Psyllid ID: psy14895

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRGPAGAQPVAGDTPTNPPGVDAPPASRTRAGGTNGEGESPQHPPTKSYHSPAVISSNNKPVPNIVPRVLAPNAASRPFVDYRGSGGGEERGGGGGDSSRMWKKPIIPPPVPEPENKFYFPPSAPNAASRPFVDYRGSGGGEERGGGGGDSSRMWKKPIIPPPVPEPENKLGKVTVFKRVV
Secondary Structure (PSIPRED)
ccccHHHHHccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
HHccHHHHccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHcccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEc
Coil and Loop (DISEMBL)
mstpieelckgypgefptflLYSRslrfeekpdysytRQLFRNLFhrkgftydyvfdwnmlkfggsrgpagaqpvgrkiksyDYVFDwnmlkfggsrgpagaqpvagdtptnppgvdappasrtraggtngegespqhpptksyhspavissnnkpvpnivprvlapnaasrpfvdyrgsgggeergggggdssrmwkkpiipppvpepenkfyfppsapnaasrpfvdyrgsgggeergggggdssrmwkkpiipppvpepenklgkvtvfkrvv
Flexible Loop (DISEMBL)
mstpieelckgypgefPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRGPAGAQPVAGDTPTNPPGVDAPPASRTRAGGTNGEGESPQHPPTKSYHSPAVISSNNKPVPNIVPrvlapnaasrpfvdyrgsgggeergggggdssrmwKKPIIPPPVPEPENKFYFPPSAPNAASRPFVDYRGSGGGEergggggdssrmWKKPiipppvpepenklgkvtvfkrvv
Low Complexity Region (SEG)
MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRGPAGAQPVAGDTPTNPPGVDAPPASRTRAGGTNGEGESPQHPPTKSYHSPAVISSNNKPVPNIVPRVLAPNAASRPFVDYrgsgggeergggggdssrMWKKpiipppvpepeNKFYFPPSAPNAASRPFVDYrgsgggeergggggdssrMWKKpiipppvpepeNKLGKVTVFKRVV
Disordered region (IsUnstruct)
*******LCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFG**************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
*STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM*************************************************************************************************************************************************************************************************************LGKVTVFKRVV
Disordered Region (DISEMBL)
MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRGPAGAQPVAGDTPTNPPGVDAPPA*************************PAVISSNNKPVPNIVPRVLAPNAASRPFVDYRGSG************SRMWKKPIIPPPVPEPENKFYFPPSAPNAASRPFVDYRGSG************SRMWKKPIIPPPVPEPENKLGKVTVFKRVV
Disordered Region (DISPRO)
*STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGS**************************************************************************************************************************************************************************************MWKKPIIPPPVPEPENKLGKVTVFKRVV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRGPAGAQPVAGDTPTNPPGVDAPPASRTRAGGTNGEGESPQHPPTKSYHSPAVISSNNKPVPNIVPRVLAPNAASRPFVDYRGSGGGEERGGGGGDSSRMWKKPIIPPPVPEPENKFYFPPSAPNAASRPFVDYRGSGGGEERGGGGGDSSRMWKKPIIPPPVPEPENKLGKVTVFKRVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	276	2.2.26 [Sep-21-2011]
Q9JMK2	416	Casein kinase I isoform e	yes	N/A	0.25	0.165	0.782	4e-29
P49674	416	Casein kinase I isoform e	yes	N/A	0.25	0.165	0.782	5e-29
Q5ZLL1	416	Casein kinase I isoform e	no	N/A	0.25	0.165	0.782	6e-29
Q5BP74	415	Casein kinase I isoform d	N/A	N/A	0.239	0.159	0.803	3e-28
Q6P3K7	409	Casein kinase I isoform d	yes	N/A	0.242	0.163	0.791	4e-28
Q06486	415	Casein kinase I isoform d	no	N/A	0.239	0.159	0.803	4e-28
Q9DC28	415	Casein kinase I isoform d	no	N/A	0.239	0.159	0.803	4e-28
P48730	415	Casein kinase I isoform d	no	N/A	0.239	0.159	0.803	4e-28
P35508	415	Casein kinase I isoform d	yes	N/A	0.239	0.159	0.803	4e-28
Q7T2E3	403	Casein kinase I isoform d	no	N/A	0.239	0.163	0.803	5e-28

>sp|Q9JMK2|KC1E_MOUSE Casein kinase I isoform epsilon OS=Mus musculus GN=Csnk1e PE=1 SV=2

 Score =  128 bits (322), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 61/69 (88%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGP 69
           LKFG +R P
Sbjct: 293 LKFGAARNP 301

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates DVL1. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2. Retains PER1 in the cytoplasm. Inhibits cytokine-induced granuloytic differentiation.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|P49674|KC1E_HUMAN Casein kinase I isoform epsilon OS=Homo sapiens GN=CSNK1E PE=1 SV=1

 Score =  128 bits (321), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 61/69 (88%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGP 69
           LKFG +R P
Sbjct: 293 LKFGAARNP 301

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates DVL1. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2. Retains PER1 in the cytoplasm. Inhibits cytokine-induced granuloytic differentiation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5ZLL1|KC1E_CHICK Casein kinase I isoform epsilon OS=Gallus gallus GN=CSNK1E PE=2 SV=2

 Score =  128 bits (321), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 61/69 (88%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGP 69
           LKFG +R P
Sbjct: 293 LKFGAARNP 301

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates DVL1. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2. Retains PER1 in the cytoplasm.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5BP74|KC1D_XENLA Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2

 Score =  125 bits (314), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 59/66 (89%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGS 66
           LKFG S
Sbjct: 293 LKFGAS 298

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Isoform 1 can phosphorylate a large number of proteins. Isoform 2 has no kinase activity. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6P3K7|KC1DB_DANRE Casein kinase I isoform delta-B OS=Danio rerio GN=csnk1db PE=2 SV=1

 Score =  125 bits (313), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 60/67 (89%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSR 67
           LKFG +R
Sbjct: 293 LKFGANR 299

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q06486|KC1D_RAT Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2

 Score =  125 bits (313), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 59/66 (89%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGS 66
           LKFG S
Sbjct: 293 LKFGAS 298

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q9DC28|KC1D_MOUSE Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2

 Score =  125 bits (313), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 59/66 (89%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGS 66
           LKFG S
Sbjct: 293 LKFGAS 298

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|P48730|KC1D_HUMAN Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2

 Score =  125 bits (313), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 59/66 (89%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGS 66
           LKFG S
Sbjct: 293 LKFGAS 298

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|P35508|KC1D_BOVIN Casein kinase I isoform delta OS=Bos taurus GN=CSNK1D PE=2 SV=2

 Score =  125 bits (313), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 59/66 (89%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGS 66
           LKFG S
Sbjct: 293 LKFGAS 298

Essential serine/threonine-protein kinase that regulates diverse cellular growth and survival processes including Wnt signaling, DNA repair and circadian rhythms. It can phosphorylate a large number of proteins. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Phosphorylates connexin-43/GJA1, MAP1A, SNAPIN, MAPT/TAU, TOP2A, DCK, HIF1A, EIF6, p53/TP53, DVL2, DVL3, ESR1, AIB1/NCOA3, DNMT1, PKD2, YAP1, PER1 and PER2. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2, leading to retain PER1 in the cytoplasm. YAP1 phosphorylation promotes its SCF(beta-TRCP) E3 ubiquitin ligase-mediated ubiquitination and subsequent degradation. DNMT1 phosphorylation reduces its DNA-binding activity. Phosphorylation of ESR1 and AIB1/NCOA3 stimulates their activity and coactivation. Phosphorylation of DVL2 and DVL3 regulates WNT3A signaling pathway that controls neurite outgrowth. EIF6 phosphorylation promotes its nuclear export. Triggers down-regulation of dopamine receptors in the forebrain. Activates DCK in vitro by phosphorylation. TOP2A phosphorylation favors DNA cleavable complex formation. May regulate the formation of the mitotic spindle apparatus in extravillous trophoblast. Modulates connexin-43/GJA1 gap junction assembly by phosphorylation. Probably involved in lymphocyte physiology. Regulates fast synaptic transmission mediated by glutamate.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q7T2E3|KC1DA_DANRE Casein kinase I isoform delta-A OS=Danio rerio GN=csnk1da PE=2 SV=1

 Score =  125 bits (313), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 60/66 (90%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGS 66
           LKFGG+
Sbjct: 293 LKFGGA 298

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
270011709	471	hypothetical protein TcasGA2_TC005777 [T	0.554	0.324	0.467	3e-30
149065932	506	casein kinase 1, epsilon, isoform CRA_c	0.615	0.335	0.430	2e-28
13122442	506	casein kinase1 epsilon-2 [Rattus norvegi	0.615	0.335	0.430	2e-28
363740672	415	PREDICTED: uncharacterized protein LOC41	0.260	0.173	0.777	6e-28
326930755	415	PREDICTED: casein kinase I isoform delta	0.260	0.173	0.777	7e-28
395819774	416	PREDICTED: casein kinase I isoform epsil	0.25	0.165	0.797	2e-27
427780883	517	Putative casein kinase 1 delta b [Rhipic	0.489	0.261	0.513	2e-27
149065930	337	casein kinase 1, epsilon, isoform CRA_a	0.25	0.204	0.782	2e-27
32810636	416	casein kinase 1 epsilon [Gallus gallus]	0.25	0.165	0.782	2e-27
148225112	416	casein kinase 1, epsilon [Xenopus laevis	0.25	0.165	0.782	2e-27

>gi|270011709|gb|EFA08157.1| hypothetical protein TcasGA2_TC005777 [Tribolium castaneum]

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 97/171 (56%), Gaps = 18/171 (10%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MST IEELCKG+P EFPT+L Y R LRFEE+PDYSY RQLFR+LFHR+GFTYDYVFDWNM
Sbjct: 233 MSTSIEELCKGFPMEFPTYLNYCRQLRFEERPDYSYLRQLFRSLFHRQGFTYDYVFDWNM 292

Query: 61  LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRGPAGAQPVAGDTPTNPPGVDAPP 120
           LKFGGSRG    +  GR                 G+R  + A      TPT P      P
Sbjct: 293 LKFGGSRGSHCEENTGR----------------SGTRYGSHAATPGDSTPTAPQSRTRRP 336

Query: 121 ASRTRAGGTNGEGESPQHPPTKSYHSPAVISSNNKPVPNIVPRVLAPNAAS 171
             R      N    +P      S +SP +  S+ + V ++  R  APNA++
Sbjct: 337 HDRMDIVPANSAAPNPLEDVISS-NSPRLYDSHERRV-SMRLRQGAPNAST 385

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|149065932|gb|EDM15805.1| casein kinase 1, epsilon, isoform CRA_c [Rattus norvegicus]

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/186 (43%), Positives = 105/186 (56%), Gaps = 16/186 (8%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-----PAGAQPVAGDTPTNPPG 115
           LKFG +R P   + V R+ + ++       L+   +R      P GA      +   P  
Sbjct: 293 LKFGAARNP---EDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEP-- 347

Query: 116 VDAPPASRTRAGGTNG----EGESPQHPPTKSYH--SPAVISSNNKPVPNIVPRVLAPNA 169
           V + PASR +  G            +   +   H  +PA +SS++      V R+ A  A
Sbjct: 348 VASTPASRIQQAGNTSPRAISRADRERKVSMRLHRGAPANVSSSDLTGRQEVSRIAASQA 407

Query: 170 ASRPFV 175
           A+ P V
Sbjct: 408 ANTPLV 413

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|13122442|dbj|BAB32922.1| casein kinase1 epsilon-2 [Rattus norvegicus]

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/186 (43%), Positives = 105/186 (56%), Gaps = 16/186 (8%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-----PAGAQPVAGDTPTNPPG 115
           LKFG +R P   + V R+ + ++       L+   +R      P GA      +   P  
Sbjct: 293 LKFGAARNP---EDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEP-- 347

Query: 116 VDAPPASRTRAGGTNG----EGESPQHPPTKSYH--SPAVISSNNKPVPNIVPRVLAPNA 169
           V + PASR +  G            +   +   H  +PA +SS++      V R+ A  A
Sbjct: 348 VASTPASRIQQAGNTSPRAISRADRERKVSMRLHRGAPANVSSSDLTGRQEVSRIAASQA 407

Query: 170 ASRPFV 175
           A+ P V
Sbjct: 408 ANTPLV 413

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|363740672|ref|XP_415634.3| PREDICTED: uncharacterized protein LOC417378 [Gallus gallus]

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 62/72 (86%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGPAGA 72
           LKFG SRG   A
Sbjct: 293 LKFGASRGAEDA 304

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326930755|ref|XP_003211507.1| PREDICTED: casein kinase I isoform delta-like [Meleagris gallopavo]

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 62/72 (86%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGPAGA 72
           LKFG SRG   A
Sbjct: 293 LKFGASRGAEDA 304

Source: Meleagris gallopavo

Species: Meleagris gallopavo

Genus: Meleagris

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395819774|ref|XP_003783254.1| PREDICTED: casein kinase I isoform epsilon [Otolemur garnettii]

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 61/69 (88%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGP 69
           LKFG SR P
Sbjct: 293 LKFGASRNP 301

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427780883|gb|JAA55893.1| Putative casein kinase 1 delta b [Rhipicephalus pulchellus]

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/152 (51%), Positives = 85/152 (55%), Gaps = 17/152 (11%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIEELC+ +P EF T+L Y RSLRF+EKPDYSY RQL RNLFHR+GFTYDYVFDWNM
Sbjct: 345 MSTPIEELCRSFPSEFATYLNYCRSLRFDEKPDYSYLRQLLRNLFHRQGFTYDYVFDWNM 404

Query: 61  LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRGPAGAQPVA--------GDTPTN 112
           LKFGG+R  AG             V        GG R   GAQ           G  PT 
Sbjct: 405 LKFGGNRSQAGGAE-----AGATGVVGAEGGPEGGHRAQGGAQQAHHASTAASRGLPPTT 459

Query: 113 PPGVDAPPASRTRAGGTNGEGE----SPQHPP 140
             G   PP   T   G NGE      SP +PP
Sbjct: 460 ASGSQRPPYRGTFLTGMNGEQHGMPASPPYPP 491

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|149065930|gb|EDM15803.1| casein kinase 1, epsilon, isoform CRA_a [Rattus norvegicus]

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 61/69 (88%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 154 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 213

Query: 61  LKFGGSRGP 69
           LKFG +R P
Sbjct: 214 LKFGAARNP 222

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|32810636|gb|AAP87440.1| casein kinase 1 epsilon [Gallus gallus]

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 61/69 (88%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGP 69
           LKFG +R P
Sbjct: 293 LKFGAARNP 301

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148225112|ref|NP_001084228.1| casein kinase 1, epsilon [Xenopus laevis] gi|6007766|gb|AAF01032.1|AF183394_1 casein kinase I epsilon [Xenopus laevis] gi|66910698|gb|AAH97547.1| CKIe protein [Xenopus laevis]

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 61/69 (88%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSRGP 69
           LKFG +R P
Sbjct: 293 LKFGAARNP 301

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
UNIPROTKB|Q99PS2	506	Csnk1e "Protein Csnk1e" [Rattu	0.615	0.335	0.456	1.7e-31
RGD|62045	416	Csnk1e "casein kinase 1, epsil	0.608	0.403	0.454	3.8e-30
UNIPROTKB|E2RA09	416	CSNK1E "Uncharacterized protei	0.608	0.403	0.448	4.9e-30
UNIPROTKB|F1SKP7	416	CSNK1E "Uncharacterized protei	0.608	0.403	0.448	4.9e-30
UNIPROTKB|P49674	416	CSNK1E "Casein kinase I isofor	0.608	0.403	0.448	6.2e-30
MGI|MGI:1351660	416	Csnk1e "casein kinase 1, epsil	0.608	0.403	0.454	7.9e-30
UNIPROTKB|F1NLW5	228	CSNK1E "Casein kinase I isofor	0.608	0.736	0.443	1e-29
UNIPROTKB|F1NMG6	226	CSNK1E "Casein kinase I isofor	0.608	0.743	0.443	1e-29
UNIPROTKB|Q5ZLL1	416	CSNK1E "Casein kinase I isofor	0.608	0.403	0.443	1e-29
UNIPROTKB|E1BVV7	411	CSNK1D "Uncharacterized protei	0.460	0.309	0.538	7.1e-29

UNIPROTKB|Q99PS2 Csnk1e "Protein Csnk1e" [Rattus norvegicus (taxid:10116)]

 Score = 346 (126.9 bits), Expect = 1.7e-31, P = 1.7e-31
 Identities = 85/186 (45%), Positives = 107/186 (57%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:   233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + V R+ + ++       L+   +R  P G  P  G T         P
Sbjct:   293 LKFGAARNP---EDVDRERREHEREERMGQLRGSATRALPPG--PPTGATANRLRSAAEP 347

Query:   120 ----PASRTR-AGGTNGEGESPQHPPTK---SYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 PASR + AG T+    S      K     H  +PA +SS++      V R+ A  A
Sbjct:   348 VASTPASRIQQAGNTSPRAISRADRERKVSMRLHRGAPANVSSSDLTGRQEVSRIAASQA 407

Query:   170 ASRPFV 175
             A+ P V
Sbjct:   408 ANTPLV 413

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

RGD|62045 Csnk1e "casein kinase 1, epsilon" [Rattus norvegicus (taxid:10116)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 84/185 (45%), Positives = 106/185 (57%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:   233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + V R+ + ++       L+   +R  P G  P  G T         P
Sbjct:   293 LKFGAARNP---EDVDRERREHEREERMGQLRGSATRALPPG--PPTGATANRLRSAAEP 347

Query:   120 ----PASRTR-AGGTNGEGESPQHPPTK---SYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 PASR + AG T+    S      K     H  +PA +SS++      V R+ A + 
Sbjct:   348 VASTPASRIQQAGNTSPRAISRADRERKVSMRLHRGAPANVSSSDLTGRQEVSRIAA-SQ 406

Query:   170 ASRPF 174
              S PF
Sbjct:   407 TSVPF 411

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA;ISO

GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA;ISO

GO:0034613 "cellular protein localization" evidence=IEA;ISO

GO:0042752 "regulation of circadian rhythm" evidence=NAS

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA;ISO

UNIPROTKB|E2RA09 CSNK1E "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 83/185 (44%), Positives = 107/185 (57%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:   233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + V R+ + ++       L+   +R  P G  P  G T         P
Sbjct:   293 LKFGAARNP---EDVDRERREHEREERMGQLRGSATRALPPG--PPTGATANRLRSAAEP 347

Query:   120 ----PASRTR-AGGTNGEGESP---QHPPTKSYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 PASR + AG T+    S    +   +   H  +PA +SS++      V R+ A + 
Sbjct:   348 TASTPASRIQQAGNTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISA-SQ 406

Query:   170 ASRPF 174
              S PF
Sbjct:   407 TSVPF 411

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1SKP7 CSNK1E "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 83/185 (44%), Positives = 107/185 (57%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:   233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + V R+ + ++       L+   +R  P G  P  G T         P
Sbjct:   293 LKFGAARNP---EDVDRERREHEREERMGQLRGSATRALPPG--PPTGATANRLRSAAEP 347

Query:   120 ----PASRTR-AGGTNGEGESP---QHPPTKSYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 PASR + AG T+    S    +   +   H  +PA +SS++      V R+ A + 
Sbjct:   348 VASTPASRLQQAGNTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISA-SQ 406

Query:   170 ASRPF 174
              S PF
Sbjct:   407 TSVPF 411

GO:0005634 "nucleus" evidence=IEA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0034613 "cellular protein localization" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|P49674 CSNK1E "Casein kinase I isoform epsilon" [Homo sapiens (taxid:9606)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 83/185 (44%), Positives = 107/185 (57%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:   233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + V R+ + ++       L+   +R  P G  P  G T         P
Sbjct:   293 LKFGAARNP---EDVDRERREHEREERMGQLRGSATRALPPG--PPTGATANRLRSAAEP 347

Query:   120 ----PASRTR-AGGTNGEGESP---QHPPTKSYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 PASR + AG T+    S    +   +   H  +PA +SS++      V R+ A + 
Sbjct:   348 VASTPASRIQPAGNTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRIPA-SQ 406

Query:   170 ASRPF 174
              S PF
Sbjct:   407 TSVPF 411

GO:0005524 "ATP binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0034613 "cellular protein localization" evidence=IEA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=TAS

GO:0004672 "protein kinase activity" evidence=ISS

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0006281 "DNA repair" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

MGI|MGI:1351660 Csnk1e "casein kinase 1, epsilon" [Mus musculus (taxid:10090)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 84/185 (45%), Positives = 105/185 (56%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:   233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + V R+ + ++       L+   +R  P G  P  G T         P
Sbjct:   293 LKFGAARNP---EDVDRERREHEREERMGQLRGSATRALPPG--PPTGATANRLRSAAEP 347

Query:   120 ----PASRTR-AGGTNGEGESPQHPPTK---SYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 PASR +  G T+    S      K     H  +PA +SS++      V R LA + 
Sbjct:   348 VASTPASRIQQTGNTSPRAISRADRERKVSMRLHRGAPANVSSSDLTGRQEVSR-LAASQ 406

Query:   170 ASRPF 174
              S PF
Sbjct:   407 TSVPF 411

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0007623 "circadian rhythm" evidence=TAS

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IGI

GO:0030529 "ribonucleoprotein complex" evidence=IDA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IMP

GO:0034613 "cellular protein localization" evidence=IDA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IGI

UNIPROTKB|F1NLW5 CSNK1E "Casein kinase I isoform epsilon" [Gallus gallus (taxid:9031)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 82/185 (44%), Positives = 108/185 (58%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:    45 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 104

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + + R+ + ++       L+   +R  P G  P AG T      V  P
Sbjct:   105 LKFGAARNP---EDMDRERREHEREERMGQLRGSATRALPPG--PPAGATGNRLRNVAEP 159

Query:   120 ----PASRTR-AGGTNGEGESP---QHPPTKSYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 P SR + +G T+    S    +   +   H  +PA +SS++      V R+ A + 
Sbjct:   160 MASTPTSRIQQSGNTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISA-SQ 218

Query:   170 ASRPF 174
              S PF
Sbjct:   219 TSVPF 223

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|F1NMG6 CSNK1E "Casein kinase I isoform epsilon" [Gallus gallus (taxid:9031)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 82/185 (44%), Positives = 108/185 (58%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:    45 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 104

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + + R+ + ++       L+   +R  P G  P AG T      V  P
Sbjct:   105 LKFGAARNP---EDMDRERREHEREERMGQLRGSATRALPPG--PPAGATGNRLRNVAEP 159

Query:   120 ----PASRTR-AGGTNGEGESP---QHPPTKSYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 P SR + +G T+    S    +   +   H  +PA +SS++      V R+ A + 
Sbjct:   160 MASTPTSRIQQSGNTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISA-SQ 218

Query:   170 ASRPF 174
              S PF
Sbjct:   219 TSVPF 223

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q5ZLL1 CSNK1E "Casein kinase I isoform epsilon" [Gallus gallus (taxid:9031)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 82/185 (44%), Positives = 108/185 (58%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:   233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query:    61 LKFGGSRGPAGAQPVGRKIKSYDYVFDWNMLKFGGSRG-PAGAQPVAGDTPTNPPGVDAP 119
             LKFG +R P   + + R+ + ++       L+   +R  P G  P AG T      V  P
Sbjct:   293 LKFGAARNP---EDMDRERREHEREERMGQLRGSATRALPPG--PPAGATGNRLRNVAEP 347

Query:   120 ----PASRTR-AGGTNGEGESP---QHPPTKSYH--SPAVISSNNKPVPNIVPRVLAPNA 169
                 P SR + +G T+    S    +   +   H  +PA +SS++      V R+ A + 
Sbjct:   348 MASTPTSRIQQSGNTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISA-SQ 406

Query:   170 ASRPF 174
              S PF
Sbjct:   407 TSVPF 411

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0004672 "protein kinase activity" evidence=ISS

UNIPROTKB|E1BVV7 CSNK1D "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 70/130 (53%), Positives = 84/130 (64%)

Query:     1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
             MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct:   235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294

Query:    61 LKFGGSRGPAGAQPVGRKIKS-YDYVFDWNM--LKFGGSRGPAGAQPVAGDTPTNPPGVD 117
             LKFG SRG   A+   R+ +    +  +  +  L    S    G Q VA  TP  P    
Sbjct:   295 LKFGASRGAEDAERERREREERLRHTRNPAVRGLPSTASGRLRGTQDVAPPTPLTPTSHA 354

Query:   118 APPASRTRAG 127
             A  +SR  +G
Sbjct:   355 ANTSSRPVSG 364

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
KOG1165|consensus	449		99.51
KOG1163|consensus	341		99.4
KOG1164|consensus	322		98.28

>KOG1165|consensus

Probab=99.51  E-value=2e-14  Score=138.57  Aligned_cols=66  Identities=50%  Similarity=0.877  Sum_probs=62.1

Q ss_pred             CCCCHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccCCCCCC
Q psy14895          1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGS   66 (276)
Q Consensus         1 mstpiEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~k~~q~   66 (276)
                      ++|++++||+|+|.||+.||+|+|+|+|+|+|||+||++||.++|.+++..+|..|||..++.+..
T Consensus       256 r~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln~g~g  321 (449)
T KOG1165|consen  256 RSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLNNGKG  321 (449)
T ss_pred             ccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccCCCCC
Confidence            478999999999999999999999999999999999999999999999999999999998875443

>KOG1163|consensus

Probab=99.40  E-value=2e-13  Score=127.85  Aligned_cols=63  Identities=63%  Similarity=1.176  Sum_probs=60.2

Q ss_pred             CCCCHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccCCC
Q psy14895          1 MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKF   63 (276)
Q Consensus         1 mstpiEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~k~   63 (276)
                      ++++++.||+|+|.||..|++|||+|.|+|+|||.||+++|+-++...+...|..|||...+.
T Consensus       241 ~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkq  303 (341)
T KOG1163|consen  241 MSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQ  303 (341)
T ss_pred             cCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHH
Confidence            579999999999999999999999999999999999999999999999999999999998763

>KOG1164|consensus

Probab=98.28  E-value=1.4e-06  Score=79.26  Aligned_cols=57  Identities=33%  Similarity=0.574  Sum_probs=52.4

Q ss_pred             HhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccCCCC
Q psy14895          8 LCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFG   64 (276)
Q Consensus         8 LCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~k~~   64 (276)
                      +|..+|.+|..|+.||++|+|+++|||.+|+.+|++++.+.++..+.+|||+.....
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~~~~  317 (322)
T KOG1164|consen  261 FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVKLRL  317 (322)
T ss_pred             ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcccccccc
Confidence            566788999999999999999999999999999999999999999999999976543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	276
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		2e-28
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		2e-26
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		2e-26
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		2e-20
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		2e-14
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		8e-14
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		6e-13
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		6e-13
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		6e-13
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		5e-11
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		6e-11

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 59/66 (89%)
Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292
Query: 61  LKFGGS 66
           LKFG S
Sbjct: 293 LKFGAS 298

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 56/62 (90%)
Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294
Query: 61  LK 62
           LK
Sbjct: 295 LK 296

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 56/62 (90%)
Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 235 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294
Query: 61  LK 62
           LK
Sbjct: 295 LK 296

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           ++T IE LC+GYP EF ++  Y RSLRF++KPDYSY ++LFR+LF R+GF +DYVFDW +
Sbjct: 233 VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTI 292
Query: 61  LKFGGSR 67
           LK+  S+
Sbjct: 293 LKYQQSQ 299

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2   STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDW 58
           +TPIE LC+ +P E  T+L Y R L F EKPDY Y R LF +LF +KG+T+DY +DW
Sbjct: 230 NTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDW 286

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 2   STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDW 58
           +TPIE LC+ +P E  T+L Y R L F EKPDY Y R+LF +LF R GF +DY +DW
Sbjct: 233 ATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFDYEYDW 289

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 2   STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDW 58
           +TPIE LC+ +P E  T+L Y R L F EKPDY Y R+LF +LF RKG+ +DY +DW
Sbjct: 238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 293

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 2   STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDW 58
           +TPIE LC+ +P E  T+L Y R L F EKPDY Y R+LF +LF RKG+ +DY +DW
Sbjct: 259 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 314

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 2   STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDW 58
           +TPIE LC+ +P E  T+L Y R L F EKPDY Y R+LF +LF RKG+ +DY +DW
Sbjct: 238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 293

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 2   STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNML 61
           STP+ ELC G+P EF  ++ Y+R+L F+  PDY Y + LF  +  R   T D  FDWN+L
Sbjct: 238 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL 297

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 2   STPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNML 61
           STP+ ELC G+P EF  ++ Y+R+L F+  PDY Y + LF  +  R   T D  FDWN+L
Sbjct: 239 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL 298

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	276
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-31
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-31
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-30
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-29
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-28
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-22
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	5e-21

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score =  118 bits (298), Expect = 1e-31
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
            +TPIE LC+ +P E  T+L Y R L F EKPDY Y R+LF +LF RKG+ +DY +DW  
Sbjct: 237 RATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIG 295

Query: 61  LKFGGSRGPAGAQP 74
            +     G     P
Sbjct: 296 KQLPTPVGAVQQDP 309

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score =  116 bits (292), Expect = 4e-31
 Identities = 50/62 (80%), Positives = 56/62 (90%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294

Query: 61  LK 62
           LK
Sbjct: 295 LK 296

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score =  114 bits (287), Expect = 2e-30
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
            STP+ ELC G+P EF  ++ Y+R+L F+  PDY Y + LF  +  R   T D  FDWN+
Sbjct: 238 QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNL 297

Query: 61  L 61
           L
Sbjct: 298 L 298

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score =  115 bits (290), Expect = 1e-29
 Identities = 69/256 (26%), Positives = 101/256 (39%), Gaps = 16/256 (6%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           ++T IE LC+GYP EF ++  Y RSLRF++KPDYSY ++LFR+LF R+GF +DYVFDW +
Sbjct: 233 VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTI 292

Query: 61  LKFGGSR---GPAGAQPVGRKIKSYDYVFDWNMLKFGGSRGPAGAQPVAGDTPTNPPGVD 117
           LK+  S+    P  A   G            N  + G   G              PP   
Sbjct: 293 LKYQQSQIASAPPRAVGHGAGPSGLAPPALQNDRQSGVDEGRTSGWSSMDRRRAPPPIAS 352

Query: 118 APPASRTRAGGTNGEGESPQHPPTKSYHSPAVISSNNKPVPNIVPRVLAPNAASRPFVDY 177
               ++ +A   N    S +           VIS++N    +         ++SR  +  
Sbjct: 353 VGTLAKQKAPVGNDASFSKE----------PVISASNFLGRSSGSSRRPAVSSSRDVMP- 401

Query: 178 RGSGGGEERGGGGGDSSRMWKKPIIPPPVPEPENKFYFPPSAPNAASRPFVDYRGSGGGE 237
                 E       D+S    +    P    P N      S+    S    +Y  +  G 
Sbjct: 402 --IDTSEPSRTRATDASPGAFRRTSGPQKSSPVNSAEPKHSSSARHSSNVKNYESALKGI 459

Query: 238 ERGGGGGDSSRMWKKP 253
           E     GD    +   
Sbjct: 460 EGLNFDGDERVQYAAA 475

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score =  110 bits (276), Expect = 2e-28
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 1   MSTPIEELC---KGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFD 57
               + + C      PGE   ++   + L + EKP Y   R +        G   D   D
Sbjct: 281 NIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLD 340

Query: 58  WNMLKFGGSRGPAGAQPVGRKIK 80
            ++++ GG +     +    +I+
Sbjct: 341 LSVVENGGLKAKTITKKRAAEIE 363

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 94.8 bits (236), Expect = 1e-22
 Identities = 12/63 (19%), Positives = 18/63 (28%), Gaps = 3/63 (4%)

Query: 1   MSTPIEELCKGY---PGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFD 57
              P    C  +         +L    +L +EEKP Y+  R     L      +      
Sbjct: 288 KPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIG 347

Query: 58  WNM 60
             M
Sbjct: 348 LPM 350

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 89.8 bits (223), Expect = 5e-21
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
            S            E   FL+ + SL ++EKP+Y   +++        G       D++ 
Sbjct: 283 QSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGP-----LDFST 337

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	276
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.24
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	97.78
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	97.76
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	97.76
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	97.72
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	97.62
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	96.18

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.24  E-value=1.2e-06  Score=82.94  Aligned_cols=65  Identities=60%  Similarity=1.277  Sum_probs=57.8

Q ss_pred             CCHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccCCCCCCC
Q psy14895          3 TPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSR   67 (276)
Q Consensus         3 tpiEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~k~~q~k   67 (276)
                      ..++.||.++|.+|..++..|..++++++|+|+.|.++|++++.+.++.++..|||+..+..+..
T Consensus       235 ~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~~~~~  299 (483)
T 3sv0_A          235 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ  299 (483)
T ss_dssp             SCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC----
T ss_pred             ccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhcccccc
Confidence            35678999999999999999999999999999999999999999999999999999987765543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=97.78  E-value=4.2e-05  Score=66.08  Aligned_cols=57  Identities=56%  Similarity=1.142  Sum_probs=53.5

Q ss_pred             CCHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCccccccc
Q psy14895          3 TPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM   60 (276)
Q Consensus         3 tpiEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~   60 (276)
                      .+.+.+|..+| +|..++..|..+++.++|+|+.|.++|++++.+.++..+..|||+.
T Consensus       239 ~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~  295 (330)
T 2izr_A          239 TPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIG  295 (330)
T ss_dssp             SCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTT
T ss_pred             CCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCC
Confidence            45678899999 9999999999999999999999999999999999999999999984

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=97.76  E-value=6.3e-05  Score=62.68  Aligned_cols=59  Identities=80%  Similarity=1.518  Sum_probs=55.2

Q ss_pred             CHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccCC
Q psy14895          4 PIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLK   62 (276)
Q Consensus         4 piEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~k   62 (276)
                      +.+.+|.++|.++.+++..|-..+..++|+++.|.++|++++.+.+++.+.+|||+..+
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~~~  296 (296)
T 4hgt_A          238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK  296 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGGCC
T ss_pred             hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhhcC
Confidence            46678899999999999999999999999999999999999999999999999999753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=97.76  E-value=5.1e-05  Score=63.47  Aligned_cols=58  Identities=45%  Similarity=0.965  Sum_probs=54.1

Q ss_pred             CCHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCccccccc
Q psy14895          3 TPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM   60 (276)
Q Consensus         3 tpiEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~   60 (276)
                      .+..++|.++|.++.+++..|-..+..++|+++.|.++|++++.+.+...+.+|||+.
T Consensus       240 ~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~  297 (298)
T 1csn_A          240 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNL  297 (298)
T ss_dssp             SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGGC
T ss_pred             ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccCC
Confidence            3456788899999999999999999999999999999999999999999999999986

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=97.72  E-value=5e-05  Score=66.86  Aligned_cols=61  Identities=23%  Similarity=0.391  Sum_probs=47.8

Q ss_pred             cCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccCCCCCCCCCC
Q psy14895         10 KGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSRGPA   70 (276)
Q Consensus        10 kGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~k~~q~k~~~   70 (276)
                      .++|.+|..++..|..+++.++|+|+.|.++|++++.+.++..+..|||+....+....++
T Consensus       293 ~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~~~~~~~~~~~  353 (364)
T 3op5_A          293 ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKT  353 (364)
T ss_dssp             TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC------------
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccceEeccCCccchhh
Confidence            6789999999999999999999999999999999999999999999999987765554443

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=97.62  E-value=0.00014  Score=60.68  Aligned_cols=58  Identities=79%  Similarity=1.526  Sum_probs=54.7

Q ss_pred             CHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccC
Q psy14895          4 PIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNML   61 (276)
Q Consensus         4 piEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~   61 (276)
                      +.+.+|..+|.++.+++..|-..+..++|+.+.|.+.|++++.+.+...+.+|||+..
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~~~  295 (296)
T 3uzp_A          238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML  295 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGGGC
T ss_pred             chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccccccccccc
Confidence            4567889999999999999999999999999999999999999999999999999975

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=96.18  E-value=0.0089  Score=52.10  Aligned_cols=51  Identities=20%  Similarity=0.264  Sum_probs=47.9

Q ss_pred             CCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccC
Q psy14895         11 GYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNML   61 (276)
Q Consensus        11 GLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~   61 (276)
                      .+|.++.+++..|-..+..++|+++.|.+.|++++.+.+...+.++||+..
T Consensus       301 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~dw~~~  351 (352)
T 2jii_A          301 RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGLPMV  351 (352)
T ss_dssp             CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCCCCC-
T ss_pred             CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCccccCcCC
Confidence            568999999999999999999999999999999999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	276
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-20
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-19

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.3 bits (210), Expect = 5e-20
 Identities = 54/67 (80%), Positives = 60/67 (89%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
           MSTPIE LCKGYP EF T+L + RSLRF++KPDYSY RQLFRNLFHR+GF+YDYVFDWNM
Sbjct: 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 292

Query: 61  LKFGGSR 67
           LKFG SR
Sbjct: 293 LKFGASR 299

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 83.7 bits (206), Expect = 2e-19
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query: 1   MSTPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNM 60
            STP+ ELC G+P EF  ++ Y+R+L F+  PDY Y + LF  +  R   T D  FDWN+
Sbjct: 233 QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNL 292

Query: 61  L 61
           L
Sbjct: 293 L 293

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	276
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.86
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.61

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.86  E-value=1.4e-09  Score=93.19  Aligned_cols=59  Identities=46%  Similarity=0.971  Sum_probs=55.9

Q ss_pred             CCHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccC
Q psy14895          3 TPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNML   61 (276)
Q Consensus         3 tpiEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~   61 (276)
                      +++++||.+||++|..|+++|..|+++++|||+.|+++|++++++.++..+.+|||+.+
T Consensus       235 ~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~~~~~~~~Dw~~~  293 (293)
T d1csna_         235 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL  293 (293)
T ss_dssp             SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGGCC
T ss_pred             CChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcCCCCCCCCCCCcC
Confidence            46788999999999999999999999999999999999999999999999999999863

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.61  E-value=1.8e-08  Score=85.34  Aligned_cols=65  Identities=80%  Similarity=1.498  Sum_probs=60.2

Q ss_pred             CCHHHHhcCCCchHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHcCCCCCcccccccCCCCCCC
Q psy14895          3 TPIEELCKGYPGEFPTFLLYSRSLRFEEKPDYSYTRQLFRNLFHRKGFTYDYVFDWNMLKFGGSR   67 (276)
Q Consensus         3 tpiEeLCkGLPkEF~eIL~YIRSLkFdDkPDYdyIrsLFkqaLkr~gis~D~pYDWE~~k~~q~k   67 (276)
                      .+.+.++.+||.+|..++.+|.+++++++|+|+.|+++|++++.+.+++.+.+|||+..+.+.+|
T Consensus       235 ~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~~~Dw~~~~~~~~~  299 (299)
T d1ckia_         235 TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASR  299 (299)
T ss_dssp             SCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTCCCSCCCHHHHGGGTCCC
T ss_pred             CChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcCCCCCCCcCchhhcCCCCC
Confidence            45678899999999999999999999999999999999999999999999999999998877654