Psyllid ID: psy14931


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
MTSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ
cccccEEEEEEEccEEEccccccccEEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccEEEEEEccccccccccEEEEEc
cccEEEEEEEEEcccHHcccccccEEEEEHHHccccHHHHHHHHHHHHHHHHHHHcccEEEEEccccHHHcccccccEEEEEEEEEEEEccEcccccHccEEEEEc
MTSVTDMVSYYtlpstvmnheVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKnegfdvfnaldlmenkeflgplkfgigdgnlQYYLynwkcpsippnkiglvlq
MTSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKcpsippnkiglvlq
MTSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ
******MVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGL***
MTSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ
MTSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ
*TSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query106 2.2.26 [Sep-21-2011]
O70310496 Glycylpeptide N-tetradeca yes N/A 0.981 0.209 0.740 3e-40
Q8K1Q0496 Glycylpeptide N-tetradeca yes N/A 0.981 0.209 0.740 4e-40
O61613472 Glycylpeptide N-tetradeca yes N/A 0.971 0.218 0.679 4e-40
Q5RAF3496 Glycylpeptide N-tetradeca yes N/A 0.981 0.209 0.740 4e-40
P30419496 Glycylpeptide N-tetradeca yes N/A 0.981 0.209 0.740 4e-40
A7YT82492 Glycylpeptide N-tetradeca no N/A 0.971 0.209 0.737 4e-40
Q9N181498 Glycylpeptide N-tetradeca yes N/A 0.971 0.206 0.718 1e-39
O70311529 Glycylpeptide N-tetradeca no N/A 0.971 0.194 0.718 1e-39
O60551498 Glycylpeptide N-tetradeca no N/A 0.971 0.206 0.718 4e-39
P31717497 Glycylpeptide N-tetradeca no N/A 0.981 0.209 0.733 9e-39
>sp|O70310|NMT1_MOUSE Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus GN=Nmt1 PE=1 SV=1 Back     alignment and function desciption
 Score =  163 bits (412), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 77/104 (74%), Positives = 87/104 (83%)

Query: 3   SVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNA 62
            VTD +S+YTLPST+MNH  HKS+KAAYSFYNV  +T  +DLM DAL+ AK +GFDVFNA
Sbjct: 393 EVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNA 452

Query: 63  LDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 106
           LDLMENK FL  LKFGIGDGNLQYYLYNWKCPS+   K+GLVLQ
Sbjct: 453 LDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496




Adds a myristoyl group to the N-terminal glycine residue of certain cellular and viral proteins.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 9EC: 7
>sp|Q8K1Q0|NMT1_RAT Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus GN=Nmt1 PE=2 SV=1 Back     alignment and function description
>sp|O61613|NMT_DROME Glycylpeptide N-tetradecanoyltransferase OS=Drosophila melanogaster GN=Nmt PE=2 SV=2 Back     alignment and function description
>sp|Q5RAF3|NMT1_PONAB Glycylpeptide N-tetradecanoyltransferase 1 OS=Pongo abelii GN=NMT1 PE=2 SV=1 Back     alignment and function description
>sp|P30419|NMT1_HUMAN Glycylpeptide N-tetradecanoyltransferase 1 OS=Homo sapiens GN=NMT1 PE=1 SV=2 Back     alignment and function description
>sp|A7YT82|NMT2_DANRE Glycylpeptide N-tetradecanoyltransferase 2 OS=Danio rerio GN=nmt2 PE=2 SV=2 Back     alignment and function description
>sp|Q9N181|NMT2_BOVIN Glycylpeptide N-tetradecanoyltransferase 2 OS=Bos taurus GN=NMT2 PE=2 SV=1 Back     alignment and function description
>sp|O70311|NMT2_MOUSE Glycylpeptide N-tetradecanoyltransferase 2 OS=Mus musculus GN=Nmt2 PE=1 SV=1 Back     alignment and function description
>sp|O60551|NMT2_HUMAN Glycylpeptide N-tetradecanoyltransferase 2 OS=Homo sapiens GN=NMT2 PE=1 SV=1 Back     alignment and function description
>sp|P31717|NMT1_BOVIN Glycylpeptide N-tetradecanoyltransferase 1 OS=Bos taurus GN=NMT1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query106
357628252 470 putative N-myristoyltransferase [Danaus 0.981 0.221 0.855 2e-45
345491794 402 PREDICTED: glycylpeptide N-tetradecanoyl 0.981 0.258 0.788 2e-44
328785078 480 PREDICTED: glycylpeptide N-tetradecanoyl 0.971 0.214 0.766 2e-43
157108693 508 n-myristoyl transferase [Aedes aegypti] 0.962 0.200 0.774 3e-43
117935431 479 N-myristoyltransferase, putative [Glypta 0.971 0.215 0.786 4e-43
190702234 479 n-myristoyltransferase, putative [Glypta 0.971 0.215 0.786 4e-43
347966636 555 AGAP001804-PA [Anopheles gambiae str. PE 0.971 0.185 0.776 4e-43
322794120 470 hypothetical protein SINV_05754 [Solenop 0.971 0.219 0.766 4e-43
332022547 470 Glycylpeptide N-tetradecanoyltransferase 0.971 0.219 0.766 5e-43
307180581 463 Glycylpeptide N-tetradecanoyltransferase 0.971 0.222 0.766 1e-42
>gi|357628252|gb|EHJ77642.1| putative N-myristoyltransferase [Danaus plexippus] Back     alignment and taxonomy information
 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/104 (85%), Positives = 94/104 (90%)

Query: 3   SVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNA 62
           S+TD VSYYTLPSTV+ H VHK+IKAAYSFYNVS KT WV+LM DALITAKN GFDVFNA
Sbjct: 367 SITDFVSYYTLPSTVVYHPVHKTIKAAYSFYNVSTKTPWVELMLDALITAKNSGFDVFNA 426

Query: 63  LDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 106
           LDLMENKEFL PLKFGIGDGNLQYYLYNW+CPSI  NKIGLVLQ
Sbjct: 427 LDLMENKEFLEPLKFGIGDGNLQYYLYNWRCPSITSNKIGLVLQ 470




Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345491794|ref|XP_001600387.2| PREDICTED: glycylpeptide N-tetradecanoyltransferase 2-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|328785078|ref|XP_624861.2| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1 [Apis mellifera] gi|380022298|ref|XP_003694987.1| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Apis florea] Back     alignment and taxonomy information
>gi|157108693|ref|XP_001650345.1| n-myristoyl transferase [Aedes aegypti] gi|108879244|gb|EAT43469.1| AAEL005092-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|117935431|gb|ABK57056.1| N-myristoyltransferase, putative [Glyptapanteles indiensis] Back     alignment and taxonomy information
>gi|190702234|gb|ACE75132.1| n-myristoyltransferase, putative [Glyptapanteles flavicoxis] Back     alignment and taxonomy information
>gi|347966636|ref|XP_321256.5| AGAP001804-PA [Anopheles gambiae str. PEST] gi|333469968|gb|EAA01164.5| AGAP001804-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|322794120|gb|EFZ17329.1| hypothetical protein SINV_05754 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332022547|gb|EGI62850.1| Glycylpeptide N-tetradecanoyltransferase 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307180581|gb|EFN68536.1| Glycylpeptide N-tetradecanoyltransferase 2 [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query106
ZFIN|ZDB-GENE-050522-477505 nmt1a "N-myristoyltransferase 0.971 0.203 0.766 2.3e-39
UNIPROTKB|F1MZK0496 NMT1 "Glycylpeptide N-tetradec 0.971 0.207 0.747 7.8e-39
UNIPROTKB|E2RPZ9496 NMT1 "Glycylpeptide N-tetradec 0.971 0.207 0.747 7.8e-39
UNIPROTKB|P30419496 NMT1 "Glycylpeptide N-tetradec 0.971 0.207 0.747 7.8e-39
UNIPROTKB|F1RR06496 NMT1 "Glycylpeptide N-tetradec 0.971 0.207 0.747 7.8e-39
MGI|MGI:102579496 Nmt1 "N-myristoyltransferase 1 0.971 0.207 0.747 7.8e-39
RGD|628642496 Nmt1 "N-myristoyltransferase 1 0.971 0.207 0.747 7.8e-39
ZFIN|ZDB-GENE-030131-717493 nmt2 "N-myristoyltransferase 2 0.971 0.208 0.737 7.8e-39
FB|FBgn0020392472 Nmt "N-myristoyl transferase" 0.971 0.218 0.679 7e-38
UNIPROTKB|P31717497 NMT1 "Glycylpeptide N-tetradec 0.971 0.207 0.740 7e-38
ZFIN|ZDB-GENE-050522-477 nmt1a "N-myristoyltransferase 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 79/103 (76%), Positives = 89/103 (86%)

Query:     4 VTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNAL 63
             VTD++S+YTLPST+MNH VH+S+KAAYSFYNV   T  VDLM DALI AK++GFDVFNAL
Sbjct:   403 VTDILSFYTLPSTIMNHPVHRSLKAAYSFYNVHTTTPLVDLMGDALILAKSKGFDVFNAL 462

Query:    64 DLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 106
             DLMENK FL  LKFGIGDGNLQYYLYNWKCPS+   K+GLVLQ
Sbjct:   463 DLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGSEKVGLVLQ 505




GO:0004379 "glycylpeptide N-tetradecanoyltransferase activity" evidence=IEA
GO:0006499 "N-terminal protein myristoylation" evidence=IEA
GO:0016740 "transferase activity" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA
UNIPROTKB|F1MZK0 NMT1 "Glycylpeptide N-tetradecanoyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RPZ9 NMT1 "Glycylpeptide N-tetradecanoyltransferase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P30419 NMT1 "Glycylpeptide N-tetradecanoyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RR06 NMT1 "Glycylpeptide N-tetradecanoyltransferase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:102579 Nmt1 "N-myristoyltransferase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|628642 Nmt1 "N-myristoyltransferase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-717 nmt2 "N-myristoyltransferase 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0020392 Nmt "N-myristoyl transferase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P31717 NMT1 "Glycylpeptide N-tetradecanoyltransferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8ILW6NMT_PLAF72, ., 3, ., 1, ., 9, 70.50480.97160.2512yesN/A
Q9LTR9NMT1_ARATH2, ., 3, ., 1, ., 9, 70.56310.96220.2350yesN/A
Q553B6NMT_DICDI2, ., 3, ., 1, ., 9, 70.52940.96220.2469yesN/A
Q8K1Q0NMT1_RAT2, ., 3, ., 1, ., 9, 70.74030.98110.2096yesN/A
Q9N181NMT2_BOVIN2, ., 3, ., 1, ., 9, 70.71840.97160.2068yesN/A
O70310NMT1_MOUSE2, ., 3, ., 1, ., 9, 70.74030.98110.2096yesN/A
P46548NMT_CAEEL2, ., 3, ., 1, ., 9, 70.60190.97160.2288yesN/A
O61613NMT_DROME2, ., 3, ., 1, ., 9, 70.67960.97160.2182yesN/A
Q5RAF3NMT1_PONAB2, ., 3, ., 1, ., 9, 70.74030.98110.2096yesN/A
P30419NMT1_HUMAN2, ., 3, ., 1, ., 9, 70.74030.98110.2096yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!
3rd Layer2.3.1.97LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query106
pfam02799190 pfam02799, NMT_C, Myristoyl-CoA:protein N-myristoy 4e-62
COG5092451 COG5092, NMT1, N-myristoyl transferase [Lipid meta 6e-28
>gnl|CDD|202401 pfam02799, NMT_C, Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain Back     alignment and domain information
 Score =  186 bits (475), Expect = 4e-62
 Identities = 63/104 (60%), Positives = 77/104 (74%), Gaps = 2/104 (1%)

Query: 4   VTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNAL 63
           +TD  S+Y+LPSTV+ +  HK++KAAYSFY  +  T+   LM DALI AKN GFDVFNAL
Sbjct: 87  ITDFFSFYSLPSTVIGNPKHKTLKAAYSFYYAATSTRLKQLMNDALILAKNLGFDVFNAL 146

Query: 64  DLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSI--PPNKIGLVL 105
           DLM+NK FL  LKFG GDG L YYLYN++CP I    + +GLVL
Sbjct: 147 DLMDNKLFLEDLKFGPGDGQLNYYLYNYRCPPIMGGISGVGLVL 190


The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. Length = 190

>gnl|CDD|227423 COG5092, NMT1, N-myristoyl transferase [Lipid metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 106
PF02799190 NMT_C: Myristoyl-CoA:protein N-myristoyltransferas 100.0
KOG2779|consensus421 100.0
COG5092451 NMT1 N-myristoyl transferase [Lipid metabolism] 100.0
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2 Back     alignment and domain information
Probab=100.00  E-value=7.5e-56  Score=337.25  Aligned_cols=104  Identities=64%  Similarity=1.099  Sum_probs=93.7

Q ss_pred             CccceEEEEeecCeeeeecCccceeeeeeeEEEeecCCCHHHHHHHHHHHHHhcCCcEEEeeccccCccccccCCCcccc
Q psy14931          2 TSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGD   81 (106)
Q Consensus         2 ~~itDf~SFY~lpstvl~~~~~~~l~aAY~~Y~~~~~~~l~~L~~daLi~Ak~~gfDVfNaLdim~N~~fL~~lKF~~Gd   81 (106)
                      |+||||+|||+||||||+|++|++|+|||+|||++|++|++|||+||||+||+.|||||||||+|||++||++|||++||
T Consensus        85 ~~ITDf~SFY~Lpstvi~~~k~~~l~aAY~fY~~~~~~~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~~fL~~lKFg~Gd  164 (190)
T PF02799_consen   85 GKITDFFSFYSLPSTVIGNPKHKTLKAAYSFYYVATSTRLKELMNDALILAKNEGFDVFNALDLMDNSSFLEDLKFGPGD  164 (190)
T ss_dssp             SEEEEEEEEEEEEEEESSSSSSSEEEEEEEEEEEESSSHHHHHHHHHHHHHHHTTESEEEEESTTTGGGTTTTTT-EEEE
T ss_pred             CceeeEEEEeecceeecCCCCccceeeeeeeeeeecCCCHHHHHHHHHHHHHHcCCCEEehhhhccchhhHhhCCccCCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEEEeecCCCCCCC--CceeEEc
Q psy14931         82 GNLQYYLYNWKCPSIPP--NKIGLVL  105 (106)
Q Consensus        82 G~L~YYLyNw~~~~i~~--~~vglvl  105 (106)
                      |+|||||||||||+|.+  ++||+||
T Consensus       165 G~L~YYLyNwr~~~i~~~~~~vGlVl  190 (190)
T PF02799_consen  165 GNLNYYLYNWRCPPIMGPISKVGLVL  190 (190)
T ss_dssp             EEEEEEEESEB-----GSBGGBE---
T ss_pred             CCeEEEEEeccCCCCCCCccccceeC
Confidence            99999999999999875  9999997



3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....

>KOG2779|consensus Back     alignment and domain information
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query106
3iu1_A383 Crystal Structure Of Human Type-I N-Myristoyltransf 4e-41
1rxt_A496 Crystal Structure Of Human Myristoyl-Coa:protein N- 6e-41
4b10_A385 Plasmodium Vivax N-Myristoyltransferase With A Non- 1e-28
4a95_A384 Plasmodium Vivax N-Myristoyltransferase With Quinol 1e-28
2wsa_A438 Crystal Structure Of Leishmania Major N- Myristoylt 3e-20
3h5z_A438 Crystal Structure Of Leishmania Major N-Myristoyltr 3e-20
2wuu_A421 Structure Of N-Myristoyltransferase From L. Donovan 3e-20
1nmt_A392 N-Myristoyl Transferase From Candida Albicans At 2. 1e-15
2nmt_A422 Myristoyl-Coa:protein N-Myristoyltransferase Bound 3e-14
2p6e_A455 Crystal Structures Of Saccharomyces Cerevisiae N-My 3e-14
>pdb|3IU1|A Chain A, Crystal Structure Of Human Type-I N-Myristoyltransferase With Bound Myristoyl-Coa Length = 383 Back     alignment and structure

Iteration: 1

Score = 162 bits (411), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 77/104 (74%), Positives = 87/104 (83%) Query: 3 SVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNA 62 VTD +S+YTLPST+MNH HKS+KAAYSFYNV +T +DLM DAL+ AK +GFDVFNA Sbjct: 280 EVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNA 339 Query: 63 LDLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 106 LDLMENK FL LKFGIGDGNLQYYLYNWKCPS+ K+GLVLQ Sbjct: 340 LDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 383
>pdb|1RXT|A Chain A, Crystal Structure Of Human Myristoyl-Coa:protein N- Myristoyltransferase. Length = 496 Back     alignment and structure
>pdb|4B10|A Chain A, Plasmodium Vivax N-Myristoyltransferase With A Non- Hydrolysable Co-Factor Length = 385 Back     alignment and structure
>pdb|4A95|A Chain A, Plasmodium Vivax N-Myristoyltransferase With Quinoline Inhibitor Length = 384 Back     alignment and structure
>pdb|2WSA|A Chain A, Crystal Structure Of Leishmania Major N- Myristoyltransferase (Nmt) With Bound Myristoyl-Coa And A Pyrazole Sulphonamide Ligand (Ddd85646) Length = 438 Back     alignment and structure
>pdb|3H5Z|A Chain A, Crystal Structure Of Leishmania Major N-Myristoyltransferase With Bound Myristoyl-Coa Length = 438 Back     alignment and structure
>pdb|2WUU|A Chain A, Structure Of N-Myristoyltransferase From L. Donovani Length = 421 Back     alignment and structure
>pdb|1NMT|A Chain A, N-Myristoyl Transferase From Candida Albicans At 2.45 A Length = 392 Back     alignment and structure
>pdb|2NMT|A Chain A, Myristoyl-Coa:protein N-Myristoyltransferase Bound To Myristoyl-Coa And Peptide Analogs Length = 422 Back     alignment and structure
>pdb|2P6E|A Chain A, Crystal Structures Of Saccharomyces Cerevisiae N-Myristoyltransferase With Bound Myristoyl-Coa Length = 455 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query106
3iu1_A383 Glycylpeptide N-tetradecanoyltransferase 1; N-myri 6e-51
1rxt_A496 Myristoyl-, glycylpeptide N-tetradecanoyltransfera 1e-50
4a95_A384 Glycylpeptide N-tetradecanoyltransferase; malaria; 3e-48
2wuu_A421 N-myristoyltransferase; acyltransferase; HET: NHM; 4e-46
1iyk_A392 Myristoyl-COA:protein N-myristoyltransferase; HET: 7e-39
1iic_A422 Peptide N-myristoyltransferase; HET: MYA; 2.20A {S 8e-38
>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* Length = 383 Back     alignment and structure
 Score =  163 bits (414), Expect = 6e-51
 Identities = 77/103 (74%), Positives = 87/103 (84%)

Query: 4   VTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNAL 63
           VTD +S+YTLPST+MNH  HKS+KAAYSFYNV  +T  +DLM DAL+ AK +GFDVFNAL
Sbjct: 281 VTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNAL 340

Query: 64  DLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 106
           DLMENK FL  LKFGIGDGNLQYYLYNWKCPS+   K+GLVLQ
Sbjct: 341 DLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 383


>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 Length = 496 Back     alignment and structure
>4a95_A Glycylpeptide N-tetradecanoyltransferase; malaria; HET: 9MT NHM; 1.55A {Plasmodium vivax} Length = 384 Back     alignment and structure
>2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* Length = 421 Back     alignment and structure
>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A Length = 392 Back     alignment and structure
>1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* Length = 422 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query106
3iu1_A383 Glycylpeptide N-tetradecanoyltransferase 1; N-myri 100.0
2wuu_A421 N-myristoyltransferase; acyltransferase; HET: NHM; 100.0
1iic_A422 Peptide N-myristoyltransferase; HET: MYA; 2.20A {S 100.0
1iyk_A392 Myristoyl-COA:protein N-myristoyltransferase; HET: 100.0
1rxt_A496 Myristoyl-, glycylpeptide N-tetradecanoyltransfera 100.0
4b14_A385 Glycylpeptide N-tetradecanoyltransferase; malaria, 100.0
3t90_A149 Glucose-6-phosphate acetyltransferase 1; GNAT fold 85.01
2vez_A190 Putative glucosamine 6-phosphate acetyltransferase 80.52
>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-52  Score=343.13  Aligned_cols=105  Identities=73%  Similarity=1.189  Sum_probs=104.0

Q ss_pred             CccceEEEEeecCeeeeecCccceeeeeeeEEEeecCCCHHHHHHHHHHHHHhcCCcEEEeeccccCccccccCCCcccc
Q psy14931          2 TSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGD   81 (106)
Q Consensus         2 ~~itDf~SFY~lpstvl~~~~~~~l~aAY~~Y~~~~~~~l~~L~~daLi~Ak~~gfDVfNaLdim~N~~fL~~lKF~~Gd   81 (106)
                      |+||||+|||+||||||+|++|++|+|||+||+++|++++++||+||||+||+.|||||||||+|+|+.||++||||+||
T Consensus       279 g~ITDf~SFY~Lpstvl~~~~~~~l~aAY~fY~~~t~~~l~~Lm~DaLi~Ak~~gfDVFNaL~~m~N~~fL~~lKFg~Gd  358 (383)
T 3iu1_A          279 GEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGD  358 (383)
T ss_dssp             SCEEEEEEEEECCEEETTCSSCCEECEEEECCCBCSSSCHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred             CcEeeEEEEEEccceecCCCCcceeeeEEEEEEeecCCCHHHHHHHHHHHHHHcCCeEEEcccccccHHHHHHcCCCCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEEEeecCCCCCCCCceeEEcC
Q psy14931         82 GNLQYYLYNWKCPSIPPNKIGLVLQ  106 (106)
Q Consensus        82 G~L~YYLyNw~~~~i~~~~vglvl~  106 (106)
                      |+|||||||||||+|+|++||+|||
T Consensus       359 G~L~YYLyNwr~~~~~~~~vglvl~  383 (383)
T 3iu1_A          359 GNLQYYLYNWKCPSMGAEKVGLVLQ  383 (383)
T ss_dssp             EEEEEEEESCBCCCBCGGGBCCCCC
T ss_pred             CceEEEEeeccCCCCChhHeeEEeC
Confidence            9999999999999999999999997



>2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* Back     alignment and structure
>1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* Back     alignment and structure
>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A Back     alignment and structure
>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 Back     alignment and structure
>4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* Back     alignment and structure
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} Back     alignment and structure
>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 106
d1rxta2201 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT 9e-55
d1iyka2227 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT 2e-48
d1iica2237 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT 2e-47
>d1rxta2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} Length = 201 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  166 bits (423), Expect = 9e-55
 Identities = 76/103 (73%), Positives = 87/103 (84%)

Query: 4   VTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNAL 63
           VTD +S+YTLPST+MNH  HKS+KAAYSFYNV  +T  +DLM DAL+ AK +GFDVFNAL
Sbjct: 99  VTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNAL 158

Query: 64  DLMENKEFLGPLKFGIGDGNLQYYLYNWKCPSIPPNKIGLVLQ 106
           DLMENK FL  LKFGIGDGNLQYYLYNWKCPS+   K+G+VLQ
Sbjct: 159 DLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGIVLQ 201


>d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} Length = 227 Back     information, alignment and structure
>d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 237 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query106
d1rxta2201 N-myristoyl transferase, NMT {Human (Homo sapiens) 100.0
d1iyka2227 N-myristoyl transferase, NMT {Yeast (Candida albic 100.0
d1iica2237 N-myristoyl transferase, NMT {Baker's yeast (Sacch 100.0
d2euia1153 Probable acetyltransferase PA4026 {Pseudomonas aer 80.95
>d1rxta2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=8.8e-56  Score=336.33  Aligned_cols=105  Identities=72%  Similarity=1.185  Sum_probs=104.0

Q ss_pred             CccceEEEEeecCeeeeecCccceeeeeeeEEEeecCCCHHHHHHHHHHHHHhcCCcEEEeeccccCccccccCCCcccc
Q psy14931          2 TSVTDMVSYYTLPSTVMNHEVHKSIKAAYSFYNVSFKTKWVDLMQDALITAKNEGFDVFNALDLMENKEFLGPLKFGIGD   81 (106)
Q Consensus         2 ~~itDf~SFY~lpstvl~~~~~~~l~aAY~~Y~~~~~~~l~~L~~daLi~Ak~~gfDVfNaLdim~N~~fL~~lKF~~Gd   81 (106)
                      |+||||+|||+|||+|+++++|++++|||+||+++|+++|++||+||||+||+.|||||||||+|||++||++||||+||
T Consensus        97 g~itDf~SFY~lpstvi~~~~~~~l~aAY~fY~~~~~~~l~~Li~Dali~Ak~~~fDVfNaL~i~dN~~fL~~lKFg~Gd  176 (201)
T d1rxta2          97 GEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGD  176 (201)
T ss_dssp             SCCCCEEEEECCCBCCCSCSSCCCCCBCCCCCEECSSSCTTTHHHHHHHHHHHTTCSBCCCCCCTTHHHHTTTSSCCCCS
T ss_pred             CcEeeEEEEEEcchhhhCCcccceeeeEEEEEEeecCCcHHHHHHHHHHHHHHcCCcEEEecchhcCHHHHHHCCCccCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEEEeecCCCCCCCCceeEEcC
Q psy14931         82 GNLQYYLYNWKCPSIPPNKIGLVLQ  106 (106)
Q Consensus        82 G~L~YYLyNw~~~~i~~~~vglvl~  106 (106)
                      |+|||||||||||+|+|++||+|||
T Consensus       177 G~L~YYLyNw~~~~i~p~~iglvl~  201 (201)
T d1rxta2         177 GNLQYYLYNWKCPSMGAEKVGIVLQ  201 (201)
T ss_dssp             CCCEEEESSCCCCCCCTTTBCCCCC
T ss_pred             CcEEEEEEeccCCCCCHHHceEEeC
Confidence            9999999999999999999999997



>d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure