviewed Back     alignment and domain information
>COG0281 SfcA Malic enzyme [Energy production and conversion] Back     alignment and domain information
>PRK13529 malate dehydrogenase; Provisional Back     alignment and domain information
>PLN03129 NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>PTZ00317 NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>KOG1257|consensus Back     alignment and domain information
>COG0280 Pta Phosphotransacetylase [Energy production and conversion] Back     alignment and domain information
>PRK09653 eutD phosphotransacetylase; Reviewed Back     alignment and domain information
>PF01515 PTA_PTB: Phosphate acetyl/butaryl transferase; InterPro: IPR002505 This entry contains both phosphate acetyltransferase 2 Back     alignment and domain information
>TIGR00651 pta phosphate acetyltransferase Back     alignment and domain information
>PRK05632 phosphate acetyltransferase; Reviewed Back     alignment and domain information
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1 Back     alignment and domain information
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e Back     alignment and domain information
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme Back     alignment and domain information
>PRK11890 phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK05805 phosphate butyryltransferase; Validated Back     alignment and domain information
>PRK07742 phosphate butyryltransferase; Validated Back     alignment and domain information
>TIGR02706 P_butyryltrans phosphate butyryltransferase Back     alignment and domain information
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated Back     alignment and domain information
>TIGR02709 branched_ptb branched-chain phosphotransacylase Back     alignment and domain information
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>PRK05331 putative phosphate acyltransferase; Provisional Back     alignment and domain information
>TIGR00182 plsX fatty acid/phospholipid synthesis protein PlsX Back     alignment and domain information
>COG0416 PlsX Fatty acid/phospholipid biosynthesis enzyme [Lipid metabolism] Back     alignment and domain information
>PRK13846 putative glycerol-3-phosphate acyltransferase PlsX; Provisional Back     alignment and domain information
>PRK13845 putative glycerol-3-phosphate acyltransferase PlsX; Provisional Back     alignment and domain information
>PF02504 FA_synthesis: Fatty acid synthesis protein; InterPro: IPR003664 The plsX gene is part of the bacterial fab gene cluster which encodes several key fatty acid biosynthetic enzymes [] Back     alignment and domain information
>PF00390 malic: Malic enzyme, N-terminal domain; InterPro: IPR012301 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e Back     alignment and domain information
>TIGR03270 methan_mark_4 putative methanogen marker protein 4 Back     alignment and domain information
>COG4002 Predicted phosphotransacetylase [General function prediction only] Back     alignment and domain information
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information
>PRK03743 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK01909 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK02746 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK05312 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR00557 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase Back     alignment and domain information
>PF04166 PdxA: Pyridoxal phosphate biosynthetic protein PdxA; InterPro: IPR005255 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal) Back     alignment and domain information
>PRK03371 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 2; Provisional Back     alignment and domain information
>PRK00232 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK03946 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>COG1995 PdxA Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism] Back     alignment and domain information
>PLN02494 adenosylhomocysteinase Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 Back     alignment and domain information
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 Back     alignment and domain information
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR01035 hemA glutamyl-tRNA reductase Back     alignment and domain information
>PTZ00075 Adenosylhomocysteinase; Provisional Back     alignment and domain information
>PRK14030 glutamate dehydrogenase; Provisional Back     alignment and domain information
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed Back     alignment and domain information
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PLN02477 glutamate dehydrogenase Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional Back     alignment and domain information
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] Back     alignment and domain information
>PLN00203 glutamyl-tRNA reductase Back     alignment and domain information
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain Back     alignment and domain information
>PRK09414 glutamate dehydrogenase; Provisional Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type Back     alignment and domain information
>PRK12549 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>PRK14031 glutamate dehydrogenase; Provisional Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>PLN02928 oxidoreductase family protein Back     alignment and domain information
>PRK12548 shikimate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK14982 acyl-ACP reductase; Provisional Back     alignment and domain information
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related Back     alignment and domain information
>PRK13940 glutamyl-tRNA reductase; Provisional Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related Back     alignment and domain information
>PRK07574 formate dehydrogenase; Provisional Back     alignment and domain information
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>PRK00676 hemA glutamyl-tRNA reductase; Validated Back     alignment and domain information
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional Back     alignment and domain information
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK12550 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>PLN00106 malate dehydrogenase Back     alignment and domain information
>PRK08605 D-lactate dehydrogenase; Validated Back     alignment and domain information
>PRK13243 glyoxylate reductase; Reviewed Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) Back     alignment and domain information
>PRK12480 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PLN03139 formate dehydrogenase; Provisional Back     alignment and domain information
>PRK12749 quinate/shikimate dehydrogenase; Reviewed Back     alignment and domain information
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional Back     alignment and domain information
>PRK08410 2-hydroxyacid dehydrogenase; Provisional Back     alignment and domain information
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR00507 aroE shikimate 5-dehydrogenase Back     alignment and domain information
>PLN02306 hydroxypyruvate reductase Back     alignment and domain information
>PRK14027 quinate/shikimate dehydrogenase; Provisional Back     alignment and domain information
>PTZ00117 malate dehydrogenase; Provisional Back     alignment and domain information
>PLN02527 aspartate carbamoyltransferase Back     alignment and domain information
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) Back     alignment and domain information
>PRK06487 glycerate dehydrogenase; Provisional Back     alignment and domain information
>TIGR02992 ectoine_eutC ectoine utilization protein EutC Back     alignment and domain information
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional Back     alignment and domain information
>PRK07680 late competence protein ComER; Validated Back     alignment and domain information
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] Back     alignment and domain information
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05600 thiamine biosynthesis protein ThiF; Validated Back     alignment and domain information
>PRK06932 glycerate dehydrogenase; Provisional Back     alignment and domain information
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional Back     alignment and domain information
>PRK08223 hypothetical protein; Validated Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase Back     alignment and domain information
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase Back     alignment and domain information
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK06223 malate dehydrogenase; Reviewed Back     alignment and domain information
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PLN02688 pyrroline-5-carboxylate reductase Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK06436 glycerate dehydrogenase; Provisional Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional Back     alignment and domain information
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase Back     alignment and domain information
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative Back     alignment and domain information
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>PRK08291 ectoine utilization protein EutC; Validated Back     alignment and domain information
>PRK08328 hypothetical protein; Provisional Back     alignment and domain information
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>KOG0069|consensus Back     alignment and domain information
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family Back     alignment and domain information
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR01915 npdG NADPH-dependent F420 reductase Back     alignment and domain information
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB Back     alignment and domain information
>PTZ00325 malate dehydrogenase; Provisional Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA Back     alignment and domain information
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] Back     alignment and domain information
>PRK01713 ornithine carbamoyltransferase; Provisional Back     alignment and domain information
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like Back     alignment and domain information
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase Back     alignment and domain information
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases Back     alignment and domain information
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 Back     alignment and domain information
>PRK07502 cyclohexadienyl dehydrogenase; Validated Back     alignment and domain information
>PRK13403 ketol-acid reductoisomerase; Provisional Back     alignment and domain information
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 Back     alignment and domain information
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E Back     alignment and domain information
>PRK06407 ornithine cyclodeaminase; Provisional Back     alignment and domain information
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p Back     alignment and domain information
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase Back     alignment and domain information
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK14851 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent Back     alignment and domain information
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>PRK09880 L-idonate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK05086 malate dehydrogenase; Provisional Back     alignment and domain information
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional Back     alignment and domain information
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>KOG0685|consensus Back     alignment and domain information
>KOG0029|consensus Back     alignment and domain information
>PRK06141 ornithine cyclodeaminase; Validated Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>PRK00779 ornithine carbamoyltransferase; Provisional Back     alignment and domain information
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases Back     alignment and domain information
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways Back     alignment and domain information
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed Back     alignment and domain information
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>cd00704 MDH Malate dehydrogenase Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>PRK08229 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>PRK07340 ornithine cyclodeaminase; Validated Back     alignment and domain information
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase Back     alignment and domain information
>KOG2337|consensus Back     alignment and domain information
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional Back     alignment and domain information
>PLN02342 ornithine carbamoyltransferase Back     alignment and domain information
>PRK06153 hypothetical protein; Provisional Back     alignment and domain information
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK06823 ornithine cyclodeaminase; Validated Back     alignment and domain information
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates Back     alignment and domain information
>COG0565 LasT rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query766
2dvm_A439 Nad Complex Structure Of Ph1275 Protein From Pyroco 1e-80
1ww8_A439 Crystal Structure Of Malic Enzyme From Pyrococcus H 7e-76
2a9f_A398 Crystal Structure Of A Putative Malic Enzyme ((S)- 9e-75
2hae_A386 Crystal Structure Of A Putative Malic Enzyme (Malat 1e-67
1vl6_A388 Crystal Structure Of Nad-Dependent Malic Enzyme (Tm 5e-64
3nv9_A487 Crystal Structure Of Entamoeba Histolytica Malic En 6e-50
1td9_A329 Crystal Structure Of A Phosphotransacetylase From B 1e-30
4e4r_A331 Eutd Phosphotransacetylase From Staphylococcus Aure 9e-29
1r5j_A337 Crystal Structure Of A Phosphotransacetylase From S 1e-24
1vmi_A355 Crystal Structure Of Putative Phosphate Acetyltrans 6e-20
1qzt_A333 Phosphotransacetylase From Methanosarcina Thermophi 3e-18
2af4_C333 Phosphotransacetylase From Methanosarcina Thermophi 3e-18
1gq2_A555 Malic Enzyme From Pigeon Liver Length = 555 2e-05
2aw5_A575 Crystal Structure Of A Human Malic Enzyme Length = 1e-04
3tng_A291 The Crystal Structure Of A Possible Phosphate Acety 2e-04
>pdb|2DVM|A Chain A, Nad Complex Structure Of Ph1275 Protein From Pyrococcus Horikoshii Length = 439 Back     alignment and structure 
Iteration: 1

 Score =  298 bits (762), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 178/436 (40%), Positives = 252/436 (57%), Gaps = 40/436 (9%)
Query: 13  HQSALEYHE--FPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTK 70
            + ALE+H+  FP  GKI VIP   L ++++L LAY+PGVA  C+EI  +   V++YT+K
Sbjct: 3   REKALEFHKNNFPGNGKIEVIPKVSLESREELTLAYTPGVAEPCKEIARDPGKVYEYTSK 62
Query: 71  GNLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDII 130
           GNLVAV+++G+ +LG+GNIGPLA  PVMEGKA+LFK+F G+D F + I E +P+K  DI+
Sbjct: 63  GNLVAVVSDGSRILGLGNIGPLAGLPVMEGKALLFKRFGGVDAFPIMIKEQEPNKFIDIV 122
Query: 131 FSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGXXXXXX 190
            ++ PTFGGINLEDI +P+CFYI ++LR  + IPVFHDDQ GTA +V + +LN       
Sbjct: 123 KAIAPTFGGINLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGK 182
Query: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXGFPLQNIFVTDLAGVLYKGRSELMDSN------- 243
                                     G   +N+ V +L      G+  ++ S+       
Sbjct: 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELV----NGKPRILTSDLDLEKLF 238
Query: 244 --KARFIKDTTARTLS----DIIPNADIFLGLSV--SGVLKKEMVLQMAKNPIILALANP 295
             +   +K T    +     + + +AD+ +  +    GV+K + + +M ++ I+  LANP
Sbjct: 239 PYRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANP 298
Query: 296 LPEILPEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVH 355
           +PEILPE+ K      I+ATGRSDYPNQ+NN+L FP IFRGALD  A TIT  M IAA  
Sbjct: 299 VPEILPEEAKKA-GARIVATGRSDYPNQINNLLGFPGIFRGALDVRARTITDSMIIAAAK 357
Query: 356 AIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKP 415
           AIA + + E S+               E IIP P +P +  + A AVA  A K GVA   
Sbjct: 358 AIASIVE-EPSE---------------ENIIPSPLNPIVYAREARAVAEEAMKEGVARTK 401
Query: 416 IKD--IEIYTNHLQKF 429
           +K   +E +T  L +F
Sbjct: 402 VKGEWVEEHTIRLIEF 417
>pdb|1WW8|A Chain A, Crystal Structure Of Malic Enzyme From Pyrococcus Horikoshii Ot3 Length = 439 Back     alignment and structure
>pdb|2A9F|A Chain A, Crystal Structure Of A Putative Malic Enzyme ((S)- Malate:nad+ Oxidoreductase (Decarboxylating)) Length = 398 Back     alignment and structure
>pdb|2HAE|A Chain A, Crystal Structure Of A Putative Malic Enzyme (Malate Oxidoreductase) Length = 386 Back     alignment and structure
>pdb|1VL6|A Chain A, Crystal Structure Of Nad-Dependent Malic Enzyme (Tm0542) From Thermotoga Maritima At 2.61 A Resolution Length = 388 Back     alignment and structure
>pdb|3NV9|A Chain A, Crystal Structure Of Entamoeba Histolytica Malic Enzyme Length = 487 Back     alignment and structure
>pdb|1TD9|A Chain A, Crystal Structure Of A Phosphotransacetylase From Bacillus Subtilis Length = 329 Back     alignment and structure
>pdb|4E4R|A Chain A, Eutd Phosphotransacetylase From Staphylococcus Aureus Length = 331 Back     alignment and structure
>pdb|1R5J|A Chain A, Crystal Structure Of A Phosphotransacetylase From Streptococcus Pyogenes Length = 337 Back     alignment and structure
>pdb|1VMI|A Chain A, Crystal Structure Of Putative Phosphate Acetyltransferase (Np_416953.1) From Escherichia Coli K12 At 2.32 A Resolution Length = 355 Back     alignment and structure
>pdb|1QZT|A Chain A, Phosphotransacetylase From Methanosarcina Thermophila Length = 333 Back     alignment and structure
>pdb|2AF4|C Chain C, Phosphotransacetylase From Methanosarcina Thermophila Co- Crystallized With Coenzyme A Length = 333 Back     alignment and structure
>pdb|1GQ2|A Chain A, Malic Enzyme From Pigeon Liver Length = 555 Back     alignment and structure
>pdb|2AW5|A Chain A, Crystal Structure Of A Human Malic Enzyme Length = 575 Back     alignment and structure
>pdb|3TNG|A Chain A, The Crystal Structure Of A Possible Phosphate AcetylBUTARYL Transferase From Listeria Monocytogenes Egd-E. Length = 291 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query766
2dvm_A439 Malic enzyme, 439AA long hypothetical malate oxido 0.0
3nv9_A487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 0.0
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 0.0
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 0.0
1td9_A329 Phosphate acetyltransferase; structural genomics, 2e-91
1r5j_A337 Putative phosphotransacetylase; lactate dehydrogen 2e-88
1vmi_A355 Putative phosphate acetyltransferase; NP_416953.1, 1e-86
2af4_C333 Phosphate acetyltransferase; PTA dimer with one CO 3e-86
4e4r_A331 Phosphate acetyltransferase; structural genomics, 3e-85
1gq2_A555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 1e-82
1pj3_A564 NAD-dependent malic enzyme, mitochondrial; oxidati 2e-80
1o0s_A605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 5e-80
3uf6_A291 LMO1369 protein; structural genomics, the center f 2e-34
1yco_A279 Branched-chain phosphotransacylase; structural gen 8e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Length = 439 Back     alignment and structure
 Score =  715 bits (1847), Expect = 0.0
 Identities = 191/457 (41%), Positives = 272/457 (59%), Gaps = 34/457 (7%)

Query: 14  QSALEYHE--FPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKG 71
           + ALE+H+  FP  GKI VIP   L ++++L LAY+PGVA  C+EI  +   V++YT+KG
Sbjct: 4   EKALEFHKNNFPGNGKIEVIPKVSLESREELTLAYTPGVAEPCKEIARDPGKVYEYTSKG 63

Query: 72  NLVAVITNGTAVLGMGNIGPLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIF 131
           NLVAV+++G+ +LG+GNIGPLA  PVMEGKA+LFK+F G+D F + I E +P+K  DI+ 
Sbjct: 64  NLVAVVSDGSRILGLGNIGPLAGLPVMEGKALLFKRFGGVDAFPIMIKEQEPNKFIDIVK 123

Query: 132 SLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKK 191
           ++ PTFGGINLEDI +P+CFYI ++LR  + IPVFHDDQ GTA +V + +LN LK+V KK
Sbjct: 124 AIAPTFGGINLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKK 183

Query: 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKG-----RSELMDSNKAR 246
           + +  L + GAGAA  A L ++ + G   +N+ V +L     +        E +   +  
Sbjct: 184 ISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGW 243

Query: 247 FIKDTTAR----TLSDIIPNADIFLGLSVS--GVLKKEMVLQMAKNPIILALANPLPEIL 300
            +K T          + + +AD+ +  +    GV+K + + +M ++ I+  LANP+PEIL
Sbjct: 244 LLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEIL 303

Query: 301 PEDIKSVRNDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADL 360
           PE+ K      I+ATGRSDYPNQ+NN+L FP IFRGALD  A TIT  M IAA  AIA +
Sbjct: 304 PEEAKKAG-ARIVATGRSDYPNQINNLLGFPGIFRGALDVRARTITDSMIIAAAKAIASI 362

Query: 361 AQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAEKSGVATKPIKDIE 420
            +                    E IIP P +P +  + A AVA  A K GVA   +K   
Sbjct: 363 VE----------------EPSEENIIPSPLNPIVYAREARAVAEEAMKEGVARTKVKGEW 406

Query: 421 IYTNHLQKFVYRSSAFMNPIFQIAKKARKNIKRIIYS 457
           +   H  + +      + PI +   K R+  K I  +
Sbjct: 407 VE-EHTIRLIEFYENVIAPINK---KRREYSKAITRA 439
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Length = 487 Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Length = 398 Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Length = 388 Back     alignment and structure
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A Length = 329 Back     alignment and structure
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5 Length = 337 Back     alignment and structure
>1vmi_A Putative phosphate acetyltransferase; NP_416953.1, structura genomics, JCSG, protein structure initiative, PSI, joint CE structural genomics; 2.32A {Escherichia coli} SCOP: c.77.1.5 Length = 355 Back     alignment and structure
>2af4_C Phosphate acetyltransferase; PTA dimer with one COA ligand bound PER monomer, acyltransferase; HET: COA; 2.15A {Methanosarcina thermophila} SCOP: c.77.1.5 PDB: 1qzt_A* 2af3_C* Length = 333 Back     alignment and structure
>4e4r_A Phosphate acetyltransferase; structural genomics, EUTD, center for structural genomics of infectious diseases, csgid; HET: TRS; 1.44A {Staphylococcus aureus subsp} Length = 331 Back     alignment and structure
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Length = 555 Back     alignment and structure
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Length = 564 Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Length = 605 Back     alignment and structure
>3uf6_A LMO1369 protein; structural genomics, the center for structural genomics of I diseases, csgid, unknown function, transferase; HET: COD; 1.80A {Listeria monocytogenes} PDB: 3tng_A* 3u9e_A* Length = 291 Back     alignment and structure
>1yco_A Branched-chain phosphotransacylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.40A {Enterococcus faecalis} Length = 279 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query766
3nv9_A487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 100.0
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 100.0
1gq2_A555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 100.0
1pj3_A564 NAD-dependent malic enzyme, mitochondrial; oxidati 100.0
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 100.0
1o0s_A605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 100.0
2dvm_A439 Malic enzyme, 439AA long hypothetical malate oxido 100.0
4e4r_A331 Phosphate acetyltransferase; structural genomics, 100.0
2af4_C333 Phosphate acetyltransferase; PTA dimer with one CO 100.0
1vmi_A355 Putative phosphate acetyltransferase; NP_416953.1, 100.0
1td9_A329 Phosphate acetyltransferase; structural genomics, 100.0
1r5j_A337 Putative phosphotransacetylase; lactate dehydrogen 100.0
3uf6_A291 LMO1369 protein; structural genomics, the center f 100.0
1yco_A279 Branched-chain phosphotransacylase; structural gen 100.0
1vi1_A345 Fatty acid/phospholipid synthesis protein PLSX; st 100.0
1u7n_A336 Fatty acid/phospholipid synthesis protein PLSX; st 100.0
3lxy_A334 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA 99.75
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 99.24
3h9u_A436 Adenosylhomocysteinase; NAD CO-factor complex, str 99.03
3gvp_A435 Adenosylhomocysteinase 3; protein CO-factor comple 99.0
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 98.63
3ond_A488 Adenosylhomocysteinase; plant protein, enzyme-subs 98.55
1yxo_A328 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA 98.44
4aty_A349 Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; o 98.34
2hi1_A330 4-hydroxythreonine-4-phosphate dehydrogenase 2; py 98.28
3n58_A464 Adenosylhomocysteinase; ssgcid, hydrolase, structu 98.18
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 97.88
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 97.74
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 97.61
3tsn_A367 4-hydroxythreonine-4-phosphate dehydrogenase; stru 97.45
2rir_A300 Dipicolinate synthase, A chain; structural genomic 97.14
1nvt_A287 Shikimate 5'-dehydrogenase; structural genomics, P 97.02
3r3j_A456 Glutamate dehydrogenase; rossman fold, oxidoreduct 96.99
1v8b_A479 Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 96.96
1a4i_A301 Methylenetetrahydrofolate dehydrogenase / methenyl 96.82
3l07_A285 Bifunctional protein fold; structural genomics, ID 96.74
4a26_A300 Putative C-1-tetrahydrofolate synthase, cytoplasm; 96.7
3d64_A494 Adenosylhomocysteinase; structural genomics, ssgci 96.69
2bma_A470 Glutamate dehydrogenase (NADP+); malaria, drug des 96.67
4fcc_A450 Glutamate dehydrogenase; protein complex, rossmann 96.61
3p2o_A285 Bifunctional protein fold; structural genomics, ce 96.56
3pwz_A272 Shikimate dehydrogenase 3; alpha-beta, oxidoreduct 96.53
3k92_A424 NAD-GDH, NAD-specific glutamate dehydrogenase; ROC 96.53
2o4c_A380 Erythronate-4-phosphate dehydrogenase; erythronate 96.5
4a5o_A286 Bifunctional protein fold; oxidoreductase, hydrola 96.49
3aoe_E419 Glutamate dehydrogenase; rossmann fold, NADH, oxid 96.47
3o8q_A281 Shikimate 5-dehydrogenase I alpha; structural geno 96.43
3ngx_A276 Bifunctional protein fold; methylenetetrahydrofola 96.42
1b0a_A288 Protein (fold bifunctional protein); folate, dehyd 96.4
3don_A277 Shikimate dehydrogenase; alpha-beta structure, ros 96.38
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 96.35
2d5c_A263 AROE, shikimate 5-dehydrogenase; substrate, dimer, 96.28
3fbt_A282 Chorismate mutase and shikimate 5-dehydrogenase fu 96.25
1edz_A320 5,10-methylenetetrahydrofolate dehydrogenase; nucl 96.07
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 96.01
3tum_A269 Shikimate dehydrogenase family protein; rossmann-f 95.89
1v9l_A421 Glutamate dehydrogenase; protein-NAD complex, oxid 95.88
3oet_A381 Erythronate-4-phosphate dehydrogenase; structural 95.85
1c1d_A355 L-phenylalanine dehydrogenase; amino acid dehydrog 95.8
3jyo_A283 Quinate/shikimate dehydrogenase; enzyme-cofactor c 95.75
2c2x_A281 Methylenetetrahydrofolate dehydrogenase- methenylt 95.73
3k5p_A416 D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, 95.72
2gcg_A330 Glyoxylate reductase/hydroxypyruvate reductase; NA 95.67
2cuk_A311 Glycerate dehydrogenase/glyoxylate reductase; stru 95.66
3ce6_A494 Adenosylhomocysteinase; protein-substrate complex, 95.63
1wwk_A307 Phosphoglycerate dehydrogenase; riken structural g 95.61
3aog_A440 Glutamate dehydrogenase; NAD(H), oxidoreducta; HET 95.55
3jtm_A351 Formate dehydrogenase, mitochondrial; mitochondrio 95.54
2qrj_A394 Saccharopine dehydrogenase, NAD+, L-lysine- formin 95.48
4g2n_A345 D-isomer specific 2-hydroxyacid dehydrogenase, Na; 95.44
2hk9_A275 Shikimate dehydrogenase; shikimate pathway, drug d 95.42
2dbq_A334 Glyoxylate reductase; D-3-phosphoglycerate dehydro 95.3
2ekl_A313 D-3-phosphoglycerate dehydrogenase; structural gen 95.29
3u62_A253 Shikimate dehydrogenase; shikimate pathway, oxidor 95.27
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 95.25
3ba1_A333 HPPR, hydroxyphenylpyruvate reductase; two domain 95.14
3t4e_A312 Quinate/shikimate dehydrogenase; structural genomi 95.03
1gpj_A404 Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro 94.96
2g76_A335 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor 94.95
1xdw_A331 NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas 94.83
3gg9_A352 D-3-phosphoglycerate dehydrogenase oxidoreductase; 94.82
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 94.81
4dgs_A340 Dehydrogenase; structural genomics, PSI-biology, N 94.77
1leh_A364 Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi 94.73
2egg_A297 AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff 94.64
2pi1_A334 D-lactate dehydrogenase; oxidoreductase, D-LDH, NA 94.59
2tmg_A415 Protein (glutamate dehydrogenase); metabolic role, 94.44
2nac_A393 NAD-dependent formate dehydrogenase; oxidoreductas 94.42
1sc6_A404 PGDH, D-3-phosphoglycerate dehydrogenase; alloster 94.38
2yfq_A421 Padgh, NAD-GDH, NAD-specific glutamate dehydrogena 94.38
2w2k_A348 D-mandelate dehydrogenase; 2-hydroxyacid dehydroge 94.33
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 94.29
1lu9_A287 Methylene tetrahydromethanopterin dehydrogenase; a 94.19
1j4a_A333 D-LDH, D-lactate dehydrogenase; NAD-dependent dehy 94.19
3evt_A324 Phosphoglycerate dehydrogenase; structural genomic 94.08
1mx3_A347 CTBP1, C-terminal binding protein 1; nuclear prote 94.06
1qp8_A303 Formate dehydrogenase; oxidoreductase; HET: NDP; 2 93.95
3tri_A280 Pyrroline-5-carboxylate reductase; amino acid bios 93.92
3pp8_A315 Glyoxylate/hydroxypyruvate reductase A; structural 93.84
1bgv_A449 Glutamate dehydrogenase; oxidoreductase; HET: GLU; 93.75
1dxy_A333 D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc 93.56
2j6i_A364 Formate dehydrogenase; oxidoreductase, D-specific- 93.54
2d0i_A333 Dehydrogenase; structural genomics, NPPSFA, nation 93.44
3tnl_A315 Shikimate dehydrogenase; structural genomics, cent 93.42
3kb6_A334 D-lactate dehydrogenase; oxidoreductase, D-LDH, NA 93.35
1gdh_A320 D-glycerate dehydrogenase; oxidoreductase(CHOH (D) 93.23
4e5n_A330 Thermostable phosphite dehydrogenase; D-2-hydroxya 92.97
3gvx_A290 Glycerate dehydrogenase related protein; NYSGXRC, 92.96
2yq5_A343 D-isomer specific 2-hydroxyacid dehydrogenase; oxi 92.78
3hg7_A324 D-isomer specific 2-hydroxyacid dehydrogenase FAM 92.77
3kkj_A336 Amine oxidase, flavin-containing; oxidoreductase, 92.74
1hyh_A309 L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 92.69
4hy3_A365 Phosphoglycerate oxidoreductase; PSI-biology, stru 92.56
3phh_A269 Shikimate dehydrogenase; shikimate pathway, helico 92.47
3mw9_A501 GDH 1, glutamate dehydrogenase 1; allostery, inhib 92.38
3gt0_A247 Pyrroline-5-carboxylate reductase; structural geno 92.09
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 92.08
1p77_A272 Shikimate 5-dehydrogenase; NADPH, oxidoreductase; 92.07
1mld_A314 Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D 91.94
2rcy_A262 Pyrroline carboxylate reductase; malaria, structur 91.83
1ygy_A529 PGDH, D-3-phosphoglycerate dehydrogenase; oxidored 91.71
1nyt_A271 Shikimate 5-dehydrogenase; alpha/beta domains, WID 91.53
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 91.53
1a5z_A319 L-lactate dehydrogenase; oxidoreductase, glycolysi 91.33
3i83_A320 2-dehydropantoate 2-reductase; structural genomics 91.26
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 91.22
2izz_A322 Pyrroline-5-carboxylate reductase 1; amino-acid bi 91.0
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 90.81
1pzg_A331 LDH, lactate dehydrogenase; apicomplexa, APAD, tet 90.64
3ggo_A314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 90.61
2g5c_A281 Prephenate dehydrogenase; TYRA, oxidoreductase; HE 90.27
2i99_A312 MU-crystallin homolog; thyroid hormine binding pro 90.09
4huj_A220 Uncharacterized protein; PSI-biology, nysgrc, stru 90.09
1id1_A153 Putative potassium channel protein; RCK domain, E. 90.05
3ado_A319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 89.83
1bg6_A359 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L 89.49
4ej6_A370 Putative zinc-binding dehydrogenase; structural ge 89.39
3rui_A340 Ubiquitin-like modifier-activating enzyme ATG7; au 89.29
2ew2_A316 2-dehydropantoate 2-reductase, putative; alpha-str 89.19
2dq4_A343 L-threonine 3-dehydrogenase; NAD-dependent, oxidor 88.85
3hdj_A313 Probable ornithine cyclodeaminase; APC62486, borde 88.84
2vns_A215 Metalloreductase steap3; metal-binding, transmembr 88.83
3grf_A328 Ornithine carbamoyltransferase; ornithine transcar 88.82
3qsg_A312 NAD-binding phosphogluconate dehydrogenase-like P; 88.82
1jay_A212 Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma 88.81
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 88.76
1npy_A271 Hypothetical shikimate 5-dehydrogenase-like protei 88.74
2zyd_A480 6-phosphogluconate dehydrogenase, decarboxylating; 88.71
2d8a_A348 PH0655, probable L-threonine 3-dehydrogenase; pyro 88.63
4b4u_A303 Bifunctional protein fold; oxidoreductase; HET: NA 88.62
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 88.58
3d1l_A266 Putative NADP oxidoreductase BF3122; structural ge 88.43
2raf_A209 Putative dinucleotide-binding oxidoreductase; NP_7 88.38
2d4a_B308 Malate dehydrogenase; archaea, hyperthermophIle, o 88.2
1lld_A319 L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N 88.13
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 88.13
2hjr_A328 Malate dehydrogenase; malaria, structural genomics 88.09
2f1k_A279 Prephenate dehydrogenase; tyrosine synthesis, X-RA 88.0
1vlv_A325 Otcase, ornithine carbamoyltransferase; TM1097, st 87.98
4ep1_A340 Otcase, ornithine carbamoyltransferase; structural 87.86
1duv_G333 Octase-1, ornithine transcarbamoylase; enzyme-inhi 87.85
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 87.78
3ghy_A335 Ketopantoate reductase protein; oxidoreductase, NA 87.78
3pef_A287 6-phosphogluconate dehydrogenase, NAD-binding; gam 87.73
1zud_1251 Adenylyltransferase THIF; thiamin, thiazole, prote 87.64
2v6b_A304 L-LDH, L-lactate dehydrogenase; oxidoreductase, ra 87.56
2i6u_A307 Otcase, ornithine carbamoyltransferase; X-RAY crys 87.53
1gtm_A419 Glutamate dehydrogenase; oxidoreductase, NAD, NADP 87.52
1pvv_A315 Otcase, ornithine carbamoyltransferase; dodecamer; 87.47
4fgw_A391 Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi 87.46
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 87.1
1t2d_A322 LDH-P, L-lactate dehydrogenase; ternary complex, o 87.07
1obb_A480 Maltase, alpha-glucosidase; glycosidase, sulfinic 86.88
2ewd_A317 Lactate dehydrogenase,; protein-substrate_cofactor 86.86
2ef0_A301 Ornithine carbamoyltransferase; TTHA1199, thermus 86.78
3hwr_A318 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A 86.78
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 86.77
3fef_A450 Putative glucosidase LPLD; gulosidase, structural 86.76
2ahr_A259 Putative pyrroline carboxylate reductase; pyrrolin 86.61
3hn2_A312 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str 86.57
1dxh_A335 Ornithine carbamoyltransferase; transcarbamylase; 86.5
1x7d_A350 Ornithine cyclodeaminase; binds NAD+, binds L-orni 86.15
4hb9_A412 Similarities with probable monooxygenase; flavin, 86.09
1guz_A310 Malate dehydrogenase; oxidoreductase, tricarboxyli 85.96
3c24_A286 Putative oxidoreductase; YP_511008.1, structural g 85.91
1u8x_X472 Maltose-6'-phosphate glucosidase; structural genom 85.91
3l6d_A306 Putative oxidoreductase; structural genomics, prot 85.66
4gbj_A297 6-phosphogluconate dehydrogenase NAD-binding; stru 85.64
4ezb_A317 Uncharacterized conserved protein; structural geno 85.54
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 85.52
2uyy_A316 N-PAC protein; long-chain dehydrogenase, cytokine; 85.45
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 85.45
3d0o_A317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 85.44
3u95_A477 Glycoside hydrolase, family 4; hydrolysis, cytosol 85.36
3nep_X314 Malate dehydrogenase; halophIle, molecular adpatat 85.3
4gsl_A615 Ubiquitin-like modifier-activating enzyme ATG7; ub 85.17
1yb4_A295 Tartronic semialdehyde reductase; structural genom 85.03
1s6y_A450 6-phospho-beta-glucosidase; hydrolase, structural 84.93
1yqd_A366 Sinapyl alcohol dehydrogenase; lignin, monolignol, 84.88
3csu_A310 Protein (aspartate carbamoyltransferase); transfer 84.87
1ml4_A308 Aspartate transcarbamoylase; beta pleated sheet, p 84.83
2i6t_A303 Ubiquitin-conjugating enzyme E2-like isoform A; L- 84.82
3vh1_A598 Ubiquitin-like modifier-activating enzyme ATG7; au 84.76
4dll_A320 2-hydroxy-3-oxopropionate reductase; structural ge 84.44
1ks9_A291 KPA reductase;, 2-dehydropantoate 2-reductase; PAN 84.31
2zqz_A326 L-LDH, L-lactate dehydrogenase; oxidoreductase, ro 84.23
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 84.17
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 84.11
3h5n_A353 MCCB protein; ubiquitin-activating enzyme, microci 83.89
3b1f_A290 Putative prephenate dehydrogenase; enzyme, 4-hydro 83.82
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 83.77
3oz2_A397 Digeranylgeranylglycerophospholipid reductase; str 83.71
1o6z_A303 MDH, malate dehydrogenase; halophilic, ION-binding 83.68
3pdu_A287 3-hydroxyisobutyrate dehydrogenase family protein; 83.61
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 83.44
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 83.36
2xxj_A310 L-LDH, L-lactate dehydrogenase; oxidoreductase, hy 83.21
1omo_A322 Alanine dehydrogenase; two-domain, beta-sandwich-d 82.91
3m6i_A363 L-arabinitol 4-dehydrogenase; medium chain dehydro 82.65
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 82.5
3ip1_A404 Alcohol dehydrogenase, zinc-containing; structural 82.36
1y8q_A346 Ubiquitin-like 1 activating enzyme E1A; SUMO, hete 82.35
2w37_A359 Ornithine carbamoyltransferase, catabolic; transca 82.28
3fpc_A352 NADP-dependent alcohol dehydrogenase; oxydoreducta 82.15
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 82.01
3vrd_B401 FCCB subunit, flavocytochrome C flavin subunit; su 82.0
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 81.99
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 81.65
2p4q_A497 6-phosphogluconate dehydrogenase, decarboxylating; 81.61
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 81.61
3gvi_A324 Malate dehydrogenase; NAD, oxidoreductase, tricarb 81.51
1yqg_A263 Pyrroline-5-carboxylate reductase; structural geno 81.45
3doj_A310 AT3G25530, dehydrogenase-like protein; gamma-hydro 81.37
2pv7_A298 T-protein [includes: chorismate mutase (EC 5.4.99 81.36
1evy_A366 Glycerol-3-phosphate dehydrogenase; rossmann fold, 81.31
3p7m_A321 Malate dehydrogenase; putative dehydrogenase, enzy 81.25
1ez4_A318 Lactate dehydrogenase; rossmann fold, oxidoreducta 81.14
2ywl_A180 Thioredoxin reductase related protein; uncharacter 80.89
1vpd_A299 Tartronate semialdehyde reductase; structural geno 80.87
3tl2_A315 Malate dehydrogenase; center for structural genomi 80.78
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 80.77
2cvz_A289 Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; 80.71
2yjz_A201 Metalloreductase steap4; oxidoreductase, metabolic 81.7
3dme_A369 Conserved exported protein; structural genomics, P 80.66
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 80.54
2ph5_A480 Homospermidine synthase; alpha-beta protein, struc 80.4
1ldn_A316 L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA 80.38
2jae_A489 L-amino acid oxidase; oxidoreductase, dimerisation 80.28
3uko_A378 Alcohol dehydrogenase class-3; alcohol dehydrogena 80.15
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 80.04
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Back     alignment and structure
Probab=100.00  E-value=1.3e-132  Score=1094.29  Aligned_cols=416  Identities=36%  Similarity=0.559  Sum_probs=393.9

Q ss_pred             hHHHHHHhhccCCCCCcEEEeeccccCCccccceeeccchHHHHHHHhcCcccccccccCCcEEEEEecccccccCCCCC
Q psy14495         11 KSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIG   90 (766)
Q Consensus        11 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~i~YtP~v~~~c~~i~~~p~~~~~~~~~~~~v~vvtdG~~iLGlGd~G   90 (766)
                      ++++++|+||+++ +|||++.||+|++|++|||++|||||+++|++|.+||...|+||+|||+|+|||||||||||||||
T Consensus        31 ~~~~~al~~h~~~-~GKi~v~~~~~~~~~~dLslaYTPgVa~~c~~i~~dp~~~~~yt~kgn~VaVVTDG~aILGLGDiG  109 (487)
T 3nv9_A           31 FYKELAEKVHKFY-KGKIQIMPKCTLAGFNWFNAYYTPGVSRISTNIRDNNDSSLFYSLRGNFVGVVSDSTRVLGDGDVT  109 (487)
T ss_dssp             HHHHHHHHHHHHH-TSSEEEEECSCCSSGGGHHHHSTTTHHHHHHHHHHCGGGHHHHSGGGGEEEEEECSSSBGGGBCCC
T ss_pred             hhHHHHHHHhhhC-CCeEEEEecCCCCCHHHCeeeeCcchHHHHHHHHhChHHHhhhcccCCEEEEEEcCceeeeccccc
Confidence            4679999999984 899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccchhhhHHHHhhhcCCCccccCCCCC------CHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCc
Q psy14495         91 PLASKPVMEGKAVLFKKFAGIDVFDLEINET------DPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIP  164 (766)
Q Consensus        91 ~~~~~~i~~gK~~ly~~~~gi~~l~v~~~~~------~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~  164 (766)
                      ++|||||||||++|||+|||||+|||++|+.      |+|||+++|+++||+||+||||||++||||+||+|||++++||
T Consensus       110 ~~agmpImeGKl~Lyk~~aGId~lPI~LD~gt~~~~~d~defve~v~~~~P~fG~InlEDf~ap~af~il~ryr~~~~ip  189 (487)
T 3nv9_A          110 PPGGLGVMEGKALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQHTFGAINLEDISQPNCYKILDVLRESCDIP  189 (487)
T ss_dssp             GGGGHHHHHHHHHHHHHHHCCEEEEEECCCBCTTSCBCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHHCSSC
T ss_pred             cccCCchhhhHHHHHHhcCCCceeeeEEeCCCccccCCHHHHHHHHHHhCCCCCeecHhhcCCchHHHHHHHHHhhccCC
Confidence            9888999999999999999999999999998      9999999999999999999999999999999999999999999


Q ss_pred             EEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCC----
Q psy14495        165 VFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELM----  240 (766)
Q Consensus       165 ~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l----  240 (766)
                      ||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+++|++++||||||++|||+++| ++|    
T Consensus       190 vFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R-~~l~~~~  268 (487)
T 3nv9_A          190 VWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGR-EDIKKDT  268 (487)
T ss_dssp             EEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTC-HHHHHCG
T ss_pred             ccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCc-chhhhhc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999 456    


Q ss_pred             -cHHHHHhccccC---CCCHHHHhccCcEEEecC--CCCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhcccCcEEEE
Q psy14495        241 -DSNKARFIKDTT---ARTLSDIIPNADIFLGLS--VSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIA  314 (766)
Q Consensus       241 -~~~k~~~a~~~~---~~~L~e~i~~~~vliG~S--~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~~~~~ai~a  314 (766)
                       +++|.+||+.++   ..+|+|+|+++|||||+|  ++|+||+|||++|++||||||||||||||+||||+++ |++|||
T Consensus       269 ~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~pe~A~~~-G~aIvA  347 (487)
T 3nv9_A          269 RFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPYEAKEA-GAYIVA  347 (487)
T ss_dssp             GGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHHT-TCSEEE
T ss_pred             ccHHHHHHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCHHHHHHh-CCEEEE
Confidence             558889999763   579999999999999999  4699999999999999999999999999999999985 679999


Q ss_pred             cCCCCCcccccccccccchhhhhhcccCCcCCHHHHHHHHHHHHhccccccchhhhhhhcccccCCCccccCCCCCChhh
Q psy14495        315 TGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRL  394 (766)
Q Consensus       315 tG~~~~p~Q~NN~~~FPgi~~g~l~~~a~~i~~~m~~aAa~aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~~~v  394 (766)
                      ||||+||||+||+|+|||||||+|+++|++|||+|+++||++||+++++++              ++++++||+++++++
T Consensus       348 TGrsd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA~ALA~~v~~~~--------------l~~~~i~P~~~d~~V  413 (487)
T 3nv9_A          348 TGRGDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAASRALAEFAEKRG--------------INPDNIIGTMDEPGI  413 (487)
T ss_dssp             ESCTTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHTC--------------CBTTBCSCCTTCTTH
T ss_pred             ECCCCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHHHHHHhhCCccc--------------CCCCceeCCccccch
Confidence            999999999999999999999999999999999999999999999988754              456789999999999


Q ss_pred             HhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHhhhhhhccccccchHHHH
Q psy14495        395 MIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQI  443 (766)
Q Consensus       395 s~~IA~aVa~~a~~~gvA~~~~~d~~~~~~~~~~~~~~s~~~m~~L~~~  443 (766)
                      +.+||.+|+++|+++|+|+.++.++++|.+.+++++..++.+++.+.+.
T Consensus       414 s~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  462 (487)
T 3nv9_A          414 FPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDIKEARESAQLLQDS  462 (487)
T ss_dssp             HHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999999885588999888889888877766666554
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Back     alignment and structure
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Back     alignment and structure
>4e4r_A Phosphate acetyltransferase; structural genomics, EUTD, center for structural genomics of infectious diseases, csgid; HET: TRS; 1.44A {Staphylococcus aureus subsp} Back     alignment and structure
>2af4_C Phosphate acetyltransferase; PTA dimer with one COA ligand bound PER monomer, acyltransferase; HET: COA; 2.15A {Methanosarcina thermophila} SCOP: c.77.1.5 PDB: 1qzt_A* 2af3_C* Back     alignment and structure
>1vmi_A Putative phosphate acetyltransferase; NP_416953.1, structura genomics, JCSG, protein structure initiative, PSI, joint CE structural genomics; 2.32A {Escherichia coli} SCOP: c.77.1.5 Back     alignment and structure
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A Back     alignment and structure
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5 Back     alignment and structure
>3uf6_A LMO1369 protein; structural genomics, the center for structural genomics of I diseases, csgid, unknown function, transferase; HET: COD; 1.80A {Listeria monocytogenes} PDB: 3tng_A* 3u9e_A* Back     alignment and structure
>1yco_A Branched-chain phosphotransacylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.40A {Enterococcus faecalis} Back     alignment and structure
>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} SCOP: c.77.1.4 Back     alignment and structure
>1u7n_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, enterococcus faecalis V583, PSI, protein structure initiative; HET: MSE; 2.26A {Enterococcus faecalis} SCOP: c.77.1.4 Back     alignment and structure
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Back     alignment and structure
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Back     alignment and structure
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa} Back     alignment and structure
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400} Back     alignment and structure
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium} Back     alignment and structure
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp} Back     alignment and structure
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Back     alignment and structure
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum} Back     alignment and structure
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 Back     alignment and structure
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* Back     alignment and structure
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} Back     alignment and structure
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} Back     alignment and structure
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* Back     alignment and structure
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum} Back     alignment and structure
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E Back     alignment and structure
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} Back     alignment and structure
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} Back     alignment and structure
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A Back     alignment and structure
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} Back     alignment and structure
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} Back     alignment and structure
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus} Back     alignment and structure
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Back     alignment and structure
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A Back     alignment and structure
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 Back     alignment and structure
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* Back     alignment and structure
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1 Back     alignment and structure
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} Back     alignment and structure
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Back     alignment and structure
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Back     alignment and structure
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A Back     alignment and structure
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} Back     alignment and structure
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A Back     alignment and structure
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} Back     alignment and structure
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Back     alignment and structure
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} Back     alignment and structure
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A Back     alignment and structure
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A Back     alignment and structure
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* Back     alignment and structure
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} Back     alignment and structure
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Back     alignment and structure
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Back     alignment and structure
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} Back     alignment and structure
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* Back     alignment and structure
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* Back     alignment and structure
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 Back     alignment and structure
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} Back     alignment and structure
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} Back     alignment and structure
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} Back     alignment and structure
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Back     alignment and structure
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Back     alignment and structure
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A Back     alignment and structure
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A Back     alignment and structure
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* Back     alignment and structure
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus} Back     alignment and structure
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Back     alignment and structure
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Back     alignment and structure
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* Back     alignment and structure
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Back     alignment and structure
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* Back     alignment and structure
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 Back     alignment and structure
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} Back     alignment and structure
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Back     alignment and structure
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A Back     alignment and structure
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 Back     alignment and structure
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A Back     alignment and structure
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} Back     alignment and structure
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* Back     alignment and structure
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus} Back     alignment and structure
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 Back     alignment and structure
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* Back     alignment and structure
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} Back     alignment and structure
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* Back     alignment and structure
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Back     alignment and structure
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} Back     alignment and structure
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* Back     alignment and structure
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A* Back     alignment and structure
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* Back     alignment and structure
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Back     alignment and structure
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} Back     alignment and structure
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* Back     alignment and structure
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Back     alignment and structure
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Back     alignment and structure
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} Back     alignment and structure
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 Back     alignment and structure
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Back     alignment and structure
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Back     alignment and structure
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} Back     alignment and structure
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Back     alignment and structure
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} Back     alignment and structure
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Back     alignment and structure
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis} Back     alignment and structure
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Back     alignment and structure
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A* Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Back     alignment and structure
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Back     alignment and structure
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Back     alignment and structure
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1 Back     alignment and structure
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis} Back     alignment and structure
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A* Back     alignment and structure
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Back     alignment and structure
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} Back     alignment and structure
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Back     alignment and structure
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Back     alignment and structure
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Back     alignment and structure
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A Back     alignment and structure
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A Back     alignment and structure
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A Back     alignment and structure
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae} Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Back     alignment and structure
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Back     alignment and structure
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Back     alignment and structure
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus} Back     alignment and structure
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis} Back     alignment and structure
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A Back     alignment and structure
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} Back     alignment and structure
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A Back     alignment and structure
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* Back     alignment and structure
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens} Back     alignment and structure
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Back     alignment and structure
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} Back     alignment and structure
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Back     alignment and structure
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} Back     alignment and structure
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A* Back     alignment and structure
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Back     alignment and structure
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A Back     alignment and structure
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} Back     alignment and structure
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Back     alignment and structure
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ... Back     alignment and structure
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1 Back     alignment and structure
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Back     alignment and structure
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A Back     alignment and structure
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Back     alignment and structure
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* Back     alignment and structure
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A Back     alignment and structure
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum} Back     alignment and structure
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A Back     alignment and structure
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Back     alignment and structure
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A Back     alignment and structure
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Back     alignment and structure
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* Back     alignment and structure
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii} Back     alignment and structure
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A* Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} Back     alignment and structure
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Back     alignment and structure
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* Back     alignment and structure
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* Back     alignment and structure
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Back     alignment and structure
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A* Back     alignment and structure
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Back     alignment and structure
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Back     alignment and structure
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} Back     alignment and structure
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Back     alignment and structure
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Back     alignment and structure
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 766
d1xcoa_324 c.77.1.5 (A:) Phosphotransacetylase Pta {Bacillus 8e-75
d1r5ja_329 c.77.1.5 (A:) Phosphotransacetylase Pta {Streptoco 2e-72
d2af4c1332 c.77.1.5 (C:2-333) Phosphotransacetylase Pta {Meth 2e-72
d1vmia_329 c.77.1.5 (A:) Ethanolamine utilization protein Eut 1e-69
d1vl6a2154 c.58.1.3 (A:1-154) Malate oxidoreductase (malic en 2e-69
d1gq2a1298 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent 2e-65
d1pj3a1294 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent 2e-64
d1o0sa1308 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent 5e-64
d1vl6a1222 c.2.1.7 (A:155-376) Malate oxidoreductase (malic e 2e-57
d1gq2a2257 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent 6e-27
d1pj3a2259 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent 7e-27
d1o0sa2294 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent 3e-25
>d1xcoa_ c.77.1.5 (A:) Phosphotransacetylase Pta {Bacillus subtilis [TaxId: 1423]} Length = 324 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Phosphotransacetylase
domain: Phosphotransacetylase Pta
species: Bacillus subtilis [TaxId: 1423]

 Score =  243 bits (621), Expect = 8e-75
 Identities = 94/329 (28%), Positives = 164/329 (49%), Gaps = 7/329 (2%)

Query: 437 MNPIFQ-IAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKL 495
           M  +F  + +K      +I++ EG +E+IL A+  +    +  PI+IG    ++   K+L
Sbjct: 2   MADLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKEL 61

Query: 496 RLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHK 555
            L +      +I DP   +  +D  + +  +  RKG   +    K        G M ++K
Sbjct: 62  NLTLG---GVKIYDPHTYEGMEDLVQAF--VERRKGKATEEQARKALLDENYFGTMLVYK 116

Query: 556 GNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDRQLMLVDTHINENPNA 615
           G ADG++ G   ST   +    QII  K      + +  +   + Q +  D  IN  P++
Sbjct: 117 GLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARGEEQYVFADCAINIAPDS 176

Query: 616 EELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDG 675
           ++L+EI I +A       ++PRVA+LS S  GS  +    K+  A+K+ +++ PEL +DG
Sbjct: 177 QDLAEIAIESANTAKMFDIEPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDG 236

Query: 676 EMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLG 735
           E   + A    +  K+ P+S++ GDAN+ V P++E+ NI Y + +   GN  A+GPIL G
Sbjct: 237 EFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQ-RLGNFEAVGPILQG 295

Query: 736 CSKPIHILTSSATVRRIVNMTALCVIDAL 764
            + P++ L+       + N+  +    AL
Sbjct: 296 LNMPVNDLSRGCNAEDVYNLALITAAQAL 324
>d1r5ja_ c.77.1.5 (A:) Phosphotransacetylase Pta {Streptococcus pyogenes [TaxId: 1314]} Length = 329 Back     information, alignment and structure
>d2af4c1 c.77.1.5 (C:2-333) Phosphotransacetylase Pta {Methanosarcina thermophila [TaxId: 2210]} Length = 332 Back     information, alignment and structure
>d1vmia_ c.77.1.5 (A:) Ethanolamine utilization protein EutD {Escherichia coli [TaxId: 562]} Length = 329 Back     information, alignment and structure
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Length = 154 Back     information, alignment and structure
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 298 Back     information, alignment and structure
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 294 Back     information, alignment and structure
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 308 Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Length = 222 Back     information, alignment and structure
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 257 Back     information, alignment and structure
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 294 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query766
d2af4c1332 Phosphotransacetylase Pta {Methanosarcina thermoph 100.0
d1xcoa_324 Phosphotransacetylase Pta {Bacillus subtilis [TaxI 100.0
d1r5ja_329 Phosphotransacetylase Pta {Streptococcus pyogenes 100.0
d1vmia_329 Ethanolamine utilization protein EutD {Escherichia 100.0
d1pj3a1294 Mitochondrial NAD(P)-dependent malic enzyme {Human 100.0
d1gq2a1298 Mitochondrial NAD(P)-dependent malic enzyme {Domes 100.0
d1o0sa1308 Mitochondrial NAD(P)-dependent malic enzyme {Pig r 100.0
d1vl6a1222 Malate oxidoreductase (malic enzyme) {Thermotoga m 100.0
d1vl6a2154 Malate oxidoreductase (malic enzyme) {Thermotoga m 100.0
d1vi1a_334 Fatty acid/phospholipid synthesis protein PlsX {Ba 100.0
d1u7na_329 Fatty acid/phospholipid synthesis protein PlsX {En 100.0
d1gq2a2257 Mitochondrial NAD(P)-dependent malic enzyme {Domes 100.0
d1pj3a2259 Mitochondrial NAD(P)-dependent malic enzyme {Human 100.0
d1o0sa2294 Mitochondrial NAD(P)-dependent malic enzyme {Pig r 100.0
d1ptma_329 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 98.53
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 98.0
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 97.66
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 97.42
d1v9la1242 Glutamate dehydrogenase {Pyrobaculum islandicum [T 97.19
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 97.01
d1c1da1201 Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ 96.96
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 96.89
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 96.83
d1b26a1234 Glutamate dehydrogenase {Thermotoga maritima [TaxI 96.74
d1gtma1239 Glutamate dehydrogenase {Archaeon Pyrococcus furio 96.46
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 96.32
d1sc6a1188 Phosphoglycerate dehydrogenase {Escherichia coli [ 96.3
d1bgva1255 Glutamate dehydrogenase {Clostridium symbiosum [Ta 95.9
d2naca1188 Formate dehydrogenase {Pseudomonas sp., strain 101 95.88
d1hwxa1293 Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 95.79
d1mx3a1193 Transcription corepressor CtbP {Human (Homo sapien 95.74
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 95.72
d1j4aa1197 D-lactate dehydrogenase {Lactobacillus helveticus 95.2
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 95.07
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 95.03
d1gdha1191 D-glycerate dehydrogenase {Hyphomicrobium methylov 94.98
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 94.94
d1dxya1199 D-2-hydroxyisocaproate dehydrogenase {Lactobacillu 94.91
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 94.86
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 94.62
d1leha1230 Leucine dehydrogenase {Bacillus sphaericus [TaxId: 94.6
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 94.46
d1qp8a1181 Putative formate dehydrogenase {Archaeon Pyrobacul 94.39
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 94.22
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 94.04
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 93.87
d1ygya1184 Phosphoglycerate dehydrogenase {Mycobacterium tube 93.87
d1mlda1144 Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 93.77
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 93.76
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 93.69
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 93.41
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 93.3
d1b0aa1166 Methylenetetrahydrofolate dehydrogenase/cyclohydro 93.18
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 93.04
d1obba1171 Alpha-glucosidase AglA {Thermotoga maritima [TaxId 92.67
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 92.5
d1a4ia1170 Methylenetetrahydrofolate dehydrogenase/cyclohydro 92.11
d1s6ya1169 6-phospho-beta-glucosidase {Bacillus stearothermop 91.96
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 91.94
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 91.92
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 91.87
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 91.57
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 91.54
d2ahra2152 Pyrroline-5-carboxylate reductase ProC {Streptococ 91.43
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 91.37
d1nvta1177 Shikimate 5-dehydrogenase AroE {Archaeon Methanoco 91.3
d1w4xa1298 Phenylacetone monooxygenase {Thermobifida fusca [T 91.09
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 90.33
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 90.3
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 90.19
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 90.08
d2dw4a2449 Lysine-specific histone demethylase 1, LSD1 {Human 90.08
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 90.01
d1jw9b_247 Molybdenum cofactor biosynthesis protein MoeB {Esc 89.89
d2ivda1347 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 89.13
d1u8xx1167 Maltose-6'-phosphate glucosidase GlvA {Bacillus su 89.0
d3c96a1288 Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 88.97
d1cjca2230 Adrenodoxin reductase of mitochondrial p450 system 88.94
d1o6za1142 Malate dehydrogenase {Archaeon Haloarcula marismor 88.66
d1up7a1162 6-phospho-beta-glucosidase {Thermotoga maritima [T 88.57
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 88.55
d1i36a2152 Conserved hypothetical protein MTH1747 {Archaeon M 88.46
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 88.44
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 88.4
d1pj5a2305 N,N-dimethylglycine oxidase {Arthrobacter globifor 88.39
d1d5ta1336 Guanine nucleotide dissociation inhibitor, GDI {Co 87.76
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 87.71
d2bcgg1297 Guanine nucleotide dissociation inhibitor, GDI {Ba 87.66
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 87.63
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 86.71
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 86.66
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 86.62
d1lqta2239 Ferredoxin:NADP reductase FprA {Mycobacterium tube 86.61
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 86.51
d1k0ia1292 p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a 86.3
d1yqga2152 Pyrroline-5-carboxylate reductase ProC {Neisseria 86.29
d2ldxa1159 Lactate dehydrogenase {Mouse (Mus musculus) [TaxId 85.89
d1edza1171 Methylenetetrahydrofolate dehydrogenase/cyclohydro 85.87
d1i8ta1298 UDP-galactopyranose mutase, N-terminal domain {Esc 85.63
d2v5za1383 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 84.99
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 84.97
d2gv8a1335 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 84.86
d1ryia1276 Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} 84.78
d1y6ja1142 Lactate dehydrogenase {Clostridium thermocellum [T 84.67
d2i0za1251 Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] 84.18
d1dxla1221 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 83.99
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 83.65
d1v59a1233 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 83.03
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 82.72
d1h2ba2172 Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ 82.72
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 82.59
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 82.53
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 82.26
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 82.02
d1trba1190 Thioredoxin reductase {Escherichia coli [TaxId: 56 81.91
d1vjta1193 Putative alpha-glucosidase TM0752 {Thermotoga mari 81.87
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 81.7
d2gqfa1253 Hypothetical protein HI0933 {Haemophilus influenza 81.67
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 81.3
d2gf3a1281 Sarcosine oxidase {Bacillus sp., strain b0618 [Tax 81.22
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 80.7
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 80.44
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 80.25
>d2af4c1 c.77.1.5 (C:2-333) Phosphotransacetylase Pta {Methanosarcina thermophila [TaxId: 2210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Phosphotransacetylase
domain: Phosphotransacetylase Pta
species: Methanosarcina thermophila [TaxId: 2210]

Probab=100.00  E-value=5.8e-75  Score=628.04  Aligned_cols=322  Identities=26%  Similarity=0.406  Sum_probs=309.4

Q ss_pred             cccchHHHHHHhhhccccEEEEecCCCHHHHHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCc
Q psy14495        435 AFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNK  514 (766)
Q Consensus       435 ~~m~~L~~~ak~~~~~~krIv~~e~~d~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~  514 (766)
                      .|+++++++||++|   ||||||||+|+|+|+||.++.++|+++|||||++++|++.+++.++  +   +++||||.+.+
T Consensus         2 ~~~~~i~~~Ak~~~---krIvf~Eg~D~rvL~Aa~~~~~~gi~~pILiG~~~~I~~~~~~l~l--~---~~~iIdp~~~~   73 (332)
T d2af4c1           2 TFLEKISERAKKLN---KTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDL--S---KAKIVDPKTYE   73 (332)
T ss_dssp             HHHHHHHHHHHHHC---CEEEECCTTSHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHSSCCC--T---TSEEECTTSCT
T ss_pred             ChHHHHHHHHHhCC---CEEEEcCCCCHHHHHHHHHHHHcCCeeEEEECCHHHHHHHHHhCCC--C---cCeEECCcccc
Confidence            37899999999998   8999999999999999999999999999999999999999987765  3   69999999999


Q ss_pred             chhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHHHhccCCCccceeEEEE
Q psy14495        515 QYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSN  594 (766)
Q Consensus       515 ~~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~iig~~~g~~~~s~~~i  594 (766)
                      .+++|++.|+++|++||+++++|++.+ ++++++|++||+.|+||++|||.+++|+++|+++++++|..+|.+++|++++
T Consensus        74 ~~~~y~~~~~~~r~~KG~~~~~A~~~~-~~~~~~a~~mV~~G~aD~lv~G~~~~t~~~lr~~l~~ig~~~~~~~~s~~~i  152 (332)
T d2af4c1          74 KKDEYINAFYELRKHKGITLENAAEIM-SDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFI  152 (332)
T ss_dssp             THHHHHHHHHHHHGGGTCCHHHHHHHT-TSHHHHHHHHHHTTSCSEEEECTTSCSHHHHHHHHHHTCBSTTCSCCEEEEE
T ss_pred             hhHHHHHHHHHHHhhcCCCHHHHHHHh-cchhHHHHHHHHcCCchheeeccccCcHHHhhhhhheeeccccccccceeEE
Confidence            999999999999999999999999877 5899999999999999999999999999999999999999999999999999


Q ss_pred             EEeC------CCeEEEEeccccCCCCHHHHHHHHHHHHHHHHHcCCC-CeEEEeeCccCCCCCCcchHHHHHHHHHHHcc
Q psy14495        595 LILM------DRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLK-PRVALLSNSNFGSNNNISAHKMRTALKLIQKQ  667 (766)
Q Consensus       595 ~~~~------~~~~~l~D~g~Ni~P~~e~L~~ia~~aa~~a~~lGi~-PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~  667 (766)
                      |..+      ++++||+||++|++||++||++||++++.+++.||++ |||||||+||+||+++|++.++++|.++++++
T Consensus       153 ~~~p~~~~~~~~~l~~tD~avn~~P~~eqla~Ia~~aa~~~~~~g~~~PkVAlLS~s~~gs~~~~~~~~~~~a~~~~~~~  232 (332)
T d2af4c1         153 ISVPDCEYGSDGTFLFADSGMVEMPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQEL  232 (332)
T ss_dssp             EECTTCCSTBTTEEEEETSSSCSSCCHHHHHHHHHHHHHHHHHHHCSCCEEEEECSCSTTSCCSHHHHHHHHHHHHHHHH
T ss_pred             EEccccccCCCceEEEecccceeCCcHHHHHHHHHHHHHHHHhccccccceeEEeecccCCCCCchhhhHHHHHHHHhhh
Confidence            9753      6889999999999999999999999999999998776 99999999999999999999999999999999


Q ss_pred             CCCceEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecCCCC
Q psy14495        668 MPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSA  747 (766)
Q Consensus       668 ~~~~~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~sr~~  747 (766)
                      .|++.||||||+|+|++++++++|+|+|+++|+||||||||+++|||+||++++ ++++..+||||+|+++||+++||++
T Consensus       233 ~~~~~vdGemq~D~Al~~~~a~~k~~~s~v~G~AnvLIfPnl~agNi~yK~l~~-~~~a~~~Gpil~G~~~Pv~~~sR~~  311 (332)
T d2af4c1         233 APDIAIDGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQR-LAKAEAYGPITQGLAKPINDLSRGC  311 (332)
T ss_dssp             CTTSEEEEEECHHHHHCHHHHHHHSTTCSSTTSCCEEECSSHHHHHHHHHHHHH-TSCCEEEEEEEESBSSCEEECCTTC
T ss_pred             CCCceeccchhhhhccCHHHHHhcCCCCCCCCCCCEEEeCChHHhHHHHHHHHH-hcCCeEEcchhhcCCCCEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999999 9999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHhcC
Q psy14495        748 TVRRIVNMTALCVIDALSK  766 (766)
Q Consensus       748 s~~~i~n~ialA~~~a~~~  766 (766)
                      |+++|+|++++|+++||.+
T Consensus       312 s~~~i~~~~alaa~~A~~~  330 (332)
T d2af4c1         312 SDEDIVGAVAITCVQAAAQ  330 (332)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999853
>d1xcoa_ c.77.1.5 (A:) Phosphotransacetylase Pta {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1r5ja_ c.77.1.5 (A:) Phosphotransacetylase Pta {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1vmia_ c.77.1.5 (A:) Ethanolamine utilization protein EutD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Back     information, alignment and structure
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vi1a_ c.77.1.4 (A:) Fatty acid/phospholipid synthesis protein PlsX {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1u7na_ c.77.1.4 (A:) Fatty acid/phospholipid synthesis protein PlsX {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Back     information, alignment and structure
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Back     information, alignment and structure
>d1ptma_ c.77.1.3 (A:) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} Back     information, alignment and structure
>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} Back     information, alignment and structure
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure