Psyllid ID: psy14681

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
MHGKIALEERLEASDQFSRRNCLLFRGIPEADPDKRETEEDCQALVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFLK
ccHHHHHHHHHcHHHHHHHHHcEEEcccccccccccccHHHHHHHHHHcHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHcHHHHHHHHHHcccccccc
cccHEHHHHHHcHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcc
MHGKIALEERLEASDQFSRRNcllfrgipeadpdkretEEDCQALVMAFAVNLfrtlppssnpngaefdpeedeptleaaWPHLQLVYEFFLRflespdfqpniakkYIDQKFVLQLLdlfdsedprerDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLfdefafplpsqvMFLNELEEILdviepaefqkVMVPLFHQIAKcvssshfqTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIingfalplkdeHKFFLLKVLLRIFAVNLfrtlppssnpngaefdpeedeptleaaWPHLQLVYEFFLRYVAERALYYWNNEYFMNLItdnatvivpimfpalyrnSKTHWNKFLK
mhgkialeerleasdqfsrrncllfrgipeadpdkrETEEDCQALVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFLK
MHGKIALEERLEASDQFSRRNCLLFRGIPEADPDKRETEEDCQALVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFLK
********************NCLLFRGI*************CQALVMAFAVNLFRT*********************EAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTL********************EAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWN****
***********************LFRGIPE*****RETEEDCQALVMAFAVNLFRTLPPSSN****EFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKF**
MHGKIALEERLEASDQFSRRNCLLFRGIPEAD********DCQALVMAFAVNLFRTLPPSSN*************TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTLPPSSN*************TLEAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFLK
****IALEERLEASDQFSRRNCLLFRGIPEADPDKRETEEDCQALVMAFAVNLFRTLPPS*****AEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWN****
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MHGKIALEERLEASDQFSRRNCLLFRGIPEADPDKRETEEDCQALVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFLK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query394 2.2.26 [Sep-21-2011]
Q60996524 Serine/threonine-protein no N/A 0.489 0.368 0.608 9e-75
Q28651524 Serine/threonine-protein yes N/A 0.492 0.370 0.606 9e-75
Q13362524 Serine/threonine-protein no N/A 0.492 0.370 0.606 1e-74
Q28653586 Serine/threonine-protein no N/A 0.489 0.329 0.596 1e-73
Q14738602 Serine/threonine-protein no N/A 0.489 0.320 0.596 1e-73
Q61151467 Serine/threonine-protein no N/A 0.730 0.616 0.441 2e-64
Q16537467 Serine/threonine-protein no N/A 0.730 0.616 0.441 2e-64
A4FV68467 Serine/threonine-protein no N/A 0.730 0.616 0.441 2e-64
Q15173497 Serine/threonine-protein no N/A 0.484 0.384 0.503 1e-59
Q6PD03486 Serine/threonine-protein no N/A 0.484 0.393 0.5 3e-58
>sp|Q60996|2A5G_MOUSE Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform OS=Mus musculus GN=Ppp2r5c PE=1 SV=2 Back     alignment and function desciption
 Score =  280 bits (717), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 154/253 (60%), Positives = 165/253 (65%), Gaps = 60/253 (23%)

Query: 46  VMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIA 105
           V  FAVN+FRTLPPSSNP GAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIA
Sbjct: 96  VHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIA 155

Query: 106 KKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIH-- 163
           KKYIDQKFVLQLL+LFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYR I+  
Sbjct: 156 KKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYET 215

Query: 164 -------------GLIYNALKL------------------------------------FM 174
                        G I N   L                                    F+
Sbjct: 216 EHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFL 275

Query: 175 EMNQKLFDEFAFPL---------PSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCV 225
           E +  L +     L         P +VMFLNELEEILDVIEP+EF K+M PLF Q+AKCV
Sbjct: 276 EKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCV 335

Query: 226 SSSHFQTTLHRIY 238
           SS HFQ     +Y
Sbjct: 336 SSPHFQVAERALY 348
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. The PP2A-PPP2R5C holoenzyme may activate TP53 and play a role in DNA damage-induced inhibition of cell proliferation. PP2A-PPP2R5C may also regulate the ERK signaling pathway through ERK dephosphorylation.
Mus musculus (taxid: 10090)
>sp|Q28651|2A5G_RABIT Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform OS=Oryctolagus cuniculus GN=PPP2R5C PE=2 SV=1 Back     alignment and function description
>sp|Q13362|2A5G_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform OS=Homo sapiens GN=PPP2R5C PE=1 SV=3 Back     alignment and function description
>sp|Q28653|2A5D_RABIT Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Oryctolagus cuniculus GN=PPP2R5D PE=2 SV=1 Back     alignment and function description
>sp|Q14738|2A5D_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Homo sapiens GN=PPP2R5D PE=1 SV=1 Back     alignment and function description
>sp|Q61151|2A5E_MOUSE Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Mus musculus GN=Ppp2r5e PE=2 SV=3 Back     alignment and function description
>sp|Q16537|2A5E_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Homo sapiens GN=PPP2R5E PE=1 SV=1 Back     alignment and function description
>sp|A4FV68|2A5E_BOVIN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Bos taurus GN=PPP2R5E PE=1 SV=1 Back     alignment and function description
>sp|Q15173|2A5B_HUMAN Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform OS=Homo sapiens GN=PPP2R5B PE=1 SV=1 Back     alignment and function description
>sp|Q6PD03|2A5A_MOUSE Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform OS=Mus musculus GN=Ppp2r5a PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
195497534 832 GE25516 [Drosophila yakuba] gi|194182242 0.860 0.407 0.494 2e-89
72009224 579 PREDICTED: serine/threonine-protein phos 0.728 0.495 0.491 1e-74
72009226 543 PREDICTED: serine/threonine-protein phos 0.728 0.528 0.491 1e-74
194900292 701 GG22681 [Drosophila erecta] gi|190651394 0.718 0.403 0.5 2e-74
390179543 959 GA30019, isoform B [Drosophila pseudoobs 0.710 0.291 0.495 2e-74
270009544 634 hypothetical protein TcasGA2_TC008818 [T 0.728 0.452 0.488 2e-74
390362873 526 PREDICTED: serine/threonine-protein phos 0.728 0.545 0.491 2e-74
195157838 761 GL12593 [Drosophila persimilis] gi|19411 0.718 0.371 0.488 2e-74
189239515 583 PREDICTED: similar to delta isoform of r 0.728 0.492 0.488 3e-74
62089308 503 delta isoform of regulatory subunit B56, 0.489 0.383 0.638 3e-74
>gi|195497534|ref|XP_002096141.1| GE25516 [Drosophila yakuba] gi|194182242|gb|EDW95853.1| GE25516 [Drosophila yakuba] Back     alignment and taxonomy information
 Score =  336 bits (861), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 210/425 (49%), Positives = 243/425 (57%), Gaps = 86/425 (20%)

Query: 49  FAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKY 108
           FAVNLFRTLPPSSNPNGAEFDPEEDEPTLE++WPHLQLVYE FLRFLESPDFQPNIAK++
Sbjct: 254 FAVNLFRTLPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLRFLESPDFQPNIAKRF 313

Query: 109 IDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIH----- 163
           ID +FVLQLLDLFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINN+FYR I+     
Sbjct: 314 IDHQFVLQLLDLFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNVFYRFIYETEHH 373

Query: 164 ----------GLIYNALKL------------------------------------FMEMN 177
                     G I N   L                                    F+E +
Sbjct: 374 NGIAELLEILGSIINGFALPLKEEHKQFLLKVLLPLHKAKSLSVYHPQLTYCVVQFLEKD 433

Query: 178 QKLFDEFAFPL---------PSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSS 228
             L +     L         P +VMFLNELEE+LDVIEPAEFQKVMVPLF QIAKCVSS 
Sbjct: 434 PSLSEAVIKSLLKFWPKTHSPKEVMFLNELEELLDVIEPAEFQKVMVPLFRQIAKCVSSP 493

Query: 229 HFQTTLHRIY----GKFLGLRAYIRKQINNIFYRFIYETE--HHNGIAELLEILGSIING 282
           HFQ     +Y       + L A     I  I +  +      H N       I G I N 
Sbjct: 494 HFQVAERALYYWNNEYIMSLIADNSAMILPIMFPALNRNSKTHWNKT-----IHGLIYNA 548

Query: 283 FALPLKDEHKFF--LLKVLLRIFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWP-HLQ 339
             L ++ + + F    K   +   ++L +  P + +P    F  E +E  L+   P   Q
Sbjct: 549 LKLFMEMDQRLFDECSKNYKQEKQISLLKFWPKTHSPKEVMFLNELEE-LLDVIEPAEFQ 607

Query: 340 LVYEFFLRY-----------VAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTH 388
            V     R            VAERALYYWNNEY M+LI DN+ VI+PIMFPAL RNSKTH
Sbjct: 608 KVMVPLFRQIAKCVSSPHFQVAERALYYWNNEYIMSLIADNSAVILPIMFPALNRNSKTH 667

Query: 389 WNKFL 393
           WNK +
Sbjct: 668 WNKTI 672

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|72009224|ref|XP_780420.1| PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform-like isoform 1 [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|72009226|ref|XP_802025.1| PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform-like isoform 4 [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|194900292|ref|XP_001979691.1| GG22681 [Drosophila erecta] gi|190651394|gb|EDV48649.1| GG22681 [Drosophila erecta] Back     alignment and taxonomy information
>gi|390179543|ref|XP_002138064.2| GA30019, isoform B [Drosophila pseudoobscura pseudoobscura] gi|388859892|gb|EDY68622.2| GA30019, isoform B [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|270009544|gb|EFA05992.1| hypothetical protein TcasGA2_TC008818 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|390362873|ref|XP_003730246.1| PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform-like [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|195157838|ref|XP_002019801.1| GL12593 [Drosophila persimilis] gi|194116392|gb|EDW38435.1| GL12593 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|189239515|ref|XP_975554.2| PREDICTED: similar to delta isoform of regulatory subunit B56, protein phosphatase 2A [Tribolium castaneum] Back     alignment and taxonomy information
>gi|62089308|dbj|BAD93098.1| delta isoform of regulatory subunit B56, protein phosphatase 2A isoform 1 variant [Homo sapiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
UNIPROTKB|E2QTH9435 PPP2R5E "Uncharacterized prote 0.383 0.347 0.658 3.6e-82
UNIPROTKB|F5GWP3555 PPP2R5C "Serine/threonine-prot 0.461 0.327 0.673 7.4e-80
UNIPROTKB|H0YJ75553 PPP2R5C "Serine/threonine-prot 0.461 0.329 0.673 7.4e-80
UNIPROTKB|E2RCI9485 PPP2R5C "Uncharacterized prote 0.461 0.375 0.673 7.4e-80
UNIPROTKB|F1P708533 PPP2R5C "Uncharacterized prote 0.461 0.341 0.673 7.4e-80
UNIPROTKB|Q13362524 PPP2R5C "Serine/threonine-prot 0.461 0.347 0.673 7.4e-80
UNIPROTKB|Q28651524 PPP2R5C "Serine/threonine-prot 0.461 0.347 0.673 7.4e-80
UNIPROTKB|Q5F3C6524 PPP2R5C "Uncharacterized prote 0.461 0.347 0.673 7.4e-80
ZFIN|ZDB-GENE-041014-4578 ppp2r5cb "protein phosphatase 0.461 0.314 0.673 7.4e-80
UNIPROTKB|Q96B13384 PPP2R5C "Serine/threonine-prot 0.461 0.473 0.673 7.4e-80
UNIPROTKB|E2QTH9 PPP2R5E "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
 Score = 517 (187.1 bits), Expect = 3.6e-82, Sum P(3) = 3.6e-82
 Identities = 102/155 (65%), Positives = 124/155 (80%)

Query:    38 TEEDCQALVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLES 97
             TE+    +V   + N+FRTLPPS + N  EFDPEEDEPTLEA+WPHLQLVYEFF+RFLES
Sbjct:   108 TEQTYPEVVRMVSCNIFRTLPPSDS-N--EFDPEEDEPTLEASWPHLQLVYEFFIRFLES 164

Query:    98 PDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNI 157
              +FQP+IAKKYIDQKFVLQLL+LFDSEDPRERD+LKT LHRIYGKFLGLRA+IRKQINNI
Sbjct:   165 QEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNI 224

Query:   158 FYRTIHGLI-YNALKLFMEMNQKLFDEFAFPLPSQ 191
             F R ++    +N +   +E+   + + FA PL ++
Sbjct:   225 FLRFVYETEHFNGVAELLEILGSIINGFALPLKAE 259
GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA
GO:0007165 "signal transduction" evidence=IEA
GO:0000159 "protein phosphatase type 2A complex" evidence=IEA
UNIPROTKB|F5GWP3 PPP2R5C "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H0YJ75 PPP2R5C "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RCI9 PPP2R5C "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1P708 PPP2R5C "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q13362 PPP2R5C "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q28651 PPP2R5C "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform" [Oryctolagus cuniculus (taxid:9986)] Back     alignment and assigned GO terms
UNIPROTKB|Q5F3C6 PPP2R5C "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041014-4 ppp2r5cb "protein phosphatase 2, regulatory subunit B', gamma b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q96B13 PPP2R5C "Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q286512A5G_RABITNo assigned EC number0.60620.49230.3702yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
pfam01603405 pfam01603, B56, Protein phosphatase 2A regulatory 5e-63
pfam01603405 pfam01603, B56, Protein phosphatase 2A regulatory 2e-29
PLN00122170 PLN00122, PLN00122, serine/threonine protein phosp 8e-19
pfam01603405 pfam01603, B56, Protein phosphatase 2A regulatory 5e-16
pfam01603 405 pfam01603, B56, Protein phosphatase 2A regulatory 3e-14
>gnl|CDD|216599 pfam01603, B56, Protein phosphatase 2A regulatory B subunit (B56 family) Back     alignment and domain information 
 Score =  207 bits (528), Expect = 5e-63
 Identities = 107/275 (38%), Positives = 139/275 (50%), Gaps = 67/275 (24%)

Query: 19  RRNCL--LFRGIPEADPDKRETEEDCQALVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPT 76
           +R  L  +   +  +D   + TE+    +    AVN+FR LPP  NP+    DP++DEP 
Sbjct: 39  KRQTLKEIVDYVSNSDIVGKLTEDLYDEIFKMIAVNIFRPLPPIPNPS---LDPDDDEPF 95

Query: 77  LEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTL 136
           LE +WPHL LVYE  LRF+ESP F P   KKYID  F+ +LLDLFDS DPRERD LKT L
Sbjct: 96  LEPSWPHLSLVYEILLRFIESPPFDPL--KKYIDHSFIKRLLDLFDSPDPRERDQLKTFL 153

Query: 137 HRIYGKFLGLRAYIRKQ------------------------------------------- 153
           HRIYGKF GLR +IRK                                            
Sbjct: 154 HRIYGKFPGLRPFIRKAINSILYRFIYETEKPNGVAELLEILGSIINGFALPLKEEHKDF 213

Query: 154 --------INNIFYRTIHGLIYNALKLFMEMNQKLFDEFA------FPL---PSQVMFLN 196
                     +      H  +   +  F+E +  L +E        +P+     +V+FL+
Sbjct: 214 LLKVLLPLHKSKHLSLYHQQLSYCVVQFIEKDPSLAEEVIRGLLKHWPVTNSSKEVLFLD 273

Query: 197 ELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQ 231
           ELEEIL+ I P EFQK+MVPLF  +A+C+SS HFQ
Sbjct: 274 ELEEILEKIPPEEFQKIMVPLFKILARCISSPHFQ 308

Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism. The ability of this widely distributed heterotrimeric enzyme to act on a diverse array of substrates is largely controlled by the nature of its regulatory B subunit. There are multiple families of B subunits (See also pfam01240), this family is called the B56 family. Length = 405
>gnl|CDD|216599 pfam01603, B56, Protein phosphatase 2A regulatory B subunit (B56 family) Back     alignment and domain information
>gnl|CDD|215064 PLN00122, PLN00122, serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>gnl|CDD|216599 pfam01603, B56, Protein phosphatase 2A regulatory B subunit (B56 family) Back     alignment and domain information
>gnl|CDD|216599 pfam01603, B56, Protein phosphatase 2A regulatory B subunit (B56 family) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 394
KOG2085|consensus457 100.0
PF01603409 B56: Protein phosphatase 2A regulatory B subunit ( 100.0
KOG2085|consensus457 99.96
PF01603409 B56: Protein phosphatase 2A regulatory B subunit ( 99.79
PLN00122170 serine/threonine protein phosphatase 2A; Provision 99.64
PLN00122170 serine/threonine protein phosphatase 2A; Provision 95.04
>KOG2085|consensus Back     alignment and domain information 
Probab=100.00  E-value=9.2e-103  Score=780.88  Aligned_cols=282  Identities=63%  Similarity=1.029  Sum_probs=273.7

Q ss_pred             CCCCChHHHHHHHHHHHHhCCccccCCCCCCcC------ccc----------------chHhHHHHHHHHHhhhcCCCCC
Q psy14681          2 HGKIALEERLEASDQFSRRNCLLFRGIPEADPD------KRE----------------TEEDCQALVMAFAVNLFRTLPP   59 (394)
Q Consensus         2 ~~~~~~~e~~~Lf~~Kl~~C~~ifDF~~~~~~d------Kr~----------------te~~~~~ii~Mis~NiFR~lPp   59 (394)
                      ++|||++|+++||++|++|||++|||+ ||.+|      ||+                |+++|+++++|+++||||++||
T Consensus        48 ~~dv~~se~~~Lf~~Kl~~Cc~~FDF~-Dp~~~~~~keikR~tL~eLvd~v~~~~~kite~~~~~vv~m~s~nifR~lpp  126 (457)
T KOG2085|consen   48 LKDVPSSEQKELFIKKLEQCCVLFDFN-DPLKDLKGKEIKRQTLLELVDDVISRRGKISEEVYSEVVKMFSVNIFRTLPP  126 (457)
T ss_pred             cCcCChhHhHHHHHHHHHhhheeeecc-ChhhhhccchhHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhhccCCc
Confidence            689999999999999999999999996 89888      675                8999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcccccCCcchHHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Q psy14681         60 SSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRI  139 (394)
Q Consensus        60 ~~~~~~~~fdpeedEp~le~sWPHLqlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~  139 (394)
                      +.+++|  +|||||||++|++|||||+|||+|+||++||+||+++||+||||+||++||++|||||||||+++|++||||
T Consensus       127 ~~n~~~--~d~eedEp~le~awphLqlvye~~Lrf~~sp~~d~~vaK~yid~~FvlkLLdLFdSEDpRERe~LKT~LhrI  204 (457)
T KOG2085|consen  127 SVNPTG--FDYEEDEPVLEPAWPHLQLVYEFLLRFLESPDFDPSVAKKYIDQKFVLKLLDLFDSEDPREREFLKTILHRI  204 (457)
T ss_pred             ccCCCc--CCccccCcccCCCchHHHHHHHHHHHHHhCcccCHHHHHHHhhHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Confidence            999986  899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHhhhhhHHHhHHHHHHHhhhhhccccccCChhhhhhhHHHHHHHhhcChhHHhhhhhHHHH
Q psy14681        140 YGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFH  219 (394)
Q Consensus       140 ~~kf~~~r~~iR~~i~~~f~~~i~~si~n~~~~pLe~~~~l~~~~~wP~~kev~fl~eleeil~~~~~~~f~~~~~pLf~  219 (394)
                      ||||+++                                                                         
T Consensus       205 ygKfl~~-------------------------------------------------------------------------  211 (457)
T KOG2085|consen  205 YGKFLVH-------------------------------------------------------------------------  211 (457)
T ss_pred             HHHHhhh-------------------------------------------------------------------------
Confidence            9999998                                                                         


Q ss_pred             HHhhhhcccchhhhHHHhhhhcchhHHHHHHHhhhhhhhhcccccccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q psy14681        220 QIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVL  299 (394)
Q Consensus       220 ~i~~C~~s~~fqv~~~~~~~k~~~~r~~irk~~~~~~~~fiye~~~~~gi~ELLeil~sIi~gf~~plk~eh~~~l~~~l  299 (394)
                                               |+||||+|||+||+|||||++||||+|||||+||||||||.|+|+|||.||.+||
T Consensus       212 -------------------------r~firk~iNNif~~FIyEte~hnGIaELLEIlgSiIngfAlPlKEEhkiFL~rvL  266 (457)
T KOG2085|consen  212 -------------------------RPFIRKSINNIFLRFIYETERHNGIAELLEILGSIINGFALPLKEEHKLFLVRVL  266 (457)
T ss_pred             -------------------------HHHHHHhhcchhhhhcccccccCCHHHHHHHHHHhcCcccCcchhHHHHHHHHhh
Confidence                                     7888888888999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHh------------------------------hhhcCCCCCCCCCCCCCCCCCc---------------ccc---
Q psy14681        300 LRIFAVN------------------------------LFRTLPPSSNPNGAEFDPEEDE---------------PTL---  331 (394)
Q Consensus       300 ipmh~~n------------------------------l~R~wP~~~~~k~~~f~~E~eE---------------pl~---  331 (394)
                      +|||+++                              ++|+||.++++|+|+|++|+||               |++   
T Consensus       267 ipLhk~k~l~~yh~QLaYcivQfveKd~kl~~~VIrglLK~WP~tnS~KEVmFL~ElEEILe~iep~eFqk~~~PLf~qi  346 (457)
T KOG2085|consen  267 IPLHKPKSLSLYHKQLAYCIVQFVEKDPKLTETVIRGLLKYWPKTNSSKEVMFLNELEEILEVIEPSEFQKIMVPLFRQI  346 (457)
T ss_pred             hccccCCCccccccccceeeeeeeccCccccHHHHHHHHHhcCCCCCcceeeeHhhHHHHHHhcCHHHHHHHhHHHHHHH
Confidence            9999997                              9999999999999999999999               454   


Q ss_pred             --ccCChhhHHHHHHHHHHHHHHhhhhccchHHHHHHhhcccccchhhhHHHHhhhhcccCccc
Q psy14681        332 --EAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFL  393 (394)
Q Consensus       332 --~~swpHlQlVy~~lLr~VaerAl~~~~n~~i~~Li~~~~~~i~pi~~~~l~~~~~~HWn~~i  393 (394)
                        |++|+|+|         |||||+++|||+++++|+++|+.+|+|||||||||+|++|||++|
T Consensus       347 a~c~sS~HFQ---------VAEraL~~wnNe~i~~Li~~n~~~ilPiiFpaLyr~sk~hWN~~i  401 (457)
T KOG2085|consen  347 ARCVSSPHFQ---------VAERALYLWNNEYIRSLISQNAEVILPIVFPALYRNSKSHWNQAI  401 (457)
T ss_pred             HHHcCChhHH---------HHHHHHHHHhhHHHHHHHHhccceeeehhhHHHHHHHHHHHHHHH
Confidence              99999999         999999999999999999999999999999999999999999987

>PF01603 B56: Protein phosphatase 2A regulatory B subunit (B56 family); InterPro: IPR002554 Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism Back     alignment and domain information
>KOG2085|consensus Back     alignment and domain information
>PF01603 B56: Protein phosphatase 2A regulatory B subunit (B56 family); InterPro: IPR002554 Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism Back     alignment and domain information
>PLN00122 serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>PLN00122 serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
2npp_B449 Structure Of The Protein Phosphatase 2a Holoenzyme 1e-75
2npp_B449 Structure Of The Protein Phosphatase 2a Holoenzyme 1e-51
2jak_A392 Human Pp2a Regulatory Subunit B56g Length = 392 1e-75
2jak_A392 Human Pp2a Regulatory Subunit B56g Length = 392 3e-48
2iae_B407 Crystal Structure Of A Protein Phosphatase 2a (Pp2a 2e-75
2iae_B407 Crystal Structure Of A Protein Phosphatase 2a (Pp2a 1e-51
3fga_B403 Structural Basis Of Pp2a And Sgo Interaction Length 2e-75
3fga_B403 Structural Basis Of Pp2a And Sgo Interaction Length 1e-51
2nyl_B388 Crystal Structure Of Protein Phosphatase 2a (Pp2a) 1e-64
2nyl_B388 Crystal Structure Of Protein Phosphatase 2a (Pp2a) 6e-50
>pdb|2NPP|B Chain B, Structure Of The Protein Phosphatase 2a Holoenzyme Length = 449 Back     alignment and structure 
Iteration: 1

 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/254 (60%), Positives = 166/254 (65%), Gaps = 60/254 (23%)
Query: 45  LVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNI 104
           +V  FAVN+FRTLPPSSNP GAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNI
Sbjct: 95  VVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNI 154
Query: 105 AKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIH- 163
           AKKYIDQKFVLQLL+LFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYR I+ 
Sbjct: 155 AKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYE 214
Query: 164 --------------GLIYNALKL------------------------------------F 173
                         G I N   L                                    F
Sbjct: 215 TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQF 274
Query: 174 MEMNQKLFDEFAFPL---------PSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKC 224
           +E +  L +     L         P +VMFLNELEEILDVIEP+EF K+M PLF Q+AKC
Sbjct: 275 LEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKC 334
Query: 225 VSSSHFQTTLHRIY 238
           VSS HFQ     +Y
Sbjct: 335 VSSPHFQVAERALY 348
>pdb|2NPP|B Chain B, Structure Of The Protein Phosphatase 2a Holoenzyme Length = 449 Back     alignment and structure
>pdb|2JAK|A Chain A, Human Pp2a Regulatory Subunit B56g Length = 392 Back     alignment and structure
>pdb|2JAK|A Chain A, Human Pp2a Regulatory Subunit B56g Length = 392 Back     alignment and structure
>pdb|2IAE|B Chain B, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 407 Back     alignment and structure
>pdb|2IAE|B Chain B, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 407 Back     alignment and structure
>pdb|3FGA|B Chain B, Structural Basis Of Pp2a And Sgo Interaction Length = 403 Back     alignment and structure
>pdb|3FGA|B Chain B, Structural Basis Of Pp2a And Sgo Interaction Length = 403 Back     alignment and structure
>pdb|2NYL|B Chain B, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 388 Back     alignment and structure
>pdb|2NYL|B Chain B, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 388 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
2npp_B449 PP2A, B subunit, serine/threonine-protein phosphat 5e-62
3fga_B403 Serine/threonine-protein phosphatase 2A 56 kDa RE 2e-61
2jak_A392 Serine/threonine-protein phosphatase 2A 56 kDa RE 2e-59
2jak_A392 Serine/threonine-protein phosphatase 2A 56 kDa RE 3e-36
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20 Length = 449 Back     alignment and structure
 Score =  205 bits (522), Expect = 5e-62
 Identities = 174/355 (49%), Positives = 207/355 (58%), Gaps = 59/355 (16%)

Query: 38  TEEDCQALVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLES 97
           TE     +V  FAVN+FRTLPPSSNP GAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLES
Sbjct: 88  TEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLES 147

Query: 98  PDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNI 157
           PDFQPNIAKKYIDQKFVLQLL+LFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNI
Sbjct: 148 PDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNI 207

Query: 158 FYRTIHG-LIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVP 216
           FYR I+    +N +   +E+   + + FA PL                       KV++P
Sbjct: 208 FYRFIYETEHHNGIAELLEILGSIINGFALPLKE--------------EHKIFLLKVLLP 253

Query: 217 LFHQIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEIL 276
           L     K +S  H Q  L     +FL   + + + +     ++ +   H       L  L
Sbjct: 254 LH--KVKSLSVYHPQ--LAYCVVQFLEKDSTLTEPVVMALLKY-WPKTHSPKEVMFLNEL 308

Query: 277 GSIINGFALPLKDEHKFFLLKVLLRIFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWP 336
             I     L + +  +F  +K++  +F          S +   AE               
Sbjct: 309 EEI-----LDVIEPSEF--VKIMEPLF--RQLAKCVSSPHFQVAE--------------- 344

Query: 337 HLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNK 391
                          RALYYWNNEY M+LI+DNA  I+PIMFP+LYRNSKTHWNK
Sbjct: 345 ---------------RALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNK 384
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B* Length = 403 Back     alignment and structure
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20 Length = 392 Back     alignment and structure
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20 Length = 392 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
3fga_B403 Serine/threonine-protein phosphatase 2A 56 kDa RE 100.0
2npp_B449 PP2A, B subunit, serine/threonine-protein phosphat 100.0
2jak_A392 Serine/threonine-protein phosphatase 2A 56 kDa RE 100.0
2jak_A392 Serine/threonine-protein phosphatase 2A 56 kDa RE 99.9
3fga_B403 Serine/threonine-protein phosphatase 2A 56 kDa RE 99.89
2npp_B449 PP2A, B subunit, serine/threonine-protein phosphat 99.88
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B* Back     alignment and structure
Probab=100.00  E-value=1.6e-94  Score=729.83  Aligned_cols=282  Identities=73%  Similarity=1.160  Sum_probs=269.9

Q ss_pred             ChHHHHHHHHHHHHhCCccccCCCCCCcC------ccc----------------chHhHHHHHHHHHhhhcCCCCCCCCC
Q psy14681          6 ALEERLEASDQFSRRNCLLFRGIPEADPD------KRE----------------TEEDCQALVMAFAVNLFRTLPPSSNP   63 (394)
Q Consensus         6 ~~~e~~~Lf~~Kl~~C~~ifDF~~~~~~d------Kr~----------------te~~~~~ii~Mis~NiFR~lPp~~~~   63 (394)
                      |++||++||++||++||++|||++||.+|      ||+                ||++|+++++|+++||||++||++++
T Consensus         1 ~~~e~~~lf~~Kl~~C~~ifDF~~d~~~d~~~Ke~Kr~~L~el~~~~~~~~~~lte~~~~~~~~Mi~~NiFR~lPp~~~~   80 (403)
T 3fga_B            1 PPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNP   80 (403)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCCSSSSTTTTHHHHHHHHHHHHHHHHHHHHSCSCCCTTHHHHHHHHHHHHHCCCCCCCSSC
T ss_pred             ChhHHHHHHHHHHHHhCCccCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence            68999999999999999999996589888      554                89999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCcchHHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhh
Q psy14681         64 NGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKF  143 (394)
Q Consensus        64 ~~~~fdpeedEp~le~sWPHLqlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~~~kf  143 (394)
                      +|.+||||||||++|+||||||+||++|+||++||+|++++||+|||++||++|+++|+|+|||||+++|+++|||||||
T Consensus        81 ~~~~~d~eedep~~e~sWpHLqlVYe~llrfi~s~~f~~~~~k~~id~~Fi~~Ll~lfdSeDprER~~LktiLhrIY~kf  160 (403)
T 3fga_B           81 TGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKF  160 (403)
T ss_dssp             CSTTCCGGGCCCCCCTTHHHHHHHHHHHHHHHHCTTCCHHHHTTTSCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHC
T ss_pred             ccccCCccccccccccCcHHHHHHHHHHHHHHhccccChhhHHhhcCHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhh
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHhhhhhHHHhHHHHHHHhhhhhccccccCChhhhhhhHHHHHHHhhcChhHHhhhhhHHHHHHhh
Q psy14681        144 LGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAK  223 (394)
Q Consensus       144 ~~~r~~iR~~i~~~f~~~i~~si~n~~~~pLe~~~~l~~~~~wP~~kev~fl~eleeil~~~~~~~f~~~~~pLf~~i~~  223 (394)
                      +++                                                                             
T Consensus       161 ~~~-----------------------------------------------------------------------------  163 (403)
T 3fga_B          161 LGL-----------------------------------------------------------------------------  163 (403)
T ss_dssp             HHH-----------------------------------------------------------------------------
T ss_pred             hhh-----------------------------------------------------------------------------
Confidence            998                                                                             


Q ss_pred             hhcccchhhhHHHhhhhcchhHHHHHHHhhhhhhhhcccccccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHH
Q psy14681        224 CVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIF  303 (394)
Q Consensus       224 C~~s~~fqv~~~~~~~k~~~~r~~irk~~~~~~~~fiye~~~~~gi~ELLeil~sIi~gf~~plk~eh~~~l~~~lipmh  303 (394)
                                           |++||++|+++||+|||||++||||+|||||+||||||||.|||+||+.||.++|+|||
T Consensus       164 ---------------------R~~Irk~innif~~fiye~e~~~GIaeLLeilgsIinGfa~PLkeehk~fl~~vLlPLH  222 (403)
T 3fga_B          164 ---------------------RAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLH  222 (403)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHCCSSCCHHHHHHHHHTTTGGG
T ss_pred             ---------------------HHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHcccCCCchHHHHHHHHHHHHHHH
Confidence                                 77777788888899999999999999999999999999999999999999999999999


Q ss_pred             HHh------------------------------hhhcCCCCCCCCCCCCCCCCCc---------------ccc-----cc
Q psy14681        304 AVN------------------------------LFRTLPPSSNPNGAEFDPEEDE---------------PTL-----EA  333 (394)
Q Consensus       304 ~~n------------------------------l~R~wP~~~~~k~~~f~~E~eE---------------pl~-----~~  333 (394)
                      +++                              ++|+||.++++|+++|++|.++               |+|     |+
T Consensus       223 k~~~~~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~Ele~iLe~~~~~~f~~i~~~lf~~la~ci  302 (403)
T 3fga_B          223 KVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCV  302 (403)
T ss_dssp             GSTTGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcchhhHHHHHHHHHHHHHhCchhHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            997                              9999999999999999999888               333     99


Q ss_pred             CChhhHHHHHHHHHHHHHHhhhhccchHHHHHHhhcccccchhhhHHHHhhhhcccCcccC
Q psy14681        334 AWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFLK  394 (394)
Q Consensus       334 swpHlQlVy~~lLr~VaerAl~~~~n~~i~~Li~~~~~~i~pi~~~~l~~~~~~HWn~~i~  394 (394)
                      +|+|+|         |||||+++|||+++++++++|+++|+|+|+|+||++|++|||++|+
T Consensus       303 ~S~hfq---------VAErAL~~wnNe~i~~li~~n~~~IlPii~p~L~~~~~~HWn~~v~  354 (403)
T 3fga_B          303 SSPHFQ---------VAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIH  354 (403)
T ss_dssp             TCSCHH---------HHHHHHGGGGCHHHHHHHHTTHHHHHHHHHHHHHHTTSCCSCHHHH
T ss_pred             CCCCHH---------HHHHHHHHhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHccCHHHH
Confidence            999999         9999999999999999999999999999999999999999999874
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20 Back     alignment and structure
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20 Back     alignment and structure
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20 Back     alignment and structure
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B* Back     alignment and structure
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 394
d2jaka1343 a.118.1.20 (A:30-372) Serine/threonine-protein pho 4e-70
d2jaka1343 a.118.1.20 (A:30-372) Serine/threonine-protein pho 6e-37
d2jaka1 343 a.118.1.20 (A:30-372) Serine/threonine-protein pho 1e-17
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 343 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: B56-like
domain: Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  221 bits (566), Expect = 4e-70
 Identities = 153/261 (58%), Positives = 167/261 (63%), Gaps = 60/261 (22%)

Query: 38  TEEDCQALVMAFAVNLFRTLPPSSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLES 97
           TE     +V  FAVN+FRTLPPSSNP GAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLES
Sbjct: 59  TEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLES 118

Query: 98  PDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNI 157
           PDFQPNIAKKYIDQKFVLQLL+LFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNI
Sbjct: 119 PDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNI 178

Query: 158 FYRTIHGL-----IYNALKLF-----------MEMNQKLFDEFAFPL------------- 188
           FYR I+       I   L++             E ++    +   PL             
Sbjct: 179 FYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQL 238

Query: 189 -------------------------------PSQVMFLNELEEILDVIEPAEFQKVMVPL 217
                                          P +VMFLNELEEILDVIEP+EF K+M PL
Sbjct: 239 AYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPL 298

Query: 218 FHQIAKCVSSSHFQTTLHRIY 238
           F Q+AKCVSS HFQ     +Y
Sbjct: 299 FRQLAKCVSSPHFQVAERALY 319
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 343 Back     information, alignment and structure
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 343 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
d2jaka1343 Serine/threonine-protein phosphatase 2A regulatory 100.0
d2jaka1343 Serine/threonine-protein phosphatase 2A regulatory 99.84
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: B56-like
domain: Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-84  Score=641.24  Aligned_cols=271  Identities=72%  Similarity=1.137  Sum_probs=244.6

Q ss_pred             CCCCChHHHHHHHHHHHHhCCccccCCCCCCcC------ccc----------------chHhHHHHHHHHHhhhcCCCCC
Q psy14681          2 HGKIALEERLEASDQFSRRNCLLFRGIPEADPD------KRE----------------TEEDCQALVMAFAVNLFRTLPP   59 (394)
Q Consensus         2 ~~~~~~~e~~~Lf~~Kl~~C~~ifDF~~~~~~d------Kr~----------------te~~~~~ii~Mis~NiFR~lPp   59 (394)
                      ++|||++|+++||++||++||++|||++||.+|      ||+                ||++|+++++||++||||++||
T Consensus         1 l~d~~~~e~~~lf~~Kl~~C~~i~DF~~d~~~d~~~K~~K~~~L~el~~~~~~~~~~l~e~~~~~i~~Mi~~NifR~lPp   80 (343)
T d2jaka1           1 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPP   80 (343)
T ss_dssp             CCCCC-CSCSHHHHHHHHHTTCCCCCSSCSSSSHHHHHHHHHHHHHHHHHHTTCCSCCCTTHHHHHHHHHHHHHCSCCCC
T ss_pred             CCCCChHHHHHHHHHHHHHhCcccCCCCCccccHHHHHHHHHHHHHHHHHHccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            689999999999999999999999996689888      443                8999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcccccCCcchHHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Q psy14681         60 SSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRI  139 (394)
Q Consensus        60 ~~~~~~~~fdpeedEp~le~sWPHLqlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~  139 (394)
                      ++++.+.+||+|||||++|+||||||+||++|+||++||+|+++.+|+|||++||.+|+++|+|+|||||+++|+++||+
T Consensus        81 ~~~~~~~~~~~e~d~~~~e~sWpHL~lVY~ill~f~~s~~~~~~~~~~~id~~Fi~~Ll~lf~S~D~rER~~lk~~l~~i  160 (343)
T d2jaka1          81 SSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRI  160 (343)
T ss_dssp             ---------------CCCCTTHHHHHHHHHHHHHHHHCTTCCHHHHTTTSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred             CCCccccccCccccccccCCCCchHHHHHHHHHHHHhccccCchhHHhhCCHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence            99988889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHhhhhhHHHhHHHHHHHhhhhhccccccCChhhhhhhHHHHHHHhhcChhHHhhhhhHHHH
Q psy14681        140 YGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFH  219 (394)
Q Consensus       140 ~~kf~~~r~~iR~~i~~~f~~~i~~si~n~~~~pLe~~~~l~~~~~wP~~kev~fl~eleeil~~~~~~~f~~~~~pLf~  219 (394)
                      ||||+++                                                                         
T Consensus       161 y~kf~~~-------------------------------------------------------------------------  167 (343)
T d2jaka1         161 YGKFLGL-------------------------------------------------------------------------  167 (343)
T ss_dssp             HHHCGGG-------------------------------------------------------------------------
T ss_pred             HHhhhhH-------------------------------------------------------------------------
Confidence            9999998                                                                         


Q ss_pred             HHhhhhcccchhhhHHHhhhhcchhHHHHHHHhhhhhhhhcccccccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q psy14681        220 QIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVL  299 (394)
Q Consensus       220 ~i~~C~~s~~fqv~~~~~~~k~~~~r~~irk~~~~~~~~fiye~~~~~gi~ELLeil~sIi~gf~~plk~eh~~~l~~~l  299 (394)
                                               |++||++++++|++||||+++|+||+||||++|||+|||+.|+|+||+.|+.+++
T Consensus       168 -------------------------R~~Ir~~i~~if~~fi~e~~~~~gI~elLeil~sii~gf~~plkeeh~~f~~~vl  222 (343)
T d2jaka1         168 -------------------------RAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVL  222 (343)
T ss_dssp             -------------------------HHHHHHHHHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTCCSSCCHHHHHHHHHTT
T ss_pred             -------------------------HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence                                     7777777788888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHh------------------------------hhhcCCCCCCCCCCCCCCCCCc---------------ccc---
Q psy14681        300 LRIFAVN------------------------------LFRTLPPSSNPNGAEFDPEEDE---------------PTL---  331 (394)
Q Consensus       300 ipmh~~n------------------------------l~R~wP~~~~~k~~~f~~E~eE---------------pl~---  331 (394)
                      +|||+++                              ++|+||.++++|+++|++|.++               |+|   
T Consensus       223 lPLhk~~~~~~y~~qL~~~v~~f~~kDp~l~~~~i~~llk~WP~t~~~Kev~FL~el~~il~~~~~~~f~~~~~~lf~~l  302 (343)
T d2jaka1         223 LPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQL  302 (343)
T ss_dssp             GGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHSSCSSCCTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred             HHhccCcchHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            9999988                              9999999999999999999999               333   


Q ss_pred             --ccCChhhHHHHHHHHHHHHHHhhhhccchHHHHHHhhcccccchhhhH
Q psy14681        332 --EAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFP  379 (394)
Q Consensus       332 --~~swpHlQlVy~~lLr~VaerAl~~~~n~~i~~Li~~~~~~i~pi~~~  379 (394)
                        |++|+|+|         |||||+++|+|+++++++++|+++|+|+|+|
T Consensus       303 a~ci~S~h~q---------VAErAl~~w~N~~~~~li~~n~~~i~Pii~P  343 (343)
T d2jaka1         303 AKCVSSPHFQ---------VAERALYYWNNEYIMSLISDNAAKILPIMFP  343 (343)
T ss_dssp             HHHHTCSSHH---------HHHHHHGGGGCHHHHHHHHHTHHHHTTTSCC
T ss_pred             HHHhCCCcHH---------HHHHHHHHHCCHHHHHHHHhCccceEeeeCC
Confidence              99999999         9999999999999999999999999999997
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure