Psyllid ID: psy14913

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVREPGAAKYPSK
Secondary Structure (PSIPRED)
cccEEccccccccccEEcccccccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHcHHccHHHHccccEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccEEEEccccccccEEcccccccccEEEEEcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcHHHHccccEEEEccHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
gytyrypflhescginvvnknvqpLYKHLIniehpsmciigipgdTVVFYMFDLQVRFFLQLMKGYvtlpskaemlaDTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASmmrgespvppvLLKIYFESFARRCEDFTAFRKDKYKIINekvfvrepgaakypsk
Flexible Loop (DISEMBL)
GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRkesqsththvmhLRSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFrkdkykiinekvfvrepgaakypsk
Low Complexity Region (SEG)
GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVREPGAAKYPSK
Disordered region (IsUnstruct)
**TYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLP************************************************VPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR**********
Disordered Region (DISOPRED)
GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR**********
Disordered Region (DISEMBL)
GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTDQDIR************VMHLRSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVREPGAAKYPSK
Disordered Region (DISPRO)
GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVREPGAA*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVREPGAAKYPSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
Q9SS04	459	Flavin-containing monooxy	yes	N/A	0.638	0.230	0.353	9e-12
Q9SXE1	462	Flavin-containing monooxy	no	N/A	0.638	0.229	0.327	2e-11
Q9FWW9	465	Flavin-containing monooxy	no	N/A	0.475	0.169	0.4	2e-10
A8MRX0	459	Flavin-containing monooxy	no	N/A	0.656	0.237	0.319	2e-10
Q9FWW3	470	Flavin-containing monooxy	no	N/A	0.469	0.165	0.379	4e-10
Q93Y23	461	Flavin-containing monooxy	no	N/A	0.469	0.169	0.392	5e-10
Q8MP06	456	Senecionine N-oxygenase O	N/A	N/A	0.927	0.337	0.287	3e-09
Q9SXD9	464	Flavin-containing monooxy	no	N/A	0.451	0.161	0.381	5e-09
Q94BV5	452	Flavin-containing monooxy	no	N/A	0.644	0.236	0.316	8e-09
Q9FF12	460	Flavin-containing monooxy	no	N/A	0.512	0.184	0.337	8e-09

>sp|Q9SS04|GSOX1_ARATH Flavin-containing monooxygenase FMO GS-OX1 OS=Arabidopsis thaliana GN=FMOGS-OX1 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 10/116 (8%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHL-INIEHPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL  +  IN+    V+PLYKH+ +    PS+  IG+PG  + F MF++Q ++ 
Sbjct: 285 GYKYYFPFLETNGYININENRVEPLYKHVFLPALAPSLSFIGLPGMAIQFVMFEIQSKWV 344

Query: 60  LQLMKGYVTLPSKAEMLADTDQ-----DIRAHRKESQSTHTHVMHLRSEKYLNSLA 110
             ++ G V LPS+ +M+ D  +     D+    K     HTH +   S +YLN +A
Sbjct: 345 AAVLSGRVILPSQDKMMEDIIEWYATLDVLGIPKR----HTHKLGKISCEYLNWIA 396

Catalyzes the conversion of methylthioalkyl glucosinolates into methylsulfinylalkyl glucosinolates. Able to S-oxygenate both desulfo- and intact 4-methylthiobutyl glucosinolates, but no activity with methionine, dihomomethionine or 5-methylthiopentaldoxime.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 8EC: .EC: -EC: .EC: -

>sp|Q9SXE1|GSOX3_ARATH Flavin-containing monooxygenase FMO GS-OX3 OS=Arabidopsis thaliana GN=FMOGS-OX3 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 10/116 (8%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL  +  + +  K V+PLYKH+      P +  +G+P   +VF MF++Q ++ 
Sbjct: 286 GYKYNFPFLETNGYLRIDEKRVEPLYKHVFPPALAPGLAFVGLPAMGIVFVMFEIQSKWV 345

Query: 60  LQLMKGYVTLPSKAEMLADTDQDIRAHRKESQS-----THTHVMHLRSEKYLNSLA 110
             ++ G VTLPS  +M+    +DI A      +      HTH +     +YLN +A
Sbjct: 346 AAVLSGRVTLPSTDKMM----EDINAWYASLDALGIPKRHTHTIGRIQSEYLNWVA 397

Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates. Prefers probably short-chain methylthioalkyl glucosinolates in cv. Landsberg erecta.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: -

EC: .

EC: -

>sp|Q9FWW9|GSXL2_ARATH Flavin-containing monooxygenase FMO GS-OX-like 2 OS=Arabidopsis thaliana GN=At1g12200 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL     + V +  V PLYKH+      PS+  IG+P     F MF+LQ ++ 
Sbjct: 290 GYKYYFPFLDTKGEVTVDDNRVGPLYKHVFPPALAPSLSFIGLPWQITPFPMFELQSKWV 349

Query: 60  LQLMKGYVTLPSKAEMLADT 79
             ++ G V+LPS+ EM+ DT
Sbjct: 350 AAVLSGRVSLPSQDEMMEDT 369

Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: -

EC: .

EC: -

>sp|A8MRX0|GSOX5_ARATH Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana GN=FMOGS-OX5 PE=2 SV=2

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 10/119 (8%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL+ +  I V +  V PLY+H+      P +  IG+P  T+ F+MF+LQ ++ 
Sbjct: 285 GYKYHFPFLNTNGYITVEDNCVGPLYEHVFPPALAPGLSFIGLPWMTLQFFMFELQSKWV 344

Query: 60  LQLMKGYVTLPSKAEMLADTDQDIRAHRKESQS-----THTHVMHLRSEKYLNSLASMM 113
              + G VTLPS+ +M+    +D+ A+  + ++      +TH +      YLN +A  +
Sbjct: 345 AAALSGRVTLPSEEKMM----EDVTAYYAKREAFGQPKRYTHRLGGGQVDYLNWIAEQI 399

Catalyzes the conversion of methylthioalkyl glucosinolates into methylsulfinylalkyl glucosinolates. Specific for 8-methylthiooctyl (8-MTO) glucosinolates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: -

EC: .

EC: -

>sp|Q9FWW3|GSXL6_ARATH Flavin-containing monooxygenase FMO GS-OX-like 6 OS=Arabidopsis thaliana GN=At1g12130 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL     +NV +  V PLYKH+      P +  IG+P   + F+MF++Q R+ 
Sbjct: 285 GYKYCFPFLETKGYVNVEDNRVGPLYKHVFPPALAPGLSFIGLPSMALQFFMFEIQSRWV 344

Query: 60  LQLMKGYVTLPSKAEMLAD 78
             ++ G V LPS+ +M+ D
Sbjct: 345 ASVLSGRVKLPSEEQMMED 363

Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: -

EC: .

EC: -

>sp|Q93Y23|GSOX4_ARATH Flavin-containing monooxygenase FMO GS-OX4 OS=Arabidopsis thaliana GN=FMOGS-OX4 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL  +  + V +  V+PLYKH+      P +  IG+P   + FYMF++Q ++ 
Sbjct: 285 GYKYYFPFLETNNYMRVDDNRVEPLYKHIFPPALAPGLSFIGLPAMGLQFYMFEVQSKWV 344

Query: 60  LQLMKGYVTLPSKAEMLAD 78
             ++ G VTLPS  EM+ D
Sbjct: 345 AAVLSGRVTLPSVDEMMDD 363

Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: -

EC: .

EC: -

>sp|Q8MP06|SNO1_TYRJA Senecionine N-oxygenase OS=Tyria jacobaeae GN=sno1 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 1   GYTYRYPFLHE-SCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFF 59
           G+ Y +PFL   S GI      V PLY+ ++NI  P+M  +GI        + D Q  + 
Sbjct: 288 GFYYNHPFLSTLSSGITATENYVMPLYQQVVNINQPTMTFVGI-CKPFFAKLLDQQAHYS 346

Query: 60  LQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHL--RSEKYLNSLASMMRGES 117
            +L  G+  LPS+ +ML    + ++  R E+Q   T V  +    ++Y  +L     G  
Sbjct: 347 AKLAAGHFKLPSQDKMLRHWLEHVQMLR-EAQFKITDVNSVGPNVDEYFKALHKEA-GVP 404

Query: 118 PVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVRE 157
            +PPV   ++  S     ED   +R+  Y+II++  F ++
Sbjct: 405 LLPPVYASVFVFSGKTLLEDLQNYREYDYRIISDTQFKKK 444

NADPH-dependent monooxygenase that detoxifies senecionine and similar plant alkaloids that are ingested by the larvae. Is active towards a narrow range of related substrates with highest activity towards senecionine, followed by seneciphylline, retrorsine, monocrotaline, senecivernine, axillarine and axillaridine.

Tyria jacobaeae (taxid: 179666)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 0

EC: 1

>sp|Q9SXD9|GSXL7_ARATH Flavin-containing monooxygenase FMO GS-OX-like 7 OS=Arabidopsis thaliana GN=At1g62580 PE=2 SV=2

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL     + V +  V PLYKH+      P +  IG+P   + F MF+LQ ++ 
Sbjct: 287 GYKYYFPFLDTKGEVTVEDNRVGPLYKHVFPPALSPGLSFIGLPWQVIPFPMFELQSKWV 346

Query: 60  LQLMKGYVTLPSKAEM 75
             ++ G V+LPS+ EM
Sbjct: 347 AAVLAGRVSLPSQEEM 362

Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: -

EC: .

EC: -

>sp|Q94BV5|GSXL4_ARATH Flavin-containing monooxygenase FMO GS-OX-like 4 OS=Arabidopsis thaliana GN=At1g62600 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 10/117 (8%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL  +  + V +  V PLYK + +    P +  +GIP   V F MF+LQ ++ 
Sbjct: 290 GYKYHFPFLETNGNVTVDDNRVGPLYKDVFSPAFAPWLSFVGIPWKVVPFPMFELQSKWI 349

Query: 60  LQLMKGYVTLPSKAEMLAD-----TDQDIRAHRKESQSTHTHVMHLRSEKYLNSLAS 111
             ++ G + LPSK +M+ +     +  D +   K     +TH M +   +Y + LAS
Sbjct: 350 AGVLSGRIPLPSKEDMMMEIKTLYSTLDAQGIAKR----YTHQMGISQFEYNSWLAS 402

Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: -

EC: .

EC: -

>sp|Q9FF12|GSXL9_ARATH Flavin-containing monooxygenase FMO GS-OX-like 9 OS=Arabidopsis thaliana GN=At5g07800 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLIN-IEHPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY+Y++PFL     I V +  V PL++H       PS+  +GIP   + F  F+ Q ++ 
Sbjct: 297 GYSYKFPFLESKGRIEVDDDRVGPLFEHTFPPCLSPSLSFVGIPRKLIGFPFFEAQAKWI 356

Query: 60  LQLMKGYVTLPSKAEMLADTDQDIRA 85
            Q++ G  +LPS  +ML   D+  R+
Sbjct: 357 AQVLSGKSSLPSPDQMLQSVDEFYRS 382

Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 8

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
91095259	417	PREDICTED: similar to dimethylaniline mo	0.933	0.371	0.433	4e-32
193659748	444	PREDICTED: flavin-containing monooxygena	0.903	0.337	0.473	3e-31
380027061	419	PREDICTED: dimethylaniline monooxygenase	0.933	0.369	0.426	4e-30
193659750	448	PREDICTED: flavin-containing monooxygena	0.909	0.337	0.445	5e-30
91087519	421	PREDICTED: similar to AGAP010399-PA [Tri	0.939	0.370	0.417	1e-28
66500583	419	PREDICTED: flavin-containing monooxygena	0.933	0.369	0.407	2e-28
340709203	419	PREDICTED: flavin-containing monooxygena	0.933	0.369	0.407	3e-28
350425213	419	PREDICTED: flavin-containing monooxygena	0.933	0.369	0.407	3e-28
297206721	432	flavin-dependent monooxygenase FMO3 prec	0.963	0.370	0.432	5e-28
312371814	416	hypothetical protein AND_21611 [Anophele	0.927	0.370	0.410	1e-27

>gi|91095259|ref|XP_973683.1| PREDICTED: similar to dimethylaniline monooxygenase [Tribolium castaneum] gi|270017047|gb|EFA13493.1| hypothetical protein TcasGA2_TC016303 [Tribolium castaneum]

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 2/157 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GY Y +PFLHESCG+ V + ++QPLYKH+I+IE P+MC IGIP +   F MFDLQ RFF 
Sbjct: 260 GYRYSFPFLHESCGVTVDDNHIQPLYKHMIHIERPTMCFIGIPFNVCAFQMFDLQARFFC 319

Query: 61  QLMKGYVTLPSKAEMLADTDQDIRAHRKESQST-HTHVMHLRSEKYLNSLASMMRGESPV 119
           Q + G ++LPS   M  DT++D++    +  +    H+M    + Y   LA+     +P+
Sbjct: 320 QYLNGSMSLPSCNMMRMDTEKDMQNRWAKGYTKRQAHLMGPDQQGYYEDLAAAAN-TTPI 378

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR 156
            PV++K+  ES  R  +D   FR+D+YKI+N + FV+
Sbjct: 379 APVIVKLRDESVKRLYDDLLNFREDRYKIVNNETFVK 415

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193659748|ref|XP_001946449.1| PREDICTED: flavin-containing monooxygenase FMO GS-OX3-like [Acyrthosiphon pisum]

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 100/152 (65%), Gaps = 2/152 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GY Y+YPFL   CGI V N +V+PL+KH++NIEHP+M  IGIP +T  F M DLQV+F  
Sbjct: 271 GYNYKYPFLSPECGIRVENNHVKPLFKHVLNIEHPTMYFIGIPTNTAGFCMIDLQVQFAK 330

Query: 61  QLMKGYVTLPSKAEMLADTDQDIRAHRKES-QSTHTHVMHLRSEKYLNSLASMMRGESPV 119
             ++G + LPSK EM+ DT  D+        +    H+M  RS+ Y +SLAS+   ES V
Sbjct: 331 TFLEGRMKLPSKEEMIEDTRLDVELRLASGLRPKELHMMGRRSKDYYDSLASLSGLES-V 389

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINE 151
            PV+L+IYF+   R   DF+ FR+DKYK++++
Sbjct: 390 SPVVLQIYFDGIDRFMCDFSHFREDKYKLLDK 421

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027061|ref|XP_003697254.1| PREDICTED: dimethylaniline monooxygenase [N-oxide-forming] 2-like [Apis florea]

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 2/157 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GY Y +PFL E CG+ V +  V PL+KHLI+IE+P++ +IG+P     F MFDLQVRF L
Sbjct: 263 GYKYSFPFLSEKCGVRVDSNMVTPLWKHLISIENPTLALIGLPFYVCAFSMFDLQVRFVL 322

Query: 61  QLMKGYVTLPSKAEMLADTDQDIRAHRKES-QSTHTHVMHLRSEKYLNSLASMMRGESPV 119
           +   G    PSKA+ML +  Q++ + +KE  Q  H H+M  + ++Y N LA+   G +P+
Sbjct: 323 RYWSGKKDFPSKADMLKEETQELESRKKEGLQKKHFHMMGFKQDRYYNDLANTA-GITPL 381

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR 156
           PPVL K++ ES     +D   +R+ +YKII++  F++
Sbjct: 382 PPVLTKLHNESSLLFLDDLVHYREKRYKIIDDYNFIQ 418

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

>gi|193659750|ref|XP_001944207.1| PREDICTED: flavin-containing monooxygenase FMO GS-OX4-like [Acyrthosiphon pisum]

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 98/155 (63%), Gaps = 4/155 (2%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GYTY+YPFL   CGI V +  ++ L+KH+INIE+P+M  IG+P +T  FY+FDLQ R F 
Sbjct: 273 GYTYKYPFLSSECGIKVEDNVIKNLFKHMINIEYPTMGFIGVPRNTTGFYLFDLQSRIFK 332

Query: 61  QLMKGYVTLPSKAEMLADTDQDIR---AHRKESQSTHTHVMHLRSEKYLNSLASMMRGES 117
           ++++G V +PSK EML DT ++I    A  +  +  H       + +Y  S++     E 
Sbjct: 333 KILEGGVKMPSKEEMLQDTYKEIEDRLASGQRLKDLHALGKTKWAMEYYTSVSKFAGVEH 392

Query: 118 PVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEK 152
           P PPVLL+IYF+   R  EDF  FR DKY+II+ +
Sbjct: 393 P-PPVLLQIYFDGIGRLSEDFLNFRGDKYQIIDRE 426

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91087519|ref|XP_969340.1| PREDICTED: similar to AGAP010399-PA [Tribolium castaneum] gi|270010670|gb|EFA07118.1| hypothetical protein TcasGA2_TC010109 [Tribolium castaneum]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 2/158 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GY Y +PFLH  CG++V + +V+PLYKHLI+IE P+MC IGIP     F MFD+Q RF+ 
Sbjct: 261 GYRYNFPFLHHDCGVSVGDFHVRPLYKHLIHIEKPTMCFIGIPYYVGAFQMFDIQARFYC 320

Query: 61  QLMKGYVTLPSKAEMLADTDQDIRAHRKESQS-THTHVMHLRSEKYLNSLASMMRGESPV 119
           Q + G ++LP+K  M  DT++D+   + +  S    H++    + Y   LAS  +  +P+
Sbjct: 321 QYLNGSMSLPTKEMMYKDTEEDVVKRKNKGYSEKQMHLLGHDQQTYFEELASTAK-ITPI 379

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVRE 157
            PV+ KI+ +S     +D   FRK KY+I+N   FV E
Sbjct: 380 LPVICKIWSDSDNSFYKDLKNFRKYKYRILNNNTFVSE 417

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66500583|ref|XP_394164.2| PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 3-like [Apis mellifera]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 2/157 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GY Y +PFL E CG+ V +  V PL+KHLI+IE+P++ +IG+P     F MFDLQVRF L
Sbjct: 263 GYKYSFPFLSEKCGVRVDSNMVTPLWKHLISIENPTLALIGLPFYVCAFSMFDLQVRFVL 322

Query: 61  QLMKGYVTLPSKAEMLADTDQDIRAHRKES-QSTHTHVMHLRSEKYLNSLASMMRGESPV 119
           +   G    P KA+ML +  Q++ + +KE  +  H H+M  + ++Y + LA+   G +P+
Sbjct: 323 RYWSGKKDFPPKADMLKEEAQELESRKKEGLEKKHFHMMGFKQDRYYDDLANTA-GITPL 381

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR 156
           PPVL K++ ES     +D   +R+ +YKII++  F++
Sbjct: 382 PPVLTKLHNESSLLFLDDLVHYREKRYKIIDDYNFIQ 418

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709203|ref|XP_003393201.1| PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 3-like [Bombus terrestris]

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 97/157 (61%), Gaps = 2/157 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GY Y +PFL E CG+ V +  V PL+KHL++IE+P++ ++G+P     F MFDLQVRF L
Sbjct: 263 GYKYSFPFLSEKCGVRVDSNMVTPLWKHLVSIENPTLALVGLPFYVCAFSMFDLQVRFIL 322

Query: 61  QLMKGYVTLPSKAEMLADTDQDIRAHRKES-QSTHTHVMHLRSEKYLNSLASMMRGESPV 119
           Q   G    PSKA ML +  ++    RKE  +  H H+M  +   Y + LA+   G +P+
Sbjct: 323 QYWFGKKDFPSKANMLQEEAEEFENRRKEGLEKKHFHMMGFKQGHYYDDLANTA-GITPL 381

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR 156
           PPVL K++ ES  R  +D   +R+ +Y+II++  F++
Sbjct: 382 PPVLTKLHNESSTRFLDDLVHYRESRYRIIDDYNFIQ 418

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425213|ref|XP_003494048.1| PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 3-like [Bombus impatiens]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 97/157 (61%), Gaps = 2/157 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GY Y +PFL E CG+ V +  V PL+KHL++IE+P++ ++G+P     F MFDLQVRF L
Sbjct: 263 GYKYSFPFLSEKCGVRVDSNMVTPLWKHLVSIENPTLALVGLPFYVCAFSMFDLQVRFIL 322

Query: 61  QLMKGYVTLPSKAEMLADTDQDIRAHRKES-QSTHTHVMHLRSEKYLNSLASMMRGESPV 119
           Q   G    PSKA ML +  ++    RKE  +  H H+M  +   Y + LA+   G +P+
Sbjct: 323 QYWFGKKDFPSKANMLQEEAEEFENRRKEGLEKRHFHMMGFKQGHYYDDLANTA-GITPL 381

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR 156
           PPVL K++ ES  R  +D   +R+ +Y+II++  F++
Sbjct: 382 PPVLTKLHNESSTRFLDDLVHYRESRYRIIDDYNFIQ 418

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|297206721|ref|NP_001171913.1| flavin-dependent monooxygenase FMO3 precursor [Bombyx mori] gi|296427837|gb|ADH16750.1| flavin-dependent monooxygenase FMO3B [Bombyx mori]

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 100/164 (60%), Gaps = 4/164 (2%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           GY Y +PFLHESC I+V +  V+PLYKHL+NI HP+MC IG+P     F MFDLQVR+++
Sbjct: 271 GYLYNFPFLHESCNISVEDNCVEPLYKHLVNIHHPTMCFIGVPYYVCAFSMFDLQVRYYI 330

Query: 61  QLMKGYVTLPSKAEMLADTDQD--IRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
           + + G  +LPS  EM+A  +++   RA R  ++    H+M    EKY  SLA+   G   
Sbjct: 331 RSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKR-QAHMMGPDQEKYYASLATEA-GTKS 388

Query: 119 VPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVREPGAAK 162
           +P VL KI  ES  R   +   +R+D YKII++  +     AA+
Sbjct: 389 LPSVLTKIREESSIRFLHNLKHYRQDVYKIIDDNTYEIVNDAAR 432

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312371814|gb|EFR19906.1| hypothetical protein AND_21611 [Anopheles darlingi]

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 94/156 (60%), Gaps = 2/156 (1%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
           G+ Y +PFL + CGI V + +VQPLYKH INI HP+M  IG+P       M DLQVRF L
Sbjct: 260 GFRYSFPFLGDDCGIRVEDNHVQPLYKHCININHPTMAFIGLPYYVCAAQMMDLQVRFCL 319

Query: 61  QLMKGYVTLPSKAEMLADTDQDIRAH-RKESQSTHTHVMHLRSEKYLNSLASMMRGESPV 119
           +   G   LP+++EMLAD ++++ A  R+  +  H H+M     +Y + LA    G  P+
Sbjct: 320 EFFAGRRCLPTRSEMLADMEREMGARWRRGYKRRHAHMMGPDQGQYYDDLAQTA-GIKPI 378

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFV 155
            PV+ K++ ES  R  +D   FR D + I++++ FV
Sbjct: 379 APVMTKLHNESSQRFVDDLIHFRDDVFAIVDDETFV 414

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
FB|FBgn0033079	429	Fmo-2 "Flavin-containing monoo	0.933	0.361	0.341	2.3e-21
FB|FBgn0034943	416	Fmo-1 "Flavin-containing monoo	0.933	0.372	0.343	2.7e-19
ZFIN|ZDB-GENE-031010-24	449	zgc:77439 "zgc:77439" [Danio r	0.897	0.331	0.311	4.2e-15
TAIR|locus:2009754	459	FMO GS-OX1 "AT1G65860" [Arabid	0.963	0.348	0.308	3e-12
TAIR|locus:2203891	462	FMO GS-OX3 "AT1G62560" [Arabid	0.650	0.233	0.342	1.3e-11
UNIPROTKB|Q8MP06	456	sno1 "Senecionine N-oxygenase"	0.927	0.337	0.287	7.5e-11
TAIR|locus:2201981	470	AT1G12130 "AT1G12130" [Arabido	0.891	0.314	0.275	8e-11
TAIR|locus:2201971	459	FMO GS-OX5 "flavin-monooxygena	0.704	0.254	0.333	1.3e-10
TAIR|locus:2203901	461	FMO GS-OX4 "AT1G62570" [Arabid	0.674	0.242	0.315	2.7e-10
TAIR|locus:2201991	465	FMO "AT1G12200" [Arabidopsis t	0.662	0.236	0.353	3.5e-10

FB|FBgn0033079 Fmo-2 "Flavin-containing monooxygenase 2" [Drosophila melanogaster (taxid:7227)]

 Score = 254 (94.5 bits), Expect = 2.3e-21, P = 2.3e-21
 Identities = 54/158 (34%), Positives = 88/158 (55%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
             GY Y +P L    G+ V++  VQPL+KH INI HP+M  +G+P + +  ++FD+QVRF L
Sbjct:   267 GYKYTFPCLSTDVGVQVIDNFVQPLWKHCININHPTMAFVGLPFNVIPTHIFDMQVRFTL 326

Query:    61 QLMKGYVTLPSKAEMLADTDQDI--RAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
             +   G    PS+ +M+AD +Q+I  R           H M  R   Y N LAS+  G   
Sbjct:   327 KFFTGQRKFPSREQMIADLEQEIGERWGCGVRNQKKAHQMGERQFVYYNELASIA-GIEN 385

Query:   119 VPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR 156
             + PV+ K+  +   +   +   +R +KY I++++ F++
Sbjct:   386 IKPVIHKLMKDCGKKYIFELDTYRSNKYTILDDENFLK 423

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=ISS;NAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0004497 "monooxygenase activity" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

FB|FBgn0034943 Fmo-1 "Flavin-containing monooxygenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 235 (87.8 bits), Expect = 2.7e-19, P = 2.7e-19
 Identities = 54/157 (34%), Positives = 82/157 (52%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
             GY Y +PFL    GI V +  VQ LYK  INI +PSM +IG+P       M D+Q RF +
Sbjct:   259 GYKYAFPFLTVDSGIYVEDNYVQELYKQCINIRNPSMALIGLPFYVCAAQMMDIQARFIM 318

Query:    61 QLMKGYVTLPSKAEMLADT-DQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPV 119
                 G   LPS  +ML DT D+  +   +  +  H H++  +   Y   L S   G   +
Sbjct:   319 SYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDL-SQTAGVKNI 377

Query:   120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR 156
              PV+ K++ ES     E+   FR+D + I++++ F++
Sbjct:   378 KPVMTKLHNESSKCFNENLLHFREDNFAILDDETFIK 414

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=ISS

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0004497 "monooxygenase activity" evidence=IDA

ZFIN|ZDB-GENE-031010-24 zgc:77439 "zgc:77439" [Danio rerio (taxid:7955)]

 Score = 198 (74.8 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 47/151 (31%), Positives = 76/151 (50%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFL 60
             GY + +PFL E  G+ V    V PLYK LI   +PS+ I+GI      F  F +Q +F L
Sbjct:   276 GYNFTFPFLDEKVGVKVQEHLVWPLYKFLIPPAYPSLFIVGICRAICPFPHFHIQSQFVL 335

Query:    61 QLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYL-NSLASMMRGESPV 119
              ++ G   LPS+ +M  D + DI A R    +T  H++ L SE++  N   + + G  P+
Sbjct:   336 SVLDGSFRLPSREDMEKDIELDIAARRARGIATR-HILKLDSEQWAYNDELAHLGGFKPL 394

Query:   120 PPVLLKIYFESFARRCEDFTAFRKDKYKIIN 150
             P     +Y  +   R  D   ++   + +++
Sbjct:   395 PRYWSNLYESNKVFRARDMLNYKTHNFTVLD 425

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0042221 "response to chemical stimulus" evidence=IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0004497 "monooxygenase activity" evidence=IEA

TAIR|locus:2009754 FMO GS-OX1 "AT1G65860" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 3.0e-12, P = 3.0e-12
 Identities = 54/175 (30%), Positives = 85/175 (48%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHL-INIEHPSMCIIGIPGDTVVFYMFDLQVRFF 59
             GY Y +PFL  +  IN+    V+PLYKH+ +    PS+  IG+PG  + F MF++Q ++ 
Sbjct:   285 GYKYYFPFLETNGYININENRVEPLYKHVFLPALAPSLSFIGLPGMAIQFVMFEIQSKWV 344

Query:    60 LQLMKGYVTLPSKAEMLADTDQ-----DIRAHRKESQSTHTHVMHLRSEKYLNSLASMMR 114
               ++ G V LPS+ +M+ D  +     D+    K     HTH +   S +YLN +A    
Sbjct:   345 AAVLSGRVILPSQDKMMEDIIEWYATLDVLGIPKR----HTHKLGKISCEYLNWIAEECH 400

Query:   115 GESPVPPVLLKIYFESFARRCEDFTAFRK--DKYKIINE--KVFVREPGAAKYPS 165
               SPV    ++     F R       +R   D   ++ E  K F R+   + +PS
Sbjct:   401 C-SPVENWRIQEVERGFQRMVSHPEIYRDEWDDDDLMEEAYKDFARKKLISSHPS 454

GO:0004497 "monooxygenase activity" evidence=ISS

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0033506 "glucosinolate biosynthetic process from homomethionine" evidence=IMP

GO:0080102 "3-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP

GO:0080103 "4-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP;IDA

GO:0080104 "5-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP

GO:0080105 "6-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP

GO:0080106 "7-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP

GO:0080107 "8-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP;IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2203891 FMO GS-OX3 "AT1G62560" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 39/114 (34%), Positives = 64/114 (56%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
             GY Y +PFL  +  + +  K V+PLYKH+      P +  +G+P   +VF MF++Q ++ 
Sbjct:   286 GYKYNFPFLETNGYLRIDEKRVEPLYKHVFPPALAPGLAFVGLPAMGIVFVMFEIQSKWV 345

Query:    60 LQLMKGYVTLPSKAEMLADTDQ---DIRAHRKESQSTHTHVMHLRSEKYLNSLA 110
               ++ G VTLPS  +M+ D +     + A     + THT +  ++SE YLN +A
Sbjct:   346 AAVLSGRVTLPSTDKMMEDINAWYASLDALGIPKRHTHT-IGRIQSE-YLNWVA 397

GO:0004497 "monooxygenase activity" evidence=ISS

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA;IMP

GO:0080102 "3-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP

GO:0080103 "4-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP;IDA

GO:0080104 "5-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP

GO:0080105 "6-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP

GO:0080106 "7-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP

GO:0080107 "8-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP;IDA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

UNIPROTKB|Q8MP06 sno1 "Senecionine N-oxygenase" [Tyria jacobaeae (taxid:179666)]

 Score = 159 (61.0 bits), Expect = 7.5e-11, P = 7.5e-11
 Identities = 46/160 (28%), Positives = 77/160 (48%)

Query:     1 GYTYRYPFLHE-SCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFF 59
             G+ Y +PFL   S GI      V PLY+ ++NI  P+M  +GI        + D Q  + 
Sbjct:   288 GFYYNHPFLSTLSSGITATENYVMPLYQQVVNINQPTMTFVGICKPFFA-KLLDQQAHYS 346

Query:    60 LQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHL--RSEKYLNSLASMMRGES 117
              +L  G+  LPS+ +ML    + ++  R E+Q   T V  +    ++Y  +L     G  
Sbjct:   347 AKLAAGHFKLPSQDKMLRHWLEHVQMLR-EAQFKITDVNSVGPNVDEYFKALHKEA-GVP 404

Query:   118 PVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVRE 157
              +PPV   ++  S     ED   +R+  Y+II++  F ++
Sbjct:   405 LLPPVYASVFVFSGKTLLEDLQNYREYDYRIISDTQFKKK 444

GO:0009820 "alkaloid metabolic process" evidence=IDA

GO:0033784 "senecionine N-oxygenase activity" evidence=IDA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

TAIR|locus:2201981 AT1G12130 "AT1G12130" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 8.0e-11, P = 8.0e-11
 Identities = 43/156 (27%), Positives = 73/156 (46%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
             GY Y +PFL     +NV +  V PLYKH+      P +  IG+P   + F+MF++Q R+ 
Sbjct:   285 GYKYCFPFLETKGYVNVEDNRVGPLYKHVFPPALAPGLSFIGLPSMALQFFMFEIQSRWV 344

Query:    60 LQLMKGYVTLPSKAEMLADTDQDIRAHRK-ESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
               ++ G V LPS+ +M+ D    I  + K +S        H  ++     +   ++    
Sbjct:   345 ASVLSGRVKLPSEEQMMEDV---IAFYAKLKSLGIPKRFTHFLTDPQWTPMFEKLKPHEA 401

Query:   119 VPPVLLKIYFESFARRC--EDFTAFRKDKYKIINEK 152
             V  +    YF   A +C       +R+++Y I  +K
Sbjct:   402 VL-ISQSEYFNWIAEQCGCSSIERWREEQYNIAIKK 436

GO:0004497 "monooxygenase activity" evidence=ISS

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

TAIR|locus:2201971 FMO GS-OX5 "flavin-monooxygenase glucosinolate S-oxygenase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 40/120 (33%), Positives = 61/120 (50%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
             GY Y +PFL+ +  I V +  V PLY+H+      P +  IG+P  T+ F+MF+LQ ++ 
Sbjct:   285 GYKYHFPFLNTNGYITVEDNCVGPLYEHVFPPALAPGLSFIGLPWMTLQFFMFELQSKWV 344

Query:    60 LQLMKGYVTLPSKAEMLADTDQDIRAHRKESQ-STHTHVMHLRSEKYLNSLASMMRGESP 118
                + G VTLPS+ +M+ D            Q   +TH +      YLN +A  + G  P
Sbjct:   345 AAALSGRVTLPSEEKMMEDVTAYYAKREAFGQPKRYTHRLGGGQVDYLNWIAEQI-GAPP 403

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004497 "monooxygenase activity" evidence=ISS

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=IMP

GO:0080107 "8-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IMP;IDA

TAIR|locus:2203901 FMO GS-OX4 "AT1G62570" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 36/114 (31%), Positives = 58/114 (50%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
             GY Y +PFL  +  + V +  V+PLYKH+      P +  IG+P   + FYMF++Q ++ 
Sbjct:   285 GYKYYFPFLETNNYMRVDDNRVEPLYKHIFPPALAPGLSFIGLPAMGLQFYMFEVQSKWV 344

Query:    60 LQLMKGYVTLPSKAEMLADTDQDIRAHRKES-QSTHTHVMHLRSEKYLNSLASM 112
               ++ G VTLPS  EM+ D                +TH +     +YL+ +A +
Sbjct:   345 AAVLSGRVTLPSVDEMMDDLKLSYETQEALGIPKRYTHKLGKSQCEYLDWIADL 398

GO:0004497 "monooxygenase activity" evidence=ISS

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=IMP

GO:0080103 "4-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IDA

GO:0080107 "8-methylthiopropyl glucosinolate S-oxygenase activity" evidence=IDA

TAIR|locus:2201991 FMO "AT1G12200" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 40/113 (35%), Positives = 59/113 (52%)

Query:     1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
             GY Y +PFL     + V +  V PLYKH+      PS+  IG+P     F MF+LQ ++ 
Sbjct:   290 GYKYYFPFLDTKGEVTVDDNRVGPLYKHVFPPALAPSLSFIGLPWQITPFPMFELQSKWV 349

Query:    60 LQLMKGYVTLPSKAEMLADTDQDI-RAHRKESQSTHTHVMHLRSE-KYLNSLA 110
               ++ G V+LPS+ EM+ DT     +         +TH+M   S+ +Y N LA
Sbjct:   350 AAVLSGRVSLPSQDEMMEDTKAFYDKLEASGIPKRYTHLMPDDSQFEYDNWLA 402

GO:0004497 "monooxygenase activity" evidence=ISS

GO:0004499 "N,N-dimethylaniline monooxygenase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	166
PLN02172	461	PLN02172, PLN02172, flavin-containing monooxygenas	3e-15
pfam00743	532	pfam00743, FMO-like, Flavin-binding monooxygenase-	7e-10

>gnl|CDD|215116 PLN02172, PLN02172, flavin-containing monooxygenase FMO GS-OX

 Score = 71.8 bits (176), Expect = 3e-15
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 14/128 (10%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE-HPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY Y +PFL  +  + +    V+PLYKH+      P +  IG+P   + F MF++Q ++ 
Sbjct: 285 GYKYHFPFLETNGYMRIDENRVEPLYKHVFPPALAPGLSFIGLPAMGIQFVMFEIQSKWV 344

Query: 60  LQLMKGYVTLPSKAEMLADTDQDIRAHRKESQS-----THTHVMHLRSEKYLNSLASMMR 114
             ++ G VTLPS+ +M+    +DI A     ++      +TH +     +YLN +A    
Sbjct: 345 AAVLSGRVTLPSEDKMM----EDINAWYASLEALGIPKRYTHKLGKIQSEYLNWIAE--- 397

Query: 115 GESPVPPV 122
            E   P V
Sbjct: 398 -ECGCPLV 404

Length = 461

>gnl|CDD|109787 pfam00743, FMO-like, Flavin-binding monooxygenase-like

 Score = 56.4 bits (136), Expect = 7e-10
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 5/128 (3%)

Query: 1   GYTYRYPFLHESCGINVVNKNVQPLYKHLI--NIEHPSMCIIGIPGDT-VVFYMFDLQVR 57
           GYT+ +PFL ES  + V    +  LYK++   N+E P++ IIG+      +    +LQ R
Sbjct: 329 GYTFSFPFLEESL-VKVETNKIS-LYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQAR 386

Query: 58  FFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGES 117
           + +++ KG   LPS ++M+ +  +      K    + +  +      Y++ LA+ +  + 
Sbjct: 387 WAVRVFKGLCKLPSSSKMMEEITEKKEKKIKRFGFSQSSTIQTDYIAYMDELAAFIGAKP 446

Query: 118 PVPPVLLK 125
            +P + L 
Sbjct: 447 NLPSLFLT 454

This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases. Length = 532

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
PF00743	531	FMO-like: Flavin-binding monooxygenase-like; Inter	100.0
PLN02172	461	flavin-containing monooxygenase FMO GS-OX	100.0
KOG1399|consensus	448		99.78

>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []

Probab=100.00  E-value=4.2e-38  Score=268.96  Aligned_cols=156  Identities=28%  Similarity=0.479  Sum_probs=79.8

Q ss_pred             CcccccCCCCCCCCceecCCccccccccccccC--CCCeeEeecccccc-hhhHHHHHHHHHHHHHcCCCCCCCHHHHhH
Q psy14913          1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIE--HPSMCIIGIPGDTV-VFYMFDLQVRFFLQLMKGYVTLPSKAEMLA   77 (166)
Q Consensus         1 GY~~~fPFL~~~~~l~~~~~~v~~Ly~~if~~~--~PsLaFiG~~~~~~-~~~~~ElQA~~~a~~~~G~~~LPs~~em~~   77 (166)
                      ||+++||||++++ +...++.+ +||||||||+  +|||||||++++.+ +||++|+||||+|+||+|+.+||++++|++
T Consensus       329 GY~~~fpFL~~~~-~~~~~~~~-~LYk~vfp~~~~~ptLafIG~~~~~g~~fp~~ElQArw~a~v~sG~~~LPs~~~M~~  406 (531)
T PF00743_consen  329 GYKFSFPFLDESL-IKVDDNRV-RLYKHVFPPNLDHPTLAFIGLVQPFGSIFPIFELQARWAARVFSGRVKLPSKEEMME  406 (531)
T ss_dssp             -EE---TTB-TTT-T-S-SSSS-SEETTTEETETTSTTEEESS-SBSSS-HHHHHHHHHHHHHHHHTTSS----HHHHHH
T ss_pred             ccccccccccccc-cccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999886 55556667 7999999985  69999999999874 799999999999999999999999999999


Q ss_pred             hHHHHHHHHhhcCCCCcceecccchHHHHHHHHHHhcCCCCChHHHHH-HHHhHHHHHhhhcCCCCCCceEecCCCcccc
Q psy14913         78 DTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPVPPVLLK-IYFESFARRCEDFTAFRKDKYKIINEKVFVR  156 (166)
Q Consensus        78 ~~~~~~~~~~~~~~~r~~h~~~~~~~~Y~~~L~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~yrl~~~~~~~~  156 (166)
                      +++++.+++.+++.....|...+++..|+|+||+++ |+.|   ..++ +++||.+++..+|||+.|++|||+|||+|++
T Consensus       407 ~i~~~~~~~~~~~~~~~~~~~~~d~~~y~deLA~~i-G~~P---~~~~l~~~dp~l~~~~~~gp~~p~~YRL~Gpg~w~g  482 (531)
T PF00743_consen  407 EIEEEQEWRAKRFGFSPRHTIQVDYIDYMDELAREI-GCKP---NFWKLFLTDPKLARKLYFGPCTPYQYRLFGPGKWPG  482 (531)
T ss_dssp             HHHHHHHHHHT--SHHHHHHHHHHHHHHHHTTS-----------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccc-cccc---cccccccccccccccccccccccccccccccccccc
Confidence            999887766555422223446789999999999999 9988   3333 4589999999999999999999999999999


Q ss_pred             cccccc
Q psy14913        157 EPGAAK  162 (166)
Q Consensus       157 ~~~~~~  162 (166)
                      |++||.
T Consensus       483 ar~ail  488 (531)
T PF00743_consen  483 AREAIL  488 (531)
T ss_dssp             ------
T ss_pred             cccccc
Confidence            999994

Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....

>PLN02172 flavin-containing monooxygenase FMO GS-OX

Probab=100.00  E-value=1.4e-33  Score=237.95  Aligned_cols=163  Identities=25%  Similarity=0.419  Sum_probs=141.8

Q ss_pred             CcccccCCCCCCCCceecCCccccccccccccCC-CCeeEeecccccchhhHHHHHHHHHHHHHcCCCCCCCHHHHhHhH
Q psy14913          1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEH-PSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADT   79 (166)
Q Consensus         1 GY~~~fPFL~~~~~l~~~~~~v~~Ly~~if~~~~-PsLaFiG~~~~~~~~~~~ElQA~~~a~~~~G~~~LPs~~em~~~~   79 (166)
                      ||+++||||+....+.++++++.+||+|||+|+. |||+|||++..+++|+++|+||+|+|++|+|+.+|||.++|++++
T Consensus       285 Gy~~~~pfL~~~~~i~v~~~~v~~Ly~~~f~~~~~p~LafiG~~~~~~~f~~~E~Qa~~~a~v~sG~~~LPs~~~m~~~~  364 (461)
T PLN02172        285 GYKYHFPFLETNGYMRIDENRVEPLYKHVFPPALAPGLSFIGLPAMGIQFVMFEIQSKWVAAVLSGRVTLPSEDKMMEDI  364 (461)
T ss_pred             cCCccccccCcccceeeCCCcchhhHHhhcCCCCCCcEEEEeccccccCchhHHHHHHHHHHHHcCCCCCcCHHHHHHHH
Confidence            8999999998654366788889899999999974 999999999777899999999999999999999999999999999


Q ss_pred             HHHHHHHhhcC-CCCcceecccchHHHHHHHHHHhcCCCCChHHHHHHHHhHHHHHhhhcCCCCCC----ceEecCCCcc
Q psy14913         80 DQDIRAHRKES-QSTHTHVMHLRSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFRKD----KYKIINEKVF  154 (166)
Q Consensus        80 ~~~~~~~~~~~-~~r~~h~~~~~~~~Y~~~L~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~yrl~~~~~~  154 (166)
                      +++.+.+...| ++|++|.+...+.+|+|+|++.+ |+.|.++|+++|+......+..+...||+.    ++++.+.+.+
T Consensus       365 ~~~~~~~~~~g~~~r~~h~~~~~~~~y~~~la~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~  443 (461)
T PLN02172        365 NAWYASLEALGIPKRYTHKLGKIQSEYLNWIAEEC-GCPLVEHWRYQEVDRGYQRLVSQPETYRDEWDDDDLMEEAYEDF  443 (461)
T ss_pred             HHHHHHHHhcCCCCceeEEcCccHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHhCHHhhccccccccceeeccccc
Confidence            99888766667 77889988778999999999999 999999999999999999999999999998    7777776665


Q ss_pred             ccccccccCC
Q psy14913        155 VREPGAAKYP  164 (166)
Q Consensus       155 ~~~~~~~~~~  164 (166)
                      .+..----+|
T Consensus       444 ~~~~~~~~~~  453 (461)
T PLN02172        444 ARKKLISSHP  453 (461)
T ss_pred             ceEEEeecCh
Confidence            5544333333

>KOG1399|consensus

Probab=99.78  E-value=1.6e-19  Score=151.40  Aligned_cols=152  Identities=26%  Similarity=0.397  Sum_probs=125.2

Q ss_pred             CcccccCCCCCCCCceecCCccccccccccccCC-CCeeEeecccccchhhHHHHHHHHHHHHHcCCCCCCCHHHHhHhH
Q psy14913          1 GYTYRYPFLHESCGINVVNKNVQPLYKHLINIEH-PSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADT   79 (166)
Q Consensus         1 GY~~~fPFL~~~~~l~~~~~~v~~Ly~~if~~~~-PsLaFiG~~~~~~~~~~~ElQA~~~a~~~~G~~~LPs~~em~~~~   79 (166)
                      ||.++||||+........++.+.+||+++|++.. |++.|+|+....++|+.+|+||+|++++++|..+||+.++|+.+.
T Consensus       266 gy~y~fPfl~~~~~~~~~~~~~~pl~k~~~p~~~~~~~~~~~l~~~~~~f~~~e~Q~r~~~~v~~G~~~lps~~~m~~d~  345 (448)
T KOG1399|consen  266 GYKYKFPFLETLGLGTVRDNIVGPLYKKVFPPALAPGLSLAGLPLIQIPFPMFELQARWVAAVLEGRLKLPSKDQMLEDG  345 (448)
T ss_pred             eeEeecceeccCCceeeccCcccchheeccchhhCccccccccCeeeEeecceehhhhhhHhhhcCCCcCCCHHHhhhhh
Confidence            8999999999876444566677799999999974 677888887766789999999999999999999999999999999


Q ss_pred             HHHHHHHhhcC--CCCcceeccc-chHHHHHHHHHHhcCCCCChHHHHHHHHhHHHHHhhhcCCCCCCceEecCCCcccc
Q psy14913         80 DQDIRAHRKES--QSTHTHVMHL-RSEKYLNSLASMMRGESPVPPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR  156 (166)
Q Consensus        80 ~~~~~~~~~~~--~~r~~h~~~~-~~~~Y~~~L~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~yrl~~~~~~~~  156 (166)
                      .+....+...+  ..+++|.+.. .+..|..+++... |+...++|         +....+.|+.+++.+++++++.|.+
T Consensus       346 ~~~~~~~~~~~~~~~~~t~~~~~~~l~~y~~~~~~~~-g~~~~~~~---------~~~~~~~g~~~~y~~~~~~~~~w~g  415 (448)
T KOG1399|consen  346 QEKYEKLDAVGLATGRHTHVPDYDELAEYINWFADLC-GFPKTEPW---------LAKEGWKGPCGLYAYGLTGPDKWDG  415 (448)
T ss_pred             hhhhhhhhhhcccccccccccchHHHHHHhhhhhhhc-CCCCcchH---------HhhhhccCccceeEeecccCccccc
Confidence            88776555555  4778876543 5788888888888 87653333         4456889999999999999999999


Q ss_pred             cccccc
Q psy14913        157 EPGAAK  162 (166)
Q Consensus       157 ~~~~~~  162 (166)
                      +..+|+
T Consensus       416 ~~~~~~  421 (448)
T KOG1399|consen  416 AAKLIL  421 (448)
T ss_pred             HHHHHH
Confidence            977765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	166
2xve_A	464	Crystal Structure Of Bacterial Flavin-Containing Mo		4e-09
2xvi_A	464	Crystal Structure Of The Mutant Bacterial Flavin Co		4e-09
2xlp_A	461	Joint-Functions Of Protein Residues And Nadp(H) In		5e-09
2xlr_A	461	Joint-Functions Of Protein Residues And Nadp(H) In		5e-09
2vq7_A	461	Bacterial Flavin-Containing Monooxygenase In Comple		5e-09
2xls_A	461	Joint-Functions Of Protein Residues And Nadp(H) In		5e-09
2xvf_A	464	Crystal Structure Of Bacterial Flavin-Containing Mo		7e-06
2gv8_A	447	Crystal Structure Of Flavin-Containing Monooxygenas		8e-04

>pdb|2XVE|A Chain A, Crystal Structure Of Bacterial Flavin-Containing Monooxygenase Length = 464

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 1   GYTYRYPFLHESCGINVVNKNVQPL--YKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRF 58
           GY + +PFL++   + V N  + PL  YK ++  ++P    IG+      F MFD Q  +
Sbjct: 273 GYIHHFPFLNDDLRL-VTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWY 331
Query: 59  FLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
              ++ G + LPSK EM AD+   +    KE        M+     Y+ +L  M    S 
Sbjct: 332 ARDVIMGRLPLPSKEEMKADS---MAWREKELTLVTAEEMYTYQGDYIQNLIDMTDYPSF 388
Query: 119 VPPVLLKIYFESFARRCEDFTAFRKDKYKII 149
             P   K + E    + E+   FR   Y+ +
Sbjct: 389 DIPATNKTFLEWKHHKKENIMTFRDHSYRSL 419

>pdb|2XVI|A Chain A, Crystal Structure Of The Mutant Bacterial Flavin Containing Monooxygenase (Y207s) Length = 464

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 1   GYTYRYPFLHESCGINVVNKNVQPL--YKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRF 58
           GY + +PFL++   + V N  + PL  YK ++  ++P    IG+      F MFD Q  +
Sbjct: 273 GYIHHFPFLNDDLRL-VTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWY 331
Query: 59  FLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
              ++ G + LPSK EM AD+   +    KE        M+     Y+ +L  M    S 
Sbjct: 332 ARDVIMGRLPLPSKEEMKADS---MAWREKELTLVTAEEMYTYQGDYIQNLIDMTDYPSF 388
Query: 119 VPPVLLKIYFESFARRCEDFTAFRKDKYKII 149
             P   K + E    + E+   FR   Y+ +
Sbjct: 389 DIPATNKTFLEWKHHKKENIMTFRDHSYRSL 419

>pdb|2XLP|A Chain A, Joint-Functions Of Protein Residues And Nadp(H) In Oxygen- Activation By Flavin-Containing Monooxygenase: Asn78ser Mutant Length = 461

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 1   GYTYRYPFLHESCGINVVNKNVQPL--YKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRF 58
           GY + +PFL++   + V N  + PL  YK ++  ++P    IG+      F MFD Q  +
Sbjct: 278 GYIHHFPFLNDDLRL-VTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWY 336
Query: 59  FLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
              ++ G + LPSK EM AD+   +    KE        M+     Y+ +L  M    S 
Sbjct: 337 ARDVIMGRLPLPSKEEMKADS---MAWREKELTLVTAEEMYTYQGDYIQNLIDMTDYPSF 393
Query: 119 VPPVLLKIYFESFARRCEDFTAFRKDKYKII 149
             P   K + E    + E+   FR   Y+ +
Sbjct: 394 DIPATNKTFLEWKHHKKENIMTFRDHSYRSL 424

>pdb|2XLR|A Chain A, Joint-Functions Of Protein Residues And Nadp(H) In Oxygen-Activation By Flavin-Containing Monooxygenase: Asn78asp Mutant Length = 461

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 1   GYTYRYPFLHESCGINVVNKNVQPL--YKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRF 58
           GY + +PFL++   + V N  + PL  YK ++  ++P    IG+      F MFD Q  +
Sbjct: 278 GYIHHFPFLNDDLRL-VTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWY 336
Query: 59  FLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
              ++ G + LPSK EM AD+   +    KE        M+     Y+ +L  M    S 
Sbjct: 337 ARDVIMGRLPLPSKEEMKADS---MAWREKELTLVTAEEMYTYQGDYIQNLIDMTDYPSF 393
Query: 119 VPPVLLKIYFESFARRCEDFTAFRKDKYKII 149
             P   K + E    + E+   FR   Y+ +
Sbjct: 394 DIPATNKTFLEWKHHKKENIMTFRDHSYRSL 424

>pdb|2VQ7|A Chain A, Bacterial Flavin-Containing Monooxygenase In Complex With Nadp: Native Data Length = 461

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 1   GYTYRYPFLHESCGINVVNKNVQPL--YKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRF 58
           GY + +PFL++   + V N  + PL  YK ++  ++P    IG+      F MFD Q  +
Sbjct: 278 GYIHHFPFLNDDLRL-VTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWY 336
Query: 59  FLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
              ++ G + LPSK EM AD+   +    KE        M+     Y+ +L  M    S 
Sbjct: 337 ARDVIMGRLPLPSKEEMKADS---MAWREKELTLVTAEEMYTYQGDYIQNLIDMTDYPSF 393
Query: 119 VPPVLLKIYFESFARRCEDFTAFRKDKYKII 149
             P   K + E    + E+   FR   Y+ +
Sbjct: 394 DIPATNKTFLEWKHHKKENIMTFRDHSYRSL 424

>pdb|2XLS|A Chain A, Joint-Functions Of Protein Residues And Nadp(H) In Oxygen-Activation By Flavin-Containing Monooxygenase: Asn78lys Mutant Length = 461

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 1   GYTYRYPFLHESCGINVVNKNVQPL--YKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRF 58
           GY + +PFL++   + V N  + PL  YK ++  ++P    IG+      F MFD Q  +
Sbjct: 278 GYIHHFPFLNDDLRL-VTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWY 336
Query: 59  FLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
              ++ G + LPSK EM AD+   +    KE        M+     Y+ +L  M    S 
Sbjct: 337 ARDVIMGRLPLPSKEEMKADS---MAWREKELTLVTAEEMYTYQGDYIQNLIDMTDYPSF 393
Query: 119 VPPVLLKIYFESFARRCEDFTAFRKDKYKII 149
             P   K + E    + E+   FR   Y+ +
Sbjct: 394 DIPATNKTFLEWKHHKKENIMTFRDHSYRSL 424

>pdb|2XVF|A Chain A, Crystal Structure Of Bacterial Flavin-Containing Monooxygenase Length = 464

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 1   GYTYRYPFLHESCGINVVNKNVQPL--YKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRF 58
           GY + +PFL++   + V N  + PL  YK ++  ++P    IG       F  FD Q  +
Sbjct: 273 GYIHHFPFLNDDLRL-VTNNRLWPLNLYKGVVWEDNPKFFYIGXQDQWYSFNXFDAQAWY 331
Query: 59  FLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESP 118
              ++ G + LPSK E  AD+        KE         +     Y+ +L       S 
Sbjct: 332 ARDVIXGRLPLPSKEEXKADS---XAWREKELTLVTAEEXYTYQGDYIQNLIDXTDYPSF 388
Query: 119 VPPVLLKIYFESFARRCEDFTAFRKDKYKII 149
             P   K + E    + E+   FR   Y+ +
Sbjct: 389 DIPATNKTFLEWKHHKKENIXTFRDHSYRSL 419

>pdb|2GV8|A Chain A, Crystal Structure Of Flavin-Containing Monooxygenase (Fmo) From S.Pombe And Nadph Cofactor Complex Length = 447

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 1   GYTYRYPFLH----ESCGINVVNKN--VQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDL 54
           GY Y  PF      +S    +++    V  +Y+H+  I  P++  +G+    V F     
Sbjct: 289 GYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQA 348
Query: 55  QVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMR 114
           Q  F  ++  G + LPSK E L   D+   +    +   H+ + + +   Y+N L    +
Sbjct: 349 QAAFLARVWSGRLKLPSKEEQLKWQDELXFSLSGANNXYHS-LDYPKDATYINKLHDWCK 407
Query: 115 GESPV 119
             +PV
Sbjct: 408 QATPV 412

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
2xve_A	464	Flavin-containing monooxygenase; oxidoreductase; H	9e-32
2gv8_A	447	Monooxygenase; FMO, FAD, NADPH, cofactor complex,	3e-26
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Length = 464

 Score =  117 bits (294), Expect = 9e-32
 Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 4/158 (2%)

Query: 1   GYTYRYPFLHESCGINVVNKN-VQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFF 59
           GY + +PFL++   +   N+     LYK ++  ++P    IG+      F MFD Q  + 
Sbjct: 273 GYIHHFPFLNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWYA 332

Query: 60  LQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPV 119
             ++ G + LPSK EM AD+        KE        M+     Y+ +L  M    S  
Sbjct: 333 RDVIMGRLPLPSKEEMKADSMAWR---EKELTLVTAEEMYTYQGDYIQNLIDMTDYPSFD 389

Query: 120 PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVRE 157
            P   K + E    + E+   FR   Y+ +       +
Sbjct: 390 IPATNKTFLEWKHHKKENIMTFRDHSYRSLMTGTMAPK 427

>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Length = 447

 Score =  101 bits (254), Expect = 3e-26
 Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 9/160 (5%)

Query: 1   GYTYRYPFLHES------CGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDL 54
           GY Y  PF   +        +     +V  +Y+H+  I  P++  +G+    V F     
Sbjct: 289 GYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQA 348

Query: 55  QVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMR 114
           Q  F  ++  G + LPSK E L   D+ + +    +   H+ + + +   Y+N L    +
Sbjct: 349 QAAFLARVWSGRLKLPSKEEQLKWQDELMFSLSGANNMYHS-LDYPKDATYINKLHDWCK 407

Query: 115 GESPVPPVLL--KIYFESFARRCEDFTAFRKDKYKIINEK 152
             +PV         + E      E+  + R   + I   K
Sbjct: 408 QATPVLEEEFPSPYWGEKERSIRENMWSIRAKFFGIEPPK 447

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 40/175 (22%)

Query: 11  ESCGINVVN-KNVQPLYKHL------INIEHPSMCII--GIPGDTVVFYMFDLQVRFFL- 60
           ES  +NV+     + ++  L       +I    + +I   +    V+  +  L     + 
Sbjct: 360 ESS-LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418

Query: 61  -QLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPV 119
            Q  +  +++P           +++   +   + H  ++    + Y  ++      +  +
Sbjct: 419 KQPKESTISIP-------SIYLELKVKLENEYALHRSIV----DHY--NIPKTFDSDDLI 465

Query: 120 PPVLLKIYFESF-------ARRCEDFTAFRK---D----KYKIINEKVFVREPGA 160
           PP L + YF S            E  T FR    D    + KI ++       G+
Sbjct: 466 PPYLDQ-YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS 519

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
2xve_A	464	Flavin-containing monooxygenase; oxidoreductase; H	99.9
2gv8_A	447	Monooxygenase; FMO, FAD, NADPH, cofactor complex,	99.74
3d1c_A	369	Flavin-containing putative monooxygenase; NP_37310	96.41
3gwf_A	540	Cyclohexanone monooxygenase; flavoprotein biocatal	92.81
3uox_A	545	Otemo; baeyer-villiger monooxygenase, oxidoreducta	91.74
4ap3_A	549	Steroid monooxygenase; oxidoreductase, baeyer-vill	87.8
1w4x_A	542	Phenylacetone monooxygenase; baeyer-villiger, FAD;	87.22

>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*

Probab=99.90  E-value=8.2e-24  Score=177.36  Aligned_cols=156  Identities=23%  Similarity=0.346  Sum_probs=133.3

Q ss_pred             CcccccCCCCCCCCceecCC-ccccccccccccCCCCeeEeecccccchhhHHHHHHHHHHHHHcCCCCCCCHHHHhHhH
Q psy14913          1 GYTYRYPFLHESCGINVVNK-NVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADT   79 (166)
Q Consensus         1 GY~~~fPFL~~~~~l~~~~~-~v~~Ly~~if~~~~PsLaFiG~~~~~~~~~~~ElQA~~~a~~~~G~~~LPs~~em~~~~   79 (166)
                      ||+.++|||+++..+..+++ .+.++|++++++++|+|+|||.+.....++++|.||+|+|++++|+.+|||.++|++++
T Consensus       273 G~~p~~~~l~~~~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~~~lP~~~~m~~~~  352 (464)
T 2xve_A          273 GYIHHFPFLNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMGRLPLPSKEEMKADS  352 (464)
T ss_dssp             CBCCCCTTBCTTTCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTTSSCCCCHHHHHHHH
T ss_pred             CCCCCCCCcCcccccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHHHHHHHHHHHcCCCCCcCHHHHHHHH
Confidence            89999999987555555554 56689999999999999999998876789999999999999999999999999999999


Q ss_pred             HHHHHHHhhcC--CCCcceecccchHHHHHHHHHHhcCCCCC-hHHHHHHHHhHHHHHhhhcCCCCCCceEecCCCcccc
Q psy14913         80 DQDIRAHRKES--QSTHTHVMHLRSEKYLNSLASMMRGESPV-PPVLLKIYFESFARRCEDFTAFRKDKYKIINEKVFVR  156 (166)
Q Consensus        80 ~~~~~~~~~~~--~~r~~h~~~~~~~~Y~~~L~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~yrl~~~~~~~~  156 (166)
                      +++.+. ....  ..+++|.    +.+|+|+|++++ |+.++ ++++++++..+...+..++..||+.+||++.++++..
T Consensus       353 ~~~~~~-~~~~~~~~~~~~~----~~~Y~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  426 (464)
T 2xve_A          353 MAWREK-ELTLVTAEEMYTY----QGDYIQNLIDMT-DYPSFDIPATNKTFLEWKHHKKENIMTFRDHSYRSLMTGTMAP  426 (464)
T ss_dssp             HHHHHH-HHTCCSHHHHHHH----HHHHHHHHHTTS-SSCCCCHHHHHHHHHHHHHHHHHCTTTGGGCCCBCTTTCCBCC
T ss_pred             HHHHHH-hhccCCCCCcccc----HHHHHHHHHHHc-CCCCCChHHHHHHHHHHHHHHHhchhhhcccceeEecCceeec
Confidence            887663 2221  2455554    578999999999 99987 6789999999999999999999999999999999988


Q ss_pred             cccccc
Q psy14913        157 EPGAAK  162 (166)
Q Consensus       157 ~~~~~~  162 (166)
                      .+..-|
T Consensus       427 ~~~~~~  432 (464)
T 2xve_A          427 KHHTPW  432 (464)
T ss_dssp             CCSSCG
T ss_pred             cCCCHH
Confidence            876655

>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*

Probab=99.74  E-value=1e-17  Score=139.25  Aligned_cols=114  Identities=25%  Similarity=0.436  Sum_probs=94.2

Q ss_pred             CcccccCC-----CCCC-CCceecCCccccccccccccCCCCeeEeecccccchhhHHHHHHHHHHHHHcCCCCCCCHHH
Q psy14913          1 GYTYRYPF-----LHES-CGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAE   74 (166)
Q Consensus         1 GY~~~fPF-----L~~~-~~l~~~~~~v~~Ly~~if~~~~PsLaFiG~~~~~~~~~~~ElQA~~~a~~~~G~~~LPs~~e   74 (166)
                      ||+.++||     |+.. ..+..++..+.+||+++|++.+|+|+|+|.+.....++++|.||+|+|++++|+.+|||.++
T Consensus       289 G~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~~lp~~~~  368 (447)
T 2gv8_A          289 GYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRLKLPSKEE  368 (447)
T ss_dssp             CBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSSCCCCHHH
T ss_pred             CCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccccccCchHHHHHHHHHHHHHcCCCCCcCHHH
Confidence            89999999     8752 23445665656899999999999999999998877899999999999999999999999999


Q ss_pred             HhHhHHHHHHHHhhcCCCCcceecc-cchHHHHHHHHHHhcCCC
Q psy14913         75 MLADTDQDIRAHRKESQSTHTHVMH-LRSEKYLNSLASMMRGES  117 (166)
Q Consensus        75 m~~~~~~~~~~~~~~~~~r~~h~~~-~~~~~Y~~~L~~~~~g~~  117 (166)
                      |+++++++.+.+  .+..+.+|.+. +++.+|+++|++.+ |..
T Consensus       369 m~~~~~~~~~~~--~~~~~~~~~~~~~~~~~y~~~l~~~~-~~~  409 (447)
T 2gv8_A          369 QLKWQDELMFSL--SGANNMYHSLDYPKDATYINKLHDWC-KQA  409 (447)
T ss_dssp             HHHHHHHHHHHH--TTCGGGTTBCTTTHHHHHHHHHHHHH-HTC
T ss_pred             HHHHHHHHHHHh--cCCCcceeecCCccHHHHHHHHHHHh-Ccc
Confidence            999888765432  23344557665 67899999999998 663

>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}

Probab=96.41  E-value=0.00057  Score=54.14  Aligned_cols=56  Identities=21%  Similarity=0.379  Sum_probs=41.7

Q ss_pred             ccccccccCCCCeeEeeccccc--c---hhhHHHHHHHHHHHHHcCCCCCCCHHHHhHhHH
Q psy14913         25 LYKHLINIEHPSMCIIGIPGDT--V---VFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTD   80 (166)
Q Consensus        25 Ly~~if~~~~PsLaFiG~~~~~--~---~~~~~ElQA~~~a~~~~G~~~LPs~~em~~~~~   80 (166)
                      +..+.....+|+++.+|-+...  .   ....++.||+++|+.+.|+..+|+.++|++++.
T Consensus       291 v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~~~~  351 (369)
T 3d1c_A          291 LTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQ  351 (369)
T ss_dssp             BCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             echhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHHHHH
Confidence            3444456678999999987543  1   123578999999999999999999876766444

>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*

Probab=92.81  E-value=0.11  Score=43.94  Aligned_cols=41  Identities=15%  Similarity=0.210  Sum_probs=34.2

Q ss_pred             cccccccccCCCCeeEe-eccccc-chhhHHHHHHHHHHHHHc
Q psy14913         24 PLYKHLINIEHPSMCII-GIPGDT-VVFYMFDLQVRFFLQLMK   64 (166)
Q Consensus        24 ~Ly~~if~~~~PsLaFi-G~~~~~-~~~~~~ElQA~~~a~~~~   64 (166)
                      ..|+.+.-+..||++++ |-..+. +...++|.|++|++++++
T Consensus       411 ~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~  453 (540)
T 3gwf_A          411 TSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIG  453 (540)
T ss_dssp             CCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHH
T ss_pred             hhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHH
Confidence            58999999999999999 644333 467999999999999885

>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*

Probab=91.74  E-value=0.29  Score=41.39  Aligned_cols=41  Identities=20%  Similarity=0.194  Sum_probs=34.1

Q ss_pred             cccccccccCCCCeeEeeccccc----chhhHHHHHHHHHHHHHc
Q psy14913         24 PLYKHLINIEHPSMCIIGIPGDT----VVFYMFDLQVRFFLQLMK   64 (166)
Q Consensus        24 ~Ly~~if~~~~PsLaFiG~~~~~----~~~~~~ElQA~~~a~~~~   64 (166)
                      .-|+.+.-+..||++++.=+.+.    +...++|.|++|+++++.
T Consensus       418 ~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~  462 (545)
T 3uox_A          418 STYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMIS  462 (545)
T ss_dssp             CCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             ceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence            57999999999999998655532    356899999999999985

>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*

Probab=87.80  E-value=0.36  Score=40.81  Aligned_cols=41  Identities=17%  Similarity=0.193  Sum_probs=33.7

Q ss_pred             cccccccccCCCCeeEeeccc-cc---chhhHHHHHHHHHHHHHc
Q psy14913         24 PLYKHLINIEHPSMCIIGIPG-DT---VVFYMFDLQVRFFLQLMK   64 (166)
Q Consensus        24 ~Ly~~if~~~~PsLaFiG~~~-~~---~~~~~~ElQA~~~a~~~~   64 (166)
                      ..|+.+.-+..||++++.=+. +.   +...++|.|++|+++++.
T Consensus       423 ~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~  467 (549)
T 4ap3_A          423 RTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIA  467 (549)
T ss_dssp             CCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             hhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHH
Confidence            589999999999999984443 32   357999999999999885

>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*

Probab=87.22  E-value=0.85  Score=38.22  Aligned_cols=41  Identities=15%  Similarity=0.259  Sum_probs=33.4

Q ss_pred             cccccccccCCCCeeEe-eccccc---chhhHHHHHHHHHHHHHc
Q psy14913         24 PLYKHLINIEHPSMCII-GIPGDT---VVFYMFDLQVRFFLQLMK   64 (166)
Q Consensus        24 ~Ly~~if~~~~PsLaFi-G~~~~~---~~~~~~ElQA~~~a~~~~   64 (166)
                      ..|+.+-.+..||++++ |-..+.   ...+.+|.|++|+++++.
T Consensus       418 ~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~  462 (542)
T 1w4x_A          418 RTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIA  462 (542)
T ss_dssp             CCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             heecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence            47888888999999998 866432   245899999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	166
d2gv8a1	335	c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monox	5e-14

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Length = 335

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

 Score = 65.8 bits (159), Expect = 5e-14
 Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 3/144 (2%)

Query: 7   PFLHESCGINVVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGY 66
                   +     +V  +Y+H+  I  P++  +G+    V F     Q  F  ++  G 
Sbjct: 192 KLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGR 251

Query: 67  VTLPSKAEMLADTDQDIRAHRKESQSTHTHVMHLRSEKYLNSLASMMRGESPVPPVLL-- 124
           + LPSK E L   D+ + +    +   H  + + +   Y+N L    +  +PV       
Sbjct: 252 LKLPSKEEQLKWQDELMFSLSGANNMYH-SLDYPKDATYINKLHDWCKQATPVLEEEFPS 310

Query: 125 KIYFESFARRCEDFTAFRKDKYKI 148
             + E      E+  + R   + I
Sbjct: 311 PYWGEKERSIRENMWSIRAKFFGI 334

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	166
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	99.66
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.46

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=99.66  E-value=1.9e-16  Score=125.01  Aligned_cols=95  Identities=23%  Similarity=0.375  Sum_probs=79.7

Q ss_pred             ecCCccccccccccccCCCCeeEeecccccchhhHHHHHHHHHHHHHcCCCCCCCHHHHhHhHHHHHHHHhhcCCCCcce
Q psy14913         17 VVNKNVQPLYKHLINIEHPSMCIIGIPGDTVVFYMFDLQVRFFLQLMKGYVTLPSKAEMLADTDQDIRAHRKESQSTHTH   96 (166)
Q Consensus        17 ~~~~~v~~Ly~~if~~~~PsLaFiG~~~~~~~~~~~ElQA~~~a~~~~G~~~LPs~~em~~~~~~~~~~~~~~~~~r~~h   96 (166)
                      .+++++.+||+|+|++.+|+|+|+|.+..+.+++++|+||+|+|++++|+++||++++|.++..++....  .+..+.+|
T Consensus       202 ~~~~~~~~ly~~~~~~~~p~l~f~G~~~~v~~~~~~e~Qa~~~a~~~~g~~~Lps~~~m~~~~~~~~~~~--~~~~~~~~  279 (335)
T d2gv8a1         202 DDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRLKLPSKEEQLKWQDELMFSL--SGANNMYH  279 (335)
T ss_dssp             SSSSSCCSEETTTEETTCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHH--TTCGGGTT
T ss_pred             ccccceeeeecccccCCCCceEEeeeEEEEecCCchHHHHHHHHHHHcCCccCCCcchhhhhhHHHHHhh--cccCccce
Confidence            3567788999999999999999999999988999999999999999999999999999999877665432  23344455


Q ss_pred             ec-ccchHHHHHHHHHHh
Q psy14913         97 VM-HLRSEKYLNSLASMM  113 (166)
Q Consensus        97 ~~-~~~~~~Y~~~L~~~~  113 (166)
                      .+ .+.+.+|+++|++.+
T Consensus       280 ~~~~~~~~~y~~~L~~~~  297 (335)
T d2gv8a1         280 SLDYPKDATYINKLHDWC  297 (335)
T ss_dssp             BCTTTHHHHHHHHHHHHH
T ss_pred             ecCCchHHHHHHHHHHHH
Confidence            45 456889999999876

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.46  E-value=0.19  Score=37.20  Aligned_cols=41  Identities=17%  Similarity=0.327  Sum_probs=32.6

Q ss_pred             cccccccccCCCCeeEeeccccc---c-hhhHHHHHHHHHHHHHc
Q psy14913         24 PLYKHLINIEHPSMCIIGIPGDT---V-VFYMFDLQVRFFLQLMK   64 (166)
Q Consensus        24 ~Ly~~if~~~~PsLaFiG~~~~~---~-~~~~~ElQA~~~a~~~~   64 (166)
                      .-|..+.-+..||+++++=+.+.   + ...++|.|++|++.+++
T Consensus       174 ~ty~G~~v~gfPN~f~~~Gp~s~~~~~~~~~~~e~q~~~i~~~i~  218 (298)
T d1w4xa1         174 RTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIA  218 (298)
T ss_dssp             CCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCeEEEecCCCCccccccHHHHHHHHHHHHHHHHH
Confidence            46888888899999998655543   2 45779999999999874