Psyllid ID: psy14900

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
LKTPPAFHAQRRQLERAKTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEPPDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERERGIVGSDMLETAAANAGIV
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHccHHHHHHHccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccHHHHHHHcccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
LKTPPAFHAQRRQLERAKTGDLLKAFSKKLVSLkrlsapripssektlktppaFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILlgdegvgfvdpslAEKQRRLSKCRLADQLNdqlahrpgplelikknilhteePIERAVKEGVIAFRAtcegqssrpeppdhymtldddsrsseatsppslsgeaggvrassppslseererggrrassptslseerergivgsdMLETAAANAGIV
Flexible Loop (DISEMBL)
lktppafhaqrrqleraktgdllKAFSKKlvslkrlsapripssektlktppafhAQRRQleraktgdllkakiqarpartELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQlndqlahrpgplELIKKNILHTEEPIERAVKEGVIAFRAtcegqssrpeppdHYMTLDDDSRSSEATsppslsgeaggvrassppslseererggrrassptslseerergivgsdmletaaanagiv
Low Complexity Region (SEG)
LKTPPAFHAQRRQLERAKTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEPPDHYMTLDDDSRSSEATSPPSLSGEAGGVRAssppslseererggrrASSPTSLSEERERGIVGSDMLETAAANAGIV
Disordered region (IsUnstruct)
******************************************************************************ARTELVRQHILLGDEGVGFVDPSL*********CRLA***********GPLELIKKNILHTEEPIERAVKEGVIAFRATC***************************************************************************************
Disordered Region (DISOPRED)
*********************************************************************************************************************************ELIKKNIL*********************************************************************************************************GIV
Disordered Region (DISEMBL)
LKTPPAFHAQRRQLERAKTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEPPDHYMT******************************************************GIVGSDMLETAAANAGIV
Disordered Region (DISPRO)
**TPPAFHAQRRQLERAKTGDLLKAFS*K*****RLS******S*KTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRA*****************************************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
LKTPPAFHAQRRQLERAKTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEPPDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERERGIVGSDMLETAAANAGIV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	245	2.2.26 [Sep-21-2011]
Q9ULH7	1088	MKL/myocardin-like protei	yes	N/A	0.583	0.131	0.434	3e-23
Q8AYC1	1067	Myocardin-related transcr	N/A	N/A	0.559	0.128	0.448	4e-23
Q969V6	931	MKL/myocardin-like protei	no	N/A	0.4	0.105	0.537	5e-23
Q8K4J6	964	MKL/myocardin-like protei	yes	N/A	0.4	0.101	0.537	5e-23
P59759	1080	MKL/myocardin-like protei	no	N/A	0.395	0.089	0.514	1e-22
Q8AYC2	936	Myocardin-related transcr	N/A	N/A	0.489	0.128	0.474	6e-22
Q7YR76	933	Myocardin OS=Sus scrofa G	no	N/A	0.391	0.102	0.451	1e-16
Q8R5I7	938	Myocardin OS=Rattus norve	no	N/A	0.391	0.102	0.432	1e-14
Q8IZQ8	938	Myocardin OS=Homo sapiens	no	N/A	0.567	0.148	0.341	5e-14
Q8VIM5	935	Myocardin OS=Mus musculus	no	N/A	0.391	0.102	0.442	6e-14

>sp|Q9ULH7|MKL2_HUMAN MKL/myocardin-like protein 2 OS=Homo sapiens GN=MKL2 PE=1 SV=3

 Score =  108 bits (271), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 18/161 (11%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH Q + LERA+T + LK KI++RP R+ELVR HIL  +E   F +PSL   Q 
Sbjct: 64  LKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHIL--EET--FAEPSLQATQM 119

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
           +L + RLAD LN+++A RPGP+EL++KNIL    P++ +VKE +I       G+   P  
Sbjct: 120 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVDSSVKEAIIGV-----GKEDYPHT 170

Query: 168 PDHYMTLDDDSRSSEATSP--PSLSGEAGGVRASSPPSLSE 206
              + + D+D  SS+A SP  P+     G   + S P +SE
Sbjct: 171 QGDF-SFDED--SSDALSPDQPASQESQGSAASPSEPKVSE 208

Acts as a transcriptional coactivator of serum response factor (SRF). Required for skeletal myogenic differentiation.
Homo sapiens (taxid: 9606)

>sp|Q8AYC1|MRTFB_XENLA Myocardin-related transcription factor B OS=Xenopus laevis GN=mrtfb PE=2 SV=1

 Score =  108 bits (270), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 96/154 (62%), Gaps = 17/154 (11%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH Q + LERA+T + LK KI++RP R+ELVR HIL  +E +   +PSL   Q 
Sbjct: 70  LKSPAAFHEQIKSLERARTENFLKHKIRSRPNRSELVRMHIL--EETLA--EPSLQATQL 125

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
           +L + RLAD LN+++A RPGPLEL++KNIL    P++ +VKE +         Q++ PE 
Sbjct: 126 KLKRARLADDLNEKIAQRPGPLELVEKNIL----PVDLSVKEAITV------SQTNLPEN 175

Query: 168 PDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSP 201
            D   TL  D  SS+A SP   + +     A+SP
Sbjct: 176 LD---TLSFDEDSSDALSPEQPASQESQGSAASP 206

Poor transcriptional factor which uses the canonical single or multiple CArG boxes DNA sequence. Acts as a cofactor of serum response factor (SRF) with the potential to modulate SRF target genes.

Xenopus laevis (taxid: 8355)

>sp|Q969V6|MKL1_HUMAN MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1

 Score =  108 bits (269), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 8/106 (7%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL         +PSL  KQ 
Sbjct: 4   LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHILEETSA----EPSLQAKQL 59

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIA 153
           +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I 
Sbjct: 60  KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV 101

Transcriptional coactivator of serum response factor (SRF) with the potential to modulate SRF target genes. Suppresses TNF-induced cell death by inhibiting activation of caspases; its transcriptional activity is indispensable for the antiapoptotic function. It may up-regulate antiapoptotic molecules, which in turn inhibit caspase activation.

Homo sapiens (taxid: 9606)

>sp|Q8K4J6|MKL1_MOUSE MKL/myocardin-like protein 1 OS=Mus musculus GN=Mkl1 PE=1 SV=2

 Score =  108 bits (269), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 8/106 (7%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL         +PSL  KQ 
Sbjct: 39  LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETSA----EPSLQAKQL 94

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIA 153
           +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I 
Sbjct: 95  KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV 136

Transcriptional coactivator of serum response factor (SRF) with the potential to modulate SRF target genes. Suppresses TNF-induced cell death by inhibiting activation of caspases; its transcriptional activity is indispensable for the antiapoptotic function. It may up-regulate antiapoptotic molecules, which in turn inhibit caspase activation.

Mus musculus (taxid: 10090)

>sp|P59759|MKL2_MOUSE MKL/myocardin-like protein 2 OS=Mus musculus GN=Mkl2 PE=1 SV=1

 Score =  106 bits (265), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 74/105 (70%), Gaps = 8/105 (7%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH Q + LERA+T + LK KI++RP R+ELVR HIL       F +PSL   Q 
Sbjct: 64  LKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHIL----EETFAEPSLQATQM 119

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVI 152
           +L + RLAD LN+++A RPGP+EL++KNIL    P++ +VKE +I
Sbjct: 120 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVDSSVKEAII 160

Acts as a transcriptional coactivator of serum response factor (SRF). Required for skeletal myogenic differentiation.

Mus musculus (taxid: 10090)

>sp|Q8AYC2|MRTFA_XENLA Myocardin-related transcription factor A OS=Xenopus laevis GN=mrtfa PE=2 SV=1

 Score =  104 bits (260), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 87/139 (62%), Gaps = 19/139 (13%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL         +PSL  KQ 
Sbjct: 39  LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETSA----EPSLQAKQI 94

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
           +L + RLAD LN++++ RPGP+EL+ KNIL    P+E ++KE +I            PE 
Sbjct: 95  KLKRARLADDLNEKISQRPGPMELVVKNIL----PVETSLKEVIIDV--------DYPEV 142

Query: 168 PDHYMTLDDDSRSSEATSP 186
            D+  + D+D  SS+A SP
Sbjct: 143 VDNS-SFDED--SSDALSP 158

Transcriptional factor which uses the canonical single or multiple CArG boxes DNA sequence. Acts as a cofactor of serum response factor (SRF) and has the potential to modulate SRF-target genes.

Xenopus laevis (taxid: 8355)

>sp|Q7YR76|MYCD_PIG Myocardin OS=Sus scrofa GN=MYOCD PE=2 SV=1

 Score = 87.0 bits (214), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 8/104 (7%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           L++PPAFH QRR+LE  K  D LK K++ R  R  +V+ HIL         +  +   Q 
Sbjct: 42  LRSPPAFHEQRRRLESDKAADTLKHKVRNRSDRGNVVKMHILQASS----AERPVPAAQM 97

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGV 151
           +L + RLAD LN+++A RPGPLEL++KNIL    P++ AVKE +
Sbjct: 98  KLKRARLADDLNEKIALRPGPLELVEKNIL----PVDCAVKEAI 137

Smooth muscle cells (SM) and cardiac muscle cells-specific transcriptional factor which uses the canonical single or multiple CArG boxes DNA sequence. Acts as a cofactor of serum response factor (SRF) with the potential to modulate SRF-target genes. Plays a crucial role in cardiogenesis and differentiation of the smooth muscle cell lineage (myogenesis).

Sus scrofa (taxid: 9823)

>sp|Q8R5I7|MYCD_RAT Myocardin OS=Rattus norvegicus GN=Myocd PE=1 SV=2

 Score = 80.5 bits (197), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 8/104 (7%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P  FH  R++L+ AKT D L+ K++ R  R  LV  HIL         + S+   Q 
Sbjct: 42  LKSPTEFHDPRKKLDSAKTEDSLRRKVRNRSDRASLVNMHILQASTA----ERSIPTAQM 97

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGV 151
           +L + RLAD LN+++A RPGPLEL++KNIL    P++ +VKE +
Sbjct: 98  KLKRARLADDLNEKIALRPGPLELVEKNIL----PMDSSVKEAI 137

Smooth muscle cells (SM) and cardiac muscle cells-specific transcriptional factor which uses the canonical single or multiple CArG boxes DNA sequence. Acts as a cofactor of serum response factor (SRF) with the potential to modulate SRF-target genes (By similarity). Plays a crucial role in cardiogenesis and differentiation of the smooth muscle cell lineage (myogenesis).

Rattus norvegicus (taxid: 10116)

>sp|Q8IZQ8|MYCD_HUMAN Myocardin OS=Homo sapiens GN=MYOCD PE=1 SV=1

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK P  FH QR+ L+  K  + LK K + R    +LV  HIL         + S+   Q 
Sbjct: 42  LKRPAEFHEQRKHLDSDKAKNSLKRKARNRCNSADLVNMHILQASTA----ERSIPTAQM 97

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
           +L + RLAD LN+++A RPGPLEL++KNIL  +  ++ A+K   ++F  + +        
Sbjct: 98  KLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDA------- 150

Query: 168 PDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPP 202
                  ++DS SS+  SP     E     A SPP
Sbjct: 151 ----FAFEEDS-SSDGLSPDQTRSEDPQNSAGSPP 180

Smooth muscle cells (SM) and cardiac muscle cells-specific transcriptional factor which uses the canonical single or multiple CArG boxes DNA sequence. Acts as a cofactor of serum response factor (SRF) with the potential to modulate SRF-target genes. Plays a crucial role in cardiogenesis and differentiation of the smooth muscle cell lineage (myogenesis).

Homo sapiens (taxid: 9606)

>sp|Q8VIM5|MYCD_MOUSE Myocardin OS=Mus musculus GN=Myocd PE=1 SV=2

 Score = 77.8 bits (190), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 8/104 (7%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK P  FH  R+QL+ AKT D L+ K + R  R  LV  HIL         + S+   Q 
Sbjct: 42  LKGPTEFHDPRKQLDSAKTEDSLRRKGRNRSDRASLVTMHILQAST----AERSIPTAQM 97

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGV 151
           +L + RLAD LN+++A RPGPLEL++KNIL    P++ +VKE +
Sbjct: 98  KLKRARLADDLNEKIALRPGPLELVEKNIL----PMDSSVKEAI 137

Smooth muscle cells (SM) and cardiac muscle cells-specific transcriptional factor which uses the canonical single or multiple CArG boxes DNA sequence. Acts as a cofactor of serum response factor (SRF) with the potential to modulate SRF-target genes. Plays a crucial role in cardiogenesis and differentiation of the smooth muscle cell lineage (myogenesis). Isoform 1 mediates the cardiac transcription factor MEF2C-dependent transcription. Isoform 1 and isoform 3 are more active than isoform 2 and isoform 4 in stimulating cardiac muscle promoters.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
340716060	1241	PREDICTED: hypothetical protein LOC10064	0.640	0.126	0.618	1e-57
350404381	1238	PREDICTED: hypothetical protein LOC10074	0.640	0.126	0.618	1e-57
328788581	1241	PREDICTED: hypothetical protein LOC40860	0.640	0.126	0.618	2e-57
307200038	1025	MKL/myocardin-like protein 1 [Harpegnath	0.636	0.152	0.621	2e-57
322801479	391	hypothetical protein SINV_10316 [Solenop	0.673	0.421	0.597	4e-57
383866075	1674	PREDICTED: uncharacterized protein LOC10	0.636	0.093	0.611	5e-57
307188384	936	MKL/myocardin-like protein 1 [Camponotus	0.640	0.167	0.616	6e-57
242012275	1214	hypothetical protein Phum_PHUM281890 [Pe	0.775	0.156	0.595	2e-54
328710979	963	PREDICTED: hypothetical protein LOC10016	0.714	0.181	0.575	1e-47
189235271	945	PREDICTED: similar to Myocardin-related	0.632	0.164	0.563	2e-46

>gi|340716060|ref|XP_003396521.1| PREDICTED: hypothetical protein LOC100649623 [Bombus terrestris]

 Score =  229 bits (583), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/199 (61%), Positives = 138/199 (69%), Gaps = 42/199 (21%)

Query: 47  TLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQ 106
           +LKTPPAFH QR+QLERAKTGDLLKAKIQ RP R ELVRQHIL   E VG VDPSLAE+Q
Sbjct: 225 SLKTPPAFHEQRKQLERAKTGDLLKAKIQQRPGREELVRQHIL---EDVGHVDPSLAERQ 281

Query: 107 RRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPE 166
           R L K RLADQLNDQL+HRPGPLELI+KNILHTEEPIERAVKEG I+F+ATCEGQ ++P+
Sbjct: 282 RMLKKARLADQLNDQLSHRPGPLELIQKNILHTEEPIERAVKEGHISFKATCEGQVTKPQ 341

Query: 167 PPDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERE 226
            PDHY+T +DDS+SSE    P L                E R                  
Sbjct: 342 HPDHYITFEDDSQSSEGAPSPQL----------------ESR------------------ 367

Query: 227 RGIVGSDMLETAAANAGIV 245
                SD+LETAAA+AGIV
Sbjct: 368 -----SDVLETAAASAGIV 381

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350404381|ref|XP_003487086.1| PREDICTED: hypothetical protein LOC100742623 [Bombus impatiens]

 Score =  228 bits (582), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/199 (61%), Positives = 138/199 (69%), Gaps = 42/199 (21%)

Query: 47  TLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQ 106
           +LKTPPAFH QR+QLERAKTGDLLKAKIQ RP R ELVRQHIL   E VG VDPSLAE+Q
Sbjct: 222 SLKTPPAFHEQRKQLERAKTGDLLKAKIQQRPGREELVRQHIL---EDVGHVDPSLAERQ 278

Query: 107 RRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPE 166
           R L K RLADQLNDQL+HRPGPLELI+KNILHTEEPIERAVKEG I+F+ATCEGQ ++P+
Sbjct: 279 RMLKKARLADQLNDQLSHRPGPLELIQKNILHTEEPIERAVKEGHISFKATCEGQVTKPQ 338

Query: 167 PPDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERE 226
            PDHY+T +DDS+SSE    P L                E R                  
Sbjct: 339 HPDHYITFEDDSQSSEGAPSPQL----------------ESR------------------ 364

Query: 227 RGIVGSDMLETAAANAGIV 245
                SD+LETAAA+AGIV
Sbjct: 365 -----SDVLETAAASAGIV 378

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788581|ref|XP_392144.3| PREDICTED: hypothetical protein LOC408602 [Apis mellifera]

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/199 (61%), Positives = 137/199 (68%), Gaps = 42/199 (21%)

Query: 47  TLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQ 106
           +LKTPPAFH QR+QLERAKTGDLLKAKIQ RP R ELVRQHIL   E VG VDPSLAE+Q
Sbjct: 209 SLKTPPAFHEQRKQLERAKTGDLLKAKIQQRPGREELVRQHIL---EDVGHVDPSLAERQ 265

Query: 107 RRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPE 166
           R L K RLADQLNDQL+HRPGPLELI+KNILHTEEPIERAVKEG I F+ATCEGQ ++P+
Sbjct: 266 RMLKKARLADQLNDQLSHRPGPLELIQKNILHTEEPIERAVKEGHIPFKATCEGQVTKPQ 325

Query: 167 PPDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERE 226
            PDHY+T +DDS+SSE    P L                E R                  
Sbjct: 326 HPDHYITFEDDSQSSEGAPSPQL----------------ESR------------------ 351

Query: 227 RGIVGSDMLETAAANAGIV 245
                SD+LETAAA+AGIV
Sbjct: 352 -----SDVLETAAASAGIV 365

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200038|gb|EFN80384.1| MKL/myocardin-like protein 1 [Harpegnathos saltator]

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/198 (62%), Positives = 136/198 (68%), Gaps = 42/198 (21%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LKTPPAFH QR+QLERAKTGDLLKAKIQ RP R ELVRQHIL   E VG VDPSLAE+QR
Sbjct: 18  LKTPPAFHEQRKQLERAKTGDLLKAKIQQRPGRDELVRQHIL---EDVGHVDPSLAERQR 74

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
            L K RLADQLNDQL+HRPGPLELI+KNILHTEEPIERAVKEG I F+ATCEGQ ++P+ 
Sbjct: 75  MLKKARLADQLNDQLSHRPGPLELIQKNILHTEEPIERAVKEGHIPFKATCEGQVTKPQH 134

Query: 168 PDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERER 227
           PDHY+T +DDS+SSE    P L                E R                   
Sbjct: 135 PDHYITFEDDSQSSEGAPSPQL----------------ESR------------------- 159

Query: 228 GIVGSDMLETAAANAGIV 245
               SD+LETAAA+AGIV
Sbjct: 160 ----SDVLETAAASAGIV 173

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322801479|gb|EFZ22140.1| hypothetical protein SINV_10316 [Solenopsis invicta]

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/206 (59%), Positives = 138/206 (66%), Gaps = 41/206 (19%)

Query: 40  RIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVD 99
           R  S+   LKTPPAFH QR+QLERAKTGDLLKAKIQ RP R ELVRQHIL   E VG VD
Sbjct: 22  RATSAVGALKTPPAFHEQRKQLERAKTGDLLKAKIQQRPGRDELVRQHIL---EDVGHVD 78

Query: 100 PSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCE 159
           PSLAE+QR L K RLADQLNDQL+HRPGPLELI+KNILHTEEPIERAVKEG I F+ATCE
Sbjct: 79  PSLAERQRMLKKARLADQLNDQLSHRPGPLELIQKNILHTEEPIERAVKEGHIPFKATCE 138

Query: 160 GQSSRPEPPDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPT 219
           GQ ++P+ PDHY+T +DDS+SSE    P L   +                          
Sbjct: 139 GQVTKPQHPDHYITFEDDSQSSEGAPSPQLESRS-------------------------- 172

Query: 220 SLSEERERGIVGSDMLETAAANAGIV 245
                       SD+LETAAA+AGIV
Sbjct: 173 ------------SDVLETAAASAGIV 186

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866075|ref|XP_003708497.1| PREDICTED: uncharacterized protein LOC100876600 [Megachile rotundata]

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 121/198 (61%), Positives = 134/198 (67%), Gaps = 42/198 (21%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LKTPPAFH QR+QLERAKTGDLLKAKIQ RP R ELVRQHIL   E VG VDPSLAE+QR
Sbjct: 655 LKTPPAFHEQRKQLERAKTGDLLKAKIQQRPGREELVRQHIL---EDVGHVDPSLAERQR 711

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
            L K RLADQLNDQL+HRPGPLELI+KNILHTEEPIERAVKEG I F+ATCEGQ ++P+ 
Sbjct: 712 MLKKARLADQLNDQLSHRPGPLELIQKNILHTEEPIERAVKEGHIPFKATCEGQVTKPQH 771

Query: 168 PDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERER 227
           PDHY+T +DDS+SSE    P L   A                                  
Sbjct: 772 PDHYITFEDDSQSSEGAPSPQLESRA---------------------------------- 797

Query: 228 GIVGSDMLETAAANAGIV 245
                D+LETAAA+AGIV
Sbjct: 798 -----DVLETAAASAGIV 810

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188384|gb|EFN73146.1| MKL/myocardin-like protein 1 [Camponotus floridanus]

 Score =  226 bits (576), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/198 (61%), Positives = 135/198 (68%), Gaps = 41/198 (20%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LKTPPAFH QR+QLERAKTGDLLKAKIQ RP R ELVRQHIL   E VG VDPSLAE+QR
Sbjct: 14  LKTPPAFHEQRKQLERAKTGDLLKAKIQQRPGRDELVRQHIL---EDVGHVDPSLAERQR 70

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
            L K RLAD LNDQL+HRPGPLELI+KNILHTEEPIERAVKEG I F+ATCEGQ ++P+ 
Sbjct: 71  MLKKARLADHLNDQLSHRPGPLELIQKNILHTEEPIERAVKEGHIPFKATCEGQVTKPQH 130

Query: 168 PDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERER 227
           PDHY+T +DDS+SSE    P L                E R                   
Sbjct: 131 PDHYITFEDDSQSSEGAPSPQL----------------ESR------------------- 155

Query: 228 GIVGSDMLETAAANAGIV 245
               SD+LETAAA+AGIV
Sbjct: 156 ---SSDVLETAAASAGIV 170

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242012275|ref|XP_002426859.1| hypothetical protein Phum_PHUM281890 [Pediculus humanus corporis] gi|212511072|gb|EEB14121.1| hypothetical protein Phum_PHUM281890 [Pediculus humanus corporis]

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/205 (59%), Positives = 143/205 (69%), Gaps = 15/205 (7%)

Query: 47  TLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQ 106
           +LKTPPAFH QR++LERAK GDLLKAKIQ RP R ELVRQHIL  D  VG VDPSLAE+Q
Sbjct: 17  SLKTPPAFHEQRQKLERAKMGDLLKAKIQQRPDREELVRQHILEAD--VGHVDPSLAERQ 74

Query: 107 RRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPE 166
           R L K RLAD LNDQL HRPGPLELIKKNILHTEEPIERAVKEG I F+AT EGQ  +P+
Sbjct: 75  RMLKKARLADSLNDQLCHRPGPLELIKKNILHTEEPIERAVKEGAIPFKATSEGQLRKPQ 134

Query: 167 PPDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSL----SEERERGGRRASSPTS-- 220
            PDHY+T +DDS+SSE    P+ +       A   P+L    +         +++P +  
Sbjct: 135 HPDHYITFEDDSQSSEGAGSPTNTPTTFSNNAL--PALDTVANSSSSSSSSSSNTPQTSK 192

Query: 221 LSEERERGIVGSDMLETAAANAGIV 245
             E R R     D+LETAAA+AGI+
Sbjct: 193 TKESRPR-----DVLETAAASAGIM 212

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328710979|ref|XP_001947845.2| PREDICTED: hypothetical protein LOC100161677 [Acyrthosiphon pisum]

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/198 (57%), Positives = 129/198 (65%), Gaps = 23/198 (11%)

Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+PPAFH QR++LERAK GDLLKAKIQ RP + +LVRQHIL   E VG VD SLAE+QR
Sbjct: 137 LKSPPAFHEQRQKLERAKMGDLLKAKIQQRPDKQQLVRQHIL---EDVGDVDRSLAERQR 193

Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
            L KCRLAD LN QLAHRPGPLELIKKNILHT+EPIERAVKEG I F+AT EGQ  +PE 
Sbjct: 194 MLVKCRLADSLNTQLAHRPGPLELIKKNILHTDEPIERAVKEGQIEFKATSEGQKIKPEL 253

Query: 168 PDHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERER 227
           PD Y+TLD+DS+SS                   P S++                      
Sbjct: 254 PDQYLTLDEDSQSSGGAGSSCSPPPPPPPPPPPPSSVALTHRP----------------- 296

Query: 228 GIVGSDMLETAAANAGIV 245
                DM+ETAAANAGIV
Sbjct: 297 ---AYDMIETAAANAGIV 311

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235271|ref|XP_973061.2| PREDICTED: similar to Myocardin-related transcription factor CG32296-PA [Tribolium castaneum]

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/197 (56%), Positives = 126/197 (63%), Gaps = 42/197 (21%)

Query: 49  KTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRR 108
           KTP AFH QRRQLERAKTGD+LKAKIQ RP R EL R+HIL  D G   VDPSLAE+QR 
Sbjct: 112 KTPAAFHGQRRQLERAKTGDMLKAKIQQRPPRQELERRHILEADPG--HVDPSLAERQRM 169

Query: 109 LSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEPP 168
           L K RLADQLNDQL+HRPGPLELI+KNILHTEEPIE+AVK G I ++AT EGQ +RP+ P
Sbjct: 170 LKKARLADQLNDQLSHRPGPLELIQKNILHTEEPIEQAVKTGRIPYKATSEGQLNRPQHP 229

Query: 169 DHYMTLDDDSRSSEATSPPSLSGEAGGVRASSPPSLSEERERGGRRASSPTSLSEERERG 228
             Y+T +DDS+SSE                             G    SP          
Sbjct: 230 QSYVTPEDDSQSSE-----------------------------GDNIVSPGP-------- 252

Query: 229 IVGSDMLETAAANAGIV 245
              SD+LETAA +AGIV
Sbjct: 253 ---SDVLETAAKSAGIV 266

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
FB|FBgn0052296	1779	Mrtf "Myocardin-related transc	0.677	0.093	0.584	3.3e-43
UNIPROTKB|F1LVR8	928	Mkl1 "Protein Mkl1" [Rattus no	0.538	0.142	0.486	1.4e-26
UNIPROTKB|F1PTH1	928	MKL1 "Uncharacterized protein"	0.497	0.131	0.496	2.9e-26
UNIPROTKB|F1LV40	962	Mkl1 "Protein Mkl1" [Rattus no	0.534	0.136	0.483	5.4e-26
UNIPROTKB|F1SRA5	917	MKL1 "Uncharacterized protein"	0.534	0.142	0.483	5.8e-26
UNIPROTKB|B0QY83	881	MKL1 "MKL/myocardin-like prote	0.665	0.185	0.424	2.8e-25
UNIPROTKB|E7ER32	798	MKL1 "MKL/myocardin-like prote	0.693	0.213	0.412	7.9e-25
UNIPROTKB|E1C7F7	1093	MKL2 "Uncharacterized protein"	0.538	0.120	0.483	8.4e-25
RGD|1304873	570	Mkl1 "megakaryoblastic leukemi	0.534	0.229	0.483	9.3e-25
UNIPROTKB|Q969V6	931	MKL1 "MKL/myocardin-like prote	0.693	0.182	0.412	1.1e-24

FB|FBgn0052296 Mrtf "Myocardin-related transcription factor" [Drosophila melanogaster (taxid:7227)]

 Score = 457 (165.9 bits), Expect = 3.3e-43, Sum P(2) = 3.3e-43
 Identities = 104/178 (58%), Positives = 121/178 (67%)

Query:    22 LLKAFSKKLVSLKRLSAPRIPSSE-------KTLKTPPAFHAQRRQLERAKTGDLLKAKI 74
             L  A  K   SLK     R P S+        +LKT PA H Q +QLERAKT DLLKAKI
Sbjct:   347 LQPAMDKNKESLKVKLMVRRPHSQLVEQGIIPSLKTSPAIHEQCKQLERAKTSDLLKAKI 406

Query:    75 QARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKK 134
             Q RP R +L R HIL  DE    +DPSLAEKQR L K RLADQLN Q+ HRPGPLELIKK
Sbjct:   407 QQRPNREDLERLHILEEDEC--HIDPSLAEKQRMLKKARLADQLNSQIQHRPGPLELIKK 464

Query:   135 NILHTEEPIERAVKEGVIAFRATCEGQSSRPEPPDHYMTLDDDSRSSEATS---PPSL 189
             NILHTE+PIE+ VKEG+++F+AT EG  +RP+ P  Y+T DDDS SSE+ +   PP L
Sbjct:   465 NILHTEKPIEKIVKEGLVSFKATSEGLLTRPQHPHSYVTFDDDSLSSESDTRQTPPRL 522

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0008078 "mesodermal cell migration" evidence=IMP

GO:0033613 "activating transcription factor binding" evidence=IPI

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IPI

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IDA

GO:0007424 "open tracheal system development" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=NAS

GO:0051302 "regulation of cell division" evidence=IMP

GO:0071456 "cellular response to hypoxia" evidence=IMP

UNIPROTKB|F1LVR8 Mkl1 "Protein Mkl1" [Rattus norvegicus (taxid:10116)]

 Score = 294 (108.6 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
 Identities = 73/150 (48%), Positives = 97/150 (64%)

Query:    47 TLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQ 106
             TLK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL   E     +PSL  KQ
Sbjct:     3 TLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHIL---EETS-AEPSLQAKQ 58

Query:   107 RRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPE 166
              +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I       GQ + P+
Sbjct:    59 LKLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEALIV------GQVNYPK 108

Query:   167 PPDHYMTLDDDSRSSEATSPPS-LSGEAGG 195
               D   + D+DS  S+A SP    S E+ G
Sbjct:   109 VADS-SSFDEDS--SDALSPEQPASHESQG 135

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1PTH1 MKL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 290 (107.1 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
 Identities = 69/139 (49%), Positives = 92/139 (66%)

Query:    48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
             LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL   E     +PSL  KQ 
Sbjct:     4 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHIL---EETS-AEPSLQAKQL 59

Query:   108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
             +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I       GQ + P+ 
Sbjct:    60 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV------GQVNYPKV 109

Query:   168 PDHYMTLDDDSRSSEATSP 186
              D   + D+DS  S+A SP
Sbjct:   110 ADS-SSFDEDS--SDALSP 125

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1LV40 Mkl1 "Protein Mkl1" [Rattus norvegicus (taxid:10116)]

 Score = 289 (106.8 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
 Identities = 72/149 (48%), Positives = 96/149 (64%)

Query:    48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
             LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL   E     +PSL  KQ 
Sbjct:    38 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHIL---EETS-AEPSLQAKQL 93

Query:   108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
             +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I       GQ + P+ 
Sbjct:    94 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEALIV------GQVNYPKV 143

Query:   168 PDHYMTLDDDSRSSEATSPPS-LSGEAGG 195
              D   + D+DS  S+A SP    S E+ G
Sbjct:   144 ADS-SSFDEDS--SDALSPEQPASHESQG 169

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1SRA5 MKL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 291 (107.5 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
 Identities = 72/149 (48%), Positives = 96/149 (64%)

Query:    48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
             LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL   E     +PSL  KQ 
Sbjct:     4 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHIL---EETS-AEPSLQAKQL 59

Query:   108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
             +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I       GQ + P+ 
Sbjct:    60 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV------GQVNYPKV 109

Query:   168 PDHYMTLDDDSRSSEATSPPS-LSGEAGG 195
              D   + D+DS  S+A SP    S E+ G
Sbjct:   110 ADS-SSFDEDS--SDALSPEQPASHESQG 135

GO:0051145 "smooth muscle cell differentiation" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043522 "leucine zipper domain binding" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0000976 "transcription regulatory region sequence-specific DNA binding" evidence=IEA

UNIPROTKB|B0QY83 MKL1 "MKL/myocardin-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 298 (110.0 bits), Expect = 2.8e-25, P = 2.8e-25
 Identities = 79/186 (42%), Positives = 105/186 (56%)

Query:    48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
             LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL   E     +PSL  KQ 
Sbjct:     4 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHIL---EETS-AEPSLQAKQL 59

Query:   108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
             +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I       GQ + P+ 
Sbjct:    60 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV------GQVNYPKV 109

Query:   168 PDHYMTLDDDSRSSEATSP--PSLSGEAGGV----RAXXXXXXXXXXXXXXXXASSPTSL 221
              D   + D+DS  S+A SP  P+     G V     A                 S P S 
Sbjct:   110 ADS-SSFDEDS--SDALSPEQPASHESQGSVPSPLEARVSEPLLSATSASPTQQSQPKSA 166

Query:   222 SEERER 227
             SE+ +R
Sbjct:   167 SEKSQR 172

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E7ER32 MKL1 "MKL/myocardin-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
 Identities = 78/189 (41%), Positives = 107/189 (56%)

Query:    48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
             LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL   E     +PSL  KQ 
Sbjct:     4 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHIL---EETS-AEPSLQAKQL 59

Query:   108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
             +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I       GQ + P+ 
Sbjct:    60 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV------GQVNYPKV 109

Query:   168 PDHYMTLDDDSRSSEATSPPS-LSGEAGGVRAXXXXXXXXXXXXXXXXASSPTSLSEERE 226
              D   + D+DS  S+A SP    S E+ G                   ++SPT +  +  
Sbjct:   110 ADS-SSFDEDS--SDALSPEQPASHESQG-SVPSPLEARVSEPLLSATSASPTQVVSQLP 165

Query:   227 RGIVGSDML 235
              G    +ML
Sbjct:   166 MGRDSREML 174

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E1C7F7 MKL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 295 (108.9 bits), Expect = 8.4e-25, P = 8.4e-25
 Identities = 72/149 (48%), Positives = 98/149 (65%)

Query:    48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
             LK+P AFH Q + LERA+T + LK KI++RP R+ELVR HIL  +E   F +PSL   Q 
Sbjct:    64 LKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHIL--EET--FAEPSLQATQM 119

Query:   108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
             +L + RLAD LN+++A RPGP+EL++KNIL    P++ +VKE +IA      GQ S P+ 
Sbjct:   120 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVDSSVKEAIIAV-----GQESYPQA 170

Query:   168 PDHYMTLDDDSRSSEATSPPS-LSGEAGG 195
              D Y + D+DS  S+A SP    S E+ G
Sbjct:   171 LDDY-SFDEDS--SDALSPDQPASQESQG 196

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0003007 "heart morphogenesis" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0010467 "gene expression" evidence=IEA

GO:0045844 "positive regulation of striated muscle tissue development" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0048514 "blood vessel morphogenesis" evidence=IEA

GO:0048568 "embryonic organ development" evidence=IEA

GO:0048738 "cardiac muscle tissue development" evidence=IEA

GO:0051145 "smooth muscle cell differentiation" evidence=IEA

RGD|1304873 Mkl1 "megakaryoblastic leukemia (translocation) 1" [Rattus norvegicus (taxid:10116)]

 Score = 289 (106.8 bits), Expect = 9.3e-25, P = 9.3e-25
 Identities = 72/149 (48%), Positives = 96/149 (64%)

Query:    48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
             LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL   E     +PSL  KQ 
Sbjct:     3 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHIL---EETS-AEPSLQAKQL 58

Query:   108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
             +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I       GQ + P+ 
Sbjct:    59 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEALIV------GQVNYPKV 108

Query:   168 PDHYMTLDDDSRSSEATSPPS-LSGEAGG 195
              D   + D+DS  S+A SP    S E+ G
Sbjct:   109 ADS-SSFDEDS--SDALSPEQPASHESQG 134

GO:0000976 "transcription regulatory region sequence-specific DNA binding" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0003713 "transcription coactivator activity" evidence=ISO

GO:0003779 "actin binding" evidence=ISO

GO:0003785 "actin monomer binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043522 "leucine zipper domain binding" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0051145 "smooth muscle cell differentiation" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|Q969V6 MKL1 "MKL/myocardin-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 293 (108.2 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 78/189 (41%), Positives = 107/189 (56%)

Query:    48 LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
             LK+P AFH QRR LERA+T D LK KI++RP R+ELVR HIL   E     +PSL  KQ 
Sbjct:     4 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHIL---EETS-AEPSLQAKQL 59

Query:   108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAFRATCEGQSSRPEP 167
             +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I       GQ + P+ 
Sbjct:    60 KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV------GQVNYPKV 109

Query:   168 PDHYMTLDDDSRSSEATSPPS-LSGEAGGVRAXXXXXXXXXXXXXXXXASSPTSLSEERE 226
              D   + D+DS  S+A SP    S E+ G                   ++SPT +  +  
Sbjct:   110 ADS-SSFDEDS--SDALSPEQPASHESQG-SVPSPLEARVSEPLLSATSASPTQVVSQLP 165

Query:   227 RGIVGSDML 235
              G    +ML
Sbjct:   166 MGRDSREML 174

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0000976 "transcription regulatory region sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0003785 "actin monomer binding" evidence=ISS

GO:0043522 "leucine zipper domain binding" evidence=IPI

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0051145 "smooth muscle cell differentiation" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	245
pfam02755	26	pfam02755, RPEL, RPEL repeat	6e-04
smart00707	26	smart00707, RPEL, Repeat in Drosophila CG10860, hu	0.003

>gnl|CDD|202377 pfam02755, RPEL, RPEL repeat

 Score = 35.7 bits (84), Expect = 6e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 116 DQLNDQLAHRPGPLELIKKNILHTEE 141
           D L  +L+ RP   EL+++NIL  +E
Sbjct: 1   DSLERKLSQRPTREELVERNILKEDE 26

The RPEL repeat is named after four conserved amino acids it contains. The function of the RPEL repeat is unknown however it might be a DNA binding repeat based on the observation that the Drosophila myocardin-related transcription factor contains a pfam02037 domain that is also implicated in DNA binding. Length = 26

>gnl|CDD|128947 smart00707, RPEL, Repeat in Drosophila CG10860, human KIAA0680 and C

 Score = 34.0 bits (79), Expect = 0.003
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 116 DQLNDQLAHRPGPLELIKKNILHTEE 141
           D LN +L+ RP   EL ++NIL    
Sbjct: 1   DVLNRKLSQRPTREELEERNILKELS 26

elegans F26H9.2. Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
KOG4339|consensus	533		98.72
smart00707	26	RPEL Repeat in Drosophila CG10860, human KIAA0680	98.61
PF02755	26	RPEL: RPEL repeat; InterPro: IPR004018 The RPEL re	98.57
KOG4339|consensus	533		98.47
PF02755	26	RPEL: RPEL repeat; InterPro: IPR004018 The RPEL re	97.97
smart00707	26	RPEL Repeat in Drosophila CG10860, human KIAA0680	97.86

>KOG4339|consensus

Probab=98.72  E-value=3.2e-08  Score=97.25  Aligned_cols=111  Identities=23%  Similarity=0.297  Sum_probs=84.5

Q ss_pred             HHHhhhhhHHHHHhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHhhhhhHHHHHHhcCCChHHHHHhccccCCC
Q psy14900         14 LERAKTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDE   93 (245)
Q Consensus        14 Lerakt~d~Lk~kl~~Rp~~~eL~~~~i~~~~~~~k~apslqaqqk~LeRar~~D~Lk~kL~~RP~~~ELV~~nIL~~s~   93 (245)
                      +-+-...|.|--||++||+..+|...||   +      +--..-..+.-|+..+.+|.++|+.||.++||+++|||+.. 
T Consensus       369 a~Kv~RKDtLAlKL~nRPsKqELe~rNI---l------pr~tDeErkEiRqqIG~kLiRRLSqRPT~EELEqRNILK~k-  438 (533)
T KOG4339|consen  369 ASKVARKDTLALKLDNRPSKQELEDRNI---L------PRTTDEERKEIRQQIGTKLIRRLSQRPTPEELEQRNILKRK-  438 (533)
T ss_pred             HHHHhhhhhhhhhhcCCCchhhhhhccc---c------cccCHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhccc-
Confidence            3455678899999999999999999999   3      11112233455778999999999999999999999999875 


Q ss_pred             CCCCCCcchHHHHHHhHHhhHhhHHhhhhhcCCChhhHHhhCCCCCCchH
Q psy14900         94 GVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPI  143 (245)
Q Consensus        94 ~~s~vaPsLqa~q~kLkra~L~D~Ln~kL~~RP~P~ELV~knIL~~d~~v  143 (245)
                        .  ...=|... +-+|.+    |-.||+.||+..||.++-||..+.-|
T Consensus       439 --n--~~~eqe~k-~E~k~r----L~RKLs~RPTV~EL~~rkiirFndYv  479 (533)
T KOG4339|consen  439 --N--EAEEQEAK-EEKKRR----LLRKLSFRPTVAELKERKIIRFNDYV  479 (533)
T ss_pred             --C--hhhHHHHH-HHHHHH----HHHhhccCccHHHHhhhheeecccee
Confidence              1  22223333 333444    77899999999999999999887655

>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C

Probab=98.61  E-value=2.4e-08  Score=61.93  Aligned_cols=25  Identities=44%  Similarity=0.591  Sum_probs=23.2

Q ss_pred             hHHhhhhhcCCChhhHHhhCCCCCC
Q psy14900        116 DQLNDQLAHRPGPLELIKKNILHTE  140 (245)
Q Consensus       116 D~Ln~kL~~RP~P~ELV~knIL~~d  140 (245)
                      |.|++||++||+|+|||++|||+..
T Consensus         1 d~L~~kl~~RP~~eeLv~r~IL~~~   25 (26)
T smart00707        1 DVLNRKLSQRPTREELEERNILKEL   25 (26)
T ss_pred             ChHHHHHHcCCCHHHHHHccCCCCC
Confidence            6799999999999999999999864

elegans F26H9.2.

>PF02755 RPEL: RPEL repeat; InterPro: IPR004018 The RPEL repeat is named after four conserved amino acids it contains

Probab=98.57  E-value=3.4e-08  Score=61.20  Aligned_cols=26  Identities=42%  Similarity=0.744  Sum_probs=19.8

Q ss_pred             hHHhhhhhcCCChhhHHhhCCCCCCc
Q psy14900        116 DQLNDQLAHRPGPLELIKKNILHTEE  141 (245)
Q Consensus       116 D~Ln~kL~~RP~P~ELV~knIL~~d~  141 (245)
                      |.|+.||++||+++|||++|||+.++
T Consensus         1 D~L~~kl~~RP~~~eLv~r~IL~~~~   26 (26)
T PF02755_consen    1 DSLERKLSQRPTREELVERNILKEDE   26 (26)
T ss_dssp             HHHHHHHHT---HHHHHHTTSS-SS-
T ss_pred             ChHHHHHhcCCCHHHHHHcCCCCCCC
Confidence            68999999999999999999999764

The function of the RPEL repeat is unknown however it might be a DNA binding repeat based on the observation that Q9VZY2 from SWISSPROT contains a SAP domain that is also implicated in DNA binding.; PDB: 2YJE_M 2V52_M 2YJF_M 2V51_E.

>KOG4339|consensus

Probab=98.47  E-value=2.3e-07  Score=91.35  Aligned_cols=73  Identities=27%  Similarity=0.467  Sum_probs=62.0

Q ss_pred             HHHhhhhhHHHHHHhcCCChHHHHHhccccCCCCCCCCCcchHHHHHHhHHhhHhhHHhhhhhcCCChhhHHhhCCCCCC
Q psy14900         61 LERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTE  140 (245)
Q Consensus        61 LeRar~~D~Lk~kL~~RP~~~ELV~~nIL~~s~~~s~vaPsLqa~q~kLkra~L~D~Ln~kL~~RP~P~ELV~knIL~~d  140 (245)
                      +-|-...|+|--||.+||+..||..+|||+-.   +       -...+.-|+++...|.++|++||+++||+++|||...
T Consensus       369 a~Kv~RKDtLAlKL~nRPsKqELe~rNIlpr~---t-------DeErkEiRqqIG~kLiRRLSqRPT~EELEqRNILK~k  438 (533)
T KOG4339|consen  369 ASKVARKDTLALKLDNRPSKQELEDRNILPRT---T-------DEERKEIRQQIGTKLIRRLSQRPTPEELEQRNILKRK  438 (533)
T ss_pred             HHHHhhhhhhhhhhcCCCchhhhhhccccccc---C-------HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhhhccc
Confidence            44456678999999999999999999999864   1       1355677999999999999999999999999999876


Q ss_pred             chH
Q psy14900        141 EPI  143 (245)
Q Consensus       141 ~~v  143 (245)
                      ...
T Consensus       439 n~~  441 (533)
T KOG4339|consen  439 NEA  441 (533)
T ss_pred             Chh
Confidence            554

>PF02755 RPEL: RPEL repeat; InterPro: IPR004018 The RPEL repeat is named after four conserved amino acids it contains

Probab=97.97  E-value=5.7e-06  Score=51.31  Aligned_cols=25  Identities=48%  Similarity=0.728  Sum_probs=19.5

Q ss_pred             hHHHHHHhcCCChHHHHHhccccCC
Q psy14900         68 DLLKAKIQARPARTELVRQHILLGD   92 (245)
Q Consensus        68 D~Lk~kL~~RP~~~ELV~~nIL~~s   92 (245)
                      |.|++||++||+++|||++|||+.+
T Consensus         1 D~L~~kl~~RP~~~eLv~r~IL~~~   25 (26)
T PF02755_consen    1 DSLERKLSQRPTREELVERNILKED   25 (26)
T ss_dssp             HHHHHHHHT---HHHHHHTTSS-SS
T ss_pred             ChHHHHHhcCCCHHHHHHcCCCCCC
Confidence            6899999999999999999999864

The function of the RPEL repeat is unknown however it might be a DNA binding repeat based on the observation that Q9VZY2 from SWISSPROT contains a SAP domain that is also implicated in DNA binding.; PDB: 2YJE_M 2V52_M 2YJF_M 2V51_E.

>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C

Probab=97.86  E-value=1.1e-05  Score=50.12  Aligned_cols=24  Identities=42%  Similarity=0.668  Sum_probs=22.5

Q ss_pred             hHHHHHHhcCCChHHHHHhccccC
Q psy14900         68 DLLKAKIQARPARTELVRQHILLG   91 (245)
Q Consensus        68 D~Lk~kL~~RP~~~ELV~~nIL~~   91 (245)
                      |.|++||++||++.|||++|||+.
T Consensus         1 d~L~~kl~~RP~~eeLv~r~IL~~   24 (26)
T smart00707        1 DVLNRKLSQRPTREELEERNILKE   24 (26)
T ss_pred             ChHHHHHHcCCCHHHHHHccCCCC
Confidence            679999999999999999999975

elegans F26H9.2.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	245
2yje_M	137	Oligomeric Assembly Of Actin Bound To Mrtf-A Length		5e-24
3tpm_B	120	Crystal Structure Of Mal Rpel Domain In Complex Wit		3e-22
3tpq_M	117	Crystal Structure Of Wild-Type Mal Rpel Domain In C		7e-22
2yjf_M	137	Oligomeric Assembly Of Actin Bound To Mrtf-A Length		2e-21

>pdb|2YJE|M Chain M, Oligomeric Assembly Of Actin Bound To Mrtf-A Length = 137

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 8/106 (7%)
Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL         +PSL  KQ 
Sbjct: 34  LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETSA----EPSLQAKQL 89
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIA 153
           +L + RLAD LN+++A RPGP+EL++KNIL    P+E ++KE +I 
Sbjct: 90  KLKRARLADDLNEKIAQRPGPMELVEKNIL----PVESSLKEAIIV 131

>pdb|3TPM|B Chain B, Crystal Structure Of Mal Rpel Domain In Complex With Importin-Alpha Length = 120

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 68/93 (73%), Gaps = 4/93 (4%)
Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL  +E     +PSL  KQ 
Sbjct: 30  LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHIL--EETSA--EPSLQAKQL 85
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTE 140
           +L + RLAD LN+++A RPGP+EL++KNIL  E
Sbjct: 86  KLKRARLADDLNEKIAQRPGPMELVEKNILPVE 118

>pdb|3TPQ|M Chain M, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex With Five G- Actins Length = 117

Iteration: 1
 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL  +E     +PSL  KQ 
Sbjct: 30  LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHIL--EETSA--EPSLQAKQL 85
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNIL 137
           +L + RLAD LN+++A RPGP+EL++KNIL
Sbjct: 86  KLKRARLADDLNEKIAQRPGPMELVEKNIL 115

>pdb|2YJF|M Chain M, Oligomeric Assembly Of Actin Bound To Mrtf-A Length = 137

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 8/106 (7%)
Query: 48  LKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQR 107
           LK+P AFH QR  LERA+T D LK KI++RP R ELVR HIL         +PSL  KQ 
Sbjct: 34  LKSPAAFHEQRESLERARTEDYLKRKIRSRPERAELVRMHILEETSA----EPSLQAKQL 89
Query: 108 RLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIA 153
           +L + RLAD LN+++A RP  +EL++KNIL    P+E ++KE +I 
Sbjct: 90  KLKRARLADDLNEKIAQRPERMELVEKNIL----PVESSLKEAIIV 131

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	245
2yje_M	137	MKL/myocardin-like protein 1; motor protein; HET:	9e-27
2yje_M	137	MKL/myocardin-like protein 1; motor protein; HET:	1e-07
3tpm_B	120	MAL; nuclear import, protein transport-transcripti	1e-22
3tpm_B	120	MAL; nuclear import, protein transport-transcripti	4e-07

>2yje_M MKL/myocardin-like protein 1; motor protein; HET: LAB ATP; 3.10A {Mus musculus} PDB: 2yjf_M* Length = 137

 Score = 99.7 bits (248), Expect = 9e-27
 Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 4/109 (3%)

Query: 46  KTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEK 105
             LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL         +PSL  K
Sbjct: 32  PPLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETS----AEPSLQAK 87

Query: 106 QRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAF 154
           Q +L + RLAD LN+++A RPGP+EL++KNIL  E  ++ A+  G + +
Sbjct: 88  QLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEAIIVGQVNY 136

>2yje_M MKL/myocardin-like protein 1; motor protein; HET: LAB ATP; 3.10A {Mus musculus} PDB: 2yjf_M* Length = 137

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 61  LERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLND 120
              ++  ++L+ K+Q R  R ELV Q I+   +       +  E++R L + R  D L  
Sbjct: 3   GSLSERKNVLQLKLQQRRTREELVSQGIMPPLK----SPAAFHEQRRSLERARTEDYLKR 58

Query: 121 QLAHRPGPLELIKKNILHTEEP 142
           ++  RP   EL++ +IL     
Sbjct: 59  KIRSRPERAELVRMHILEETSA 80

>3tpm_B MAL; nuclear import, protein transport-transcription complex; 2.10A {Mus musculus} PDB: 3tpq_M* 2v51_E* Length = 120

 Score = 88.1 bits (218), Expect = 1e-22
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 4/96 (4%)

Query: 46  KTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEK 105
             LK+P AFH QRR LERA+T D LK KI++RP R ELVR HIL         +PSL  K
Sbjct: 28  PPLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEETS----AEPSLQAK 83

Query: 106 QRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEE 141
           Q +L + RLAD LN+++A RPGP+EL++KNIL  E 
Sbjct: 84  QLKLKRARLADDLNEKIAQRPGPMELVEKNILPVES 119

>3tpm_B MAL; nuclear import, protein transport-transcription complex; 2.10A {Mus musculus} PDB: 3tpq_M* 2v51_E* Length = 120

 Score = 46.9 bits (111), Expect = 4e-07
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 64  AKTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLA 123
           ++  ++L+ K+Q R  R ELV Q I+   +       +  E++R L + R  D L  ++ 
Sbjct: 2   SERKNVLQLKLQQRRTREELVSQGIMPPLK----SPAAFHEQRRSLERARTEDYLKRKIR 57

Query: 124 HRPGPLELIKKNILHTEEP 142
            RP   EL++ +IL     
Sbjct: 58  SRPERAELVRMHILEETSA 76

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	245
2yje_M	137	MKL/myocardin-like protein 1; motor protein; HET:	99.97
3tpm_B	120	MAL; nuclear import, protein transport-transcripti	99.96
4b1z_M	115	Phosphatase and actin regulator 1; structural prot	99.85
2yje_M	137	MKL/myocardin-like protein 1; motor protein; HET:	99.78
3tpm_B	120	MAL; nuclear import, protein transport-transcripti	99.76
4b1z_M	115	Phosphatase and actin regulator 1; structural prot	99.31
2v52_M	32	MKL/myocardin-like protein 1; structural protein/c	98.63
2v52_M	32	MKL/myocardin-like protein 1; structural protein/c	98.21
4b1v_M	32	Phosphatase and actin regulator 1; structural prot	87.96

>2yje_M MKL/myocardin-like protein 1; motor protein; HET: LAB ATP; 3.10A {Mus musculus} PDB: 2yjf_M*

Probab=99.97  E-value=2e-33  Score=232.43  Aligned_cols=131  Identities=44%  Similarity=0.702  Sum_probs=49.2

Q ss_pred             hhhhhHHHHHhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHhhhhhHHHHHHhcCCChHHHHHhccccCCCCCC
Q psy14900         17 AKTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVG   96 (245)
Q Consensus        17 akt~d~Lk~kl~~Rp~~~eL~~~~i~~~~~~~k~apslqaqqk~LeRar~~D~Lk~kL~~RP~~~ELV~~nIL~~s~~~s   96 (245)
                      ....+.|..+|.+||+..+|+..+|   +++.+++|+||+++++|++++++|.|+++|.+||++.+||++|||+++    
T Consensus         6 ~~rk~sL~~kL~~Rp~~~eL~~~~I---lp~~~~~ps~~~~~~~Ler~~~~d~L~~kL~~RP~~~eLv~rnIL~~~----   78 (137)
T 2yje_M            6 SERKNVLQLKLQQRRTREELVSQGI---MPPLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEET----   78 (137)
T ss_dssp             -CHHHHHHHHHHSCCCHHHHHHTTS---SCCSSSCSTTHHHHHHHHHHHHHHHHHC------------------------
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHcCC---CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHcCCCCCC----
Confidence            3567889999999999999999999   788999999999999999999999999999999999999999999985    


Q ss_pred             CCCcchHHHHHHhHHhhHhhHHhhhhhcCCChhhHHhhCCCCCCchHHHHHHhccccc
Q psy14900         97 FVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPIERAVKEGVIAF  154 (245)
Q Consensus        97 ~vaPsLqa~q~kLkra~L~D~Ln~kL~~RP~P~ELV~knIL~~d~~v~~alk~n~~~f  154 (245)
                      +++|+||+++++|+|+|++|+|++||++||+|+|||++|||+.+++|+++||+|+++|
T Consensus        79 ~~apslqa~q~eL~r~~~~d~L~~kL~~RP~~~eLve~nIL~~~~~v~~~i~~~~~~~  136 (137)
T 2yje_M           79 SAEPSLQAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEAIIVGQVNY  136 (137)
T ss_dssp             ----------------------------------------------------------
T ss_pred             CcChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHcCCCCCCccHHHHHhccCCCC
Confidence            7899999999999999999999999999999999999999999999999999999998

>3tpm_B MAL; nuclear import, protein transport-transcription complex; 2.10A {Mus musculus} PDB: 3tpq_M* 2v51_E*

Probab=99.96  E-value=6.6e-29  Score=201.30  Aligned_cols=117  Identities=48%  Similarity=0.725  Sum_probs=112.0

Q ss_pred             hhhHHHHHhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHhhhhhHHHHHHhcCCChHHHHHhccccCCCCCCCC
Q psy14900         19 TGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGFV   98 (245)
Q Consensus        19 t~d~Lk~kl~~Rp~~~eL~~~~i~~~~~~~k~apslqaqqk~LeRar~~D~Lk~kL~~RP~~~ELV~~nIL~~s~~~s~v   98 (245)
                      ..+.|+.+|++||++.+|+..+|   +|+++++++|+++++++++++++|+|+.+|.+||++.+|+++|||+++    ++
T Consensus         4 rk~~L~lkLq~Rr~r~qL~~qgI---lp~~~~~~~~~~~~~~l~r~~~~d~L~~kl~~RP~~~eL~~rnIL~~~----~~   76 (120)
T 3tpm_B            4 RKNVLQLKLQQRRTREELVSQGI---MPPLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHILEET----SA   76 (120)
T ss_pred             hHHHHHHHHhcCCCHHHHHHcCC---CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCccc----cc
Confidence            35789999999999999999999   788999999999999999999999999999999999999999999985    79


Q ss_pred             CcchHHHHHHhHHhhHhhHHhhhhhcCCChhhHHhhCCCCCCch
Q psy14900         99 DPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEP  142 (245)
Q Consensus        99 aPsLqa~q~kLkra~L~D~Ln~kL~~RP~P~ELV~knIL~~d~~  142 (245)
                      +|++|+++++|+|++++|+|++||++||+|+|||++|||++|++
T Consensus        77 ~p~lq~~~~~L~r~~~~d~L~~kl~~RP~~~eLv~~nIL~~d~~  120 (120)
T 3tpm_B           77 EPSLQAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESS  120 (120)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHcCCCCCCCC
Confidence            99999999999999999999999999999999999999999874

>4b1z_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP; 3.30A {Mus musculus}

Probab=99.85  E-value=1.3e-21  Score=157.49  Aligned_cols=107  Identities=23%  Similarity=0.285  Sum_probs=93.0

Q ss_pred             hhhhHHHHHhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHhhhhhHHHHHHhcCCChHHHHHhccccCCCCCCC
Q psy14900         18 KTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPARTELVRQHILLGDEGVGF   97 (245)
Q Consensus        18 kt~d~Lk~kl~~Rp~~~eL~~~~i~~~~~~~k~apslqaqqk~LeRar~~D~Lk~kL~~RP~~~ELV~~nIL~~s~~~s~   97 (245)
                      ...|.|..+|.+||+..+|+..+|   +|.      ....+.++++++++|+|+++|++||++++|+++|||++.   + 
T Consensus         6 ~RKdsL~~kL~~Rp~~~eLv~~~I---lp~------~s~~~~~~~r~~~~d~L~rkLs~RP~~eeL~qrnIL~~~---~-   72 (115)
T 4b1z_M            6 CRKDSLAIKLSNRPSKRELEEKNI---LPR------QTDEERLELRQQIGTKLTRRLSQRPTAEELEQRNILKPR---N-   72 (115)
T ss_dssp             CHHHHHHHHHTTCCCHHHHHHTTS---SCS------SCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHTTTSSCCS---C-
T ss_pred             HhHHHHHHHHhcCCCHHHHHhcCC---CCC------CChhHHHHHHHHHHHHHHHHHhcCCCHHHHHHcCCCCCC---C-
Confidence            457899999999999999999999   533      344567888999999999999999999999999999975   1 


Q ss_pred             CCcchHHHHHHhHHhhHhhHHhhhhhcCCChhhHHhhCCC-CCCchH
Q psy14900         98 VDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNIL-HTEEPI  143 (245)
Q Consensus        98 vaPsLqa~q~kLkra~L~D~Ln~kL~~RP~P~ELV~knIL-~~d~~v  143 (245)
                            +.+.+++|++++|.|++||++||||+|||++||| ..+.-|
T Consensus        73 ------~~~~~~~k~~l~~~L~~KLs~RP~~~EL~ek~ILi~f~~yv  113 (115)
T 4b1z_M           73 ------EQEEQEEKREIKRRLTRKLSQRPTVEELRERKILIRFSDYV  113 (115)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHSCCCHHHHHHTTCSCSTTSST
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHcCchhhhhccc
Confidence                  3467999999999999999999999999999998 665443

>2yje_M MKL/myocardin-like protein 1; motor protein; HET: LAB ATP; 3.10A {Mus musculus} PDB: 2yjf_M*

Probab=99.78  E-value=4e-20  Score=152.91  Aligned_cols=102  Identities=34%  Similarity=0.453  Sum_probs=23.0

Q ss_pred             CCChhhHHHHHHHHHhhhhhHHHHHhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHhhhhhHHHHHHhcCCChH
Q psy14900          2 KTPPAFHAQRRQLERAKTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPART   81 (245)
Q Consensus         2 k~~~afheqrk~Lerakt~d~Lk~kl~~Rp~~~eL~~~~i~~~~~~~k~apslqaqqk~LeRar~~D~Lk~kL~~RP~~~   81 (245)
                      +++++||+++++|+|++++|+|+++|.+||+..+|+..+|   ++...++|++++.+++|+|++++|.|+++|.+||++.
T Consensus        35 ~~~ps~~~~~~~Ler~~~~d~L~~kL~~RP~~~eLv~rnI---L~~~~~apslqa~q~eL~r~~~~d~L~~kL~~RP~~~  111 (137)
T 2yje_M           35 KSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHI---LEETSAEPSLQAKQLKLKRARLADDLNEKIAQRPGPM  111 (137)
T ss_dssp             SSCSTTHHHHHHHHHHHHHHHHHC--------------------------------------------------------
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHcCC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence            5789999999999999999999999999999999999999   6777888999999999999999999999999999999


Q ss_pred             HHHHhccccCCCCCCCCCcchHHHHHHh
Q psy14900         82 ELVRQHILLGDEGVGFVDPSLAEKQRRL  109 (245)
Q Consensus        82 ELV~~nIL~~s~~~s~vaPsLqa~q~kL  109 (245)
                      |||++|||+.+   +.|+.+|.+++..+
T Consensus       112 eLve~nIL~~~---~~v~~~i~~~~~~~  136 (137)
T 2yje_M          112 ELVEKNILPVE---SSLKEAIIVGQVNY  136 (137)
T ss_dssp             ----------------------------
T ss_pred             HHHHcCCCCCC---ccHHHHHhccCCCC
Confidence            99999999987   68999998887654

>3tpm_B MAL; nuclear import, protein transport-transcription complex; 2.10A {Mus musculus} PDB: 3tpq_M* 2v51_E*

Probab=99.76  E-value=1.2e-18  Score=141.16  Aligned_cols=89  Identities=39%  Similarity=0.532  Sum_probs=85.2

Q ss_pred             CCCChhhHHHHHHHHHhhhhhHHHHHhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHhhhhhHHHHHHhcCCCh
Q psy14900          1 LKTPPAFHAQRRQLERAKTGDLLKAFSKKLVSLKRLSAPRIPSSEKTLKTPPAFHAQRRQLERAKTGDLLKAKIQARPAR   80 (245)
Q Consensus         1 lk~~~afheqrk~Lerakt~d~Lk~kl~~Rp~~~eL~~~~i~~~~~~~k~apslqaqqk~LeRar~~D~Lk~kL~~RP~~   80 (245)
                      +|+|++||++++++++++++|+|++++.+||++.+|+..+|   ++...++|++++.+++|++++++|.|++||.+||++
T Consensus        30 ~~~~~~~~~~~~~l~r~~~~d~L~~kl~~RP~~~eL~~rnI---L~~~~~~p~lq~~~~~L~r~~~~d~L~~kl~~RP~~  106 (120)
T 3tpm_B           30 LKSPAAFHEQRRSLERARTEDYLKRKIRSRPERAELVRMHI---LEETSAEPSLQAKQLKLKRARLADDLNEKIAQRPGP  106 (120)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcC---CcccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            47899999999999999999999999999999999999999   677888999999999999999999999999999999


Q ss_pred             HHHHHhccccCC
Q psy14900         81 TELVRQHILLGD   92 (245)
Q Consensus        81 ~ELV~~nIL~~s   92 (245)
                      .|||++|||+.+
T Consensus       107 ~eLv~~nIL~~d  118 (120)
T 3tpm_B          107 MELVEKNILPVE  118 (120)
T ss_pred             HHHHHcCCCCCC
Confidence            999999999986

>4b1z_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP; 3.30A {Mus musculus}

Probab=99.31  E-value=3.6e-12  Score=102.40  Aligned_cols=69  Identities=28%  Similarity=0.423  Sum_probs=61.0

Q ss_pred             hhhhHHHHHHhcCCChHHHHHhccccCCCCCCCCCcchHHHHHHhHHhhHhhHHhhhhhcCCChhhHHhhCCCCCCchH
Q psy14900         65 KTGDLLKAKIQARPARTELVRQHILLGDEGVGFVDPSLAEKQRRLSKCRLADQLNDQLAHRPGPLELIKKNILHTEEPI  143 (245)
Q Consensus        65 r~~D~Lk~kL~~RP~~~ELV~~nIL~~s~~~s~vaPsLqa~q~kLkra~L~D~Ln~kL~~RP~P~ELV~knIL~~d~~v  143 (245)
                      ...|+|..+|.+||++.+||++|||+..   +       ..+..+.|+++.|.|+++|++||+++|||++|||+.+..-
T Consensus         6 ~RKdsL~~kL~~Rp~~~eLv~~~Ilp~~---s-------~~~~~~~r~~~~d~L~rkLs~RP~~eeL~qrnIL~~~~~~   74 (115)
T 4b1z_M            6 CRKDSLAIKLSNRPSKRELEEKNILPRQ---T-------DEERLELRQQIGTKLTRRLSQRPTAEELEQRNILKPRNEQ   74 (115)
T ss_dssp             CHHHHHHHHHTTCCCHHHHHHTTSSCSS---C-------HHHHHHHHHHHHHHHHHHHHHCCCHHHHHTTTSSCCSCHH
T ss_pred             HhHHHHHHHHhcCCCHHHHHhcCCCCCC---C-------hhHHHHHHHHHHHHHHHHHhcCCCHHHHHHcCCCCCCCHH
Confidence            3568999999999999999999999764   2       3567889999999999999999999999999999977654

>2v52_M MKL/myocardin-like protein 1; structural protein/contractIle protein, structural protein, contractIle protein, nucleotide-binding; HET: LAB ATP; 1.45A {Mus musculus}

Probab=98.63  E-value=9.3e-09  Score=65.66  Aligned_cols=30  Identities=60%  Similarity=0.836  Sum_probs=27.9

Q ss_pred             HhhhhhHHHHHHhcCCChHHHHHhccccCC
Q psy14900         63 RAKTGDLLKAKIQARPARTELVRQHILLGD   92 (245)
Q Consensus        63 Rar~~D~Lk~kL~~RP~~~ELV~~nIL~~s   92 (245)
                      |++++|.|+++|.+||++.|||+||||+++
T Consensus         1 r~k~~D~Lk~kl~~RPdR~eLV~~~IL~~s   30 (32)
T 2v52_M            1 RARTEDYLKRKIRSRPERAELVRMHILEET   30 (32)
T ss_dssp             CCSCSHHHHHHHHTCCCHHHHHHTTSSCCC
T ss_pred             CchHHHHHHHHHHcCCCHHHHHHhcCCCCC
Confidence            468999999999999999999999999975

>2v52_M MKL/myocardin-like protein 1; structural protein/contractIle protein, structural protein, contractIle protein, nucleotide-binding; HET: LAB ATP; 1.45A {Mus musculus}

Probab=98.21  E-value=4.3e-07  Score=57.98  Aligned_cols=30  Identities=30%  Similarity=0.538  Sum_probs=27.2

Q ss_pred             HhhHhhHHhhhhhcCCChhhHHhhCCCCCC
Q psy14900        111 KCRLADQLNDQLAHRPGPLELIKKNILHTE  140 (245)
Q Consensus       111 ra~L~D~Ln~kL~~RP~P~ELV~knIL~~d  140 (245)
                      |++..|.|+++|.+||...|||++|||+..
T Consensus         1 r~k~~D~Lk~kl~~RPdR~eLV~~~IL~~s   30 (32)
T 2v52_M            1 RARTEDYLKRKIRSRPERAELVRMHILEET   30 (32)
T ss_dssp             CCSCSHHHHHHHHTCCCHHHHHHTTSSCCC
T ss_pred             CchHHHHHHHHHHcCCCHHHHHHhcCCCCC
Confidence            456789999999999999999999999963

>4b1v_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP LAB; 1.75A {Mus musculus}

Probab=87.96  E-value=0.37  Score=30.18  Aligned_cols=25  Identities=28%  Similarity=0.430  Sum_probs=22.1

Q ss_pred             hHHhhhhhcCCChhhHHhhCCCCCC
Q psy14900        116 DQLNDQLAHRPGPLELIKKNILHTE  140 (245)
Q Consensus       116 D~Ln~kL~~RP~P~ELV~knIL~~d  140 (245)
                      .-|..||+.|-..+|||.+|+|.+.
T Consensus         6 ~vlerkis~rqsreelikrgvlke~   30 (32)
T 4b1v_M            6 AALERKISMRQSREELIKRGVLKEI   30 (32)
T ss_dssp             HHHHHHHHTCCCHHHHHHTTSCCCC
T ss_pred             HHHHHHHHhcccHHHHHHhhhhhhc
Confidence            3588899999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00