Psyllid ID: psy14591

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
MRLGVEALRTCERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEEGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDFS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHcccccHccHHHHcccEEEEccccccccccccccccccccccccHHHccccccccccccccccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHEcccHHHHHHHHHHHHcccccEEEEEcc
Coil and Loop (DISEMBL)
MRLGVEALRTCERKLKEEEEVKGQRKKAEEKKKKKRraegrgggerteeeggeeeeeeeeeeeeeglpastnppanvispqslghqrpsldlasspsvkkrSRHAArlnmgdpkddIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDFS
Flexible Loop (DISEMBL)
mrlgvealrtcerklkeeeevkgqrkkaeekkkkkrraegrgggerteeeggeeeeeeeeeeeeeglpastnppANVISPQSLGhqrpsldlasspsvkKRSRHAarlnmgdpkddIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDFS
Low Complexity Region (SEG)
MRLGVEALRTCERKLKEEEEVKGQrkkaeekkkkkrraegrgggerteeeggeeeeeeeeeeeeegLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDFS
Disordered region (IsUnstruct)
*******************************************************************************************************************DIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLF***
Disordered Region (DISOPRED)
***GV*ALRT********************************************************************************************************DDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLR**LFDF*
Disordered Region (DISEMBL)
MRLGVEALRTCERKL*******************************************************TNPPANVISPQ***********************AARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDFS
Disordered Region (DISPRO)
*RLGVEALRTCERKLKEEEEVKGQRKKA**********************************************************************************GDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDFS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRLGVEALRTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGxxxxxxxxxxxxxxxxxxxxxEGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	164	2.2.26 [Sep-21-2011]
Q9VUC6	1183	Formin-like protein CG321	yes	N/A	0.469	0.065	0.692	6e-26
A2APV2	1086	Formin-like protein 2 OS=	yes	N/A	0.548	0.082	0.436	1e-12
Q96PY5	1086	Formin-like protein 2 OS=	yes	N/A	0.548	0.082	0.436	2e-12
Q6ZPF4	1028	Formin-like protein 3 OS=	no	N/A	0.274	0.043	0.644	6e-12
Q8IVF7	1028	Formin-like protein 3 OS=	no	N/A	0.274	0.043	0.644	6e-12
Q9JL26	1094	Formin-like protein 1 OS=	no	N/A	0.274	0.041	0.577	7e-10
O95466	1100	Formin-like protein 1 OS=	no	N/A	0.628	0.093	0.377	8e-10

>sp|Q9VUC6|Y2138_DROME Formin-like protein CG32138 OS=Drosophila melanogaster GN=CG32138 PE=1 SV=3

 Score =  116 bits (290), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 1/78 (1%)

Query: 82  SLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKH 140
           S G  RP++ D   SPS+K+RSRH A+LNMG   DDIHV I+CLRAIMNNKYG NMVI+H
Sbjct: 281 SYGFLRPTIADALDSPSLKRRSRHIAKLNMGAATDDIHVSIMCLRAIMNNKYGFNMVIQH 340

Query: 141 TEAINSIALSLMHKSLRA 158
            EAIN IALSL+HKSLR 
Sbjct: 341 REAINCIALSLIHKSLRT 358

Drosophila melanogaster (taxid: 7227)

>sp|A2APV2|FMNL2_MOUSE Formin-like protein 2 OS=Mus musculus GN=Fmnl2 PE=2 SV=2

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 4/94 (4%)

Query: 65  EGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCL 124
           E L   +N P+ V +  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CL
Sbjct: 173 EDLHRGSNLPSPVGNSVSRSGRHSALRYNTLPS--RRTLKNSRL--VSKKDDVHVCIMCL 228

Query: 125 RAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           RAIMN +YG NMV+ H  A+N IALSL +K+ R 
Sbjct: 229 RAIMNYQYGFNMVMSHPHAVNEIALSLNNKNPRT 262

Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics.

Mus musculus (taxid: 10090)

>sp|Q96PY5|FMNL2_HUMAN Formin-like protein 2 OS=Homo sapiens GN=FMNL2 PE=1 SV=3

 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 4/94 (4%)

Query: 65  EGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCL 124
           E L   +N P+ V +  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CL
Sbjct: 173 EDLHRGSNLPSPVGNSVSRSGRHSALRYNTLPS--RRTLKNSRL--VSKKDDVHVCIMCL 228

Query: 125 RAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           RAIMN +YG NMV+ H  A+N IALSL +K+ R 
Sbjct: 229 RAIMNYQYGFNMVMSHPHAVNEIALSLNNKNPRT 262

Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics.

Homo sapiens (taxid: 9606)

>sp|Q6ZPF4|FMNL3_MOUSE Formin-like protein 3 OS=Mus musculus GN=Fmnl3 PE=1 SV=2

 Score = 70.1 bits (170), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 36/45 (80%)

Query: 114 KDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           KDD+HVCILCLRAIMN +YG N+V+ H  A+N IALSL +K+ R 
Sbjct: 221 KDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRT 265

Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape and migration.

Mus musculus (taxid: 10090)

>sp|Q8IVF7|FMNL3_HUMAN Formin-like protein 3 OS=Homo sapiens GN=FMNL3 PE=1 SV=3

 Score = 70.1 bits (170), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 36/45 (80%)

Query: 114 KDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           KDD+HVCILCLRAIMN +YG N+V+ H  A+N IALSL +K+ R 
Sbjct: 221 KDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRT 265

Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape and migration.

Homo sapiens (taxid: 9606)

>sp|Q9JL26|FMNL_MOUSE Formin-like protein 1 OS=Mus musculus GN=Fmnl1 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 34/45 (75%)

Query: 114 KDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           KDD+HVCI+CLRAIMN + G ++V+ H   +N IALSL +KS R 
Sbjct: 223 KDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEIALSLNNKSPRT 267

Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics and cell shape. May play a role in the control of cell motility and survival of macrophages.

Mus musculus (taxid: 10090)

>sp|O95466|FMNL_HUMAN Formin-like protein 1 OS=Homo sapiens GN=FMNL1 PE=1 SV=3

 Score = 63.2 bits (152), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 11/114 (9%)

Query: 45  ERTEEEGGEEEEEEEEEEEEEGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRH 104
           E T+      E+ +  E+  E L  S  PP++V  P+S  H    L  A S    + SR 
Sbjct: 166 ESTDNGASNSEKNKPLEQSVEDL--SKGPPSSV--PKS-RHLTIKLTPAHSRKALRNSRI 220

Query: 105 AARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
            ++      KDD+HVCI+CLRAIMN + G ++V+ H   +N IALSL +K+ R 
Sbjct: 221 VSQ------KDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEIALSLNNKNPRT 268

May play a role in the control of cell motility and survival of macrophages (By similarity). Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics and cell shape.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
328703354	1102	PREDICTED: formin-like protein CG32138-l	0.457	0.068	0.8	2e-31
345485242	1102	PREDICTED: formin-like protein CG32138-l	0.603	0.089	0.647	1e-27
340729138	1084	PREDICTED: formin-like protein CG32138-l	0.487	0.073	0.740	4e-27
380014004	1024	PREDICTED: formin-like protein CG32138-l	0.487	0.078	0.740	5e-27
383857954	1084	PREDICTED: formin-like protein CG32138-l	0.487	0.073	0.728	7e-27
307187702	1019	Formin-like protein 2 [Camponotus florid	0.457	0.073	0.763	1e-26
307209921	1012	Formin-like protein 2 [Harpegnathos salt	0.487	0.079	0.728	1e-26
332023967	1084	Formin-like protein [Acromyrmex echinati	0.487	0.073	0.728	1e-26
157123018	983	hypothetical protein AaeL_AAEL009371 [Ae	0.621	0.103	0.538	3e-26
158297823	1125	AGAP004805-PB [Anopheles gambiae str. PE	0.682	0.099	0.539	4e-26

>gi|328703354|ref|XP_001944392.2| PREDICTED: formin-like protein CG32138-like [Acyrthosiphon pisum]

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/75 (80%), Positives = 68/75 (90%)

Query: 84  GHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEA 143
            H RP+LD+  SP +K+RSRHAA+LNMGD KDDIHVCI+CLRAIMNNKYGLNMVI+HT+A
Sbjct: 231 NHARPTLDVLDSPGIKRRSRHAAKLNMGDTKDDIHVCIMCLRAIMNNKYGLNMVIQHTDA 290

Query: 144 INSIALSLMHKSLRA 158
           INSIALSLMHKSLR 
Sbjct: 291 INSIALSLMHKSLRT 305

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345485242|ref|XP_003425225.1| PREDICTED: formin-like protein CG32138-like isoform 1 [Nasonia vitripennis] gi|345485244|ref|XP_003425226.1| PREDICTED: formin-like protein CG32138-like isoform 2 [Nasonia vitripennis]

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 74/102 (72%), Gaps = 3/102 (2%)

Query: 58  EEEEEEEEGLPASTNPPANVISPQSLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDD 116
           E     EE + A+T    N  SP + G  RP L +L  SP VK+RSRH ARLNMG+ KDD
Sbjct: 203 ESRANSEERIQATTGTGDN--SPLNNGCLRPPLHELKDSPGVKRRSRHVARLNMGEAKDD 260

Query: 117 IHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           IHVCILC+RAIMNNKYG NMVI+H EAIN IALSLMHKSLR 
Sbjct: 261 IHVCILCMRAIMNNKYGFNMVIQHREAINCIALSLMHKSLRT 302

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729138|ref|XP_003402865.1| PREDICTED: formin-like protein CG32138-like [Bombus terrestris] gi|350401567|ref|XP_003486193.1| PREDICTED: formin-like protein CG32138-like [Bombus impatiens]

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/81 (74%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 79  SPQSLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMV 137
           SP + G  RP L +L  SP VK+RSRH ARLNMG+ KDDIHVCILC+RAIMNNKYG NMV
Sbjct: 210 SPLNNGCLRPPLHELKDSPGVKRRSRHVARLNMGEAKDDIHVCILCMRAIMNNKYGFNMV 269

Query: 138 IKHTEAINSIALSLMHKSLRA 158
           I+H EAIN IALSLMHKSLR 
Sbjct: 270 IQHREAINCIALSLMHKSLRT 290

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014004|ref|XP_003691034.1| PREDICTED: formin-like protein CG32138-like [Apis florea]

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/81 (74%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 79  SPQSLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMV 137
           SP + G  RP L +L  SP VK+RSRH ARLNMG+ KDDIHVCILC+RAIMNNKYG NMV
Sbjct: 210 SPLNNGCLRPPLHELKDSPGVKRRSRHVARLNMGEAKDDIHVCILCMRAIMNNKYGFNMV 269

Query: 138 IKHTEAINSIALSLMHKSLRA 158
           I+H EAIN IALSLMHKSLR 
Sbjct: 270 IQHREAINCIALSLMHKSLRT 290

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857954|ref|XP_003704468.1| PREDICTED: formin-like protein CG32138-like [Megachile rotundata]

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 79  SPQSLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMV 137
           SP + G  RP + +L  SP VK+RSRH ARLNMG+ KDDIHVCILC+RAIMNNKYG NMV
Sbjct: 210 SPLNNGCLRPPIHELKDSPGVKRRSRHVARLNMGEAKDDIHVCILCMRAIMNNKYGFNMV 269

Query: 138 IKHTEAINSIALSLMHKSLRA 158
           I+H EAIN IALSLMHKSLR 
Sbjct: 270 IQHREAINCIALSLMHKSLRT 290

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187702|gb|EFN72674.1| Formin-like protein 2 [Camponotus floridanus]

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 63/76 (82%), Gaps = 1/76 (1%)

Query: 84  GHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTE 142
           G  RP L DL  SP VK+RSRH ARLNMG+ KDDIHVCILC+RAIMNNKYG NMVI+H E
Sbjct: 149 GCLRPPLHDLKDSPGVKRRSRHVARLNMGEAKDDIHVCILCMRAIMNNKYGFNMVIQHRE 208

Query: 143 AINSIALSLMHKSLRA 158
           AIN IALSL+HKSLR 
Sbjct: 209 AINCIALSLIHKSLRT 224

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307209921|gb|EFN86699.1| Formin-like protein 2 [Harpegnathos saltator]

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 79  SPQSLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMV 137
           SP + G  RP L +L  SP VK+RSRH ARLNMG+ KDDIHVCILC+RAIMNNKYG NMV
Sbjct: 136 SPLNNGCLRPPLHELKDSPGVKRRSRHVARLNMGEAKDDIHVCILCMRAIMNNKYGFNMV 195

Query: 138 IKHTEAINSIALSLMHKSLRA 158
           I+H EAIN IALSL+HKSLR 
Sbjct: 196 IQHREAINCIALSLIHKSLRT 216

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023967|gb|EGI64185.1| Formin-like protein [Acromyrmex echinatior]

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 79  SPQSLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMV 137
           SP + G  RP L +L  SP VK+RSRH ARLNMG+ KDDIHVCILC+RAIMNNKYG NMV
Sbjct: 209 SPLNNGCLRPPLHELKDSPGVKRRSRHVARLNMGEAKDDIHVCILCMRAIMNNKYGFNMV 268

Query: 138 IKHTEAINSIALSLMHKSLRA 158
           I+H EAIN IALSL+HKSLR 
Sbjct: 269 IQHREAINCIALSLIHKSLRT 289

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123018|ref|XP_001659985.1| hypothetical protein AaeL_AAEL009371 [Aedes aegypti] gi|108874545|gb|EAT38770.1| AAEL009371-PA, partial [Aedes aegypti]

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/117 (53%), Positives = 77/117 (65%), Gaps = 15/117 (12%)

Query: 53  EEEEEEEEEEEEEGLPASTNPPANVISPQ----------SLGHQRPSL-DLASSPSVKKR 101
           E+  +E + E +EGL    NP    I+            + G  RP L D+  SPS+K+R
Sbjct: 57  EQRIQEAKSESDEGL----NPKDTTIASYGSNETNHKLGTNGFMRPGLGDMMDSPSIKRR 112

Query: 102 SRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           SRH A+LNMG   DDIHVCI+C+RAIMNNKYG NMVI+H EAIN IALSL+HKSLR 
Sbjct: 113 SRHIAKLNMGLTTDDIHVCIMCMRAIMNNKYGFNMVIQHREAINCIALSLIHKSLRT 169

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158297823|ref|XP_001689075.1| AGAP004805-PB [Anopheles gambiae str. PEST] gi|157014512|gb|EDO63492.1| AGAP004805-PB [Anopheles gambiae str. PEST]

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 76/115 (66%), Gaps = 3/115 (2%)

Query: 45  ERTEEEGGEEEEEEEEEEEEEGLPASTNPPANVISPQSLGHQRPSL-DLASSPSVKKRSR 103
           +R  E   E +E    +E        +N   + I+P   G  RP L D+  SPS+K+RSR
Sbjct: 225 QRILEAKSESDEGLTTKETAANSSYGSNETNHKIAPN--GFMRPGLGDMLDSPSIKRRSR 282

Query: 104 HAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           H A+LNMG   DDIHVCI+C+RAIMNNKYG NMVI+H EAIN IALSL+HKSLR 
Sbjct: 283 HIAKLNMGLTTDDIHVCIMCMRAIMNNKYGFNMVIQHREAINCIALSLIHKSLRT 337

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
FB|FBgn0052138	1183	CG32138 [Drosophila melanogast	0.463	0.064	0.701	5.7e-22
UNIPROTKB|I3LNJ2	995	FMNL2 "Uncharacterized protein	0.530	0.087	0.450	2.1e-11
UNIPROTKB|I3LDA1	1046	FMNL2 "Uncharacterized protein	0.530	0.083	0.450	2.2e-11
UNIPROTKB|F1RQH3	1047	FMNL2 "Uncharacterized protein	0.530	0.083	0.450	2.2e-11
UNIPROTKB|I3LQV1	771	LOC100738191 "Uncharacterized	0.512	0.108	0.454	2.4e-11
UNIPROTKB|I3LS77	929	LOC100738191 "Uncharacterized	0.512	0.090	0.454	3.1e-11
UNIPROTKB|F1NQH1	1001	FMNL2 "Uncharacterized protein	0.530	0.086	0.439	4.4e-11
UNIPROTKB|F1NCE4	1051	FMNL2 "Uncharacterized protein	0.530	0.082	0.439	4.7e-11
UNIPROTKB|E1BB06	1047	FMNL2 "Uncharacterized protein	0.530	0.083	0.439	6e-11
UNIPROTKB|Q96PY5	1086	FMNL2 "Formin-like protein 2"	0.530	0.080	0.439	6.2e-11

FB|FBgn0052138 CG32138 [Drosophila melanogaster (taxid:7227)]

 Score = 269 (99.8 bits), Expect = 5.7e-22, P = 5.7e-22
 Identities = 54/77 (70%), Positives = 62/77 (80%)

Query:    82 SLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKH 140
             S G  RP++ D   SPS+K+RSRH A+LNMG   DDIHV I+CLRAIMNNKYG NMVI+H
Sbjct:   281 SYGFLRPTIADALDSPSLKRRSRHIAKLNMGAATDDIHVSIMCLRAIMNNKYGFNMVIQH 340

Query:   141 TEAINSIALSLMHKSLR 157
              EAIN IALSL+HKSLR
Sbjct:   341 REAINCIALSLIHKSLR 357

GO:0003779 "actin binding" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0048812 "neuron projection morphogenesis" evidence=IMP

UNIPROTKB|I3LNJ2 FMNL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 169 (64.5 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query:    67 LPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRA 126
             L   +N P+ V S  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CLRA
Sbjct:   134 LHRGSNLPSPVGSSASRSGRHSALRYNTLPS--RRTLKNSRLV--SKKDDVHVCIMCLRA 189

Query:   127 IMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
             IMN +YG NMV+ H  A+N IALSL +K+ R
Sbjct:   190 IMNYQYGFNMVMSHPHAVNEIALSLNNKNPR 220

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|I3LDA1 FMNL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 169 (64.5 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query:    67 LPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRA 126
             L   +N P+ V S  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CLRA
Sbjct:   134 LHRGSNLPSPVGSSASRSGRHSALRYNTLPS--RRTLKNSRLV--SKKDDVHVCIMCLRA 189

Query:   127 IMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
             IMN +YG NMV+ H  A+N IALSL +K+ R
Sbjct:   190 IMNYQYGFNMVMSHPHAVNEIALSLNNKNPR 220

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|F1RQH3 FMNL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 169 (64.5 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query:    67 LPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRA 126
             L   +N P+ V S  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CLRA
Sbjct:   134 LHRGSNLPSPVGSSASRSGRHSALRYNTLPS--RRTLKNSRLV--SKKDDVHVCIMCLRA 189

Query:   127 IMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
             IMN +YG NMV+ H  A+N IALSL +K+ R
Sbjct:   190 IMNYQYGFNMVMSHPHAVNEIALSLNNKNPR 220

GO:0030866 "cortical actin cytoskeleton organization" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|I3LQV1 LOC100738191 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 167 (63.8 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 40/88 (45%), Positives = 53/88 (60%)

Query:    73 PPANVISP--QSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNN 130
             PP+ + +P   SL        L  S    +R+   +RL     KDD+HVCILCLRAIMN 
Sbjct:   143 PPSALSAPFTNSLARSARQSVLRYSTLPGRRALKNSRLV--SQKDDVHVCILCLRAIMNY 200

Query:   131 KYGLNMVIKHTEAINSIALSLMHKSLRA 158
             +YG N+V+ H  A+N IALSL +K+ RA
Sbjct:   201 QYGFNLVMSHPHAVNEIALSLNNKNPRA 228

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|I3LS77 LOC100738191 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 167 (63.8 bits), Expect = 3.1e-11, P = 3.1e-11
 Identities = 40/88 (45%), Positives = 53/88 (60%)

Query:    73 PPANVISP--QSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNN 130
             PP+ + +P   SL        L  S    +R+   +RL     KDD+HVCILCLRAIMN 
Sbjct:   143 PPSALSAPFTNSLARSARQSVLRYSTLPGRRALKNSRLV--SQKDDVHVCILCLRAIMNY 200

Query:   131 KYGLNMVIKHTEAINSIALSLMHKSLRA 158
             +YG N+V+ H  A+N IALSL +K+ RA
Sbjct:   201 QYGFNLVMSHPHAVNEIALSLNNKNPRA 228

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|F1NQH1 FMNL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 4.4e-11, P = 4.4e-11
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query:    67 LPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRA 126
             L   +N P+ V +  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CLRA
Sbjct:   166 LHRGSNLPSPVGNSASRSGRHSTLRYNTLPS--RRTLKNSRLV--SKKDDVHVCIMCLRA 221

Query:   127 IMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
             IMN +YG NMV+ H  A+N IALSL +K+ R
Sbjct:   222 IMNYQYGFNMVMSHPHAVNEIALSLNNKNPR 252

GO:0003779 "actin binding" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|F1NCE4 FMNL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query:    67 LPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRA 126
             L   +N P+ V +  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CLRA
Sbjct:   136 LHRGSNLPSPVGNSASRSGRHSTLRYNTLPS--RRTLKNSRLV--SKKDDVHVCIMCLRA 191

Query:   127 IMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
             IMN +YG NMV+ H  A+N IALSL +K+ R
Sbjct:   192 IMNYQYGFNMVMSHPHAVNEIALSLNNKNPR 222

GO:0003779 "actin binding" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0030866 "cortical actin cytoskeleton organization" evidence=IEA

UNIPROTKB|E1BB06 FMNL2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 165 (63.1 bits), Expect = 6.0e-11, P = 6.0e-11
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query:    67 LPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRA 126
             L   +N P+ V +  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CLRA
Sbjct:   134 LHRGSNLPSPVGNSVSRSGRHSALRYNTLPS--RRTLKNSRLV--SKKDDVHVCIMCLRA 189

Query:   127 IMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
             IMN +YG NMV+ H  A+N IALSL +K+ R
Sbjct:   190 IMNYQYGFNMVMSHPHAVNEIALSLNNKNPR 220

GO:0030866 "cortical actin cytoskeleton organization" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|Q96PY5 FMNL2 "Formin-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 165 (63.1 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query:    67 LPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRA 126
             L   +N P+ V +  S   +  +L   + PS  +R+   +RL     KDD+HVCI+CLRA
Sbjct:   175 LHRGSNLPSPVGNSVSRSGRHSALRYNTLPS--RRTLKNSRLV--SKKDDVHVCIMCLRA 230

Query:   127 IMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
             IMN +YG NMV+ H  A+N IALSL +K+ R
Sbjct:   231 IMNYQYGFNMVMSHPHAVNEIALSLNNKNPR 261

GO:0003779 "actin binding" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IMP

GO:0022604 "regulation of cell morphogenesis" evidence=IMP

GO:0030866 "cortical actin cytoskeleton organization" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VUC6	Y2138_DROME	No assigned EC number	0.6923	0.4695	0.0650	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	164
pfam06371	187	pfam06371, Drf_GBD, Diaphanous GTPase-binding Doma	3e-08
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	4e-05
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	4e-04
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	7e-04
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	0.002
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	0.002
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	0.002
pfam06658	142	pfam06658, DUF1168, Protein of unknown function (D	0.002
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	0.004
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	0.004
pfam12794	339	pfam12794, MscS_TM, Mechanosensitive ion channel i	0.004

>gnl|CDD|219001 pfam06371, Drf_GBD, Diaphanous GTPase-binding Domain

 Score = 50.4 bits (121), Expect = 3e-08
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 106 ARLNMGDPKDDIHV-CILCLRAIMNNKYGLNMVIKHTEAINSIALSLM 152
            + +  D   D     + CL+A+MNNK+G++ V+ H E I  +A SL 
Sbjct: 121 RKKSESDEDLDREYEILKCLKALMNNKFGIDHVLGHPEVILLLARSLD 168

This domain is bound to by GTP-attached Rho proteins, leading to activation of the Drf protein. Length = 187

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 17  EEEEVKGQRKKAEEKKKKKRRAEGRGGG-----ERTEEEGGEEEEEEEEEEEEEGLPAST 71
           E  E +   +   E K+ ++  +G GG      E  EEE  EEEEEEEEEEEEE      
Sbjct: 831 ETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEEN 890

Query: 72  NPPANVISPQSLGHQ 86
             P ++  P++   Q
Sbjct: 891 EEPLSLEWPETRQKQ 905

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 25/55 (45%), Positives = 33/55 (60%)

Query: 12  ERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEEG 66
           + + K EEE K ++KKA   KKK+   E     +  E+E  EEE EEE+EEEEE 
Sbjct: 418 KAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEEEEEK 472

Length = 482

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 22/55 (40%), Positives = 35/55 (63%)

Query: 12  ERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEEG 66
           E+K +EE++ K ++  A +KK+++   E     E  EEE  E EEE+EEEEE++ 
Sbjct: 420 EKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEEEEEKKK 474

Length = 482

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 22/52 (42%), Positives = 35/52 (67%)

Query: 14  KLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEE 65
           K+K+  E   ++++ E+K+KKK+   G+   E  EEE  ++EEE+EEEEEE 
Sbjct: 411 KIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEA 462

Length = 482

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 17/54 (31%), Positives = 31/54 (57%)

Query: 12  ERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEE 65
             +  E++  + +++K ++    K++ E     +  +EE  EEEEEE EEE+EE
Sbjct: 415 IVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEE 468

Length = 482

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 14  KLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEEGLPASTNP 73
           K  ++   K ++K+ EEKK+KK++A      E  EEE  E++EEE+EEEEEE        
Sbjct: 410 KKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEEE 469

Query: 74  P 74
            
Sbjct: 470 E 470

Length = 482

>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168)

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query: 12  ERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEEGLPAST 71
           E+K K+EE+   +R K ++KK+KK++ +    G + EE+ G +  EE  +EEEEG     
Sbjct: 74  EKKRKDEEKTAKKRAKRQKKKQKKKKKKKAKKGNKKEEKEGSKSSEESSDEEEEGEEDKQ 133

Query: 72  NPP 74
             P
Sbjct: 134 EEP 136

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 142

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 21/48 (43%), Positives = 29/48 (60%)

Query: 18  EEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEE 65
           ++E   Q   AE + + K+  +G  GG  ++    EEEEEEEEEEEEE
Sbjct: 829 KDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEE 876

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 36.4 bits (85), Expect = 0.004
 Identities = 16/51 (31%), Positives = 35/51 (68%)

Query: 16  KEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEEG 66
           K  +++K   +KAE+K++++++ + +      ++E  EEEE+E++EEE+E 
Sbjct: 407 KATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEE 457

Length = 482

>gnl|CDD|221775 pfam12794, MscS_TM, Mechanosensitive ion channel inner membrane domain 1

 Score = 36.0 bits (84), Expect = 0.004
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 10/61 (16%)

Query: 24  QRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEEGLPASTNPPANVISPQSL 83
           +R+ A E+ K KR        E  EEE   E   E  EE E  L   T      IS QSL
Sbjct: 255 RRRLAYERAKAKRAEILAQRAE--EEEESSEGAAETIEEPELDL--ET------ISAQSL 304

Query: 84  G 84
            
Sbjct: 305 R 305

The small mechanosensitive channel, MscS, is a part of the turgor-driven solute efflux system that protects bacteria from lysis in the event of osmotic shock. The MscS protein alone is sufficient to form a functional mechanosensitive channel gated directly by tension in the lipid bilayer. The MscS proteins are heptamers of three transmembrane subunits with seven converging M3 domains, and this domain is one of the inner membrane domains. Length = 339

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
PF06371	187	Drf_GBD: Diaphanous GTPase-binding Domain; InterPr	99.41
KOG1924|consensus	1102		98.62

>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division []

Probab=99.41  E-value=8.7e-14  Score=104.90  Aligned_cols=53  Identities=38%  Similarity=0.689  Sum_probs=47.8

Q ss_pred             CCCCcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591        111 GDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF  163 (164)
Q Consensus       111 ~s~kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL  163 (164)
                      ..+.+.+|+|++|||||||+++|+..|+.|+.+|..|+.||++++++||.+|+
T Consensus       127 ~~~~~~~~~~l~Clkal~n~~~G~~~v~~~~~~v~~i~~~L~s~~~~~r~~~l  179 (187)
T PF06371_consen  127 EEDIDIEHECLRCLKALMNTKYGLEAVLSHPDSVNLIALSLDSPNIKTRKLAL  179 (187)
T ss_dssp             TTCHHHHHHHHHHHHHHTSSHHHHHHHHCSSSHHHHHHHT--TTSHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHccHHHHHHHHcCcHHHHHHHHHHCCCCHHHHHHHH
Confidence            45567899999999999999999999999999999999999999999999885

Drf proteins are characterised by a variety of shared domains: an N-terminal GTPase-binding domain (GBD), formin-homology domains FH1, FH2 (IPR003104 from INTERPRO) and FH3 (IPR010472 from INTERPRO), and a C-terminal conserved Dia-autoregulatory domain (DAD) that binds the GBD. This entry represents the GBD, which is a bifunctional autoinhibitory domain that interacts with and is regulated by activated Rho family members. Mammalian Drf3 contains a CRIB-like motif within its GBD for binding to Cdc42, which is required for Cdc42 to activate and guide Drf3 towards the cell cortex where it remodels the actin skeleton [].; GO: 0003779 actin binding, 0017048 Rho GTPase binding, 0030036 actin cytoskeleton organization; PDB: 3OBV_A 2BNX_A 3EG5_D 2BAP_B 3O4X_B 1Z2C_B 2F31_A.

>KOG1924|consensus

Probab=98.62  E-value=7e-09  Score=101.12  Aligned_cols=51  Identities=25%  Similarity=0.389  Sum_probs=47.7

Q ss_pred             CCcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591        113 PKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF  163 (164)
Q Consensus       113 ~kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL  163 (164)
                      ..+.+|++|+||||||||+||+..||...+++.++|++||+..|.+++-|+
T Consensus       205 ~~k~~~eiIrClka~mNn~~Gl~~vL~~e~~lllla~aldpr~pnmm~dvv  255 (1102)
T KOG1924|consen  205 DIKNLQEIIRCLKAFMNNKFGLVLVLRRERSLLLLARALDPREPNMMTDVV  255 (1102)
T ss_pred             HHHHHHHHHHHHHHHhccccceeeeecCCccHHHHHHhcCccCccHHHHHH
Confidence            788999999999999999999999999999999999999999999887553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	164
2f31_A	233	Diaphanous protein homolog 1; formin,MDIA1, protei	5e-09
3eg5_B	383	Protein diaphanous homolog 1; protein-protein comp	6e-07
2bnx_A	386	Diaphanous protein homolog 1; autoinhibition, acti	6e-06
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	3e-04

>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus} Length = 233

 Score = 52.5 bits (125), Expect = 5e-09
 Identities = 12/59 (20%), Positives = 24/59 (40%)

Query: 100 KRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
           +        +      + H  I CL+A MNNK+G+  +++  E I  +  ++       
Sbjct: 54  RLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNM 112

>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} PDB: 1z2c_B* Length = 383

 Score = 46.8 bits (110), Expect = 6e-07
 Identities = 12/58 (20%), Positives = 24/58 (41%)

Query: 100 KRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
           +        +      + H  I CL+A MNNK+G+  +++  E I  +  ++      
Sbjct: 120 RLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPN 177

>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B Length = 386

 Score = 44.1 bits (103), Expect = 6e-06
 Identities = 13/59 (22%), Positives = 25/59 (42%)

Query: 99  KKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
           K+        +      + H  I CL+A MNNK+G+  +++  E I  +  ++      
Sbjct: 57  KRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPN 115

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 38.6 bits (89), Expect = 3e-04
 Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 18/68 (26%)

Query: 13  RKLKEEEEVKGQRKKAEEKKKK---------------KRRAEGRGGGERTEEEGGEEEEE 57
           RK +EE+  + Q   A  K  +               +R++E     E+ +      ++ 
Sbjct: 88  RKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQV---EKNKINNRIADKA 144

Query: 58  EEEEEEEE 65
             ++ + +
Sbjct: 145 FYQQPDAD 152

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	164
2f31_A	233	Diaphanous protein homolog 1; formin,MDIA1, protei	99.46
3eg5_B	383	Protein diaphanous homolog 1; protein-protein comp	99.34
2bnx_A	386	Diaphanous protein homolog 1; autoinhibition, acti	99.34

>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}

Probab=99.46  E-value=1.1e-14  Score=115.87  Aligned_cols=51  Identities=24%  Similarity=0.363  Sum_probs=48.7

Q ss_pred             CCcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591        113 PKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF  163 (164)
Q Consensus       113 ~kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL  163 (164)
                      +.+.+|.||+||||||||++|++.|++|+++|+.||+||++++++||++|+
T Consensus        67 ~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~l  117 (233)
T 2f31_A           67 DSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA  117 (233)
T ss_dssp             HHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHH
Confidence            468899999999999999999999999999999999999999999999875

>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*

Probab=99.34  E-value=2e-13  Score=116.84  Aligned_cols=52  Identities=23%  Similarity=0.338  Sum_probs=48.5

Q ss_pred             CCCcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591        112 DPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF  163 (164)
Q Consensus       112 s~kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL  163 (164)
                      .+.+.+|.||+||||||||++|++.|++|+++|+.||+||++++++||++|+
T Consensus       132 ~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~al  183 (383)
T 3eg5_B          132 YDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA  183 (383)
T ss_dssp             -CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHH
Confidence            3568899999999999999999999999999999999999999999999875

>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B

Probab=99.34  E-value=2e-13  Score=116.70  Aligned_cols=51  Identities=24%  Similarity=0.363  Sum_probs=48.7

Q ss_pred             CCcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591        113 PKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF  163 (164)
Q Consensus       113 ~kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL  163 (164)
                      +.+.+|.||+||||||||++|++.|++|+.+|+.|++||++++++||++||
T Consensus        71 d~~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vl  121 (386)
T 2bnx_A           71 DSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA  121 (386)
T ss_dssp             HHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHH
Confidence            468899999999999999999999999999999999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	164
d2bnxa1	343	a.118.1.23 (A:133-475) Diaphanous protein homolog	1e-07

>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 343

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Diap1 N-terninal region-like
domain: Diaphanous protein homolog 1, Diap1 (Dia1, DRF1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 13/59 (22%), Positives = 25/59 (42%)

Query: 99  KKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
           K+        +      + H  I CL+A MNNK+G+  +++  E I  +  ++      
Sbjct: 55  KRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPN 113

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	164
d2bnxa1	343	Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {	99.21

>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Diap1 N-terninal region-like
domain: Diaphanous protein homolog 1, Diap1 (Dia1, DRF1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.2e-12  Score=107.96  Aligned_cols=50  Identities=24%  Similarity=0.375  Sum_probs=47.6

Q ss_pred             CcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591        114 KDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF  163 (164)
Q Consensus       114 kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL  163 (164)
                      .+.+|+||+|||||||+++|++.|+.|+.+|+.|++||++++++||.+|+
T Consensus        70 ~~~e~e~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~tr~~a~  119 (343)
T d2bnxa1          70 SRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA  119 (343)
T ss_dssp             HHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHHHcChHHHHHHHHccCCCchHHHHHHH
Confidence            46899999999999999999999999999999999999999999999874