Psyllid ID: psy14622

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------79
GRNVILEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVLPL
cHHHHHHHHHcccccccccccEEEEEcccccccccccccEEEccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHEEEEcccccHHHHHHHHHHHHHcccEEEEcccEEEEEccccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHccEEEcccccccccccccccccEEEcccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccEEcccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccEEEEEcccccccccccccccccccccEEEccccEEEEEccccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHcccEEEEEEEEcccccccHHHHHHHHHHHHccEEEEEcccccccccccccccccccEEEEEcccEEEEcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccEEEEEEcccccccHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcHHHHHHHHccccccHHHHHHHcccccccccccccHHHHHHHccccc
ccEEEEcccccccEEEcccccEEEEcccccccEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcEccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccEEEEEccEEEcEEcEEccHHHcHHHHHHHHHHHccEEEEEcEEcHHHHHHHHHHHHHccccEEEEccEEEEEEEccccccHHHHHHHHHcHHHHcccEEEccccccEEEEEcccccEEEEEccEEEEEccEEccHHHHHHHHHHHHHHcccEEEEEcEEcHHHHHHHHHHHcccEEEEcccccccEEEEEcHHHHHHHHHcccccEEEEcccccccEEEEEccEEEcccEccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccEEEEEccEEEcccEcccccccEccccEEEEEccEEEcEEcEEccHHHcHHHHHHHHHHHccEEEEEcEEcHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccccEEHHccccccccccccccEEEEEEEEccccEEEEEEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccEccccccHcHHHHHHccc
grnvileqswgspkitkddgrnvileqswgspkitkdgvTVAKGIELKDKFQNIGAKLVQDVAnntneeagdgtTTATVLARAIAKEGFEkiskganpieiRRGVMLAVETIKTHLKelskpvttpeeIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVLLSESKISSIQSIIPALelanskrkplviLAEDVDGEALSTLVMYRlprvlrsqnlTPLLRRAYAKdvrfgpevrglMLQGVDILADAMYrlprvlrsqnltplLRAKVEFQDALVLLSESKISSIQSIIPALelanskrkplvilaedvdgealSTLVVGkegvitvkdgktlTDELEVIEAYIYLCLKVGkegvitvkdgktlTDELEVIegmkfdrgyispYFIIELKLVLEYYIQTYIYLCLKVGkegvitvkdgktlTDELEVIegmkfdrgyispyfintakgaKVEFQDALVLLSESKISSIQSIIPALelanskrkplvilaedvdgeaLSTLVVNRLKIGLQVAavkapgfgdnrkATLQDLAVATggivfgdeaspvkledlqatdlgsvgeivitkddtlilkgkgkkedIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKvggssevevnekkDRVTDALNATRAAVeegivpgggTALLRCIAVLDKLETAnadqatgkkediDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLEssgemgydaMNNEYVNMIQKVLPL
grnvileqswgspkitkddgrnvileqswgspkitkdGVTVAKGIELKDKFQNIGAKLVQDVANNtneeagdgtttaTVLARAIAKEgfekiskganpieirrGVMLAVETIKTHlkelskpvttpeEIAQvatisangdkAVGELISDAMKRVSAKVEFQDALVLLSESKISSIQSIIPAlelanskrKPLVILAEDVDGEALSTLVMyrlprvlrsqnltpllRRAYAkdvrfgpevrGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPAlelanskrKPLVILAEdvdgealstlvvgkegvitvkdgktltdeLEVIEAYIYLCLKVgkegvitvkdgktltdeleviegmkfdrgyisPYFIIELKLVLEYYIQTYIYLCLKVGKEGvitvkdgktltdeLEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPalelanskrKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDlqatdlgsvgeivitkddtlilkgkgkkedidrradqirdqieattsdyeREKLQERLARLASGVAVlkvggssevevnekkdrvTDALNATRAaveegivpgggTALLRCIAVLDKLEtanadqatgkkedidrraDQIRDQieattsdyeREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTiatnagvdasVVVNKVLESSGemgydamnNEYVNMIQKVLPL
GRNVILEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVLLseskissiqsiiPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLseskissiqsiiPALELANSKRKPLVILAEDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLseskissiqsiiPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEdidrradqirdqiEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEdidrradqirdqiEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVLPL
*********************NVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVAN*********TTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILK*************************************LASGVAVLKV*****************ALNATRAAVEEGIVPGGGTALLRCIAVLDKLE****************************************LARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMI******
**NVILEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKE********EEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEG****************IEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVLP*
GRNVILEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVLPL
GRNVILEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVLPL
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GRNVILEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKxxxxxxxxxxxxxxxxxxxxxxxxxxxxERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVLPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query788 2.2.26 [Sep-21-2011]
O02649573 60 kDa heat shock protein yes N/A 0.412 0.567 0.694 1e-142
Q5ZL72573 60 kDa heat shock protein yes N/A 0.626 0.862 0.491 1e-140
P18687573 60 kDa heat shock protein yes N/A 0.412 0.567 0.624 1e-129
P63039573 60 kDa heat shock protein yes N/A 0.412 0.567 0.624 1e-128
P63038573 60 kDa heat shock protein yes N/A 0.412 0.567 0.624 1e-128
Q9VMN5576 60 kDa heat shock protein no N/A 0.412 0.564 0.619 1e-127
P10809573 60 kDa heat shock protein yes N/A 0.412 0.567 0.619 1e-127
P31081573 60 kDa heat shock protein yes N/A 0.412 0.567 0.613 1e-126
Q5NVM5573 60 kDa heat shock protein yes N/A 0.412 0.567 0.611 1e-125
P50140568 Chaperonin homolog Hsp-60 yes N/A 0.620 0.860 0.443 1e-119
>sp|O02649|CH60_DROME 60 kDa heat shock protein, mitochondrial OS=Drosophila melanogaster GN=Hsp60 PE=1 SV=3 Back     alignment and function desciption
 Score =  505 bits (1301), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 259/373 (69%), Positives = 298/373 (79%), Gaps = 48/373 (12%)

Query: 412 KVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKI 471
           KVG++GVITVKDGKTLTDELEVIEGMKFDRGYISPYFIN++KGAKVEFQDAL+LLSE KI
Sbjct: 188 KVGRDGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKI 247

Query: 472 SSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531
           SS+QSIIPALELAN++RKPLVI+AED+DGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK+
Sbjct: 248 SSVQSIIPALELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKS 307

Query: 532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRA 591
           TL D+A+A+GGIVFGD+A  VKLED++ +DLG VGE+VITKDDTL+LKGKGKK+D+ RRA
Sbjct: 308 TLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRA 367

Query: 592 DQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAA 651
           +QI+DQIE TTS+YE+EKLQERLARLASGVA+L+VGGSSEVEVNEKKDRV DALNATRAA
Sbjct: 368 NQIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAA 427

Query: 652 VEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREK 711
           VEEGIVPGGGTALLRCI  L+ +ET N DQ  G                           
Sbjct: 428 VEEGIVPGGGTALLRCIEKLEGVETTNEDQKLG--------------------------- 460

Query: 712 LQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGY 771
                                VEIV++ALR PCMTIA NAGVD ++VV KV   +G+ GY
Sbjct: 461 ---------------------VEIVRRALRMPCMTIAKNAGVDGAMVVAKVENQAGDYGY 499

Query: 772 DAMNNEYVNMIQK 784
           DA+  EY N+I+K
Sbjct: 500 DALKGEYGNLIEK 512
Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
Drosophila melanogaster (taxid: 7227)
>sp|Q5ZL72|CH60_CHICK 60 kDa heat shock protein, mitochondrial OS=Gallus gallus GN=HSPD1 PE=1 SV=1 Back     alignment and function description
>sp|P18687|CH60_CRIGR 60 kDa heat shock protein, mitochondrial OS=Cricetulus griseus GN=HSPD1 PE=2 SV=1 Back     alignment and function description
>sp|P63039|CH60_RAT 60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus GN=Hspd1 PE=1 SV=1 Back     alignment and function description
>sp|P63038|CH60_MOUSE 60 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspd1 PE=1 SV=1 Back     alignment and function description
>sp|Q9VMN5|CH60C_DROME 60 kDa heat shock protein homolog 2, mitochondrial OS=Drosophila melanogaster GN=Hsp60C PE=2 SV=2 Back     alignment and function description
>sp|P10809|CH60_HUMAN 60 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPD1 PE=1 SV=2 Back     alignment and function description
>sp|P31081|CH60_BOVIN 60 kDa heat shock protein, mitochondrial OS=Bos taurus GN=HSPD1 PE=1 SV=2 Back     alignment and function description
>sp|Q5NVM5|CH60_PONAB 60 kDa heat shock protein, mitochondrial OS=Pongo abelii GN=HSPD1 PE=2 SV=1 Back     alignment and function description
>sp|P50140|CH60_CAEEL Chaperonin homolog Hsp-60, mitochondrial OS=Caenorhabditis elegans GN=hsp-60 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query788
395459668575 heat shock protein 60 [Frankliniella occ 0.412 0.565 0.745 1e-149
242016121579 Hsp60 protein, putative [Pediculus human 0.412 0.561 0.737 1e-148
289742771571 heat shock protein 60 [Glossina morsitan 0.626 0.865 0.526 1e-148
157129785574 chaperonin-60kD, ch60 [Aedes aegypti] gi 0.618 0.848 0.516 1e-147
195399117573 GJ15640 [Drosophila virilis] gi|19415059 0.626 0.862 0.528 1e-147
253993196572 heat shock protein 60 [Chilo suppressali 0.412 0.568 0.718 1e-147
170045840573 60 kDa heat shock protein, mitochondrial 0.618 0.849 0.513 1e-146
332019713594 60 kDa heat shock protein, mitochondrial 0.409 0.543 0.723 1e-146
307173631 1514 60 kDa heat shock protein, mitochondrial 0.409 0.213 0.721 1e-146
357629111538 heat shock protein 60 [Danaus plexippus] 0.412 0.604 0.713 1e-145
>gi|395459668|gb|AFN65687.1| heat shock protein 60 [Frankliniella occidentalis] gi|423293166|gb|AFX84618.1| heat shock protein 60 [Frankliniella occidentalis] gi|442769475|gb|AGC70811.1| heat shock protein 60 [Frankliniella occidentalis] Back     alignment and taxonomy information
 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 278/373 (74%), Positives = 297/373 (79%), Gaps = 48/373 (12%)

Query: 412 KVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKI 471
           KVGKEGVITVKDGKTL DELEVIEGMKFDRGYISPYFINTAKGAKVEFQD LVL SE KI
Sbjct: 188 KVGKEGVITVKDGKTLHDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDCLVLFSEKKI 247

Query: 472 SSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531
           SSIQSIIPALELAN+ RKPLVI+AEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA
Sbjct: 248 SSIQSIIPALELANTLRKPLVIVAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 307

Query: 532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRA 591
           TLQD+AVATGGIVFGDE +PVKLED+   DLG VGE +ITKDDTL+LKGKGKK DIDRR+
Sbjct: 308 TLQDMAVATGGIVFGDEGNPVKLEDITKEDLGVVGECLITKDDTLLLKGKGKKADIDRRS 367

Query: 592 DQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAA 651
           DQIRDQIE TTS+YE+EKLQERLARLASGVAVL+VGGSSEVEVNEKKDRV DAL ATRAA
Sbjct: 368 DQIRDQIENTTSEYEKEKLQERLARLASGVAVLRVGGSSEVEVNEKKDRVNDALCATRAA 427

Query: 652 VEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREK 711
           VEEGIVPGGGTALLRCI  LD L  AN DQ TG                           
Sbjct: 428 VEEGIVPGGGTALLRCITSLDSLSLANNDQKTG--------------------------- 460

Query: 712 LQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGY 771
                                V IV+KALRQPCM IA NAGV+ASV+V+KV E  G+MGY
Sbjct: 461 ---------------------VNIVRKALRQPCMQIAMNAGVEASVIVSKVEEGKGDMGY 499

Query: 772 DAMNNEYVNMIQK 784
           DA+NNE+VNMI+K
Sbjct: 500 DALNNEFVNMIEK 512

Source: Frankliniella occidentalis

Species: Frankliniella occidentalis

Genus: Frankliniella

Family: Thripidae

Order: Thysanoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|242016121|ref|XP_002428684.1| Hsp60 protein, putative [Pediculus humanus corporis] gi|212513355|gb|EEB15946.1| Hsp60 protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|289742771|gb|ADD20133.1| heat shock protein 60 [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|157129785|ref|XP_001661764.1| chaperonin-60kD, ch60 [Aedes aegypti] gi|108872102|gb|EAT36327.1| AAEL011584-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|195399117|ref|XP_002058167.1| GJ15640 [Drosophila virilis] gi|194150591|gb|EDW66275.1| GJ15640 [Drosophila virilis] Back     alignment and taxonomy information
>gi|253993196|gb|ACT52824.1| heat shock protein 60 [Chilo suppressalis] Back     alignment and taxonomy information
>gi|170045840|ref|XP_001850501.1| 60 kDa heat shock protein, mitochondrial [Culex quinquefasciatus] gi|167868729|gb|EDS32112.1| 60 kDa heat shock protein, mitochondrial [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|332019713|gb|EGI60183.1| 60 kDa heat shock protein, mitochondrial [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307173631|gb|EFN64482.1| 60 kDa heat shock protein, mitochondrial [Camponotus floridanus] Back     alignment and taxonomy information
>gi|357629111|gb|EHJ78090.1| heat shock protein 60 [Danaus plexippus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query788
FB|FBgn0015245573 Hsp60 "Heat shock protein 60" 0.346 0.476 0.761 3e-193
UNIPROTKB|P10809573 HSPD1 "60 kDa heat shock prote 0.458 0.630 0.564 2.4e-175
FB|FBgn0031728576 Hsp60C "Hsp60C" [Drosophila me 0.346 0.473 0.706 1.7e-172
UNIPROTKB|Q5ZL72573 HSPD1 "60 kDa heat shock prote 0.439 0.603 0.590 1.1e-168
MGI|MGI:96242573 Hspd1 "heat shock protein 1 (c 0.439 0.603 0.587 2.2e-166
RGD|621314573 Hspd1 "heat shock protein 1 (c 0.439 0.603 0.587 2.2e-166
UNIPROTKB|P63039573 Hspd1 "60 kDa heat shock prote 0.439 0.603 0.587 2.2e-166
UNIPROTKB|F1MUZ9573 HSPD1 "60 kDa heat shock prote 0.439 0.603 0.581 1.2e-165
ZFIN|ZDB-GENE-021206-1575 hspd1 "heat shock 60kD protein 0.439 0.601 0.587 1.5e-165
UNIPROTKB|E2QUU5573 HSPD1 "60 kDa heat shock prote 0.439 0.603 0.581 1.5e-165
FB|FBgn0015245 Hsp60 "Heat shock protein 60" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1038 (370.5 bits), Expect = 3.0e-193, Sum P(4) = 3.0e-193
 Identities = 208/273 (76%), Positives = 234/273 (85%)

Query:   412 KVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLXXXXX 471
             KVG++GVITVKDGKTLTDELEVIEGMKFDRGYISPYFIN++KGAKVEFQDAL+LL     
Sbjct:   188 KVGRDGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKI 247

Query:   472 XXXXXXXPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531
                    PALELAN++RKPLVI+AED+DGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK+
Sbjct:   248 SSVQSIIPALELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKS 307

Query:   532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEXXXXXX 591
             TL D+A+A+GGIVFGD+A  VKLED++ +DLG VGE+VITKDDTL+LKGKGKK+      
Sbjct:   308 TLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRA 367

Query:   592 XXXXXXXEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAA 651
                    E TTS+YE+EKLQERLARLASGVA+L+VGGSSEVEVNEKKDRV DALNATRAA
Sbjct:   368 NQIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAA 427

Query:   652 VEEGIVPGGGTALLRCIAVLDKLETANADQATG 684
             VEEGIVPGGGTALLRCI  L+ +ET N DQ  G
Sbjct:   428 VEEGIVPGGGTALLRCIEKLEGVETTNEDQKLG 460
GO:0005739 "mitochondrion" evidence=IDA
GO:0009408 "response to heat" evidence=IEP;ISS;NAS
GO:0051082 "unfolded protein binding" evidence=ISS
GO:0006457 "protein folding" evidence=ISS
GO:0005759 "mitochondrial matrix" evidence=ISS
GO:0006458 "'de novo' protein folding" evidence=ISS
GO:0006626 "protein targeting to mitochondrion" evidence=ISS
GO:0042026 "protein refolding" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
GO:0005875 "microtubule associated complex" evidence=IDA
GO:0034605 "cellular response to heat" evidence=IEP
GO:0005743 "mitochondrial inner membrane" evidence=IDA
GO:0007005 "mitochondrion organization" evidence=IMP
UNIPROTKB|P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0031728 Hsp60C "Hsp60C" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZL72 HSPD1 "60 kDa heat shock protein, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:96242 Hspd1 "heat shock protein 1 (chaperonin)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621314 Hspd1 "heat shock protein 1 (chaperonin)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P63039 Hspd1 "60 kDa heat shock protein, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MUZ9 HSPD1 "60 kDa heat shock protein, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-021206-1 hspd1 "heat shock 60kD protein 1 (chaperonin)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2QUU5 HSPD1 "60 kDa heat shock protein, mitochondrial" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5B041HSP60_EMENINo assigned EC number0.53450.40860.5476yesN/A
P10809CH60_HUMANNo assigned EC number0.61930.41240.5671yesN/A
Q1GRD4CH602_SPHALNo assigned EC number0.50130.40980.5992yesN/A
P63038CH60_MOUSENo assigned EC number0.62460.41240.5671yesN/A
P63039CH60_RATNo assigned EC number0.62460.41240.5671yesN/A
P29197CH60A_ARATHNo assigned EC number0.51200.40980.5597yesN/A
A8I5R5CH602_AZOC5No assigned EC number0.51610.40860.5940yesN/A
O02649CH60_DROMENo assigned EC number0.69430.41240.5671yesN/A
P50140CH60_CAEELNo assigned EC number0.44350.62050.8609yesN/A
Q0AS40CH60_MARMMNo assigned EC number0.51070.40860.5843yesN/A
B2ICU4CH60_BEII9No assigned EC number0.50130.40980.5894yesN/A
Q20X88CH602_RHOPBNo assigned EC number0.41120.60400.8638yesN/A
Q5NVM5CH60_PONABNo assigned EC number0.61120.41240.5671yesN/A
Q5ZL72CH60_CHICKNo assigned EC number0.49160.62690.8621yesN/A
P19882HSP60_YEASTNo assigned EC number0.5040.40860.5629yesN/A
Q3SQJ5CH602_NITWNNo assigned EC number0.50800.41110.5944yesN/A
P31081CH60_BOVINNo assigned EC number0.61390.41240.5671yesN/A
Q07TB7CH601_RHOP5No assigned EC number0.51330.41110.5923yesN/A
P18687CH60_CRIGRNo assigned EC number0.62460.41240.5671yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query788
cd03344520 cd03344, GroEL, GroEL_like type I chaperonin 1e-173
PRK00013542 PRK00013, groEL, chaperonin GroEL; Reviewed 1e-148
PTZ00114555 PTZ00114, PTZ00114, Heat shock protein 60; Provisi 1e-146
PRK12849542 PRK12849, groEL, chaperonin GroEL; Reviewed 1e-143
TIGR02348524 TIGR02348, GroEL, chaperonin GroL 1e-131
PRK12850544 PRK12850, groEL, chaperonin GroEL; Reviewed 1e-125
PRK12851541 PRK12851, groEL, chaperonin GroEL; Reviewed 1e-119
PRK12852545 PRK12852, groEL, chaperonin GroEL; Reviewed 1e-119
PRK14104546 PRK14104, PRK14104, chaperonin GroEL; Provisional 1e-106
cd03344520 cd03344, GroEL, GroEL_like type I chaperonin 1e-94
CHL00093529 CHL00093, groEL, chaperonin GroEL 5e-92
PTZ00114555 PTZ00114, PTZ00114, Heat shock protein 60; Provisi 7e-81
PRK00013542 PRK00013, groEL, chaperonin GroEL; Reviewed 3e-80
PLN03167600 PLN03167, PLN03167, Chaperonin-60 beta subunit; Pr 5e-79
PRK12849542 PRK12849, groEL, chaperonin GroEL; Reviewed 8e-75
TIGR02348524 TIGR02348, GroEL, chaperonin GroL 2e-70
COG0459524 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po 2e-68
PRK12850544 PRK12850, groEL, chaperonin GroEL; Reviewed 5e-64
PRK12851541 PRK12851, groEL, chaperonin GroEL; Reviewed 5e-59
PRK12852545 PRK12852, groEL, chaperonin GroEL; Reviewed 2e-58
PRK14104546 PRK14104, PRK14104, chaperonin GroEL; Provisional 3e-52
cd00309464 cd00309, chaperonin_type_I_II, chaperonin families 3e-52
CHL00093529 CHL00093, groEL, chaperonin GroEL 3e-47
COG0459524 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po 1e-44
cd00309464 cd00309, chaperonin_type_I_II, chaperonin families 1e-43
pfam00118481 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin fami 2e-40
PLN03167600 PLN03167, PLN03167, Chaperonin-60 beta subunit; Pr 5e-39
pfam00118481 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin fami 2e-36
cd03333209 cd03333, chaperonin_like, chaperonin_like superfam 8e-29
cd03344520 cd03344, GroEL, GroEL_like type I chaperonin 6e-18
PTZ00114555 PTZ00114, PTZ00114, Heat shock protein 60; Provisi 7e-15
PRK12849542 PRK12849, groEL, chaperonin GroEL; Reviewed 4e-14
PRK00013542 PRK00013, groEL, chaperonin GroEL; Reviewed 4e-13
PRK12850544 PRK12850, groEL, chaperonin GroEL; Reviewed 2e-12
TIGR02348524 TIGR02348, GroEL, chaperonin GroL 3e-12
PRK12850544 PRK12850, groEL, chaperonin GroEL; Reviewed 5e-12
PRK12852545 PRK12852, groEL, chaperonin GroEL; Reviewed 2e-11
PRK12851541 PRK12851, groEL, chaperonin GroEL; Reviewed 6e-11
PRK12852545 PRK12852, groEL, chaperonin GroEL; Reviewed 1e-10
cd03343517 cd03343, cpn60, cpn60 chaperonin family 6e-10
PLN03167600 PLN03167, PLN03167, Chaperonin-60 beta subunit; Pr 1e-08
TIGR02339519 TIGR02339, thermosome_arch, thermosome, various su 1e-08
CHL00093529 CHL00093, groEL, chaperonin GroEL 1e-07
COG0459524 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po 4e-07
TIGR02343532 TIGR02343, chap_CCT_epsi, T-complex protein 1, eps 5e-07
cd03339526 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic ty 8e-06
TIGR02345523 TIGR02345, chap_CCT_eta, T-complex protein 1, eta 1e-05
PTZ00212533 PTZ00212, PTZ00212, T-complex protein 1 subunit be 2e-05
COG0459524 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po 4e-05
cd03340522 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type I 5e-05
cd00309464 cd00309, chaperonin_type_I_II, chaperonin families 6e-05
TIGR02341518 TIGR02341, chap_CCT_beta, T-complex protein 1, bet 7e-05
cd03338515 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type 1e-04
cd03336517 cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type 1e-04
PLN03167600 PLN03167, PLN03167, Chaperonin-60 beta subunit; Pr 2e-04
TIGR02340536 TIGR02340, chap_CCT_alpha, T-complex protein 1, al 4e-04
cd03335527 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type 5e-04
cd03333209 cd03333, chaperonin_like, chaperonin_like superfam 6e-04
TIGR02344525 TIGR02344, chap_CCT_gamma, T-complex protein 1, ga 6e-04
cd03337480 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type 9e-04
cd03342484 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type 0.001
>gnl|CDD|239460 cd03344, GroEL, GroEL_like type I chaperonin Back     alignment and domain information 
 Score =  508 bits (1311), Expect = e-173
 Identities = 200/373 (53%), Positives = 249/373 (66%), Gaps = 49/373 (13%)

Query: 412 KVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKI 471
           KVGK+GVITV++GKTL  ELEV+EGM+FDRGY+SPYF+   +  +VE ++  +LL++ KI
Sbjct: 165 KVGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKI 224

Query: 472 SSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531
           SSIQ ++P LEL     +PL+I+AEDV+GEAL+TLVVN+L+ GL+V AVKAPGFGD RKA
Sbjct: 225 SSIQELLPILELVAKAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKA 284

Query: 532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRA 591
            L+D+A+ TGG V  +E   +KLED+   DLG   ++V+TKDDT I+ G G K  I  R 
Sbjct: 285 MLEDIAILTGGTVISEELG-LKLEDVTLEDLGRAKKVVVTKDDTTIIGGAGDKAAIKARI 343

Query: 592 DQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAA 651
            QIR QIE TTSDY++EKLQERLA+L+ GVAV+KVGG++EVE+ EKKDRV DALNATRAA
Sbjct: 344 AQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALNATRAA 403

Query: 652 VEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREK 711
           VEEGIVPGGG ALLR    LDKL+  N D+  G                           
Sbjct: 404 VEEGIVPGGGVALLRASPALDKLKALNGDEKLG--------------------------- 436

Query: 712 LQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGY 771
                                +EIV++AL  P   IA NAGVD SVVV KVLES    GY
Sbjct: 437 ---------------------IEIVRRALEAPLRQIAENAGVDGSVVVEKVLESPDGFGY 475

Query: 772 DAMNNEYVNMIQK 784
           DA   EYV+MI+ 
Sbjct: 476 DAATGEYVDMIEA 488

Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis. Length = 520
>gnl|CDD|234573 PRK00013, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|185455 PTZ00114, PTZ00114, Heat shock protein 60; Provisional Back     alignment and domain information
>gnl|CDD|237230 PRK12849, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|233828 TIGR02348, GroEL, chaperonin GroL Back     alignment and domain information
>gnl|CDD|237231 PRK12850, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|171770 PRK12851, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|237232 PRK12852, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|172594 PRK14104, PRK14104, chaperonin GroEL; Provisional Back     alignment and domain information
>gnl|CDD|239460 cd03344, GroEL, GroEL_like type I chaperonin Back     alignment and domain information
>gnl|CDD|177025 CHL00093, groEL, chaperonin GroEL Back     alignment and domain information
>gnl|CDD|185455 PTZ00114, PTZ00114, Heat shock protein 60; Provisional Back     alignment and domain information
>gnl|CDD|234573 PRK00013, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|215611 PLN03167, PLN03167, Chaperonin-60 beta subunit; Provisional Back     alignment and domain information
>gnl|CDD|237230 PRK12849, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|233828 TIGR02348, GroEL, chaperonin GroL Back     alignment and domain information
>gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|237231 PRK12850, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|171770 PRK12851, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|237232 PRK12852, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|172594 PRK14104, PRK14104, chaperonin GroEL; Provisional Back     alignment and domain information
>gnl|CDD|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II Back     alignment and domain information
>gnl|CDD|177025 CHL00093, groEL, chaperonin GroEL Back     alignment and domain information
>gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II Back     alignment and domain information
>gnl|CDD|215730 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin family Back     alignment and domain information
>gnl|CDD|215611 PLN03167, PLN03167, Chaperonin-60 beta subunit; Provisional Back     alignment and domain information
>gnl|CDD|215730 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin family Back     alignment and domain information
>gnl|CDD|239449 cd03333, chaperonin_like, chaperonin_like superfamily Back     alignment and domain information
>gnl|CDD|239460 cd03344, GroEL, GroEL_like type I chaperonin Back     alignment and domain information
>gnl|CDD|185455 PTZ00114, PTZ00114, Heat shock protein 60; Provisional Back     alignment and domain information
>gnl|CDD|237230 PRK12849, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|234573 PRK00013, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|237231 PRK12850, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|233828 TIGR02348, GroEL, chaperonin GroL Back     alignment and domain information
>gnl|CDD|237231 PRK12850, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|237232 PRK12852, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|171770 PRK12851, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|237232 PRK12852, groEL, chaperonin GroEL; Reviewed Back     alignment and domain information
>gnl|CDD|239459 cd03343, cpn60, cpn60 chaperonin family Back     alignment and domain information
>gnl|CDD|215611 PLN03167, PLN03167, Chaperonin-60 beta subunit; Provisional Back     alignment and domain information
>gnl|CDD|233823 TIGR02339, thermosome_arch, thermosome, various subunits, archaeal Back     alignment and domain information
>gnl|CDD|177025 CHL00093, groEL, chaperonin GroEL Back     alignment and domain information
>gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|131396 TIGR02343, chap_CCT_epsi, T-complex protein 1, epsilon subunit Back     alignment and domain information
>gnl|CDD|239455 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit Back     alignment and domain information
>gnl|CDD|200176 TIGR02345, chap_CCT_eta, T-complex protein 1, eta subunit Back     alignment and domain information
>gnl|CDD|185514 PTZ00212, PTZ00212, T-complex protein 1 subunit beta; Provisional Back     alignment and domain information
>gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|239456 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit Back     alignment and domain information
>gnl|CDD|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II Back     alignment and domain information
>gnl|CDD|211733 TIGR02341, chap_CCT_beta, T-complex protein 1, beta subunit Back     alignment and domain information
>gnl|CDD|239454 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit Back     alignment and domain information
>gnl|CDD|239452 cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit Back     alignment and domain information
>gnl|CDD|215611 PLN03167, PLN03167, Chaperonin-60 beta subunit; Provisional Back     alignment and domain information
>gnl|CDD|131393 TIGR02340, chap_CCT_alpha, T-complex protein 1, alpha subunit Back     alignment and domain information
>gnl|CDD|239451 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit Back     alignment and domain information
>gnl|CDD|239449 cd03333, chaperonin_like, chaperonin_like superfamily Back     alignment and domain information
>gnl|CDD|233825 TIGR02344, chap_CCT_gamma, T-complex protein 1, gamma subunit Back     alignment and domain information
>gnl|CDD|239453 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit Back     alignment and domain information
>gnl|CDD|239458 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 788
KOG0356|consensus550 100.0
PLN03167600 Chaperonin-60 beta subunit; Provisional 100.0
PRK14104546 chaperonin GroEL; Provisional 100.0
PRK12852545 groEL chaperonin GroEL; Reviewed 100.0
PTZ00114555 Heat shock protein 60; Provisional 100.0
CHL00093529 groEL chaperonin GroEL 100.0
TIGR02348524 GroEL chaperonin GroL. This family consists of Gro 100.0
PRK12850544 groEL chaperonin GroEL; Reviewed 100.0
PRK12851541 groEL chaperonin GroEL; Reviewed 100.0
PRK00013542 groEL chaperonin GroEL; Reviewed 100.0
PRK12849542 groEL chaperonin GroEL; Reviewed 100.0
cd03344520 GroEL GroEL_like type I chaperonin. Chaperonins ar 100.0
COG0459524 GroL Chaperonin GroEL (HSP60 family) [Posttranslat 100.0
cd03338515 TCP1_delta TCP-1 (CTT or eukaryotic type II) chape 100.0
cd03342484 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaper 100.0
cd03343517 cpn60 cpn60 chaperonin family. Chaperonins are inv 100.0
TIGR02345522 chap_CCT_eta T-complex protein 1, eta subunit. Mem 100.0
TIGR02346531 chap_CCT_theta T-complex protein 1, theta subunit. 100.0
TIGR02340536 chap_CCT_alpha T-complex protein 1, alpha subunit. 100.0
TIGR02342517 chap_CCT_delta T-complex protein 1, delta subunit. 100.0
cd03339526 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) cha 100.0
TIGR02339519 thermosome_arch thermosome, various subunits, arch 100.0
TIGR02347531 chap_CCT_zeta T-complex protein 1, zeta subunit. M 100.0
cd03335527 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chape 100.0
TIGR02343532 chap_CCT_epsi T-complex protein 1, epsilon subunit 100.0
PTZ00212533 T-complex protein 1 subunit beta; Provisional 100.0
TIGR02341519 chap_CCT_beta T-complex protein 1, beta subunit. M 100.0
cd03341472 TCP1_theta TCP-1 (CTT or eukaryotic type II) chape 100.0
cd03336517 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaper 100.0
cd00309464 chaperonin_type_I_II chaperonin families, type I a 100.0
TIGR02344525 chap_CCT_gamma T-complex protein 1, gamma subunit. 100.0
cd03340522 TCP1_eta TCP-1 (CTT or eukaryotic type II) chapero 100.0
cd03337480 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chape 100.0
PF00118485 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperon 100.0
KOG0358|consensus534 100.0
KOG0359|consensus520 100.0
KOG0356|consensus550 100.0
KOG0360|consensus545 100.0
KOG0363|consensus527 100.0
KOG0361|consensus543 100.0
KOG0362|consensus537 99.96
KOG0364|consensus527 99.93
PLN03167 600 Chaperonin-60 beta subunit; Provisional 99.93
PRK14104 546 chaperonin GroEL; Provisional 99.91
PRK12852 545 groEL chaperonin GroEL; Reviewed 99.89
CHL00093529 groEL chaperonin GroEL 99.89
KOG0357|consensus400 99.89
PRK00013 542 groEL chaperonin GroEL; Reviewed 99.87
TIGR02348524 GroEL chaperonin GroL. This family consists of Gro 99.86
PRK12850 544 groEL chaperonin GroEL; Reviewed 99.86
PTZ00114 555 Heat shock protein 60; Provisional 99.85
PRK12849 542 groEL chaperonin GroEL; Reviewed 99.85
PRK12851541 groEL chaperonin GroEL; Reviewed 99.84
cd03344520 GroEL GroEL_like type I chaperonin. Chaperonins ar 99.82
cd03333209 chaperonin_like chaperonin_like superfamily. Chape 99.78
COG0459524 GroL Chaperonin GroEL (HSP60 family) [Posttranslat 99.77
TIGR02342517 chap_CCT_delta T-complex protein 1, delta subunit. 99.05
cd03338515 TCP1_delta TCP-1 (CTT or eukaryotic type II) chape 99.03
cd00309464 chaperonin_type_I_II chaperonin families, type I a 98.95
cd03334261 Fab1_TCP TCP-1 like domain of the eukaryotic phosp 98.89
TIGR02345522 chap_CCT_eta T-complex protein 1, eta subunit. Mem 98.88
cd03340522 TCP1_eta TCP-1 (CTT or eukaryotic type II) chapero 98.86
TIGR02346531 chap_CCT_theta T-complex protein 1, theta subunit. 98.85
cd03343517 cpn60 cpn60 chaperonin family. Chaperonins are inv 98.72
cd03342484 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaper 98.71
TIGR02340536 chap_CCT_alpha T-complex protein 1, alpha subunit. 98.55
TIGR02339519 thermosome_arch thermosome, various subunits, arch 98.52
cd03339526 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) cha 98.4
cd03335527 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chape 98.4
PTZ00212533 T-complex protein 1 subunit beta; Provisional 98.38
TIGR02347531 chap_CCT_zeta T-complex protein 1, zeta subunit. M 98.27
cd03336517 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaper 98.16
TIGR02341519 chap_CCT_beta T-complex protein 1, beta subunit. M 98.09
TIGR02343532 chap_CCT_epsi T-complex protein 1, epsilon subunit 98.05
TIGR02344525 chap_CCT_gamma T-complex protein 1, gamma subunit. 97.97
cd03341472 TCP1_theta TCP-1 (CTT or eukaryotic type II) chape 97.82
cd03337480 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chape 97.82
PF00118485 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperon 97.27
cd03333209 chaperonin_like chaperonin_like superfamily. Chape 96.3
KOG0363|consensus527 94.15
KOG0361|consensus543 91.36
>KOG0356|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.3e-110  Score=920.33  Aligned_cols=468  Identities=73%  Similarity=1.068  Sum_probs=455.3

Q ss_pred             eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622          7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK   86 (788)
Q Consensus         7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~   86 (788)
                      ++..+++  +||+|||++|.+++|.|+|||||+|++++++|.|+++|.||++++++++++|+.+||||||+++||++|..
T Consensus        37 adav~~T--lgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~~tN~~agdGtttatvlar~i~~  114 (550)
T KOG0356|consen   37 ADAVAVT--LGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK  114 (550)
T ss_pred             HHHhhhh--ccCCcceEEcccccCCCceecCCceeeccccccchhhhhccHHHHHHHhhccCccccCcchHHHHHHHHHH
Confidence            4456666  99999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccceee
Q psy14622         87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVL  166 (788)
Q Consensus        87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~IL  166 (788)
                      +|++.+++|.+|++|++|+.+|++.+.+.|+++++||++.+++.+||++|+|+|.++|++|++||.+             
T Consensus       115 eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAtiSAngD~~ig~li~~a~~k-------------  181 (550)
T KOG0356|consen  115 EGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATISANGDKEIGNLISDAMKK-------------  181 (550)
T ss_pred             HHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhcCCcHHHHHHHHHHHHH-------------
Confidence            9999999999999999999999999999999999999999999999999999999999999999987             


Q ss_pred             eccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccc
Q psy14622        167 LSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQG  246 (788)
Q Consensus       167 ite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~  246 (788)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (550)
T KOG0356|consen  182 --------------------------------------------------------------------------------  181 (550)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEeee
Q psy14622        247 VDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVG  326 (788)
Q Consensus       247 ~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  326 (788)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (550)
T KOG0356|consen  182 --------------------------------------------------------------------------------  181 (550)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHH
Q psy14622        327 KEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTY  406 (788)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (788)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (550)
T KOG0356|consen  182 --------------------------------------------------------------------------------  181 (550)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHh
Q psy14622        407 IYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANS  486 (788)
Q Consensus       407 ~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~  486 (788)
                            ||++|+|++++|++++|+++++|||+|||||+||||+|++++++++|++|++|++++||+++++|+|+||.+.+
T Consensus       182 ------vG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki~~v~~ivp~LE~A~~  255 (550)
T KOG0356|consen  182 ------VGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKISSVQSIVPALELALA  255 (550)
T ss_pred             ------hCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhhhHHHHHhHHHHHhhh
Confidence                  89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCC-CcccccCcccccce
Q psy14622        487 KRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASP-VKLEDLQATDLGSV  565 (788)
Q Consensus       487 ~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g-~~l~~v~~~~LG~a  565 (788)
                      ..+|||||||||++|||++|++|++++.++|||||+|||||+|++.|+|||++|||+++.++ .+ ++|+++++++||.+
T Consensus       256 ~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e-~~~l~le~~~~~dLG~~  334 (550)
T KOG0356|consen  256 KRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEE-LSTLNLEDAKLEDLGEV  334 (550)
T ss_pred             ccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccc-hhhcccccCchhhcCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999 55 89999999999999


Q ss_pred             eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622        566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL  645 (788)
Q Consensus       566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl  645 (788)
                      .+|++|+|+|+++.|.+++++++.||+|++.+++.+.++|++++|+||+++|+||+|+|+|||.||+|++|||+|++|||
T Consensus       335 ~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~dal  414 (550)
T KOG0356|consen  335 GEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDAL  414 (550)
T ss_pred             eeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeE
Q psy14622        646 NATRAAVEEGIVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVA  724 (788)
Q Consensus       646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggva  724 (788)
                      ||+|+|+++|||||||+|||||+..|+.++. .++++..|                                        
T Consensus       415 nat~aaveeGivpGGG~all~~~~~l~~lk~~~~~~~k~G----------------------------------------  454 (550)
T KOG0356|consen  415 NATRAAVEEGIVPGGGTALLRAIPVLDELKATNNFDQKVG----------------------------------------  454 (550)
T ss_pred             HHHHHHhhcCcccCCchHHHHhhhhhhhcccccchHhhhh----------------------------------------
Confidence            9999999999999999999999999999875 56666666                                        


Q ss_pred             EEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622        725 VLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL  786 (788)
Q Consensus       725 vi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi  786 (788)
                              ++++.++++.|..++|.||++++.+|++|++.  .++|||+++++|+||+++||
T Consensus       455 --------~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~--~~~gyda~~~ey~dlv~~Gi  506 (550)
T KOG0356|consen  455 --------VEIVKKALRLPAQTIAKNAGVDGSVVVEKVLN--DDYGYDAAKGEYVDLVEAGI  506 (550)
T ss_pred             --------HHHHHHHHhhhHHHHHHhcCCchHHHHHHHHh--hhhhhhhhcccHHHHHhccC
Confidence                    99999999999999999999999999999994  48999999999999999997

>PLN03167 Chaperonin-60 beta subunit; Provisional Back     alignment and domain information
>PRK14104 chaperonin GroEL; Provisional Back     alignment and domain information
>PRK12852 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>PTZ00114 Heat shock protein 60; Provisional Back     alignment and domain information
>CHL00093 groEL chaperonin GroEL Back     alignment and domain information
>TIGR02348 GroEL chaperonin GroL Back     alignment and domain information
>PRK12850 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>PRK12851 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>PRK00013 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>PRK12849 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>cd03344 GroEL GroEL_like type I chaperonin Back     alignment and domain information
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit Back     alignment and domain information
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit Back     alignment and domain information
>cd03343 cpn60 cpn60 chaperonin family Back     alignment and domain information
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit Back     alignment and domain information
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit Back     alignment and domain information
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit Back     alignment and domain information
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit Back     alignment and domain information
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit Back     alignment and domain information
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal Back     alignment and domain information
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit Back     alignment and domain information
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit Back     alignment and domain information
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit Back     alignment and domain information
>PTZ00212 T-complex protein 1 subunit beta; Provisional Back     alignment and domain information
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit Back     alignment and domain information
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit Back     alignment and domain information
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit Back     alignment and domain information
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II Back     alignment and domain information
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit Back     alignment and domain information
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit Back     alignment and domain information
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit Back     alignment and domain information
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism Back     alignment and domain information
>KOG0358|consensus Back     alignment and domain information
>KOG0359|consensus Back     alignment and domain information
>KOG0356|consensus Back     alignment and domain information
>KOG0360|consensus Back     alignment and domain information
>KOG0363|consensus Back     alignment and domain information
>KOG0361|consensus Back     alignment and domain information
>KOG0362|consensus Back     alignment and domain information
>KOG0364|consensus Back     alignment and domain information
>PLN03167 Chaperonin-60 beta subunit; Provisional Back     alignment and domain information
>PRK14104 chaperonin GroEL; Provisional Back     alignment and domain information
>PRK12852 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>CHL00093 groEL chaperonin GroEL Back     alignment and domain information
>KOG0357|consensus Back     alignment and domain information
>PRK00013 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>TIGR02348 GroEL chaperonin GroL Back     alignment and domain information
>PRK12850 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>PTZ00114 Heat shock protein 60; Provisional Back     alignment and domain information
>PRK12849 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>PRK12851 groEL chaperonin GroEL; Reviewed Back     alignment and domain information
>cd03344 GroEL GroEL_like type I chaperonin Back     alignment and domain information
>cd03333 chaperonin_like chaperonin_like superfamily Back     alignment and domain information
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit Back     alignment and domain information
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit Back     alignment and domain information
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II Back     alignment and domain information
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 Back     alignment and domain information
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit Back     alignment and domain information
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit Back     alignment and domain information
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit Back     alignment and domain information
>cd03343 cpn60 cpn60 chaperonin family Back     alignment and domain information
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit Back     alignment and domain information
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit Back     alignment and domain information
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal Back     alignment and domain information
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit Back     alignment and domain information
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit Back     alignment and domain information
>PTZ00212 T-complex protein 1 subunit beta; Provisional Back     alignment and domain information
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit Back     alignment and domain information
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit Back     alignment and domain information
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit Back     alignment and domain information
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit Back     alignment and domain information
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit Back     alignment and domain information
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit Back     alignment and domain information
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit Back     alignment and domain information
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism Back     alignment and domain information
>cd03333 chaperonin_like chaperonin_like superfamily Back     alignment and domain information
>KOG0363|consensus Back     alignment and domain information
>KOG0361|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query788
1iok_A545 Crystal Structure Of Chaperonin-60 From Paracoccus 6e-79
1kp8_A547 Structural Basis For Groel-Assisted Protein Folding 6e-75
3c9v_A526 C7 Symmetrized Structure Of Unliganded Groel At 4.7 2e-74
1pcq_A524 Crystal Structure Of Groel-Groes Length = 524 2e-74
2yey_A524 Crystal Structure Of The Allosteric-Defective Chape 2e-74
1sx3_A525 Groel14-(Atpgammas)14 Length = 525 2e-74
1ss8_A524 Groel Length = 524 2e-74
1gr5_A547 Solution Structure Of Apo Groel By Cryo-Electron Mi 3e-74
1aon_A547 Crystal Structure Of The Asymmetric Chaperonin Comp 3e-74
1we3_A543 Crystal Structure Of The Chaperonin Complex Cpn60CP 4e-74
2eu1_A548 Crystal Structure Of The Chaperonin Groel-E461k Len 4e-74
1j4z_A547 Structural And Mechanistic Basis For Allostery In T 5e-74
1grl_A548 The Crystal Structure Of The Bacterial Chaperonin G 1e-73
3cau_A526 D7 Symmetrized Structure Of Unliganded Groel At 4.2 1e-73
1oel_A547 Conformational Variability In The Refined Structure 1e-73
4aaq_A548 Atp-Triggered Molecular Mechanics Of The Chaperonin 2e-73
1sjp_A504 Mycobacterium Tuberculosis Chaperonin60.2 Length = 5e-61
3rtk_A546 Crystal Structure Of Cpn60.2 From Mycobacterium Tub 5e-61
1la1_A192 Gro-El Fragment (Apical Domain) Comprising Residues 4e-43
1fya_A193 Crystal Structure Of The Hexa-Substituted Mutant Of 4e-42
1fy9_A193 Crystal Structure Of The Hexa-Substituted Mutant Of 4e-42
1kid_A203 Groel (Hsp60 Class) Fragment (Apical Domain) Compri 4e-41
3osx_A201 Crystal Structure Of Apical Domain Of Insecticidal 6e-41
3m6c_A194 Crystal Structure Of Mycobacterium Tuberculosis Gro 1e-34
1jon_A155 Groel (Hsp60 Class) Fragment Comprising Residues 19 2e-32
1dk7_A146 Crystal Structure Of An Isolated Apical Domain Of G 5e-32
1srv_A145 Thermus Thermophilus Groel (Hsp60 Class) Fragment ( 2e-29
1q3r_A548 Crystal Structure Of The Chaperonin From Thermococc 5e-08
1q2v_A548 Crystal Structure Of The Chaperonin From Thermococc 4e-07
1q3s_A548 Crystal Structure Of The Chaperonin From Thermococc 6e-07
3p9d_E562 The Crystal Structure Of Yeast Cct Reveals Intrinsi 2e-06
3aq1_B500 Open State Monomer Of A Group Ii Chaperonin From Me 7e-06
1a6d_B543 Thermosome From T. Acidophilum Length = 543 2e-05
1a6d_A545 Thermosome From T. Acidophilum Length = 545 6e-05
3iyg_E515 Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST 7e-05
3ko1_A553 Cystal Structure Of Thermosome From Acidianus Tengc 2e-04
3izn_A491 Mm-Cpn Deltalid With Atp Length = 491 6e-04
3izi_A513 Mm-Cpn Rls With Atp Length = 513 6e-04
3los_A543 Atomic Model Of Mm-Cpn In The Closed State Length = 6e-04
3izh_A513 Mm-Cpn D386a With Atp Length = 513 6e-04
3iyf_A521 Atomic Model Of The Lidless Mm-Cpn In The Open Stat 6e-04
3izk_A491 Mm-Cpn Rls Deltalid With Atp Length = 491 6e-04
3j02_A491 Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Boun 6e-04
3rus_A543 Crystal Structure Of Cpn-Rls In Complex With Adp Fr 6e-04
>pdb|1IOK|A Chain A, Crystal Structure Of Chaperonin-60 From Paracoccus Denitrificans Length = 545 Back     alignment and structure 
Iteration: 1

 Score =  292 bits (747), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 171/386 (44%), Positives = 228/386 (59%), Gaps = 51/386 (13%)
Query: 400 EYYIQTYIYLCL-KVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVE 458
           E +I   I   + +VG EGVITV++ K +  E+EV+EGM+FDRGY+SPYF+  A     E
Sbjct: 155 ESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAE 214
Query: 459 FQDALVLLXXXXXXXXXXXXPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVA 518
            +DA +LL            P LE     +KPL+I+AEDV+GEAL+TLVVN+L+ GL++A
Sbjct: 215 LEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIA 274
Query: 519 AVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLIL 578
           AVKAPGFGD RKA LQD+A+ TGG V  ++   +KLE++    LG   ++ I KD+T I+
Sbjct: 275 AVKAPGFGDRRKAMLQDIAILTGGQVISEDLG-MKLENVTIDMLGRAKKVSINKDNTTIV 333
Query: 579 KGKGKKEXXXXXXXXXXXXXEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKK 638
            G G+K              E TTSDY+REKLQER+A+LA GVAV++VGG +E+EV E+K
Sbjct: 334 DGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERK 393
Query: 639 DRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEXXXXXXXXXXX 698
           DRV DALNATRAAV+EGIV GGG AL++   VL+ L  AN+DQ  G              
Sbjct: 394 DRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAG-------------- 439
Query: 699 XXEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVV 758
                                             + I+++AL  P   IA NAGVD +VV
Sbjct: 440 ----------------------------------IAIIRRALEAPMRQIAENAGVDGAVV 465
Query: 759 VNKVLESSGE-MGYDAMNNEYVNMIQ 783
             KV ESS +  G++A   EY +M +
Sbjct: 466 AGKVRESSDKAFGFNAQTEEYGDMFK 491
>pdb|1KP8|A Chain A, Structural Basis For Groel-Assisted Protein Folding From The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A Resolution Length = 547 Back     alignment and structure
>pdb|3C9V|A Chain A, C7 Symmetrized Structure Of Unliganded Groel At 4.7 Angstrom Resolution From Cryoem Length = 526 Back     alignment and structure
>pdb|1PCQ|A Chain A, Crystal Structure Of Groel-Groes Length = 524 Back     alignment and structure
>pdb|2YEY|A Chain A, Crystal Structure Of The Allosteric-Defective Chaperonin Groel E434k Mutant Length = 524 Back     alignment and structure
>pdb|1SX3|A Chain A, Groel14-(Atpgammas)14 Length = 525 Back     alignment and structure
>pdb|1SS8|A Chain A, Groel Length = 524 Back     alignment and structure
>pdb|1GR5|A Chain A, Solution Structure Of Apo Groel By Cryo-Electron Microscopy Length = 547 Back     alignment and structure
>pdb|1AON|A Chain A, Crystal Structure Of The Asymmetric Chaperonin Complex GroelGROES(ADP)7 Length = 547 Back     alignment and structure
>pdb|1WE3|A Chain A, Crystal Structure Of The Chaperonin Complex Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS Length = 543 Back     alignment and structure
>pdb|2EU1|A Chain A, Crystal Structure Of The Chaperonin Groel-E461k Length = 548 Back     alignment and structure
>pdb|1J4Z|A Chain A, Structural And Mechanistic Basis For Allostery In The Bacterial Chaperonin Groel; See Remark 400 Length = 547 Back     alignment and structure
>pdb|1GRL|A Chain A, The Crystal Structure Of The Bacterial Chaperonin Groel At 2.8 Angstroms Length = 548 Back     alignment and structure
>pdb|3CAU|A Chain A, D7 Symmetrized Structure Of Unliganded Groel At 4.2 Angstrom Resolution By Cryoem Length = 526 Back     alignment and structure
>pdb|1OEL|A Chain A, Conformational Variability In The Refined Structure Of The Chaperonin Groel At 2.8 Angstrom Resolution Length = 547 Back     alignment and structure
>pdb|4AAQ|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel Length = 548 Back     alignment and structure
>pdb|1SJP|A Chain A, Mycobacterium Tuberculosis Chaperonin60.2 Length = 504 Back     alignment and structure
>pdb|3RTK|A Chain A, Crystal Structure Of Cpn60.2 From Mycobacterium Tuberculosis At 2.8a Length = 546 Back     alignment and structure
>pdb|1LA1|A Chain A, Gro-El Fragment (Apical Domain) Comprising Residues 188-379 Length = 192 Back     alignment and structure
>pdb|1FYA|A Chain A, Crystal Structure Of The Hexa-Substituted Mutant Of The Molecular Chaperonin Groel Apical Domain Length = 193 Back     alignment and structure
>pdb|1FY9|A Chain A, Crystal Structure Of The Hexa-Substituted Mutant Of The Molecular Chaperonin Groel Apical Domain Length = 193 Back     alignment and structure
>pdb|1KID|A Chain A, Groel (Hsp60 Class) Fragment (Apical Domain) Comprising Residues 191-376, Mutant With Ala 262 Replaced With Leu And Ile 267 Replaced With Met Length = 203 Back     alignment and structure
>pdb|3OSX|A Chain A, Crystal Structure Of Apical Domain Of Insecticidal Groel From Xenorhapdus Nematophila Length = 201 Back     alignment and structure
>pdb|3M6C|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Groel1 Apical Domain Length = 194 Back     alignment and structure
>pdb|1JON|A Chain A, Groel (Hsp60 Class) Fragment Comprising Residues 191-345 Length = 155 Back     alignment and structure
>pdb|1DK7|A Chain A, Crystal Structure Of An Isolated Apical Domain Of Groel Length = 146 Back     alignment and structure
>pdb|1SRV|A Chain A, Thermus Thermophilus Groel (Hsp60 Class) Fragment (Apical Domain) Comprising Residues 192-336 Length = 145 Back     alignment and structure
>pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form Of Single Mutant) Length = 548 Back     alignment and structure
>pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form) Length = 548 Back     alignment and structure
>pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Formiii Crystal Complexed With Adp) Length = 548 Back     alignment and structure
>pdb|3P9D|E Chain E, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 562 Back     alignment and structure
>pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From Methanococcoides Burtonii Length = 500 Back     alignment and structure
>pdb|1A6D|B Chain B, Thermosome From T. Acidophilum Length = 543 Back     alignment and structure
>pdb|1A6D|A Chain A, Thermosome From T. Acidophilum Length = 545 Back     alignment and structure
>pdb|3IYG|E Chain E, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 Back     alignment and structure
>pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus Tengchongensis Strain S5 Length = 553 Back     alignment and structure
>pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp Length = 491 Back     alignment and structure
>pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp Length = 513 Back     alignment and structure
>pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State Length = 543 Back     alignment and structure
>pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp Length = 513 Back     alignment and structure
>pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State Length = 521 Back     alignment and structure
>pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp Length = 491 Back     alignment and structure
>pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State Length = 491 Back     alignment and structure
>pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From Methanococcus Maripaludis Length = 543 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query788
1kp8_A547 Groel protein; chaperonin, assisted protein foldin 1e-148
1kp8_A547 Groel protein; chaperonin, assisted protein foldin 3e-77
1kp8_A547 Groel protein; chaperonin, assisted protein foldin 3e-13
1iok_A545 Chaperonin 60; chaperone; 3.20A {Paracoccus denitr 1e-147
1iok_A545 Chaperonin 60; chaperone; 3.20A {Paracoccus denitr 2e-77
1iok_A545 Chaperonin 60; chaperone; 3.20A {Paracoccus denitr 2e-13
3rtk_A546 60 kDa chaperonin 2; heat shock protein, chaperone 1e-145
3rtk_A546 60 kDa chaperonin 2; heat shock protein, chaperone 6e-75
3rtk_A546 60 kDa chaperonin 2; heat shock protein, chaperone 2e-13
1we3_A543 CPN60(groel); chaperonin, chaperone, groel, HSP60, 1e-144
1we3_A543 CPN60(groel); chaperonin, chaperone, groel, HSP60, 3e-75
1we3_A543 CPN60(groel); chaperonin, chaperone, groel, HSP60, 3e-13
3osx_A201 60 kDa chaperonin; alpha, beta, apical domain, cha 8e-85
3osx_A201 60 kDa chaperonin; alpha, beta, apical domain, cha 2e-16
3osx_A201 60 kDa chaperonin; alpha, beta, apical domain, cha 3e-14
3osx_A201 60 kDa chaperonin; alpha, beta, apical domain, cha 4e-13
3m6c_A194 60 kDa chaperonin 1; chaperone, ATP-binding, nucle 3e-83
3m6c_A194 60 kDa chaperonin 1; chaperone, ATP-binding, nucle 2e-16
3m6c_A194 60 kDa chaperonin 1; chaperone, ATP-binding, nucle 3e-14
3m6c_A194 60 kDa chaperonin 1; chaperone, ATP-binding, nucle 4e-13
1srv_A145 Protein (groel (HSP60 class)); chaperone, cell div 9e-54
1srv_A145 Protein (groel (HSP60 class)); chaperone, cell div 2e-14
1srv_A145 Protein (groel (HSP60 class)); chaperone, cell div 2e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
1a6d_A545 Thermosome (alpha subunit); group II chaperonin, C 1e-11
3iyg_G515 T-complex protein 1 subunit gamma; TRIC/CCT, asymm 3e-11
1q3q_A548 Thermosome alpha subunit; chaperone, chaperonin; H 5e-11
3ko1_A553 Chaperonin; 9-fold symmetry, double ring, ATP hydr 7e-11
3iyg_H515 T-complex protein 1 subunit ETA; TRIC/CCT, asymmet 8e-11
3aq1_B500 Thermosome subunit; group II chaperonin, protein f 8e-11
3iyg_Z517 T-complex protein 1 subunit zeta; TRIC/CCT, asymme 1e-10
3ruv_A543 Chaperonin, CPN; double-ring, protein folding mach 1e-10
3p9d_G550 T-complex protein 1 subunit ETA; HSP60, eukaryotic 1e-10
1a6d_B543 Thermosome (beta subunit); group II chaperonin, CC 2e-10
3iyg_D518 T-complex protein 1 subunit delta; TRIC/CCT, asymm 2e-10
3p9d_C590 T-complex protein 1 subunit gamma; HSP60, eukaryot 2e-10
3p9d_D528 T-complex protein 1 subunit delta; HSP60, eukaryot 2e-10
3iyg_B513 T-complex protein 1 subunit beta; TRIC/CCT, asymme 3e-10
3p9d_E562 T-complex protein 1 subunit epsilon; HSP60, eukary 3e-10
3p9d_B527 T-complex protein 1 subunit beta; HSP60, eukaryoti 9e-10
3p9d_F546 T-complex protein 1 subunit zeta; HSP60, eukaryoti 1e-09
3p9d_H568 T-complex protein 1 subunit theta; HSP60, eukaryot 2e-09
3p9d_A559 T-complex protein 1 subunit alpha; HSP60, eukaryot 3e-09
3iyg_E515 T-complex protein 1 subunit; TRIC/CCT, asymmetric, 3e-09
3iyg_A529 T-complex protein 1 subunit alpha; TRIC/CCT, asymm 7e-09
3iyg_Q512 T-complex protein 1 subunit theta; TRIC/CCT, asymm 8e-09
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ... Length = 547 Back     alignment and structure
 Score =  443 bits (1143), Expect = e-148
 Identities = 177/372 (47%), Positives = 225/372 (60%), Gaps = 49/372 (13%)

Query: 412 KVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKI 471
           KVGKEGVITV+DG  L DEL+V+EGM+FDRGY+SPYFIN  +   VE +   +LL++ KI
Sbjct: 167 KVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI 226

Query: 472 SSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531
           S+I+ ++P LE      KPL+I+AEDV+GEAL+TLVVN ++  ++VAAVKAPGFGD RKA
Sbjct: 227 SNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKA 286

Query: 532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRA 591
            LQD+A  TGG V  +E   ++LE     DLG    +VI KD T I+ G G++  I  R 
Sbjct: 287 MLQDIATLTGGTVISEEIG-MELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRV 345

Query: 592 DQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAA 651
            QIR QIE  TSDY+REKLQER+A+LA GVAV+KVG ++EVE+ EKK RV DAL+ATRAA
Sbjct: 346 AQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAA 405

Query: 652 VEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREK 711
           VEEG+V GGG AL+R  + L  L   NADQ  G                           
Sbjct: 406 VEEGVVAGGGVALIRVASKLADLRGQNADQNVG--------------------------- 438

Query: 712 LQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGY 771
                                +++  +A+  P   I  N G + SVV N V    G  GY
Sbjct: 439 ---------------------IKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGY 477

Query: 772 DAMNNEYVNMIQ 783
           +A   EY NMI 
Sbjct: 478 NAATEEYGNMID 489
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ... Length = 547 Back     alignment and structure
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ... Length = 547 Back     alignment and structure
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 Length = 545 Back     alignment and structure
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 Length = 545 Back     alignment and structure
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 Length = 545 Back     alignment and structure
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A Length = 546 Back     alignment and structure
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A Length = 546 Back     alignment and structure
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A Length = 546 Back     alignment and structure
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a* Length = 543 Back     alignment and structure
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a* Length = 543 Back     alignment and structure
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a* Length = 543 Back     alignment and structure
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A Length = 201 Back     alignment and structure
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A Length = 201 Back     alignment and structure
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A Length = 201 Back     alignment and structure
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A Length = 201 Back     alignment and structure
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis} Length = 194 Back     alignment and structure
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis} Length = 194 Back     alignment and structure
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis} Length = 194 Back     alignment and structure
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis} Length = 194 Back     alignment and structure
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1 Length = 145 Back     alignment and structure
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1 Length = 145 Back     alignment and structure
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1 Length = 145 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Length = 545 Back     alignment and structure
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 Back     alignment and structure
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Length = 548 Back     alignment and structure
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Length = 553 Back     alignment and structure
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 Back     alignment and structure
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Length = 500 Back     alignment and structure
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 517 Back     alignment and structure
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Length = 543 Back     alignment and structure
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* Length = 550 Back     alignment and structure
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Length = 543 Back     alignment and structure
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 518 Back     alignment and structure
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 2bbm_B 2bbn_B Length = 590 Back     alignment and structure
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* Length = 528 Back     alignment and structure
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Length = 513 Back     alignment and structure
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* Length = 562 Back     alignment and structure
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* Length = 527 Back     alignment and structure
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* Length = 546 Back     alignment and structure
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* Length = 568 Back     alignment and structure
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* Length = 559 Back     alignment and structure
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 Back     alignment and structure
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 529 Back     alignment and structure
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 512 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query788
1kp8_A547 Groel protein; chaperonin, assisted protein foldin 100.0
3rtk_A546 60 kDa chaperonin 2; heat shock protein, chaperone 100.0
1iok_A545 Chaperonin 60; chaperone; 3.20A {Paracoccus denitr 100.0
1we3_A543 CPN60(groel); chaperonin, chaperone, groel, HSP60, 100.0
3p9d_C590 T-complex protein 1 subunit gamma; HSP60, eukaryot 100.0
3iyg_E515 T-complex protein 1 subunit; TRIC/CCT, asymmetric, 100.0
3p9d_A559 T-complex protein 1 subunit alpha; HSP60, eukaryot 100.0
3iyg_D518 T-complex protein 1 subunit delta; TRIC/CCT, asymm 100.0
3iyg_H515 T-complex protein 1 subunit ETA; TRIC/CCT, asymmet 100.0
1a6d_A545 Thermosome (alpha subunit); group II chaperonin, C 100.0
3ko1_A553 Chaperonin; 9-fold symmetry, double ring, ATP hydr 100.0
3ruv_A543 Chaperonin, CPN; double-ring, protein folding mach 100.0
3p9d_D528 T-complex protein 1 subunit delta; HSP60, eukaryot 100.0
1q3q_A548 Thermosome alpha subunit; chaperone, chaperonin; H 100.0
3iyg_B513 T-complex protein 1 subunit beta; TRIC/CCT, asymme 100.0
3iyg_Q512 T-complex protein 1 subunit theta; TRIC/CCT, asymm 100.0
1a6d_B543 Thermosome (beta subunit); group II chaperonin, CC 100.0
3p9d_B527 T-complex protein 1 subunit beta; HSP60, eukaryoti 100.0
3p9d_E562 T-complex protein 1 subunit epsilon; HSP60, eukary 100.0
3p9d_G550 T-complex protein 1 subunit ETA; HSP60, eukaryotic 100.0
3iyg_Z517 T-complex protein 1 subunit zeta; TRIC/CCT, asymme 100.0
3iyg_A529 T-complex protein 1 subunit alpha; TRIC/CCT, asymm 100.0
3p9d_F546 T-complex protein 1 subunit zeta; HSP60, eukaryoti 100.0
3aq1_B500 Thermosome subunit; group II chaperonin, protein f 100.0
3iyg_G515 T-complex protein 1 subunit gamma; TRIC/CCT, asymm 100.0
3p9d_H568 T-complex protein 1 subunit theta; HSP60, eukaryot 100.0
3m6c_A194 60 kDa chaperonin 1; chaperone, ATP-binding, nucle 100.0
3osx_A201 60 kDa chaperonin; alpha, beta, apical domain, cha 100.0
1srv_A145 Protein (groel (HSP60 class)); chaperone, cell div 100.0
3rtk_A 546 60 kDa chaperonin 2; heat shock protein, chaperone 99.96
1kp8_A 547 Groel protein; chaperonin, assisted protein foldin 99.95
1iok_A 545 Chaperonin 60; chaperone; 3.20A {Paracoccus denitr 99.95
1we3_A 543 CPN60(groel); chaperonin, chaperone, groel, HSP60, 99.94
3p9d_C590 T-complex protein 1 subunit gamma; HSP60, eukaryot 99.79
3p9d_B527 T-complex protein 1 subunit beta; HSP60, eukaryoti 99.77
1srv_A145 Protein (groel (HSP60 class)); chaperone, cell div 99.7
3osx_A201 60 kDa chaperonin; alpha, beta, apical domain, cha 99.67
3m6c_A194 60 kDa chaperonin 1; chaperone, ATP-binding, nucle 99.66
3iyg_Q512 T-complex protein 1 subunit theta; TRIC/CCT, asymm 99.63
3iyg_D518 T-complex protein 1 subunit delta; TRIC/CCT, asymm 99.62
3p9d_G550 T-complex protein 1 subunit ETA; HSP60, eukaryotic 99.54
3iyg_B513 T-complex protein 1 subunit beta; TRIC/CCT, asymme 99.51
3iyg_G515 T-complex protein 1 subunit gamma; TRIC/CCT, asymm 99.37
3iyg_H515 T-complex protein 1 subunit ETA; TRIC/CCT, asymmet 99.35
3p9d_E562 T-complex protein 1 subunit epsilon; HSP60, eukary 99.34
3p9d_D528 T-complex protein 1 subunit delta; HSP60, eukaryot 99.23
3p9d_A559 T-complex protein 1 subunit alpha; HSP60, eukaryot 99.21
3iyg_E515 T-complex protein 1 subunit; TRIC/CCT, asymmetric, 99.16
3ko1_A553 Chaperonin; 9-fold symmetry, double ring, ATP hydr 99.13
3ruv_A543 Chaperonin, CPN; double-ring, protein folding mach 99.11
1q3q_A548 Thermosome alpha subunit; chaperone, chaperonin; H 99.03
1a6d_A545 Thermosome (alpha subunit); group II chaperonin, C 99.02
1a6d_B543 Thermosome (beta subunit); group II chaperonin, CC 99.0
3iyg_A529 T-complex protein 1 subunit alpha; TRIC/CCT, asymm 99.0
3p9d_H568 T-complex protein 1 subunit theta; HSP60, eukaryot 98.93
3iyg_Z517 T-complex protein 1 subunit zeta; TRIC/CCT, asymme 98.93
3p9d_F546 T-complex protein 1 subunit zeta; HSP60, eukaryoti 98.9
1gml_A178 T-complex protein 1 subunit gamma; chaperone, chap 98.52
3aq1_B500 Thermosome subunit; group II chaperonin, protein f 98.38
1ass_A159 Thermosome; chaperonin, HSP60, TCP1, groel, thermo 98.31
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ... Back     alignment and structure
Probab=100.00  E-value=2e-103  Score=899.07  Aligned_cols=471  Identities=53%  Similarity=0.827  Sum_probs=451.7

Q ss_pred             EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622          6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA   85 (788)
Q Consensus         6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL   85 (788)
                      +++.++|+  |||+||||||++++|+|+|||||+||+|+|++++||||++|||++++|++||+++||||||+||||++|+
T Consensus        22 la~~vktt--LGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll   99 (547)
T 1kp8_A           22 LADAVKVT--LGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAII   99 (547)
T ss_dssp             HHHHHHTT--CSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred             HHHHHHhc--cCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHH
Confidence            34668889  9999999999999999999999999999999998888889999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622         86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV  165 (788)
Q Consensus        86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I  165 (788)
                      +++++++++|+||+.|++||++|++.+++.|+++++|+++.++|.+||++|++++++||+++++||.+            
T Consensus       100 ~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~------------  167 (547)
T 1kp8_A          100 TEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDK------------  167 (547)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHH------------
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHH------------
Confidence            99999999999999999999999999999999999999999999999999999999999999999987            


Q ss_pred             eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622        166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ  245 (788)
Q Consensus       166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~  245 (788)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (547)
T 1kp8_A          168 --------------------------------------------------------------------------------  167 (547)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622        246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV  325 (788)
Q Consensus       246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  325 (788)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (547)
T 1kp8_A          168 --------------------------------------------------------------------------------  167 (547)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622        326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT  405 (788)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (788)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (547)
T 1kp8_A          168 --------------------------------------------------------------------------------  167 (547)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622        406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN  485 (788)
Q Consensus       406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~  485 (788)
                             ||++|+|+|++|+++++++++++||.||+||+||||+|++++|..+++|||||++|.+|+++++++|+||.+.
T Consensus       168 -------V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~  240 (547)
T 1kp8_A          168 -------VGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVA  240 (547)
T ss_dssp             -------HCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHH
T ss_pred             -------hCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHH
Confidence                   5667889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622        486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV  565 (788)
Q Consensus       486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a  565 (788)
                      +.++||||++++|+++||++|+.|++||+++|+|||+|+||++|++.|+|||++|||++++++ .|.+++++++++||+|
T Consensus       241 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~-~g~~l~~~~~~~LG~a  319 (547)
T 1kp8_A          241 KAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEE-IGMELEKATLEDLGQA  319 (547)
T ss_dssp             GGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGG-GTCCSTTCCTTTSEEE
T ss_pred             hcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEeccc-ccCCcccCCHHHCCce
Confidence            999999999999999999999999999999999999999999999999999999999999998 8999999999999999


Q ss_pred             eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622        566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL  645 (788)
Q Consensus       566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl  645 (788)
                      ++|++++++|++++|.+++++++.|++|||.|++.++|+|||++|+||||||+|++++|.|||+|+.|++|++++++|||
T Consensus       320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl  399 (547)
T 1kp8_A          320 KRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL  399 (547)
T ss_dssp             EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred             eEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEE
Q psy14622        646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV  725 (788)
Q Consensus       646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvav  725 (788)
                      |++|+|+++|||||||+++++++..|+++...+.+++.|                                         
T Consensus       400 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~-----------------------------------------  438 (547)
T 1kp8_A          400 HATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVG-----------------------------------------  438 (547)
T ss_dssp             HHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHH-----------------------------------------
T ss_pred             HHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHH-----------------------------------------
Confidence            999999999999999999999999997654222233323                                         


Q ss_pred             EEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622        726 LKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL  786 (788)
Q Consensus       726 i~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi  786 (788)
                             +++..++++.|.+++|.|||+++..|+.++++.+..+|||+.+|+|+||+++||
T Consensus       439 -------i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~~~~~G~d~~~g~~~dm~~~gI  492 (547)
T 1kp8_A          439 -------IKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGI  492 (547)
T ss_dssp             -------HHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHSCTTEEEETTTTEEEETTTTTC
T ss_pred             -------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCEeEeCCCCccccchhcCc
Confidence                   899999999999999999999999999999987678999999999999999997
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A Back     alignment and structure
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 Back     alignment and structure
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a* Back     alignment and structure
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B Back     alignment and structure
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a* Back     alignment and structure
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Back     alignment and structure
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Back     alignment and structure
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Back     alignment and structure
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d* Back     alignment and structure
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Back     alignment and structure
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Back     alignment and structure
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Back     alignment and structure
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b* Back     alignment and structure
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e* Back     alignment and structure
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g* Back     alignment and structure
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f* Back     alignment and structure
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Back     alignment and structure
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h* Back     alignment and structure
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis} Back     alignment and structure
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A Back     alignment and structure
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1 Back     alignment and structure
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A Back     alignment and structure
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ... Back     alignment and structure
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 Back     alignment and structure
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a* Back     alignment and structure
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B Back     alignment and structure
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b* Back     alignment and structure
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1 Back     alignment and structure
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A Back     alignment and structure
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis} Back     alignment and structure
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g* Back     alignment and structure
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Back     alignment and structure
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e* Back     alignment and structure
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d* Back     alignment and structure
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a* Back     alignment and structure
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Back     alignment and structure
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Back     alignment and structure
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Back     alignment and structure
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Back     alignment and structure
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Back     alignment and structure
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h* Back     alignment and structure
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Back     alignment and structure
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f* Back     alignment and structure
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A Back     alignment and structure
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Back     alignment and structure
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 788
d1kida_193 c.8.5.1 (A:) GroEL, A domain {Escherichia coli [Ta 5e-76
d1kida_193 c.8.5.1 (A:) GroEL, A domain {Escherichia coli [Ta 1e-14
d1kida_193 c.8.5.1 (A:) GroEL, A domain {Escherichia coli [Ta 3e-14
d1kida_193 c.8.5.1 (A:) GroEL, A domain {Escherichia coli [Ta 1e-13
d1ioka2176 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus de 1e-73
d1ioka2176 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus de 2e-15
d1ioka2176 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus de 1e-14
d1ioka2176 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus de 1e-07
d1sjpa2184 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium 4e-72
d1sjpa2184 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium 8e-15
d1sjpa2184 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium 2e-14
d1sjpa2184 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium 4e-12
d1srva_145 c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus 1e-56
d1srva_145 c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus 4e-18
d1srva_145 c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus 1e-17
d1ioka1252 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Par 2e-23
d1ioka1252 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Par 1e-16
d1ioka1252 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Par 9e-10
d1sjpa1180 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {My 1e-21
d1sjpa1180 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {My 5e-06
d1kp8a1252 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Esc 5e-21
d1kp8a1252 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Esc 2e-15
d1kp8a1252 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Esc 4e-12
d1a6db1243 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domai 4e-20
d1a6db1243 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domai 0.003
d1q3qa1258 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain 3e-18
d1q3qa1258 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain 1e-05
d1a6da1245 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domai 4e-18
d1a6da1245 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domai 5e-05
d1we3a1255 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {The 3e-17
d1we3a1255 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {The 4e-11
d1we3a1255 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {The 5e-05
d1sjpa389 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {My 3e-12
d1sjpa389 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {My 1e-10
d1sjpa389 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {My 1e-06
d1sjpa389 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {My 4e-05
d1ioka397 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Pa 5e-11
d1ioka397 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Pa 3e-10
d1kp8a397 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Es 6e-10
d1kp8a397 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Es 1e-09
d1kp8a397 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Es 2e-05
d1we3a386 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Th 8e-09
d1we3a386 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Th 6e-08
d1we3a386 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Th 2e-06
d1we3a386 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Th 6e-05
d1we3a386 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Th 0.002
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} Length = 193 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: GroEL apical domain-like
family: GroEL-like chaperone, apical domain
domain: GroEL, A domain
species: Escherichia coli [TaxId: 562]

 Score =  242 bits (619), Expect = 5e-76
 Identities = 102/192 (53%), Positives = 132/192 (68%), Gaps = 1/192 (0%)

Query: 430 ELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRK 489
                EGM+FDRGY+SPYFIN  +   VE +   +LL++ KIS+I+ ++P LE      K
Sbjct: 3   VPRGSEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGK 62

Query: 490 PLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEA 549
           PL+I+AEDV+GEAL+TLVVN ++  ++VAAVKAPGFGD RKA LQD+A  TGG V  +E 
Sbjct: 63  PLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEI 122

Query: 550 SPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREK 609
             ++LE     DLG    +VI KD T I+ G G++  I  R  QIR QIE  TSDY+REK
Sbjct: 123 G-MELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREK 181

Query: 610 LQERLARLASGV 621
           LQER+A+LA GV
Sbjct: 182 LQERVAKLAGGV 193
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} Length = 193 Back     information, alignment and structure
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} Length = 193 Back     information, alignment and structure
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} Length = 193 Back     information, alignment and structure
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} Length = 176 Back     information, alignment and structure
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} Length = 176 Back     information, alignment and structure
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} Length = 176 Back     information, alignment and structure
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} Length = 176 Back     information, alignment and structure
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 184 Back     information, alignment and structure
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 184 Back     information, alignment and structure
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 184 Back     information, alignment and structure
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 184 Back     information, alignment and structure
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} Length = 145 Back     information, alignment and structure
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} Length = 145 Back     information, alignment and structure
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} Length = 145 Back     information, alignment and structure
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]} Length = 252 Back     information, alignment and structure
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]} Length = 252 Back     information, alignment and structure
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]} Length = 252 Back     information, alignment and structure
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 180 Back     information, alignment and structure
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 180 Back     information, alignment and structure
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]} Length = 252 Back     information, alignment and structure
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]} Length = 252 Back     information, alignment and structure
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]} Length = 252 Back     information, alignment and structure
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 243 Back     information, alignment and structure
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 243 Back     information, alignment and structure
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 258 Back     information, alignment and structure
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 258 Back     information, alignment and structure
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 245 Back     information, alignment and structure
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 245 Back     information, alignment and structure
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]} Length = 255 Back     information, alignment and structure
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]} Length = 255 Back     information, alignment and structure
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]} Length = 255 Back     information, alignment and structure
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 89 Back     information, alignment and structure
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 89 Back     information, alignment and structure
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 89 Back     information, alignment and structure
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Length = 89 Back     information, alignment and structure
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]} Length = 97 Back     information, alignment and structure
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]} Length = 97 Back     information, alignment and structure
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]} Length = 97 Back     information, alignment and structure
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]} Length = 97 Back     information, alignment and structure
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]} Length = 97 Back     information, alignment and structure
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]} Length = 86 Back     information, alignment and structure
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]} Length = 86 Back     information, alignment and structure
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]} Length = 86 Back     information, alignment and structure
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]} Length = 86 Back     information, alignment and structure
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]} Length = 86 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query788
d1kida_193 GroEL, A domain {Escherichia coli [TaxId: 562]} 100.0
d1sjpa2184 GroEL, A domain {Mycobacterium tuberculosis, GroEL 100.0
d1ioka2176 GroEL, A domain {Paracoccus denitrificans [TaxId: 100.0
d1srva_145 GroEL, A domain {Thermus thermophilus [TaxId: 274] 100.0
d1kp8a1252 GroEL, E domain {Escherichia coli [TaxId: 562]} 99.97
d1q3qa1258 Thermosome, E domain {Archaeon Thermococcus sp. ks 99.97
d1ioka1252 GroEL, E domain {Paracoccus denitrificans [TaxId: 99.96
d1we3a1255 GroEL, E domain {Thermus thermophilus [TaxId: 274] 99.95
d1a6db1243 Thermosome, E domain {Archaeon Thermoplasma acidop 99.91
d1a6da1245 Thermosome, E domain {Archaeon Thermoplasma acidop 99.9
d1sjpa389 GroEL, I domain {Mycobacterium tuberculosis, GroEL 99.83
d1ioka1252 GroEL, E domain {Paracoccus denitrificans [TaxId: 99.8
d1kp8a1252 GroEL, E domain {Escherichia coli [TaxId: 562]} 99.71
d1ioka397 GroEL, I domain {Paracoccus denitrificans [TaxId: 99.71
d1kp8a397 GroEL, I domain {Escherichia coli [TaxId: 562]} 99.7
d1we3a386 GroEL, I domain {Thermus thermophilus [TaxId: 274] 99.68
d1srva_145 GroEL, A domain {Thermus thermophilus [TaxId: 274] 99.6
d1sjpa1180 GroEL, E domain {Mycobacterium tuberculosis, GroEL 99.6
d1kida_193 GroEL, A domain {Escherichia coli [TaxId: 562]} 99.52
d1sjpa2184 GroEL, A domain {Mycobacterium tuberculosis, GroEL 99.51
d1ioka2176 GroEL, A domain {Paracoccus denitrificans [TaxId: 99.5
d1we3a1255 GroEL, E domain {Thermus thermophilus [TaxId: 274] 99.48
d1a6db1243 Thermosome, E domain {Archaeon Thermoplasma acidop 99.3
d1q3qa1258 Thermosome, E domain {Archaeon Thermococcus sp. ks 99.29
d1a6da1245 Thermosome, E domain {Archaeon Thermoplasma acidop 99.29
d1sjpa1180 GroEL, E domain {Mycobacterium tuberculosis, GroEL 99.1
d1sjpa389 GroEL, I domain {Mycobacterium tuberculosis, GroEL 99.06
d1kp8a397 GroEL, I domain {Escherichia coli [TaxId: 562]} 98.79
d1we3a386 GroEL, I domain {Thermus thermophilus [TaxId: 274] 98.65
d1ioka397 GroEL, I domain {Paracoccus denitrificans [TaxId: 98.5
d1q3qa2153 Thermosome, A-domain {Archaeon Thermococcus sp. ks 98.43
d1a6db2152 Thermosome, A-domain {Archaeon Thermoplasma acidop 98.41
d1assa_152 Thermosome, A-domain {Archaeon Thermoplasma acidop 98.33
d1gmla_168 Thermosome, A-domain {Mouse (Mus musculus), gamma 98.1
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: GroEL apical domain-like
family: GroEL-like chaperone, apical domain
domain: GroEL, A domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.1e-58  Score=460.11  Aligned_cols=190  Identities=54%  Similarity=0.836  Sum_probs=187.1

Q ss_pred             EEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhh
Q psy14622        431 LEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNR  510 (788)
Q Consensus       431 lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~  510 (788)
                      ++++|||+||+||+||||+||+++|+++|+|||||+||+||+++++|+|+||++.+.++||||||+||+++||++|++|+
T Consensus         4 ~~~tEG~~~d~Gy~SpyFvtd~~~~~~~l~~p~ILitd~kI~~~~~i~p~Le~~~~~~~pLlIIA~di~~~aL~~Lv~N~   83 (193)
T d1kida_           4 PRGSEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNT   83 (193)
T ss_dssp             CSCCCCEEESCCCSCGGGCCBTTTTBEEEESCEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred             ccccCCeeecCCcCCccceeCCCCCEEEecCcEEEEEcCCcccHHHHHHHHHHHHhhCCcEEEEeccccHHHHHHHHHhh
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHH
Q psy14622        511 LKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRR  590 (788)
Q Consensus       511 ~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R  590 (788)
                      ++|+++|||||+|+||++|+++|+|||++|||+||+++ .|..++++++++||+|++|++|+++|+|++|.|+++.|+.|
T Consensus        84 ~kg~l~v~aVkaPgfG~~r~~~LeDlA~~TGa~vi~~~-~g~~l~~~~~~~LG~~~kv~itk~~T~ii~g~g~~~~I~~R  162 (193)
T d1kida_          84 MRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEE-IGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGR  162 (193)
T ss_dssp             HTTSCCEEEEECCSCHHHHHHHHHHHHHHHTCCCBCGG-GTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHH
T ss_pred             hccCcceeeccCCCcChhHHHHHHHHHHHcCCEEechh-cccccccCCHhHcCcccEEEEecCceEEEcCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999 89999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhcCCe
Q psy14622        591 ADQIRDQIEATTSDYEREKLQERLARLASGV  621 (788)
Q Consensus       591 ~~~l~~~~~~~~s~~~~~~L~eRla~Lsggv  621 (788)
                      +++|+.+++.++++|+|++|++|||||+|||
T Consensus       163 i~~Lk~~l~~~~~~~~~e~L~eRlakLsGGV  193 (193)
T d1kida_         163 VAQIRQQIEEATSDYDREKLQERVAKLAGGV  193 (193)
T ss_dssp             HHHHHHHHHHCCSHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999986
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Back     information, alignment and structure
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Back     information, alignment and structure
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Back     information, alignment and structure
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Back     information, alignment and structure
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Back     information, alignment and structure
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Back     information, alignment and structure
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Back     information, alignment and structure
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Back     information, alignment and structure
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Back     information, alignment and structure
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Back     information, alignment and structure
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Back     information, alignment and structure
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} Back     information, alignment and structure
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Back     information, alignment and structure
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Back     information, alignment and structure
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Back     information, alignment and structure
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} Back     information, alignment and structure