Psyllid ID: psy14617

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MKFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEccHHHHHHHHHHHHccHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHcccccEEEEEccccEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEEcHHHHHHHHHHHHHccHHHHHHcEEEEEEcccccccccHHHHHHHHHHHHHHccHHHccEEEcccccccEEEcHHHcccccccc
Coil and Loop (DISEMBL)
mkflkggtqprdlslnIRRDHLLEDAFNKIMLASKKDLAKCKLYaqfdsedgldyggpsREFFFLLSRQlfnpyyglfeysandtytvqispmsafvdnyhe
Flexible Loop (DISEMBL)
mkflkggtqprdlslniRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE
Low Complexity Region (SEG)
MKFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE
Disordered region (IsUnstruct)
**************LNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFV*****
Disordered Region (DISOPRED)
***************NIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMS********
Disordered Region (DISEMBL)
********QPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE
Disordered Region (DISPRO)
****KGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFV*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
Q9P2P5	1572	E3 ubiquitin-protein liga	yes	N/A	0.941	0.061	0.770	2e-38
Q6I6G8	1578	E3 ubiquitin-protein liga	yes	N/A	0.941	0.060	0.770	3e-38
Q76N89	1606	E3 ubiquitin-protein liga	no	N/A	0.941	0.059	0.697	3e-34
Q8K4P8	1604	E3 ubiquitin-protein liga	no	N/A	0.941	0.059	0.708	4e-34
P46935	887	E3 ubiquitin-protein liga	no	N/A	0.901	0.103	0.510	1e-24
P46934	1319	E3 ubiquitin-protein liga	no	N/A	0.980	0.075	0.48	9e-24
Q8CFI0	1004	E3 ubiquitin-protein liga	no	N/A	0.980	0.099	0.46	2e-23
Q5RBF2	959	E3 ubiquitin-protein liga	no	N/A	0.980	0.104	0.46	2e-23
Q96PU5	975	E3 ubiquitin-protein liga	no	N/A	0.980	0.102	0.46	2e-23
Q62940	887	E3 ubiquitin-protein liga	no	N/A	0.901	0.103	0.494	1e-22

>sp|Q9P2P5|HECW2_HUMAN E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens GN=HECW2 PE=1 SV=2

 Score =  157 bits (396), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/96 (77%), Positives = 81/96 (84%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFFFL+
Sbjct: 1210 GQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLV 1269

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct: 1270 SRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1305

E3 ubiquitin-protein ligase that mediates ubiquitination of TP73. Acts to stabilize TP73 and enhance activation of transcription by TP73.
Homo sapiens (taxid: 9606)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|Q6I6G8|HECW2_MOUSE E3 ubiquitin-protein ligase HECW2 OS=Mus musculus GN=Hecw2 PE=2 SV=1

 Score =  157 bits (396), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/96 (77%), Positives = 81/96 (84%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFFFL+
Sbjct: 1216 GQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLV 1275

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct: 1276 SRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1311

E3 ubiquitin-protein ligase that mediates ubiquitination of TP73. Acts to stabilize TP73 and enhance activation of transcription by TP73.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q76N89|HECW1_HUMAN E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens GN=HECW1 PE=1 SV=3

 Score =  143 bits (361), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/96 (69%), Positives = 78/96 (81%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  + L IRRDHLLE  FN++M  S+K+L + KLY  F  E+GLDY GPSREFFFLL
Sbjct: 1244 GQGPGKIKLIIRRDHLLEGTFNQVMAYSRKELQRNKLYVTFVGEEGLDYSGPSREFFFLL 1303

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            S++LFNPYYGLFEYSANDTYTVQISPMSAFV+N+ E
Sbjct: 1304 SQELFNPYYGLFEYSANDTYTVQISPMSAFVENHLE 1339

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent degradation of DVL1. Also targets the mutant SOD1 protein involved in familial amyotrophic lateral sclerosis (FALS). Forms cytotoxic aggregates with DVL1, SSR3 and mutant SOD1 that lead to motor neuron death in FALS.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q8K4P8|HECW1_MOUSE E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=3

 Score =  143 bits (360), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 78/96 (81%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  + L IRRDHLLE  FN++M  S+K+L + KLY  F  E+GLDY GPSREFFFLL
Sbjct: 1242 GQGPGKIKLIIRRDHLLEGTFNQVMAYSRKELQRNKLYITFVGEEGLDYSGPSREFFFLL 1301

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            S++LFNPYYGLFEYSANDTYTVQISPMSAFV+NY E
Sbjct: 1302 SQELFNPYYGLFEYSANDTYTVQISPMSAFVENYLE 1337

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent degradation of DVL1.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|P46935|NEDD4_MOUSE E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1 SV=3

 Score =  111 bits (277), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/92 (51%), Positives = 67/92 (72%)

Query: 10  PRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQ 69
           P    + +RR ++LED++ +IM   + DL K +L+ +FD E GLDYGG +RE+FFL+S++
Sbjct: 527 PNKFEMKLRRANILEDSYRRIMGVKRADLLKARLWIEFDGEKGLDYGGVAREWFFLISKE 586

Query: 70  LFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           +FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 587 MFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 618

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Monoubiquitinates IGF1R at multiple sites, thus leading to receptor internalization and degradation in lysosomes. Ubiquitinates FGFR1, leading to receptor internalization and degradation in lysosomes. Involved in ubiquitination of ERBB4 intracellular domain E4ICD1 (PubMed:19193720). Predominantly involved in ubiquitination of membrane bound forms of ERBB4 rather than processed precursors and intermediate membrane-anchored 80 kDa fragments (m80HER4), with a lesser role in ubiquitination of ERBB4 intracellular domain E4ICD1 (PubMed:19047365). Involved in the pathway leading to the degradation of VEGFR-2/KDFR, independently of its ubiquitin-ligase activity. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. Ubiquitinates TNK2 and regulates EGF-induced degradation of EGFR and TNF2.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|P46934|NEDD4_HUMAN E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens GN=NEDD4 PE=1 SV=4

 Score =  108 bits (270), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 67/100 (67%)

Query: 2    KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
            K  K    P    + +RR  +LED++ +IM   + D  K +L+ +FD E GLDYGG +RE
Sbjct: 951  KLKKQNDIPNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVARE 1010

Query: 62   FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
            +FFL+S+++FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 1011 WFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 1050

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in the pathway leading to the degradation of VEGFR-2/KDFR, independently of its ubiquitin-ligase activity. Monoubiquitinates IGF1R at multiple sites, thus leading to receptor internalization and degradation in lysosomes. Ubiquitinates FGFR1, leading to receptor internalization and degradation in lysosomes. According to PubMed:18562292 the direct link between NEDD4 and PTEN regulation through polyubiquitination described in PubMed:17218260 is questionable. Involved in ubiquitination of ERBB4 intracellular domain E4ICD. Involved in the budding of many viruses. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. Ubiquitinates TNK2 and regulates EGF-induced degradation of EGFR and TNF2.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q8CFI0|NED4L_MOUSE E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus GN=Nedd4l PE=1 SV=2

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 69/100 (69%)

Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
           K  K    P    + + R+++ E+++ +IM   + D+ K +L+ +F+SE GLDYGG +RE
Sbjct: 636 KLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVARE 695

Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           +FFLLS+++FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 696 WFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 735

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Inhibits TGF-beta signaling by triggering SMAD2 and TGFBR1 ubiquitination and proteasome-dependent degradation. Promotes ubiquitination and internalization of various plasma membrane channels such as ENaC, Nav1.2, Nav1.3, Nav1.5, Nav1.7, Nav1.8, Kv1.3, EAAT1 or CLC5. Promotes ubiquitination and degradation of SGK1 and TNK2.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q5RBF2|NED4L_PONAB E3 ubiquitin-protein ligase NEDD4-like OS=Pongo abelii GN=NEDD4L PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 69/100 (69%)

Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
           K  K    P    + + R+++ E+++ +IM   + D+ K +L+ +F+SE GLDYGG +RE
Sbjct: 591 KLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVARE 650

Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           +FFLLS+++FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 651 WFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 690

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Inhibits TGF-beta signaling by triggering SMAD2 and TGFBR1 ubiquitination and proteasome-dependent degradation. Promotes ubiquitination and internalization of various plasma membrane channels such as ENaC, Nav1.2, Nav1.3, Nav1.5, Nav1.7, Nav1.8, Kv1.3, EAAT1 or CLC5. Promotes ubiquitination and degradation of SGK1 and TNK2.

Pongo abelii (taxid: 9601)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q96PU5|NED4L_HUMAN E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 69/100 (69%)

Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
           K  K    P    + + R+++ E+++ +IM   + D+ K +L+ +F+SE GLDYGG +RE
Sbjct: 607 KLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVARE 666

Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           +FFLLS+++FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 667 WFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 706

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Inhibits TGF-beta signaling by triggering SMAD2 and TGFBR1 ubiquitination and proteasome-dependent degradation. Promotes ubiquitination and internalization of various plasma membrane channels such as ENaC, Nav1.2, Nav1.3, Nav1.5, Nav1.7, Nav1.8, Kv1.3, EAAT1 or CLC5. Promotes ubiquitination and degradation of SGK1 and TNK2.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q62940|NEDD4_RAT E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus GN=Nedd4 PE=1 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/93 (49%), Positives = 66/93 (70%), Gaps = 1/93 (1%)

Query: 10  PRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQ 69
           P    + +RR ++LED++ +IM   + D  K +L+ +FD E GLDYGG +RE+FFL+S++
Sbjct: 526 PNKFEMKLRRANILEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISKE 585

Query: 70  LFNPYYGLFEYSAN-DTYTVQISPMSAFVDNYH 101
           +FNPYYGLFEYSA  D YT+QI+P S   +  H
Sbjct: 586 MFNPYYGLFEYSATEDNYTLQINPNSGLCNEDH 618

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Monoubiquitinates IGF1R at multiple sites, thus leading to receptor internalization and degradation in lysosomes. Ubiquitinates FGFR1, leading to receptor internalization and degradation in lysosomes. Involved in the pathway leading to the degradation of VEGFR-2/KDFR, independently of its ubiquitin-ligase activity. Is involved in ubiquitination of ERBB4 intracellular domain E4ICD. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. Ubiquitinates TNK2 and regulates EGF-induced degradation of EGFR and TNF2.

Rattus norvegicus (taxid: 10116)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
241606637	1531	E3 ubiquitin ligase, putative [Ixodes sc	0.941	0.062	0.802	6e-40
427793087	1612	Putative e3 ubiquitin-protein lig, parti	0.941	0.059	0.802	1e-39
391346159	1657	PREDICTED: E3 ubiquitin-protein ligase H	0.941	0.057	0.812	1e-39
427797509	1632	Putative e3 ubiquitin-protein lig, parti	0.941	0.058	0.802	2e-39
47219212	1361	unnamed protein product [Tetraodon nigro	0.941	0.070	0.770	3e-38
383853892	1261	PREDICTED: E3 ubiquitin-protein ligase H	0.941	0.076	0.781	3e-38
307207975	1376	E3 ubiquitin-protein ligase HECW2 [Harpe	0.941	0.069	0.791	3e-38
410906233	1520	PREDICTED: E3 ubiquitin-protein ligase H	0.941	0.063	0.770	4e-38
348541895	1521	PREDICTED: E3 ubiquitin-protein ligase H	0.941	0.063	0.770	4e-38
432933784	1513	PREDICTED: E3 ubiquitin-protein ligase H	0.941	0.063	0.770	5e-38

>gi|241606637|ref|XP_002406278.1| E3 ubiquitin ligase, putative [Ixodes scapularis] gi|215502642|gb|EEC12136.1| E3 ubiquitin ligase, putative [Ixodes scapularis]

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 77/96 (80%), Positives = 82/96 (85%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  L LNIRRDHLLEDAF KIM ASKKDL K +LY  F  E+GLDYGGPSREFFFLL
Sbjct: 1168 GQGPSKLKLNIRRDHLLEDAFTKIMAASKKDLQKSRLYIGFAGEEGLDYGGPSREFFFLL 1227

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQ+SPM+AFVDN HE
Sbjct: 1228 SRELFNPYYGLFEYSANDTYTVQVSPMAAFVDNQHE 1263

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427793087|gb|JAA61995.1| Putative e3 ubiquitin-protein lig, partial [Rhipicephalus pulchellus]

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/96 (80%), Positives = 82/96 (85%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  L LNIRRDHLLEDAF KIM ASKKDL K +LY  F  E+GLDYGGPSREFFFLL
Sbjct: 1249 GQGPSKLKLNIRRDHLLEDAFTKIMAASKKDLQKSRLYIGFAGEEGLDYGGPSREFFFLL 1308

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQ+SPM+AFVDN HE
Sbjct: 1309 SRELFNPYYGLFEYSANDTYTVQVSPMAAFVDNQHE 1344

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391346159|ref|XP_003747346.1| PREDICTED: E3 ubiquitin-protein ligase HECW1-like [Metaseiulus occidentalis]

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 78/96 (81%), Positives = 83/96 (86%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  L LNIRRDH+LEDAFNKIM ASKKDL K +LY  F  E+GLDYGGPSREFFFLL
Sbjct: 1294 GQGPSKLKLNIRRDHVLEDAFNKIMAASKKDLQKSRLYIGFAGEEGLDYGGPSREFFFLL 1353

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQ+SPMSAFVDN HE
Sbjct: 1354 SRELFNPYYGLFEYSANDTYTVQVSPMSAFVDNQHE 1389

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427797509|gb|JAA64206.1| Putative e3 ubiquitin-protein lig, partial [Rhipicephalus pulchellus]

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/96 (80%), Positives = 82/96 (85%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  L LNIRRDHLLEDAF KIM ASKKDL K +LY  F  E+GLDYGGPSREFFFLL
Sbjct: 1269 GQGPSKLKLNIRRDHLLEDAFTKIMAASKKDLQKSRLYIGFAGEEGLDYGGPSREFFFLL 1328

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQ+SPM+AFVDN HE
Sbjct: 1329 SRELFNPYYGLFEYSANDTYTVQVSPMAAFVDNQHE 1364

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47219212|emb|CAG11230.1| unnamed protein product [Tetraodon nigroviridis]

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/96 (77%), Positives = 81/96 (84%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  + L IRRDHLLEDAFN+IM  S+KDL + KLY  F  EDGLDY GPSREFFFL+
Sbjct: 999  GQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSFMGEDGLDYSGPSREFFFLV 1058

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct: 1059 SRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1094

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|383853892|ref|XP_003702456.1| PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Megachile rotundata]

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 75/96 (78%), Positives = 82/96 (85%)

Query: 7   GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
           G  P  L L+IRR+HLLEDAF +IM ASKKDL K KL   FD E+GLDYGGPSREFFF L
Sbjct: 898 GQGPGKLKLHIRREHLLEDAFTRIMAASKKDLQKGKLVVMFDHEEGLDYGGPSREFFFHL 957

Query: 67  SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
           SR+LFNPYYGLFEYSANDTYTVQ+SPMSAFVDNYH+
Sbjct: 958 SRELFNPYYGLFEYSANDTYTVQVSPMSAFVDNYHD 993

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207975|gb|EFN85534.1| E3 ubiquitin-protein ligase HECW2 [Harpegnathos saltator]

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 76/96 (79%), Positives = 82/96 (85%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  L L+IRR+HLLEDAF +IM ASKKDL K KL   FD E+GLDYGGPSREFFF L
Sbjct: 1013 GQGPGKLKLHIRREHLLEDAFTRIMAASKKDLQKGKLVVIFDHEEGLDYGGPSREFFFHL 1072

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDNYH+
Sbjct: 1073 SRELFNPYYGLFEYSANDTYTVQISPMSAFVDNYHD 1108

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|410906233|ref|XP_003966596.1| PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Takifugu rubripes]

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 74/96 (77%), Positives = 81/96 (84%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFFFL+
Sbjct: 1158 GQGPGKLKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSFVGEEGLDYSGPSREFFFLV 1217

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct: 1218 SRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1253

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348541895|ref|XP_003458422.1| PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Oreochromis niloticus]

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 74/96 (77%), Positives = 81/96 (84%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  + L IRRDHLLEDAFN+IM  S+KDL + KLY  F  EDGLDY GPSREFFFL+
Sbjct: 1159 GQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSFVGEDGLDYSGPSREFFFLV 1218

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct: 1219 SRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1254

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432933784|ref|XP_004081880.1| PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Oryzias latipes]

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/96 (77%), Positives = 81/96 (84%)

Query: 7    GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLL 66
            G  P  + L IRRDHLLEDAFN+IM  S+KDL + KLY  F  EDGLDY GPSREFFFL+
Sbjct: 1151 GQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSFVGEDGLDYSGPSREFFFLV 1210

Query: 67   SRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
            SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct: 1211 SRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1246

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
UNIPROTKB|I3L5X8	366	LOC100738946 "Uncharacterized	0.960	0.267	0.767	1.2e-35
UNIPROTKB|F1PQF5	1263	HECW2 "Uncharacterized protein	0.960	0.077	0.767	2.6e-34
UNIPROTKB|G3MXP2	1368	G3MXP2 "Uncharacterized protei	0.960	0.071	0.767	3e-34
ZFIN|ZDB-GENE-090311-22	1411	hecw2a "HECT, C2 and WW domain	0.960	0.069	0.747	3.1e-34
UNIPROTKB|J9NSV9	1432	HECW2 "Uncharacterized protein	0.960	0.068	0.767	3.2e-34
UNIPROTKB|F1N645	1434	F1N645 "Uncharacterized protei	0.960	0.068	0.767	3.2e-34
UNIPROTKB|Q9P2P5	1572	HECW2 "E3 ubiquitin-protein li	0.960	0.062	0.767	3.7e-34
UNIPROTKB|F1NTZ8	1576	HECW2 "Uncharacterized protein	0.960	0.062	0.767	3.7e-34
MGI|MGI:2685817	1578	Hecw2 "HECT, C2 and WW domain	0.960	0.062	0.767	3.7e-34
RGD|1593244	1578	Hecw2 "HECT, C2 and WW domain	0.960	0.062	0.767	3.7e-34

UNIPROTKB|I3L5X8 LOC100738946 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:    71 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 130

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:   131 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 169

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|F1PQF5 HECW2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 385 (140.6 bits), Expect = 2.6e-34, P = 2.6e-34
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:   898 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 957

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:   958 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 996

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|G3MXP2 G3MXP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 385 (140.6 bits), Expect = 3.0e-34, P = 3.0e-34
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:  1003 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 1062

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:  1063 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1101

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

ZFIN|ZDB-GENE-090311-22 hecw2a "HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a" [Danio rerio (taxid:7955)]

 Score = 385 (140.6 bits), Expect = 3.1e-34, P = 3.1e-34
 Identities = 74/99 (74%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  + L IRRDHLLEDAFN+IM  S+KDL + +LY  F  E+GLDY GPSREFF
Sbjct:  1046 KGYGQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQRSRLYVSFVGEEGLDYSGPSREFF 1105

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:  1106 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1144

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006464 "cellular protein modification process" evidence=IEA

UNIPROTKB|J9NSV9 HECW2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 385 (140.6 bits), Expect = 3.2e-34, P = 3.2e-34
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:  1067 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 1126

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:  1127 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1165

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|F1N645 F1N645 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 385 (140.6 bits), Expect = 3.2e-34, P = 3.2e-34
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:  1069 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 1128

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:  1129 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1167

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|Q9P2P5 HECW2 "E3 ubiquitin-protein ligase HECW2" [Homo sapiens (taxid:9606)]

 Score = 385 (140.6 bits), Expect = 3.7e-34, P = 3.7e-34
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:  1207 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 1266

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:  1267 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1305

GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA

GO:0005634 "nucleus" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0042787 "protein ubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IBA

UNIPROTKB|F1NTZ8 HECW2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 385 (140.6 bits), Expect = 3.7e-34, P = 3.7e-34
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:  1211 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 1270

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:  1271 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1309

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:2685817 Hecw2 "HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2" [Mus musculus (taxid:10090)]

 Score = 385 (140.6 bits), Expect = 3.7e-34, P = 3.7e-34
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:  1213 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 1272

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:  1273 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1311

GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0042787 "protein ubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IBA

RGD|1593244 Hecw2 "HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2" [Rattus norvegicus (taxid:10116)]

 Score = 385 (140.6 bits), Expect = 3.7e-34, P = 3.7e-34
 Identities = 76/99 (76%), Positives = 83/99 (83%)

Query:     5 KG-GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
             KG G  P  L L IRRDHLLEDAFN+IM  S+KDL + KLY  F  E+GLDY GPSREFF
Sbjct:  1213 KGYGQGPGKLKLIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFF 1272

Query:    64 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
             FL+SR+LFNPYYGLFEYSANDTYTVQISPMSAFVDN+HE
Sbjct:  1273 FLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHE 1311

GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA

GO:0005634 "nucleus" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0042787 "protein ubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IBA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O14326	PUB3_SCHPO	6, ., 3, ., 2, ., -	0.5697	0.8333	0.1081	yes	N/A
A2QQ28	RSP5_ASPNC	6, ., 3, ., 2, ., -	0.5802	0.7843	0.0974	yes	N/A
Q4WTF3	RSP5_ASPFU	6, ., 3, ., 2, ., -	0.5802	0.7843	0.0984	yes	N/A
Q9P2P5	HECW2_HUMAN	6, ., 3, ., 2, ., -	0.7708	0.9411	0.0610	yes	N/A
Q2UBP1	RSP5_ASPOR	6, ., 3, ., 2, ., -	0.5731	0.7843	0.0980	yes	N/A
P39940	RSP5_YEAST	6, ., 3, ., 2, ., -	0.5465	0.8333	0.1050	yes	N/A
Q5BDP1	RSP5_EMENI	6, ., 3, ., 2, ., -	0.5802	0.7843	0.0974	yes	N/A
Q6I6G8	HECW2_MOUSE	6, ., 3, ., 2, ., -	0.7708	0.9411	0.0608	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	102
cd00078	352	cd00078, HECTc, HECT domain; C-terminal catalytic	2e-26
COG5021	872	COG5021, HUL4, Ubiquitin-protein ligase [Posttrans	3e-23
smart00119	328	smart00119, HECTc, Domain Homologous to E6-AP Carb	3e-19
pfam00632	298	pfam00632, HECT, HECT-domain (ubiquitin-transferas	0.003

>gnl|CDD|238033 cd00078, HECTc, HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3)

 Score = 99.2 bits (248), Expect = 2e-26
 Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 13 LSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFN 72
          L + +RRD +LEDA  ++   S  DL K  L  +F  E+G+D GG +REFF L+S++LFN
Sbjct: 1  LKITVRRDRILEDALRQLSKVSSSDLKK-VLEVEFVGEEGIDAGGVTREFFTLVSKELFN 59

Query: 73 PYYGLFEYSANDTYTVQISPMS 94
          P YGLF Y+ +D+  +  +P S
Sbjct: 60 PSYGLFRYTPDDSGLLYPNPSS 81

It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains. Length = 352

>gnl|CDD|227354 COG5021, HUL4, Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]

 Score = 91.8 bits (228), Expect = 3e-23
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 1   MKFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSR 60
               K       L + +RRD + ED++ +IM  S  DL K  L  +F  E+G+D GG +R
Sbjct: 503 SLKQKAKIFDPYLHIKVRRDRVFEDSYREIMDESGDDLKK-TLEIEFVGEEGIDAGGLTR 561

Query: 61  EFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMS 94
           E+ FLLS+++FNP YGLFEY   D YT+ I+P+S
Sbjct: 562 EWLFLLSKEMFNPDYGLFEYITEDLYTLPINPLS 595

Length = 872

>gnl|CDD|214523 smart00119, HECTc, Domain Homologous to E6-AP Carboxyl Terminus with

 Score = 79.6 bits (197), Expect = 3e-19
 Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 37  DLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAF 96
           DL K  L  +F+ E+GLD GG +REFFFLLS++LFNP YGLF YS ND Y +  +P S F
Sbjct: 1   DLKKRVLEIEFEGEEGLDGGGVTREFFFLLSKELFNPDYGLFRYSPND-YLLYPNPRSGF 59

Query: 97  VDNYH 101
            +  H
Sbjct: 60  ANEEH 64

E3 ubiquitin-protein ligases. Can bind to E2 enzymes. Length = 328

>gnl|CDD|216035 pfam00632, HECT, HECT-domain (ubiquitin-transferase)

 Score = 34.6 bits (80), Expect = 0.003
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 65  LLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
           LLS++LFNP YGLF Y   ++  +  +P S       E
Sbjct: 2   LLSKELFNPDYGLFFYVTPNSGLLWPNPGSPESSADEE 39

The name HECT comes from Homologous to the E6-AP Carboxyl Terminus. Length = 298

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
KOG0939|consensus	720		99.91
COG5021	872	HUL4 Ubiquitin-protein ligase [Posttranslational m	99.9
KOG0941|consensus	850		99.88
cd00078	352	HECTc HECT domain; C-terminal catalytic domain of	99.87
KOG0942|consensus	1001		99.81
KOG0940|consensus	358		99.8
KOG4427|consensus	1096		99.78
smart00119	336	HECTc Domain Homologous to E6-AP Carboxyl Terminus	99.6
KOG0170|consensus	621		97.25
KOG0943|consensus	3015		95.76
PF00632	317	HECT: HECT-domain (ubiquitin-transferase); InterPr	94.22

>KOG0939|consensus

Probab=99.91  E-value=1.9e-24  Score=174.76  Aligned_cols=93  Identities=34%  Similarity=0.575  Sum_probs=88.8

Q ss_pred             CCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcEEE
Q psy14617          9 QPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTV   88 (102)
Q Consensus         9 ~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~~~   88 (102)
                      +.+.+.+.|+|+.+++||++++...++++|+. ++.|+|.||+|+|+|||+||||.++++++|||+++||...++++.++
T Consensus       360 ~~~~~~v~v~R~~v~~~S~~~~~~~s~~e~~~-rl~I~f~gEEg~D~gG~~rEw~~ll~r~ifnp~~alf~~~~~d~tt~  438 (720)
T KOG0939|consen  360 SSEKLAVLVRRALVLEDSFRALLYKSPEELKT-RLEVTFQGEEGSDAGGVTREWLQLLSREIFNPRYALFTTVGSDQTTF  438 (720)
T ss_pred             cCCcceEEEeHHHHHHHHHHHHHhCCHHHHhc-ceEEEEecccccccchHHHHHHHHHHHHHcCCCcceEEEcCCCceEE
Confidence            46788999999999999999999999999975 99999999999999999999999999999999999999999888899


Q ss_pred             EeCCCCCCCCCCCC
Q psy14617         89 QISPMSAFVDNYHE  102 (102)
Q Consensus        89 ~~np~s~~~~~hl~  102 (102)
                      +|||+|..+|+||+
T Consensus       439 ~pn~~s~~np~hLs  452 (720)
T KOG0939|consen  439 HPNPNSYVNPEHLS  452 (720)
T ss_pred             eeCCcccCChhhhh
Confidence            99999999999985

>COG5021 HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=99.90  E-value=2.2e-24  Score=179.73  Aligned_cols=95  Identities=42%  Similarity=0.739  Sum_probs=90.1

Q ss_pred             CCCCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcE
Q psy14617          7 GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTY   86 (102)
Q Consensus         7 ~~~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~   86 (102)
                      ...++.+.|.|||+++++||+++++..++.++++ .|.|+|.||+|+|+|||+||||.++++++|+|+++||.++.++.+
T Consensus       509 ~~~~~~l~I~VrRd~vf~Dsy~~i~~~~~~~~k~-~L~i~F~~EeGiD~GGltrE~~~lLs~~~Fnp~y~LF~y~t~d~~  587 (872)
T COG5021         509 KIFDPYLHIKVRRDRVFEDSYREIMDESGDDLKK-TLEIEFVGEEGIDAGGLTREWLFLLSKEMFNPDYGLFEYITEDLY  587 (872)
T ss_pred             cccCcceEEEEecccchHHHHHHHHHhchhhhcc-eEEEEecCcccccCCccchHHHHHHhHHhcCCcccceeeeccccc
Confidence            3567789999999999999999999999999865 899999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCC
Q psy14617         87 TVQISPMSAFVDNYHE  102 (102)
Q Consensus        87 ~~~~np~s~~~~~hl~  102 (102)
                      +++|||.|.++|+||+
T Consensus       588 ~~~~n~~s~~npe~L~  603 (872)
T COG5021         588 TLPINPLSSINPEHLS  603 (872)
T ss_pred             ccCcCccccCCHHHHH
Confidence            9999999999999984

>KOG0941|consensus

Probab=99.88  E-value=5.8e-23  Score=168.73  Aligned_cols=86  Identities=40%  Similarity=0.705  Sum_probs=79.7

Q ss_pred             CCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcEEE
Q psy14617          9 QPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTV   88 (102)
Q Consensus         9 ~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~~~   88 (102)
                      .+|++.|+|||++|++||++++..++..|++| +|+|.|.||+|+|+|||+||||.++++++|+|++|||++.++.+ .+
T Consensus       498 ~~p~l~l~VrR~~lv~Dsl~~l~~~~~~Dl~K-~L~V~F~gE~g~DaGGv~kEfF~ll~~ei~~p~~GmF~~~e~s~-~~  575 (850)
T KOG0941|consen  498 VSPYLKLTVRRDHLVEDALRQLSMISMSDLKK-QLKVEFVGEEGVDAGGVRKEFFQLLVEEIFNPEYGMFTYDEESS-LL  575 (850)
T ss_pred             CCCcEEEEEehhhhHHHHHHHHHhhhhhhhhc-ceEEEECCCcccccCchHHHHHHHHHHHHcCccccCeecccccc-ee
Confidence            57899999999999999999999999999987 99999999999999999999999999999999999999988764 56


Q ss_pred             EeCCCCCC
Q psy14617         89 QISPMSAF   96 (102)
Q Consensus        89 ~~np~s~~   96 (102)
                      |+|+...-
T Consensus       576 WF~~~~~~  583 (850)
T KOG0941|consen  576 WFNPSPFE  583 (850)
T ss_pred             eecCCCCC
Confidence            88887654

>cd00078 HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3)

Probab=99.87  E-value=4e-22  Score=152.37  Aligned_cols=87  Identities=41%  Similarity=0.707  Sum_probs=79.5

Q ss_pred             EEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcEEEEeCCC
Q psy14617         14 SLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM   93 (102)
Q Consensus        14 ~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~~~~~np~   93 (102)
                      +|+|+|++|++|+++++.+.++.++++ +++|+|.||.|+|+||++||||+++++++++|+.+||..+++++..|+|||.
T Consensus         2 ~i~v~R~~i~~~~~~~l~~~~~~~l~~-~l~V~F~gE~g~D~GG~~rE~~~~l~~el~~~~~~lF~~~~~~~~~~~~~p~   80 (352)
T cd00078           2 KITVRRDRILEDALRQLSKVSSSDLKK-VLEVEFVGEEGIDAGGVTREFFTLVSKELFNPSYGLFRYTPDDSGLLYPNPS   80 (352)
T ss_pred             eEEEECCcHHHHHHHHHHhcCHHHhcC-ceEEEECCCCccCCCcchHHHHHHHHHHHcCCCCCCeeecCCCCceEEeCCC
Confidence            689999999999999999999888876 9999999999999999999999999999999999999998874457899999


Q ss_pred             CCCCCCCC
Q psy14617         94 SAFVDNYH  101 (102)
Q Consensus        94 s~~~~~hl  101 (102)
                      +...|+|+
T Consensus        81 ~~~~~~~~   88 (352)
T cd00078          81 SFADEDHL   88 (352)
T ss_pred             cccchhHH
Confidence            98766654

It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.

>KOG0942|consensus

Probab=99.81  E-value=3.7e-20  Score=153.36  Aligned_cols=81  Identities=36%  Similarity=0.589  Sum_probs=74.3

Q ss_pred             eEEEEcCCchHHHHHHHHHcCCcccccccceEEEEec-----CCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcEE
Q psy14617         13 LSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDS-----EDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYT   87 (102)
Q Consensus        13 ~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~g-----E~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~~   87 (102)
                      ..++|||++|+||||+++.+....|++. .++|+|++     |+|||+||++|||++.++++.|||++|+|+.+.+  +.
T Consensus       640 ~~~tIRRd~iyeDAfd~f~p~~e~dlk~-~iRVtfVne~G~~EaGIDGGGIfkEFLtel~ktaFdpn~GlF~~T~~--~l  716 (1001)
T KOG0942|consen  640 PSATIRRDHIYEDAFDAFSPKGEPDLKS-SIRVTFVNEHGVDEAGIDGGGIFKEFLTELLKTAFDPNYGLFKETED--HL  716 (1001)
T ss_pred             ccEEEehhhhHHHHHHhcCccCCccccc-ceEEEEecccCccccCccCcccHHHHHHHHHHhhcCccccceeeccc--ce
Confidence            6899999999999999999999999854 89999997     7899999999999999999999999999998764  46


Q ss_pred             EEeCCCCCC
Q psy14617         88 VQISPMSAF   96 (102)
Q Consensus        88 ~~~np~s~~   96 (102)
                      +||||.+++
T Consensus       717 LYPNp~~~~  725 (1001)
T KOG0942|consen  717 LYPNPTAAM  725 (1001)
T ss_pred             ecCCCCchh
Confidence            899999985

>KOG0940|consensus

Probab=99.80  E-value=2e-20  Score=144.05  Aligned_cols=94  Identities=47%  Similarity=0.810  Sum_probs=88.4

Q ss_pred             CCCCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcE
Q psy14617          7 GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTY   86 (102)
Q Consensus         7 ~~~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~   86 (102)
                      +.+++.+.++|+|+++|||+|+++++.++.++++ .+.+.|.||+|.|.||+.||||.++++++|+|.+++|.++.++ +
T Consensus        11 ~~~~~~~~~~~~~~~~~e~~f~~iM~~~~~~~~~-~l~~~~~~ee~ldy~glprewf~~lS~e~~~p~~~~~~~~~~~-~   88 (358)
T KOG0940|consen   11 PQGPQQSHHKVDRDHLLEDSFNQIMNPKPSDLQK-RLMREFKGEEGLDYGGLPREWFFLLSHEGFNPWYGLFQHSRKD-Y   88 (358)
T ss_pred             CCCCceeEEEechhhhHHHHHHHHhCCCchhhhh-cceeecccccccccCCCCcceeeeeccccCCcceeeeeecccc-c
Confidence            3467789999999999999999999999999865 9999999999999999999999999999999999999999887 8


Q ss_pred             EEEeCCCCCCCCCCCC
Q psy14617         87 TVQISPMSAFVDNYHE  102 (102)
Q Consensus        87 ~~~~np~s~~~~~hl~  102 (102)
                      ++|+||.++++|+||+
T Consensus        89 tlq~~P~sg~~p~~l~  104 (358)
T KOG0940|consen   89 TLWLNPRSGVNPGHLT  104 (358)
T ss_pred             ccccCCccCCCCCccc
Confidence            9999999999999985

>KOG4427|consensus

Probab=99.78  E-value=1.9e-19  Score=147.49  Aligned_cols=93  Identities=26%  Similarity=0.453  Sum_probs=83.4

Q ss_pred             CCCCc-eEEEEcCCchHHHHHHHHHcCCcccccccceEEEEec-----CCCCCCCCchHHHHHHHHHHhcCCCCCceEEe
Q psy14617          8 TQPRD-LSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDS-----EDGLDYGGPSREFFFLLSRQLFNPYYGLFEYS   81 (102)
Q Consensus         8 ~~~~~-~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~g-----E~GiD~GGl~RE~f~ll~~el~~p~~glF~~~   81 (102)
                      ..|.. ..|+|+|++|+||.|+|+..++...| |+-|+|+|++     |+|||.|||+|||+..+.+..|||+++||..+
T Consensus       706 a~p~~~t~IvvrR~rivEDGf~qL~~l~~~al-Ks~IrVkFVNeqGl~EAGiDqdGvfKEFLeeiiKkvFdp~lnLFstT  784 (1096)
T KOG4427|consen  706 ASPARSTEIVVRRGRIVEDGFQQLNSLGSPAL-KSVIRVKFVNEQGLDEAGIDQDGVFKEFLEEIIKKVFDPELNLFSTT  784 (1096)
T ss_pred             CCccceeEEEEEcccchhhHHHHHHhccchhh-hceEEEEEecccCCcccccCccchHHHHHHHHHHHHhcccccccccC
Confidence            33444 78999999999999999999988778 5799999998     67899999999999999999999999999998


Q ss_pred             cCCcEEEEeCCCCCCCCCCCC
Q psy14617         82 ANDTYTVQISPMSAFVDNYHE  102 (102)
Q Consensus        82 ~~~~~~~~~np~s~~~~~hl~  102 (102)
                      +.++ .+||.|.|.+.+|||+
T Consensus       785 s~d~-~LyPSPts~~~en~lq  804 (1096)
T KOG4427|consen  785 STDR-RLYPSPTSYHHENHLQ  804 (1096)
T ss_pred             CCCc-eecCCchhhhhhchhH
Confidence            8655 5789999999999985

>smart00119 HECTc Domain Homologous to E6-AP Carboxyl Terminus with

Probab=99.60  E-value=8.7e-16  Score=117.31  Aligned_cols=65  Identities=51%  Similarity=0.846  Sum_probs=56.5

Q ss_pred             cccccccc-eEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcEEEEeCCCCCC-CCCCC
Q psy14617         35 KKDLAKCK-LYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAF-VDNYH  101 (102)
Q Consensus        35 ~~~l~~~~-l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~~~~~np~s~~-~~~hl  101 (102)
                      ..+|++ + ++|+|.||.|+|+||++||||+++++++++|+.+||.++++++ .+||||.+.. .++||
T Consensus         4 ~~~~~~-~~l~V~F~gE~g~d~gG~~rEf~~~l~~el~~~~~~lf~~~~~~~-~~~~~p~~~~~~~~~l   70 (336)
T smart00119        4 DEDLKK-SVLEIEFEGEEGLDGGGVTREFFFLLSKELFNPDYGLFRYSPNDY-LLYPNPRAFFANPEHL   70 (336)
T ss_pred             hHHhCC-CeEEEEECCCCCccCCchHHHHHHHHHHHHhCcccCCceEcCCCC-eEEeCCCccccchHHH
Confidence            457766 7 9999999999999999999999999999999999999987654 6889998765 46554

E3 ubiquitin-protein ligases. Can bind to E2 enzymes.

>KOG0170|consensus

Probab=97.25  E-value=0.00015  Score=58.79  Aligned_cols=70  Identities=23%  Similarity=0.369  Sum_probs=59.2

Q ss_pred             CCCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEe
Q psy14617          8 TQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYS   81 (102)
Q Consensus         8 ~~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~   81 (102)
                      -.-++-+++|+|+.||+.|...+.....+   +.-|.|+|.+|.|- +=|++=||++++++++-.++.||..++
T Consensus       221 grL~RkK~risR~~Il~sa~kvm~~ygss---~~vLEIEY~~EvGT-GLGPTLEFYtlVSk~fq~~sLgmWR~~  290 (621)
T KOG0170|consen  221 GRLTRKKLRISRKTILASALKVMEKYGSS---KAVLEIEYEEEVGT-GLGPTLEFYTLVSKEFQRASLGMWRCN  290 (621)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHHHhcCC---cceEEEEecccccc-CCCcceeeHHHHHHHHhhccccccccC
Confidence            34456679999999999999988776554   34799999999886 449999999999999999999999874

>KOG0943|consensus

Probab=95.76  E-value=0.017  Score=51.65  Aligned_cols=77  Identities=27%  Similarity=0.431  Sum_probs=53.8

Q ss_pred             CCcccCCCCC-CceEEEEcC--CchHHHHHHHHHcC------Cc-------ccccccceEEEEecCCCCCCCCchHHHHH
Q psy14617          1 MKFLKGGTQP-RDLSLNIRR--DHLLEDAFNKIMLA------SK-------KDLAKCKLYAQFDSEDGLDYGGPSREFFF   64 (102)
Q Consensus         1 ~~~l~~~~~~-~~~~l~V~R--~~il~ds~~~l~~~------~~-------~~l~~~~l~V~F~gE~GiD~GGl~RE~f~   64 (102)
                      ||+||.-+.. ..+.+.|+|  +.++.|++.||...      +.       ..|---+++|+|++|.|- +.||.|-||+
T Consensus      2430 ~EK~RnQhSnvkdi~LdV~Rdp~~LfqdTM~QLhh~fakR~~strslesghaPlAg~RlkVhFiDEPGE-GsGVaRSFYT 2508 (3015)
T KOG0943|consen 2430 MEKLRNQHSNVKDISLDVDRDPDLLFQDTMRQLHHHFAKRCASTRSLESGHAPLAGHRLKVHFIDEPGE-GSGVARSFYT 2508 (3015)
T ss_pred             HHHHHhccccccceeeeeccCcchHHHHHHHHHHHHHHHHhhhhhccccCCCcccceeEEEEEecCCCC-CcchHHHHHH
Confidence            4556654442 357888877  67899999998653      11       123223799999999995 7899999999


Q ss_pred             HHHHHhcCCCCCceE
Q psy14617         65 LLSRQLFNPYYGLFE   79 (102)
Q Consensus        65 ll~~el~~p~~glF~   79 (102)
                      -+.++.+... .+|.
T Consensus      2509 AfAeaclmd~-a~fn 2522 (3015)
T KOG0943|consen 2509 AFAEACLMDE-ALFN 2522 (3015)
T ss_pred             HHHHHHhhcc-CCCC
Confidence            9988766432 3443

>PF00632 HECT: HECT-domain (ubiquitin-transferase); InterPro: IPR000569 The name HECT comes from 'Homologous to the E6-AP Carboxyl Terminus' []

Probab=94.22  E-value=0.035  Score=41.65  Aligned_cols=29  Identities=34%  Similarity=0.578  Sum_probs=24.5

Q ss_pred             HHHHHHhcCCCCCceEEecCCcEEEEeCCC
Q psy14617         64 FLLSRQLFNPYYGLFEYSANDTYTVQISPM   93 (102)
Q Consensus        64 ~ll~~el~~p~~glF~~~~~~~~~~~~np~   93 (102)
                      +++++|+|+|+.+||..+++++ .+++||.
T Consensus         1 ~l~~~el~~~~~~lF~~~~~~~-~~~~~~~   29 (317)
T PF00632_consen    1 TLLCKELFDPNLGLFYQTSNNG-LFWPNPN   29 (317)
T ss_dssp             HHHHHHHTSGGGSSEESSTTTC-EEEEECC
T ss_pred             CHHHHHhcCccCCCceEcCCCC-EEeCCCc
Confidence            5899999999999998777655 6789986

Proteins containing this domain at the C terminus include ubiquitin-protein ligase, which regulates ubiquitination of CDC25. Ubiquitin-protein ligase accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester, and then directly transfers the ubiquitin to targeted substrates. A cysteine residue is required for ubiquitin-thiolester formation. Human thyroid receptor interacting protein 12, which also contains this domain, is a component of an ATP-dependent multisubunit protein that interacts with the ligand binding domain of the thyroid hormone receptor. It could be an E3 ubiquitin-protein ligase. Human ubiquitin-protein ligase E3A interacts with the E6 protein of the cancer-associated Human papillomavirus type 16 and Human papillomavirus type 18. The E6/E6-AP complex binds to and targets the P53 tumour-suppressor protein for ubiquitin-mediated proteolysis.; GO: 0016881 acid-amino acid ligase activity, 0006464 protein modification process, 0005622 intracellular; PDB: 3TUG_A 1ZVD_A 1C4Z_C 1D5F_B 1ND7_A 2XBB_A 2XBF_A 3PT3_A 3G1N_B 3H1D_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	102
2xbb_A	386	Nedd4 Hect:ub Complex Length = 386		7e-25
3jvz_C	385	E2~ubiquitin-Hect Length = 385		3e-24
3jw0_C	385	E2~ubiquitin-Hect Length = 385		3e-24
2oni_A	392	Catalytic Domain Of The Human Nedd4-Like E3 Ligase		1e-22
3olm_A	429	Structure And Function Of A Ubiquitin Binding Site		3e-22
3tug_A	398	Crystal Structure Of The Hect Domain Of Itch E3 Ubi		4e-18
1nd7_A	374	Conformational Flexibility Underlies Ubiquitin Liga		5e-18
1zvd_A	380	Regulation Of Smurf2 Ubiquitin Ligase Activity By A		5e-17
3h1d_A	405	Structure Of The Huwe1 Hect Domain Length = 405		4e-15
3g1n_A	388	Catalytic Domain Of The Human E3 Ubiquitin-Protein		4e-15
1c4z_A	358	Structure Of E6ap: Insights Into Ubiquitination Pat		3e-11

>pdb|2XBB|A Chain A, Nedd4 Hect:ub Complex Length = 386

Iteration: 1
 Score =  108 bits (270), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 67/100 (67%)
Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
           K  K    P    + +RR  +LED++ +IM   + D  K +L+ +FD E GLDYGG +RE
Sbjct: 18  KLKKQNDIPNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVARE 77
Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           +FFL+S+++FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 78  WFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 117

>pdb|3JVZ|C Chain C, E2~ubiquitin-Hect Length = 385

Iteration: 1
 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 69/100 (69%)
Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
           K  K    P    + + R+++ E+++ +IM   + D+ K +L+ +F+SE GLDYGG +RE
Sbjct: 17  KLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVARE 76
Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           +FFLLS+++FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 77  WFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 116

>pdb|3JW0|C Chain C, E2~ubiquitin-Hect Length = 385

Iteration: 1
 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 69/100 (69%)
Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
           K  K    P    + + R+++ E+++ +IM   + D+ K +L+ +F+SE GLDYGG +RE
Sbjct: 17  KLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVARE 76
Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           +FFLLS+++FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 77  WFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 116

>pdb|2ONI|A Chain A, Catalytic Domain Of The Human Nedd4-Like E3 Ligase Length = 392

Iteration: 1
 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 66/100 (66%)
Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
           K  K    P      + R+++ E+++ +I    + D+ K +L+ +F+SE GLDYGG +RE
Sbjct: 32  KLKKPADIPNRFEXKLHRNNIFEESYRRIXSVKRPDVLKARLWIEFESEKGLDYGGVARE 91
Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           +FFLLS++ FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 92  WFFLLSKEXFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 131

>pdb|3OLM|A Chain A, Structure And Function Of A Ubiquitin Binding Site Within The Catalytic Domain Of A Hect Ubiquitin Ligase Length = 429

Iteration: 1
 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 10  PRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQ 69
           P    + +RR ++ EDA+ +IM  + +DL K +L  +FD E+GLDYGG SREFFFLLS +
Sbjct: 72  PGQCHIKVRRKNIFEDAYQEIMRQTPEDLKK-RLMIKFDGEEGLDYGGVSREFFFLLSHE 130
Query: 70  LFNPYYGLFEYSANDTYTVQISPMSAF 96
           +FNP+Y LFEYSA D YT+QI+P S  
Sbjct: 131 MFNPFYCLFEYSAYDNYTIQINPNSGI 157

>pdb|3TUG|A Chain A, Crystal Structure Of The Hect Domain Of Itch E3 Ubiquitin Ligase Length = 398

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 10  PRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQ 69
           P+ + + + R  L ED+F +IM  S +DL + +L+  F  E+GLDYGG +RE+FFLLS +
Sbjct: 40  PQHIKITVTRKTLFEDSFQQIMSFSPQDLRR-RLWVIFPGEEGLDYGGVAREWFFLLSHE 98
Query: 70  LFNPYYGLFEYSANDTYTVQISPMS 94
           + NP Y LFEY+  D Y +QI+P S
Sbjct: 99  VSNPMYCLFEYAGKDNYCLQINPAS 123

>pdb|1ND7|A Chain A, Conformational Flexibility Underlies Ubiquitin Ligation Mediated By The Wwp1 Hect Domain E3 Ligase Length = 374

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 10  PRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQ 69
           P  + +N+ R  L ED+F +IM     DL + +LY  F  E+GLDYGG +RE+FFLLS +
Sbjct: 21  PSHVKINVSRQTLFEDSFQQIMALKPYDLRR-RLYVIFRGEEGLDYGGLAREWFFLLSHE 79
Query: 70  LFNPYYGLFEYSANDTYTVQISPMSA 95
           + NP Y LFEY+  + Y +QI+P S 
Sbjct: 80  VLNPMYCLFEYAGKNNYCLQINPAST 105

>pdb|1ZVD|A Chain A, Regulation Of Smurf2 Ubiquitin Ligase Activity By Anchoring The E2 To The Hect Domain Length = 380

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/81 (45%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 15  LNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPY 74
           + + R+ + E+++ ++     KDL K +L  +F  E+GLDYGG +RE+ +LLS +  NPY
Sbjct: 27  IEVSREEIFEESYRQVXKXRPKDLWK-RLXIKFRGEEGLDYGGVAREWLYLLSHEXLNPY 85
Query: 75  YGLFEYSANDTYTVQISPMSA 95
           YGLF+YS +D YT+QI+P SA
Sbjct: 86  YGLFQYSRDDIYTLQINPDSA 106

>pdb|3H1D|A Chain A, Structure Of The Huwe1 Hect Domain Length = 405

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 4   LKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
           L  G +  D+++++RRDH+ ED++ ++   S +++ K +LY  F+ E+G D GG  RE++
Sbjct: 39  LDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEM-KNRLYIVFEGEEGQDAGGLLREWY 97
Query: 64  FLLSRQLFNPYYGLFEYSANDTYTVQISPMS 94
            ++SR++FNP Y LF  S  D  T  I+P S
Sbjct: 98  MIISREMFNPMYALFRTSPGDRVTYTINPSS 128

>pdb|3G1N|A Chain A, Catalytic Domain Of The Human E3 Ubiquitin-Protein Ligase Huwe1 Length = 388

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 4   LKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
           L  G +  D+++++RRDH+ ED++ ++   S +++ K +LY  F+ E+G D GG  RE++
Sbjct: 22  LDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEM-KNRLYIVFEGEEGQDAGGLLREWY 80
Query: 64  FLLSRQLFNPYYGLFEYSANDTYTVQISPMS 94
            ++SR++FNP Y LF  S  D  T  I+P S
Sbjct: 81  MIISREMFNPMYALFRTSPGDRVTYTINPSS 111

>pdb|1C4Z|A Chain A, Structure Of E6ap: Insights Into Ubiquitination Pathway Length = 358

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 13 LSLNIRRDHLLEDAFNKIMLASKKDLA--KCKLYAQFDSEDGLDYGGPSREFFFLLSRQL 70
          L L +RRDH+++DA  ++ + + ++ A  K +LY +F+ E G+D GG S+EFF L+  ++
Sbjct: 6  LRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEI 65
Query: 71 FNPYYGLFEY 80
          FNP  G+F Y
Sbjct: 66 FNPDIGMFTY 75

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	102
2oni_A	392	E3 ubiquitin-protein ligase NEDD4-like protein; al	4e-38
1zvd_A	380	SMAD ubiquitination regulatory factor 2; ubiquitin	1e-37
3h1d_A	405	E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT,	1e-36
3olm_A	429	E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {S	2e-35
1nd7_A	374	WW domain-containing protein 1; HECT, ubiquitin, l	2e-35
1c4z_A	358	E6AP, ubiquitin-protein ligase E3A; bilobal struct	3e-32

>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A Length = 392

 Score =  130 bits (329), Expect = 4e-38
 Identities = 45/97 (46%), Positives = 68/97 (70%)

Query: 5   KGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFF 64
           K    P    + + R+++ E+++ +IM   + D+ K +L+ +F+SE GLDYGG +RE+FF
Sbjct: 35  KPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVAREWFF 94

Query: 65  LLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           LLS+++FNPYYGLFEYSA D YT+QI+P S   +  H
Sbjct: 95  LLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDH 131

>1zvd_A SMAD ubiquitination regulatory factor 2; ubiquitin ligasecatalytic mechanism,X-RAY ligase; 2.10A {Homo sapiens} Length = 380

 Score =  128 bits (325), Expect = 1e-37
 Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 1/101 (0%)

Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
           +  +   Q     + + R+ + E+++ ++M    KDL   +L  +F  E+GLDYGG +RE
Sbjct: 14  ELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDL-WKRLMIKFRGEEGLDYGGVARE 72

Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
           + +LLS ++ NPYYGLF+YS +D YT+QI+P SA    +  
Sbjct: 73  WLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLS 113

>3h1d_A E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT, LOBE, alternative splicing, chromosomal rearrangement, cytoplasm, differentiation; 1.89A {Homo sapiens} PDB: 3g1n_A Length = 405

 Score =  126 bits (320), Expect = 1e-36
 Identities = 36/102 (35%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 1   MKFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSR 60
           ++ L  G +  D+++++RRDH+ ED++ ++   S +++ K +LY  F+ E+G D GG  R
Sbjct: 36  LERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEM-KNRLYIVFEGEEGQDAGGLLR 94

Query: 61  EFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
           E++ ++SR++FNP Y LF  S  D  T  I+P S    N+  
Sbjct: 95  EWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHANPNHLS 136

>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae} Length = 429

 Score =  123 bits (311), Expect = 2e-35
 Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 1/102 (0%)

Query: 1   MKFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSR 60
                    P    + +RR ++ EDA+ +IM  + +DL K +L  +FD E+GLDYGG SR
Sbjct: 63  RSQPALRILPGQCHIKVRRKNIFEDAYQEIMRQTPEDL-KKRLMIKFDGEEGLDYGGVSR 121

Query: 61  EFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
           EFFFLLS ++FNP+Y LFEYSA D YT+QI+P S     +  
Sbjct: 122 EFFFLLSHEMFNPFYCLFEYSAYDNYTIQINPNSGINPEHLN 163

>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A Length = 374

 Score =  122 bits (309), Expect = 2e-35
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 1/101 (0%)

Query: 2   KFLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSRE 61
              +    P  + +N+ R  L ED+F +IM     DL + +LY  F  E+GLDYGG +RE
Sbjct: 13  YLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDL-RRRLYVIFRGEEGLDYGGLARE 71

Query: 62  FFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
           +FFLLS ++ NP Y LFEY+  + Y +QI+P S    ++  
Sbjct: 72  WFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLS 112

>1c4z_A E6AP, ubiquitin-protein ligase E3A; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.148.1.1 PDB: 1d5f_A Length = 358

 Score =  114 bits (287), Expect = 3e-32
 Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 13  LSLNIRRDHLLEDAFNKIMLASKKDLA--KCKLYAQFDSEDGLDYGGPSREFFFLLSRQL 70
           L L +RRDH+++DA  ++ + + ++ A  K +LY +F+ E G+D GG S+EFF L+  ++
Sbjct: 6   LRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEI 65

Query: 71  FNPYYGLFEYSANDTYTVQISPMSAFVDNY 100
           FNP  G+F Y    T     +P S   +  
Sbjct: 66  FNPDIGMFTYDE-STKLFWFNPSSFETEGQ 94

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
3h1d_A	405	E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT,	99.95
3olm_A	429	E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {S	99.94
1nd7_A	374	WW domain-containing protein 1; HECT, ubiquitin, l	99.93
1zvd_A	380	SMAD ubiquitination regulatory factor 2; ubiquitin	99.93
2oni_A	392	E3 ubiquitin-protein ligase NEDD4-like protein; al	99.91
1c4z_A	358	E6AP, ubiquitin-protein ligase E3A; bilobal struct	99.9

>3h1d_A E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT, LOBE, alternative splicing, chromosomal rearrangement, cytoplasm, differentiation; 1.89A {Homo sapiens} PDB: 3g1n_A

Probab=99.95  E-value=8.3e-29  Score=191.95  Aligned_cols=98  Identities=36%  Similarity=0.682  Sum_probs=87.3

Q ss_pred             cccCCCCCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEec
Q psy14617          3 FLKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSA   82 (102)
Q Consensus         3 ~l~~~~~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~   82 (102)
                      +++.++.++.+.|+|||++|++||+++++..++.+|++ +|+|+|.||+|+|+||++||||+++++++|+|++|||++++
T Consensus        38 ~~~~~~~~~~~~l~VrR~~i~eds~~~l~~~~~~~lk~-~l~V~F~gE~G~D~GG~~rEff~ll~~elf~p~~gLF~~~~  116 (405)
T 3h1d_A           38 RLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKN-RLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSP  116 (405)
T ss_dssp             HHTTTCCCCEEEEEECGGGHHHHHHHHHTTSCTTGGGS-EEEEEETTCCSCCCTTHHHHHHHHHHHHTTCGGGTSEEECS
T ss_pred             hhhcCCCCCceEEEEeCchHHHHHHHHHHccCHHHhhc-ceEEEECCCCCcCCChhHHHHHHHHHHHHhCCcccceeecc
Confidence            45677788899999999999999999999999999975 99999999999999999999999999999999999999998


Q ss_pred             CCcEEEEeCCCCCCCCCCC
Q psy14617         83 NDTYTVQISPMSAFVDNYH  101 (102)
Q Consensus        83 ~~~~~~~~np~s~~~~~hl  101 (102)
                      +++++|+|||.|..+|+||
T Consensus       117 ~~~~~~~~np~s~~~~~~l  135 (405)
T 3h1d_A          117 GDRVTYTINPSSHANPNHL  135 (405)
T ss_dssp             SCSSEEEECCC-----CHH
T ss_pred             CCceeEeeCCccccChhHH
Confidence            8888999999998889886

>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.8e-27  Score=185.52  Aligned_cols=94  Identities=50%  Similarity=0.898  Sum_probs=80.3

Q ss_pred             CCCCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcE
Q psy14617          7 GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTY   86 (102)
Q Consensus         7 ~~~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~   86 (102)
                      ...++++.|+|||++|++||++++++.++.+|++ +|+|+|.||+|+|+|||+||||+++++++|+|++|||++++++++
T Consensus        69 ~~~~~~~~l~VrR~~i~eds~~~l~~~~~~~lk~-~l~V~F~gE~G~D~GG~~rEff~ll~~elf~p~~gLF~~~~~~~~  147 (429)
T 3olm_A           69 RILPGQCHIKVRRKNIFEDAYQEIMRQTPEDLKK-RLMIKFDGEEGLDYGGVSREFFFLLSHEMFNPFYCLFEYSAYDNY  147 (429)
T ss_dssp             SCCSSCEEEEEETTSHHHHHHHHHHHSCHHHHTS-CEEEEEETTC--------CHHHHHHHHHHTCGGGSSEEESSSSSC
T ss_pred             cCCCCceEEEEecchhHHHHHHHHHhcChHhcCc-ceEEEECCCCccCCChhHHHHHHHHHHHHcCccCCCceeeCCCCe
Confidence            3456789999999999999999999999999976 999999999999999999999999999999999999999988888


Q ss_pred             EEEeCCCCCCCCCCC
Q psy14617         87 TVQISPMSAFVDNYH  101 (102)
Q Consensus        87 ~~~~np~s~~~~~hl  101 (102)
                      +++|||.|.+.|+||
T Consensus       148 ~~~~np~s~~~~~~l  162 (429)
T 3olm_A          148 TIQINPNSGINPEHL  162 (429)
T ss_dssp             CEEECGGGGGSTTHH
T ss_pred             eEeeCCcccCCHHHH
Confidence            999999999989886

>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A

Probab=99.93  E-value=4.9e-27  Score=180.25  Aligned_cols=94  Identities=43%  Similarity=0.826  Sum_probs=88.0

Q ss_pred             CCCCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcE
Q psy14617          7 GTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTY   86 (102)
Q Consensus         7 ~~~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~   86 (102)
                      ...++++.|+|+|++|++||+++++..++.+|++ +++|+|.||+|+|+||++||||+++++++|+|++|||++++++++
T Consensus        18 ~~~~~~~~l~V~R~~i~~ds~~~l~~~~~~~l~~-~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~~lF~~~~~~~~   96 (374)
T 1nd7_A           18 NALPSHVKINVSRQTLFEDSFQQIMALKPYDLRR-RLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNY   96 (374)
T ss_dssp             TCCSSEEEEEECTTTHHHHHHHHHHTSCGGGGGS-EEEEEETTTCCCCCTHHHHHHHHHHHHHHTCGGGSSEEESSSSSC
T ss_pred             cCCCCCeEEEECCCCHHHHHHHHHHhcCHHhccc-eEEEEECCCCCcCCCccHHHHHHHHHHHHcCCccccccccCCCCc
Confidence            3457899999999999999999999999999975 999999999999999999999999999999999999999888888


Q ss_pred             EEEeCCCCCCCCCCC
Q psy14617         87 TVQISPMSAFVDNYH  101 (102)
Q Consensus        87 ~~~~np~s~~~~~hl  101 (102)
                      +++|||.|...|+||
T Consensus        97 ~~~~~p~s~~~~~~l  111 (374)
T 1nd7_A           97 CLQINPASTINPDHL  111 (374)
T ss_dssp             CEEECGGGGGSTTHH
T ss_pred             eeccCCcccCCHHHH
Confidence            999999999888886

>1zvd_A SMAD ubiquitination regulatory factor 2; ubiquitin ligasecatalytic mechanism,X-RAY ligase; 2.10A {Homo sapiens}

Probab=99.93  E-value=9.6e-27  Score=179.01  Aligned_cols=93  Identities=42%  Similarity=0.813  Sum_probs=87.5

Q ss_pred             CCCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcEE
Q psy14617          8 TQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYT   87 (102)
Q Consensus         8 ~~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~~   87 (102)
                      ..++++.|+|+|++|++||+++++..++.+|++ +++|+|.||+|+|+||++||||+++++++++|++|||.++++++++
T Consensus        20 ~~~~~~~l~V~R~~i~~ds~~~l~~~~~~~lk~-~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~gLF~~~~~~~~~   98 (380)
T 1zvd_A           20 PQAGHCRIEVSREEIFEESYRQVMKMRPKDLWK-RLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYT   98 (380)
T ss_dssp             CSSCEEEEEECSTTHHHHHHHHHHTSCGGGGGS-EEEEEETTCCCSCHHHHHHHHHHHHHHHHTSGGGSSEEEETTEEEE
T ss_pred             CCCCceEEEEccCCHHHHHHHHHHccCHHHhcC-ceEEEECCCcCcCCCccHHHHHHHHHHHHcCCcCCCeeccCCCCee
Confidence            356789999999999999999999999999975 9999999999999999999999999999999999999999888899


Q ss_pred             EEeCCCCCCCCCCC
Q psy14617         88 VQISPMSAFVDNYH  101 (102)
Q Consensus        88 ~~~np~s~~~~~hl  101 (102)
                      ++|||.|..+|+|+
T Consensus        99 ~~~np~s~~~~~~l  112 (380)
T 1zvd_A           99 LQINPDSAVNPEHL  112 (380)
T ss_dssp             EEECTTGGGSTTHH
T ss_pred             eccCchhhcChHHH
Confidence            99999999888886

>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A

Probab=99.91  E-value=1.1e-25  Score=173.63  Aligned_cols=93  Identities=46%  Similarity=0.964  Sum_probs=82.2

Q ss_pred             CCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcEEE
Q psy14617          9 QPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTV   88 (102)
Q Consensus         9 ~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~~~   88 (102)
                      .++++.|+|+|++|++||++++...+..++.+++++|+|.||+|+|+|||+||||+++++|+|+|++|||.+++++++++
T Consensus        39 ~~~~~~l~V~R~~i~eds~~~l~~~~~~~~lk~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~gLF~~~~~~~~~~  118 (392)
T 2oni_A           39 IPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTL  118 (392)
T ss_dssp             SCSEEEEEECGGGHHHHHHHHHHHCSCGGGGGSEEEEEEC-CCSSCHHHHHHHHHHHHHHHHTCGGGSSEEESSTTCCCE
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHccCcHHhhCccEEEEECCCccccCCccHHHHHHHHHHHHcCcccCCceecCCCCcee
Confidence            56789999999999999999999886544334599999999999999999999999999999999999999988888899


Q ss_pred             EeCCCCCC-CCCCC
Q psy14617         89 QISPMSAF-VDNYH  101 (102)
Q Consensus        89 ~~np~s~~-~~~hl  101 (102)
                      +|||.|.. .++||
T Consensus       119 ~~np~s~~~~~~~l  132 (392)
T 2oni_A          119 QINPNSGLCNEDHL  132 (392)
T ss_dssp             EECTTHHHHCTTHH
T ss_pred             ccCCccccccHHHH
Confidence            99999874 57765

>1c4z_A E6AP, ubiquitin-protein ligase E3A; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.148.1.1 PDB: 1d5f_A

Probab=99.90  E-value=8.4e-24  Score=161.56  Aligned_cols=85  Identities=38%  Similarity=0.713  Sum_probs=76.4

Q ss_pred             CCceEEEEcCCchHHHHHHHHH---cCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcE
Q psy14617         10 PRDLSLNIRRDHLLEDAFNKIM---LASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTY   86 (102)
Q Consensus        10 ~~~~~l~V~R~~il~ds~~~l~---~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~   86 (102)
                      .+.+.++|+|++|++||++++.   ..++.+|++ +++|+|.||+|+|+||++||||+++++++|+|++|||.++++++ 
T Consensus         3 ~~~~~l~V~R~~i~eds~~~l~~~~~~~~~~lk~-~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~glF~~~~~~~-   80 (358)
T 1c4z_A            3 NPYLRLKVRRDHIIDDALVRLEMIAMENPADLKK-QLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTK-   80 (358)
T ss_dssp             CCSCCEEECSSSHHHHHHHHHHHHHHSCGGGGGS-CCCEEETTCCCCCSSHHHHHHHHHHHHHHTSGGGCSEEEETTTT-
T ss_pred             CCeEEEEEcCCcHHHHHHHHHHHHhccCHHHhcC-ceEEEECCCcCcCCCccHHHHHHHHHHHHcCCcCCceeecCCCC-
Confidence            5689999999999999999985   456788975 99999999999999999999999999999999999999987655 


Q ss_pred             EEEeCCCCCC
Q psy14617         87 TVQISPMSAF   96 (102)
Q Consensus        87 ~~~~np~s~~   96 (102)
                      .|||||.+..
T Consensus        81 ~~~~np~s~~   90 (358)
T 1c4z_A           81 LFWFNPSSFE   90 (358)
T ss_dssp             EEEECTTCCS
T ss_pred             eEeeCCcccc
Confidence            6899999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	102
d1nd7a_	374	d.148.1.1 (A:) WW domain-containing protein 1, WWP	1e-26
d1c4za_	350	d.148.1.1 (A:) Ubiquitin-protein ligase E3a (E6ap)	1e-21

>d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 374

class: Alpha and beta proteins (a+b)
fold: Hect, E3 ligase catalytic domain
superfamily: Hect, E3 ligase catalytic domain
family: Hect, E3 ligase catalytic domain
domain: WW domain-containing protein 1, WWP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.7 bits (245), Expect = 1e-26
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 1/99 (1%)

Query: 4   LKGGTQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFF 63
            +    P  + +N+ R  L ED+F +IM     DL + +LY  F  E+GLDYGG +RE+F
Sbjct: 15  CQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDL-RRRLYVIFRGEEGLDYGGLAREWF 73

Query: 64  FLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE 102
           FLLS ++ NP Y LFEY+  + Y +QI+P S    ++  
Sbjct: 74  FLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLS 112

>d1c4za_ d.148.1.1 (A:) Ubiquitin-protein ligase E3a (E6ap) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Hect, E3 ligase catalytic domain
superfamily: Hect, E3 ligase catalytic domain
family: Hect, E3 ligase catalytic domain
domain: Ubiquitin-protein ligase E3a (E6ap)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 1e-21
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 13  LSLNIRRDHLLEDAFNKIMLASKKDLA--KCKLYAQFDSEDGLDYGGPSREFFFLLSRQL 70
           L L +RRDH+++DA  ++ + + ++ A  K +LY +F+ E G+D GG S+EFF L+  ++
Sbjct: 4   LRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEI 63

Query: 71  FNPYYGLFEYSANDTYTVQISPMSAFVDNYH 101
           FNP  G+F Y  +                + 
Sbjct: 64  FNPDIGMFTYDESTKLFWFNPSSFETEGQFT 94

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	102
d1nd7a_	374	WW domain-containing protein 1, WWP1 {Human (Homo	99.92
d1c4za_	350	Ubiquitin-protein ligase E3a (E6ap) {Human (Homo s	99.84

>d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Hect, E3 ligase catalytic domain
superfamily: Hect, E3 ligase catalytic domain
family: Hect, E3 ligase catalytic domain
domain: WW domain-containing protein 1, WWP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.2e-26  Score=170.70  Aligned_cols=93  Identities=43%  Similarity=0.834  Sum_probs=87.1

Q ss_pred             CCCCceEEEEcCCchHHHHHHHHHcCCcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcEE
Q psy14617          8 TQPRDLSLNIRRDHLLEDAFNKIMLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYT   87 (102)
Q Consensus         8 ~~~~~~~l~V~R~~il~ds~~~l~~~~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~~   87 (102)
                      ..+++++|+|+|++|++||++++...++.+|++ +++|+|.||+|+|+||++||||+++++++++|+.|||..+++++++
T Consensus        19 ~~~~~~~i~V~R~~l~~d~~~~l~~~~~~~l~~-~l~V~F~gE~g~D~GG~~rEff~~l~~el~~p~~~lf~~~~~~~~~   97 (374)
T d1nd7a_          19 ALPSHVKINVSRQTLFEDSFQQIMALKPYDLRR-RLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYC   97 (374)
T ss_dssp             CCSSEEEEEECTTTHHHHHHHHHHTSCGGGGGS-EEEEEETTTCCCCCTHHHHHHHHHHHHHHTCGGGSSEEESSSSSCC
T ss_pred             CCCCceEEEEccccHHHHHHHHHHhcCHHHhCC-CeEEEECCCCccCCCccHHHHHHHHHHHHcCCccCCeeecCCCCcc
Confidence            345689999999999999999999999999976 9999999999999999999999999999999999999999888889


Q ss_pred             EEeCCCCCCCCCCC
Q psy14617         88 VQISPMSAFVDNYH  101 (102)
Q Consensus        88 ~~~np~s~~~~~hl  101 (102)
                      +++||.+...|+|+
T Consensus        98 ~~~~p~~~~~~~~~  111 (374)
T d1nd7a_          98 LQINPASTINPDHL  111 (374)
T ss_dssp             EEECGGGGGSTTHH
T ss_pred             cccCCccccChhHH
Confidence            99999999888875

>d1c4za_ d.148.1.1 (A:) Ubiquitin-protein ligase E3a (E6ap) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Hect, E3 ligase catalytic domain
superfamily: Hect, E3 ligase catalytic domain
family: Hect, E3 ligase catalytic domain
domain: Ubiquitin-protein ligase E3a (E6ap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.2e-21  Score=146.20  Aligned_cols=85  Identities=38%  Similarity=0.710  Sum_probs=74.1

Q ss_pred             CCceEEEEcCCchHHHHHHHHHcC---CcccccccceEEEEecCCCCCCCCchHHHHHHHHHHhcCCCCCceEEecCCcE
Q psy14617         10 PRDLSLNIRRDHLLEDAFNKIMLA---SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTY   86 (102)
Q Consensus        10 ~~~~~l~V~R~~il~ds~~~l~~~---~~~~l~~~~l~V~F~gE~GiD~GGl~RE~f~ll~~el~~p~~glF~~~~~~~~   86 (102)
                      .|+++|+|+|++|++||++++...   +..+|++ +++|+|.||+|+|+||++||||+++++++++|+.|||..++++. 
T Consensus         1 ~p~l~i~v~R~~i~~d~~~~~~~~~~~~~~~l~~-~~~V~F~gE~g~D~GG~~rE~~~~l~~el~~p~~~lf~~~~~~~-   78 (350)
T d1c4za_           1 NPYLRLKVRRDHIIDDALVRLEMIAMENPADLKK-QLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTK-   78 (350)
T ss_dssp             CCSCCEEECSSSHHHHHHHHHHHHHHSCGGGGGS-CCCEEETTCCCCCSSHHHHHHHHHHHHHHTSGGGCSEEEETTTT-
T ss_pred             CCcEEEEEccCcHHHHHHHHHHHhhhcChHhcCc-cEEEEecCCcccCCCcCHHHHHHHHHHHHcCCccCCccccCCCc-
Confidence            368899999999999999988654   4567765 99999999999999999999999999999999999999988765 


Q ss_pred             EEEeCCCCCC
Q psy14617         87 TVQISPMSAF   96 (102)
Q Consensus        87 ~~~~np~s~~   96 (102)
                      .++++|.+..
T Consensus        79 ~~~~~~~~~~   88 (350)
T d1c4za_          79 LFWFNPSSFE   88 (350)
T ss_dssp             EEEECTTCCS
T ss_pred             cccCCccchh
Confidence            5678887653