Psyllid ID: psy14856

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730----

MLSNLHLNCLILSCVVFFISVHCNKVKNIDEDKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLDTLANLFQNLYGSLEDIKLNFDLDEFVHLTNTKYNTNPVIIHGNGKSKIELNSFGNYLAKSWKTSGCTRCNLIKHLDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHPEYQKSLLPDTVNNQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFLRKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQGTRYIMISFVDP

ccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHccccccEEEEEEEcccEEEEccHHHHHHHHHHccccEEEccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHHcccHHHHccccccccccccHHHccccccccEEEccccccEEEEEEEccccccEEEEcccccccccccccccccccccccccEEEccccccccccccccccEEEEEEEcccccHHHHHHHHHHccccccccEEEEEEccccccHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHccccEEEcccccccccccccccccccccHHcccHHHHHHHcccccccccEEcccEEEEEEEEcccHHccccccccccccccHHHHHHHHHHHccccEEEcccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHcccccccccccccEEEEEEEccccccccccccccccEEEEEccccccccccccEEEEEccccEEEccccEEEEEEcccccccccccccccEEEEEEEEEEcc

cccccEHHHEEEHHHHHHHHHcccccccccHccEEEEEEEcccccHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEccHHHHHHHHHHcccEEEEEccccccccHHHHHHccccccccEEcccccHHcccHHHHHHHHHccccccccccEEEEEEEccHHHHHHcccccccHHHHHHccccccccEEEEEccccEEEEEEEEEccccEEEEcccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEccccccHHHHHHHHHHccccHHHEEEEEEccccccHHHHHHHHHHHcccEEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEEcHHHcccHHHHHHHHHHcccEEEEcccccccEEEcccccccccccEcccHHHHHHHHccHcEEEEEccccEEEEEEEcHHHHHHHHHccccccccccHHHHHHHHHHHcccEEEEEcccccEEEEcccccccccccccHHHHHcccccHHHHcccHHHHHHHccccccccccccEEEcccccHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHcHHHHHccccccccccHEEEEEEEEEccccccccccccccccEEEEEEEccccccccccccEEEEEEEEEccccccEEEccccccccccccccccccEEEEEEEEEcc

mlsnlhlnCLILSCVVFFISVHCnkvknidedKFLVITVASNETDGYKRFIQSAEVNKLQVKTLglhqpwlggdmsslgggykvnllkneldemditddmIILVTDSYDVIIDGGVNDILERFNTFDANIVFgaerlcwpdtslydkypavgsgyrylnsggfiGYAKDIKELISnrsikneeDDQLYYALLFLDETLRTKHKIVLDTLANLFQNLYGSlediklnfdlDEFVHLtntkyntnpviihgngksKIELNSFGNYLAkswktsgctrcnlikhldslkpdqfpsvlisvfIDKPTAFLEEFLNKIANLNYPAKKISMFVYnnqeyhaplfdDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENslhkgvdfyfyvdsdshldnpdVLKYLVNRNEsliapllvrpfkawSNFWgalnadgfyarsfdymniingdqggkgiwnvpyitNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRnkgihlkidstqeyghlvdsenfdpqktnpeVYELIRnpldwdlryihpeyqksllpdtvnnqpcpdvfwfpivtEKFCHEFVQIMEAYgqwsdgtnndkrletgyeavptrdihmkQVGLAGVWAEFLRKYVvplqerefigyhhepvrapmsfvvryrpdeqpslrphhdsstyTINIALNQvgvdyegggcrfirYNCNVTATRMgwmlmhpgrlthyheglqvtqgTRYIMISFVDP

MLSNLHLNCLILSCVVFFISVHCNKvknidedkFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLDTLANLFQNLYGSLEDIKLNFDLDEFVHLTNtkyntnpviihgngkSKIELNSFGNYLAKSWKTSGCTRCNLIKHLDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHPEYQKSLLPDTVNNQPCPDVFWFPIVTEKFCHEFVQIMEAygqwsdgtnnDKRLETGYeavptrdihmKQVGLAGVWAEFLRKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQpslrphhdsstYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHeglqvtqgtRYIMISFVDP

****LHLNCLILSCVVFFISVHCNKVKNIDEDKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLDTLANLFQNLYGSLEDIKLNFDLDEFVHLTNTKYNTNPVIIHGNGKSKIELNSFGNYLAKSWKTSGCTRCNLIKHLDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENF*****NPEVYELIRNPLDWDLRYIHPEYQKSLLPDTVNNQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFLRKYVVPLQEREFIGYHHEPVRAPMSFVVRY***************TYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQGTRYIMISFV**

*****HLNCLILSCVVFFIS*************FLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLDTLANLFQNLYGSLEDIKLNFDLDEFVHLTNTKYNTNPVIIHGNGKSKIELNSFGNYLAKSWKTSGCTRCNLIKHLDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHPEYQKSLL********CPDVFWFPIVTEKFCHEFVQIMEAYGQW**************EAVPTRDIHMKQVGLAGVWAEFLRKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQGTRYIMISFVDP

**SNLHLNCLILSCVVFFISVHCNKVKNIDEDKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLDTLANLFQNLYGSLEDIKLNFDLDEFVHLTNTKYNTNPVIIHGNGKSKIELNSFGNYLAKSWKTSGCTRCNLIKHLDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHPEYQKSLLPDTVNNQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFLRKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSSTYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQGTRYIMISFVDP

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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		734	2.2.26 [Sep-21-2011]
Q5U367		741	Procollagen-lysine,2-oxog	yes	N/A	0.953	0.944	0.476	0.0
Q9R0E1		741	Procollagen-lysine,2-oxog	yes	N/A	0.953	0.944	0.468	0.0
Q5R6K5		738	Procollagen-lysine,2-oxog	yes	N/A	0.953	0.948	0.457	0.0
O60568		738	Procollagen-lysine,2-oxog	yes	N/A	0.953	0.948	0.454	0.0
O77588		726	Procollagen-lysine,2-oxog	no	N/A	0.950	0.961	0.444	0.0
Q02809		727	Procollagen-lysine,2-oxog	no	N/A	0.952	0.961	0.437	0.0
Q5R9N3		727	Procollagen-lysine,2-oxog	no	N/A	0.952	0.961	0.439	0.0
P24802		730	Procollagen-lysine,2-oxog	yes	N/A	0.952	0.957	0.441	0.0
Q9R0B9		737	Procollagen-lysine,2-oxog	no	N/A	0.953	0.949	0.445	0.0
Q20679		730	Procollagen-lysine,2-oxog	yes	N/A	0.949	0.954	0.434	0.0

>sp\|Q5U367\|PLOD3_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Rattus norvegicus GN=Plod3 PE=2 SV=1	Back alignment and function desciption

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/711 (47%), Positives = 484/711 (68%), Gaps = 11/711 (1%)

Query: 29  IDEDKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMS-SLGGGYKVNLL 87
           ++ DK LVITVA+ ET+GY+RF+QSAE     V+TLGL Q W GGD++ ++GGG KV  L
Sbjct: 37  VNPDKLLVITVATAETEGYRRFLQSAEFFNYTVRTLGLGQEWRGGDVARTVGGGQKVRWL 96

Query: 88  KNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDK 147
           K E+++    +DMII+  DSYDVI+     ++L++F    ++++F AE  CWPD  L ++
Sbjct: 97  KKEMEKYASQEDMIIMFVDSYDVILASSPTELLKKFVQSGSHLLFSAESFCWPDWGLAEQ 156

Query: 148 YPAVGSGYRYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLD 207
           YP VG G R+LNSGGFIG+A  I  ++     K+++DDQL+Y  L+LD  LR K K+ LD
Sbjct: 157 YPEVGVGKRFLNSGGFIGFAPTIHRIVRQWKYKDDDDDQLFYTQLYLDPGLREKLKLSLD 216

Query: 208 TLANLFQNLYGSLEDIKLNFDLDEFVHLTNTKYNTNPVIIHGNGKSKIELNSFGNYLAKS 267
             + +FQNL G+L+++ L FD +  V + N  Y+T PV++HGNG +K++LN  GNY+   
Sbjct: 217 HKSRIFQNLNGALDEVVLKFDQNR-VRIRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNG 275

Query: 268 W-KTSGCTRCNLIKH-LDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISM 325
           W    GC  CNL +  L   +P   P VL++VF+++PT FL  FL ++  L+YP  +IS+
Sbjct: 276 WTPQGGCGFCNLNRRTLPGGQPP--PRVLLAVFVEQPTPFLPRFLQRLLLLDYPPDRISL 333

Query: 326 FVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKG-VDFYFY 384
           F++NN+ YH P   D     +  F  VK +     ++S EAR++A+++       +FYF 
Sbjct: 334 FLHNNEVYHEPHIADAWPQLQDHFSAVKLVGPEEALSSGEARDMAMDSCRQNPECEFYFS 393

Query: 385 VDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIING 444
           +D+D+ L NP+ L+ L+ +N  +IAP+L R  K WSNFWGAL+ D +YARS DY+ ++  
Sbjct: 394 LDADAVLTNPETLRILIEQNRKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQR 453

Query: 445 DQGGKGIWNVPYITNCYLMKTSVIKAT-NIKTIYTLNSMDYDMAFCTNLRNKGIHLKIDS 503
            +   G+WNVPYI+  Y+++   ++     K +++ +  D DMAFC ++R+KGI L + +
Sbjct: 454 KR--VGLWNVPYISQAYVIRGETLRTELPEKEVFSSSDTDPDMAFCRSVRDKGIFLHLSN 511

Query: 504 TQEYGHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHPEYQKSLLPDTVNNQPCPDVFW 563
             E+G L+ + ++D    +P+++++  NP+DW  +YIH  Y ++L  + +  QPCPDV+W
Sbjct: 512 QHEFGRLLSTSHYDTDHLHPDLWQIFDNPVDWREQYIHENYSRALDGEGLVEQPCPDVYW 571

Query: 564 FPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFLR 623
           FP++TE+ C E V+ ME YGQWS G + D RL  GYE VPT DIHMKQVG    W + LR
Sbjct: 572 FPLLTEQMCDELVEEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLR 631

Query: 624 KYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSSTYTINIALNQVGVDYE 683
            YV P+ E  F GYH +  RA M+FVVRYRPDEQPSLRPHHDSST+T+N+ALN  GVDYE
Sbjct: 632 TYVGPMTEHLFPGYHTK-TRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGVDYE 690

Query: 684 GGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQGTRYIMISFVDP 734
           GGGCRF+RY+C V++ R GW L+HPGRLTHYHEGL  T+GTRYIM+SFVDP
Sbjct: 691 GGGCRFLRYDCRVSSPRKGWALLHPGRLTHYHEGLPTTRGTRYIMVSFVDP 741

Forms hydroxylysine residues in -Xaa-Lys-Gly- sequences in collagens. These hydroxylysines serve as sites of attachment for carbohydrate units and are essential for the stability of the intermolecular collagen cross-links.
Rattus norvegicus (taxid: 10116)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 4

>sp\|Q9R0E1\|PLOD3_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Mus musculus GN=Plod3 PE=1 SV=1	Back alignment and function description

>sp\|Q5R6K5\|PLOD3_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Pongo abelii GN=PLOD3 PE=2 SV=1	Back alignment and function description

>sp\|O60568\|PLOD3_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens GN=PLOD3 PE=1 SV=1	Back alignment and function description

>sp\|O77588\|PLOD1_BOVIN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Bos taurus GN=PLOD1 PE=2 SV=2	Back alignment and function description

>sp\|Q02809\|PLOD1_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens GN=PLOD1 PE=1 SV=2	Back alignment and function description

>sp\|Q5R9N3\|PLOD1_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Pongo abelii GN=PLOD1 PE=2 SV=1	Back alignment and function description

>sp\|P24802\|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Gallus gallus GN=PLOD1 PE=1 SV=1	Back alignment and function description

>sp\|Q9R0B9\|PLOD2_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus GN=Plod2 PE=2 SV=2	Back alignment and function description

>sp\|Q20679\|PLOD_CAEEL Procollagen-lysine,2-oxoglutarate 5-dioxygenase OS=Caenorhabditis elegans GN=let-268 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		734
328713170		734	PREDICTED: procollagen-lysine,2-oxogluta	0.978	0.978	0.527	0.0
350421678		736	PREDICTED: procollagen-lysine,2-oxogluta	0.987	0.985	0.510	0.0
340726794		736	PREDICTED: procollagen-lysine,2-oxogluta	0.989	0.986	0.508	0.0
157117949		707	procollagen-lysine,2-oxoglutarate 5-diox	0.950	0.987	0.523	0.0
328784759		785	PREDICTED: procollagen-lysine,2-oxogluta	0.987	0.923	0.495	0.0
328713172		784	PREDICTED: procollagen-lysine,2-oxogluta	0.978	0.915	0.493	0.0
383851266		784	PREDICTED: procollagen-lysine,2-oxogluta	0.987	0.924	0.488	0.0
322786337		742	hypothetical protein SINV_01019 [Solenop	0.949	0.939	0.515	0.0
380020387		785	PREDICTED: procollagen-lysine,2-oxogluta	0.974	0.910	0.498	0.0
307183477		787	Procollagen-lysine,2-oxoglutarate 5-diox	0.987	0.921	0.479	0.0

>gi\|328713170\|ref\|XP_003245008.1\| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3-like isoform 2 [Acyrthosiphon pisum]	Back alignment and taxonomy information

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/732 (52%), Positives = 505/732 (68%), Gaps = 14/732 (1%)

Query: 11  ILSCVVFFISVHCNKVKNIDEDK---FLVITVASNETDGYKRFIQSAEVNKLQVKTLGLH 67
           I  C +FFI    +  K++        LV+TVAS + DG+KRFI SA +N L+ K LG+ 
Sbjct: 9   IAICGLFFILDSASTKKDVSAKSDLNLLVLTVASEKNDGFKRFIDSANLNGLKTKVLGVD 68

Query: 68  QPWLGGDMSSLGGGYKVNLLKNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFD 127
           +PW GG+M+S+GGGYK+NL    L+     D++ +L+TD+YDV++    + IL  F  FD
Sbjct: 69  KPWQGGNMNSVGGGYKLNLYLEALEPYKNNDNLAVLLTDAYDVVLLANSSTILNAFTEFD 128

Query: 128 ANIVFGAERLCWPDTSLYDKYPAVG-SGYRYLNSGGFIGYAKDIKELISNRSIKNEEDDQ 186
           ++IV   E  CWPD  L DKYP V  +GYR++NSGG IGYA  + +L+S + IKN  DDQ
Sbjct: 129 SSIVISTENSCWPDRKLADKYPTVDLNGYRFINSGGIIGYASQLYKLLSEKPIKNLGDDQ 188

Query: 187 LYYALLFLDETLRTKHKIVLDTLANLFQNLYGSLEDIKLNFDLDEFVHLTNTKYNTNPVI 246
           L+   L+LD  LR K  I LD  A LFQN+Y + +DIKL      +V L N  +NT P +
Sbjct: 189 LHLTNLYLDTDLREKLNIKLDNYAKLFQNVYLAEDDIKLKLVNKSYV-LENINFNTQPAV 247

Query: 247 IHGNGKSKIELNSFGNYLAKSWK-TSGCTRC---NLIKHLDSLKPDQFPSVLISVFIDKP 302
           IHGNG SKI  NS+ NY+   W   SGC  C   NL   L +LK + +P VL+S+ +DKP
Sbjct: 248 IHGNGLSKITFNSYTNYIPNKWSPESGCKTCYDNNL--DLSTLKEENYPKVLLSIIVDKP 305

Query: 303 TAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVN 362
           T F +EFL+KI N++YP  ++ + +    +YH    D +I      + N  ++ H +   
Sbjct: 306 TPFFDEFLDKIENIDYPKSRLCLSITTLVDYHKEHVDKFISKIGDKY-NASFVFHKTAEE 364

Query: 363 SKEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNF 422
           S  AR+ +      K  DF FY+++++HLDNP  LK L+ RN+ +IAP+L RPFKAWSNF
Sbjct: 365 SIHARHFSFSLCTSKLCDFLFYIENEAHLDNPQTLKILIQRNKKIIAPMLTRPFKAWSNF 424

Query: 423 WGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIKTIYTLNSM 482
           WGAL+ +GFYARSFDYM+I+N ++   GIWNVPYI++CYLMK ++++    +  Y  +++
Sbjct: 425 WGALSKEGFYARSFDYMDIVNYNK--TGIWNVPYISSCYLMKGTILENKYTRPSYKEDNL 482

Query: 483 DYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHP 542
           DYDMAF  +LR KG+ + ID+   YGHL+DSE+FD    NPEVY++  N  DW+ RYIHP
Sbjct: 483 DYDMAFSKSLREKGVFMYIDNQYTYGHLIDSESFDITLKNPEVYQIFENRYDWEQRYIHP 542

Query: 543 EYQKSLLPDTVNNQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAV 602
           EY ++  PD    +PCPDVFWFPI+TE+FC EF++IME +GQWSDGTNND RL TGYEAV
Sbjct: 543 EYMENFNPDKKPAEPCPDVFWFPILTEQFCQEFIEIMENFGQWSDGTNNDTRLRTGYEAV 602

Query: 603 PTRDIHMKQVGLAGVWAEFLRKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRP 662
           PTRDIHM QVGL   W EFLR YV P+Q++ FIGY H+P R+ M+FVV+Y P  Q SLRP
Sbjct: 603 PTRDIHMNQVGLEKHWLEFLRSYVQPIQKKAFIGYTHDPPRSLMNFVVKYNPLGQASLRP 662

Query: 663 HHDSSTYTINIALNQVGVDYEGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQ 722
           HHDSSTYTINIALN  G DY+GGGC F+RY C VT  ++GWMLMHPGRLTHYHEGL+VT 
Sbjct: 663 HHDSSTYTINIALNSPGKDYQGGGCHFLRYKCKVTDLKVGWMLMHPGRLTHYHEGLEVTN 722

Query: 723 GTRYIMISFVDP 734
           GTRYIMISFVDP
Sbjct: 723 GTRYIMISFVDP 734

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|350421678\|ref\|XP_003492921.1\| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3-like isoform 1 [Bombus impatiens] gi\|350421681\|ref\|XP_003492922.1\| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3-like isoform 2 [Bombus impatiens]	Back alignment and taxonomy information

>gi\|340726794\|ref\|XP_003401738.1\| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3-like isoform 1 [Bombus terrestris]	Back alignment and taxonomy information

>gi\|157117949\|ref\|XP_001653115.1\| procollagen-lysine,2-oxoglutarate 5-dioxygenase [Aedes aegypti] gi\|108875910\|gb\|EAT40135.1\| AAEL008099-PA [Aedes aegypti]	Back alignment and taxonomy information

>gi\|328784759\|ref\|XP_003250492.1\| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3-like [Apis mellifera]	Back alignment and taxonomy information

>gi\|328713172\|ref\|XP_001943472.2\| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3-like isoform 1 [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|383851266\|ref\|XP_003701155.1\| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3-like [Megachile rotundata]	Back alignment and taxonomy information

>gi\|322786337\|gb\|EFZ12885.1\| hypothetical protein SINV_01019 [Solenopsis invicta]	Back alignment and taxonomy information

>gi\|380020387\|ref\|XP_003694068.1\| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3-like [Apis florea]	Back alignment and taxonomy information

>gi\|307183477\|gb\|EFN70276.1\| Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 [Camponotus floridanus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		734
RGD\|631339		741	Plod3 "procollagen-lysine, 2-o	0.952	0.943	0.477	4.3e-189
FB\|FBgn0036147		721	Plod "procollagen lysyl hydrox	0.942	0.959	0.484	9.1e-187
MGI\|MGI:1347008		741	Plod3 "procollagen-lysine, 2-o	0.952	0.943	0.469	1.9e-186
UNIPROTKB\|F1MET0		751	PLOD3 "Uncharacterized protein	0.952	0.930	0.459	2.9e-183
ZFIN\|ZDB-GENE-021031-4		730	plod3 "procollagen-lysine, 2-o	0.950	0.956	0.460	2e-182
UNIPROTKB\|E2RTL4		740	PLOD3 "Uncharacterized protein	0.952	0.944	0.459	4.2e-182
UNIPROTKB\|O60568		738	PLOD3 "Procollagen-lysine,2-ox	0.953	0.948	0.454	1.6e-180
ZFIN\|ZDB-GENE-030131-3165		730	plod1a "procollagen-lysine 1,	0.974	0.979	0.433	3.9e-179
UNIPROTKB\|F1P9Z8		727	PLOD1 "Uncharacterized protein	0.952	0.961	0.446	3.1e-177
ZFIN\|ZDB-GENE-070326-1		754	plod2 "procollagen-lysine, 2-o	0.677	0.659	0.388	1.7e-176

RGD\|631339 Plod3 "procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

 Score = 1833 (650.3 bits), Expect = 4.3e-189, P = 4.3e-189
 Identities = 340/712 (47%), Positives = 486/712 (68%)

Query:    29 IDEDKFLVITVASNETDGYKRFIQSAEVNKLQVKTLGLHQPWLGGDMS-SLGGGYKVNLL 87
             ++ DK LVITVA+ ET+GY+RF+QSAE     V+TLGL Q W GGD++ ++GGG KV  L
Sbjct:    37 VNPDKLLVITVATAETEGYRRFLQSAEFFNYTVRTLGLGQEWRGGDVARTVGGGQKVRWL 96

Query:    88 KNELDEMDITDDMIILVTDSYDVIIDGGVNDILERFNTFDANIVFGAERLCWPDTSLYDK 147
             K E+++    +DMII+  DSYDVI+     ++L++F    ++++F AE  CWPD  L ++
Sbjct:    97 KKEMEKYASQEDMIIMFVDSYDVILASSPTELLKKFVQSGSHLLFSAESFCWPDWGLAEQ 156

Query:   148 YPAVGSGYRYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLD 207
             YP VG G R+LNSGGFIG+A  I  ++     K+++DDQL+Y  L+LD  LR K K+ LD
Sbjct:   157 YPEVGVGKRFLNSGGFIGFAPTIHRIVRQWKYKDDDDDQLFYTQLYLDPGLREKLKLSLD 216

Query:   208 TLANLFQNLYGSLEDIKLNFDLDEFVHLTNTKYNTNPVIIHGNGKSKIELNSFGNYLAKS 267
               + +FQNL G+L+++ L FD +  V + N  Y+T PV++HGNG +K++LN  GNY+   
Sbjct:   217 HKSRIFQNLNGALDEVVLKFDQNR-VRIRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNG 275

Query:   268 WKTSG-CTRCNLIKH-LDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISM 325
             W   G C  CNL +  L   +P   P VL++VF+++PT FL  FL ++  L+YP  +IS+
Sbjct:   276 WTPQGGCGFCNLNRRTLPGGQPP--PRVLLAVFVEQPTPFLPRFLQRLLLLDYPPDRISL 333

Query:   326 FVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKG-VDFYFY 384
             F++NN+ YH P   D     +  F  VK +     ++S EAR++A+++       +FYF 
Sbjct:   334 FLHNNEVYHEPHIADAWPQLQDHFSAVKLVGPEEALSSGEARDMAMDSCRQNPECEFYFS 393

Query:   385 VDSDSHLDNPDVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIING 444
             +D+D+ L NP+ L+ L+ +N  +IAP+L R  K WSNFWGAL+ D +YARS DY+ ++  
Sbjct:   394 LDADAVLTNPETLRILIEQNRKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQR 453

Query:   445 DQGGKGIWNVPYITNCYLMKTSVIKATNI--KTIYTLNSMDYDMAFCTNLRNKGIHLKID 502
              +   G+WNVPYI+  Y+++   ++ T +  K +++ +  D DMAFC ++R+KGI L + 
Sbjct:   454 KR--VGLWNVPYISQAYVIRGETLR-TELPEKEVFSSSDTDPDMAFCRSVRDKGIFLHLS 510

Query:   503 STQEYGHLVDSENFDPQKTNPEVYELIRNPLDWDLRYIHPEYQKSLLPDTVNNQPCPDVF 562
             +  E+G L+ + ++D    +P+++++  NP+DW  +YIH  Y ++L  + +  QPCPDV+
Sbjct:   511 NQHEFGRLLSTSHYDTDHLHPDLWQIFDNPVDWREQYIHENYSRALDGEGLVEQPCPDVY 570

Query:   563 WFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFL 622
             WFP++TE+ C E V+ ME YGQWS G + D RL  GYE VPT DIHMKQVG    W + L
Sbjct:   571 WFPLLTEQMCDELVEEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLL 630

Query:   623 RKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHDSSTYTINIALNQVGVDY 682
             R YV P+ E  F GYH +  RA M+FVVRYRPDEQPSLRPHHDSST+T+N+ALN  GVDY
Sbjct:   631 RTYVGPMTEHLFPGYHTK-TRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGVDY 689

Query:   683 EGGGCRFIRYNCNVTATRMGWMLMHPGRLTHYHEGLQVTQGTRYIMISFVDP 734
             EGGGCRF+RY+C V++ R GW L+HPGRLTHYHEGL  T+GTRYIM+SFVDP
Sbjct:   690 EGGGCRFLRYDCRVSSPRKGWALLHPGRLTHYHEGLPTTRGTRYIMVSFVDP 741

GO:0001701 "in utero embryonic development" evidence=IEA;ISO

GO:0001886 "endothelial cell morphogenesis" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005506 "iron ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008104 "protein localization" evidence=IEA;ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0008475 "procollagen-lysine 5-dioxygenase activity" evidence=IEA;ISO

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0021915 "neural tube development" evidence=IEA;ISO

GO:0030199 "collagen fibril organization" evidence=IEA;ISO

GO:0030867 "rough endoplasmic reticulum membrane" evidence=IEA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0032870 "cellular response to hormone stimulus" evidence=IEP

GO:0033823 "procollagen glucosyltransferase activity" evidence=IEA;ISO

GO:0042311 "vasodilation" evidence=IEA;ISO

GO:0048730 "epidermis morphogenesis" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0060425 "lung morphogenesis" evidence=IEA;ISO

GO:0070831 "basement membrane assembly" evidence=IEA;ISO

FB\|FBgn0036147 Plod "procollagen lysyl hydroxylase" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

MGI\|MGI:1347008 Plod3 "procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MET0 PLOD3 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-021031-4 plod3 "procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RTL4 PLOD3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|O60568 PLOD3 "Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-3165 plod1a "procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1a" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P9Z8 PLOD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070326-1 plod2 "procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R6K5	PLOD3_PONAB	1, ., 1, 4, ., 1, 1, ., 4	0.4571	0.9536	0.9485	yes	N/A
Q20679	PLOD_CAEEL	1, ., 1, 4, ., 1, 1, ., 4	0.4345	0.9495	0.9547	yes	N/A
P24802	PLOD1_CHICK	1, ., 1, 4, ., 1, 1, ., 4	0.4414	0.9523	0.9575	yes	N/A
Q9R0E1	PLOD3_MOUSE	1, ., 1, 4, ., 1, 1, ., 4	0.4683	0.9536	0.9446	yes	N/A
O60568	PLOD3_HUMAN	1, ., 1, 4, ., 1, 1, ., 4	0.4542	0.9536	0.9485	yes	N/A
Q5U367	PLOD3_RAT	1, ., 1, 4, ., 1, 1, ., 4	0.4767	0.9536	0.9446	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.14.11	0.921
4th Layer	1.14.11.4	0.914

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		734
smart00702		165	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subun	4e-21
pfam03171		96	pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe	4e-10

>gnl\|CDD\|214780 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues	Back alignment and domain information

 Score = 90.5 bits (225), Expect = 4e-21
 Identities = 34/179 (18%), Positives = 54/179 (30%), Gaps = 29/179 (16%)

Query: 568 TEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVW-----AEFL 622
           +   C + ++  E  G W                 P      +Q    G W      + +
Sbjct: 1   SPAECQKLLEEAEPLG-WRGEVTRGIG-------NPNETSQYRQSN--GTWLELLERDLV 50

Query: 623 RKYVVPLQEREFIGYHHEPVRAPMSFVVRYRPDEQPSLRPHHD-----SSTYTINIALNQ 677
            + +              P+ A  + V RY P       PH D         T  + LN 
Sbjct: 51  IERIRQRLADFLGLLAGLPLSAEDAQVARYGPG--GHYGPHVDNFLYGDRIATFILYLND 108

Query: 678 VGVDYEGGGCRF---IRYNCNVTATRMGWMLMHP-GRLTHYHEGLQVTQGTRYIMISFV 732
           V    EGG   F             + G +L  P G     H    VT+G+R+ +  ++
Sbjct: 109 V---EEGGELVFPGLRLMVVATVKPKKGDLLFFPSGHGRSLHGVCPVTRGSRWAITGWI 164

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor. Length = 165

>gnl\|CDD\|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		734
KOG1971\|consensus		415		100.0
KOG4179\|consensus		568		100.0
PRK05467		226	Fe(II)-dependent oxygenase superfamily protein; Pr	99.75
cd06437		232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	99.7
smart00702		178	P4Hc Prolyl 4-hydroxylase alpha subunit homologues	99.68
cd06427		241	CESA_like_2 CESA_like_2 is a member of the cellulo	99.68
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	99.68
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	99.67
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	99.65
PRK11204		420	N-glycosyltransferase; Provisional	99.65
PRK14583		444	hmsR N-glycosyltransferase; Provisional	99.65
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	99.63
KOG1971\|consensus		415		99.63
TIGR03111		439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	99.62
cd06435		236	CESA_NdvC_like NdvC_like proteins in this family a	99.61
COG1216		305	Predicted glycosyltransferases [General function p	99.61
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	99.61
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	99.6
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	99.6
PRK10073		328	putative glycosyl transferase; Provisional	99.58
cd04185		202	GT_2_like_b Subfamily of Glycosyltransferase Famil	99.58
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	99.57
COG1215		439	Glycosyltransferases, probably involved in cell wa	99.57
cd04184		202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	99.54
PF03452		269	Anp1: Anp1; InterPro: IPR005109 The members of thi	99.54
PLN02726		243	dolichyl-phosphate beta-D-mannosyltransferase	99.52
PRK14716		504	bacteriophage N4 adsorption protein B; Provisional	99.52
cd06913		219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	99.5
cd06442		224	DPM1_like DPM1_like represents putative enzymes si	99.49
PRK11498		852	bcsA cellulose synthase catalytic subunit; Provisi	99.49
cd02522		221	GT_2_like_a GT_2_like_a represents a glycosyltrans	99.48
cd04196		214	GT_2_like_d Subfamily of Glycosyltransferase Famil	99.47
TIGR03030		713	CelA cellulose synthase catalytic subunit (UDP-for	99.46
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	99.46
cd04192		229	GT_2_like_e Subfamily of Glycosyltransferase Famil	99.46
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	99.45
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	99.45
cd06433		202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	99.44
cd06438		183	EpsO_like EpsO protein participates in the methano	99.42
TIGR01556		281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	99.39
PRK10018		279	putative glycosyl transferase; Provisional	99.39
cd06434		235	GT2_HAS Hyaluronan synthases catalyze polymerizati	99.38
cd06420		182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	99.37
cd04188		211	DPG_synthase DPG_synthase is involved in protein N	99.36
PRK11234		727	nfrB bacteriophage N4 adsorption protein B; Provis	99.35
PLN00052		310	prolyl 4-hydroxylase; Provisional	99.29
cd04191		254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	99.26
PRK10063		248	putative glycosyl transferase; Provisional	99.26
PF00535		169	Glycos_transf_2: Glycosyl transferase family 2; In	99.23
cd04179		185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	99.21
cd06423		180	CESA_like CESA_like is the cellulose synthase supe	99.19
PRK15489		703	nfrB bacteriophage N4 adsorption protein B; Provis	99.19
PTZ00260		333	dolichyl-phosphate beta-glucosyltransferase; Provi	99.19
cd06436		191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	99.18
PHA02869		418	C4L/C10L-like gene family protein; Provisional	99.17
cd04190		244	Chitin_synth_C C-terminal domain of Chitin Synthas	99.16
PF10111		281	Glyco_tranf_2_2: Glycosyltransferase like family 2	99.14
PHA02813		354	hypothetical protein; Provisional	99.07
COG0463		291	WcaA Glycosyltransferases involved in cell wall bi	98.99
PRK05454		691	glucosyltransferase MdoH; Provisional	98.92
cd02511		229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	98.91
PRK10714		325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	98.91
cd04187		181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	98.91
COG3128		229	PiuC Uncharacterized iron-regulated protein [Funct	98.85
PRK13915		306	putative glucosyl-3-phosphoglycerate synthase; Pro	98.84
cd00761		156	Glyco_tranf_GTA_type Glycosyltransferase family A	98.8
PF13640		100	2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily;	98.71
KOG2978\|consensus		238		98.21
PF03171		98	2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent	98.09
PF13712		217	Glyco_tranf_2_5: Glycosyltransferase like family;	97.79
PF13704		97	Glyco_tranf_2_4: Glycosyl transferase family 2	97.66
KOG1591\|consensus		289		97.61
PF13506		175	Glyco_transf_21: Glycosyl transferase family 21	97.49
KOG3736\|consensus		578		97.25
PF09859		173	Oxygenase-NA: Oxygenase, catalysing oxidative meth	97.2
KOG2547\|consensus		431		97.18
PF13632		193	Glyco_trans_2_3: Glycosyl transferase family group	97.09
PF03142		527	Chitin_synth_2: Chitin synthase; InterPro: IPR0048	97.08
KOG2977\|consensus		323		97.06
cd02514		334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	96.78
PF05679		499	CHGN: Chondroitin N-acetylgalactosaminyltransferas	96.71
COG4092		346	Predicted glycosyltransferase involved in capsule	96.67
TIGR02466		201	conserved hypothetical protein. This family consis	96.52
PF12851		171	Tet_JBP: Oxygenase domain of the 2OGFeDO superfami	95.99
cd00899		219	b4GalT Beta-4-Galactosyltransferase is involved in	95.97
TIGR02408		277	ectoine_ThpD ectoine hydroxylase. Both ectoine and	95.94
KOG3738\|consensus		559		95.78
PF13661		70	2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily	95.75
COG3826		236	Uncharacterized protein conserved in bacteria [Fun	95.71
PF05721		211	PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro:	95.39
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	95.35
PF11735		241	CAP59_mtransfer: Cryptococcal mannosyltransferase	95.29
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	95.16
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	95.1
PLN02893		734	Cellulose synthase-like protein	95.09
KOG3737\|consensus		603		94.43
PF13759		101	2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB	94.15
TIGR01762		288	chlorin-enz chlorinating enzymes. This model repre	94.13
PF03336		339	Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR	93.86
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	93.79
KOG3588\|consensus		494		93.19
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	92.5
COG2943		736	MdoH Membrane glycosyltransferase [Cell envelope b	92.27
PF13733		136	Glyco_transf_7N: N-terminal region of glycosyl tra	91.34
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	91.01
PF01762		195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	90.39
PF09488		381	Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas	88.58
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	88.2
cd02515		271	Glyco_transf_6 Glycosyltransferase family 6 compri	86.75
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	86.6
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	85.68
PLN03181		453	glycosyltransferase; Provisional	84.88
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	84.52
cd04182		186	GT_2_like_f GT_2_like_f is a subfamily of the glyc	83.04
KOG3916\|consensus		372		82.85
PRK14503		393	mannosyl-3-phosphoglycerate synthase; Provisional	82.75
cd02523		229	PC_cytidylyltransferase Phosphocholine cytidylyltr	82.57
PF12804		160	NTP_transf_3: MobA-like NTP transferase domain; PD	82.55
PF03071		434	GNT-I: GNT-I family; InterPro: IPR004139 The biosy	82.36
TIGR02460		381	osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	81.86
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	81.29
PRK15401		213	alpha-ketoglutarate-dependent dioxygenase AlkB; Pr	80.57
PF11397		343	GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IP	80.11

>KOG1971\|consensus	Back alignment and domain information

Probab=100.00  E-value=3.3e-84  Score=691.14  Aligned_cols=413  Identities=38%  Similarity=0.745  Sum_probs=395.8

Q ss_pred             cccccceeeeeHHHHHHHHHhccCCCCCChhHHHHHhhhchhhhccccccccccccccccccCCcccceecccCCCceeE
Q psy14856        156 RYLNSGGFIGYAKDIKELISNRSIKNEEDDQLYYALLFLDETLRTKHKIVLDTLANLFQNLYGSLEDIKLNFDLDEFVHL  235 (734)
Q Consensus       156 R~LNSG~~iG~a~~l~~l~~~~~~~d~~dDQl~~t~i~l~~~~r~~~~i~lD~~s~iFqnl~g~~~dv~l~~~~~~~~r~  235 (734)
                      ||||||||||||+.+.+++ .|+++|.+|                 ++|++||+|++|||++|+.+||+|+|+ ++..|+
T Consensus         1 r~l~sggf~g~a~~~~q~~-~~~~~d~~d-----------------~ni~ld~~~~~fq~l~g~~~dv~Lkf~-~~~~~~   61 (415)
T KOG1971|consen    1 RFLNSGGFIGYAPQVHQIV-QWPIEDTDD-----------------LNITLDHRSRIFQNLNGAYEDVVLKFS-SGQVRA   61 (415)
T ss_pred             CccccCCccccCccccccc-ccccCcchh-----------------hcccccCcCcccccCcCCcCCeeEecc-cCchhh
Confidence            7999999999999999999 999998888                 799999999999999999999999999 999999


Q ss_pred             EeeccCccceEEecCCCcccccccccccccccccccCCeeccCcc-ccCCCCCCCCCcEEEEEEecCChhHHHHHHHHHH
Q psy14856        236 TNTKYNTNPVIIHGNGKSKIELNSFGNYLAKSWKTSGCTRCNLIK-HLDSLKPDQFPSVLISVFIDKPTAFLEEFLNKIA  314 (734)
Q Consensus       236 ~n~~~~t~P~vih~Ng~~k~~ln~l~ny~~~~w~~~gc~~c~~~~-~l~~~~~~~~P~V~I~I~i~n~~~~L~~fL~sL~  314 (734)
                      .|++|.|+|+++|||||+|.+||+||||+|+.|+  +|..|.++. ++.+.   .                    ++.|.
T Consensus        62 ln~~~pt~~l~~~~n~~~K~~~d~l~nY~~r~~~--~~~l~~~~~r~~~~s---~--------------------~q~l~  116 (415)
T KOG1971|consen   62 LNVAYPTLPLTVHGNGPAKFMLDYLGNYIPREWT--GCSLCCKNYRELIKS---N--------------------LQRLL  116 (415)
T ss_pred             hhhcCCCcceeeccCccHHHHHHHHhhhcchhhh--hhhccccccchhhhh---c--------------------cccch
Confidence            9999999999999999999999999999999997  799999887 76652   2                    89999


Q ss_pred             cccCCCceEEEEEecCCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHHHHHHHhhhhcCccEEEEECCCccCCCh
Q psy14856        315 NLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEARNLAVENSLHKGVDFYFYVDSDSHLDNP  394 (734)
Q Consensus       315 ~LdYPk~ri~l~I~ns~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~arN~al~~a~~~~~DYlf~vDAD~~L~np  394 (734)
                      .++||++...++|.|....+.+.++.+..++.++|...+++.+....+..+||+++++.|+     | |++|||.++++|
T Consensus       117 ~~~Y~~dp~~l~i~n~~~~~~~~~~~~~~~~~~e~~p~~~v~~~~~~~~~ea~~~evE~~r-----~-~~~dad~~i~~P  190 (415)
T KOG1971|consen  117 ELDYPLDPENLFIPNFEVAHSANIKEFFRRHGSEYSPGKFVFPMFQPDFSEARLMEVEHFR-----K-FSVDADFVITRP  190 (415)
T ss_pred             hccCCCCHHHhccccccccchhccHHHHHHhccccCCeeEEeeccCccHHHHHHHHHHHhh-----h-cccccceeccCC
Confidence            9999999999999999999999999999999999999999999999999999999999986     6 999999999999


Q ss_pred             HHHHHHHHcCCceeeecccCCCcccccccccccCCccccchHHHHHHHhcccCCcceeeeceeeeEEeeehhhHhhcccc
Q psy14856        395 DVLKYLVNRNESLIAPLLVRPFKAWSNFWGALNADGFYARSFDYMNIINGDQGGKGIWNVPYITNCYLMKTSVIKATNIK  474 (734)
Q Consensus       395 ~tL~~LI~~nk~IVaP~l~~~~~~wsNFWgal~~~GyY~Rsedy~~i~~~~~~~~G~~nVP~v~~~~LI~~~vL~~~~~~  474 (734)
                      ++++.|+..++.+||||++++++||+|||++++.+|||+||+||++|+++++  +|+|+||+|.++||++...++. +  
T Consensus       191 ~~~~~li~~~k~~ia~l~~~~~kL~enF~~al~~~~yyars~dy~~~v~g~~--vg~~~~P~v~~~yl~~~~~f~~-e--  265 (415)
T KOG1971|consen  191 NTLRNLIVLNKEFIAPLVSRHGKLWENFWGALSADGYYARSEDYVDIVQGNR--VGVWNVPYVCGAYLDSHDAFRV-E--  265 (415)
T ss_pred             hhHHHHHHHhhhccchhhhhhHHHHHHhhhhhccccchhhhhhhhhhhcccc--eeEEeecccceeEEecccceee-e--
Confidence            9999999999999999999999999999999999999999999999999999  9999999999999999888886 3  


Q ss_pred             cccccCCCchhHHHHHHHHHcCeeEEEecccceEEeeccCCCCCCCCCc-cceecccCcchhhhhccchHHHhhhCCCCC
Q psy14856        475 TIYTLNSMDYDMAFCTNLRNKGIHLKIDSTQEYGHLVDSENFDPQKTNP-EVYELIRNPLDWDLRYIHPEYQKSLLPDTV  553 (734)
Q Consensus       475 ~~f~~~~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~~~~~~~~~~~h~-~l~~~~~n~~dw~e~yihp~y~~~~~~~~~  553 (734)
                        ......|+||.||..+|..|++|+++|+.++|+|+..++|.++|+|+ ++|+||+|+.+|.++|||++|.+.....+.
T Consensus       266 --~~~~~~Dpdm~~~~~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~~~~~EiFdn~h~p~qa~LHrg~~~~~a~~~~  343 (415)
T KOG1971|consen  266 --SSEDNRDPDMGFCVDAREVGLFVCLSNQFEGGELLFTGKYCTKHLRTDDLWEIFDNSHDPGQAYLHRGYHKHGARATI  343 (415)
T ss_pred             --ccCcCCCCccccccchhhcceeEEecccccCCeeEeeccccccccCCCchhhhccCcCCCccceecCcchhccccccC
Confidence              24566899999999999999999999999999999999999999999 999999999999999999999999998878


Q ss_pred             CCCCCCceecCCCCChHHHHHHHHHHHHhCCCCCCCCCCcccCCCcccccccCeeeeccchHHHHHHHHHHhhc
Q psy14856        554 NNQPCPDVFWFPIVTEKFCHEFVQIMEAYGQWSDGTNNDKRLETGYEAVPTRDIHMKQVGLAGVWAEFLRKYVV  627 (734)
Q Consensus       554 ~~~~~p~Vy~fpv~s~~fC~~Li~e~E~~g~ws~~~~~~~r~~g~~~~vpt~di~~~~~g~~~~~~~~l~~~v~  627 (734)
                      +.+|||+|||||++  ++|++|+++||+|++|++|.+.++|++|||++|||+||||+++|+++.|+.+++.|++
T Consensus       344 ~~~~~~nv~~~~~~--~~c~el~~~me~f~~Ws~g~~~D~r~~~gye~~~trdi~m~q~~~e~~~~~~~~~~~~  415 (415)
T KOG1971|consen  344 VGQPCPNVYWFPIS--SLCDELVEEMEEFGRWSGGCAEDKRLAGGYENVPTRDIHMRQVGFERLWLKFLRTYVR  415 (415)
T ss_pred             CCCCCCceeeehhH--HHHHHHHHHHHHhhcccccchhhhhhcCCcccCCchhhHHHhhhhHHHHHHHHHHhhC
Confidence            99999999999999  9999999999999999999999999999999999999999999999999999999874

>KOG4179\|consensus	Back alignment and domain information

>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional	Back alignment and domain information

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex	Back alignment and domain information

>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues	Back alignment and domain information

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>PRK14583 hmsR N-glycosyltransferase; Provisional	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>KOG1971\|consensus	Back alignment and domain information

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111	Back alignment and domain information

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	Back alignment and domain information

>COG1216 Predicted glycosyltransferases [General function prediction only]	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>PRK10073 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis	Back alignment and domain information

>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function	Back alignment and domain information

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase	Back alignment and domain information

>PRK14716 bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine	Back alignment and domain information

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1	Back alignment and domain information

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function	Back alignment and domain information

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis	Back alignment and domain information

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis	Back alignment and domain information

>TIGR01556 rhamnosyltran L-rhamnosyltransferase	Back alignment and domain information

>PRK10018 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan	Back alignment and domain information

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase	Back alignment and domain information

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation	Back alignment and domain information

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>PLN00052 prolyl 4-hydroxylase; Provisional	Back alignment and domain information

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan	Back alignment and domain information

>PRK10063 putative glycosyl transferase; Provisional	Back alignment and domain information

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	Back alignment and domain information

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional	Back alignment and domain information

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine	Back alignment and domain information

>PHA02869 C4L/C10L-like gene family protein; Provisional	Back alignment and domain information

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin	Back alignment and domain information

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]	Back alignment and domain information

>PHA02813 hypothetical protein; Provisional	Back alignment and domain information

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK05454 glucosyltransferase MdoH; Provisional	Back alignment and domain information

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	Back alignment and domain information

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	Back alignment and domain information

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1	Back alignment and domain information

>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]	Back alignment and domain information

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	Back alignment and domain information

>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A	Back alignment and domain information

>KOG2978\|consensus	Back alignment and domain information

>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit	Back alignment and domain information

>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B	Back alignment and domain information

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2	Back alignment and domain information

>KOG1591\|consensus	Back alignment and domain information

>PF13506 Glyco_transf_21: Glycosyl transferase family 21	Back alignment and domain information

>KOG3736\|consensus	Back alignment and domain information

>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function	Back alignment and domain information

>KOG2547\|consensus	Back alignment and domain information

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2	Back alignment and domain information

>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2	Back alignment and domain information

>KOG2977\|consensus	Back alignment and domain information

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides	Back alignment and domain information

>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase	Back alignment and domain information

>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>TIGR02466 conserved hypothetical protein	Back alignment and domain information

>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []	Back alignment and domain information

>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids	Back alignment and domain information

>TIGR02408 ectoine_ThpD ectoine hydroxylase	Back alignment and domain information

>KOG3738\|consensus	Back alignment and domain information

>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily	Back alignment and domain information

>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>PLN02893 Cellulose synthase-like protein	Back alignment and domain information

>KOG3737\|consensus	Back alignment and domain information

>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A	Back alignment and domain information

>TIGR01762 chlorin-enz chlorinating enzymes	Back alignment and domain information

>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

>KOG3588\|consensus	Back alignment and domain information

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>PLN03181 glycosyltransferase; Provisional	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	Back alignment and domain information

>KOG3916\|consensus	Back alignment and domain information

>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline	Back alignment and domain information

>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B	Back alignment and domain information

>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional	Back alignment and domain information

>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		734
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 65.3 bits (158), Expect = 5e-11
 Identities = 69/457 (15%), Positives = 141/457 (30%), Gaps = 144/457 (31%)

Query: 34  FLVITVASNETDGYKRFIQSAE-------VNKLQVKTLGLHQPWLGGDM-----SSLGGG 81
            L  T+ S + +  ++F++          ++ ++ +     QP +   M       L   
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR---QPSMMTRMYIEQRDRLYND 122

Query: 82  ------YKVN------LLKNELDEMDITDDMII----------LVTD---SYDVI--IDG 114
                 Y V+       L+  L E+    +++I          +  D   SY V   +D 
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182

Query: 115 GV-----------NDILERFNTFDANIVFGAERLCWPDTSLYDKYPAVGSGYRYLNSGGF 163
            +             +LE               L +     +       S  +       
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQK-----------LLYQIDPNWTSRSDHSSNIKLR----- 226

Query: 164 IGYAKD-IKELISNRSIKNEEDDQLYYALLFLD-----ETLR-----------TKHKIVL 206
           I   +  ++ L+ ++  +N         LL L      +              T+ K V 
Sbjct: 227 IHSIQAELRRLLKSKPYEN--------CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 207 DTLANLFQNLYGSLEDIKLNFDLDE----FVHLTNTKYN--------TNPVIIHGNGKSK 254
           D L+        SL+   +    DE     +   + +          TNP  +    +S 
Sbjct: 279 DFLSAATTTHI-SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337

Query: 255 IELNSFGNYLAKSWKTSGCTRCN-LIKH-LDSLKPDQ----------FP-------SVLI 295
            +  +  +     WK   C +   +I+  L+ L+P +          FP        +L 
Sbjct: 338 RDGLATWDN----WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS 393

Query: 296 SVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYNNQEYHAPLFDDYIHNFKTMFKNVKYI 355
            ++ D   + +   +NK+          S+     +E    +   Y+   K   +N   +
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKY-------SLVEKQPKESTISIPSIYLE-LKVKLENEYAL 445

Query: 356 AHNSTVNS-KEARNLAVENSLHKGVDFYFYVDSDSHL 391
            H S V+     +    ++ +   +D YFY    SH+
Sbjct: 446 -HRSIVDHYNIPKTFDSDDLIPPYLDQYFY----SHI 477

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		734
3bcv_A		240	Putative glycosyltransferase protein; protein stru	99.73
1qg8_A		255	Protein (spore coat polysaccharide biosynthesis P	99.65
1xhb_A		472	Polypeptide N-acetylgalactosaminyltransferase 1; g	99.64
2d7i_A		570	Polypeptide N-acetylgalactosaminyltransferase 10;	99.62
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.59
3dkq_A		243	PKHD-type hydroxylase SBAL_3634; putative oxygenas	99.56
4fix_A		657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	99.56
2ffu_A		501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	99.55
3itq_A		216	Prolyl 4-hydroxylase, alpha subunit domain protei;	99.55
4hg6_A		802	Cellulose synthase subunit A; membrane translocati	99.47
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.42
2jig_A		224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	99.42
3l7i_A		729	Teichoic acid biosynthesis protein F; GT-B fold, m	99.35
3ckj_A		329	Putative uncharacterized protein; mycobacteria, un	99.35
3f1y_A		387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	99.25
2fy7_A		287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	99.07
2nxv_A		249	ATP synthase subunits region ORF 6; majastridin, A	99.02
2hbt_A		247	EGL nine homolog 1; prolyl hydroxylase, hypoxia in	98.7
2bo4_A		397	Mannosylglycerate synthase; catalysis, glycosyltra	98.58
2wvl_A		391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	98.55
2c0n_A		203	A197; thermophil protein, thermophilic virus, STIV	98.36
2zu9_A		394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	97.69
2rg4_A		216	Uncharacterized protein; rhodobacterales, oceanico	97.04
1fo8_A		343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	97.03
3kt7_A		633	PKHD-type hydroxylase TPA1; double-stranded beta h	96.92
3lw6_A		287	FI08434P, beta-4-galactosyltransferase 7; protein-	96.44
2a1x_A		308	Phytanoyl-COA dioxygenase; beta jelly roll, double	95.98
2rdq_A		288	1-deoxypentalenic acid 11-beta hydroxylase; Fe(II	95.2
2opw_A		291	Phyhd1 protein; double-stranded beta helix, oxygen	94.46
2fct_A		313	Syringomycin biosynthesis enzyme 2; mononuclear ir	94.21
3nnf_A		344	CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependen	94.17
3emr_A		310	ECTD; double stranded beta helix, oxidoreductase;	93.88
3gja_A		319	CYTC3; halogenase, beta barrel, biosynthetic prote	93.8
3tzt_A		276	Glycosyl transferase family 8; structural genomics	93.53
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	89.6
3s57_A		204	Alpha-ketoglutarate-dependent dioxygenase ALKB HO;	88.86

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}	Back alignment and structure

Probab=99.73  E-value=1.2e-16  Score=161.25  Aligned_cols=211  Identities=12%  Similarity=0.141  Sum_probs=135.5

Q ss_pred             CCCcEEEEEEecCChhHHHHHHHHHHcccCCCceEEEEEec-CCCCcHHHHHHHHHHhccCcceEEEEeCCCCCcHHHHH
Q psy14856        289 QFPSVLISVFIDKPTAFLEEFLNKIANLNYPAKKISMFVYN-NQEYHAPLFDDYIHNFKTMFKNVKYIAHNSTVNSKEAR  367 (734)
Q Consensus       289 ~~P~V~I~I~i~n~~~~L~~fL~sL~~LdYPk~ri~l~I~n-s~D~t~~il~~f~~~~~~~y~~V~ii~~~~~~g~a~ar  367 (734)
                      ..|+|+|+||+||++.+|+++|+||.+|+||+.+|. +|+| |+|.|.++++++.++.    +.|+++. .++.|.+.||
T Consensus         3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiI-vvDd~S~d~t~~~~~~~~~~~----~~i~~i~-~~n~G~~~a~   76 (240)
T 3bcv_A            3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEII-LIDDESPDNCPKICDDYAAQY----PNIKVIH-KKNAGLGMAC   76 (240)
T ss_dssp             CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEE-EEECCCSSSHHHHHHHHHHHC----SSEEEEE-CCCCCHHHHH
T ss_pred             CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEE-EEECCCCcCHHHHHHHHHhhC----CCEEEEE-CCCCChHHHH
Confidence            469999999999999999999999999999986663 3444 9999999999988764    5788887 5699999999


Q ss_pred             HHHHHhhhhcCccEEEEECCCccCCChHHHHHHHHc----CCceeeecc---cCCCcccccccccccCCccccchHHHHH
Q psy14856        368 NLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVNR----NESLIAPLL---VRPFKAWSNFWGALNADGFYARSFDYMN  440 (734)
Q Consensus       368 N~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~~----nk~IVaP~l---~~~~~~wsNFWgal~~~GyY~Rsedy~~  440 (734)
                      |.|++.|   ++||++|+|+|.++. |+.|+.|++.    +..++..-.   ...+.....+........+|.+ .....
T Consensus        77 N~g~~~a---~g~~i~~lD~Dd~~~-~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  151 (240)
T 3bcv_A           77 NSGLDVA---TGEYVAFCDSDDYVD-SDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNK-NEIHT  151 (240)
T ss_dssp             HHHHHHC---CSSEEEECCTTCCCC-TTHHHHHHHHHHHHTCSEEEC--------------------CEEECSH-HHHHH
T ss_pred             HHHHHHc---CCCEEEEECCCCcCC-HHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCH-HHHHH
Confidence            9999986   689999999999997 9999999862    445553311   1111100000000001122222 22222


Q ss_pred             HHhcccCCcce-------eeeceeeeEEeeehhhHhhcccccccccC--CCchhHHHHHHHHHcCeeEEEecccceEEee
Q psy14856        441 IINGDQGGKGI-------WNVPYITNCYLMKTSVIKATNIKTIYTLN--SMDYDMAFCTNLRNKGIHLKIDSTQEYGHLV  511 (734)
Q Consensus       441 i~~~~~~~~G~-------~nVP~v~~~~LI~~~vL~~~~~~~~f~~~--~~deDm~Fc~~ar~~Gi~myv~N~~~~G~l~  511 (734)
                      .... .  .+.       ...+...++.+++++++++ .+ ..|...  ...||..||.++..+|..+.+.+...|-|-.
T Consensus       152 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~rr~~~~~-~g-~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~yr~  226 (240)
T 3bcv_A          152 LLKD-L--IASDPYAREERAIQVSAKVVLYRRNLIEK-KH-LRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYNYRT  226 (240)
T ss_dssp             HHGG-G--TSSCHHHHHHHHHHHTCSCEEEEHHHHHH-TT-CCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--------
T ss_pred             HHHH-H--hhcchhhccccccccchhheeeeHHHHHH-cC-CccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEEEEe
Confidence            2211 1  110       0011224578999999997 32 135533  3579999999999999999999988887776


Q ss_pred             ccCC
Q psy14856        512 DSEN  515 (734)
Q Consensus       512 ~~~~  515 (734)
                      ...+
T Consensus       227 ~~~~  230 (240)
T 3bcv_A          227 NPIS  230 (240)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            6655

PyMOL of 3bcv

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*	Back alignment and structure

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17	Back alignment and structure

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}	Back alignment and structure

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*	Back alignment and structure

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*	Back alignment and structure

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}	Back alignment and structure

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A	Back alignment and structure

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*	Back alignment and structure

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A	Back alignment and structure

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*	Back alignment and structure

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...	Back alignment and structure

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*	Back alignment and structure

>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*	Back alignment and structure

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*	Back alignment and structure

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*	Back alignment and structure

>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}	Back alignment and structure

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*	Back alignment and structure

>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A	Back alignment and structure

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*	Back alignment and structure

>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A	Back alignment and structure

>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}	Back alignment and structure

>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9	Back alignment and structure

>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*	Back alignment and structure

>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*	Back alignment and structure

>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A	Back alignment and structure

>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}	Back alignment and structure

>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*	Back alignment and structure

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0	Back alignment and structure

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*	Back alignment and structure

>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		734
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.77
d1qg8a_		255	Spore coat polysaccharide biosynthesis protein Sps	99.56
d1omza_		265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	99.24
d2bo4a1		381	Mannosylglycerate synthase, MGS {Rhodothermus mari	98.26
d1pzta_		271	beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos	96.54
d2a1xa1		296	Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapie	96.43
d2fcta1		308	Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudom	95.45
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	94.39
d2iuwa1		210	AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]	89.06
d1o7qa_		287	alpha-1,3-galactosyltransferase catalytic domain {	84.73
d2fdia1		200	Alkylated DNA repair protein AlkB {Escherichia col	83.28
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	81.38
d1fo8a_		343	N-acetylglucosaminyltransferase I {Rabbit (Oryctol	80.65
d1lzia_		283	Glycosyltransferase A catalytic domain {Human (Hom	80.62

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2e-18  Score=181.31  Aligned_cols=214  Identities=14%  Similarity=0.182  Sum_probs=148.7

Q ss_pred             CCCCcEEEEEEecCCh-hHHHHHHHHHHcccCCCceEEE-EEec-CCCCcH-HHHHHHHHHhccCcceEEEEeCCCCCcH
Q psy14856        288 DQFPSVLISVFIDKPT-AFLEEFLNKIANLNYPAKKISM-FVYN-NQEYHA-PLFDDYIHNFKTMFKNVKYIAHNSTVNS  363 (734)
Q Consensus       288 ~~~P~V~I~I~i~n~~-~~L~~fL~sL~~LdYPk~ri~l-~I~n-s~D~t~-~il~~f~~~~~~~y~~V~ii~~~~~~g~  363 (734)
                      +..|+|||+||+||++ .+|.++|+||+++.||+...+| +|+| |+|.|. ++++++.++..   ..|+++..+++.|.
T Consensus        19 ~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~---~~i~vi~~~~n~G~   95 (328)
T d1xhba2          19 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK---VPVHVIRMEQRSGL   95 (328)
T ss_dssp             SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS---SCEEEEECSSCCCH
T ss_pred             CCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcC---CCeEEEEecccccc
Confidence            4579999999999985 6899999999999999875454 4444 888875 66777776543   46999999999999


Q ss_pred             HHHHHHHHHhhhhcCccEEEEECCCccCCChHHHHHHHH----cCCceeeecccC-CCcc------cccccccccC---C
Q psy14856        364 KEARNLAVENSLHKGVDFYFYVDSDSHLDNPDVLKYLVN----RNESLIAPLLVR-PFKA------WSNFWGALNA---D  429 (734)
Q Consensus       364 a~arN~al~~a~~~~~DYlf~vDAD~~L~np~tL~~LI~----~nk~IVaP~l~~-~~~~------wsNFWgal~~---~  429 (734)
                      +.|||.|++.|   ++||++|+|+|++++ |++|+.|++    ....+++|.+.. .+.-      +...++....   .
T Consensus        96 ~~a~N~Gi~~a---~gd~i~flD~D~~~~-p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  171 (328)
T d1xhba2          96 IRARLKGAAVS---RGQVITFLDAHCECT-AGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNF  171 (328)
T ss_dssp             HHHHHHHHHHC---CSSEEEEEESSEEEC-TTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCE
T ss_pred             hHHHHHHHHhh---hcceeeecCcccccC-hhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccc
Confidence            99999999886   699999999999997 999999875    345566664311 0000      0000111100   0


Q ss_pred             ccccchHHHHHHHhcccCCcceeeeceee-eEEeeehhhHhhcccccccccCC--C-chhHHHHHHHHHcCeeEEEeccc
Q psy14856        430 GFYARSFDYMNIINGDQGGKGIWNVPYIT-NCYLMKTSVIKATNIKTIYTLNS--M-DYDMAFCTNLRNKGIHLKIDSTQ  505 (734)
Q Consensus       430 GyY~Rsedy~~i~~~~~~~~G~~nVP~v~-~~~LI~~~vL~~~~~~~~f~~~~--~-deDm~Fc~~ar~~Gi~myv~N~~  505 (734)
                      ..+..............  .....+|++. +|++|+|+++.+ .+  .|+...  + .||++||.+++++|..+++.+..
T Consensus       172 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~irr~~f~~-vG--gfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~  246 (328)
T d1xhba2         172 RWYPVPQREMDRRKGDR--TLPVRTPTMAGGLFSIDRDYFQE-IG--TYDAGMDIWGGENLEISFRIWQCGGTLEIVTCS  246 (328)
T ss_dssp             EEEECCHHHHHHTTTCT--TSCEECSBCCSSSEEEEHHHHHH-TT--SCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEE
T ss_pred             cccccchhhhhcccccc--ccccccceecceeeeeeHHHHHH-hC--CCCCCCcCcCchHHHHHHHHHHhCCeEEEeCCe
Confidence            11111122222222222  4445667665 577899999998 43  355322  2 59999999999999999999998


Q ss_pred             ceEEeecc
Q psy14856        506 EYGHLVDS  513 (734)
Q Consensus       506 ~~G~l~~~  513 (734)
                      ..+|+-..
T Consensus       247 ~v~H~~~~  254 (328)
T d1xhba2         247 HVGHVFRK  254 (328)
T ss_dssp             EEEEEC--
T ss_pred             EEEEeCCC
Confidence            99997543

PyMOL of d1xhba2

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}	Back information, alignment and structure

>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2fcta1 b.82.2.9 (A:3-310) Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudomonas syringae pv. syringae [TaxId: 321]}	Back information, alignment and structure

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure