Psyllid ID: psy15069

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-
Protein Sequence
DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKKLSSES
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHcHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLcsgpissafvnkygcrnvTICGAILGSACLAVSVFAKNVITLCITIgfgtglgfgliylpaivSVTCYFERLRSLATGIAVCgsglgtiifaPIIDYTVREYGWKITLLVLSVTVLSAVLFGIllrpleeqpveepvedgalphlRIIIFEVKPKQRALTAVStsiwqpstaistgptevistqaqidskatvpesestedkttclnlsdDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAeqrgvtrsnASSLISIVGAANMVSRVILGYisdrpcvnrlyIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIaslvgppiagflydstlsyspafflagGAIFVSGVMLFVIPSLQSYLLKRKEKKLSSES
Flexible Loop (DISEMBL)
dgvtysfgILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAvstsiwqpstaistgptevISTQaqidskatvpesestedkttclnlsddTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQsyllkrkekklsses
Low Complexity Region (SEG)
DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVitlcitigfgtglgfgliYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKItllvlsvtvlsavlFGIllrpleeqpveepveDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQsyllkrkekklsses
Disordered region (IsUnstruct)
**VTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQP**********************************************LREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLL***********
Disordered Region (DISOPRED)
DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQP********ALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL****************
Disordered Region (DISEMBL)
DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQ********************CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLL***********
Disordered Region (DISPRO)
DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQ*****************************************************************************SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRK********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKKLSSES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	461	2.2.26 [Sep-21-2011]
Q8K1C7	512	Monocarboxylate transport	yes	N/A	0.926	0.833	0.282	4e-50
Q8R0M8	500	Monocarboxylate transport	no	N/A	0.941	0.868	0.276	5e-49
Q7RTX9	510	Monocarboxylate transport	yes	N/A	0.939	0.849	0.283	7e-49
Q6ZSM3	486	Monocarboxylate transport	no	N/A	0.865	0.820	0.310	2e-47
Q503M4	477	Monocarboxylate transport	no	N/A	0.885	0.855	0.300	3e-47
Q8BGC3	486	Monocarboxylate transport	no	N/A	0.835	0.792	0.302	5e-47
Q6P2X9	473	Monocarboxylate transport	no	N/A	0.848	0.826	0.304	5e-47
O15374	487	Monocarboxylate transport	no	N/A	0.932	0.882	0.273	7e-47
Q6GM59	460	Monocarboxylate transport	N/A	N/A	0.824	0.826	0.296	1e-46
B1AT66	607	Monocarboxylate transport	no	N/A	0.928	0.705	0.278	1e-45

>sp|Q8K1C7|MOT14_MOUSE Monocarboxylate transporter 14 OS=Mus musculus GN=Slc16a14 PE=2 SV=1

 Score =  199 bits (505), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 230/481 (47%), Gaps = 54/481 (11%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
           G   + G+L +E+ + F +  G+T+W++S+ +G+TL  GP    F+N  GCR   I G +
Sbjct: 51  GSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAIIGGL 110

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           + S    +S +A NV +L IT G   GLG G+ YLPA+V V  YF++ R+LA G++  G+
Sbjct: 111 VNSLGWVLSAYAANVQSLFITFGVAAGLGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGT 170

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVE---EPVEDGA 178
           G GT +   ++ Y   EYGW+  + +     L+  + G L+RPL  + +E   E  E  A
Sbjct: 171 GFGTFLMTVLLKYLCAEYGWRNAMFIQGALSLNLCVCGALMRPLSPEKLENCPEAEEPCA 230

Query: 179 LPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQ--------IDSKATV 230
           LP                 A ST      +  S GP  +   Q +         D +   
Sbjct: 231 LP-----------------AYST-----ESVKSGGPLGMAEEQDRRPGNEEMVCDLQTQE 268

Query: 231 PESESTEDKTTCL-----NLSDDTKQTLREMLDME--------LLRDPIFILFTISNIFT 277
            + ++   K  C       +S  T Q  R   D          L  + +F+ F    +F 
Sbjct: 269 CQGQTHPRKNVCAFRVLKTVSQLTVQVRRGFRDWHSGYFGTASLFTNRMFVAFIFWALFA 328

Query: 278 SIGFNVPYVYIVKLAEQRGVTRSNAS-SLISIVGAANMVSRVILGYISDRPCV---NRLY 333
              F +P++++ ++     ++  N +  L SI+   ++  +VILG ++D PC+   N   
Sbjct: 329 YSSFVIPFIHLPEIVSLYNLSEQNDTFPLTSIIAILHIFGKVILGAVADLPCISVWNVFL 388

Query: 334 IYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAF 393
           I N  L +   +  +    + Y  LA+   + G   G Y  L  V+  DL+G + L NA+
Sbjct: 389 IANFTLVL---SIFLLPLMHTYASLAVICALIGFSSG-YFSLMPVVTEDLVGTEHLANAY 444

Query: 394 GLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRK 453
           G+++   GI++L+GPP AG+++D T  Y  +F++ G    V  + L + P +Q     R+
Sbjct: 445 GIIICANGISALLGPPFAGWIFDITQKYDFSFYICGLLYMVGILFLLIQPCIQMIDQSRR 504

Query: 454 E 454
           +
Sbjct: 505 K 505

Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates.
Mus musculus (taxid: 10090)

>sp|Q8R0M8|MOT5_MOUSE Monocarboxylate transporter 5 OS=Mus musculus GN=Slc16a4 PE=2 SV=1

 Score =  196 bits (497), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 226/481 (46%), Gaps = 47/481 (9%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
           G+T +F I F+ F + F+       WI SI+  +   +GP+++   +  G +  +I G  
Sbjct: 36  GMTKTFAIFFVVFQEEFEGTSEQIGWIGSIMSSLRFSAGPLAAIICDVLGEKATSILGTF 95

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           L S    +S +A  +  LC+T+G   GLG   +Y  A V +T YF++   L+T IA  G 
Sbjct: 96  LVSGGYVISSWATGIPFLCVTMGLLPGLGSAFLYQVAAVVITKYFKKRLGLSTAIARSGM 155

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPH 181
           GL T + AP   + +  Y W   L++    +L+ V   +LLRP+  Q             
Sbjct: 156 GL-TFLLAPFTKFLIDLYDWTGALILFGAIILNLVPSSMLLRPIHSQSNNNS-------- 206

Query: 182 LRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241
                 +++ K   L+A      +P  +  T  ++   TQ      +T+ +SE      T
Sbjct: 207 ------DIENKGSILSAT-----EPEASYKTETSKCKETQEPFIKDSTMKKSEQPTTTLT 255

Query: 242 CL-NLSDD------------------TKQTL------REMLDMELLRDPIFILFTISNIF 276
            L N S++                   K+        +++LD+ L R+P F +FT S + 
Sbjct: 256 VLGNQSEEFSNRPHRNRPLLMSNGKSHKKKFVSWNCKQKLLDISLFRNPFFYIFTWSFLL 315

Query: 277 TSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYN 336
           + + + +P  ++V  A+  G+   +AS L+S+ G    VS++I G+I+D+  + +   + 
Sbjct: 316 SQLAYFIPTFHLVARAKTLGIDVMDASYLVSVAGITETVSQLISGWIADQNWIKKYQYHK 375

Query: 337 GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLL 396
             L +CG   ++      +  L  Y  +F    G Y+ L   +LVDL    R+    G  
Sbjct: 376 SYLILCGVTNLLAPLATTFPLLMAYTILFAIFAGGYLALILPVLVDLSKNSRVHKFLGYA 435

Query: 397 LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKK 456
             F GIA L GPPIAG++YD T +Y+ +F+ +G    +S V LF +P  + +  KRK+  
Sbjct: 436 SFFAGIAVLSGPPIAGWIYDYTQTYTGSFYFSGTCYILSSVSLFFVPLAERW--KRKQSD 493

Query: 457 L 457
           L
Sbjct: 494 L 494

Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate.

Mus musculus (taxid: 10090)

>sp|Q7RTX9|MOT14_HUMAN Monocarboxylate transporter 14 OS=Homo sapiens GN=SLC16A14 PE=2 SV=1

 Score =  195 bits (495), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 233/477 (48%), Gaps = 44/477 (9%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
           G   + G+L +E+ + F +  G+T+W++S+ +G+TL  GP    F+N  GCR   I G +
Sbjct: 49  GSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAIIGGL 108

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           + S    +S +A NV  L IT G   GLG G+ YLPA+V V  YF++ R+LA G++  G+
Sbjct: 109 VNSLGWVLSAYAANVHYLFITFGVAAGLGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGT 168

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPH 181
           G GT +   ++ Y   EYGW+  +L+     L+  + G L+RPL   P + P + G    
Sbjct: 169 GFGTFLMTVLLKYLCAEYGWRNAMLIQGAVSLNLCVCGALMRPLS--PGKNPNDPG---- 222

Query: 182 LRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTE-----VISTQAQIDSKATVPESEST 236
                   +   R L A ST      +    G TE     + + +   D +A     ++ 
Sbjct: 223 --------EKDVRGLPAHSTE--SVKSTGQQGRTEEKDGGLGNEETLCDLQAQECPDQAG 272

Query: 237 EDKTTCLN--LSDDTKQTLREMLDME-----------LLRDPIFILFTISNIFTSIGFNV 283
             K  C    L   +  T+R     E           L  + +F+ F    +F    F +
Sbjct: 273 HRKNMCALRILKTVSWLTMRVRKGFEDWYSGYFGTASLFTNRMFVAFIFWALFAYSSFVI 332

Query: 284 PYVYIVKLAEQRGVTRSN-ASSLISIVGAANMVSRVILGYISDRPCV---NRLYIYNGCL 339
           P++++ ++     ++  N    L SI+   ++  +VILG I+D PC+   N   + N  L
Sbjct: 333 PFIHLPEIVNLYNLSEQNDVFPLTSIIAIVHIFGKVILGVIADLPCISVWNVFLLANFTL 392

Query: 340 AICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF 399
            +   +  I    + Y  LA+   + G   G Y  L  V+  DL+G++ L NA+G+++  
Sbjct: 393 VL---SIFILPLMHTYAGLAVICALIGFSSG-YFSLMPVVTEDLVGIEHLANAYGIIICA 448

Query: 400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKK 456
            GI++L+GPP AG++YD T  Y  +F++ G    +  + L + P ++  ++++  +K
Sbjct: 449 NGISALLGPPFAGWIYDITQKYDFSFYICGLLYMIGILFLLIQPCIR--IIEQSRRK 503

Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates.

Homo sapiens (taxid: 9606)

>sp|Q6ZSM3|MOT12_HUMAN Monocarboxylate transporter 12 OS=Homo sapiens GN=SLC16A12 PE=2 SV=2

 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 222/460 (48%), Gaps = 61/460 (13%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
            VT    I F+EF   F +    T+WI SI+  VT+   P+ S   N   C+   + G +
Sbjct: 34  AVTRCISIFFVEFQTYFTQDYAQTAWIHSIVDCVTMLCAPLGSVVSNHLSCQVGIMLGGL 93

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           L S  L +S FA ++  L +T+G  TGLGF L Y PAI  V  YF R ++LA GIA+ GS
Sbjct: 94  LASTGLILSSFATSLKHLYLTLGVLTGLGFALCYSPAIAMVGKYFSRRKALAYGIAMSGS 153

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPH 181
           G+GT I AP++   + ++ W+  LL+L   VL+  + G L+RP+  +      ED     
Sbjct: 154 GIGTFILAPVVQLLIEQFSWRGALLILGGFVLNLCVCGALMRPITLK------ED----- 202

Query: 182 LRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTED-KT 240
                    P+Q                       V  TQ + D K   P S  T++   
Sbjct: 203 ------HTTPEQN---------------------HVCRTQKE-DIKRVSPYSSLTKEWAQ 234

Query: 241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS 300
           TCL         L++     L+ D  F++  +S +F + G +  +VY+V  A   GV+  
Sbjct: 235 TCLCCC------LQQEYSFLLMSD--FVVLAVSVLFMAYGCSPLFVYLVPYALSVGVSHQ 286

Query: 301 NASSLISIVGAANMVSRVILGYISDRPCV-NRLYIYNGCLAICGAATVICAFCYNYVE-- 357
            A+ L+SI+G  +++  +  G+++DR C+ N  Y+   C         +C  C   ++  
Sbjct: 287 QAAFLMSILGVIDIIGNITFGWLTDRRCLKNYQYV---CYLFAVGMDGLCYLCLPMLQSL 343

Query: 358 --LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY 415
             L  ++  FG   GAYV L  V+  +++G   L++A G++     +  LV PPIAG L 
Sbjct: 344 PLLVPFSCTFGYFDGAYVTLIPVVTTEIVGTTSLSSALGVVYFLHAVPYLVSPPIAGRLV 403

Query: 416 DSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEK 455
           D+T SY+ AF L G ++  S V+L       + L+KR  K
Sbjct: 404 DTTGSYTAAFLLCGFSMIFSSVLLGF-----ARLIKRMRK 438

Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates.

Homo sapiens (taxid: 9606)

>sp|Q503M4|MT12B_DANRE Monocarboxylate transporter 12-B OS=Danio rerio GN=slc16a12b PE=2 SV=1

 Score =  189 bits (481), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 221/462 (47%), Gaps = 54/462 (11%)

Query: 3   VTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAIL 62
           VT    I F+EF   F +    T+WI S++   T+   P+ S   N+  CR   I G  L
Sbjct: 35  VTRCISIFFVEFQMHFAKDYSGTAWIHSLVDCTTMLCAPLGSLIGNQLSCRIAVILGGFL 94

Query: 63  GSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSG 122
            S  L +S FA ++  L  T+G  TGLGF L Y PAI  V  YF   ++LA GIA+ GSG
Sbjct: 95  ASVGLVLSSFATSLEYLYATLGLLTGLGFALCYTPAIAMVGIYFCERKALAYGIAMSGSG 154

Query: 123 LGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL---EEQPVEEPVEDGAL 179
           +GT I AP++   +  Y W+  LL+L   VL+  + G LLRP+   EE+    PV+    
Sbjct: 155 IGTFILAPVVQLLIEHYSWRGALLILGGFVLNLCVCGALLRPIILKEEEACPLPVDSEC- 213

Query: 180 PHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239
                  + VKP                  ++ GPT   +                    
Sbjct: 214 ------GYSVKPP----------------TLNGGPTRSAA-------------------- 231

Query: 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTR 299
                 SD  ++  + M +   L  P F++   S +  + G ++P+VY+V  A   GV  
Sbjct: 232 ------SDAKQRCFQSMQEYHFLLMPDFLVLAGSFLLLASGCSLPFVYLVPYALDVGVGH 285

Query: 300 SNASSLISIVGAANMVSRVILGYISDRPCVN--RLYIYNGCLAICGAATVICAFCYNYVE 357
            +A+ L+SI+G  ++V  +  G+++DR C+   R   Y   + + G   +       +V 
Sbjct: 286 QHAAFLMSILGVIDIVGNITFGWLTDRRCLKKYRNICYMFAVGMEGLCCLFIPLLRTFVW 345

Query: 358 LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS 417
           L  ++ ++G   GAYV L  V+  D++G   L++A G++     +  LV PPI G+L D+
Sbjct: 346 LVPFSVLYGYFDGAYVALIPVVTSDVVGRQYLSSALGVVYFLHAVPYLVSPPIGGWLVDT 405

Query: 418 TLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKKLSS 459
           T +Y+  FFL+G A+  S ++LF +  ++     +K+  LS 
Sbjct: 406 TGTYTATFFLSGFALISSSLLLFSVAIIRYCQRNQKKNSLSK 447

Proton-linked monocarboxylate transporter.

Danio rerio (taxid: 7955)

>sp|Q8BGC3|MOT12_MOUSE Monocarboxylate transporter 12 OS=Mus musculus GN=Slc16a12 PE=2 SV=1

 Score =  189 bits (479), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 216/447 (48%), Gaps = 62/447 (13%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
            VT    I F+EF   F +    T+WI SI+  +T+   P+ S   N+  C+   + G +
Sbjct: 34  AVTRCISIFFVEFQTYFAQDYSQTAWIHSIVDCMTMLCAPLGSVVSNQLSCQAGIMLGGL 93

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           L S    +  FA ++  L +++G  TGLGF L Y PAI  V  YF R ++LA GIA+ GS
Sbjct: 94  LASTGFILGSFATSLKHLYLSLGVLTGLGFALCYSPAIAMVGKYFSRRKALAYGIAMSGS 153

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPH 181
           G+GT I AP++   + ++ W+  LL+L   VL+  + G L+RP+  +      ED ++P 
Sbjct: 154 GIGTFILAPVVQLLIEQFSWRGALLILGGFVLNLCVCGALMRPITLK------EDRSVPE 207

Query: 182 LRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPES----ESTE 237
                   +  QR                              D K   P S    E TE
Sbjct: 208 KN----HNRESQRE-----------------------------DCKQASPYSPLTKECTE 234

Query: 238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGV 297
            +  C         +L++     L+ D  F++  +S +F + G +  +VY+V  A   GV
Sbjct: 235 TRLCC---------SLQQEYGFLLMSD--FVVLAVSVLFMAYGCSPLFVYLVPYALSVGV 283

Query: 298 TRSNASSLISIVGAANMVSRVILGYISDRPCV-NRLYIYNGCLAICGAATVICAFCYNYV 356
           +   A+ L+SI+G  ++V  +  G+++DR C+ N  Y+   C     A   +C  C   +
Sbjct: 284 SHHQAAFLMSILGVIDIVGNITFGWLTDRRCLKNYRYV---CYLFAVALDGLCYLCLPML 340

Query: 357 E----LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG 412
           +    L  ++  FG   GAYV L  V+  +++G   L++A G++     +  LV PPIAG
Sbjct: 341 QTFPLLVPFSCTFGYFDGAYVTLIPVVTAEIVGTTSLSSALGVVYFLHAVPYLVSPPIAG 400

Query: 413 FLYDSTLSYSPAFFLAGGAIFVSGVML 439
           +L D+T SY+ AF L G A+  S ++L
Sbjct: 401 WLVDTTGSYTAAFLLCGFAMIFSSILL 427

Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates.

Mus musculus (taxid: 10090)

>sp|Q6P2X9|MOT12_XENTR Monocarboxylate transporter 12 OS=Xenopus tropicalis GN=slc16a12 PE=2 SV=1

 Score =  189 bits (479), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 216/443 (48%), Gaps = 52/443 (11%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
            VT    I F+EF   F +    T+WI SI+   T+   PI S   N + C+   I G +
Sbjct: 34  AVTRCISIFFVEFQSYFAQDYARTAWIHSIVDCSTMLCAPIGSYVSNHFSCQVGIILGGV 93

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           L S  L +S FA ++  L +T+G  TGLGF L Y PAI  V  YFE+ ++LA GIA+ GS
Sbjct: 94  LASTGLVLSSFATSLEYLYLTLGVLTGLGFALCYSPAIAMVGKYFEKRKALAYGIAMSGS 153

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP--LEEQPVEEPVEDGAL 179
           G+GT I AP++   + ++ W+  LL+L   V +  + G L+RP  L+E  +  P++   +
Sbjct: 154 GIGTFILAPVVQLLIEQFSWRGALLILGGFVSNLCVCGALMRPITLKEDSLHYPLKQEQM 213

Query: 180 PHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239
                   E +P Q                             ++DS  + P  +    K
Sbjct: 214 --------ENEPTQ---------------------------SGRLDSSCS-PLCQDCSHK 237

Query: 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTR 299
             C      TK+      +   L  P F++  +S +F + G + P+VY+V  A   GV+ 
Sbjct: 238 RLCYC----TKK------EYSFLLKPKFMVLAVSFLFLAYGCSPPFVYLVPYALNVGVSN 287

Query: 300 SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF---CYNYV 356
             A+ L+SI+G  ++V  +  G+++D   + + + Y   L   G   + C F      + 
Sbjct: 288 QEAAFLMSILGIIDIVGNITFGWVTDTRFLKK-HRYCCYLIAVGLDGLCCLFLPILTRFQ 346

Query: 357 ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD 416
            L  ++ +FG   GAYV L  V+  D++G   L++A G++     +  LV PPIAG+L D
Sbjct: 347 LLVPFSVMFGYFDGAYVALIPVVTGDVVGTSSLSSALGVVFFLHAVPYLVSPPIAGWLVD 406

Query: 417 STLSYSPAFFLAGGAIFVSGVML 439
           +T  Y+ AF L+G ++    V+L
Sbjct: 407 TTGDYTAAFLLSGFSMIFCAVLL 429

Proton-linked monocarboxylate transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O15374|MOT5_HUMAN Monocarboxylate transporter 5 OS=Homo sapiens GN=SLC16A4 PE=2 SV=1

 Score =  188 bits (478), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 222/464 (47%), Gaps = 34/464 (7%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
           G+T +F I F+ F + F+       WI SI+  +  C+GP+ +   +  G +  +I GA 
Sbjct: 36  GMTKTFAIFFVVFQEEFEGTSEQIGWIGSIMSSLRFCAGPLVAIICDILGEKTTSILGAF 95

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           + +    +S +A ++  LC+T+G   GLG   +Y  A V  T YF++  +L+T IA  G 
Sbjct: 96  VVTGGYLISSWATSIPFLCVTMGLLPGLGSAFLYQVAAVVTTKYFKKRLALSTAIARSGM 155

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPH 181
           GL T + AP   + +  Y W   L++     L+ V   +LLRP+    ++     G    
Sbjct: 156 GL-TFLLAPFTKFLIDLYDWTGALILFGAIALNLVPSSMLLRPIH---IKSENNSG---- 207

Query: 182 LRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKA-------TVPESE 234
                  +K K  +L+A        +T      TE  + +     KA       TV +++
Sbjct: 208 -------IKDKGSSLSAHGPE--AHATETHCHETEESTIKDSTTQKAGLPSKNLTVSQNQ 258

Query: 235 STE-----DKTTCLNLSDDTKQTL-----REMLDMELLRDPIFILFTISNIFTSIGFNVP 284
           S E     ++   L  SD+    +     +++ D+ L R+P F +FT S + + + + +P
Sbjct: 259 SEEFYNGPNRNRLLLKSDEESDKVISWSCKQLFDISLFRNPFFYIFTWSFLLSQLAYFIP 318

Query: 285 YVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344
             ++V  A+  G+   +AS L+S+ G    VS++I G+++D+  + + + +   L +CG 
Sbjct: 319 TFHLVARAKTLGIDIMDASYLVSVAGILETVSQIISGWVADQNWIKKYHYHKSYLILCGI 378

Query: 345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIAS 404
             ++      +  L  Y   F    G Y+ L   +LVDL     +    GL   F G+A 
Sbjct: 379 TNLLAPLATTFPLLMTYTICFAIFAGGYLALILPVLVDLCRNSTVNRFLGLASFFAGMAV 438

Query: 405 LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSY 448
           L GPPIAG+LYD T +Y+ +F+ +G    +S V  F +P  + +
Sbjct: 439 LSGPPIAGWLYDYTQTYNGSFYFSGICYLLSSVSFFFVPLAERW 482

Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate.

Homo sapiens (taxid: 9606)

>sp|Q6GM59|MOT12_XENLA Monocarboxylate transporter 12 OS=Xenopus laevis GN=slc16a12 PE=2 SV=1

 Score =  188 bits (477), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 212/445 (47%), Gaps = 65/445 (14%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
            VT    I F+EF   F +    T+WI SI+   T+   PI S   N + C+   I G +
Sbjct: 34  AVTRCISIFFVEFQSYFAQDYARTAWIHSIVDCSTMLCAPIGSYVSNHFSCQVGIILGGV 93

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           L S  L +S FA ++  L +T+G  TGLGF L Y PAI  V  YFE+ ++LA GIA+ GS
Sbjct: 94  LASTGLVLSSFATSLEYLYLTLGVLTGLGFALCYSPAIAMVGKYFEKRKALAYGIAMSGS 153

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP--LEEQPVEEPVEDGAL 179
           G+GT I AP++   + ++ W+  LL+L   V +  + G L+RP  L+E  +  P++    
Sbjct: 154 GIGTFILAPVVQLLIEQFSWRGALLILGGFVSNLCVCGALMRPISLKEDSLHYPLKR--- 210

Query: 180 PHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239
                                                    + Q+DS  + P  +    K
Sbjct: 211 -----------------------------------------EPQLDSSCS-PLCQDCSHK 228

Query: 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTR 299
             C   + +             L  P FI+  +S +F + G + P+VY+V  +   GV+ 
Sbjct: 229 KLCYCTTKE----------YHFLLKPKFIILAVSFLFLAYGCSPPFVYLVPYSLSVGVSH 278

Query: 300 SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF-----CYN 354
             A+ L+SI+G  ++V  +  G+++DR  + + + Y   L   G   + C F     C+ 
Sbjct: 279 QEAAFLMSILGIVDIVGNITFGWVTDRRFLKK-HRYCCYLIAVGLDGLCCLFLPILTCFQ 337

Query: 355 YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL 414
              L  ++ +FG   GAYV L  VI  D++G   L++A G++     +  L+ PPIAG+L
Sbjct: 338 L--LVPFSVMFGYFDGAYVALIPVITGDVVGTSNLSSALGVVFFLHAVPYLLSPPIAGWL 395

Query: 415 YDSTLSYSPAFFLAGGAIFVSGVML 439
            D+T  Y+ AF L+G ++    ++L
Sbjct: 396 VDTTGDYTAAFLLSGFSMIFCSILL 420

Proton-linked monocarboxylate transporter.

Xenopus laevis (taxid: 8355)

>sp|B1AT66|MOT7_MOUSE Monocarboxylate transporter 7 OS=Mus musculus GN=Slc16a6 PE=1 SV=1

 Score =  184 bits (467), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 227/445 (51%), Gaps = 17/445 (3%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
           G+  SFG+ F +    F E +   SWI SI V V   + P+S+   N++G R V + G +
Sbjct: 124 GIIKSFGVFFNDLMDSFDESNSKISWIISICVFVLTFTAPLSTVLSNRFGHRLVVMAGGL 183

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           L S  +  + F++ V  + I+IG  +GLG+   +LP +  ++ YF++ RS+ T +A  G 
Sbjct: 184 LISLGMITASFSQRVYHMYISIGVISGLGYCFSFLPTVTILSQYFDKRRSVVTAVASTGE 243

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQ-PVEEPVEDGALP 180
                 FAP I       GW+ +LL + +  L+ ++ G LLRP+  Q P + P      P
Sbjct: 244 CFAVFAFAPAITALKEHIGWRYSLLFVGLLQLNIMVCGALLRPIIIQGPGQSPKAVTLEP 303

Query: 181 HLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT 240
              +       K R      TSI     +I +G  E+ ++   + S+A + E E+  ++ 
Sbjct: 304 RREVQYMLENEKTR------TSI----DSIDSG-VELTTSPKNVPSEAKM-EQETRAEQQ 351

Query: 241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS 300
             L  +    Q    +LD  +L++  FI + +  +F ++GF  P +YI+ L    G+   
Sbjct: 352 QTLVTAPKHSQMKAPLLDFSVLKEKSFICYALFGLFATLGFFAPSLYIIPLGISLGIDPD 411

Query: 301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAI 360
            A+ L+S +  A +  R+  G++ +R  + ++YI   C+ +  A+     F   +  L +
Sbjct: 412 RAAFLLSTMAIAEVFGRIGAGFVLNREPIRKIYIELICVILLTASLFAFTFATEFWGLML 471

Query: 361 YAGVFGAMIGAYVGLTSVILV---DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS 417
            +  FG+M+G  +G T + ++   D++G++++++A G+ +  Q I+ L GPP+AG L D 
Sbjct: 472 CSVFFGSMVGT-IGGTHIPMLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQ 530

Query: 418 TLSYSPAFFLAGGAIFVSGVMLFVI 442
           +  YS AF+     + ++ V L ++
Sbjct: 531 SKIYSRAFYSCAAGMCLAAVCLALV 555

Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	461
350424237	499	PREDICTED: monocarboxylate transporter 1	0.934	0.863	0.539	1e-130
157117574	606	monocarboxylate transporter [Aedes aegyp	0.982	0.747	0.499	1e-128
340722653	561	PREDICTED: monocarboxylate transporter 1	0.980	0.805	0.498	1e-127
383850311	582	PREDICTED: monocarboxylate transporter 1	0.969	0.768	0.512	1e-127
156544259	578	PREDICTED: monocarboxylate transporter 1	0.997	0.795	0.467	1e-119
357611157	593	putative monocarboxylate transporter [Da	0.939	0.730	0.490	1e-118
170067840	598	monocarboxylate transporter [Culex quinq	0.982	0.757	0.466	1e-114
391342734	623	PREDICTED: monocarboxylate transporter 1	0.960	0.711	0.417	3e-98
405969993	590	Monocarboxylate transporter 9 [Crassostr	0.986	0.771	0.408	8e-98
443697234	509	hypothetical protein CAPTEDRAFT_62745, p	0.941	0.852	0.428	1e-95

>gi|350424237|ref|XP_003493731.1| PREDICTED: monocarboxylate transporter 14-like [Bombus impatiens]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/454 (53%), Positives = 312/454 (68%), Gaps = 23/454 (5%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DGVTYSFG+ ++E    F+EG G T+WIASILVGVTLCSGPISS FVNK+GCR VTI G+
Sbjct: 63  DGVTYSFGVFYLELLYYFEEGKGATAWIASILVGVTLCSGPISSLFVNKFGCRAVTIAGS 122

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           IL SACL  S++A+N+ITL  TIG GTGLGFGLIYLPAIVSVTCYFE+ RSLATGIAVCG
Sbjct: 123 ILASACLLASMWARNIITLYFTIGIGTGLGFGLIYLPAIVSVTCYFEKYRSLATGIAVCG 182

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALP 180
           SGLGT+IFAP +DY +  YGW+  +L+ S  VL+  + G L RPL+   +++  +  +  
Sbjct: 183 SGLGTLIFAPCLDYFIATYGWRGAILICSGIVLNCTVLGALFRPLK---MDKRKKRSSTE 239

Query: 181 HLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT 240
                I+ V  ++    A   S+ QP          +IS     DS   + +        
Sbjct: 240 EQSKKIYSVSFRKENNHAGLKSLSQPV---------LISNNVIQDSLENIHKEHI----- 285

Query: 241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS 300
                 D      +E + + LL+DP+FILFT SN  TSIGF VPY+Y++  AE+RG+ + 
Sbjct: 286 ------DRKLNAFQEDVTISLLKDPVFILFTFSNFCTSIGFYVPYIYVLPQAEERGINKK 339

Query: 301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAI 360
           +AS L++I+G AN V R+ILGY+SD+P VNRL IYN CL ICG +T + AFC ++    +
Sbjct: 340 DASYLLAIIGIANTVGRIILGYVSDKPWVNRLLIYNLCLTICGISTTLSAFCTSFASFTL 399

Query: 361 YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS 420
           Y+ +FG   GAYVGLTSVILVDLLGL+RLTNAFG LLLFQG ASL+GPPIAG+LYD   S
Sbjct: 400 YSSIFGFTSGAYVGLTSVILVDLLGLNRLTNAFGQLLLFQGFASLLGPPIAGWLYDVLQS 459

Query: 421 YSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKE 454
           Y P FF AGG I +SG++LF IP++Q  + K  E
Sbjct: 460 YDPGFFTAGGMITISGLILFFIPTIQQKIHKNNE 493

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157117574|ref|XP_001658833.1| monocarboxylate transporter [Aedes aegypti] gi|108876004|gb|EAT40229.1| AAEL008028-PA [Aedes aegypti]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/533 (49%), Positives = 324/533 (60%), Gaps = 80/533 (15%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DG+TYSFG+ +++F   F EG G T+WIASILVGVTLCSGPISS+ VN++GCR VTI GA
Sbjct: 63  DGITYSFGMFYLKFLDYFNEGKGYTAWIASILVGVTLCSGPISSSLVNRFGCRAVTIAGA 122

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           IL +  LAVSVFA++V  L I+IGFGTG+G GLIYLPAIVSVT YFERLRSLATGIAVCG
Sbjct: 123 ILAAISLAVSVFAQSVFFLFISIGFGTGMGLGLIYLPAIVSVTMYFERLRSLATGIAVCG 182

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVL-SAVLFGILLRPLEEQPVE------EP 173
           SGLGT IFAP+ D  +   GW+  LLVLSV VL S  +FG + RPL   P E      +P
Sbjct: 183 SGLGTFIFAPVTDMLINTLGWQHALLVLSVIVLISCSIFGAMFRPLVASPDELEMAPMKP 242

Query: 174 VE-----------------DGALPHLRIIIFEVKPKQRALTAVSTS-------------- 202
           VE                 DG    +R   F   PK  AL A   S              
Sbjct: 243 VEGQSSAAASNGKANGEGGDGDQNIVRSHSFGNSPK-IALNANGKSTSGQSLQLALSQPL 301

Query: 203 IWQPSTAISTGPTEVISTQ--------------------AQIDSKATVPESESTEDKTT- 241
           + QP T     P  + ST                       I S+     S +T +K   
Sbjct: 302 LAQPPTYDHANPHTMGSTTIRRAESGTMYRKDALYTGSLHNISSRHASHASLATYEKGVY 361

Query: 242 --------------------CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGF 281
                               C+  S +T  T REM++  +L+DPIFI+FT+SN  TSIGF
Sbjct: 362 GSLQGNGKAIGSEEPVICCGCIRCSQETSDTFREMMNFSILKDPIFIVFTVSNFLTSIGF 421

Query: 282 NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAI 341
           NVPYVY+   A+   +    AS L+ I+G AN + R+ILGY+SD+P VNRL +YN  L I
Sbjct: 422 NVPYVYLAAQADVLQIDTKQASYLLGIIGIANTIGRIILGYLSDKPWVNRLLVYNLSLTI 481

Query: 342 CGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG 401
           CG AT     C ++  LA Y+ ++G  IGAYVGLTSVILVDLLGL++LTNAFGLLLLFQG
Sbjct: 482 CGVATAFSVMCLDFYSLATYSAIYGFTIGAYVGLTSVILVDLLGLEKLTNAFGLLLLFQG 541

Query: 402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKE 454
           IAS VGPP+AG+LYD TLSY+P F LAG  I +SGVMLF IP +Q YL K++ 
Sbjct: 542 IASFVGPPLAGWLYDITLSYNPGFILAGSTIALSGVMLFAIPPMQRYLAKKQS 594

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722653|ref|XP_003399718.1| PREDICTED: monocarboxylate transporter 14-like [Bombus terrestris]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/487 (49%), Positives = 316/487 (64%), Gaps = 35/487 (7%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DGVTYSFG+ ++E    F+EG G T+WIASILVGVTLCSGPISS FVNK+GCR VTI G+
Sbjct: 63  DGVTYSFGVFYLELLYYFEEGKGATAWIASILVGVTLCSGPISSLFVNKFGCRVVTIAGS 122

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           IL SACL  S++A+N+ITL  TIG GTGLGFGLIYLPAIVSVTCYFE+ RSLATGIAVCG
Sbjct: 123 ILASACLLASMWARNIITLYFTIGIGTGLGFGLIYLPAIVSVTCYFEKYRSLATGIAVCG 182

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLE-------------- 166
           SGLGT+IFAP +DY +  YGW+  +L+ S  VL+  + G L RPL               
Sbjct: 183 SGLGTLIFAPCLDYFIATYGWRGAILICSGIVLNCTVLGALFRPLRTDKRKKRSSTEKSS 242

Query: 167 EQPVEEPVE-------DGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVIS 219
           +     P E       +     +  + F+ +  +  L ++S  +   +  I      +  
Sbjct: 243 QNMKNNPGEYSNNLSNEEQSKKIYSVSFQKENNRAGLKSLSQPVLISNNVIQNSLENIHK 302

Query: 220 TQAQI------------DSKATVPES-ESTEDKTTCLNLSDDTK-QTLREMLDMELLRDP 265
               +             S  ++P   +  +       +S D K    +E + + LL+DP
Sbjct: 303 EHPNLMQGYSEEIFHIHKSSTSLPNKIDYIKAGNKEFKISIDRKLNAFQEDVTISLLKDP 362

Query: 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD 325
           +FILFT SN  TSIGF +PY+Y++  AE+RG+ + +AS L++I+G AN V R+ILGY+SD
Sbjct: 363 VFILFTFSNFCTSIGFYIPYIYVLPQAEERGINKKDASYLLAIIGIANTVGRIILGYVSD 422

Query: 326 RPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG 385
           +P VNRL IYN CL ICG +T + AFC ++    +Y+ +FG   GAYVGLTSVILVDLLG
Sbjct: 423 KPWVNRLLIYNLCLTICGISTTLSAFCTSFASFTLYSSIFGFTSGAYVGLTSVILVDLLG 482

Query: 386 LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL 445
           L+RLTNAFG LLLFQG ASL+GPPIAG+LYD   SY P FF AGG I +SG++LF IP++
Sbjct: 483 LNRLTNAFGQLLLFQGFASLLGPPIAGWLYDVLQSYDPGFFTAGGMITISGLILFFIPTI 542

Query: 446 QSYLLKR 452
           Q  + K 
Sbjct: 543 QQKIHKN 549

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850311|ref|XP_003700739.1| PREDICTED: monocarboxylate transporter 12-B-like [Megachile rotundata]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/480 (51%), Positives = 318/480 (66%), Gaps = 33/480 (6%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DGVTYSFG+ ++EF   F+EG G T+WIASILVGVTLCSGPISS FVNKYGCR VTI G+
Sbjct: 83  DGVTYSFGVFYLEFLYYFEEGKGTTAWIASILVGVTLCSGPISSLFVNKYGCRTVTIVGS 142

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           IL SACL  SV+A+NVITL  TIG GTGLGFGLIYLPAIVSVTCYFE+ RSLATGIAVCG
Sbjct: 143 ILASACLLASVWAQNVITLYFTIGIGTGLGFGLIYLPAIVSVTCYFEKYRSLATGIAVCG 202

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPV------EEPV 174
           SGLGT+IFAP + Y + EYGW+  +++ S  VL+ ++ G L RPLE          E+ +
Sbjct: 203 SGLGTLIFAPCLKYFIVEYGWRGAIMICSGIVLNCIVLGALFRPLETNKQKKRSSPEKTL 262

Query: 175 EDGALPHLRII--------IFEVKPKQRALTAVSTSIWQP---STAISTGPTEVISTQAQ 223
            +     L+ +        ++ +  K+        S+ QP   S  I+         + Q
Sbjct: 263 HNSLDQQLKCLPKGEHSTELYAISFKKERNNVGVRSLSQPILISKDITRQDNLENIHKEQ 322

Query: 224 IDSKATVPE---------------SESTEDKTTCLNLSDDTK-QTLREMLDMELLRDPIF 267
           ++      E               +E  + K     +++ TK  TL+E+LD+ LL++P+F
Sbjct: 323 LNLTQRYSEEVFSISESSTSLSTKAEYMKSKNGQFKINNKTKINTLQEILDISLLKNPVF 382

Query: 268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRP 327
           +LF  SN  TSIGF VPYVY++  AE+RG+ +++AS L++++G AN   R+ILGY+SD+P
Sbjct: 383 LLFIFSNFCTSIGFYVPYVYVLPQAEERGIDKNDASYLLAVIGIANTAGRIILGYVSDKP 442

Query: 328 CVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD 387
            VNRL IYN CL ICG +T++   C ++V   IYA +FG   GAYVGLTSVILVDLLGL+
Sbjct: 443 WVNRLLIYNLCLTICGISTMLSIICTSFVWFTIYASIFGFTSGAYVGLTSVILVDLLGLN 502

Query: 388 RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS 447
            LTNAFG LLLFQG AS +GPPIAG+LYD   SY P F  AG  I  SG++LF +P +Q 
Sbjct: 503 YLTNAFGQLLLFQGFASFLGPPIAGWLYDMLQSYDPGFLAAGSMITFSGLILFFVPIIQQ 562

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156544259|ref|XP_001606934.1| PREDICTED: monocarboxylate transporter 12-like [Nasonia vitripennis]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/522 (46%), Positives = 318/522 (60%), Gaps = 62/522 (11%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DGVTYS+GI   +F   F   D   SWI S+LVGVT CSGPISSA VN++GC+ VTI G 
Sbjct: 54  DGVTYSYGIFHADFLLYFGASDQAVSWITSLLVGVTYCSGPISSALVNRFGCQAVTIMGT 113

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           ++ SACL  SV+AK++  L  T G GTG GFGLIYLPAIVSVT YFE+ RSLATGIAVCG
Sbjct: 114 LVASACLLASVYAKDLTVLYFTAGIGTGFGFGLIYLPAIVSVTVYFEKYRSLATGIAVCG 173

Query: 121 SGLGTIIFAPIIDYTVREYG-WKITLLVLSVTVLSAVLFGILLRPLEEQ------PVEE- 172
           SGLGT++FAP I Y +  YG +K  +++LS  VL+ V+ GI+ RPLE        P++E 
Sbjct: 174 SGLGTVVFAPFISYLISVYGSYKSAMMILSAIVLNCVVLGIMFRPLEPVKSSECIPLKEV 233

Query: 173 ---------PVEDGALPHLRIIIF-------EVKPKQRALTAVSTSIWQPSTAISTGPTE 216
                      ED  L   R             K    + + +  ++ QP  A   G  +
Sbjct: 234 KSNGRTNLQSCEDAKLSLDRRSSMGAPKKYSNAKSSDNSSSNIRLALSQPILASKDGQQQ 293

Query: 217 V-----------------ISTQAQIDSKATVPESESTEDKTTCLNLS------------- 246
                             +  ++ I S     ES +  ++     LS             
Sbjct: 294 SEPFPRVSCGSGVMNRSDVFLRSSIHSIRKRSESLTNSEENMRFRLSLRSLPNGAGHRVV 353

Query: 247 -----DDTKQT---LREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVT 298
                +D  +    ++ ML ++LLRDP+FI+F++SN FTS+GFNVPYV++VK AE   + 
Sbjct: 354 DVAECEDENENPGIIKRMLQLDLLRDPVFIIFSLSNFFTSLGFNVPYVFLVKQAETHDID 413

Query: 299 RSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVEL 358
           +  AS LIS++G AN   R++LGYISD+P VNRL+IYN CL +CG +T    FC +++ L
Sbjct: 414 KETASMLISVIGFANTAGRIVLGYISDKPWVNRLFIYNVCLTVCGLSTAFSPFCTDFLTL 473

Query: 359 AIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST 418
           AIY+ +FG   GAYVGLTSV LVDL+GLDRLTNAFGL+LLFQGIAS +G PIAG+L D T
Sbjct: 474 AIYSAIFGFTAGAYVGLTSVCLVDLVGLDRLTNAFGLVLLFQGIASFLGAPIAGYLRDVT 533

Query: 419 LSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKKLSSE 460
            SY P F +AG  I  SG+MLFV+P LQ  LLK++EK+   E
Sbjct: 534 GSYDPGFSVAGIMIAASGLMLFVVPPLQRCLLKKEEKQQRIE 575

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357611157|gb|EHJ67333.1| putative monocarboxylate transporter [Danaus plexippus]

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/469 (49%), Positives = 307/469 (65%), Gaps = 36/469 (7%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DG+TYSFG+ + EF   F EG   T+WI SILVGVTL SGP+SS+FVN++GCR VT+ GA
Sbjct: 51  DGMTYSFGVFYAEFLTYFNEGQSKTAWIVSILVGVTLSSGPVSSSFVNRWGCRTVTVAGA 110

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           +L S C+  S FAKNV TL  TIG G G+GFGLIYLPAIVSVT +F+R RSLATGIAVCG
Sbjct: 111 LLSSVCVVASAFAKNVTTLIFTIGVGAGVGFGLIYLPAIVSVTVWFKRYRSLATGIAVCG 170

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALP 180
           SGLGT +FAPI D  +  YGW+  + ++   +L+ V  G++ R + E+P+  P+ +  LP
Sbjct: 171 SGLGTFLFAPITDALISNYGWRGAMALIGAFILNCVPLGLMFRAVPERPIT-PITEPMLP 229

Query: 181 H--------------------------LRIIIFEV---KP--KQRALTAVSTSIWQPSTA 209
                                       R+ + +    KP  +Q+  +   + I Q    
Sbjct: 230 KQNKSPLKRSQSSEQVVRANGKFEDDVARLTLSQPALNKPHEQQKPHSRQGSGIMQRPDV 289

Query: 210 ISTGPTEVISTQAQIDSKATVPESESTEDKTTC--LNLSDDTKQTLREMLDMELLRDPIF 267
           +  G    ++    +  +      +  E + +C  L  S+++K  L EMLD+ LL DP+F
Sbjct: 290 LYQGSMTSLARFRGVSPERVQLSFKREEREQSCGWLPCSEESKAALAEMLDISLLVDPVF 349

Query: 268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRP 327
           ILF +SN  TSIGF +PYVY V ++   G+   N++ LISI+GA+N+V R+ILGYISD+P
Sbjct: 350 ILFALSNFLTSIGFYIPYVYTVPMSAALGI--ENSAYLISIIGASNLVGRIILGYISDKP 407

Query: 328 CVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD 387
            VNRL  YN CL I G +T +   C+ +  LA+YA +FG  IGAYVGLTSV+LVDLLG++
Sbjct: 408 WVNRLLAYNVCLTIAGISTAMAMACWEFWGLALYATMFGFTIGAYVGLTSVVLVDLLGIE 467

Query: 388 RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG 436
           +LTNAFGLLLLFQGIASL+GPP AG+L+DS  SY+PAFF+AGG I +SG
Sbjct: 468 KLTNAFGLLLLFQGIASLIGPPFAGWLFDSLNSYAPAFFVAGGTISLSG 516

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170067840|ref|XP_001868638.1| monocarboxylate transporter [Culex quinquefasciatus] gi|167863901|gb|EDS27284.1| monocarboxylate transporter [Culex quinquefasciatus]

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 247/529 (46%), Positives = 316/529 (59%), Gaps = 76/529 (14%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DG+TYSFGI + EF   F+EG G T+WIASILVGVTLCSGP+SS+ VN+YGCR VTI G+
Sbjct: 55  DGMTYSFGIFYDEFLDYFKEGKGYTAWIASILVGVTLCSGPVSSSLVNRYGCRAVTIAGS 114

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           IL SACLA+SVFAK+V  L +TIG GTGLG GLIYLPAIVSVT YFERLRSLATGIAVCG
Sbjct: 115 ILASACLALSVFAKSVTMLFLTIGLGTGLGLGLIYLPAIVSVTMYFERLRSLATGIAVCG 174

Query: 121 SGLGTIIFAPIIDYTVREYGWK-----ITLLVLSVTVLSAVLFGILLRPLEEQPV----- 170
           SGLGT IFAP+ +  ++ +GW+     I+++VL   V  A+   ++  P   + V     
Sbjct: 175 SGLGTFIFAPLTEILIKRFGWQGALLVISVIVLGCIVFGAMFRPLVAEPAVPEAVPMTTV 234

Query: 171 ---------EEPVEDGALPHLRIIIFEVKPK----------------------------- 192
                       V+D     +R   F   PK                             
Sbjct: 235 VAPGSNGKLNGSVKDAEQGLVRSHSFGNSPKIALNSNGHSTSSNSMNRKTSQGDDSIRLA 294

Query: 193 -----------QRALTAVSTSIWQPSTAISTGPTEVISTQA-----------------QI 224
                      Q A+    +       A+ TG    IS++                  Q 
Sbjct: 295 LSQPLLHPTGDQPAMKRAESGTMYRKDALYTGSVHNISSRHPSHGSLALHEKGRYGSVQS 354

Query: 225 DSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVP 284
           +    +P  E       C+  S +T  T +EM++  +L+DPIFI+FT+SN  TSIGFN+P
Sbjct: 355 NGGKGLPVDEEGAVCCGCIPCSKETSDTFQEMMNFSILKDPIFIIFTVSNFLTSIGFNIP 414

Query: 285 YVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344
           YVY+   A+   + R +AS L+ ++G AN + R++LGY+SD+P VNRL +YN  L ICG 
Sbjct: 415 YVYLAAQAKVLDIDREHASYLLGVIGIANTIGRIVLGYLSDKPWVNRLLVYNLSLTICGL 474

Query: 345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIAS 404
           AT     C ++  LA Y+ +FG  IGAYVGLTSVILVDLLGL++LTNAFGLLLLFQGIAS
Sbjct: 475 ATAFSVLCLDFYSLATYSAIFGFTIGAYVGLTSVILVDLLGLEKLTNAFGLLLLFQGIAS 534

Query: 405 LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRK 453
            +GPP+AG+LYD T SY+P F LAG  I +SG MLF IP LQ YL ++ 
Sbjct: 535 FLGPPLAGWLYDITYSYNPGFILAGSTIAISGAMLFAIPPLQRYLARKH 583

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391342734|ref|XP_003745670.1| PREDICTED: monocarboxylate transporter 14-like [Metaseiulus occidentalis]

 Score =  365 bits (936), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 215/515 (41%), Positives = 308/515 (59%), Gaps = 72/515 (13%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DGVTY+FGI +I+F + F+E  G T+W+ASILV  T   GPI+SA  N YGCR VTI G+
Sbjct: 82  DGVTYTFGIFYIKFVEYFEESKGKTAWVASILVSTTFLCGPIASALTNLYGCRVVTIAGS 141

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           +L ++ + +S++A NV  L  +IG  TG+G GL+YLPAIVSV+ YF+R R+ ATGIAVCG
Sbjct: 142 LLAASGMFISIWAPNVTFLFFSIGILTGMGLGLMYLPAIVSVSMYFDRKRAFATGIAVCG 201

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEE-----PVE 175
           SG GT + AP+I+  V  YGW+  L++ S  +L+ V+FG L+RP E   V E      +E
Sbjct: 202 SGFGTFVLAPVIEALVDFYGWQGALMITSGMLLNCVVFGALMRPPEYIAVVEVDTTVDLE 261

Query: 176 DGALPH--LRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVP-- 231
            G + +   R     +  ++ A   VS ++ +PS  I +     +    ++DSK  +   
Sbjct: 262 FGDVDNNTARFPNENISKEREAELVVSENLLRPSNTIIS-----LQNHHKLDSKEKLHHR 316

Query: 232 ---------------------------ESESTEDKTTCLNLS------------------ 246
                                      E E+   K +  +L                   
Sbjct: 317 SVCHLSVNSEPELVLIRTPSIDRNLYLEREALNSKQSYASLRKRLSYTSQPSISVHSVQQ 376

Query: 247 -DDTK----------QTLREMLDMELL-RDPIFILFTISNIFTSIGFNVPYVYIVKLAE- 293
            +DT+          +T+ + +D+ LL + PIFILF +SN FTSIGFNVPYVYI  +A  
Sbjct: 377 REDTRGAREKFSAFMKTITDSIDIALLLKSPIFILFALSNFFTSIGFNVPYVYIADIARR 436

Query: 294 QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY 353
           Q  V  S AS L+S++G +N  SRV+LGY+SD+ CVNR+ +YN C+A CG AT +  FC 
Sbjct: 437 QLNVDDSKASLLLSLIGLSNTASRVLLGYLSDKRCVNRILLYNVCIATCGVATALSIFCT 496

Query: 354 NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF 413
           +YV+L++Y  +FGA  GA++ LTSVILVDL+GL++L NAFGL+LLF+GIA L+GPP+ G+
Sbjct: 497 DYVQLSVYCIIFGATSGAFISLTSVILVDLMGLEKLNNAFGLVLLFEGIACLIGPPLTGW 556

Query: 414 LYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSY 448
           ++D T SY+  F  +G  I   G+ L +IP ++ Y
Sbjct: 557 IFDWTGSYNWGFIFSGVVIATGGITLCLIPCVRKY 591

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405969993|gb|EKC34933.1| Monocarboxylate transporter 9 [Crassostrea gigas]

 Score =  363 bits (933), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 219/536 (40%), Positives = 304/536 (56%), Gaps = 81/536 (15%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DG+ YSFG+ ++EF   F+ G G T+W+ S++ GVTL  GP++SA  N+YGCR VTI GA
Sbjct: 41  DGIVYSFGVFYMEFLTYFKGGKGETAWVGSLVPGVTLLVGPVASALTNRYGCRAVTIAGA 100

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           I+ +    +S+FA N+  L  + G  +GLGFGL+YLPAIVSV+ YF++ RS ATGIAVCG
Sbjct: 101 IVAAIGFILSLFAPNIYYLFFSFGVLSGLGFGLMYLPAIVSVSHYFDKKRSFATGIAVCG 160

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL--------------- 165
           SG+GT IFAP+    V EY WK  +L+ +  +L+ +L G L RPL               
Sbjct: 161 SGIGTFIFAPVSKLLVDEYTWKGAVLIEAGIILNCILCGALFRPLVVKHERSDTEYDAKK 220

Query: 166 ------------------EEQPVEEPVEDG-----ALPHLRI----------IIFEVKPK 192
                              +Q + +  + G     A+P+  I          I+F  +  
Sbjct: 221 SEKSEKEKLMKSTESNGVHQQDLPDIQKTGTKDTLAIPNKHIQSLKVENGTDILFRSEGA 280

Query: 193 QRALTAVSTSIWQPSTAISTGPTEVISTQAQI------------DSKATVPESESTED-- 238
              +TA S S   PS       T   S QA +             S   +P+  S  +  
Sbjct: 281 INNITANSLS-QSPSKQSFHCQTSTRSHQAPVTGPMYRKDIFYSGSLINIPQYRSNPNLY 339

Query: 239 --KTTCLN--LSDDTKQTLREMLDME-LLRDPI-------------FILFTISNIFTSIG 280
               T L   + DD    L   L +   +RD I             F+LFTISNI TSIG
Sbjct: 340 VASITSLPDVVPDDQDWCLFRFLGLSPEMRDAIRQMLDFSLLKDVIFLLFTISNICTSIG 399

Query: 281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA 340
           FN+PY+Y+   A + G+ +++A++LIS++G AN + RV+ G+++D+P VNRL +YN  L 
Sbjct: 400 FNMPYIYLPDRAHEYGINKTDATNLISVIGIANTIGRVVFGWMADKPWVNRLMLYNTSLF 459

Query: 341 ICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ 400
           ICG AT +     +Y  L  YA VFGA IG YVGLTSV+LVDLLGL +LTNAFGLLL+FQ
Sbjct: 460 ICGLATALSPLNNSYPFLVCYAAVFGAFIGVYVGLTSVVLVDLLGLAKLTNAFGLLLMFQ 519

Query: 401 GIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKK 456
           G+A+ +GPPIAG+LYD T SY  +F++AG  + +SG ML+ +P +Q  L +R  K 
Sbjct: 520 GLATFIGPPIAGWLYDGTGSYDISFYVAGTMVAISGAMLYFLPLVQKCLGRRPPKD 575

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|443697234|gb|ELT97769.1| hypothetical protein CAPTEDRAFT_62745, partial [Capitella teleta]

 Score =  356 bits (914), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 213/497 (42%), Positives = 292/497 (58%), Gaps = 63/497 (12%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           DGV YSFG+    F + F      T+W+ S+++GVT  SGPI S   N++GCR  T  G+
Sbjct: 26  DGVAYSFGVFLPTFLEYFDSPRSETAWLGSLMIGVTWGSGPIGSIMTNRFGCRATTCIGS 85

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           IL +A   +S+FA N+  +  + G   GLG GLIYLPAIV VT YFE+ RS ATG+AVCG
Sbjct: 86  ILSAAAFILSIFAPNIWFMYFSFGILAGLGLGLIYLPAIVIVTFYFEKKRSFATGLAVCG 145

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALP 180
           SG+GT IFAP+  + V ++GWK  +L+ +  +L+  +FG+L RPL   P  E  E  A  
Sbjct: 146 SGIGTFIFAPLSQFLVDQFGWKGAVLIEAGILLNCCVFGLLFRPLALDPAVESDEKPA-- 203

Query: 181 HLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEV----------------------- 217
                  EV+   + L+A++ S  +  T++ + P  V                       
Sbjct: 204 -------EVELVNKNLSALAASE-KTMTSVPSLPQAVKLDAEPVRPFTSELMLHRSHESH 255

Query: 218 ---ISTQAQID----------------------SKATVPESESTEDKT--TCLNLSDDTK 250
              +S  A+ D                      S A++P SES++      C +++   +
Sbjct: 256 KKEVSPFARKDAFYSGSLRNIPLYRSNPGMYTQSMASLPVSESSKGSQGGKCSSVARCLR 315

Query: 251 QTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVG 310
              R +    LL+DP+F+LFT+SN  TS+GF VPY+Y+  LA Q G+ RS  + LISIVG
Sbjct: 316 HQSRHL---ALLKDPVFLLFTVSNFLTSLGFCVPYIYLPDLAHQLGIGRSEGAFLISIVG 372

Query: 311 AANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIG 370
            AN V RV+ G++SD  CVNRL +YN  L +CG  T +C+FC  Y  LA YA  FG  IG
Sbjct: 373 IANTVGRVVFGWMSDLKCVNRLVLYNTVLTLCGICTALCSFCVVYPMLAAYAAAFGMFIG 432

Query: 371 AYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGG 430
            YVGLTSV+LVDLLGL++LTNAFGLLLLFQG A++VGPPIAG +YD   +Y  AF+L G 
Sbjct: 433 VYVGLTSVVLVDLLGLEKLTNAFGLLLLFQGAAAVVGPPIAGKMYDLRGNYDDAFYLMGA 492

Query: 431 AIFVSGVMLFVIPSLQS 447
            + +SG+MLF +P +Q 
Sbjct: 493 LVALSGLMLFALPFIQK 509

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	461
FB|FBgn0023549	626	Mct1 "Monocarboxylate transpor	0.498	0.367	0.543	2.4e-108
FB|FBgn0035173	816	CG13907 [Drosophila melanogast	0.488	0.275	0.417	2.2e-82
WB|WBGene00015676	594	C10E2.6 [Caenorhabditis elegan	0.514	0.398	0.42	6.7e-73
WB|WBGene00020168	591	T02G5.12 [Caenorhabditis elega	0.409	0.319	0.466	7.7e-70
FB|FBgn0033913	678	CG8468 [Drosophila melanogaste	0.453	0.308	0.361	5.4e-56
WB|WBGene00003986	777	pes-22 [Caenorhabditis elegans	0.446	0.265	0.388	3.1e-55
FB|FBgn0033095	894	CG3409 [Drosophila melanogaste	0.425	0.219	0.350	1e-52
WB|WBGene00015273	571	C01B4.9 [Caenorhabditis elegan	0.501	0.404	0.319	2.7e-50
WB|WBGene00021227	544	Y19D10A.12 [Caenorhabditis ele	0.427	0.362	0.336	3e-50
WB|WBGene00010834	596	M03B6.2 [Caenorhabditis elegan	0.496	0.384	0.308	6.5e-50

FB|FBgn0023549 Mct1 "Monocarboxylate transporter 1" [Drosophila melanogaster (taxid:7227)]

 Score = 653 (234.9 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
 Identities = 125/230 (54%), Positives = 164/230 (71%)

Query:   217 VISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIF 276
             VI     +     V +S+       C+  S +T+ T  EM++  LL+D +F++F++SN  
Sbjct:   378 VIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRDTFAEMMNFSLLKDMVFVIFSVSNFC 437

Query:   277 TSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYN 336
             TSIGFNVPY+Y+V  AE   +T+++AS LIS +G AN V R+ILGYISD+P VNRL +YN
Sbjct:   438 TSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVGRIILGYISDKPWVNRLLVYN 497

Query:   337 GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLL 396
              CL  CG +T +   C+++  LA Y  VFG  IGAYVGLTSVILVDLLGLD+LTNAFGLL
Sbjct:   498 VCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILVDLLGLDKLTNAFGLL 557

Query:   397 LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446
             LLFQGIAS +GPPI G++YD T SY+PAF +AG  I +SG+++F IP LQ
Sbjct:   558 LLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPLQ 607

GO:0008028 "monocarboxylic acid transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0035173 CG13907 [Drosophila melanogaster (taxid:7227)]

 Score = 494 (179.0 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
 Identities = 94/225 (41%), Positives = 139/225 (61%)

Query:   222 AQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGF 281
             A++D  A   +     D   CL + D  K  +  MLD+ LL+DP+F+L  +SNIF   G 
Sbjct:   527 AKLDPLAEAEKHREEYDLCPCLGIPDSVKSVVNTMLDVSLLKDPVFMLIGVSNIFGMAGL 586

Query:   282 NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAI 341
              VP+VY+V  A++  + +++A+ L+SI+G  N V RV  G+++D P VN L + N CL +
Sbjct:   587 YVPFVYLVDAAKEHDIPKNDAAMLLSIIGITNTVGRVFCGWVADLPQVNSLLLNNCCLLV 646

Query:   342 CGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG 401
                A  +   CY+Y      +  FG  I  Y+ LTS+ILVDLLGLD+LTNAFGLL+LF+G
Sbjct:   647 STIAVTLTPLCYSYAAYITMSIFFGLAISGYISLTSIILVDLLGLDKLTNAFGLLILFRG 706

Query:   402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446
              A+L+G P+AG +YD T +Y   F++AG    +S +  F+ P L+
Sbjct:   707 FAALIGTPLAGAIYDMTHTYDLPFYMAGALFGISTITSFLAPCLK 751

GO:0015355 "secondary active monocarboxylate transmembrane transporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

WB|WBGene00015676 C10E2.6 [Caenorhabditis elegans (taxid:6239)]

 Score = 459 (166.6 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
 Identities = 105/250 (42%), Positives = 150/250 (60%)

Query:   209 AISTGPTEVISTQAQIDSKAT-VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIF 267
             A STG  + +   ++ DSKA  + E  +  D T  +   +  K T+  ML +ELL +P F
Sbjct:   334 AHSTGRLDDVREGSEEDSKAMDISEKTNGTDNTDNVEGKNMFK-TISNMLSLELLLEPTF 392

Query:   268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDR- 326
             +LF ISN+ TS+GFN P  ++   A + G+     S ++S  G +N V R+I G ++D  
Sbjct:   393 LLFAISNLLTSVGFNSPLYFLPLHATKIGLEPIQGSKVLSAFGVSNTVGRIIFGVVADHK 452

Query:   327 -PCV---------NRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLT 376
              P           NRL++YN  L ICG  TV C     ++ LA Y+ +FG  I +Y+ LT
Sbjct:   453 LPLPGGIGNDTARNRLWMYNISLTICGLLTVFCYQFNGFIPLATYSALFGFSIASYICLT 512

Query:   377 SVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG 436
             SVILVDLLGLD+LTNAFGLLLL+QG+ ++ GPP++G+L D T +Y+ +F   G  +  SG
Sbjct:   513 SVILVDLLGLDKLTNAFGLLLLWQGVGTVFGPPVSGYLADMTGNYTLSFVFCGVNLLASG 572

Query:   437 VMLFVIPSLQ 446
             +MLF IP  Q
Sbjct:   573 LMLFGIPFFQ 582

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

WB|WBGene00020168 T02G5.12 [Caenorhabditis elegans (taxid:6239)]

 Score = 436 (158.5 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
 Identities = 97/208 (46%), Positives = 138/208 (66%)

Query:   251 QTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNAS-SLISIV 309
             +T+  M   +LL DP F+LF ISN+ TS+GFN P +Y + L     ++ +N S +++S+ 
Sbjct:   370 KTINNMFSFQLLLDPAFLLFAISNLLTSVGFNSP-LYFLPLHVTNILSDNNVSGNILSVY 428

Query:   310 GAANMVSRVILGYISDR----PCV-------NRLYIYNGCLAICGAATVICAFCYN---Y 355
             G AN + R+I G ++D+    P         NRL++YN  L ICG   ++ AFCY    Y
Sbjct:   429 GTANTIGRLIFGVVADQKLPLPAGLGDDTARNRLWMYNISLTICG---IVTAFCYKFDGY 485

Query:   356 VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY 415
             + L IYA +FG  I +YV LTSVILVDLLGLD+LTNAFGLLLL+QG+ +++GP ++G+L 
Sbjct:   486 ILLDIYAVLFGFTIASYVCLTSVILVDLLGLDKLTNAFGLLLLWQGVGTVIGPLVSGYLA 545

Query:   416 DSTLSYSPAFFLAGGAIFVSGVMLFVIP 443
             D T +Y+ +F   G  + VSG+MLFVIP
Sbjct:   546 DLTGNYTLSFVFCGINLMVSGLMLFVIP 573

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

FB|FBgn0033913 CG8468 [Drosophila melanogaster (taxid:7227)]

 Score = 355 (130.0 bits), Expect = 5.4e-56, Sum P(2) = 5.4e-56
 Identities = 76/210 (36%), Positives = 116/210 (55%)

Query:   232 ESESTEDKTT-CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVK 290
             + +  ED+   C    +  ++TL  MLD  LL+ P F+    S   T +GF VP+ ++V 
Sbjct:   447 KQDMLEDRQKGCRICPEAVRRTLSTMLDTTLLKSPAFMCLAFSGFLTMMGFFVPFTFLVD 506

Query:   291 LAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICA 350
              A+  G+    A  ++S +G  N  +R++ G +S  P V  L++ N  L   G AT+   
Sbjct:   507 RAKAAGMDEQAAYGVLSGIGVVNTFARIVCGSLSSFPAVKPLWLNNFALTAGGIATICSG 566

Query:   351 FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPI 410
                N      +A  FG  I  +  L S+I V+L+GL++LTNA+G L+LFQG+A+  G PI
Sbjct:   567 IVINTATQWTFALFFGICIACFSALRSLIAVELIGLEKLTNAYGFLMLFQGLAATFGSPI 626

Query:   411 AGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440
             AG LY  T SY+ AF+ AGG I +S  + +
Sbjct:   627 AGGLYVMTGSYNAAFYFAGGLILLSAFLCY 656

GO:0015355 "secondary active monocarboxylate transmembrane transporter activity" evidence=NAS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00003986 pes-22 [Caenorhabditis elegans (taxid:6239)]

 Score = 385 (140.6 bits), Expect = 3.1e-55, Sum P(2) = 3.1e-55
 Identities = 80/206 (38%), Positives = 122/206 (59%)

Query:   238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGV 297
             D   C  L    +  L EM+D+ LL++   ++  ISN+   +GF +P +++  L+E   +
Sbjct:   484 DDGCCKVLPLPMRNALSEMIDLNLLKNKTMMILCISNLLGMMGFYIPIMFLKDLSESMKL 543

Query:   298 TRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVE 357
               S A  L+ I G  N + RV  G+++D+  ++ L I N  L + G  T+ C    +   
Sbjct:   544 DMSLAMFLVPIFGVFNTIGRVFFGWLTDQKILSALTINNLSLIVSGLLTLACPLLTSIAG 603

Query:   358 LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS 417
                YA VFG +I AY+ LTS++L DL+GL+ LTN+FGLL++ +GIASLVGPP AG +YD 
Sbjct:   604 QYFYAIVFGFIISAYICLTSIVLADLMGLENLTNSFGLLVVARGIASLVGPPFAGIVYDI 663

Query:   418 TLSYSPAFFLAGGAIFVSGVMLFVIP 443
             T SY  AF+  G  + V+G++   IP
Sbjct:   664 TGSYDTAFYFGGLVLLVAGLISATIP 689

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

FB|FBgn0033095 CG3409 [Drosophila melanogaster (taxid:7227)]

 Score = 310 (114.2 bits), Expect = 1.0e-52, Sum P(2) = 1.0e-52
 Identities = 69/197 (35%), Positives = 105/197 (53%)

Query:   247 DDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLI 306
             D+   T++ + D  L  D  F LF +S +F  I F +PY+Y+    +Q     S ++ LI
Sbjct:   673 DNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYLYLPDYMKQYKYDVSQSAELI 732

Query:   307 SIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY-NYVELAIYAGVF 365
             S VG A  V  + LGY+ D   +N    Y+ C+ +CGA+         NY+ L +   +F
Sbjct:   733 SDVGIAQTVGMIGLGYLGDLSWMNINICYSLCMLVCGASVFFMPLLITNYMGLMVMCVIF 792

Query:   366 GAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAF 425
             G    +    T  ILV ++ LD  T A+GL+LL QG+  + GPPIAG +Y+ T  +   F
Sbjct:   793 GFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDDTF 852

Query:   426 FLAGGAIFVSGVMLFVI 442
             + AG  I +SGV  ++I
Sbjct:   853 YYAGIFIALSGVCSYLI 869

GO:0008028 "monocarboxylic acid transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00015273 C01B4.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 319 (117.4 bits), Expect = 2.7e-50, Sum P(2) = 2.7e-50
 Identities = 77/241 (31%), Positives = 131/241 (54%)

Query:   216 EVISTQAQIDSKATVPES----ESTEDKTT--CLNLSDDTK--QTLREMLDMELLRDPIF 267
             E I  + ++D KA          +TE  T    +  S  TK  ++L  +LD +LL  P F
Sbjct:   309 ETIKNRKKLDRKAAESAEAHVVHATEHHTVHHVVKKSKFTKFKESLCSVLDKDLLFSPSF 368

Query:   268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNAS-SL-ISIVGAANMVSRVILGYISD 325
             +   +S  FT + F VP+VY+    +Q+    ++A  SL ++++GA N++ R+  G ++D
Sbjct:   369 MTLAVSGTFTVLSFLVPFVYLALAMKQKNPDFTDAELSLPVTLIGAFNIMFRIGCGMVAD 428

Query:   326 RPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG 385
              P ++ L + N    I G + +   FC       ++   F A +  +  L SVI V+L+G
Sbjct:   429 HPKMSALQVSNVATIIAGTSMLFVPFCTELWHYVVFCIPFSAGVACFAALRSVICVELIG 488

Query:   386 LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL 445
             +++L+NAFG+L++F GI ++VG PIA  + D T +Y  +F++ G     SGVM   +P L
Sbjct:   489 VEKLSNAFGILMVFMGIGAVVGGPIAAQIKDITGNYDISFYVMGIIFAFSGVMTIRLPEL 548

Query:   446 Q 446
             +
Sbjct:   549 K 549

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

WB|WBGene00021227 Y19D10A.12 [Caenorhabditis elegans (taxid:6239)]

 Score = 317 (116.6 bits), Expect = 3.0e-50, Sum P(2) = 3.0e-50
 Identities = 67/199 (33%), Positives = 116/199 (58%)

Query:   250 KQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNAS-SL-IS 307
             K++L  +LD +LL  P F+   +S  FT + F VP+VY+    +Q+    ++A  SL ++
Sbjct:   324 KESLCSVLDKDLLFSPSFMTLAVSGTFTVLSFLVPFVYLALAMKQKNPDFTDAELSLPVT 383

Query:   308 IVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGA 367
             ++GA N++ R+  G ++D P ++ L + N    I G + +   FC       ++   F A
Sbjct:   384 LIGAFNIMFRIGCGMVADHPKMSALQVSNVATIIAGTSMLFVPFCTELWHYVVFCIPFSA 443

Query:   368 MIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL 427
              +  +  L SVI V+L+G+++L+NAFG+L++F GI ++VG PIA  + D T +Y  +F++
Sbjct:   444 GVACFAALRSVICVELIGVEKLSNAFGILMVFMGIGAVVGGPIAAQIKDITGNYDISFYV 503

Query:   428 AGGAIFVSGVMLFVIPSLQ 446
              G     SGVM   +P L+
Sbjct:   504 MGIIFAFSGVMTIRLPELK 522

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

WB|WBGene00010834 M03B6.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 329 (120.9 bits), Expect = 6.5e-50, Sum P(2) = 6.5e-50
 Identities = 71/230 (30%), Positives = 126/230 (54%)

Query:   218 ISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFT 277
             + T  Q  SKA +   ++ +      +   + KQ L++++D ELL  P F+L   S   T
Sbjct:   338 VETPQQYLSKADLNAGDNGDVAIANESKIQEIKQALKQLVDKELLFSPSFLLLAFSGTLT 397

Query:   278 SIGFNVPYVYIVK-LAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYN 336
                F VP++Y+   L +  G+T +  S  +S++G  N+V+R+  G ++DRP V+ L + N
Sbjct:   398 LCCFYVPFIYLGNHLDKIEGLTTAEKSFTVSLIGVLNIVARIGCGILADRPEVSALAVNN 457

Query:   337 GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLL 396
               L   G AT+       Y +   +   F   +  +  L S+I+V+L+GL++L+NAFG+L
Sbjct:   458 FALIAAGLATMTVPLYTAYWQFLAFCVPFSIGVACFAALRSIIVVELIGLEKLSNAFGIL 517

Query:   397 LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446
             L F G+ ++VG P+A  + D T ++  +F++ G  + +SG M   +  L+
Sbjct:   518 LTFMGVGAVVGSPLAAAMKDYTGNFDTSFYVMGALMTISGAMCIPLGGLR 567

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7RTX9	MOT14_HUMAN	No assigned EC number	0.2830	0.9392	0.8490	yes	N/A
Q8K1C7	MOT14_MOUSE	No assigned EC number	0.2827	0.9262	0.8339	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	461
TIGR00892	455	TIGR00892, 2A0113, monocarboxylate transporter 1	2e-64
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	2e-13
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	3e-13
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	3e-11
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	1e-10
TIGR00890	377	TIGR00890, 2A0111, oxalate/formate antiporter fami	3e-09
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	1e-08
TIGR00880	141	TIGR00880, 2_A_01_02, Multidrug resistance protein	1e-07
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	7e-07
TIGR00895	398	TIGR00895, 2A0115, benzoate transport	6e-06
TIGR00900	365	TIGR00900, 2A0121, H+ Antiporter protein	8e-06
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	2e-05
COG2814	394	COG2814, AraJ, Arabinose efflux permease [Carbohyd	2e-05
TIGR04259	405	TIGR04259, oxa_formateAnti, oxalate/formate antipo	2e-05
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	3e-04
PRK10091	382	PRK10091, PRK10091, MFS transport protein AraJ; Pr	0.003
PRK12307	426	PRK12307, PRK12307, putative sialic acid transport	0.004
pfam03137	582	pfam03137, OATP, Organic Anion Transporter Polypep	0.004
TIGR00891	405	TIGR00891, 2A0112, putative sialic acid transporte	0.004

>gnl|CDD|233173 TIGR00892, 2A0113, monocarboxylate transporter 1

 Score =  214 bits (547), Expect = 2e-64
 Identities = 129/465 (27%), Positives = 217/465 (46%), Gaps = 61/465 (13%)

Query: 2   GVTYSF----GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTI 57
           G +Y+F     + F E  ++FQ     T+WI+SI++ V    GPISS  VN++GCR V I
Sbjct: 29  GFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVI 88

Query: 58  CGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIA 117
            G +L S  + ++ F+ NVI L +T GF TGLG    + P++  +  YF R R LA G+A
Sbjct: 89  AGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLA 148

Query: 118 VCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDG 177
           + GS +     AP+  Y    +GW+ + L+L   +L   + G L+RP+         +  
Sbjct: 149 MAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSK-- 206

Query: 178 ALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE 237
                                                           SK  +P   ST+
Sbjct: 207 ------------------------------------------------SKEGLPPDGSTK 218

Query: 238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGV 297
            K +  +    T + +   LD  L     F+++   N+   +GF  P +++V  A+ +GV
Sbjct: 219 -KLSKKS----TAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGV 273

Query: 298 TRSNASSLISIVGAANMVSRVILGYISDRPCV--NRLYIYNGCLAICGAATVICAFCYNY 355
               A+ L+SI+G  ++ +R   G I+    +  +  Y+++  L   G   ++CA   +Y
Sbjct: 274 DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDY 333

Query: 356 VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY 415
             L IY   FG   G+   L   +L+DL+G  R ++A GL+ + +  A L+GPP+AG L 
Sbjct: 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLV 393

Query: 416 DSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKKLSSE 460
           D+T +Y   F+ +G  +  +G+ L +   +   LL +++K     
Sbjct: 394 DATKNYKYIFYASGSIVVSAGLFLAIGNYINYRLLAKEQKAALER 438

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 455

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 2/184 (1%)

Query: 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDR 326
            +L  +    + +   +    +  LAE  G++ S A  ++S       +  ++ GY+SDR
Sbjct: 1   LLLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR 60

Query: 327 PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGL 386
               R  +    L +    +++ AF  +   L +   + G   GA     + ++ +    
Sbjct: 61  --FGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP 118

Query: 387 DRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446
                A GL     G+ +L+GP + G L +S         LA   + ++ ++LF++  L 
Sbjct: 119 KERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLRLLL 178

Query: 447 SYLL 450
              L
Sbjct: 179 LLAL 182

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 70.4 bits (173), Expect = 3e-13
 Identities = 35/180 (19%), Positives = 74/180 (41%), Gaps = 3/180 (1%)

Query: 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVILGYI 323
            + +L  ++    S G+     Y+    ++  G++ + A  L+S+ G   ++  ++ G +
Sbjct: 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLL 234

Query: 324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDL 383
           SDR    R  +    L +     ++ A   +   L +   + G  +G        +  +L
Sbjct: 235 SDR-LGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASEL 293

Query: 384 LGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443
              +    A GL   F  +   +GP +AG L D T  Y   F +      ++ ++L ++P
Sbjct: 294 APPEARGTASGLFNTFGSLGGALGPLLAGLLLD-TGGYGGVFLILAALALLAALLLLLLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 64.6 bits (158), Expect = 3e-11
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 2/163 (1%)

Query: 4   TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILG 63
                       +           I S           ++    +++G R V + G +L 
Sbjct: 15  RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLF 74

Query: 64  SACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSG 122
           +    +  FA ++  L +   F  GLG G +Y  A   +  +F  + R  A G+   G G
Sbjct: 75  ALGSLLLAFASSLWLLLVG-RFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFG 133

Query: 123 LGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165
           LG ++   +        GW+   L+L++  L   L  + L  L
Sbjct: 134 LGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLRL 176

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 62.8 bits (153), Expect = 1e-10
 Identities = 31/174 (17%), Positives = 67/174 (38%), Gaps = 3/174 (1%)

Query: 269 LFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPC 328
           LF  + +       +     + LAE  G++ +    L++       +++ + G +SDR  
Sbjct: 1   LFLAAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDR-- 58

Query: 329 VNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR 388
             R  +    L +     ++  F  +   L +   + G   GA     + ++ D    + 
Sbjct: 59  FGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEE 118

Query: 389 LTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442
              A GLL    G+ + +GP + G L      +  AF +      ++ V+  ++
Sbjct: 119 RGRALGLLSAGFGLGAALGPLLGGLLASL-FGWRAAFLILAILALLAAVLAALL 171

Length = 346

>gnl|CDD|233171 TIGR00890, 2A0111, oxalate/formate antiporter family transporter

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 3/162 (1%)

Query: 2   GVTYSFGILFIEFTKVFQEG-DGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           G  Y++ +L     + F  G   V  W   +L+G+ + S P+     +K+G R V + G 
Sbjct: 17  GYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAM-SMPVGGLLADKFGPRAVAMLGG 75

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG 120
           IL          A ++  L +T G     G G+ Y  A+ +   +F   R LA+GI + G
Sbjct: 76  ILYGLGFTFYAIADSLAALYLTYGLA-SAGVGIAYGIALNTAVKWFPDKRGLASGIIIGG 134

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILL 162
            GLG+ I +P+I   +   G     + + +  L  ++ G  L
Sbjct: 135 YGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFL 176

This subfamily belongs to the major facilitator family. Members include the oxalate/formate antiporter of Oxalobacter formigenes, where one substrate is decarboxylated in the cytosol into the other to consume a proton and drive an ion gradient [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 377

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 2/203 (0%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
           G +     L +   +           + +        + P++    +++G R V + G +
Sbjct: 11  GRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLL 70

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCG 120
           L +  L + +FA ++  L + +    GLG G ++  A   +  +F    R  A G+   G
Sbjct: 71  LFALGLLLLLFASSLWLLLV-LRVLQGLGGGALFPAAAALIADWFPPEERGRALGLLSAG 129

Query: 121 SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALP 180
            GLG  +   +       +GW+   L+L++  L A +   LL P      + P      P
Sbjct: 130 FGLGAALGPLLGGLLASLFGWRAAFLILAILALLAAVLAALLLPRPPPESKRPKPAEEAP 189

Query: 181 HLRIIIFEVKPKQRALTAVSTSI 203
              +  +++  +   L  +   +
Sbjct: 190 APLVPAWKLLLRDPVLWLLLALL 212

Length = 346

>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%)

Query: 305 LISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGV 364
           L++      ++   + G ++DR    R  +    L I   +T + A   N   L I A  
Sbjct: 3   LLAGYALGQLIYSPLSGLLTDR--FGRKPVLLVGLFIFVLSTAMFALSSNITVLII-ARF 59

Query: 365 FGAMIGAYVGLTSVILV-DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSP 423
                 A+  +    L+ D+   +    A GL+     +  L+GPP+ G L       +P
Sbjct: 60  LQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAP 119

Query: 424 AFFLAGGAIFVSGVMLFVIP 443
             FLA  A+    ++ F++P
Sbjct: 120 FLFLAILALAAFILLAFLLP 139

Length = 141

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 50.5 bits (121), Expect = 7e-07
 Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 2/150 (1%)

Query: 260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVI 319
            LLRDP+  L     +     F     Y+    E  G++   A  L+ + G    + R++
Sbjct: 198 LLLRDPVLWLLLAL-LLFGFAFFALLTYLPLYQEVLGLSALLAGLLLGLAGLLGAIGRLL 256

Query: 320 LGYISDR-PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSV 378
           LG +SDR     RL +    L +      + +   + + L +   + G   G      + 
Sbjct: 257 LGRLSDRLGRRRRLLLALLLLILAALGLALLSLTESSLWLLVALLLLGFGAGLVFPALNA 316

Query: 379 ILVDLLGLDRLTNAFGLLLLFQGIASLVGP 408
           ++ DL   +    A GL      +   +GP
Sbjct: 317 LVSDLAPKEERGTASGLYNTAGSLGGALGP 346

Length = 346

>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport

 Score = 47.7 bits (114), Expect = 6e-06
 Identities = 62/352 (17%), Positives = 123/352 (34%), Gaps = 51/352 (14%)

Query: 27  WIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86
           ++ S  +              ++ G R V +   +L S    +   A NV  L I + F 
Sbjct: 56  FLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLI-LRFL 114

Query: 87  TGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITL 145
            GLG G +       V+ Y  +R R  A G+  CG  +G  +   +  + +  +GW+   
Sbjct: 115 AGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLF 174

Query: 146 LVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQ 205
            V    +   +L  +L+R L E                 I F V  +   +  +  +   
Sbjct: 175 YV--GGIAPLLLLLLLMRFLPES----------------IDFLVSKRPETVRRIVNA--- 213

Query: 206 PSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDP 265
                       I+ Q Q ++++ +PE ++T+     +  +    +T R  +        
Sbjct: 214 ------------IAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITV-------- 253

Query: 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD 325
              L  +      +G      ++ KL  + G + S A++  ++     ++  +I G+++D
Sbjct: 254 ---LLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLAD 310

Query: 326 RPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAM--IGAYVGL 375
           R       +    L +     V+         L +  G        G   GL
Sbjct: 311 R---LGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGL 359

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398

>gnl|CDD|162098 TIGR00900, 2A0121, H+ Antiporter protein

 Score = 47.3 bits (113), Expect = 8e-06
 Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 12/153 (7%)

Query: 300 SNASSLISIVGAANMVSRVIL----GYISDRPCVNRLYIYNGC-LAICGAATVICAFCYN 354
           + ++S++S+   A M+  V+L    G ++DR   +R  +  G  L       V+      
Sbjct: 30  TGSASVLSLAALAGMLPYVVLSPIAGALADR--YDRKKVMIGADLIRAVLVAVLPFVALL 87

Query: 355 YVE----LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPI 410
                  + + AG+       +      +L DL+  ++LT A  L    + +  +VGP I
Sbjct: 88  GGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGI 147

Query: 411 AGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443
            G +Y +TL    A ++      +S +++  + 
Sbjct: 148 GGLMY-ATLGIKWAIWVDAVGFAISALLIVSVR 179

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 365

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 22/151 (14%), Positives = 49/151 (32%), Gaps = 1/151 (0%)

Query: 14  FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTIC-GAILGSACLAVSVF 72
             +V          + S+     +    +     ++ G R + +  G +L +  L +   
Sbjct: 202 LQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL 261

Query: 73  AKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPII 132
           A ++  L + +                ++        R  A+G+      LG  +   + 
Sbjct: 262 APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLA 321

Query: 133 DYTVREYGWKITLLVLSVTVLSAVLFGILLR 163
              +   G+    L+L+   L A L  +LL 
Sbjct: 322 GLLLDTGGYGGVFLILAALALLAALLLLLLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 27/153 (17%), Positives = 63/153 (41%), Gaps = 2/153 (1%)

Query: 291 LAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICA 350
           +A   GV+   A  LI+       +   +L  ++ R  + R  +  G LA+   + ++ A
Sbjct: 39  IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR--LERRRLLLGLLALFIVSNLLSA 96

Query: 351 FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPI 410
              ++  L +   + G   G +  + + +   L+   +   A  L+     +A+++G P+
Sbjct: 97  LAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPL 156

Query: 411 AGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443
             FL       +    +A  A+    ++  ++P
Sbjct: 157 GTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189

Length = 394

>gnl|CDD|234525 TIGR04259, oxa_formateAnti, oxalate/formate antiporter

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 3/165 (1%)

Query: 2   GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAI 61
            + Y + +           G        ++ V       PI   FV+KYG R V + G I
Sbjct: 17  NLQYGWTLFVNPIDATHGWGRAAIQVAFTLFVVTETWLVPIEGWFVDKYGPRIVVMFGGI 76

Query: 62  LGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGS 121
           +      ++ +A ++  L        G+G G +Y   + +   +F   R LA G+   G 
Sbjct: 77  MCGLGWVLNAYADSLPALYAAAVVA-GIGAGAVYGTCVGNALKWFPDKRGLAAGLTAAGF 135

Query: 122 GLGTIIFAPIIDYTVREYGWKITLLV--LSVTVLSAVLFGILLRP 164
           G G  +    I   ++  G++   +   L   ++  +L  +L  P
Sbjct: 136 GAGAALTVVPIAAMIKVSGYQAAFMYFGLGQGIVIVLLALLLRAP 180

This model represents a subgroup of the more broadly defined model TIGR00890, which in turn belongs to the Major Facilitator transporter family. Seed members for this family include the known oxalate/formate antiporter of Oxalobacter formigenes, as well as transporter subunits co-clustered with the two genes of a system that decarboxylates oxalate into formate. In many of these cassettes, two subunits are found rather than one, suggesting the antiporter is sometimes homodimeric, sometimes heterodimeric. Length = 405

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 41/231 (17%), Positives = 79/231 (34%), Gaps = 20/231 (8%)

Query: 225 DSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFIL-----FTISNIFTSI 279
            +K    E +                 T ++    ELL+D          F ++      
Sbjct: 175 KAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFF 234

Query: 280 GFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL 339
               P  Y+V+   +RG++   A  + S+ G    +  ++ G +SD        +     
Sbjct: 235 LTWFP-TYLVQ---ERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARK 290

Query: 340 --AICGAATVICAFCYNYVELAIYA------GVFGAMIGAYVGLTSVILVDLLGLDRLTN 391
              I G    +  F  NYV +   A      G FG   GA   +   ++ D    +    
Sbjct: 291 TAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGA---IGWALISDNAPGNIAGL 347

Query: 392 AFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442
             GL+     +  +VGP + G +  +T S++ A  +      +  +   ++
Sbjct: 348 TGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLLL 398

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|182234 PRK10091, PRK10091, MFS transport protein AraJ; Provisional

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 8/132 (6%)

Query: 306 ISIVGAANMVSRVILGYISDRPCVNRL-------YIYNGCLAICGAATVICAFCYNYVEL 358
           ISI  A +M+S   LG +   P +          +I    +A+C     +     +Y+ L
Sbjct: 35  ISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLML 94

Query: 359 AIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST 418
           AI   V G   GA+ G+ +++L  ++   ++T A   ++    +A+L+G P+  +L    
Sbjct: 95  AIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL-SQE 153

Query: 419 LSYSPAFFLAGG 430
            S+   F L   
Sbjct: 154 FSWRYTFLLIAV 165

Length = 382

>gnl|CDD|237051 PRK12307, PRK12307, putative sialic acid transporter; Provisional

 Score = 39.1 bits (91), Expect = 0.004
 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 6/136 (4%)

Query: 23  GVTSWIASILVGVTLCSGPISSAF----VNKYGCRNVTICGAILGSACLAVSVFAKNVIT 78
           G+T    + L        P   A      +K+G + + +   +  S    +S  A  VI 
Sbjct: 49  GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIM 108

Query: 79  LCITIGFGTGLGFGLIYLPA-IVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVR 137
           L ++  F  G+G    Y  A   +V  + + L+S A+   V G G+G II A  +     
Sbjct: 109 LTLS-RFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167

Query: 138 EYGWKITLLVLSVTVL 153
            YGW+    V  + VL
Sbjct: 168 AYGWRAAFFVGLLPVL 183

Length = 426

>gnl|CDD|217384 pfam03137, OATP, Organic Anion Transporter Polypeptide (OATP) family

 Score = 39.2 bits (92), Expect = 0.004
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 227 KATVPESESTEDKTTCLNLSDDTKQTLREMLDM-----ELLRDPIFILFTISNIFTSIGF 281
             + P+++    K          K     + D       LL +P F+L  ++ +F S   
Sbjct: 262 DLSRPKAKDETRKQA--EEPKSGKSAPDFLKDFPKTLKRLLTNPTFMLVVLAQVFESSVI 319

Query: 282 NVPYVYIVKLAE-QRGVTRSNASSLISIVG-AANMVSRVILGYISDRPCVNRLYI-YNGC 338
                ++ K  E Q G++ S A+ LI +V   A  V  ++ G I     + +  +   G 
Sbjct: 320 AGYSTFLPKYLETQYGLSASYANFLIGVVNLPAAAVGILLGGLI-----IKKFKLTARGM 374

Query: 339 LAICGAATVICAFCY 353
                   ++    Y
Sbjct: 375 AKFAIFVILVSLAFY 389

This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters. Length = 582

>gnl|CDD|233172 TIGR00891, 2A0112, putative sialic acid transporter

 Score = 39.1 bits (91), Expect = 0.004
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 2/111 (1%)

Query: 286 VYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA 345
           + + ++A + G+T  +A+SLIS    +     ++ G   DR    R       + +  A 
Sbjct: 33  LVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR--YGRRLPMVTSIVLFSAG 90

Query: 346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLL 396
           T+ C F   Y+ + I   V G  +G   G ++  +++         A GLL
Sbjct: 91  TLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLL 141

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 405

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	461
KOG2504|consensus	509		100.0
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
TIGR00892	455	2A0113 monocarboxylate transporter 1.	100.0
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	100.0
PRK09705	393	cynX putative cyanate transporter; Provisional	100.0
PRK11663	434	regulatory protein UhpC; Provisional	100.0
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	100.0
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	100.0
PRK03545	390	putative arabinose transporter; Provisional	100.0
TIGR00893	399	2A0114 d-galactonate transporter.	100.0
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	100.0
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	100.0
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	100.0
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	100.0
PRK03699	394	putative transporter; Provisional	100.0
PRK10213	394	nepI ribonucleoside transporter; Reviewed	100.0
PRK10091	382	MFS transport protein AraJ; Provisional	100.0
PLN00028	476	nitrate transmembrane transporter; Provisional	100.0
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	100.0
PRK10642	490	proline/glycine betaine transporter; Provisional	100.0
PRK10489	417	enterobactin exporter EntS; Provisional	100.0
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	100.0
PRK12307	426	putative sialic acid transporter; Provisional	100.0
TIGR00896	355	CynX cyanate transporter. This family of proteins	100.0
TIGR00897	402	2A0118 polyol permease family. This family of prot	100.0
TIGR00891	405	2A0112 putative sialic acid transporter.	100.0
PRK11646	400	multidrug resistance protein MdtH; Provisional	100.0
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	100.0
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	100.0
TIGR00900	365	2A0121 H+ Antiporter protein.	100.0
PRK10406	432	alpha-ketoglutarate transporter; Provisional	100.0
PRK05122	399	major facilitator superfamily transporter; Provisi	100.0
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	100.0
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	100.0
PRK14995	495	methyl viologen resistance protein SmvA; Provision	100.0
PRK09874	408	drug efflux system protein MdtG; Provisional	100.0
KOG2532|consensus	466		100.0
PRK10504	471	putative transporter; Provisional	100.0
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	100.0
PRK09952	438	shikimate transporter; Provisional	100.0
PRK12382	392	putative transporter; Provisional	100.0
PRK03633	381	putative MFS family transporter protein; Provision	100.0
KOG3764|consensus	464		100.0
PRK15403	413	multidrug efflux system protein MdtM; Provisional	100.0
PRK03893	496	putative sialic acid transporter; Provisional	100.0
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	100.0
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	100.0
PRK11043	401	putative transporter; Provisional	100.0
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	100.0
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.98
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.98
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.98
PRK10054	395	putative transporter; Provisional	99.97
TIGR00895	398	2A0115 benzoate transport.	99.97
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.97
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.97
PRK15075	434	citrate-proton symporter; Provisional	99.97
TIGR00898	505	2A0119 cation transport protein.	99.97
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.97
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.97
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.97
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.97
PRK15011	393	sugar efflux transporter B; Provisional	99.97
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.97
PRK10133	438	L-fucose transporter; Provisional	99.97
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.97
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.97
PRK09528	420	lacY galactoside permease; Reviewed	99.97
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.97
PTZ00207	591	hypothetical protein; Provisional	99.97
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.97
PRK11010	491	ampG muropeptide transporter; Validated	99.97
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.96
KOG1330|consensus	493		99.96
PRK11902	402	ampG muropeptide transporter; Reviewed	99.96
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.96
KOG2533|consensus	495		99.96
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.96
TIGR00901	356	2A0125 AmpG-related permease.	99.95
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.95
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.95
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.95
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.95
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.95
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.94
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.94
TIGR00805	633	oat sodium-independent organic anion transporter.	99.94
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.94
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.93
KOG0569|consensus	485		99.92
PRK09669	444	putative symporter YagG; Provisional	99.91
KOG2615|consensus	451		99.91
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.9
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.9
KOG4686|consensus	459		99.9
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.9
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.89
KOG0254|consensus	513		99.89
KOG0252|consensus	538		99.88
KOG0255|consensus	521		99.88
PRK10429	473	melibiose:sodium symporter; Provisional	99.88
KOG0253|consensus	528		99.87
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.87
PRK09848	448	glucuronide transporter; Provisional	99.87
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.87
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.86
PF13347	428	MFS_2: MFS/sugar transport protein	99.86
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.86
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.84
PRK11462	460	putative transporter; Provisional	99.84
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.83
COG2211	467	MelB Na+/melibiose symporter and related transport	99.79
KOG2563|consensus	480		99.74
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.72
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.7
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.67
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.67
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.66
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.65
KOG1330|consensus	493		99.65
PRK11663	434	regulatory protein UhpC; Provisional	99.64
KOG3626|consensus	735		99.63
PRK10054	395	putative transporter; Provisional	99.63
PRK10091	382	MFS transport protein AraJ; Provisional	99.6
TIGR00900	365	2A0121 H+ Antiporter protein.	99.6
TIGR00891	405	2A0112 putative sialic acid transporter.	99.59
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.59
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.59
PRK03545	390	putative arabinose transporter; Provisional	99.58
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.58
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.58
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.58
PRK10504	471	putative transporter; Provisional	99.58
TIGR00893	399	2A0114 d-galactonate transporter.	99.57
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.57
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.56
PRK03699	394	putative transporter; Provisional	99.56
PRK10489	417	enterobactin exporter EntS; Provisional	99.56
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.56
PRK12307	426	putative sialic acid transporter; Provisional	99.56
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.55
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.55
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.55
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.54
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.53
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.52
KOG2816|consensus	463		99.52
PRK09874	408	drug efflux system protein MdtG; Provisional	99.52
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.52
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.52
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.51
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.51
PRK05122	399	major facilitator superfamily transporter; Provisi	99.51
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.5
PRK09705	393	cynX putative cyanate transporter; Provisional	99.5
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.5
PRK11043	401	putative transporter; Provisional	99.5
TIGR00895	398	2A0115 benzoate transport.	99.49
PRK12382	392	putative transporter; Provisional	99.49
PRK03893	496	putative sialic acid transporter; Provisional	99.49
PLN00028	476	nitrate transmembrane transporter; Provisional	99.49
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.49
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.49
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.49
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.48
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	99.48
KOG2325|consensus	488		99.48
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.48
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.48
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.47
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.47
PRK03633	381	putative MFS family transporter protein; Provision	99.47
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.46
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.46
PRK09528	420	lacY galactoside permease; Reviewed	99.46
KOG3764|consensus	464		99.45
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.45
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.45
PRK11902	402	ampG muropeptide transporter; Reviewed	99.44
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.44
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.43
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.43
PRK15011	393	sugar efflux transporter B; Provisional	99.43
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	99.42
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	99.42
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.41
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.41
PRK11010	491	ampG muropeptide transporter; Validated	99.39
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.39
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.38
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.37
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.37
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.37
PRK10642	490	proline/glycine betaine transporter; Provisional	99.36
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.34
KOG4332|consensus	454		99.33
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.33
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.32
TIGR00898	505	2A0119 cation transport protein.	99.32
TIGR00901	356	2A0125 AmpG-related permease.	99.31
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.31
PRK09952	438	shikimate transporter; Provisional	99.29
TIGR00805	633	oat sodium-independent organic anion transporter.	99.29
PRK10133	438	L-fucose transporter; Provisional	99.29
PRK15075	434	citrate-proton symporter; Provisional	99.28
KOG2532|consensus	466		99.26
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.25
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.25
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	99.24
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.23
PTZ00207	591	hypothetical protein; Provisional	99.22
KOG2615|consensus	451		99.2
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.2
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.18
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.15
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.12
KOG3762|consensus	618		99.12
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.1
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.08
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.07
KOG3098|consensus	461		99.06
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	99.05
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.05
KOG2504|consensus	509		99.04
KOG0255|consensus	521		99.04
KOG2533|consensus	495		99.03
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.98
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	98.97
KOG0254|consensus	513		98.9
PRK09669	444	putative symporter YagG; Provisional	98.88
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.87
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.86
PF13347	428	MFS_2: MFS/sugar transport protein	98.84
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	98.82
PRK10429	473	melibiose:sodium symporter; Provisional	98.81
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	98.78
KOG0569|consensus	485		98.77
KOG3810|consensus	433		98.74
COG2270	438	Permeases of the major facilitator superfamily [Ge	98.73
PRK11462	460	putative transporter; Provisional	98.71
KOG2325|consensus	488		98.7
KOG0252|consensus	538		98.64
KOG0637|consensus	498		98.64
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.58
COG0477	338	ProP Permeases of the major facilitator superfamil	98.51
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.51
PRK09848	448	glucuronide transporter; Provisional	98.5
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.49
KOG3574|consensus	510		98.48
KOG3762|consensus	618		98.45
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	98.36
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	98.35
COG2211	467	MelB Na+/melibiose symporter and related transport	98.33
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.31
KOG0253|consensus	528		98.31
KOG4686|consensus	459		98.31
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.29
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	98.28
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	98.25
PF12832	77	MFS_1_like: MFS_1 like family	98.21
KOG3880|consensus	409		98.17
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	98.1
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	98.06
COG0477	338	ProP Permeases of the major facilitator superfamil	98.01
KOG2563|consensus	480		97.85
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	97.83
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	97.82
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.74
KOG2816|consensus	463		97.7
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	97.68
KOG1237|consensus	571		97.67
PF12832	77	MFS_1_like: MFS_1 like family	97.51
PRK03612	521	spermidine synthase; Provisional	97.51
KOG0637|consensus	498		97.39
KOG3626|consensus	735		97.37
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	97.25
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	97.13
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	97.09
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	96.78
KOG1479|consensus	406		96.71
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	96.68
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	96.58
KOG3574|consensus	510		96.47
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	96.2
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	96.05
PRK03612	521	spermidine synthase; Provisional	95.95
KOG4830|consensus	412		95.74
KOG1237|consensus	571		95.26
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	95.07
KOG2601|consensus	503		94.83
KOG1479|consensus	406		93.42
KOG4332|consensus	454		91.98
COG3202	509	ATP/ADP translocase [Energy production and convers	90.98
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	90.18
COG3202	509	ATP/ADP translocase [Energy production and convers	89.19
KOG3097|consensus	390		88.91
KOG3098|consensus	461		88.8
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	88.46

>KOG2504|consensus

Probab=100.00  E-value=3.9e-46  Score=370.86  Aligned_cols=423  Identities=40%  Similarity=0.734  Sum_probs=350.5

Q ss_pred             CCcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHH
Q psy15069          1 DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLC   80 (461)
Q Consensus         1 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~   80 (461)
                      ||+.+++|++.++++++++.++++++|+.++....+.+++|+.+.+.||||.|+++++|.++.++++++.+|++++|+++
T Consensus        59 ~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~  138 (509)
T KOG2504|consen   59 DGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLY  138 (509)
T ss_pred             hcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI  160 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~  160 (461)
                      ++++++.|+|.++.+.++..++.+||+|||++|+|+..+|.++|.++.|++...+++.+|||+++++.+.+.+...++..
T Consensus       139 lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~  218 (509)
T KOG2504|consen  139 LTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGA  218 (509)
T ss_pred             HHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069        161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (461)
                      .++|..+.....+.+     +.+....+.+....+.                   +......+....+    .++.+++.
T Consensus       219 ~~rp~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~----~~~~~~~~  270 (509)
T KOG2504|consen  219 LLRPLSPPKKPNEEK-----DLRNSAASVESTPKPV-------------------ELRISERDSGLKK----LSLSNLAT  270 (509)
T ss_pred             HcCCCCcCCCchhhh-----hhcccccccccccccc-------------------ccccccCCCCCCc----ccccchhh
Confidence            998865333211000     0000000000000000                   0000000000000    00000000


Q ss_pred             ccccCC-ch--hhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069        241 TCLNLS-DD--TKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSR  317 (461)
Q Consensus       241 ~~~~~~-~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~  317 (461)
                      ..+..+ ..  ..+.....++.+++|+|.|+.+.+...+...++.....++|.|.++.|++..+++.++++.++.+++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gR  350 (509)
T KOG2504|consen  271 LKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGR  350 (509)
T ss_pred             hhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhh
Confidence            000000 00  011112245578999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069        318 VILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL  397 (461)
Q Consensus       318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  397 (461)
                      ++.|+++|+...++..+..+++++.+++.+.+++.++++.++...+++|++.|........++.|+.+.++...++|+..
T Consensus       351 i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l  430 (509)
T KOG2504|consen  351 IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLL  430 (509)
T ss_pred             hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHH
Confidence            99999999977778888889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH-HhhHhHhh
Q psy15069        398 LFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP-SLQSYLLK  451 (461)
Q Consensus       398 ~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~-~~~~~~~~  451 (461)
                      .+.+++..+||+++|+++|.+|+|...|++.++..+++..+++..+ ..+++.++
T Consensus       431 ~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~~~~~~~~~~  485 (509)
T KOG2504|consen  431 LFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILRECLKRREKS  485 (509)
T ss_pred             HHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhHHHHHhcccc
Confidence            9999999999999999999999999999999999999998888888 45544433

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-42  Score=321.48  Aligned_cols=386  Identities=14%  Similarity=0.143  Sum_probs=317.0

Q ss_pred             ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069          4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI   83 (461)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~   83 (461)
                      .+.|++.+|++++|.++|.+|+|++.|++.+.|+++..+.|.+.||.++|+.+..|+++.++..++++++++++.+.+++
T Consensus        45 RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~  124 (448)
T COG2271          45 RKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLW  124 (448)
T ss_pred             HHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999864


Q ss_pred             hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHH--HHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPII--DYTVREYGWKITLLVLSVTVLSAVLFGI  160 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~--~~l~~~~gw~~~f~i~~~~~l~~~i~~~  160 (461)
                       ++.|..+|+.+|++...+.+||+ |+||+..++.+...++|+.+.|++.  +.+...++||..|++-|++++++.++.+
T Consensus       125 -~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~  203 (448)
T COG2271         125 -VLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILL  203 (448)
T ss_pred             -HHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Confidence             89999999999999999999995 8999999999999999999999999  8888888999999999999998888777


Q ss_pred             hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCc-cccccccCC-CCCCCCccc
Q psy15069        161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVIST-QAQIDSKAT-VPESESTED  238 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~  238 (461)
                      +..+++|+..-                                              +|+ ++    -|. +.+..++++
T Consensus       204 ~~~rd~Pqs~G----------------------------------------------LP~ie~----~~~d~~e~~~~~~  233 (448)
T COG2271         204 FLLRDRPQSEG----------------------------------------------LPPIEE----YRGDPLEIYEEEK  233 (448)
T ss_pred             HHhCCCccccC----------------------------------------------CCCHHH----hhcCchhhhhhhc
Confidence            76655433221                                              000 00    000 000000000


Q ss_pred             ccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069        239 KTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSR  317 (461)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~  317 (461)
                              +...-+.++.+..-+++||.+|.+++++++.+...+++..|.|.|+ |..|+|..++.+..+.+-.++++|.
T Consensus       234 --------~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~  305 (448)
T COG2271         234 --------ENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT  305 (448)
T ss_pred             --------cCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH
Confidence                    0000233444445689999999999999999999999999999999 8889999999999999999999999


Q ss_pred             hhhhhccCCCCc-chhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHH
Q psy15069        318 VILGYISDRPCV-NRLYIYNGCLAICGAATVICAFCY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFG  394 (461)
Q Consensus       318 ~~~g~l~dr~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  394 (461)
                      +++||++||.-+ ||..+-.++++...+++....+.+  +++...++.++.|+......-+.-....|..|++..|++.|
T Consensus       306 Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~G  385 (448)
T COG2271         306 LLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATG  385 (448)
T ss_pred             HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhc
Confidence            999999999643 344444455555555555555555  45777788888998876666677777899999999999999


Q ss_pred             HHHHHHHh-hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHhH
Q psy15069        395 LLLLFQGI-ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYL  449 (461)
Q Consensus       395 ~~~~~~~~-g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~  449 (461)
                      +.+.+.++ |.+.+....|++.|.+| |...|++..+.++++.+++....+.++++
T Consensus       386 f~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~a~l~~lll~~~~~~~~~~  440 (448)
T COG2271         386 FVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIAALLAILLLLPVWNAEERK  440 (448)
T ss_pred             hhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHHHHHHHHHHHHHHhhcchh
Confidence            99999999 89999999999999975 99999998888888887776665554443

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=100.00  E-value=7e-41  Score=335.06  Aligned_cols=382  Identities=31%  Similarity=0.592  Sum_probs=302.2

Q ss_pred             ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069          4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI   83 (461)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~   83 (461)
                      .++++++.|++++++|.+.++.+++.+.+.+...+++|+.|++.||+|||++++.+.++.+++.++++++++++.+++..
T Consensus        35 ~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~  114 (455)
T TIGR00892        35 PKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTA  114 (455)
T ss_pred             hcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999987655


Q ss_pred             hccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      |++.|++.+...++...++.+|++++|++++|+..++..+|..++|++++.+.+.+|||++|++.++++++..++.++++
T Consensus       115 ~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~  194 (455)
T TIGR00892       115 GFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMR  194 (455)
T ss_pred             HHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence            78999999877777778888999999999999999999999999999999999999999999999998887666655555


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      ++++.++.++.++   +++      .++                             +      +    ++++.+ .   
T Consensus       195 ~~~~~~~~~~~~~---~~~------~~~-----------------------------~------~----~~~~~~-~---  222 (455)
T TIGR00892       195 PVGPSQRVSKSKS---KEG------LPP-----------------------------D------G----STKKLS-K---  222 (455)
T ss_pred             CCCcccccccccc---ccc------CCC-----------------------------C------C----cccccc-c---
Confidence            5432211000000   000      000                             0      0    000000 0   


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                         ........+..+.+++++|.++...+..++...+.+....++|.|.++.|++..+++++.++.+++.++++++.|++
T Consensus       223 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l  299 (455)
T TIGR00892       223 ---KSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLI  299 (455)
T ss_pred             ---cchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               00001111222235688999998888888888888888899999998899999999999999999999999999999


Q ss_pred             cCCCCc--chhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069        324 SDRPCV--NRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG  401 (461)
Q Consensus       324 ~dr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  401 (461)
                      +||...  ++...+..++++.++..++....++.+.+++..+++|++.+...+...+++.|.+|++++++++|+.+...+
T Consensus       300 ~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  379 (455)
T TIGR00892       300 AGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVEC  379 (455)
T ss_pred             hcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHH
Confidence            997422  333333344444445445555667778888888999999998889999999999999999999999999999


Q ss_pred             hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      +|.++||.++|.+.|..|+|+..|++.+++.+++.+..+
T Consensus       380 lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~  418 (455)
T TIGR00892       380 CAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA  418 (455)
T ss_pred             HHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence            999999999999999988899999998888777665433

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=100.00  E-value=5.6e-39  Score=323.02  Aligned_cols=381  Identities=12%  Similarity=0.046  Sum_probs=282.9

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhc-----ccchhhH
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVF-----AKNVITL   79 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~-----~~~~~~l   79 (461)
                      +.+++..|++++|+|++..+.|++.+.+.+++.+++++.|.+.||+|+|+++..+.++++++.++.++     ++|++.+
T Consensus        46 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  125 (467)
T PRK09556         46 KNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLM  125 (467)
T ss_pred             cChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence            45778899999999999999999999999999999999999999999999998888887777765544     6899999


Q ss_pred             HHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh---chhHHHHHHHHHHHHH
Q psy15069         80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY---GWKITLLVLSVTVLSA  155 (461)
Q Consensus        80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~---gw~~~f~i~~~~~l~~  155 (461)
                      ++ .|+++|++.+...+....++.+|+| ++||+++|+...+.++|.++++++...+.+.+   +||..|.+.++++++.
T Consensus       126 ~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~  204 (467)
T PRK09556        126 IA-LWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALII  204 (467)
T ss_pred             HH-HHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHH
Confidence            98 4999999999999999999999995 78999999999999999999999988777654   6999999988888777


Q ss_pred             HHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCC
Q psy15069        156 VLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESES  235 (461)
Q Consensus       156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (461)
                      .+..+++.++++++....+.     ++..            .+.                  . ++++    +    .++
T Consensus       205 ~i~~~~~~~~~p~~~~~~~~-----~~~~------------~~~------------------~-~~~~----~----~~~  240 (467)
T PRK09556        205 GFIGLRYGSDSPEELGWGKA-----EEIF------------GEP------------------I-SEED----K----ETE  240 (467)
T ss_pred             HHHHHHhCCCChhhcCCCCh-----hhcc------------cCc------------------c-chhh----h----ccc
Confidence            66655554432211100000     0000            000                  0 0000    0    000


Q ss_pred             cccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhh
Q psy15069        236 TEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANM  314 (461)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~  314 (461)
                      + +       +.    ...+......+|+|.+|...+..++.+..++....|+|.|+ +++|++..++++..+...++.+
T Consensus       241 ~-~-------~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~  308 (467)
T PRK09556        241 S-T-------DM----TKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGAL  308 (467)
T ss_pred             c-c-------cC----cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence            0 0       00    00011111368999999999999888888888889999999 6689999999999999999999


Q ss_pred             hhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHH
Q psy15069        315 VSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFG  394 (461)
Q Consensus       315 ~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  394 (461)
                      ++++++|+++||+++|+..+........+...+.....++.+...+..++.|++.............|.+|++++|++.|
T Consensus       309 ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~g  388 (467)
T PRK09556        309 VGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANG  388 (467)
T ss_pred             HHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHH
Confidence            99999999999987665543322222222222222333455555566667775543333333456679999999999999


Q ss_pred             HHHHHHHh-hhhhccceeeeeec------------ccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        395 LLLLFQGI-ASLVGPPIAGFLYD------------STLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       395 ~~~~~~~~-g~~~gp~i~g~l~~------------~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      +.+...++ |.+++|.+.|++.|            .. +|+..|++.+++.+++.+..+.+.
T Consensus       389 i~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~  449 (467)
T PRK09556        389 IKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-GWAGTFAALDIAAIGCICLMAIVA  449 (467)
T ss_pred             HHHHHHHHHhHHHHhhhHHHHhccccccccccccccc-ChHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999997 77999999999999            44 499999999888888877766654

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=100.00  E-value=5.4e-38  Score=308.83  Aligned_cols=353  Identities=12%  Similarity=0.086  Sum_probs=280.3

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      ++.+++.|++++|+|+|+.+.|++.+++.+++.+++++.|++.||+|||+++..+..+++++.+++++++|++.+++. |
T Consensus        26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~-r  104 (393)
T PRK09705         26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSS-A  104 (393)
T ss_pred             hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHH-H
Confidence            678999999999999999999999999999999999999999999999999999999999999999999999999875 9


Q ss_pred             ccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      +++|+|.+...+....++.+|+|++|++++|+..++..+|..+++++++.+.+.+ |||+.+.+.++..++..+..++..
T Consensus       105 ~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~  184 (393)
T PRK09705        105 LLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS  184 (393)
T ss_pred             HHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998888888999999999999999999999999999999999988876 899998877666554433222221


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      ++  .|+++ ++                                                           +        
T Consensus       185 ~~--~~~~~-~~-----------------------------------------------------------~--------  194 (393)
T PRK09705        185 AR--EVASS-HK-----------------------------------------------------------T--------  194 (393)
T ss_pred             cC--CCccc-cC-----------------------------------------------------------C--------
Confidence            11  11100 00                                                           0        


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                         +   ..     ..+.+++|+.|.+.+..++....++....|+|.++++.|.+..+++...+...++.++++++.|++
T Consensus       195 ---~---~~-----~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l  263 (393)
T PRK09705        195 ---T---TT-----PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAM  263 (393)
T ss_pred             ---C---cC-----CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence               0   00     013457778888777777777788888899999998899999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHH
Q psy15069        324 SDRPCVNRLYIYNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQG  401 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~  401 (461)
                      .||+++++....  +..+..+...+... .++...  ...++.|++.+...+.......+..+ ++++++..|+.+....
T Consensus       264 ~~r~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~--~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  339 (393)
T PRK09705        264 ARHQDRRKLLML--ALVLQLVGFCGFIWLPLQLPV--LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF  339 (393)
T ss_pred             HhhccchHHHHH--HHHHHHHHHHHHHHccchHHH--HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence            999765544433  33333333333222 222222  22345677777777776666667774 5789999999999999


Q ss_pred             hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      ++..++|.+.|++.|+.|+|+..|++.+++.++..+....++
T Consensus       340 ~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  381 (393)
T PRK09705        340 IIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA  381 (393)
T ss_pred             HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999998887777665544443

>PRK11663 regulatory protein UhpC; Provisional

Probab=100.00  E-value=7.3e-38  Score=311.99  Aligned_cols=378  Identities=13%  Similarity=0.109  Sum_probs=279.2

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      +.++.+.|++.+++|.|..+.|++.+++.+++.+++++.|++.||+|+|+++..+.++.+++.++.+++++++.+++. |
T Consensus        40 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~  118 (434)
T PRK11663         40 KSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALL-W  118 (434)
T ss_pred             hhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH-H
Confidence            356788999999999999999999999999999999999999999999999999999999999999999999999875 8


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      ++.|++.+..++....++.+|+| |+|++++++.+++.++|.+++|++.+.+.+.+|||+.|++.++++++..+...+..
T Consensus       119 ~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~  198 (434)
T PRK11663        119 VLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRL  198 (434)
T ss_pred             HHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999888888899999996 68999999999999999999999999999999999999999887766544444333


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      ++++...  +..+..  +.       +++                            .+          +.+++.     
T Consensus       199 ~~~p~~~--~~~~~~--~~-------~~~----------------------------~~----------~~~~~~-----  224 (434)
T PRK11663        199 RDKPQAM--GLPSVG--EW-------RHD----------------------------AL----------ELAQQQ-----  224 (434)
T ss_pred             CCCHhhc--CCCCcc--cc-------ccc----------------------------cc----------ccchhc-----
Confidence            3322111  000000  00       000                            00          000000     


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGY  322 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~  322 (461)
                         ++.+.+.++......+++|.+|.+.+..++.+...+.+..|+|.|+ ++.|++..+++...+...++.++++++.|+
T Consensus       225 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~  301 (434)
T PRK11663        225 ---EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGW  301 (434)
T ss_pred             ---cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence               0000011111111256889999888888877777778888999999 678999999999999999999999999999


Q ss_pred             ccCCCCcc-hhHH--H-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069        323 ISDRPCVN-RLYI--Y-NGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL  398 (461)
Q Consensus       323 l~dr~~~~-~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  398 (461)
                      ++||+.++ |+..  . ..+..+..+.+.... ..+........+..|++.............|.+|+++++++.|+.++
T Consensus       302 l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~  380 (434)
T PRK11663        302 GSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGL  380 (434)
T ss_pred             hHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHH
Confidence            99997322 2221  1 122222222222222 22333333333444443332233344567899999999999999999


Q ss_pred             HHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        399 FQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       399 ~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      ..++|++++|.+.|++.|+.| |+..|+..+++.+++++.....
T Consensus       381 ~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~  423 (434)
T PRK11663        381 FAYLGAALSGYPLAKVLEIWH-WTGFFVVISIAAGISALLLLPF  423 (434)
T ss_pred             HHHHHHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999986 9999999998888777655443

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-37  Score=292.87  Aligned_cols=354  Identities=17%  Similarity=0.214  Sum_probs=296.5

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccc
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTG   88 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G   88 (461)
                      -++|++++|+|+|..+.|+..|.|.+++.++.|+...+.||+.||++++..+.++.++.+++++++||+.+++. |++.|
T Consensus        34 gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~a-R~~~g  112 (394)
T COG2814          34 GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLA-RALAG  112 (394)
T ss_pred             hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHH
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999996 99999


Q ss_pred             ccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15069         89 LGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEE  167 (461)
Q Consensus        89 ~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~  167 (461)
                      +..|..++....+..+.. |+||++++++...|..++.+++.|++.++.+.+|||++|++.++++++..+..+...| ++
T Consensus       113 ~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-~~  191 (394)
T COG2814         113 LAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-PS  191 (394)
T ss_pred             HHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC-Cc
Confidence            999999999999999988 5899999999999999999999999999999999999999999999999888888777 21


Q ss_pred             CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCc
Q psy15069        168 QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSD  247 (461)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (461)
                      ..++ +.                                                                       +.
T Consensus       192 ~~~~-~~-----------------------------------------------------------------------~~  199 (394)
T COG2814         192 EISG-SL-----------------------------------------------------------------------PG  199 (394)
T ss_pred             cCCC-CC-----------------------------------------------------------------------Cc
Confidence            1110 00                                                                       00


Q ss_pred             hhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069        248 DTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR  326 (461)
Q Consensus       248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr  326 (461)
                      +.++.      .+++|+|+.+..++..++...+.+..++|+.+++ +..|++.+..++++..++++.++|++++|++.||
T Consensus       200 ~~~~~------~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr  273 (394)
T COG2814         200 PLRTL------LRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR  273 (394)
T ss_pred             chhHH------HHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            00011      2468999999999999999999999999999999 5679999999999999999999999999999999


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhh
Q psy15069        327 PCVNRLYIYNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASL  405 (461)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~  405 (461)
                       +.++...  ....+..+.++.+.+ ..+.+......+++|+..............+.. ++++..+.+++....++|..
T Consensus       274 -~~~~~l~--~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia  349 (394)
T COG2814         274 -GPRRALI--AALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIA  349 (394)
T ss_pred             -cchhHHH--HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHH
Confidence             4444433  233333333333343 345556666666788877766666666666644 48899999999999999999


Q ss_pred             hccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069        406 VGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS  447 (461)
Q Consensus       406 ~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~  447 (461)
                      +|..++|.++|+. +|....+..+.+.+++.++.+...+.++
T Consensus       350 ~GA~lGG~v~~~~-g~~~~~~~~a~l~~~a~~~~~~~~~~~~  390 (394)
T COG2814         350 LGAALGGLVLDAL-GYAATGWVGAALLLLALLLALLSARKDR  390 (394)
T ss_pred             HHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999995 5999999999999888887766544433

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=100.00  E-value=4.5e-38  Score=307.54  Aligned_cols=357  Identities=20%  Similarity=0.269  Sum_probs=287.2

Q ss_pred             CcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHH
Q psy15069          2 GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCI   81 (461)
Q Consensus         2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i   81 (461)
                      |..|+++++.|++.+++|+|..+.|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+++++++|++.+++
T Consensus        17 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (377)
T TIGR00890        17 GYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYL   96 (377)
T ss_pred             hHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069         82 TIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL  161 (461)
Q Consensus        82 ~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~  161 (461)
                      + |++.|++.+..++.....+.+|+||+|++++++...+.++|..+++++.+.+.+.+|||+.|++.++++++..+..++
T Consensus        97 ~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  175 (377)
T TIGR00890        97 T-YGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF  175 (377)
T ss_pred             H-HHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            5 899999999888888888899999999999999999999999998899888888889999999999988887766655


Q ss_pred             cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                      +.+++++++  +++                                                         +++.     
T Consensus       176 ~~~~~~~~~--~~~---------------------------------------------------------~~~~-----  191 (377)
T TIGR00890       176 LIGYPPGQL--IKT---------------------------------------------------------NIEV-----  191 (377)
T ss_pred             heecCchhc--ccc---------------------------------------------------------Cccc-----
Confidence            544332111  000                                                         0000     


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILG  321 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g  321 (461)
                           ++.+...     .+.+|+|.++.+.+..++..........+.+.+.++.|.+..+.+.+.+...++.++++++.|
T Consensus       192 -----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  261 (377)
T TIGR00890       192 -----SVKDYTV-----WEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLG  261 (377)
T ss_pred             -----chhhhhH-----HHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 0000111     135678888887777776666665566677778888999998999999999999999999999


Q ss_pred             hccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh--HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069        322 YISDRPCVNRLYIYNGCLAICGAATVICAFCYN--YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF  399 (461)
Q Consensus       322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  399 (461)
                      ++.||+++++...  .+....+++.++..+.++  .+......++.|++.+...+..+.++.|.+|+++++++.|+.+..
T Consensus       262 ~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  339 (377)
T TIGR00890       262 ALSDKIGRQKTMS--IVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTA  339 (377)
T ss_pred             HHHHHHhhhhhhh--HHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHH
Confidence            9999976554433  444455555444444443  223334456778888777777788899999999999999999999


Q ss_pred             HHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069        400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG  436 (461)
Q Consensus       400 ~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~  436 (461)
                      ..+|..++|.+.|.+.|..| |+..|.+.+++.+++.
T Consensus       340 ~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~  375 (377)
T TIGR00890       340 KAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL  375 (377)
T ss_pred             HHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence            99999999999999999875 9999988887766654

>PRK03545 putative arabinose transporter; Provisional

Probab=100.00  E-value=1.5e-36  Score=298.72  Aligned_cols=347  Identities=16%  Similarity=0.181  Sum_probs=279.1

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccc
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTG   88 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G   88 (461)
                      .+.|++++|+|.|+.++|++.+.+.+++.+++++.|.+.||+|||+++..+.++.+++.+.+++++|++.+++. |+++|
T Consensus        30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~~~G  108 (390)
T PRK03545         30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLIS-RIGIA  108 (390)
T ss_pred             cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHH
Confidence            45799999999999999999999999999999999999999999999999999999999999999999999985 89999


Q ss_pred             ccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15069         89 LGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEE  167 (461)
Q Consensus        89 ~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~  167 (461)
                      ++.+..++...+.+.+++ +++|++++|+...+.++|..++|++++.+.+.+|||++|++.++++++..+......|+++
T Consensus       109 ~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~  188 (390)
T PRK03545        109 FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP  188 (390)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999988888888889988 5889999999999999999999999999999999999999999888776655444433321


Q ss_pred             CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCc
Q psy15069        168 QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSD  247 (461)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (461)
                      .++  +                                                                         .
T Consensus       189 ~~~--~-------------------------------------------------------------------------~  193 (390)
T PRK03545        189 SEH--S-------------------------------------------------------------------------G  193 (390)
T ss_pred             CCC--c-------------------------------------------------------------------------c
Confidence            100  0                                                                         0


Q ss_pred             hhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069        248 DTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR  326 (461)
Q Consensus       248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr  326 (461)
                      +. +..     .+.+|+|.++...+..++.....+....+++.++ ++.|++..+.+.+.+...++.++++++.|+++||
T Consensus       194 ~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr  267 (390)
T PRK03545        194 SL-KSL-----PLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR  267 (390)
T ss_pred             hH-HHH-----HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            00 111     1357888887666665555555555667788887 4579999999999999999999999999999999


Q ss_pred             CCcchhHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhh
Q psy15069        327 PCVNRLYIYNGCLAICGAAT-VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASL  405 (461)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~  405 (461)
                      ++++  .+. .+..+.++.. .+....++.+.+++..+++|++.+...+.....+.+..| +++++++|+.+....+|..
T Consensus       268 ~~~~--~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~  343 (390)
T PRK03545        268 HPSG--FLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIG  343 (390)
T ss_pred             cchh--HHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHH
Confidence            6543  222 2222223332 223345566777778888898877666777777888876 6889999999999999999


Q ss_pred             hccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        406 VGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       406 ~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      +||.++|+++|+.| ++..|+..+++.+++.+.....
T Consensus       344 ~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~  379 (390)
T PRK03545        344 AGALLGNQVSLHLG-LSSIGYVGAALALAALVWSILI  379 (390)
T ss_pred             HHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999985 9999999888887777665443

>TIGR00893 2A0114 d-galactonate transporter

Probab=100.00  E-value=2.9e-36  Score=296.46  Aligned_cols=378  Identities=14%  Similarity=0.158  Sum_probs=286.7

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      +.++...|.+++++|.+..+.+++.+++.++..+++++.|.+.||+|||+++..+.++.+++.+++++++|++.+++. |
T Consensus        11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   89 (399)
T TIGR00893        11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYIL-R   89 (399)
T ss_pred             HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHH-H
Confidence            456788899999999999999999999999999999999999999999999999999999999999999999999985 8


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      ++.|++.+...+....++.+++| |+|++++++.....++|.+++|++.+.+.+.+|||+.|++.+++.++..+..++..
T Consensus        90 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (399)
T TIGR00893        90 VLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFI  169 (399)
T ss_pred             HHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhhee
Confidence            99999999999999999999995 78999999999999999999999999999999999999999888877666655554


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      ++++.++.+..+     ++         +. . ...                     .     .+  .+++++++     
T Consensus       170 ~~~~~~~~~~~~-----~~---------~~-~-~~~---------------------~-----~~--~~~~~~~~-----  200 (399)
T TIGR00893       170 PDPPQKAKWLTE-----EE---------KY-I-VVG---------------------G-----LL--AEQQGKGP-----  200 (399)
T ss_pred             cCCCCccccCCH-----HH---------Hh-h-cch---------------------h-----hc--cccccccc-----
Confidence            443221100000     00         00 0 000                     0     00  00000000     


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGY  322 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~  322 (461)
                        ++..+...     ++.+|+|+++...+..++.......+..+.|.|+ ++.|.++.+.+++.+...++.++++++.|+
T Consensus       201 --~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  273 (399)
T TIGR00893       201 --STPKKYQI-----KELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGR  273 (399)
T ss_pred             --cCCCccch-----HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHH
Confidence              00001111     2457889999988888888888888999999998 668999999999999999999999999999


Q ss_pred             ccCCCCcchhHHHH------HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHH
Q psy15069        323 ISDRPCVNRLYIYN------GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLL  396 (461)
Q Consensus       323 l~dr~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  396 (461)
                      +.||+++|+..+..      .+.++.++........++.+.......+.+++.+ ..+....++.|.+|+++|+++.|+.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~  352 (399)
T TIGR00893       274 LSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLI  352 (399)
T ss_pred             HHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHH
Confidence            99997766421111      1111111111111112233333333333333444 7788889999999999999999999


Q ss_pred             HHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        397 LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       397 ~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      +...++|..++|.+.|.+.|..|+|+..|.+.+++.+++.+..+
T Consensus       353 ~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  396 (399)
T TIGR00893       353 NSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL  396 (399)
T ss_pred             HHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999987799999988888777766554

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=100.00  E-value=1e-36  Score=295.57  Aligned_cols=353  Identities=13%  Similarity=0.056  Sum_probs=266.3

Q ss_pred             ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069          4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI   83 (461)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~   83 (461)
                      -.+|+.+.|.+++|+|+|+.+.|++.+.+.+++.+++++.|.+.||+|||+++..+......+.+.....+|++.+++. 
T Consensus         7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-   85 (368)
T TIGR00903         7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLAC-   85 (368)
T ss_pred             HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHH-
Confidence            4578899999999999999999999999999999999999999999999987665555544443333333788888874 


Q ss_pred             hccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILL  162 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~  162 (461)
                      |+++|+|.+. .++....+.+|+ +|+|++++++.+++..+|.+++++++..+.+.+|||+.|++.++++++..++.++.
T Consensus        86 R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~  164 (368)
T TIGR00903        86 QLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAA  164 (368)
T ss_pred             HHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999986 455555667888 58999999999999999999999999999999999999999999988877666665


Q ss_pred             ccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069        163 RPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC  242 (461)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (461)
                      .|+.|  ++++++                                                          .+       
T Consensus       165 lp~~p--~~~~~~----------------------------------------------------------~~-------  177 (368)
T TIGR00903       165 LPALP--FQAAEG----------------------------------------------------------FG-------  177 (368)
T ss_pred             cCCCC--CCCCCC----------------------------------------------------------cc-------
Confidence            55432  210000                                                          00       


Q ss_pred             ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069        243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGY  322 (461)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~  322 (461)
                         .++..++.     ++++|+|.+|.+.+..++....++.+.+|+|.|+++.|++.. .+...++..+.+.++   .++
T Consensus       178 ---~~~~~~~~-----~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~  245 (368)
T TIGR00903       178 ---FKDAVKEF-----GALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAV  245 (368)
T ss_pred             ---hHHHHHHH-----HHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHH
Confidence               00000111     246899999999999999999999999999999988888865 566666666655555   467


Q ss_pred             ccCCCCcc--hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069        323 ISDRPCVN--RLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ  400 (461)
Q Consensus       323 l~dr~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  400 (461)
                      ++||..++  |+........+.++......+..+.+..+...++.+++.....+..+++.+|.+|++.|+++.|+.+...
T Consensus       246 ~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g  325 (368)
T TIGR00903       246 IPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTS  325 (368)
T ss_pred             hhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHH
Confidence            77775433  2222222333334444444444455455556667777777777888889999999999999999999999


Q ss_pred             HhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        401 GIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      ++++.++|++.+.+..   +....|.+.++..+++++..+
T Consensus       326 ~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       326 RAISVALALAAMLFIS---SAEAYFTFLAILITIAFAIAL  362 (368)
T ss_pred             HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987773   467788888877777766653

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=100.00  E-value=3e-36  Score=298.30  Aligned_cols=363  Identities=17%  Similarity=0.158  Sum_probs=284.0

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      +.+++..|.+.+++|.++.+.|++.+.+.++..+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |
T Consensus        32 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  110 (406)
T PRK11551         32 QSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVA-R  110 (406)
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHH-H
Confidence            456788999999999999999999999999999999999999999999999999999999999999999999999885 8


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      ++.|++.+...+....++.+++| |+|++++++.+.+..+|..+++.++..+.+..+||+.|++.+++.+...++..++.
T Consensus       111 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  190 (406)
T PRK11551        111 LLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWL  190 (406)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999988888899999995 88999999999999999999999998888888999999998877666655555544


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      |+++.+.+++.+                                                          ++++      
T Consensus       191 ~~~~~~~~~~~~----------------------------------------------------------~~~~------  206 (406)
T PRK11551        191 PESRAFAQAAGA----------------------------------------------------------GKQR------  206 (406)
T ss_pred             CCChhHHhccCc----------------------------------------------------------chhh------
Confidence            443211100000                                                          0000      


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                         +   ...+...+  ..+.+..+.+.+..++.....+....|+|.++++.|++..+.+...+...++.++++++.|++
T Consensus       207 ---~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l  278 (406)
T PRK11551        207 ---A---PVLRALFG--EGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGAL  278 (406)
T ss_pred             ---h---hhHHHHhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence               0   00000000  011223333444444445556667788999998899999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069        324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA  403 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  403 (461)
                      .||+++++...  .+.+..+++++...+.++.+.+.+..++.|++.+...+....+..|.+|+++|+++.|+.+....+|
T Consensus       279 ~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g  356 (406)
T PRK11551        279 MDRLRPRRVVL--LIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLG  356 (406)
T ss_pred             HHHHhHHHHHH--HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHH
Confidence            99965444333  3444444454555556666667777788888887788888899999999999999999999999999


Q ss_pred             hhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      ..+||.++|.+.|+.++|...++......+++.++.+.+
T Consensus       357 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (406)
T PRK11551        357 SMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL  395 (406)
T ss_pred             HHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987778877877776666666555443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=100.00  E-value=1.6e-36  Score=300.10  Aligned_cols=377  Identities=12%  Similarity=0.094  Sum_probs=271.6

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      ...+...|.+++|+|+++.++|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+++++++|++.+++. |
T Consensus        25 ~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r  103 (412)
T TIGR02332        25 INIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLL-R  103 (412)
T ss_pred             hhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-H
Confidence            345677899999999999999999999999999999999999999999999999999999999999999999999985 9


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH------hhchhHHHHHHHHHHHHHHH
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR------EYGWKITLLVLSVTVLSAVL  157 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~------~~gw~~~f~i~~~~~l~~~i  157 (461)
                      ++.|++.+...+.....+.+|+| |+|++++++.+.+.++|.++++++++.+.+      .+|||++|++.++.+++..+
T Consensus       104 ~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~  183 (412)
T TIGR02332       104 ILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGV  183 (412)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHH
Confidence            99999999988888888999996 689999999999999999999999998874      36999999999888877666


Q ss_pred             HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069        158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (461)
                      +.+++.|++|...  +.. .  ++++.          ...+.                      .+.  .+.  ..++++
T Consensus       184 ~~~~~~~~~p~~~--~~l-~--~~~~~----------~~~~~----------------------~~~--~~~--~~~~~~  222 (412)
T TIGR02332       184 MTWFWLDDSPDKA--KWL-D--EEDKK----------ALKEM----------------------IDN--DQL--TLEQPE  222 (412)
T ss_pred             HHhhccCCCcccC--CCC-C--HHHHH----------HHHHH----------------------HHh--ccc--cccccc
Confidence            6555554432211  000 0  00000          00000                      000  000  000000


Q ss_pred             cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh--CCCchhhHHHHHHHhhhhhh
Q psy15069        238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR--GVTRSNASSLISIVGAANMV  315 (461)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~  315 (461)
                      + ...+ .+...+...+      .+++|.+|...+.+++....++.+.+|+|.++++.  +.+..+.+.......++.++
T Consensus       223 ~-~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~  294 (412)
T TIGR02332       223 G-AFAH-AAMPQRSMLR------EIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIF  294 (412)
T ss_pred             c-cccc-ccccHHHHHH------HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHH
Confidence            0 0000 0000111111      13467888888888888888889999999999764  67888889999999999999


Q ss_pred             hhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069        316 SRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL  395 (461)
Q Consensus       316 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  395 (461)
                      ++++.|+++||+++|+.... ...+..++.+.+....++....+....+.+++.....+.......|.+|+++|++++|+
T Consensus       295 g~l~~g~l~dr~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~  373 (412)
T TIGR02332       295 GMIWWSRHSDRLKERKHHTA-LPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAV  373 (412)
T ss_pred             HHHHHHHHhcccCccHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHH
Confidence            99999999999875554332 22222233222222222222222222333333333334444555678899999999999


Q ss_pred             HHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHH
Q psy15069        396 LLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAI  432 (461)
Q Consensus       396 ~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~  432 (461)
                      .+...++|++++|.+.|.+.|..|+|+..+++.++..
T Consensus       374 ~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~  410 (412)
T TIGR02332       374 INATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL  410 (412)
T ss_pred             HHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence            9999999999999999999999888999988776643

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=100.00  E-value=2.4e-35  Score=295.40  Aligned_cols=381  Identities=14%  Similarity=0.127  Sum_probs=268.0

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc----chhhHHH
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK----NVITLCI   81 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~----~~~~l~i   81 (461)
                      +++...|++.++ |.++.+.|++.+++.+++.+++++.|++.||+|+|++++.+.++.+++.+++++++    +++.+++
T Consensus        47 ~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  125 (452)
T PRK11273         47 NFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFV  125 (452)
T ss_pred             HHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHH
Confidence            456788999988 99999999999999999999999999999999999999999999999998887753    6667776


Q ss_pred             HhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHH-HHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069         82 TIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPII-DYTVREYGWKITLLVLSVTVLSAVLFG  159 (461)
Q Consensus        82 ~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~-~~l~~~~gw~~~f~i~~~~~l~~~i~~  159 (461)
                       .|++.|++.+..+++....+.+|+| |+|++++|+.+++.++|..+.+++. ..+....|||+.|++.++++++..++.
T Consensus       126 -~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~  204 (452)
T PRK11273        126 -LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFA  204 (452)
T ss_pred             -HHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence             4899999999888877778888885 7899999999999999875554443 333334599999999998877766655


Q ss_pred             hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                      +++.+++++....++++    +.              .++                     .     .+. ..+++++  
T Consensus       205 ~~~~~~~~~~~~~~~~~----~~--------------~~~---------------------~-----~~~-~~~~~~~--  237 (452)
T PRK11273        205 FAMMRDTPQSCGLPPIE----EY--------------KND---------------------Y-----PDD-YNEKHEQ--  237 (452)
T ss_pred             HHHccCCHhhcCCCChh----hh--------------hhc---------------------c-----ccc-cccccCC--
Confidence            55544432111000000    00              000                     0     000 0000000  


Q ss_pred             cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhh
Q psy15069        240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRV  318 (461)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~  318 (461)
                            +    .+.++......+|+|.+|...+..++.+...+....|+|.|++ +.|++..+.+.......++.+++++
T Consensus       238 ------~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~  307 (452)
T PRK11273        238 ------E----LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTL  307 (452)
T ss_pred             ------C----ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence                  0    0111111123578999999888888888888888899999995 4799999999999999999999999


Q ss_pred             hhhhccCCCCcchhH-HHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069        319 ILGYISDRPCVNRLY-IYNGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL  395 (461)
Q Consensus       319 ~~g~l~dr~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  395 (461)
                      +.|+++||++++|+. .....+.+..+..+.+..  ..+.+..++..++.|.+..........+..|.+|++++|++.|+
T Consensus       308 ~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~  387 (452)
T PRK11273        308 LCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF  387 (452)
T ss_pred             HHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHH
Confidence            999999997444432 211112222222222212  22333444444555554333333334567799999999999999


Q ss_pred             HHHHHHhhhhh-ccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069        396 LLLFQGIASLV-GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       396 ~~~~~~~g~~~-gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~  446 (461)
                      .+...++|+.+ +|.+.|.+.|+.| |+..|++.+++++++++......+.+
T Consensus       388 ~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~  438 (452)
T PRK11273        388 TGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGE  438 (452)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99998888765 7999999999986 99999988888887776655444433

>PRK03699 putative transporter; Provisional

Probab=100.00  E-value=1.8e-35  Score=291.39  Aligned_cols=365  Identities=13%  Similarity=0.077  Sum_probs=289.6

Q ss_pred             ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069          4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI   83 (461)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~   83 (461)
                      .+.+|.+.|++.+++|+|..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++..++.++++++++++.+++. 
T Consensus        23 ~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~-  101 (394)
T PRK03699         23 VIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIA-  101 (394)
T ss_pred             HHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHH-
Confidence            3567889999999999999999999999999999999999999999999999999999999999999999999998875 


Q ss_pred             hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH-hhchhHHHHHHHHHHHHHHHHHhh
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR-EYGWKITLLVLSVTVLSAVLFGIL  161 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-~~gw~~~f~i~~~~~l~~~i~~~~  161 (461)
                      |++.|++.+...+.....+.+++| |+|++++++..++.++|..++|++.+.+.. ..|||+.|.+.+++.++..++.++
T Consensus       102 ~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~  181 (394)
T PRK03699        102 MFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF  181 (394)
T ss_pred             HHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh
Confidence            899999999888888888888886 679999999999999999999999988875 469999999988887766554433


Q ss_pred             cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                      . +.++ +++++++                                                           +++    
T Consensus       182 ~-~~p~-~~~~~~~-----------------------------------------------------------~~~----  196 (394)
T PRK03699        182 S-EFPA-LGKHAPK-----------------------------------------------------------ADK----  196 (394)
T ss_pred             c-CCcc-ccccCcc-----------------------------------------------------------ccC----
Confidence            2 2111 1100000                                                           000    


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVIL  320 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~  320 (461)
                               ...      +...++.++...+..++.....+.+..|+|.|+ +++|+++.+.+.+.+...++..+++++.
T Consensus       197 ---------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  261 (394)
T PRK03699        197 ---------PVA------KEKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIF  261 (394)
T ss_pred             ---------ccc------cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHH
Confidence                     000      011245667777777777777778889999999 6679999999999999999999999999


Q ss_pred             hhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069        321 GYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ  400 (461)
Q Consensus       321 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  400 (461)
                      |+++||+++++...  ....+..+..+++...++.+...+..++.|++.+..++...+...+..| +++++..+......
T Consensus       262 g~l~dr~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~  338 (394)
T PRK03699        262 SFIVRFFDLQRILT--VLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCG  338 (394)
T ss_pred             HHHHHHhchhhHHH--HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhh
Confidence            99999976655433  3333334444444455666666667788898888888887777777776 55678889999999


Q ss_pred             HhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHhHhhhh
Q psy15069        401 GIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRK  453 (461)
Q Consensus       401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~  453 (461)
                      ++|..++|.+.|++.|..| ++..++..+++++++.+++....+..||+++..
T Consensus       339 ~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (394)
T PRK03699        339 TIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCILLGFVSKHRQHGA  390 (394)
T ss_pred             hHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999875 889999988888888888888877777665543

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=100.00  E-value=2.8e-34  Score=282.37  Aligned_cols=344  Identities=17%  Similarity=0.199  Sum_probs=273.3

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccc
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTG   88 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G   88 (461)
                      .+.|++.+++|.++++.|+..+++.++..+++++.|++.||+|||+++..+.++.+++.++++++++++.+++. |+++|
T Consensus        41 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G  119 (394)
T PRK10213         41 SLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIG-RACLG  119 (394)
T ss_pred             hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHH-HHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999985 99999


Q ss_pred             ccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15069         89 LGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEE  167 (461)
Q Consensus        89 ~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~  167 (461)
                      ++.+...+....++.+++| |+|++++++..++.++|.+++|++++.+.+.+|||+.|++.++++++..+..+...|++ 
T Consensus       120 ~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~-  198 (394)
T PRK10213        120 LALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL-  198 (394)
T ss_pred             HhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC-
Confidence            9999989999999999995 88999999999999999999999999999999999999998877665443333222321 


Q ss_pred             CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCc
Q psy15069        168 QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSD  247 (461)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (461)
                       +++++                                                                         +
T Consensus       199 -~~~~~-------------------------------------------------------------------------~  204 (394)
T PRK10213        199 -PGEPS-------------------------------------------------------------------------H  204 (394)
T ss_pred             -Ccccc-------------------------------------------------------------------------c
Confidence             11000                                                                         0


Q ss_pred             hhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhH-hhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069        248 DTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYI-VKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDR  326 (461)
Q Consensus       248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr  326 (461)
                      .. +..     .+.+|+|.++...+..++.....+....+. |.+.++.|+++.+.+.++...+++.++++++.+++.||
T Consensus       205 ~~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r  278 (394)
T PRK10213        205 QK-QNT-----FRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR  278 (394)
T ss_pred             ch-hHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            00 111     135788888887776666666666666676 56668889999999999999999999999999999999


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhh
Q psy15069        327 PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLV  406 (461)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  406 (461)
                      .  +++.+.....+.....+++....++.+.+....++.|++.+...+...+.+.+..| ++.++..++.....++|..+
T Consensus       279 ~--~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~  355 (394)
T PRK10213        279 S--VKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTC  355 (394)
T ss_pred             c--chhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHH
Confidence            3  33332222232233333333445567777778889999999888888888888887 55778888888888999999


Q ss_pred             ccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069        407 GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM  438 (461)
Q Consensus       407 gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~  438 (461)
                      ||.++|+++|..| +...++..+++.++..+.
T Consensus       356 G~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~  386 (394)
T PRK10213        356 GAAIGGYALDNIG-LTSPLMLSGTLMLLTALL  386 (394)
T ss_pred             HHHHHHHHHhccC-hhhHHHHHHHHHHHHHHH
Confidence            9999999999875 777777766655554433

>PRK10091 MFS transport protein AraJ; Provisional

Probab=100.00  E-value=3.6e-34  Score=280.90  Aligned_cols=353  Identities=16%  Similarity=0.181  Sum_probs=265.8

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      .+...+|.+++|+|.+.++.|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+++++++|++.+++. |+
T Consensus        21 ~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~-r~   99 (382)
T PRK10091         21 GIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIG-RL   99 (382)
T ss_pred             HHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH-HH
Confidence            44567899999999999999999999999999999999999999999999999999999999999999999999985 99


Q ss_pred             cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +.|++.+...+.....+.++++ ++|++++++...+..+|..++|++++.+.+.+|||++|++.+++.++..+..++..|
T Consensus       100 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp  179 (382)
T PRK10091        100 VSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP  179 (382)
T ss_pred             HHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999888877788889985 679999999999999999999999999999899999999999887766655444444


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      +.++++    +                                                                     
T Consensus       180 ~~~~~~----~---------------------------------------------------------------------  186 (382)
T PRK10091        180 DIRDEA----K---------------------------------------------------------------------  186 (382)
T ss_pred             CCCccc----c---------------------------------------------------------------------
Confidence            321000    0                                                                     


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                        .+.++..      +.+|++..|...+..++.+........+++.++ +..|.++.+.+++.+..+++.++++++.|++
T Consensus       187 --~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l  258 (382)
T PRK10091        187 --GGLREQF------HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRL  258 (382)
T ss_pred             --cCHHHHH------HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHhee
Confidence              0000111      236777777766665555555555566777777 5689999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHhhhhhhHHHHHH-HHHHHhcCccchhHHHHHHHHHHH
Q psy15069        324 SDRPCVNRLYIYNGCLAICGAATVICA-FCYNYVELAIYAGVFGAMIGAYVGLTS-VILVDLLGLDRLTNAFGLLLLFQG  401 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~  401 (461)
                      .||+++++...  .+..+.++..++.. ..++.+...+..++.+++.....+... ....+..+++.++.+  ..+....
T Consensus       259 ~~r~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  334 (382)
T PRK10091        259 SGRYSPLRIAA--VTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFN  334 (382)
T ss_pred             ccccCchhHHH--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHH
Confidence            99976554433  33344444433332 234444444555555665443333333 334444444544443  4467788


Q ss_pred             hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      +|.++||.++|++.|..++|+..+...+++.++.........+
T Consensus       335 ~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (382)
T PRK10091        335 LGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR  377 (382)
T ss_pred             HHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999998778999999887776666554444333

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=100.00  E-value=5e-35  Score=294.33  Aligned_cols=366  Identities=14%  Similarity=0.101  Sum_probs=266.2

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      ++++.+.|.+.+++|++..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++++++.++++++++++.++++ |
T Consensus        53 ~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~-r  131 (476)
T PLN00028         53 FAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAV-R  131 (476)
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-H
Confidence            456678899999999999999999999999999999999999999999999999999999999999999999988875 8


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH----H-----hhchhHHHHHHHHHHHH
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV----R-----EYGWKITLLVLSVTVLS  154 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~----~-----~~gw~~~f~i~~~~~l~  154 (461)
                      ++.|++.+.. .+....+.+|+| ++|++++|+..++.++|..+++.+...+.    +     ..|||++|++.++++++
T Consensus       132 ~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~  210 (476)
T PLN00028        132 FFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHII  210 (476)
T ss_pred             HHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHH
Confidence            9999988764 445567889995 78999999998766666666655554332    2     25899999999999887


Q ss_pred             HHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCC
Q psy15069        155 AVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESE  234 (461)
Q Consensus       155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (461)
                      ..++.+++.+++  |+++ .+     +.                                      ++           +
T Consensus       211 ~~l~~~~~~~~~--p~~~-~~-----~~--------------------------------------~~-----------~  233 (476)
T PLN00028        211 MGILVLTLGQDL--PDGN-YR-----EL--------------------------------------KK-----------S  233 (476)
T ss_pred             HHHHHHHHcCcC--CCCc-hh-----hH--------------------------------------Hh-----------c
Confidence            766655543322  1100 00     00                                      00           0


Q ss_pred             CcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhh
Q psy15069        235 STEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAAN  313 (461)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~  313 (461)
                      ++.+       +.+.+...     .+.++++++|.+.+.+++.....+.+..++|.|+ ++.|++..+++.+.++.+++.
T Consensus       234 ~~~~-------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~  301 (476)
T PLN00028        234 GTMP-------KDSFSKVL-----RYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMN  301 (476)
T ss_pred             Cccc-------cccHHHHH-----HHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            0000       00001111     1347788888888777766666666778899998 667999999999999999999


Q ss_pred             hhhhhhhhhccCCCCcc-----hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc
Q psy15069        314 MVSRVILGYISDRPCVN-----RLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR  388 (461)
Q Consensus       314 ~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~  388 (461)
                      +++++++|+++||+++|     |+........+.++..+++...++.+...+.+++++++.+...+...++..+.. +++
T Consensus       302 ~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~  380 (476)
T PLN00028        302 LFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRS  380 (476)
T ss_pred             HHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhh
Confidence            99999999999997654     333433444444444444455555555555666677766655555666666654 478


Q ss_pred             hhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        389 LTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      +|++.|+.+....+|++++|.+.+  .+..++|...|++.+++.+++.++.++++.
T Consensus       381 ~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~  434 (476)
T PLN00028        381 LGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPVAFIHF  434 (476)
T ss_pred             chhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHHHheec
Confidence            999999988877777777776643  223457999999999888888888777653

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=100.00  E-value=1.1e-34  Score=283.86  Aligned_cols=362  Identities=15%  Similarity=0.139  Sum_probs=271.7

Q ss_pred             ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069          4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI   83 (461)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~   83 (461)
                      .+.++...|.+++++|.+..+.|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.++.+++++++.+++. 
T Consensus        11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   89 (379)
T TIGR00881        11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAAL-   89 (379)
T ss_pred             HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHH-
Confidence            3567788999999999999999999999999999999999999999999999999999999999999999999999985 


Q ss_pred             hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhH-HHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAP-IIDYTVREYGWKITLLVLSVTVLSAVLFGIL  161 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~-l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~  161 (461)
                      |++.|++.+...+...+++.+++| ++|++++++...+..+|..++|+ +...+.+..|||+.|++.+++.++..+..++
T Consensus        90 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (379)
T TIGR00881        90 WALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFL  169 (379)
T ss_pred             HHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhe
Confidence            899999999999999999999995 78999999999999999999995 6666667789999999998887776655555


Q ss_pred             cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                      +.++++.+++.++.++..++                                       +.+    +   .++++++   
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~----~---~~~~~~~---  200 (379)
T TIGR00881       170 LLRDSPQSCGLPPAEEMPNE---------------------------------------EPD----G---DAEKKEE---  200 (379)
T ss_pred             eeCCCccccccCccccCccc---------------------------------------ccc----c---ccccccc---
Confidence            54433221100000000000                                       000    0   0000000   


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVIL  320 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~  320 (461)
                         +.+..+..     ....+|+|.+|.+.+..++.......+..+.|.|+ ++.|+++.+.+...+...++.++++++.
T Consensus       201 ---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  272 (379)
T TIGR00881       201 ---ELTKKQIF-----LQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLA  272 (379)
T ss_pred             ---cccchHHH-----HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHH
Confidence               00000111     12457889999888888888888888888999998 6679999999999999999999999999


Q ss_pred             hhccCCCCcchhHHH-HHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069        321 GYISDRPCVNRLYIY-NGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL  397 (461)
Q Consensus       321 g~l~dr~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  397 (461)
                      |++.||...+++... ........+.+.....  ..+.+...+..++.|++.....+....+..|.+|+++|+++.|+.+
T Consensus       273 g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  352 (379)
T TIGR00881       273 GWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVG  352 (379)
T ss_pred             HHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHH
Confidence            999997533333322 2222222222222222  2244445555666776655556666778899999999999999999


Q ss_pred             HHHHhhhhhccceeeeeecccCCchHH
Q psy15069        398 LFQGIASLVGPPIAGFLYDSTLSYSPA  424 (461)
Q Consensus       398 ~~~~~g~~~gp~i~g~l~~~~g~~~~~  424 (461)
                      ....+|+.++|.+.|.+.|+.| |+..
T Consensus       353 ~~~~~g~~~~~~~~g~l~~~~g-~~~~  378 (379)
T TIGR00881       353 FFAYLGGILAGLPLGYLADGFG-WAGA  378 (379)
T ss_pred             HhhhhhhhhhhhhHHHHHHhhc-cccc
Confidence            9999999999999999999875 7654

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=100.00  E-value=5.2e-35  Score=294.46  Aligned_cols=366  Identities=14%  Similarity=0.111  Sum_probs=270.4

Q ss_pred             HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc--cchhhHHHHhhcccccccccc
Q psy15069         17 VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA--KNVITLCITIGFGTGLGFGLI   94 (461)
Q Consensus        17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~--~~~~~l~i~~~~l~G~g~~~~   94 (461)
                      |++++..+.|++.+.+.+++.+++++.|++.||+|+|+++..+.++++++.+++.++  .+++.+++ .|+++|++.+..
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~~~G~~~~~~  148 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVF-CRVIQGLAQGSV  148 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHH-HHHHHHHhcccc
Confidence            789999999999999999999999999999999999999999999999998886543  56777776 599999999999


Q ss_pred             chhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15069         95 YLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLFGILLRPLEEQPVEE  172 (461)
Q Consensus        95 ~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~  172 (461)
                      ++....++.+|+| ++|++++++..++..+|.+++|++.+.+.+.+ |||++|++.++.+++..++.+++.+++|  +++
T Consensus       149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p--~~~  226 (465)
T TIGR00894       149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP--SIH  226 (465)
T ss_pred             hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc--ccC
Confidence            9999999999996 89999999999999999999999999999884 9999999999988777666555544322  211


Q ss_pred             cccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhh
Q psy15069        173 PVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQT  252 (461)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (461)
                      +.. +..            |.+...+.                                .+++++        +.+.+..
T Consensus       227 ~~~-~~~------------~~~~i~~~--------------------------------~~~~~~--------~~~~~~~  253 (465)
T TIGR00894       227 PCI-SKF------------EKKYINSS--------------------------------LQGQKG--------STRQSLP  253 (465)
T ss_pred             CCC-CHH------------HHHHHHhh--------------------------------cccccC--------CCCCCCC
Confidence            100 000            00000000                                000000        0000011


Q ss_pred             HhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcch
Q psy15069        253 LREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNR  331 (461)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~  331 (461)
                      .     ++++++|.+|...+..++.+...+.+..|+|.|+ +.+|.+..+.++..+...++.+++.++.|+++||.++++
T Consensus       254 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~  328 (465)
T TIGR00894       254 I-----KAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK  328 (465)
T ss_pred             H-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            1     2468899999999999999999999999999999 668999999999999999999999999999999854332


Q ss_pred             h--------HHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHh
Q psy15069        332 L--------YIYNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGI  402 (461)
Q Consensus       332 ~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  402 (461)
                      .        .....+....++..+.... ..+.+..++..++.+.+.+...+.......+..| +.+|.+.|+.+..+.+
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l  407 (465)
T TIGR00894       329 TLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFI  407 (465)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHH
Confidence            1        1111111111222222222 2234444444555555555555555555667776 5899999999999999


Q ss_pred             hhhhccceeeeeeccc--CCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        403 ASLVGPPIAGFLYDST--LSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       403 g~~~gp~i~g~l~~~~--g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      +++++|.+.|.+.|..  ++|...|.+.++..+++.++.....+
T Consensus       408 ~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~  451 (465)
T TIGR00894       408 GGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS  451 (465)
T ss_pred             HHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence            9999999999999864  45889999998888888776655433

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=100.00  E-value=4.8e-34  Score=288.74  Aligned_cols=375  Identities=14%  Similarity=0.145  Sum_probs=256.9

Q ss_pred             eeeeehHHHHhHhcCCCcc-HHH-----HHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhh-
Q psy15069          6 SFGILFIEFTKVFQEGDGV-TSW-----IASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVIT-   78 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~-~~~-----~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~-   78 (461)
                      .++...|.+.++++.+... .++     ++++..+++.+++++.|++.||+|||+++..+.++++++.+++++++|++. 
T Consensus        34 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~  113 (490)
T PRK10642         34 VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATI  113 (490)
T ss_pred             HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence            3567788899998755433 233     257778899999999999999999999999999999999999999999875 


Q ss_pred             ------HHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--------HhhchhH
Q psy15069         79 ------LCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--------REYGWKI  143 (461)
Q Consensus        79 ------l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~~gw~~  143 (461)
                            +++..|+++|+|.|..++....++.+|+| |+||++.++...+..+|.++++.+...+.        ..+|||+
T Consensus       114 g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~  193 (490)
T PRK10642        114 GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRI  193 (490)
T ss_pred             HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHH
Confidence                  23346999999999999999999999995 88999999999888888888876665443        2579999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcccc
Q psy15069        144 TLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQ  223 (461)
Q Consensus       144 ~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (461)
                      +|++.+++.++..++ ....|+  +|++++.+++..+                  .                       +
T Consensus       194 ~f~i~~~~~l~~~~~-~~~~~e--sp~~~~~~~~~~~------------------~-----------------------~  229 (490)
T PRK10642        194 PFFIALPLGIIGLYL-RHALEE--TPAFQQHVDKLEQ------------------G-----------------------D  229 (490)
T ss_pred             HHHHHHHHHHHHHHH-HHcCCC--ChhHHHHHHhhhh------------------h-----------------------c
Confidence            999876555433322 222222  2321100000000                  0                       0


Q ss_pred             ccccCCCCCCCCcccccccccCCchhhhhHhhhhcccccc-chhHHH-HHHHHHHHhhccccchhhHhhHH-HHhCCCch
Q psy15069        224 IDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLR-DPIFIL-FTISNIFTSIGFNVPYVYIVKLA-EQRGVTRS  300 (461)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~  300 (461)
                               +++..         +..+.+..+     +++ +++.+. .....++....++.+..|+|.|+ ++.|++..
T Consensus       230 ---------~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  286 (490)
T PRK10642        230 ---------REGLQ---------DGPKVSFKE-----IATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSED  286 (490)
T ss_pred             ---------ccccc---------ccccCCHHH-----HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence                     00000         000011111     121 222222 22333445667788889999999 56799988


Q ss_pred             hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH-HHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy15069        301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL-AICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVI  379 (461)
Q Consensus       301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~  379 (461)
                      +.++......++.+++.++.|+++||+|+|+........ .+.++..+.....++...+++..++.|++.+...+....+
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  366 (490)
T PRK10642        287 HGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMAST  366 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888888899999999999999998766543322111 1111211222223345555666677777777666777778


Q ss_pred             HHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069        380 LVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS  447 (461)
Q Consensus       380 ~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~  447 (461)
                      +.+.+|++.|+++.|+.+....+++.++|.+.|++.+..++|...+++..+..+++.+..+++++.++
T Consensus       367 ~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~  434 (490)
T PRK10642        367 LPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETAN  434 (490)
T ss_pred             HHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccC
Confidence            88999999999999986666777788999999999987777776666666666666666666665544

>PRK10489 enterobactin exporter EntS; Provisional

Probab=100.00  E-value=3.3e-33  Score=277.46  Aligned_cols=359  Identities=12%  Similarity=0.083  Sum_probs=270.1

Q ss_pred             eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhc-----ccchhhHHHH
Q psy15069          8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVF-----AKNVITLCIT   82 (461)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~-----~~~~~~l~i~   82 (461)
                      .+..|.+.++++.+..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++.++     .++++.+++ 
T Consensus        37 ~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-  115 (417)
T PRK10489         37 GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYL-  115 (417)
T ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHH-
Confidence            35678889999999999999999999999999999999999999999999998888887765432     567777776 


Q ss_pred             hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL  161 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~  161 (461)
                      .|++.|++.+...++..+.+.+++| ++|++++++...+.++|..++|++++.+.+..||++.|++.++..++..++.+.
T Consensus       116 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (417)
T PRK10489        116 LGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR  195 (417)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence            4899999988877888888889884 778999999999999999999999999999899999999887776665544433


Q ss_pred             cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                      . |+.+.++  +++                                                          +++     
T Consensus       196 l-~~~~~~~--~~~----------------------------------------------------------~~~-----  209 (417)
T PRK10489        196 L-PALPPPP--QPR----------------------------------------------------------EHP-----  209 (417)
T ss_pred             C-CCCCCCC--ccc----------------------------------------------------------ccc-----
Confidence            3 3221110  000                                                          000     


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVIL  320 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~  320 (461)
                          .++.++..+     ..+++|.++...+..++... ...+..+.|.|.++ .|.++.+.+++.+...++.+++.++.
T Consensus       210 ----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~  279 (417)
T PRK10489        210 ----LRSLLAGFR-----FLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTS  279 (417)
T ss_pred             ----hHHHHHHHH-----HHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHH
Confidence                000111111     24677776655544443332 34566788999966 89999999999999999999999999


Q ss_pred             hhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069        321 GYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ  400 (461)
Q Consensus       321 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  400 (461)
                      +++.||.+  ++..+..+.++.++..+++.+.++.+...+..+++|++.+...+...+++.+..|++.||++.|+.+...
T Consensus       280 ~~l~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~  357 (417)
T PRK10489        280 GWLAHSAR--PGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQN  357 (417)
T ss_pred             HHhhhccC--cchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            99999843  3222334444555555555566677667777888898888777888888999999999999999999999


Q ss_pred             HhhhhhccceeeeeecccCCchHHHHHHhHHHHHH-HHHHHHHHHhh
Q psy15069        401 GIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVS-GVMLFVIPSLQ  446 (461)
Q Consensus       401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~-~~~~~~~~~~~  446 (461)
                      .+|..+||.+.|++.|..| +...++..+++.++. .+....+++.+
T Consensus       358 ~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (417)
T PRK10489        358 VTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVLGELR  403 (417)
T ss_pred             hhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhccccc
Confidence            9999999999999999876 666666666555544 44444444433

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=100.00  E-value=2.2e-33  Score=280.28  Aligned_cols=381  Identities=15%  Similarity=0.148  Sum_probs=268.5

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc----cchhhHHH
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA----KNVITLCI   81 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~----~~~~~l~i   81 (461)
                      .++...|.+++ +|.++++.+++.+++.++..+++++.|++.||+|||+++..+.++.+++.++.++.    ++++.+++
T Consensus        45 ~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  123 (438)
T TIGR00712        45 NFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFV  123 (438)
T ss_pred             cHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHH
Confidence            34556676665 69999999999999999999999999999999999999999999999998887664    45666665


Q ss_pred             HhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH-hhchhHHHHHHHHHHHHHHHHH
Q psy15069         82 TIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR-EYGWKITLLVLSVTVLSAVLFG  159 (461)
Q Consensus        82 ~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-~~gw~~~f~i~~~~~l~~~i~~  159 (461)
                       .|++.|++.+..+++....+.+++| |+|++++++.+++.++|..+++++.+...+ ..|||+.|++.++++++..+..
T Consensus       124 -~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~  202 (438)
T TIGR00712       124 -LLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFA  202 (438)
T ss_pred             -HHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence             4899999999888888888899995 789999999999999999999998887555 4699999999999888766655


Q ss_pred             hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                      +++.++++...+ .++.+..+      +|.                             +++.        .+++++   
T Consensus       203 ~~~~~~~~~~~~-~~~~~~~~------~~~-----------------------------~~~~--------~~~~~~---  235 (438)
T TIGR00712       203 FAMMRDTPQSCG-LPPIEEYR------NDY-----------------------------PDDY--------NEKAEQ---  235 (438)
T ss_pred             HHhccCCHHhcC-CCCchhcc------ccc-----------------------------cccc--------cccccc---
Confidence            555444321110 00000000      000                             0000        000000   


Q ss_pred             cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhh
Q psy15069        240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRV  318 (461)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~  318 (461)
                            +.    +.++......+|++.+|...+..++.+...+....++|.|+++ .|+++.+.++......+.++++++
T Consensus       236 ------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~  305 (438)
T TIGR00712       236 ------EL----TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTL  305 (438)
T ss_pred             ------cc----chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHH
Confidence                  00    0111111236789999998888888777778888999999954 699999999999999999999999


Q ss_pred             hhhhccCCCCcchhHHHHHHHH-HHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069        319 ILGYISDRPCVNRLYIYNGCLA-ICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL  395 (461)
Q Consensus       319 ~~g~l~dr~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  395 (461)
                      +.|+++||++++++........ ...+..+.+..  ..+.+......++.|++.............|.+|+++|+++.|+
T Consensus       306 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~  385 (438)
T TIGR00712       306 LCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF  385 (438)
T ss_pred             HHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhh
Confidence            9999999975444333221111 11111121111  12333333344455544322222223457799999999999999


Q ss_pred             HHHHHHhhh-hhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069        396 LLLFQGIAS-LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       396 ~~~~~~~g~-~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~  446 (461)
                      .+....+++ ++||.+.|.+.|+.| |+..|++..++.+++.+..+.+.+.+
T Consensus       386 ~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~  436 (438)
T TIGR00712       386 TGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGE  436 (438)
T ss_pred             hchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999888875 689999999999876 99999888887777776665544433

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK12307 putative sialic acid transporter; Provisional

Probab=100.00  E-value=6.2e-34  Score=283.57  Aligned_cols=347  Identities=17%  Similarity=0.148  Sum_probs=247.1

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      .+...|.+++++|.|+.+.+++.+++.+++.+++++.|++.||+|||+++..+.++.+++.++++++++++.+++. |++
T Consensus        37 ~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l  115 (426)
T PRK12307         37 IFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLS-RFI  115 (426)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHH
Confidence            3456788999999999999999999999999999999999999999999999999999999999999999999985 999


Q ss_pred             ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      .|++.+..++....++.+++| |+|++++++...+.++|.++++.+...+.+.+|||++|++.....++ .+  ++..+.
T Consensus       116 ~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~--~~~~~~  192 (426)
T PRK12307        116 VGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VI--YIRARA  192 (426)
T ss_pred             HHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HH--HHHHHC
Confidence            999999989988888999985 77999999999999999999999999998889999999874433222 11  111111


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      ++++++++++.+                     .                     ++         +++++ +       
T Consensus       193 p~~~~~~~~~~~---------------------~---------------------~~---------~~~~~-~-------  213 (426)
T PRK12307        193 PESKEWEEAKLS---------------------G---------------------KG---------KHSQS-A-------  213 (426)
T ss_pred             CCChHHHHhhhh---------------------c---------------------cc---------ccccc-c-------
Confidence            111110000000                     0                     00         00000 0       


Q ss_pred             CchhhhhHhhhhccccccchhHHHHHHH---HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069        246 SDDTKQTLREMLDMELLRDPIFILFTIS---NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGY  322 (461)
Q Consensus       246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~  322 (461)
                      ....+...     ++.+|+|.++...+.   .++.....+.+..++|.|+++.|.++.+.+.+.+...++.++++++.|+
T Consensus       214 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~  288 (426)
T PRK12307        214 WSVFSLSM-----KGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGL  288 (426)
T ss_pred             hhhhhHHH-----HHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00000111     134666666543322   2223333445677899999888999999999999999999999999999


Q ss_pred             ccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069        323 ISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAM--IGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ  400 (461)
Q Consensus       323 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  400 (461)
                      +.||+++++...  .+.++..+..+.....++.....+..+++|++  .....+..+.++.|.+|+++++++.|+.+...
T Consensus       289 l~dr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~  366 (426)
T PRK12307        289 CADRIGLKKTFS--IGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLA  366 (426)
T ss_pred             HHHHhccHHHHH--HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHH
Confidence            999976554433  33333333333222222111122222333332  22334566677899999999999999999999


Q ss_pred             HhhhhhccceeeeeecccCCchHH
Q psy15069        401 GIASLVGPPIAGFLYDSTLSYSPA  424 (461)
Q Consensus       401 ~~g~~~gp~i~g~l~~~~g~~~~~  424 (461)
                      .+++.++|.+.|++.|+.| +...
T Consensus       367 ~~~~~~gp~~~g~l~~~~g-~~~~  389 (426)
T PRK12307        367 ATSGTFNSMAATWLGITMG-LGAA  389 (426)
T ss_pred             hHHHHHHHHHHHHHHHccc-HHHH
Confidence            9999999999999999875 5443

>TIGR00896 CynX cyanate transporter

Probab=100.00  E-value=2.6e-33  Score=272.26  Aligned_cols=336  Identities=15%  Similarity=0.116  Sum_probs=260.5

Q ss_pred             ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069          4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI   83 (461)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~   83 (461)
                      ..+++.++|++++++|.|..+.|++.+++.+++.+++++.|++.||+|+|+++..+.++..++.+.+ .+++++.+++ .
T Consensus        16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~-~   93 (355)
T TIGR00896        16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFA-G   93 (355)
T ss_pred             cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHH-H
Confidence            3578899999999999999999999999999999999999999999999999999999988888877 7788888876 4


Q ss_pred             hccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhh--chhHHHHHHHHHHHHHHHHHhh
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY--GWKITLLVLSVTVLSAVLFGIL  161 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~--gw~~~f~i~~~~~l~~~i~~~~  161 (461)
                      |++.|+|.+...+.....+.++++++|++++++...+.++|..+++++.+.+.+..  +||+.|.+.++..++....   
T Consensus        94 ~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~---  170 (355)
T TIGR00896        94 TALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA---  170 (355)
T ss_pred             HHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH---
Confidence            89999999887777777888999999999999999999999999999999888765  3999998877655443221   


Q ss_pred             cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                      +.|+.+.+++ +++                                                          +.      
T Consensus       171 ~~~~~~~~~~-~~~----------------------------------------------------------~~------  185 (355)
T TIGR00896       171 WIPQVRRRVA-ANQ----------------------------------------------------------TT------  185 (355)
T ss_pred             HhhhhccccC-CCC----------------------------------------------------------CC------
Confidence            2222111100 000                                                          00      


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILG  321 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g  321 (461)
                           .  +.     ..++.+|+|.+|.+.+..++....++....++|.|+++.|.+..+.+.+.+...++.++++++.|
T Consensus       186 -----~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g  253 (355)
T TIGR00896       186 -----T--RL-----TPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIP  253 (355)
T ss_pred             -----C--CC-----CCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHH
Confidence                 0  00     01235788888877777777777777888899999988999999999999999999999999999


Q ss_pred             hccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHH
Q psy15069        322 YISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQ  400 (461)
Q Consensus       322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~  400 (461)
                      ++.||++.+|..+ ..+..+.+++...+.+.++.... ...+++|++.+..++.....+.+..+ ++++++..++.+...
T Consensus       254 ~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  331 (355)
T TIGR00896       254 ALARRVKDQRGIV-AVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIG  331 (355)
T ss_pred             HHHhhhccchHHH-HHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence            9999974444332 23344444444444443332222 24567899999888887776665554 567789999999999


Q ss_pred             HhhhhhccceeeeeecccCCchH
Q psy15069        401 GIASLVGPPIAGFLYDSTLSYSP  423 (461)
Q Consensus       401 ~~g~~~gp~i~g~l~~~~g~~~~  423 (461)
                      +++.+++|.+.|++.|++|+|.+
T Consensus       332 ~~~~~~gp~~~G~l~~~~g~~~~  354 (355)
T TIGR00896       332 YLLAALGPLFVGVLHDISGNWLM  354 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCC
Confidence            99999999999999999988764

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>TIGR00897 2A0118 polyol permease family

Probab=100.00  E-value=1e-32  Score=272.34  Aligned_cols=356  Identities=17%  Similarity=0.145  Sum_probs=263.6

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hcc-cchhhHHHHhhc
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFA-KNVITLCITIGF   85 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~-~~~~~l~i~~~~   85 (461)
                      +.|++.+|+|.++++.|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.+++   ++. ++++.+++ .|+
T Consensus        35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  113 (402)
T TIGR00897        35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILL-FYG  113 (402)
T ss_pred             hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHH-HHH
Confidence            5677889999999999999999999999999999999999999999999999999887654   343 56777776 489


Q ss_pred             cccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhH-HHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGT-IIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~-~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      +.|+|.+...+.....+.+++ +|+|++++|+.+++.++|. +++|++++.+.+.+||+..++......++..+...++.
T Consensus       114 i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  193 (402)
T TIGR00897       114 IRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSN  193 (402)
T ss_pred             HHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhcc
Confidence            999998877766666666766 6899999999999999996 57899999988888977665544443333333333333


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      ++++.++++++                                                           +++       
T Consensus       194 ~~~~~~~~~~~-----------------------------------------------------------~~~-------  207 (402)
T TIGR00897       194 KDIFTPQHMQT-----------------------------------------------------------REK-------  207 (402)
T ss_pred             CCCCCcccccC-----------------------------------------------------------Ccc-------
Confidence            32211110000                                                           000       


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                        .++.++..+     .++|+|.++...+..++.....+.+.++.|.|+++.|++..+.+.+.+...++.++++++.|++
T Consensus       208 --~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l  280 (402)
T TIGR00897       208 --FSELGKAAT-----ILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIV  280 (402)
T ss_pred             --hhhHHHHHH-----HHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence              000011111     3678999998888888888888888999999998899999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHH---HHHhh--hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069        324 SDRPCVNRLYIYNGCLAICGAA---TVICA--FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL  398 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  398 (461)
                      +||+++++.... .+.+..++.   +...+  ..++.+..++..++.|++.+...+. ...+.+..| ++|++++|+.+.
T Consensus       281 ~dr~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~  357 (402)
T TIGR00897       281 GDKLGWMNTVRW-FGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNL  357 (402)
T ss_pred             HHhhcchhHHHH-HHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHH
Confidence            999875554321 222222222   21111  1234556666778888887766554 345566654 689999999999


Q ss_pred             HHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        399 FQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       399 ~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      ...+|+.++|.+.|.+.|..| |...+++.+++.+++.++..+++
T Consensus       358 ~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~~~~~~~~  401 (402)
T TIGR00897       358 SAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSAFLTAFIR  401 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999886 88888888888887777665543

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=100.00  E-value=1.7e-33  Score=278.11  Aligned_cols=367  Identities=16%  Similarity=0.205  Sum_probs=261.2

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      .++.+.|++++++|.+..+.+++.+++.++..+++++.|.+.||+|||+++..+.++.+++.++++++++++.+++. |+
T Consensus        30 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~  108 (405)
T TIGR00891        30 LVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIA-RL  108 (405)
T ss_pred             HHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HH
Confidence            45677899999999999999999999999999999999999999999999999999999999999999999999885 89


Q ss_pred             cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc--hhHHHHHHHHHHHHHHHHHhhc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG--WKITLLVLSVTVLSAVLFGILL  162 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g--w~~~f~i~~~~~l~~~i~~~~~  162 (461)
                      +.|++.+..++.....+.+++| ++|++++++.+++.++|.++++.+.+.+.+..|  ||+.|++.++..++..+. ...
T Consensus       109 l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~-~~~  187 (405)
T TIGR00891       109 VIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWL-RKN  187 (405)
T ss_pred             HHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHH-HHh
Confidence            9999999999999899999985 889999999999999999999999999988776  999998765554443322 222


Q ss_pred             ccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069        163 RPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC  242 (461)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (461)
                      .|+++..++ +++++   ++      ..++.++.                              .+     +++..+.  
T Consensus       188 ~~~~~~~~~-~~~~~---~~------~~~~~~~~------------------------------~~-----~~~~~~~--  220 (405)
T TIGR00891       188 IPEAEDWKE-KHAGK---AL------VRTMVDIL------------------------------YG-----GEHRIAN--  220 (405)
T ss_pred             CCCChhHHH-Hhhhh---hh------hhhHHHHH------------------------------hc-----cchhhhh--
Confidence            232211110 00000   00      00000000                              00     0000000  


Q ss_pred             ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069        243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILG  321 (461)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g  321 (461)
                        ..++.....++   ....+.+.+..+.+...+.+........++|.|+ ++.|++..+.+.+.+...++.++++++.|
T Consensus       221 --~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g  295 (405)
T TIGR00891       221 --IVMTLAAAMVQ---SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFG  295 (405)
T ss_pred             --hhhhhhHHhhh---hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence              00000000000   0001111233333333444444556667889888 67899999999999999999999999999


Q ss_pred             hccCCCCcchhHHHHHHHHHHHHH-HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069        322 YISDRPCVNRLYIYNGCLAICGAA-TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ  400 (461)
Q Consensus       322 ~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  400 (461)
                      ++.||+++++...  .+....++. .......++.+.+.+..++.+++.+...+..+.++.|.+|+++|+++.|+.+...
T Consensus       296 ~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  373 (405)
T TIGR00891       296 FLGDWLGRRKAYV--CSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLG  373 (405)
T ss_pred             HHHHHhCchhhhH--HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHH
Confidence            9999976555433  233332222 2222233455555555566777766677778888999999999999999999999


Q ss_pred             HhhhhhccceeeeeecccCCchHHHHHH
Q psy15069        401 GIASLVGPPIAGFLYDSTLSYSPAFFLA  428 (461)
Q Consensus       401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~  428 (461)
                      .+|..++|++.|.+.|+.|+|+..+...
T Consensus       374 ~~g~~~g~~~~g~l~~~~g~~~~~~~~~  401 (405)
T TIGR00891       374 NLGGALAPIIGALLAQRLDEYGTALASL  401 (405)
T ss_pred             HHHHHHHHHHHHHHHHhccccchhHHhh
Confidence            9999999999999999998888776553

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=100.00  E-value=8.4e-33  Score=272.41  Aligned_cols=349  Identities=14%  Similarity=0.133  Sum_probs=266.9

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      ++++.+++++++|.|..++|++.++..+...+.+++.|++.||+|||+++..+.++..++.+++.+++++|.+++. |++
T Consensus        30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l  108 (400)
T PRK11646         30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLS-CIL  108 (400)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHH
Confidence            3444556788999999999999999999999999999999999999999999999999999999999999998875 899


Q ss_pred             ccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         87 TGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      .|++.+...++..+.+.+++ +++|++++|+.....++|..++|++++.+. .+|||+.|++.++.+++..++..+..|+
T Consensus       109 ~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~  187 (400)
T PRK11646        109 SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA  187 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999888888888889988 589999999999999999999999999998 7899999999888877665554444432


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      ++ ++  +.+                                                                      
T Consensus       188 ~~-~~--~~~----------------------------------------------------------------------  194 (400)
T PRK11646        188 YK-LS--TVR----------------------------------------------------------------------  194 (400)
T ss_pred             cc-cc--ccc----------------------------------------------------------------------
Confidence            11 00  000                                                                      


Q ss_pred             CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069        246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD  325 (461)
Q Consensus       246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d  325 (461)
                       ++.++..+     +.+++|.++...+..+...........++|.|+++.+.++.+.+++.+..++....+....+++.|
T Consensus       195 -~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~  268 (400)
T PRK11646        195 -TPVREGMT-----RVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSE  268 (400)
T ss_pred             -hhhHHHHH-----HHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             00001111     346778777655554443333333456789998777668888999888888777766666667776


Q ss_pred             C-CCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhh
Q psy15069        326 R-PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIAS  404 (461)
Q Consensus       326 r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  404 (461)
                      | ++.++.  +..++.+.++..+++.+.++.+.+.+..++++++.+...|...+++.+..|++++|+++|+.+...++|.
T Consensus       269 ~r~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~  346 (400)
T PRK11646        269 KRFRLEHR--LMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGG  346 (400)
T ss_pred             HhcchhHH--HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHH
Confidence            5 322332  2345555556665666667776666667788888888888888999999999999999999999999999


Q ss_pred             hhccceeeeeecccCC---chHHHHHHhHHHHHHHHH
Q psy15069        405 LVGPPIAGFLYDSTLS---YSPAFFLAGGAIFVSGVM  438 (461)
Q Consensus       405 ~~gp~i~g~l~~~~g~---~~~~f~~~~~~~l~~~~~  438 (461)
                      .+||.++|++.|+.++   ....+...+++.+++.+.
T Consensus       347 ~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (400)
T PRK11646        347 AIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA  383 (400)
T ss_pred             HhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence            9999999999998643   345666555555555444

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=100.00  E-value=1.7e-32  Score=271.34  Aligned_cols=338  Identities=11%  Similarity=0.028  Sum_probs=261.4

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      +...+|.+++++|.|..+.++..+.+.+++.+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |++
T Consensus        32 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l  110 (406)
T PRK15402         32 IQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLL-RFL  110 (406)
T ss_pred             HhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HHH
Confidence            3356788999999999999999999999999999999999999999999999999999999999999999998875 899


Q ss_pred             ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      .|++.+...+.....+.+++| ++|.+++++......+|..++|++++.+.+..|||+.|++.++++++..+..++..|+
T Consensus       111 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~  190 (406)
T PRK15402        111 QGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPE  190 (406)
T ss_pred             HHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999998888888888899995 6788889999888889999999999999998999999999888887766555444443


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      ++.+++  +                                                           +++         
T Consensus       191 ~~~~~~--~-----------------------------------------------------------~~~---------  200 (406)
T PRK15402        191 TAGRVG--E-----------------------------------------------------------KLS---------  200 (406)
T ss_pred             CCcccc--c-----------------------------------------------------------ccc---------
Confidence            211100  0                                                           000         


Q ss_pred             CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069        246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYIS  324 (461)
Q Consensus       246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~  324 (461)
                      .++.+...     +.++++|.++...+..++..........+.|.++ ++.|.++.+.++......++.++++++.|++.
T Consensus       201 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~  275 (406)
T PRK15402        201 LKELGRDY-----KLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLT  275 (406)
T ss_pred             HHHHHHHH-----HHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00011111     2467889888877777766666666667788887 67899999999888888888999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069        325 DRPCVNRLYIYNGCLAICGAATVICAF-----CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF  399 (461)
Q Consensus       325 dr~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  399 (461)
                      ||+++++...  .+.++..++..+...     ..+.+++.+..+++|++.+...+......... +++++|++.+..+..
T Consensus       276 ~r~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~  352 (406)
T PRK15402        276 SRRPLRSLIR--MGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGML  352 (406)
T ss_pred             HhcCHHHHHH--HHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHH
Confidence            9975544333  333333333333222     23455666777888888887776665555444 448899999999999


Q ss_pred             HHhhhhhccceeeeeecccCCchH
Q psy15069        400 QGIASLVGPPIAGFLYDSTLSYSP  423 (461)
Q Consensus       400 ~~~g~~~gp~i~g~l~~~~g~~~~  423 (461)
                      ..++..+|+.+.+++++..+.+..
T Consensus       353 ~~~~~~~g~~~~~~l~~~~~~~~~  376 (406)
T PRK15402        353 SMLIFTVGIELSKHAYLGGGNGLF  376 (406)
T ss_pred             HHHHHHHHHHHHHhcccCCchHHH
Confidence            999999999999999998774443

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=100.00  E-value=2.1e-33  Score=290.09  Aligned_cols=416  Identities=13%  Similarity=0.119  Sum_probs=282.4

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      .+..+|.+.++++++..+.+++.+++.+++.+++++.|++.||+|||++++.++++.+++.++++++++++.+++. |++
T Consensus       186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~-R~l  264 (742)
T TIGR01299       186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFC-RLL  264 (742)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-HHH
Confidence            5667899999999999999999999999999999999999999999999999999999999999999999999985 999


Q ss_pred             ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh-------------chhHHHHHHHHHH
Q psy15069         87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-------------GWKITLLVLSVTV  152 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-------------gw~~~f~i~~~~~  152 (461)
                      .|+|.+...+...+++.+++| ++|++++++..++..+|.++++.++..+...+             +||+.+++.++.+
T Consensus       265 ~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~  344 (742)
T TIGR01299       265 SGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPC  344 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHH
Confidence            999999999999999999995 88999999999999999999999888776543             5888887776665


Q ss_pred             HHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCC--cc--cCCcccc--ccc
Q psy15069        153 LSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGP--TE--VISTQAQ--IDS  226 (461)
Q Consensus       153 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~--~~~  226 (461)
                      ++.+++ +++.|+  +|++...+            ..++|.....+.....+.+....+.+.  .+  +.+++.+  .+.
T Consensus       345 ll~ll~-~~~lPE--SPrwL~~~------------gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (742)
T TIGR01299       345 VFAIGA-LTFMPE--SPRFFLEN------------GKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEI  409 (742)
T ss_pred             HHHHHH-HHHcCC--CHHHHHHC------------CCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcc
Confidence            554433 344443  33321000            000000000000000000000000000  00  0000000  000


Q ss_pred             cCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh-----------
Q psy15069        227 KATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR-----------  295 (461)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  295 (461)
                      .+. +....++............+....+.+.++..  +..+++++..++..+++|++..|+|.++++.           
T Consensus       410 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~--~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~  486 (742)
T TIGR01299       410 ESD-TGTWYQRCFVRALSEGGGIWGNFLRCFNPEVR--EITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKN  486 (742)
T ss_pred             ccc-ccchhhcchhhhhhhhhhHHHHHHHHcCccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            000 00000000000000000111123333332221  2346677778888999999999999886331           


Q ss_pred             -------------------------------CC-----C---------------c-------------------------
Q psy15069        296 -------------------------------GV-----T---------------R-------------------------  299 (461)
Q Consensus       296 -------------------------------g~-----s---------------~-------------------------  299 (461)
                                                     |+     +               .                         
T Consensus       487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~  566 (742)
T TIGR01299       487 FPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKF  566 (742)
T ss_pred             ccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhh
Confidence                                           00     0               0                         


Q ss_pred             ----------------------------hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh
Q psy15069        300 ----------------------------SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF  351 (461)
Q Consensus       300 ----------------------------~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~  351 (461)
                                                  ........+..++.+++.++.|+++||+|+|+.  +..++++.+++.+++.+
T Consensus       567 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~--l~~~~~lsai~~ll~~~  644 (742)
T TIGR01299       567 IDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRM--LAGSMVLSCISCFFLSF  644 (742)
T ss_pred             hhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHHHHHHHHHH
Confidence                                        012333556678899999999999999765544  44667777777777777


Q ss_pred             hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHH
Q psy15069        352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA  431 (461)
Q Consensus       352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~  431 (461)
                      .++.+.++++.+++|++.++..+...++++|++|++.|++++|+.+....+|.++||+++|.+.+.  +...+|++.+++
T Consensus       645 ~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~  722 (742)
T TIGR01299       645 GNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAA  722 (742)
T ss_pred             HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHH
Confidence            777667777777888888888888999999999999999999999999999999999999998875  367788888888


Q ss_pred             HHHHHHHHHHHHHh
Q psy15069        432 IFVSGVMLFVIPSL  445 (461)
Q Consensus       432 ~l~~~~~~~~~~~~  445 (461)
                      .++++++.+++|+.
T Consensus       723 lll~~ll~~~LPET  736 (742)
T TIGR01299       723 LACGGLLALKLPDT  736 (742)
T ss_pred             HHHHHHHHHhCCCC
Confidence            88877777666543

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>TIGR00900 2A0121 H+ Antiporter protein

Probab=100.00  E-value=7.8e-33  Score=269.37  Aligned_cols=338  Identities=14%  Similarity=0.140  Sum_probs=269.8

Q ss_pred             eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc-----chhhHHHH
Q psy15069          8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK-----NVITLCIT   82 (461)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~-----~~~~l~i~   82 (461)
                      .+.+|.+.++++.+..++|++.+++.++..+++++.|.+.||+|||+++..+.++.+++.++..+.+     +++.+++.
T Consensus        19 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (365)
T TIGR00900        19 QVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVL   98 (365)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence            3567889999999999999999999999999999999999999999999999999999888887777     89998885


Q ss_pred             hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL  161 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~  161 (461)
                       |++.|++.+...++..+++.+++| ++|++++++...+.++|.+++|++++.+.+..|||+.|++.++..++..++.++
T Consensus        99 -~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  177 (365)
T TIGR00900        99 -AGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS  177 (365)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence             899999999999999999999995 789999999999999999999999999999999999999888776655544444


Q ss_pred             cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                      .++++ .+++++++                                                         .+++.    
T Consensus       178 ~~~~~-~~~~~~~~---------------------------------------------------------~~~~~----  195 (365)
T TIGR00900       178 VRIPE-LAASEIQA---------------------------------------------------------LSNAV----  195 (365)
T ss_pred             ccccc-CCCccccc---------------------------------------------------------cchhH----
Confidence            33221 11100000                                                         00000    


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccch-hhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPY-VYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVI  319 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~  319 (461)
                          .++.++..+     ..+|+|.++...+..++......... .+.|.+.++ .|.+..+.+.+.+...++.++++++
T Consensus       196 ----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (365)
T TIGR00900       196 ----LRDTREGIK-----FVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALL  266 (365)
T ss_pred             ----HHHHHhHHH-----HHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Confidence                000111111     35678888877777776666665555 788888854 8999999999999999999999999


Q ss_pred             hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh-HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069        320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN-YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL  398 (461)
Q Consensus       320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  398 (461)
                      .+++.||.++++  ....+..+.++..+...+.++ .+...+..++.|++.+...+....++.|.+|+++|+++.|+.+.
T Consensus       267 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  344 (365)
T TIGR00900       267 LGLLGRYFKRMA--LMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFS  344 (365)
T ss_pred             HHHHHHHhchhH--HHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            999999964433  333445555555555555553 77777788899999999999999999999999999999999999


Q ss_pred             HHHhhhhhccceeeeeecccC
Q psy15069        399 FQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       399 ~~~~g~~~gp~i~g~l~~~~g  419 (461)
                      ...++..++|.+.|.+.|..|
T Consensus       345 ~~~~~~~~g~~~~g~l~~~~g  365 (365)
T TIGR00900       345 LSHAAWPLGLILAGPLADHLG  365 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999998754

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=100.00  E-value=1.4e-32  Score=273.85  Aligned_cols=354  Identities=13%  Similarity=0.104  Sum_probs=245.2

Q ss_pred             eeeeehHHHHhHhc---CCCccHHH---HHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchh--
Q psy15069          6 SFGILFIEFTKVFQ---EGDGVTSW---IASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVI--   77 (461)
Q Consensus         6 ~~~~~~~~~~~~~~---~~~~~~~~---~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~--   77 (461)
                      .+++..|.+.++++   .+..+.+.   +++...++..+++++.|++.||+|||+++..+.++++++.+++++++++.  
T Consensus        40 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~  119 (432)
T PRK10406         40 VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETI  119 (432)
T ss_pred             HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhH
Confidence            36778899999985   45554444   44444555569999999999999999999999999999999999998875  


Q ss_pred             ------hHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--------Hhhchh
Q psy15069         78 ------TLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--------REYGWK  142 (461)
Q Consensus        78 ------~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~~gw~  142 (461)
                            .+++ .|+++|+|.|..++...+++.|++| |+|+++.++.+.+...|.++++.+...+.        +.+|||
T Consensus       120 ~~~~~~~l~~-~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr  198 (432)
T PRK10406        120 GTWAPALLLL-ARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWR  198 (432)
T ss_pred             HHHHHHHHHH-HHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchH
Confidence                  3555 5999999999999999999999995 88999999998888888888777655443        257999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccc
Q psy15069        143 ITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQA  222 (461)
Q Consensus       143 ~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (461)
                      ++|++.+++.++...+   .+..+|++++|++                                                
T Consensus       199 ~~F~i~~~~~ll~~~~---~~~~~e~~~~~~~------------------------------------------------  227 (432)
T PRK10406        199 IPFALGAVLAVVALWL---RRQLDETSQQETR------------------------------------------------  227 (432)
T ss_pred             HHHHHHHHHHHHHHHH---HhcCCCCchHHHh------------------------------------------------
Confidence            9999877766544321   1111211110000                                                


Q ss_pred             cccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHH-HhhccccchhhHhhHH-HHhCCCch
Q psy15069        223 QIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIF-TSIGFNVPYVYIVKLA-EQRGVTRS  300 (461)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~g~s~~  300 (461)
                                   ++         + .+.+.+     +++|+|+.+...+..++ ....++.+.+|+|.|+ ++.|.+..
T Consensus       228 -------------~~---------~-~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~  279 (432)
T PRK10406        228 -------------AL---------K-EAGSLK-----GLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHAN  279 (432)
T ss_pred             -------------hh---------c-ccccHH-----HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence                         00         0 001111     34677777776655544 3666778889999999 56899999


Q ss_pred             hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH--H--hhhhhhHHHHHHHHHHHhhhhhhHHHHH
Q psy15069        301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV--I--CAFCYNYVELAIYAGVFGAMIGAYVGLT  376 (461)
Q Consensus       301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~  376 (461)
                      +.+...++..+...++.++.|+++||+++|+....  ..++.++..+  .  ....++.+.......+.+++.+...+..
T Consensus       280 ~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (432)
T PRK10406        280 VASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLC--FGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSIS  357 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH--HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998888888889999999999999876654432  2222211111  1  1112222222222222333344445566


Q ss_pred             HHHHHHhcCccchhHHHHHHHHHHHh-hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        377 SVILVDLLGLDRLTNAFGLLLLFQGI-ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       377 ~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      +.+..|.+|+++|++++|+.+...++ ++...|.+.+. .+.+|+|...+++.+++.+++.+..+++
T Consensus       358 ~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~~i~~~~~~~l  423 (432)
T PRK10406        358 GILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMAVVAFLVSLML  423 (432)
T ss_pred             HHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence            77889999999999999999887664 34557888774 4666778877777777777766655543

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=100.00  E-value=2.5e-32  Score=269.68  Aligned_cols=344  Identities=16%  Similarity=0.117  Sum_probs=256.7

Q ss_pred             ehHH-HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc---c-----chhhHH
Q psy15069         10 LFIE-FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA---K-----NVITLC   80 (461)
Q Consensus        10 ~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~---~-----~~~~l~   80 (461)
                      ++|. +.+++|.|+.++|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+.+.++   +     +++.++
T Consensus        37 ~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  116 (399)
T PRK05122         37 VLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLL  116 (399)
T ss_pred             HHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Confidence            3454 678899999999999999999999999999999999999999999999888776654432   2     355666


Q ss_pred             HHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFG  159 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~  159 (461)
                      + .|+++|++.+...+....++.+++ +|+|++++++...+..+|.++++++++.+.+.+|||+.+++..++.++..+  
T Consensus       117 ~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--  193 (399)
T PRK05122        117 L-GRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLL--  193 (399)
T ss_pred             H-HHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH--
Confidence            6 599999999998888888888887 588999999999999999999999999999999999998876665443322  


Q ss_pred             hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                       +.++.++.+++   +                                                           ++   
T Consensus       194 -~~~~~~~~~~~---~-----------------------------------------------------------~~---  207 (399)
T PRK05122        194 -LARPRPAVPPV---K-----------------------------------------------------------GE---  207 (399)
T ss_pred             -HHhcCCCCCCC---C-----------------------------------------------------------cc---
Confidence             22221111100   0                                                           00   


Q ss_pred             cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069        240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVI  319 (461)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~  319 (461)
                             +   .+.++     .+|  +++.......+....+.....++|.|+++.|.  .+.+...+...++.++++++
T Consensus       208 -------~---~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  268 (399)
T PRK05122        208 -------R---LPFRR-----VLG--RVWPYGMGLALASIGFGTIATFITLYYAARGW--DGAALALTLFGVAFVGARLL  268 (399)
T ss_pred             -------c---hhHHH-----HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHH
Confidence                   0   00000     011  11222222223344455566788888877776  34566777888899999999


Q ss_pred             hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069        320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF  399 (461)
Q Consensus       320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  399 (461)
                      .|++.||+++++..  ..+..+.++..+...+.++.+..++..++.|++.+..++.....+.+.+|+++++++.|+.+..
T Consensus       269 ~g~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~  346 (399)
T PRK05122        269 FGNLINRLGGLRVA--IVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVF  346 (399)
T ss_pred             HHHHHHHhccHHHH--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            99999997654433  3444455555555556667777777788999999888888777888999999999999999999


Q ss_pred             HHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       400 ~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      ..+|..++|.+.|.+.|..| |+..|++.+++.+++.+..+.+++
T Consensus       347 ~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~  390 (399)
T PRK05122        347 LDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYR  390 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999875 999999988888877766655433

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=100.00  E-value=1.2e-32  Score=269.21  Aligned_cols=351  Identities=13%  Similarity=0.047  Sum_probs=259.1

Q ss_pred             eeeeehHHHHh-HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc-----cchhhH
Q psy15069          6 SFGILFIEFTK-VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA-----KNVITL   79 (461)
Q Consensus         6 ~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~-----~~~~~l   79 (461)
                      .++++.+.+.+ ++|+|++|.+++.+++.+.+.+++++.|++.||+|+|+++..+.++.++..++.+++     ++++.+
T Consensus        52 ~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~l  131 (462)
T PRK15034         52 LFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIF  131 (462)
T ss_pred             HHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHH
Confidence            45667788766 899999999999999999999999999999999999999999999999999999987     899999


Q ss_pred             HHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH-----H-------------hhc
Q psy15069         80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV-----R-------------EYG  140 (461)
Q Consensus        80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~-----~-------------~~g  140 (461)
                      ++. |++.|++ +..+++....+++||| |+||+++|+...+.++|..+.+++...++     +             ..+
T Consensus       132 li~-r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~  209 (462)
T PRK15034        132 IVI-ALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMS  209 (462)
T ss_pred             HHH-HHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHH
Confidence            984 9999998 6688889999999996 67999999996555566555444443322     2             335


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCc
Q psy15069        141 WKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVIST  220 (461)
Q Consensus       141 w~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (461)
                      ||.+.++..++.++..++.+++.++++..+                                                  
T Consensus       210 ~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~--------------------------------------------------  239 (462)
T PRK15034        210 LANAAWIWVPLLAIATIAAWSGMNDIASSR--------------------------------------------------  239 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCccccc--------------------------------------------------
Confidence            888888888888777766666544321100                                                  


Q ss_pred             cccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCch
Q psy15069        221 QAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS  300 (461)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~  300 (461)
                                                .+. +..     .+.+|+|+.|++++.+++.+.++..+..++|.|.++ .++..
T Consensus       240 --------------------------~~~-~~~-----~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~  286 (462)
T PRK15034        240 --------------------------ASI-ADQ-----LPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDV  286 (462)
T ss_pred             --------------------------cCH-HHH-----HHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChH
Confidence                                      000 111     136899999999999999999998898899999854 33333


Q ss_pred             hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH----HHhhhh--hhHHHHHHHHHHHhhhhhhHHH
Q psy15069        301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT----VICAFC--YNYVELAIYAGVFGAMIGAYVG  374 (461)
Q Consensus       301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~l~g~~~~~~~~  374 (461)
                      .......+..+...+.++++|+++||+|.+|.....  ++...++.    ...+..  .+.+.....++...++.|..+.
T Consensus       287 ~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~--~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng  364 (462)
T PRK15034        287 NILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLIN--FIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG  364 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHH--HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccch
Confidence            333334456688889999999999998766654432  22222221    111111  1344444433333344444455


Q ss_pred             HHHHHHHHhcCc---------------------cchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHH
Q psy15069        375 LTSVILVDLLGL---------------------DRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF  433 (461)
Q Consensus       375 ~~~~~~~~~~~~---------------------~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l  433 (461)
                      ....++.+++|+                     ++.|.+.|+....+.+|+++-|.+.|...+.+|+|...|+...+.++
T Consensus       365 svfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~  444 (462)
T PRK15034        365 STFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYI  444 (462)
T ss_pred             HHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence            555566666663                     26789999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHH
Q psy15069        434 VSGVMLFVIP  443 (461)
Q Consensus       434 ~~~~~~~~~~  443 (461)
                      ++..+.+...
T Consensus       445 ~~~~~~w~~y  454 (462)
T PRK15034        445 VCVLLTWLVY  454 (462)
T ss_pred             HHHHHHHHHh
Confidence            8888776543

>TIGR00899 2A0120 sugar efflux transporter

Probab=100.00  E-value=2.7e-32  Score=267.03  Aligned_cols=345  Identities=13%  Similarity=0.095  Sum_probs=261.6

Q ss_pred             HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeee-hhhHHHHHHHHHhhcccchhhHHHHhhccccccc
Q psy15069         13 EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTI-CGAILGSACLAVSVFAKNVITLCITIGFGTGLGF   91 (461)
Q Consensus        13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~-~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~   91 (461)
                      .+++++|.|..++|++.+++.+...+.+|+.|++.||+|||+.++ .+.++..++.++++++++++.+++. |++.|.+.
T Consensus        23 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~  101 (375)
T TIGR00899        23 FLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVL-GVLLSSFA  101 (375)
T ss_pred             HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHH-HHHHHhhh
Confidence            457889999999999999999999999999999999999988755 4566667777888999999988874 78888777


Q ss_pred             cccchhHHHHHHhhhh-ccchhh--hhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15069         92 GLIYLPAIVSVTCYFE-RLRSLA--TGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQ  168 (461)
Q Consensus        92 ~~~~~~~~~~~~~~f~-~~rg~a--~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~  168 (461)
                      +...+.......++.| ++|+++  .++...+.++|.+++|++++.+.+.+|||++|++.++..++..+..+++.|+++.
T Consensus       102 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  181 (375)
T TIGR00899       102 STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPR  181 (375)
T ss_pred             hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            7777777777777775 445543  6888888999999999999999999999999999998877776666555554321


Q ss_pred             CCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCch
Q psy15069        169 PVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDD  248 (461)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (461)
                      ++  +.+                                                          +++            
T Consensus       182 ~~--~~~----------------------------------------------------------~~~------------  189 (375)
T TIGR00899       182 GA--PGA----------------------------------------------------------LTR------------  189 (375)
T ss_pred             Cc--ccc----------------------------------------------------------cCc------------
Confidence            11  000                                                          000            


Q ss_pred             hhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC
Q psy15069        249 TKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP  327 (461)
Q Consensus       249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~  327 (461)
                        .+.+     +.+++|.++.+.+..++..........++|.++ ++.|.++.+.+.+.....+..++++++.|++.||+
T Consensus       190 --~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~  262 (375)
T TIGR00899       190 --LEVR-----GLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF  262 (375)
T ss_pred             --chhh-----hhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence              0000     134566666655555555544455566788887 77899999999988888888888999999999997


Q ss_pred             CcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhc
Q psy15069        328 CVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVG  407 (461)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g  407 (461)
                      ++|+...  .+.+...+......+.++.+..++..++.|++.+...+....+..|..|+ +++++.++.+...++|..++
T Consensus       263 g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g  339 (375)
T TIGR00899       263 GKRRLML--LAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIA  339 (375)
T ss_pred             cchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHH
Confidence            6555433  33333334444444556677777777888888888888888888898875 56799999999999999999


Q ss_pred             cceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        408 PPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       408 p~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      |.+.|.+.|..| |+..|++.+++.+++.++...
T Consensus       340 ~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~  372 (375)
T TIGR00899       340 GSVGGILAERWS-YHAVYWFAIVMLIVALFCLLL  372 (375)
T ss_pred             HHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHhe
Confidence            999999999875 999999988888777766544

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=100.00  E-value=6.1e-33  Score=280.88  Aligned_cols=374  Identities=13%  Similarity=0.096  Sum_probs=276.0

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      .++..|++.+|+|.+..+.+|+.+.+.+++.+++++.|++.||+|||+++..+.+++.++.+++++++|++.+++. |++
T Consensus        25 v~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~-r~l  103 (495)
T PRK14995         25 LHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIAT-RAL  103 (495)
T ss_pred             HHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH-HHH
Confidence            4567899999999999999999999999999999999999999999999999999999999999999999999985 999


Q ss_pred             ccccccccchhHHHHHHhhh-h-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         87 TGLGFGLIYLPAIVSVTCYF-E-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f-~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +|+|.+...+.....+.+++ | |+|++++|+.....++|..++|++++.+.+.+|||+.|++...++++..++.++..|
T Consensus       104 ~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~  183 (495)
T PRK14995        104 LAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP  183 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999998888877777766 4 889999999999999999999999999999999999999998888777666666555


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc--
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC--  242 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  242 (461)
                      +++.+++  ++.+           ..+........ ...           ....  ++.   .++.   .+...-..+  
T Consensus       184 ~~~~~~~--~~~d-----------~~g~~~~~~~~-~~l-----------~~~~--~~~---~~~~---~~~~~~~~~~~  230 (495)
T PRK14995        184 RQAGRRD--QPLN-----------LGHALMLIVAI-LLL-----------VYSA--KTA---LKGF---LSLWVTSLTLL  230 (495)
T ss_pred             CCCCCCC--CCCC-----------hHhHHHHHHHH-HHH-----------HHHH--Hhc---cccC---CchHHHHHHHH
Confidence            4321110  0000           00000000000 000           0000  000   0000   000000000  


Q ss_pred             ------ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhh
Q psy15069        243 ------LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMV  315 (461)
Q Consensus       243 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~  315 (461)
                            .......+...+++.+.+++|+|.+....+..++.....+....+.|.|++ .+|.++.+++.......++..+
T Consensus       231 ~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~  310 (495)
T PRK14995        231 TGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGF  310 (495)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence                  000000001122334457889999888888888877777788889999984 5799999999999999999999


Q ss_pred             hhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069        316 SRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF---CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA  392 (461)
Q Consensus       316 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (461)
                      ++++.|++.||+++|+.  +..++++.+++.+.+..   .++.+..+...++.|++.+...+.....+.+..|+++++.+
T Consensus       311 ~~~~~g~l~~r~g~~~~--~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~  388 (495)
T PRK14995        311 SGPIAGILVSRLGLRLV--ATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAA  388 (495)
T ss_pred             HHHHHHHHHHHcCchHH--HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchH
Confidence            99999999999765443  33444444444433322   23555566678889999998888888888899999999999


Q ss_pred             HHHHHHHHHhhhhhccceeeeeec
Q psy15069        393 FGLLLLFQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       393 ~g~~~~~~~~g~~~gp~i~g~l~~  416 (461)
                      .++.++..++|+.+|+.+.|.+.+
T Consensus       389 ~~~~~~~~~lG~~~G~ai~g~i~~  412 (495)
T PRK14995        389 GAIETMAYELGAGLGIAIFGLLLS  412 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998865

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=100.00  E-value=6.6e-32  Score=267.37  Aligned_cols=353  Identities=15%  Similarity=0.184  Sum_probs=269.6

Q ss_pred             eeeehHHHHhHhcCCCcc-----HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHH
Q psy15069          7 FGILFIEFTKVFQEGDGV-----TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCI   81 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i   81 (461)
                      +..++|.+.+++|.+..+     .|++.+++.+...+++|+.|++.||+|||+++..+.++..++.+++.++++++.+++
T Consensus        33 ~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (408)
T PRK09874         33 VMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLI  112 (408)
T ss_pred             hhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            446789999999998765     489999999999999999999999999999999999999999999889999999987


Q ss_pred             HhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069         82 TIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI  160 (461)
Q Consensus        82 ~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~  160 (461)
                      . |++.|++.+. .+.....+.+++ +++|++++++...+.++|.+++|++.+.+.+.+|||++|++.+++.++..+..+
T Consensus       113 ~-~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  190 (408)
T PRK09874        113 L-RALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTL  190 (408)
T ss_pred             H-HHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence            5 8999987654 555666677777 578999999999999999999999999999989999999999988777666555


Q ss_pred             hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069        161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (461)
                      +..++++.+.+ ++                                                            ++    
T Consensus       191 ~~~~~~~~~~~-~~------------------------------------------------------------~~----  205 (408)
T PRK09874        191 FCIRENFQPVS-KK------------------------------------------------------------EM----  205 (408)
T ss_pred             HHhccCccccc-ch------------------------------------------------------------hh----
Confidence            54443321110 00                                                            00    


Q ss_pred             ccccCCchhhhhHhhhhccccccchhHHHH-HHHHHHHhhccccchhhHhhHHHHhCCCchh----hHHHHHHHhhhhhh
Q psy15069        241 TCLNLSDDTKQTLREMLDMELLRDPIFILF-TISNIFTSIGFNVPYVYIVKLAEQRGVTRSN----ASSLISIVGAANMV  315 (461)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~~~~~~~~~  315 (461)
                            .+.+..      .+.+++|+++.. .+..+...........+++.|.++.+.+..+    .+.+.++.+++.++
T Consensus       206 ------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~  273 (408)
T PRK09874        206 ------LHMREV------VTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALL  273 (408)
T ss_pred             ------hHHHHH------HHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence                  000011      123566666543 3333333444445567778887654433332    45556667788889


Q ss_pred             hhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069        316 SRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL  395 (461)
Q Consensus       316 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  395 (461)
                      +++..|+++||+++++...  .+..+..+..+...+.++.+.+++..++.|++.+...+.....+.+..|++++++.+++
T Consensus       274 ~~~~~g~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  351 (408)
T PRK09874        274 SAPRLGKLGDRIGPEKILI--TALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSY  351 (408)
T ss_pred             HHHHHHHHHhccccchhHH--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehH
Confidence            9999999999976555443  34444445555555566777777788889999998888888888899999999999999


Q ss_pred             HHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        396 LLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       396 ~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      .+....+|..+||.++|.+.|..| |+..|++.+++.+++.+..+.
T Consensus       352 ~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~  396 (408)
T PRK09874        352 NQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWN  396 (408)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999875 999999999888887776654

>KOG2532|consensus

Probab=100.00  E-value=1.8e-33  Score=276.89  Aligned_cols=375  Identities=17%  Similarity=0.200  Sum_probs=289.5

Q ss_pred             HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc--chhhHHHHhhcccccccc
Q psy15069         15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK--NVITLCITIGFGTGLGFG   92 (461)
Q Consensus        15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~--~~~~l~i~~~~l~G~g~~   92 (461)
                      ..++++|..+.|++++.+..++.+++.++|.++||||.|+++..+.++.++++++..++.  +++.+++ .|+++|++.|
T Consensus        65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~-~R~lqGl~~g  143 (466)
T KOG2532|consen   65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLV-LRFLQGLGQG  143 (466)
T ss_pred             CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHH-HHHHhHHHHh
Confidence            457899999999999999999999999999999999999999999999999999977764  4555555 5999999999


Q ss_pred             ccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh-hchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15069         93 LIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE-YGWKITLLVLSVTVLSAVLFGILLRPLEEQPV  170 (461)
Q Consensus        93 ~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~-~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~  170 (461)
                      ..+++...+..+|.| +||++..++..++..+|.++.-|+++.+++. +||++.|++.|+++++..++++++-.+.|.+.
T Consensus       144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h  223 (466)
T KOG2532|consen  144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH  223 (466)
T ss_pred             HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence            999999999999995 9999999999999999999999999999998 99999999999999998877666544332221


Q ss_pred             CCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhh
Q psy15069        171 EEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTK  250 (461)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (461)
                        +             +-+++|.+.+.+.                                +.+++.           . 
T Consensus       224 --~-------------~is~~El~~I~~~--------------------------------k~~~~~-----------~-  244 (466)
T KOG2532|consen  224 --P-------------NISEKELKYIEKG--------------------------------KSEAHV-----------K-  244 (466)
T ss_pred             --C-------------CCCHHHHHHHHhc--------------------------------cccccc-----------C-
Confidence              0             0111111111111                                000000           0 


Q ss_pred             hhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCc
Q psy15069        251 QTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCV  329 (461)
Q Consensus       251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~  329 (461)
                      .. .+...+++++++.+|.+.++.++.+.+.+.+..|+|.|+ +.++++..+.|++.++..+...+.++++|.++||...
T Consensus       245 ~~-~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~  323 (466)
T KOG2532|consen  245 KK-PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTF  323 (466)
T ss_pred             CC-CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            00 233344689999999999999999999999999999999 6789999999999999999999999999999998644


Q ss_pred             -------chhHHHHHHHHHHHHHHHHhhhhhh--HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069        330 -------NRLYIYNGCLAICGAATVICAFCYN--YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ  400 (461)
Q Consensus       330 -------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  400 (461)
                             +|+..-.++....+++++.+.+.++  .+..++++.+.-...|...+....-..+.. +++.+..+|+.+...
T Consensus       324 ~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~  402 (466)
T KOG2532|consen  324 RILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVG  402 (466)
T ss_pred             ccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHH
Confidence                   4556666777777888887777663  222222222222223333334443334434 488999999999999


Q ss_pred             Hhhhhhccceeeeeec-c-cCCchHHHHHHhHHHHHHHHHHHHHHHhhHhHhh
Q psy15069        401 GIASLVGPPIAGFLYD-S-TLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLK  451 (461)
Q Consensus       401 ~~g~~~gp~i~g~l~~-~-~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~  451 (461)
                      .+.++++|.+.|.+.. . ...|+.+|++.+++.+++.+...+.-..++.+..
T Consensus       403 ~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~  455 (466)
T KOG2532|consen  403 ALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWT  455 (466)
T ss_pred             HHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcccCcc
Confidence            9999999999999994 2 2369999999999999988776655433333333

>PRK10504 putative transporter; Provisional

Probab=100.00  E-value=2.5e-32  Score=275.55  Aligned_cols=383  Identities=12%  Similarity=0.082  Sum_probs=269.8

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      .+....|.+.+++|.+..+.+++.+.+.++..+++++.|++.||+|||++++.+.++.+++.+++.++++++.+++. |+
T Consensus        28 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~  106 (471)
T PRK10504         28 IVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLA-RV  106 (471)
T ss_pred             HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH-HH
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999998875 99


Q ss_pred             cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      ++|++.+...+.....+.+++| ++|++++|+...+.++|..++|++++.+.+..|||+.|.+...++++..+......|
T Consensus       107 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~  186 (471)
T PRK10504        107 LQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP  186 (471)
T ss_pred             HHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999988888888899985 788999999999999999999999999999999999999988777766655554443


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc-c-cccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE-D-KTTC  242 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~  242 (461)
                      +.+.+.   ++.+.  .. ...............+                    +++... ........-.. . ...+
T Consensus       187 ~~~~~~---~r~~~--~~-~~~~~~~~~~~~~~~~--------------------~~~~~~-~~~~~~~~~~~~~~~~~~  239 (471)
T PRK10504        187 NYTMQT---RRFDL--SG-FLLLAVGMATLTLALD--------------------GSKGLG-LSPLAIAGLVAVGVVALL  239 (471)
T ss_pred             CccccC---CCCCh--HH-HHHHHHHHHHHHHHHh--------------------cCCcCC-cchHHHHHHHHHHHHHHH
Confidence            321110   00000  00 0000000000000000                    000000 00000000000 0 0000


Q ss_pred             ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069        243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRVILG  321 (461)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g  321 (461)
                      . ...+.+...++..+.+++|||.++...+..++..........+.|.|++ ..|.++.+.++......++.+++.++.|
T Consensus       240 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~  318 (471)
T PRK10504        240 L-YLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVV  318 (471)
T ss_pred             H-HHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0 0000000011222335789999988888888877777667778888885 5899999999999999999999999999


Q ss_pred             hccCCCCcchhHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069        322 YISDRPCVNRLYIYNGCLAICGAATVICAFC---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL  398 (461)
Q Consensus       322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  398 (461)
                      ++.||+++++...  .+..+.++...++.+.   ++.+...+..++.|++.+...+....+..+.+|++.++.+.|+.++
T Consensus       319 ~l~~r~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  396 (471)
T PRK10504        319 QVVNRFGYRRVLV--ATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSM  396 (471)
T ss_pred             HHHHHcCchHHHH--HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHH
Confidence            9999976555443  3333333333332222   2333344556677888888888888889999999999999999999


Q ss_pred             HHHhhhhhccceeeeeecccC
Q psy15069        399 FQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       399 ~~~~g~~~gp~i~g~l~~~~g  419 (461)
                      ...+|..+|+.+.|.+.+..|
T Consensus       397 ~~~~g~~ig~~i~g~ll~~~g  417 (471)
T PRK10504        397 IMQLSMSIGVTIAGLLLGLFG  417 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999988754

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=100.00  E-value=1.2e-31  Score=262.93  Aligned_cols=345  Identities=13%  Similarity=0.083  Sum_probs=269.1

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceee----ehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVT----ICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~----~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      .++|.+.+++|.|..++|++.+++.+...+++++.|++.||+|||+..    ..+..+..+  .++.+++++|.+++. |
T Consensus        25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~-~  101 (382)
T TIGR00902        25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIA-I  101 (382)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHH-H
Confidence            456689999999999999999999999999999999999999985432    222222222  244567889999885 8


Q ss_pred             ccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +++|.+.+...+...++..+ ++|+|++++|....+.++|.+++|++++.+.+.+|||..|.+..+..+.. +....++|
T Consensus       102 ~l~~~~~~~~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~-~~~~~~~~  179 (382)
T TIGR00902       102 GLFALFFSAGMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFM-LIGFLIKP  179 (382)
T ss_pred             HHHHHHHccchhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH-HHHHHcCC
Confidence            88898888877777666554 47889999999999999999999999999999999999998876553322 22223322


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      ++ .+++++++                                                          +++        
T Consensus       180 ~~-~~~~~~~~----------------------------------------------------------~~~--------  192 (382)
T TIGR00902       180 TI-PPKDAIPE----------------------------------------------------------DES--------  192 (382)
T ss_pred             CC-CCCccccc----------------------------------------------------------ccc--------
Confidence            21 11100000                                                          000        


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYIS  324 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~  324 (461)
                        + .++..     .+++|+|++|...+..++...+...+..+.|.|+++.|.++.+.+.+++...++.+++.++.+++.
T Consensus       193 --~-~~~~~-----~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~  264 (382)
T TIGR00902       193 --Q-GDSAF-----IALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLF  264 (382)
T ss_pred             --c-cchhH-----HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHH
Confidence              0 00111     146899999999888888888888899999999988999999999999999999999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH-HHHHhh
Q psy15069        325 DRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL-LFQGIA  403 (461)
Q Consensus       325 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g  403 (461)
                      ||++.++  ++..+.+..++......+.++.+.++...+++|++.+...+....++.+. |+++++++.++++ ...++|
T Consensus       265 ~r~g~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g  341 (382)
T TIGR00902       265 QNCSARD--LLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGL  341 (382)
T ss_pred             hhCCHHH--HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHH
Confidence            9965444  34467777777777778888988889899999999999999999999988 8889999999987 457799


Q ss_pred             hhhccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069        404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM  438 (461)
Q Consensus       404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~  438 (461)
                      ..+||.++|+++|+.| + ..|...+++.+++.++
T Consensus       342 ~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       342 IAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             HHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence            9999999999999986 4 6677777777665443

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK09952 shikimate transporter; Provisional

Probab=100.00  E-value=1e-31  Score=267.83  Aligned_cols=361  Identities=15%  Similarity=0.169  Sum_probs=252.2

Q ss_pred             eeeehHHH-HhHh--cCCCccHHHHH-----HHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhh
Q psy15069          7 FGILFIEF-TKVF--QEGDGVTSWIA-----SILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVIT   78 (461)
Q Consensus         7 ~~~~~~~~-~~~~--~~~~~~~~~~~-----s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~   78 (461)
                      ++.+.|.. .+++  +.++. .+++.     ++..++..+++++.|++.||+|||+++..+.++++++.++++++++++.
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~  119 (438)
T PRK09952         41 YGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFST  119 (438)
T ss_pred             HHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence            34455543 4444  56665 56654     3445667788899999999999999999999999999999999999873


Q ss_pred             --------HHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH--------hhch
Q psy15069         79 --------LCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR--------EYGW  141 (461)
Q Consensus        79 --------l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~--------~~gw  141 (461)
                              +++ .|+++|++.+..++....++.|++| |+|++.++..+.+..+|.++++.+...+..        .+||
T Consensus       120 ~~~~~~~~l~~-~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gW  198 (438)
T PRK09952        120 IGWWAPVLLVT-LRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGW  198 (438)
T ss_pred             HHHHHHHHHHH-HHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccCh
Confidence                    554 5999999999999999999999995 789999999999999999999888776653        4799


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcc
Q psy15069        142 KITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQ  221 (461)
Q Consensus       142 ~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (461)
                      |++|++.++..++..   +..+..+|+|++++.++                                             
T Consensus       199 r~~f~~~~~~~l~~~---~l~~~~~es~~~~~~~~---------------------------------------------  230 (438)
T PRK09952        199 RIPFLFSIVLVLIAL---WVRNGMEESAEFEQQQH---------------------------------------------  230 (438)
T ss_pred             HHHHHHHHHHHHHHH---HHHHhCCCChhHHHHHh---------------------------------------------
Confidence            999998776644322   11112222222100000                                             


Q ss_pred             ccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHH-HHHHHhhccccchhhHhhHH-HHhCCCc
Q psy15069        222 AQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTI-SNIFTSIGFNVPYVYIVKLA-EQRGVTR  299 (461)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~s~  299 (461)
                            +    .++.++           +.+..    ..++++|+.+...+ ..++.....+....|.|.|+ ++.|++.
T Consensus       231 ------~----~~~~~~-----------~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~  285 (438)
T PRK09952        231 ------E----QAAAKK-----------RIPVI----EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPR  285 (438)
T ss_pred             ------h----cccccc-----------cCCHH----HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence                  0    000000           00000    02356666666543 44555667777888999998 6788888


Q ss_pred             hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh--hh-hh-hHHHHHHHHHHHhhhhhhHHHH
Q psy15069        300 SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC--AF-CY-NYVELAIYAGVFGAMIGAYVGL  375 (461)
Q Consensus       300 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~--~~-~~-~~~~~~~~~~l~g~~~~~~~~~  375 (461)
                      .....+..+.++..+++.++.|+++||+++|+...  .+.++..++.+.+  .. .. +.+.++...++.+++.+...+.
T Consensus       286 ~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  363 (438)
T PRK09952        286 ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYI--TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCV  363 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH--HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence            76666666677888889999999999987665443  2332322222211  11 22 2334444556667888877888


Q ss_pred             HHHHHHHhcCccchhHHHHHHHHHH-Hhhhhhccceeeeeeccc-CCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        376 TSVILVDLLGLDRLTNAFGLLLLFQ-GIASLVGPPIAGFLYDST-LSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~~gp~i~g~l~~~~-g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      .++++.|.+|++.|+++.|+.+... .+++.++|.+.|++.|.. ++|...+...+++.+++.+..+.+++
T Consensus       364 ~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~  434 (438)
T PRK09952        364 QQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD  434 (438)
T ss_pred             HHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence            8899999999999999999966554 489999999999999865 46888888888888877777665543

>PRK12382 putative transporter; Provisional

Probab=100.00  E-value=1.3e-31  Score=263.94  Aligned_cols=341  Identities=16%  Similarity=0.122  Sum_probs=252.2

Q ss_pred             ehH-HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hc-----ccchhhHH
Q psy15069         10 LFI-EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VF-----AKNVITLC   80 (461)
Q Consensus        10 ~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~-----~~~~~~l~   80 (461)
                      ++| ++.+|+|.|..++|++.+++.+.+.+++|+.|++.||+|||++++.+.+++.++.+..   ++     .++++.++
T Consensus        37 ~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  116 (392)
T PRK12382         37 VIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV  116 (392)
T ss_pred             hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence            344 4678999999999999999999999999999999999999999999988877665432   22     24677777


Q ss_pred             HHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFG  159 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~  159 (461)
                      + .|+++|++.+...++..+++.+++ +|+|++++++...+.++|..++|++++.+.+.+|||+.+.+..+..++..   
T Consensus       117 ~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---  192 (392)
T PRK12382        117 V-GRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW---  192 (392)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---
Confidence            7 499999999988888888888888 58899999999999999999999999999998999987765544433222   


Q ss_pred             hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                      .+.++.++.+.++  +                                                            +   
T Consensus       193 ~~~~~~~~~~~~~--~------------------------------------------------------------~---  207 (392)
T PRK12382        193 AFNGTVRKVPAHA--G------------------------------------------------------------E---  207 (392)
T ss_pred             HHHHhccCCCCCc--c------------------------------------------------------------c---
Confidence            1222211111000  0                                                            0   


Q ss_pred             cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069        240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVI  319 (461)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~  319 (461)
                            +.+.++..+      .++.+.+     ..++..........+.|.|+++.+.+.  .+.......++.++++++
T Consensus       208 ------~~~~~~~~~------~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  268 (392)
T PRK12382        208 ------RPSLWSVVG------LIWKPGL-----GLALQGVGFAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVL  268 (392)
T ss_pred             ------CchHHHHHH------HHHHhHH-----HHHHHHHHHhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHH
Confidence                  000001111      1111111     222233344455678888887777653  556667778888999999


Q ss_pred             hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069        320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF  399 (461)
Q Consensus       320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  399 (461)
                      .|++.||+++++...  .+..+.++..++..+.++.+..++..++.|++.+...+.....+.+.+|+++|+++.|+.+..
T Consensus       269 ~g~l~~r~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~  346 (392)
T PRK12382        269 FGWMPDRFGGVKVAI--VSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAF  346 (392)
T ss_pred             HHHHHHhcCCCeehH--HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            999999987665544  334444455555555667777777788899998888888888889999999999999999999


Q ss_pred             HHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       400 ~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      ..+|..+||.+.|++.|+.| |+..|.+.+++.+++.+..+.
T Consensus       347 ~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~  387 (392)
T PRK12382        347 QDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTIL  387 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999875 999999999888777766543

>PRK03633 putative MFS family transporter protein; Provisional

Probab=100.00  E-value=5e-32  Score=265.67  Aligned_cols=343  Identities=14%  Similarity=0.116  Sum_probs=255.4

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      ...++|.+++++|.|..++|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.+.+++++|++.+++. |++
T Consensus        25 ~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l  103 (381)
T PRK03633         25 LNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAW-RFV  103 (381)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHH
Confidence            4577999999999999999999999999999999999999999999999999999999999999999999999985 899


Q ss_pred             ccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         87 TGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      +|++.+...+.....+.++. +++|++++++.+.+.++|..++|++++.+.+...|...+. .+..... .+..++.+.+
T Consensus       104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~  181 (381)
T PRK03633        104 AGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAA-ILPLLFTRIL  181 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHH-HHHHHHhccc
Confidence            99999988877766666665 6889999999999999999999999999877544433332 2222211 1111222211


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      + .+++   +                                                           ++         
T Consensus       182 ~-~~~~---~-----------------------------------------------------------~~---------  189 (381)
T PRK03633        182 N-QQAE---N-----------------------------------------------------------HD---------  189 (381)
T ss_pred             C-CCCC---C-----------------------------------------------------------CC---------
Confidence            1 1000   0                                                           00         


Q ss_pred             CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069        246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD  325 (461)
Q Consensus       246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d  325 (461)
                      .    .+.     .+.+|+|.++......++....+.....++|.|+++.|.+..+.+.+.+...++.+++++..|++.|
T Consensus       190 ~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d  260 (381)
T PRK03633        190 S----TSI-----WPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLAD  260 (381)
T ss_pred             C----CCH-----HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence            0    000     1235677766554444444445555667899999888999999999999999999999999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhh
Q psy15069        326 RPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASL  405 (461)
Q Consensus       326 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~  405 (461)
                      |+++++..  ..+..+.+++.....  . ........++.|++.+...|.....+.|..|+++++...+..+...++|.+
T Consensus       261 r~~~~~~l--~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~  335 (381)
T PRK03633        261 RFGRLLVL--RVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSL  335 (381)
T ss_pred             HcCcHHHH--HHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence            97654433  333444343333222  1 222334556667766677888888888999988888888898889999999


Q ss_pred             hccceeeeeecccCCchHHHHHHhHHHHHHHHHH
Q psy15069        406 VGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       406 ~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~  439 (461)
                      +||.++|++.|+.| ++..|.+.+.+.+++.+..
T Consensus       336 igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~  368 (381)
T PRK03633        336 LGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLML  368 (381)
T ss_pred             HHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHH
Confidence            99999999999875 8889888877776655443

>KOG3764|consensus

Probab=100.00  E-value=8.2e-33  Score=254.16  Aligned_cols=350  Identities=15%  Similarity=0.137  Sum_probs=295.6

Q ss_pred             HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069         15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI   94 (461)
Q Consensus        15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~   94 (461)
                      .++.+-+.+++|++++.+.+...+.+|+.|.++||+|+|..+++|.++...++++.+|.++++.++++ |.+||+|.++.
T Consensus        98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vA-R~LQgvgsA~~  176 (464)
T KOG3764|consen   98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVA-RSLQGVGSAFA  176 (464)
T ss_pred             ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHH-HHHhhhhHHHH
Confidence            45677889999999999999999999999999999999999999999999999999999999999987 99999999999


Q ss_pred             chhHHHHHHhhhh--ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15069         95 YLPAIVSVTCYFE--RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEE  172 (461)
Q Consensus        95 ~~~~~~~~~~~f~--~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~  172 (461)
                      ++++.+++.+.||  ++|++++|+.-.+.++|-.++||+++.+.+..|.+.+|++++++++....+.++..++.+.++++
T Consensus       177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~  256 (464)
T KOG3764|consen  177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS  256 (464)
T ss_pred             HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence            9999999999995  56899999999999999999999999999999999999999999999998888876654332210


Q ss_pred             cccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhh
Q psy15069        173 PVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQT  252 (461)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (461)
                      ++                                                             +             ..+
T Consensus       257 ~~-------------------------------------------------------------~-------------~~~  262 (464)
T KOG3764|consen  257 TE-------------------------------------------------------------Q-------------GTP  262 (464)
T ss_pred             cc-------------------------------------------------------------c-------------Ccc
Confidence            00                                                             0             011


Q ss_pred             HhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcch
Q psy15069        253 LREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNR  331 (461)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~  331 (461)
                      +     ++++++|..+.........+.+....-+-++.++ ++...+..+.|+.+....+...++..++|.++||++..|
T Consensus       263 ~-----~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~  337 (464)
T KOG3764|consen  263 M-----WSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR  337 (464)
T ss_pred             H-----HHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh
Confidence            1     2478899888877777777777777778888877 777766669999999999999999999999999977657


Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc------chhHHHHHHHHHHHhhhh
Q psy15069        332 LYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD------RLTNAFGLLLLFQGIASL  405 (461)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~g~~  405 (461)
                      -+....+++..+.+....++++++..+++-.+..+++.+...+........+.+.+      ..|..+++......+|.+
T Consensus       338 wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a  417 (464)
T KOG3764|consen  338 WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYA  417 (464)
T ss_pred             HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhh
Confidence            66667777888888888889999888888877777777766665555555544433      567899999999999999


Q ss_pred             hccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069        406 VGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL  445 (461)
Q Consensus       406 ~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~  445 (461)
                      +||.++|.+.+..| +.|.-.+.++..++.+.++.+++..
T Consensus       418 ~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ll~~v  456 (464)
T KOG3764|consen  418 IGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLLLLRIV  456 (464)
T ss_pred             ccccccchheeehh-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999986 9999999999998888877766553

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=100.00  E-value=6.3e-31  Score=260.06  Aligned_cols=348  Identities=15%  Similarity=0.083  Sum_probs=256.8

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      +...+|++.+++|.+.++.++..+++.+++.+++++.|++.||+|||++++.+.++++++.+++.+++|++.++++ |++
T Consensus        35 ~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-r~l  113 (413)
T PRK15403         35 IQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIA-RFI  113 (413)
T ss_pred             hccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHH-HHH
Confidence            4456788999999999999999999999999999999999999999999999999999999999999999999885 999


Q ss_pred             ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      +|++.+...+.....+.++++ ++|++++++..++.++|..++|++++.+.+..|||+.|++.+++.++..++.++..|+
T Consensus       114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~  193 (413)
T PRK15403        114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE  193 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999988666666677888885 6789999999999999999999999999988899999999998877766554444443


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      ++.+++  ++                                                           .+         
T Consensus       194 ~~~~~~--~~-----------------------------------------------------------~~---------  203 (413)
T PRK15403        194 TVKRGA--VP-----------------------------------------------------------FS---------  203 (413)
T ss_pred             CccccC--CC-----------------------------------------------------------CC---------
Confidence            211110  00                                                           00         


Q ss_pred             CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069        246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRVILGYIS  324 (461)
Q Consensus       246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~  324 (461)
                      .+...+..     +.++|||.+|...+..++.....+.+..+.|.+++ ..|.++.+.++.......+.++++.+.+++.
T Consensus       204 ~~~~~~~~-----~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~  278 (413)
T PRK15403        204 AKSVLRDF-----RNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFV  278 (413)
T ss_pred             hHHHHHHH-----HHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            00001111     24689999999888888877777788888899984 5699999999998888888888888888876


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069        325 DRPCVNRLYIYNGCLAICGAATVICA---FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG  401 (461)
Q Consensus       325 dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  401 (461)
                      +|...+|...........+...+...   ..++.+..++..++++++.+...|......... ....+|++.++.+....
T Consensus       279 ~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~  357 (413)
T PRK15403        279 KDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVIL  357 (413)
T ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHH
Confidence            54323332211111111121111111   122333345677788888887777776433222 22347999999999999


Q ss_pred             hhhhhccceeeeeecccCCchHHHHHHhHHHH
Q psy15069        402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF  433 (461)
Q Consensus       402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l  433 (461)
                      .+..+++.+.|++.++.  -...|...++++.
T Consensus       358 ~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~  387 (413)
T PRK15403        358 MVMAVSVEIGRWLWFNG--GRLPFHLLAVVAG  387 (413)
T ss_pred             HHHHHHHHHHHHHHHcC--CchHHHHHHHHHH
Confidence            99999999999988873  3555555544443

>PRK03893 putative sialic acid transporter; Provisional

Probab=100.00  E-value=6.8e-32  Score=274.23  Aligned_cols=380  Identities=14%  Similarity=0.138  Sum_probs=251.6

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      .+.+.|++.+++|.++.+.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++.++++|++.+++. |++
T Consensus        39 ~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l  117 (496)
T PRK03893         39 ITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIA-RLV  117 (496)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHH
Confidence            4467899999999999999999999999999999999999999999999999999999999999999999999885 899


Q ss_pred             ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      .|++.+..++....++.+++| |+|++++++...+.++|.+++|++.+.+.+.+|||+.|++..+..+. .++.....|+
T Consensus       118 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~  196 (496)
T PRK03893        118 IGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPE  196 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCC
Confidence            999999888888888899885 78999999999999999999999999999999999999864333222 2221112222


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc--cc
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT--CL  243 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  243 (461)
                      +  ++.++++.+.  +          +.++..+.                      .    .     +++++....  ..
T Consensus       197 ~--~~~~~~~~~~--~----------~~~~~~~~----------------------~----~-----~~~~~~~~~~~~~  231 (496)
T PRK03893        197 A--EDWKEKHAGK--A----------PVRTMVDI----------------------L----Y-----RGEHRIINILLTL  231 (496)
T ss_pred             c--hhhhhhcccc--c----------cchhHHHH----------------------H----h-----cchhHHHHHHHHH
Confidence            1  1100000000  0          00000000                      0    0     000000000  00


Q ss_pred             cCCchhhhhHhhh----------------------hccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCch
Q psy15069        244 NLSDDTKQTLREM----------------------LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRS  300 (461)
Q Consensus       244 ~~~~~~~~~~~~~----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~  300 (461)
                      .............                      ......+.+......+..+......+....++|.|+ ++.|++..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~  311 (496)
T PRK03893        232 AAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPH  311 (496)
T ss_pred             HHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHH
Confidence            0000000000000                      000001112222222222222222234567899999 58999999


Q ss_pred             hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069        301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSV  378 (461)
Q Consensus       301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~  378 (461)
                      +.+.+.+...++.++++++.|+++||+++++...  .+..+.++..+.....  .+.+......++.++......+..+.
T Consensus       312 ~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (496)
T PRK03893        312 TVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYV--CSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPK  389 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH--HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHH
Confidence            9999999999999999999999999976555433  3333333333222222  23333333333333333334456677


Q ss_pred             HHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069        379 ILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG  436 (461)
Q Consensus       379 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~  436 (461)
                      ++.|.+|++++++++|+.+....+|+.+||.+.|.+.|..| |...+...+....+.+
T Consensus       390 ~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~~~~~  446 (496)
T PRK03893        390 LIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSFSLTFVV  446 (496)
T ss_pred             HHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHHHHHHH
Confidence            88999999999999999999999999999999999999875 8877766555444433

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=100.00  E-value=7.4e-31  Score=257.68  Aligned_cols=331  Identities=12%  Similarity=0.051  Sum_probs=257.2

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      .+....|.+.+++|.++.+.+++.+++.++..+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |+
T Consensus        23 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  101 (385)
T TIGR00710        23 MYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVL-RF  101 (385)
T ss_pred             HhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HH
Confidence            34566899999999999999999999999999999999999999999999999999999999999999999999885 89


Q ss_pred             cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +.|++.+...+....++.+++| ++|++++++.+....+|..++|.+++.+.+..|||++|++.++..++..+..++..|
T Consensus       102 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (385)
T TIGR00710       102 VQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP  181 (385)
T ss_pred             HHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999995 789999999999999999999999999999899999999998887776665555444


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      +++.+++  ++                                                            +        
T Consensus       182 ~~~~~~~--~~------------------------------------------------------------~--------  191 (385)
T TIGR00710       182 ETLPYEA--RI------------------------------------------------------------Q--------  191 (385)
T ss_pred             CCCCCcc--cC------------------------------------------------------------C--------
Confidence            3211110  00                                                            0        


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                       .++.++..+     +.+|+|.++...+...+.....+....+.|.++ ++.|.++.+.+.+.+...++.++++++.|++
T Consensus       192 -~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l  265 (385)
T TIGR00710       192 -ISTYFETFL-----LLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRF  265 (385)
T ss_pred             -HHHHHHHHH-----HHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             000011111     356788888877776666666677777888888 5789999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069        324 SDRPCVNRLYIYNGCLAICGAATVICAFC-----YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL  398 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  398 (461)
                      .||+++++....  +..+..+...++...     +..+..+...++.|++.+...+.......|..| ++++++.++.+.
T Consensus       266 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~  342 (385)
T TIGR00710       266 IKKWGAKSLLRM--GLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGT  342 (385)
T ss_pred             HHhcCHHHHHHH--HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHH
Confidence            999765554433  233333322222221     223344555677888888888888888888877 678999999998


Q ss_pred             HHHhhhhhccceeeeeec
Q psy15069        399 FQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       399 ~~~~g~~~gp~i~g~l~~  416 (461)
                      ....++.+.+.+.+.+.+
T Consensus       343 ~~~~~g~i~~~~~~~~~~  360 (385)
T TIGR00710       343 LRLVLGAIVGYLVSLIHG  360 (385)
T ss_pred             HHHHHHHHHHHHHHhccc
Confidence            887655555555564444

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=100.00  E-value=1.3e-32  Score=266.67  Aligned_cols=333  Identities=21%  Similarity=0.288  Sum_probs=257.3

Q ss_pred             eeeehH-HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          7 FGILFI-EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         7 ~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      +....| .+.+++|.+..+++++.+++.++..+++++.|++.||+|||+++..+.++.+++.++..+++|++.+++ .|+
T Consensus        15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   93 (352)
T PF07690_consen   15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLI-ARF   93 (352)
T ss_dssp             HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-HHH
T ss_pred             HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhh-hcc
Confidence            445677 889999999999999999999999999999999999999999999999999999666667788886665 599


Q ss_pred             cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +.|++.+...+....++.+++| |+|++++++...+.++|.+++|++++.+.+.+|||+.|++.++++++..++..++.+
T Consensus        94 l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~  173 (352)
T PF07690_consen   94 LLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLP  173 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC-
T ss_pred             ccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhh
Confidence            9999999999999999999996 699999999999999999999999999998899999999999999988776545554


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      +++.+++++.+                                                          ++++       
T Consensus       174 ~~~~~~~~~~~----------------------------------------------------------~~~~-------  188 (352)
T PF07690_consen  174 EPPPPRERESP----------------------------------------------------------KESE-------  188 (352)
T ss_dssp             --STTTT--SS----------------------------------------------------------TTTT-------
T ss_pred             hcccccccccc----------------------------------------------------------cccc-------
Confidence            43322210000                                                          0000       


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCC-chhhHHHHHHHhhhhhhhhhhhhh
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVT-RSNASSLISIVGAANMVSRVILGY  322 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s-~~~~~~~~~~~~~~~~~g~~~~g~  322 (461)
                        ++.+.+..+ ..+.+.++|.+|...+..++..+.......++|.|+ ++.|.+ ..+.+...++..+..++++++.|+
T Consensus       189 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (352)
T PF07690_consen  189 --SKKPKPLKP-GFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGR  265 (352)
T ss_dssp             ----HHHCCCH--CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --ccccccccc-ccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              000000000 011345556566555555666667777889999985 889999 789999999999999999999999


Q ss_pred             ccCCCCcchhHHHHH-HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069        323 ISDRPCVNRLYIYNG-CLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG  401 (461)
Q Consensus       323 l~dr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  401 (461)
                      +.||+++++...... ...+..+.+......++.++.+...++.|++.+...+....++.+.+|+++++++.|+.+...+
T Consensus       266 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  345 (352)
T PF07690_consen  266 LSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGS  345 (352)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHH
T ss_pred             HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            999976554443322 2222222222233333556777788889999999999999999999999999999999999999


Q ss_pred             hhhhhcc
Q psy15069        402 IASLVGP  408 (461)
Q Consensus       402 ~g~~~gp  408 (461)
                      +++.+||
T Consensus       346 ~~~~igP  352 (352)
T PF07690_consen  346 LGGIIGP  352 (352)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHCC
Confidence            9999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11043 putative transporter; Provisional

Probab=100.00  E-value=5.7e-31  Score=260.09  Aligned_cols=329  Identities=14%  Similarity=0.068  Sum_probs=253.3

Q ss_pred             eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069          8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT   87 (461)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~   87 (461)
                      ....|++++++|.++.+.+++.+++.+++.+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |+++
T Consensus        26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~  104 (401)
T PRK11043         26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVL-RFVQ  104 (401)
T ss_pred             HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-HHHH
Confidence            345677899999999999999999999999999999999999999999999999999999999999999999885 8999


Q ss_pred             cccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15069         88 GLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLE  166 (461)
Q Consensus        88 G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~  166 (461)
                      |++.+...+.....+.++++ ++++++.+......++|..++|++++.+.+.+|||+.|++.+++.++..++.++.++++
T Consensus       105 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (401)
T PRK11043        105 AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK  184 (401)
T ss_pred             HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            99988777777778888885 66788889988889999999999999999999999999999888877666554443221


Q ss_pred             CCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCC
Q psy15069        167 EQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLS  246 (461)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (461)
                      +.++   +                                                                        
T Consensus       185 ~~~~---~------------------------------------------------------------------------  189 (401)
T PRK11043        185 KARK---Q------------------------------------------------------------------------  189 (401)
T ss_pred             Cccc---c------------------------------------------------------------------------
Confidence            1000   0                                                                        


Q ss_pred             chhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069        247 DDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDR  326 (461)
Q Consensus       247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr  326 (461)
                      ++.+...+     +.+|+|+++...+...+....++.+..+.|.++++.|++..+.++......++.++++++.+++.||
T Consensus       190 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r  264 (401)
T PRK11043        190 SQDALTFK-----QLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK  264 (401)
T ss_pred             chHHHHHH-----HHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00001111     3567777776555555555555666778899888899999999998888888999999999999999


Q ss_pred             CCcchhHHH-HHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069        327 PCVNRLYIY-NGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA  403 (461)
Q Consensus       327 ~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  403 (461)
                      +++++.... .....+..+.+.....  .++.+...+...+.|++.+..++.......+..| ++++++.|+.+.....+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~  343 (401)
T PRK11043        265 WGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGL  343 (401)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHH
Confidence            765543321 1222222222222222  2344455555677888888888888877777776 67999999999999999


Q ss_pred             hhhccceeeeeeccc
Q psy15069        404 SLVGPPIAGFLYDST  418 (461)
Q Consensus       404 ~~~gp~i~g~l~~~~  418 (461)
                      +..++.+.|.+.|..
T Consensus       344 ~~~~~~~~g~l~~~~  358 (401)
T PRK11043        344 CFLASLLVSALISTP  358 (401)
T ss_pred             HHHHHHHHHHccCCC
Confidence            999999999998853

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=6.5e-32  Score=251.99  Aligned_cols=356  Identities=18%  Similarity=0.169  Sum_probs=284.0

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchh---hHHHHh
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVI---TLCITI   83 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~---~l~i~~   83 (461)
                      ++++.+.+.+|+|+|++|.+++.+++.+...+..++.|.+.||+|.|++...+.++..+-++..+++...+   ++++ +
T Consensus        33 ~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~-~  111 (417)
T COG2223          33 FSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLV-I  111 (417)
T ss_pred             HHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHH-H
Confidence            56778889999999999999999999999999999999999999999999999999999999988886554   8887 4


Q ss_pred             hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc---hhHHHHHHHHHHHHHHHHH
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG---WKITLLVLSVTVLSAVLFG  159 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g---w~~~f~i~~~~~l~~~i~~  159 (461)
                      +++.|++.+. ....+..+++||| |++|.|+|++. ..++|..+...++..+....|   ||.+..+..+..++..++.
T Consensus       112 gll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~  189 (417)
T COG2223         112 GLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLA  189 (417)
T ss_pred             HHHHhcccce-ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            8999997665 5556677899996 77899999999 888998888888888888888   9999999988888877777


Q ss_pred             hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                      ++...+.++.+. +.                                                                 
T Consensus       190 ~~~~~d~p~~r~-~~-----------------------------------------------------------------  203 (417)
T COG2223         190 WLGMNDVPEHRA-SV-----------------------------------------------------------------  203 (417)
T ss_pred             HHHhCCChhhhc-cc-----------------------------------------------------------------
Confidence            766544322110 00                                                                 


Q ss_pred             cccccCCchhh-hhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069        240 TTCLNLSDDTK-QTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSR  317 (461)
Q Consensus       240 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~  317 (461)
                             ++.+ .+.     +.+.+++..|.+++.++....++..+..++|.|+ +++|.++.+++.......+.+.+.|
T Consensus       204 -------~~~~~~~~-----~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R  271 (417)
T COG2223         204 -------KPQLPAQL-----KAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR  271 (417)
T ss_pred             -------cccchhHH-----HHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH
Confidence                   0000 111     1357899999999999999999999999999999 8899999999999999999999999


Q ss_pred             hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh-------hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchh
Q psy15069        318 VILGYISDRPCVNRLYIYNGCLAICGAATVICAFC-------YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLT  390 (461)
Q Consensus       318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~  390 (461)
                      +++|+++||+|.+|..+...  ..+.++.......       .+.+..+..++..+++.|.-......++..++| ++.|
T Consensus       272 p~GG~LsDR~Gg~rv~~~~f--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G  348 (417)
T COG2223         272 PLGGWLSDRIGGRRVTLAVF--VGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETG  348 (417)
T ss_pred             hccchhhhhccchhHHHHHH--HHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhh
Confidence            99999999998777655332  2223332222222       234444444455555555555566667777777 5789


Q ss_pred             HHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069        391 NAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       391 ~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~  446 (461)
                      .+.|+....+++|++.-|...|..+|.+|+|...|++.....+++.+..+....++
T Consensus       349 ~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~  404 (417)
T COG2223         349 AVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR  404 (417)
T ss_pred             HHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999888887766554443

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.98  E-value=1e-31  Score=272.13  Aligned_cols=377  Identities=13%  Similarity=0.124  Sum_probs=275.8

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      .++..|.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|||++++.+.++..++.+++++++|++.+++. |++
T Consensus        21 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~   99 (485)
T TIGR00711        21 VNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIF-RVI   99 (485)
T ss_pred             HHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH-HHH
Confidence            4467899999999999999999999999999999999999999999999999999999999999999999999985 999


Q ss_pred             ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      +|++.+...+....++.+++| ++|++++++..++..+|..++|.+++.+.+.+|||+.|++.+.++++..++.++..|+
T Consensus       100 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~  179 (485)
T TIGR00711       100 QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPR  179 (485)
T ss_pred             HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCC
Confidence            999999999999999999995 8899999999999999999999999999999999999999888877776665555443


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc-ccc-
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT-TCL-  243 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  243 (461)
                      ++.++  +++.+  ..+.......   ...+...                  ..+.++    .  ...++++... ... 
T Consensus       180 ~~~~~--~~~~d--~~g~~l~~~~---~~~~~~~------------------~~~~~~----~--~~~~~~~~~~~~~~~  228 (485)
T TIGR00711       180 DKPAA--SENFD--FLGLLLLSVG---LGSLLYG------------------LSEGPE----R--GWFDSNEILILSITG  228 (485)
T ss_pred             ccccc--cCCCc--HHHHHHHHHH---HHHHHHH------------------HhhCCC----C--CCCCchHHHHHHHHH
Confidence            21111  00000  0000000000   0000000                  000000    0  0000000000 000 


Q ss_pred             -----cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069        244 -----NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSR  317 (461)
Q Consensus       244 -----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~  317 (461)
                           ..........++..+.+++|+|.++...+..++.....+....++|.|+ +..|+++.+.++......++.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~  308 (485)
T TIGR00711       229 LVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSS  308 (485)
T ss_pred             HHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                 0000000001112234578899998888888888888888888999999 4579999999999999999999999


Q ss_pred             hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhh--h--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHH
Q psy15069        318 VILGYISDRPCVNRLYIYNGCLAICGAATVICA--F--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAF  393 (461)
Q Consensus       318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (461)
                      ++.|++.||+++++.  ...+..+.+++..+..  +  ..+.+......++.|++.+...+.......+..|+++++++.
T Consensus       309 ~~~g~l~~r~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~  386 (485)
T TIGR00711       309 PIAGRMGDKIDPRKL--VTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGS  386 (485)
T ss_pred             HHHHHHHhhcCcHHH--HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHH
Confidence            999999999765443  3344444444444433  2  124556666778899999887777777778889999999999


Q ss_pred             HHHHHHHHhhhhhccceeeeeecc
Q psy15069        394 GLLLLFQGIASLVGPPIAGFLYDS  417 (461)
Q Consensus       394 g~~~~~~~~g~~~gp~i~g~l~~~  417 (461)
                      |+.++...+|+.+|+.+.|.+.++
T Consensus       387 ~~~~~~~~~g~~ig~~i~g~~~~~  410 (485)
T TIGR00711       387 SLSNFTRQLGGSIGTALITTILTN  410 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999875

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.98  E-value=1.1e-30  Score=252.56  Aligned_cols=332  Identities=20%  Similarity=0.310  Sum_probs=292.1

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      +.++.+.|.+.+++|.+..+.+++.+...++..+++++.|++.||+|||+.+..+.++..++.++..++++++.+++. |
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   94 (352)
T cd06174          16 GLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVG-R   94 (352)
T ss_pred             hhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHH-H
Confidence            345677899999999999999999999999999999999999999999999999999999999999999999999885 8


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      ++.|++.+...+....++.+++| |+|++++++.....++|..++|.+++.+.+..+||+.+++.++..++..+...+..
T Consensus        95 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (352)
T cd06174          95 FLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL  174 (352)
T ss_pred             HHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999996 68999999999999999999999999999999999999998888776655433321


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (352)
T cd06174         175 --------------------------------------------------------------------------------  174 (352)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh-CCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR-GVTRSNASSLISIVGAANMVSRVILGY  322 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~g~  322 (461)
                                           |.++...+..++..........+.|.+.++. +.+..+.+...+...++..+++++.++
T Consensus       175 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (352)
T cd06174         175 ---------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL  233 (352)
T ss_pred             ---------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 4466677777788888888889999999655 999999999999999999999999999


Q ss_pred             ccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHh
Q psy15069        323 ISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGI  402 (461)
Q Consensus       323 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  402 (461)
                      +.||+++|+. .+..+..+..++.+.....++.+..++..++.|++.+...+....++.|..|+++|++..|+.+....+
T Consensus       234 ~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (352)
T cd06174         234 LSDRLGRRRL-LLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSL  312 (352)
T ss_pred             HHHHHHhhhH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence            9999655541 344566666677777777777788888899999999999999999999999999999999999999999


Q ss_pred             hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        403 ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       403 g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      +..++|.+.|.+.|.. +|+..+.+.+++.+++.+..+
T Consensus       313 ~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~i~~i~~~  349 (352)
T cd06174         313 GGALGPLLAGLLLDTG-GYGGVFLILAALALLAALLLL  349 (352)
T ss_pred             HHHHHHHHHHHHhccc-CcchHHHHHHHHHHHHHHHhe
Confidence            9999999999999875 599999999988888776654

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.98  E-value=2e-32  Score=276.27  Aligned_cols=397  Identities=14%  Similarity=0.087  Sum_probs=261.6

Q ss_pred             eeeehHHHHhHhcCC--------CccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc---c
Q psy15069          7 FGILFIEFTKVFQEG--------DGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK---N   75 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~--------~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~---~   75 (461)
                      ++...|.+..+++.+        ..+.+++.+++.++..+++++.|++.||+|||++++.+.++..++.+++.+..   +
T Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (481)
T TIGR00879        47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALS  126 (481)
T ss_pred             hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            455677788888777        89999999999999999999999999999999999999999999998885544   3


Q ss_pred             hhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHH---HHHHHhhchhHHHHHHHHH
Q psy15069         76 VITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPII---DYTVREYGWKITLLVLSVT  151 (461)
Q Consensus        76 ~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~---~~l~~~~gw~~~f~i~~~~  151 (461)
                      ++.+++ .|++.|+|.+...+....++.+++ +++|++++++.+.+.++|.++++.++   ..+.+..|||+.|++.++.
T Consensus       127 ~~~~~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~  205 (481)
T TIGR00879       127 VEMLIV-GRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIP  205 (481)
T ss_pred             hHHHHH-HHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHH
Confidence            446766 599999999999998989999999 58899999999999999999999998   5555667999999996655


Q ss_pred             HHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCC
Q psy15069        152 VLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVP  231 (461)
Q Consensus       152 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (461)
                      .++..+.. ++.|+.+....++.+.+.. ++         ..++..+.           .++    .++..+.   .   
T Consensus       206 ~~~~~~~~-~~l~~~~~~~~~~~~~~~~-~~---------~~~~~~~~-----------~~~----~~~~~~~---~---  253 (481)
T TIGR00879       206 AGLLFLGL-FFLPESPRWLVGKGRVEEA-RK---------SLARLRGT-----------SGE----DKELLDE---L---  253 (481)
T ss_pred             HHHHHHHH-hcCCCChHHHHHcCChHHH-HH---------HHHHHhCC-----------CCC----cHHHHHH---H---
Confidence            55444333 3344332100000000000 00         00000000           000    0000000   0   


Q ss_pred             CCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhh
Q psy15069        232 ESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGA  311 (461)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~  311 (461)
                       ...+.......+.....+....+.. +. .+.+.++...+..+...........+.|.+.++.|++..+.+.......+
T Consensus       254 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  330 (481)
T TIGR00879       254 -ELIDIKRSIEKRSVQPSWGSLFSST-RR-IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGA  330 (481)
T ss_pred             -HHHHHHHHHHHhhccccHHHHHhcC-ch-hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence             0000000000000000011111100 01 23444555555566556666677778888889999999889999999999


Q ss_pred             hhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhh---h--hhh-----HHHHHHHHHHHhhhhh-hHHHHHHHHH
Q psy15069        312 ANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICA---F--CYN-----YVELAIYAGVFGAMIG-AYVGLTSVIL  380 (461)
Q Consensus       312 ~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~-----~~~~~~~~~l~g~~~~-~~~~~~~~~~  380 (461)
                      +.++++++.|+++||+++|+...  .++++.+++++++.   .  .++     .+.......+++.+.+ ...+....++
T Consensus       331 ~~~~~~~~~g~l~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (481)
T TIGR00879       331 VNFAFTFVAIFLVDRFGRRPLLL--IGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIV  408 (481)
T ss_pred             HHHHHHHHHHHHHHHhcchHHHH--HHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhh
Confidence            99999999999999976555443  33344444433332   1  111     2222222333333333 3345666777


Q ss_pred             HHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      .|.+|+++|+++.|+.+...++|++++|.+.|.+.++.+ |...|++.+++++++++..+..
T Consensus       409 ~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~~~  469 (481)
T TIGR00879       409 SEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVYFF  469 (481)
T ss_pred             hccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHhee
Confidence            999999999999999999999999999999999999875 8888988888887777766543

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK10054 putative transporter; Provisional

Probab=99.97  E-value=2.8e-31  Score=261.17  Aligned_cols=346  Identities=10%  Similarity=0.078  Sum_probs=260.6

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccc
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGL   89 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~   89 (461)
                      +.+++.+++|.+..++|++.+++.+.+.+++++.|++.||+|+|+++..+.++..++.++..++++++.+++. |.+.|.
T Consensus        30 l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~  108 (395)
T PRK10054         30 MTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLF-FALINC  108 (395)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHH
Confidence            3445667899999999999999999999999999999999999999999999999999999999999888875 677777


Q ss_pred             cccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15069         90 GFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQ  168 (461)
Q Consensus        90 g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~  168 (461)
                      +.+...+....+..+.+ +++|++++|+.....++|.+++|++++.+.+ +||+.+|++.+++.++..++..+..|+++.
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~  187 (395)
T PRK10054        109 AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEK  187 (395)
T ss_pred             HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            66666666667777777 5789999999999999999999999998875 799999998888777665554444333211


Q ss_pred             CCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCch
Q psy15069        169 PVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDD  248 (461)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (461)
                      +++  ++                                                            +          ++
T Consensus       188 ~~~--~~------------------------------------------------------------~----------~~  195 (395)
T PRK10054        188 AIA--TE------------------------------------------------------------T----------GS  195 (395)
T ss_pred             ccc--cc------------------------------------------------------------h----------hh
Confidence            110  00                                                            0          00


Q ss_pred             hhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH---HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069        249 TKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA---EQRGVTRSNASSLISIVGAANMVSRVILGYISD  325 (461)
Q Consensus       249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d  325 (461)
                      . .+.     .+.+|+|.++...+..++.......+..+.+.+.   ++.+.+....+..+....+.....++..|++.|
T Consensus       196 ~-~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~  269 (395)
T PRK10054        196 V-WSP-----SVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLN  269 (395)
T ss_pred             h-hhh-----hhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHc
Confidence            0 000     2457888888877777776666655555666665   344666777788888888888888899999999


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhh
Q psy15069        326 RPCVNRLYIYNGCLAICGAATVICAFC-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIAS  404 (461)
Q Consensus       326 r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  404 (461)
                      |.++++.  +..++.+.++......+. ++.+.+.+..+++|++.+...|.....+.+..|++.++++++..+ ...+|.
T Consensus       270 ~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~  346 (395)
T PRK10054        270 AANIRPL--MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGA  346 (395)
T ss_pred             cCCchhH--HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHH
Confidence            9544443  334444445544444443 456556667788999988888888888999999999999998765 567899


Q ss_pred             hhccceeeeeecccCCchHHHHHHhHHHHHHHHHH
Q psy15069        405 LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       405 ~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~  439 (461)
                      .+||.++|.++|+.| +...|++.+...+++.++.
T Consensus       347 ~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~  380 (395)
T PRK10054        347 AINPLVSGVILTTLP-PWSLFVILALAIVAAWLLM  380 (395)
T ss_pred             HHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHHHHH
Confidence            999999999999985 7777776655555444444

>TIGR00895 2A0115 benzoate transport

Probab=99.97  E-value=2e-31  Score=262.55  Aligned_cols=361  Identities=15%  Similarity=0.212  Sum_probs=263.6

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      .++.+.|.+.+++|.+..+.+++.+++.++..+++++.|++.||+|||+++..+.++..++.++..++++++.+++. |+
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  113 (398)
T TIGR00895        35 AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLIL-RF  113 (398)
T ss_pred             HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHH-HH
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999998875 89


Q ss_pred             cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +.|++.+...+...+.+.+++| ++|++++++...+..+|..+++.+.+.+.+.+|||+.|++.+++.++..++.++..|
T Consensus       114 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  193 (398)
T TIGR00895       114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLP  193 (398)
T ss_pred             HHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCC
Confidence            9999999999999999999996 789999999999999999999999999999999999999987776666555555444


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      +++....++++     ++.      +++.++..+.                      .+.+ .+.  ..+++++      
T Consensus       194 ~~~~~~~~~~~-----~~~------~~~~~~~~~~----------------------~~~~-~~~--~~~~~~~------  231 (398)
T TIGR00895       194 ESIDFLVSKRP-----ETV------RRIVNAIAPQ----------------------MQAE-AQS--ALPEQKA------  231 (398)
T ss_pred             CCChHHHhcCH-----HHH------HHHHHHHHHh----------------------cccc-ccc--ccccccc------
Confidence            43211100000     000      0000000000                      0000 000  0000000      


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYIS  324 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~  324 (461)
                      ..+..+...+....  ..+.+..+.+.+..++.....+....++|.+.++.|.+..+.+...+...++.++++++.|++.
T Consensus       232 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~  309 (398)
T TIGR00895       232 TQGTKRSVFKALFQ--GKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLA  309 (398)
T ss_pred             ccchhhHHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00001111111111  1123344555555556666677777888977789999999999999999999999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069        325 DRPCVNRLYIYNGCLAICGAATVIC-AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA  403 (461)
Q Consensus       325 dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  403 (461)
                      ||++++ +. ... ..+.++...+. ...++.+..++..++.|++.+...+...+++.|.+|+++|+++.|+.+....+|
T Consensus       310 ~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g  386 (398)
T TIGR00895       310 DRLGPR-VT-ALL-LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLG  386 (398)
T ss_pred             hhcchH-HH-HHH-HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence            997654 22 222 22222222222 224566667778889999999999999999999999999999999999999999


Q ss_pred             hhhccceeeee
Q psy15069        404 SLVGPPIAGFL  414 (461)
Q Consensus       404 ~~~gp~i~g~l  414 (461)
                      .++||.+.|++
T Consensus       387 ~~~g~~~~G~l  397 (398)
T TIGR00895       387 AIIGPILAGYL  397 (398)
T ss_pred             HHHHHHhHHhc
Confidence            99999999876

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.97  E-value=2.5e-30  Score=254.70  Aligned_cols=345  Identities=13%  Similarity=0.098  Sum_probs=245.1

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      .+....|.+.+++|.+..+++++.+++.++..+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |+
T Consensus        21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-~~   99 (392)
T PRK10473         21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAG-RF   99 (392)
T ss_pred             HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHH-HH
Confidence            34467999999999999999999999999999999999999999999999999999999999999999999988875 89


Q ss_pred             cccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      ++|++.+..++.....+.+++ +++|++++++.+....+|..++|++++.+.+..|||+.|++.++++++..++.++..+
T Consensus       100 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~  179 (392)
T PRK10473        100 LQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILK  179 (392)
T ss_pred             HHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999988888888999998 5889999999999999999999999998888899999999999888777666555544


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      +++.++ +++                                                             +        
T Consensus       180 ~~~~~~-~~~-------------------------------------------------------------~--------  189 (392)
T PRK10473        180 ETRPAR-APA-------------------------------------------------------------A--------  189 (392)
T ss_pred             CCCCcc-cCC-------------------------------------------------------------c--------
Confidence            321110 000                                                             0        


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                        ...++..     .+.+|+|.++...+...+.......+..+.|.++ ++.|+++.+.+.+.+..+++.++++++.+++
T Consensus       190 --~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l  262 (392)
T PRK10473        190 --SSKPREN-----SESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFA  262 (392)
T ss_pred             --cchHHHH-----HHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              0000111     1246777776655544444444444555667776 6789999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069        324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA  403 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  403 (461)
                      .||+++|+...  .+..+..+..+...+.++.+.......+.+.+.+...+..  ...+..|.++++   |.......++
T Consensus       263 ~~r~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~  335 (392)
T PRK10473        263 LGIFKPRTLML--TSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIA  335 (392)
T ss_pred             HHhcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHH
Confidence            99976554433  4444444444444444444333444444444444333332  234444544332   4444445567


Q ss_pred             hhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069        404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG  436 (461)
Q Consensus       404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~  436 (461)
                      ..+|+.+++++.++.| +.......+.+.+...
T Consensus       336 ~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~  367 (392)
T PRK10473        336 QVCGSSLWIWLAAVLG-ISAWNMLIGILIACSI  367 (392)
T ss_pred             HHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHH
Confidence            7777777777887765 5544444444443333

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.97  E-value=2.4e-31  Score=269.09  Aligned_cols=381  Identities=14%  Similarity=0.134  Sum_probs=247.8

Q ss_pred             eeehHHHHhHh--------cCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc------
Q psy15069          8 GILFIEFTKVF--------QEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA------   73 (461)
Q Consensus         8 ~~~~~~~~~~~--------~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~------   73 (461)
                      +...|.+++++        +.++.+.+++.+++.+++.+++++.|++.||+|||++++++.++..++.++++++      
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~  111 (479)
T PRK10077         32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS  111 (479)
T ss_pred             hHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            34557777877        8899999999999999999999999999999999999999999999998887763      


Q ss_pred             ---cc---hhhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--------Hh
Q psy15069         74 ---KN---VITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--------RE  138 (461)
Q Consensus        74 ---~~---~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~  138 (461)
                         ++   ++.+++ .|+++|++.+..++...+++.|++| |+|++++++.+.+..+|.++++.++..+.        +.
T Consensus       112 ~~~~~~~~~~~l~~-~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~  190 (479)
T PRK10077        112 IGPDNTGYVPEFVI-YRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNT  190 (479)
T ss_pred             ccccchhHHHHHHH-HHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence               12   344555 5999999999999999999999995 88999999999999999999877766543        34


Q ss_pred             hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccC
Q psy15069        139 YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVI  218 (461)
Q Consensus       139 ~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (461)
                      +|||+.|++.++..++..+.. ++.|+.  |++..++ +.           +++.+...+.                  .
T Consensus       191 ~gWr~~f~~~~~~~~~~~~~~-~~l~~s--~~~l~~~-~~-----------~~~~~~~~~~------------------~  237 (479)
T PRK10077        191 DGWRYMFASEAIPALLFLMLL-YFVPET--PRYLMSR-GK-----------QEQAEGILRK------------------I  237 (479)
T ss_pred             CChHHHHHHHHHHHHHHHHHH-HcCCCC--cHHHHHc-CC-----------HHHHHHHHHH------------------H
Confidence            699999998887777665443 334433  2210000 00           0000000000                  0


Q ss_pred             CccccccccCCCCCCCCcccccccccCCchhhhhHh--hhhccccccch--hHHH-HHHHHHHHhhccccchhhHhhHHH
Q psy15069        219 STQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLR--EMLDMELLRDP--IFIL-FTISNIFTSIGFNVPYVYIVKLAE  293 (461)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  293 (461)
                               +    ++++.++.     .++.+...+  +......+...  .+.. .....+....+++....+.|.+.+
T Consensus       238 ---------~----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~  299 (479)
T PRK10077        238 ---------M----GNTLATQA-----LQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFK  299 (479)
T ss_pred             ---------c----CChhHHHH-----HHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHH
Confidence                     0    00000000     000000000  00000111111  0111 112223333444455667788888


Q ss_pred             HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh--hh-H-HHHHHHHHHHhhhh
Q psy15069        294 QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC--YN-Y-VELAIYAGVFGAMI  369 (461)
Q Consensus       294 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~~l~g~~~  369 (461)
                      +.|++.....+.....++..+++.++.++++||+++|+..  ..+.++.+++.+++...  .+ . .......++++++.
T Consensus       300 ~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~--i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  377 (479)
T PRK10077        300 TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ--IIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF  377 (479)
T ss_pred             HcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH--HHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence            8999988788887888899999999999999997655443  34444444444333221  11 1 12233444455444


Q ss_pred             hh-HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceee------eeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        370 GA-YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG------FLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       370 ~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g------~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      +. ..+..+.++.|.+|+++|+++.|+.+....++.++++.+.+      ++.|..+ +...|++.+++.+++++..+..
T Consensus       378 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  456 (479)
T PRK10077        378 AMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMWKF  456 (479)
T ss_pred             hccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHHHHHHHHHhc
Confidence            43 34677889999999999999999999999999888855544      4556654 6778888787777776665544


Q ss_pred             H
Q psy15069        443 P  443 (461)
Q Consensus       443 ~  443 (461)
                      .
T Consensus       457 ~  457 (479)
T PRK10077        457 V  457 (479)
T ss_pred             c
Confidence            3

>PRK15075 citrate-proton symporter; Provisional

Probab=99.97  E-value=9.3e-31  Score=260.99  Aligned_cols=335  Identities=16%  Similarity=0.171  Sum_probs=231.3

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHH-HHHH-----HhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhh-
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIA-SILV-----GVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVIT-   78 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~-s~~~-----~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~-   78 (461)
                      .+++..|.+.++++.++.+.+... +...     +...+++++.|.+.||+|||++++.+.++.+++.++++++++++. 
T Consensus        33 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~  112 (434)
T PRK15075         33 LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATI  112 (434)
T ss_pred             HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence            467889999999999988875443 3322     222467899999999999999999999999999999999999874 


Q ss_pred             -------HHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--------Hhhchh
Q psy15069         79 -------LCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--------REYGWK  142 (461)
Q Consensus        79 -------l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~~gw~  142 (461)
                             +++ .|+++|++.+..++....++.+++| ++|++++++...+.++|..+++.++..+.        +.+|||
T Consensus       113 ~~~~~~~l~~-~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr  191 (434)
T PRK15075        113 GLAAPLLVLL-GRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWR  191 (434)
T ss_pred             HHHHHHHHHH-HHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchH
Confidence                   344 5999999999999888889999995 88999999999988888888888777763        468999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccc
Q psy15069        143 ITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQA  222 (461)
Q Consensus       143 ~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (461)
                      ++|++..... ..   .++.+...  |++++..                                             + 
T Consensus       192 ~~f~~~~~~~-~~---~~~~~~~~--~e~~~~~---------------------------------------------~-  219 (434)
T PRK15075        192 IPFLIGCLIV-PF---IFLIRRSL--EETEEFL---------------------------------------------A-  219 (434)
T ss_pred             HHHHHHHHHH-HH---HHHHHHhc--CCCHHHH---------------------------------------------H-
Confidence            9998743322 11   11121111  1100000                                             0 


Q ss_pred             cccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHH-HHHHHHHhhccccchhhHhhHHHH-hCCCch
Q psy15069        223 QIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILF-TISNIFTSIGFNVPYVYIVKLAEQ-RGVTRS  300 (461)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~  300 (461)
                                  ++++        .+.++..+     ...++++.+.. .+..++....++....|.|.|+++ .|++..
T Consensus       220 ------------~~~~--------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~  274 (434)
T PRK15075        220 ------------RKHR--------PSMREIFR-----SLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAA  274 (434)
T ss_pred             ------------hhhc--------cccccHHH-----HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence                        0000        00000011     12344444433 333444555667788899999954 799999


Q ss_pred             hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH-HHHH---hhhhhhHHHHHHHHHHHhhhhhhHHHHH
Q psy15069        301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA-ATVI---CAFCYNYVELAIYAGVFGAMIGAYVGLT  376 (461)
Q Consensus       301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~l~g~~~~~~~~~~  376 (461)
                      +.++...+..++.++++++.|+++||+++|+..+..  ..+..+ ....   ....++.........+.+++.+...+..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  352 (434)
T PRK15075        275 DSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAF--TVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAM  352 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH--HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhH
Confidence            999888889999999999999999998766544322  111111 1111   1112233333344455666777666777


Q ss_pred             HHHHHHhcCccchhHHHHHHHHHHH-hhhhhccceeeeeecccCC
Q psy15069        377 SVILVDLLGLDRLTNAFGLLLLFQG-IASLVGPPIAGFLYDSTLS  420 (461)
Q Consensus       377 ~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~gp~i~g~l~~~~g~  420 (461)
                      ..++.|.+|++.|+++.|+.+.... +++.++|.+.|++.|+.|.
T Consensus       353 ~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~  397 (434)
T PRK15075        353 VVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD  397 (434)
T ss_pred             HHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence            7788999999999999999655544 4688899999999998873

>TIGR00898 2A0119 cation transport protein

Probab=99.97  E-value=7.5e-32  Score=274.45  Aligned_cols=389  Identities=15%  Similarity=0.170  Sum_probs=265.0

Q ss_pred             CCcceeeeeehHHHHhHhcCC---CccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchh
Q psy15069          1 DGVTYSFGILFIEFTKVFQEG---DGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVI   77 (461)
Q Consensus         1 ~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~   77 (461)
                      ||..|.++.+.|.+.+|++++   +.+.+++.+++.+++.+++++.|.+.||+|||++++.+.++.+++.+++++++|++
T Consensus       102 ~~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~  181 (505)
T TIGR00898       102 DGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYT  181 (505)
T ss_pred             CCcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHH
Confidence            345566668889999999999   89999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHH
Q psy15069         78 TLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAV  156 (461)
Q Consensus        78 ~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~  156 (461)
                      .+++. |++.|++.+...+....++.+++| ++|+++.++...+..+|.+++|.++..+.   +||+.|++.++..++..
T Consensus       182 ~~~~~-r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~  257 (505)
T TIGR00898       182 VFLVF-RLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTFLFF  257 (505)
T ss_pred             HHHHH-HHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHH
Confidence            99985 999999999999999999999995 78999999999999999999888876554   49999999998877766


Q ss_pred             HHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCc
Q psy15069        157 LFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESEST  236 (461)
Q Consensus       157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (461)
                      +..+ +.|+  +|++...+.+            .++..+..+.                  .     .+.++.+ ..++.
T Consensus       258 ~~~~-~~~e--sp~~l~~~~~------------~~~a~~~l~~------------------~-----~~~~~~~-~~~~~  298 (505)
T TIGR00898       258 LLSW-FVPE--SPRWLISQGR------------IEEALKILQR------------------I-----AKINGKK-LPAEV  298 (505)
T ss_pred             HHHH-hcCC--ChHHHHHCCC------------HHHHHHHHHH------------------H-----HHHcCCC-CCHHH
Confidence            5553 3343  2221000000            0000000000                  0     0000000 00000


Q ss_pred             ccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhh
Q psy15069        237 EDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVS  316 (461)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g  316 (461)
                      .+  ...  .++.+...++....+++++|.++...+...+..+........++.+.++.+.+.   .......++..+++
T Consensus       299 ~~--~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~  371 (505)
T TIGR00898       299 LS--LSL--EKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNI---YLDLFISGLVELPA  371 (505)
T ss_pred             Hh--hhh--hhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCh---HHHHHHHHHHHHHH
Confidence            00  000  000000000011124677887766555544433333222223333345555543   23344567778889


Q ss_pred             hhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhH--HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHH
Q psy15069        317 RVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNY--VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFG  394 (461)
Q Consensus       317 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  394 (461)
                      .++.+++.||+|+|+.  +..+.++.+++.++..+.++.  +......++.+++.+..++..+.+..|.+|++.|+++.|
T Consensus       372 ~~~~~~l~dr~grr~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g  449 (505)
T TIGR00898       372 KLITLLLIDRLGRRYT--MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVG  449 (505)
T ss_pred             HHHHHHHHHHhCCHHH--HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHh
Confidence            9999999999765443  334555555555555554432  445555666777777778888899999999999999999


Q ss_pred             HHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        395 LLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       395 ~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      +.+....+|++++|.+.+ +.+ . ++...+.+.+++.+++.++.+++++
T Consensus       450 ~~~~~~~ig~~i~p~i~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~lpe  496 (505)
T TIGR00898       450 VCSTMARVGSIISPFLVY-LGE-K-WLFLPLVLFGGLALLAGILTLFLPE  496 (505)
T ss_pred             HHHHHHHHHHHHHhHHHH-HHH-H-HHhhHHHHHHHHHHHHHHHHHcCcC
Confidence            999999999999999998 433 3 3667777777777777777666654

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.97  E-value=4e-30  Score=251.91  Aligned_cols=332  Identities=13%  Similarity=0.108  Sum_probs=248.9

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      .+...+|++.+++|.++.+.+++.+++.++..+++++.|.+.||+|||+++..+.++.+++.+++.++++++.+++. |+
T Consensus         9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~   87 (377)
T PRK11102          9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM-RF   87 (377)
T ss_pred             HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HH
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999998875 89


Q ss_pred             cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +.|++.+...+....++.+++| ++|++++++.+.+..+|..++|++++.+.+..|||+.|++.++++++..++..+..|
T Consensus        88 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (377)
T PRK11102         88 LHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIP  167 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999888888889999985 779999999999999999999999999999899999999998888777665555444


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      +++.++ ++++                                                          .+         
T Consensus       168 ~~~~~~-~~~~----------------------------------------------------------~~---------  179 (377)
T PRK11102        168 ETLPKE-RRQP----------------------------------------------------------FH---------  179 (377)
T ss_pred             ccCccc-ccCC----------------------------------------------------------CC---------
Confidence            321111 0000                                                          00         


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                       .++..+..     .+.+++|.++...+..++...+.+.+..+.|.+. ++.|.++.+.+.......++.++++++.|++
T Consensus       180 -~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l  253 (377)
T PRK11102        180 -LRTTIRNF-----ASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRF  253 (377)
T ss_pred             -hHHHHHHH-----HHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             00000111     1357788887777776666666666777777777 6689999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHH-HHHHHHHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH-
Q psy15069        324 SDRPCVNRLYIYNGCL-AICGAATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ-  400 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-  400 (461)
                      .||+++++.......+ .+.++.++.....+ +.+...+...+++.+.+...+.....+.|..| ++++++.++.+... 
T Consensus       254 ~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~  332 (377)
T PRK11102        254 VRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRF  332 (377)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHH
Confidence            9997655544332221 22233333222222 34444444445555555555555566677766 78899999987764 


Q ss_pred             Hhhhhhccceeee
Q psy15069        401 GIASLVGPPIAGF  413 (461)
Q Consensus       401 ~~g~~~gp~i~g~  413 (461)
                      .+|..+++.+.+.
T Consensus       333 ~~g~~~g~~~~~~  345 (377)
T PRK11102        333 GIGAIVGALLSLA  345 (377)
T ss_pred             HHHHHHHHHHHhc
Confidence            4777777776543

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.97  E-value=5.3e-30  Score=233.97  Aligned_cols=353  Identities=16%  Similarity=0.162  Sum_probs=283.4

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      .+.|.+.+++.+|+|+|.++.|++.+++.++..+.+|++.++.+|+|.++.+.+++++.+++.++-... +.+.++.. -
T Consensus        29 tsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~g-t  106 (395)
T COG2807          29 TSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLG-T  106 (395)
T ss_pred             hhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHH-H
Confidence            567899999999999999999999999999999999999999999999999999999999999998776 55555554 4


Q ss_pred             ccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      .+.|.|.+...+..+.++.++||||-+..+|++....++|..+++.+.-.+.+.. |||..+.+.+.++++..+.++...
T Consensus       107 ~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~  186 (395)
T COG2807         107 LLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA  186 (395)
T ss_pred             HHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc
Confidence            7889999999999999999999999999999999999999888888888888777 799999999999888776655432


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      ..++.+. ++.                                                                     
T Consensus       187 ~r~~~~~-~~~---------------------------------------------------------------------  196 (395)
T COG2807         187 LREQAAS-IAT---------------------------------------------------------------------  196 (395)
T ss_pred             ccccccc-ccc---------------------------------------------------------------------
Confidence            1110000 000                                                                     


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                             .   .....++.|+|.-|.+.+.+.+++..+|....|+|.++.|.|+|..++|.+.+...+.++...+....+
T Consensus       197 -------~---~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~l  266 (395)
T COG2807         197 -------K---LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLL  266 (395)
T ss_pred             -------c---cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence                   0   000114789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHHh
Q psy15069        324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQGI  402 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~  402 (461)
                      .+|...+|.. .......+.+++..+.+.+.. ..+..+++.|++.|..+++...++.+..+ +++.++-.|+.+.++++
T Consensus       267 a~R~~n~r~~-~~~~~~~~l~G~~G~~~~P~~-~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYl  344 (395)
T COG2807         267 ARRSKNQRPL-VVLALLLMLVGLVGLLLAPGQ-LPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYL  344 (395)
T ss_pred             HHHhcccchH-HHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHH
Confidence            9985333333 323333333333333343322 12223689999999999999988877765 45566677888888888


Q ss_pred             hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        403 ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       403 g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      -..+||.+.|++.|.+|||+..++..+...++..+.-+.
T Consensus       345 lAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~  383 (395)
T COG2807         345 LAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLR  383 (395)
T ss_pred             HHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence            889999999999999999999998877777666655543

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.97  E-value=8.8e-30  Score=249.79  Aligned_cols=342  Identities=14%  Similarity=0.033  Sum_probs=255.9

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcc----eeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCR----NVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r----~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      .++|.+.+|+|.|..++|++.+++.+...+++|+.|++.||+|||    +.+..+..+.  .......++++|.+++. |
T Consensus        25 p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~-~  101 (382)
T PRK11128         25 PFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVA-I  101 (382)
T ss_pred             hhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHH-H
Confidence            345578999999999999999999999999999999999999983    3333222222  22334456889998874 8


Q ss_pred             ccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      ++.|++.+...+...++..++ .++|+++++......++|..++|++++.+.+.+|||.+|++.++..+...+ ..+..|
T Consensus       102 ~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~  179 (382)
T PRK11128        102 GLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRP  179 (382)
T ss_pred             HHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccC
Confidence            999998888888776665554 677899999999999999999999999999999999999887765444333 233333


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      +++ +++++++                                                            +.       
T Consensus       180 ~~~-~~~~~~~------------------------------------------------------------~~-------  191 (382)
T PRK11128        180 TIM-PQGESRQ------------------------------------------------------------QE-------  191 (382)
T ss_pred             CCC-Ccccccc------------------------------------------------------------cc-------
Confidence            221 1100000                                                            00       


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYIS  324 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~  324 (461)
                        ++.+.+.     ++++|+|.+|...+..++..........+.|.|+++.|.+..+.+.+.+...++.++..++.|++.
T Consensus       192 --~~~~~~~-----~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~  264 (382)
T PRK11128        192 --SAGWPAW-----KALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLF  264 (382)
T ss_pred             --ccccchH-----HHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              0000111     246889999988887777777777788888999988999999999999999999999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH-HHHHhh
Q psy15069        325 DRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL-LFQGIA  403 (461)
Q Consensus       325 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g  403 (461)
                      ||++.++.  +..+.+..++..+...+.++.+.+++..++.|++.+...+....++.+. +++++++..++.+ ...++|
T Consensus       265 ~r~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g  341 (382)
T PRK11128        265 RRWSARDL--LLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGS  341 (382)
T ss_pred             HHCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHH
Confidence            99654444  4456666666666666778888888889999999998888888888886 5566789999887 445678


Q ss_pred             hhhccceeeeeecccCCchHHHHHHhHHHHHH
Q psy15069        404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVS  435 (461)
Q Consensus       404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~  435 (461)
                      ..+||.++|.++|+.| + ..++..+++.+.+
T Consensus       342 ~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~  371 (382)
T PRK11128        342 IAIMTVLSGFLYQHLG-A-GVFWVMALVALPA  371 (382)
T ss_pred             HHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHH
Confidence            8999999999999986 4 3555555554443

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.97  E-value=4.3e-30  Score=253.34  Aligned_cols=343  Identities=16%  Similarity=0.118  Sum_probs=259.3

Q ss_pred             eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhc---ccchhhHHHHhh
Q psy15069          8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVF---AKNVITLCITIG   84 (461)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~---~~~~~~l~i~~~   84 (461)
                      +++.|++++++|.++.+.|++.+.+.+++.+++++.|++.||+|+|+++..+.++++++.++...   .++++.+++. |
T Consensus        23 ~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~-~  101 (410)
T TIGR00885        23 NPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVG-L  101 (410)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH-H
Confidence            57899999999999999999999999999999999999999999999999999999999988543   4678888874 8


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH--------------------------
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR--------------------------  137 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~--------------------------  137 (461)
                      ++.|+|.+...+.....+.+..| ++|++++++.+...++|..++|.++..+..                          
T Consensus       102 ~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (410)
T TIGR00885       102 FILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSD  181 (410)
T ss_pred             HHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHH
Confidence            99999999999988888888774 779999999999999999999999988753                          


Q ss_pred             hhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCccc
Q psy15069        138 EYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEV  217 (461)
Q Consensus       138 ~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (461)
                      ..+||++|++.+++.++..++..+. +.|+.+++++++                                          
T Consensus       182 ~~~w~~~fl~~a~~~~~~~~~~~~~-~~p~~~~~~~~~------------------------------------------  218 (410)
T TIGR00885       182 LASVQTPYMIIGAVVLAVALLIMLT-KMPALNHSDAKQ------------------------------------------  218 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcccccc------------------------------------------
Confidence            2479999999999877665444332 222111100000                                          


Q ss_pred             CCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh--
Q psy15069        218 ISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR--  295 (461)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  295 (461)
                                                   .+.+...     .+++|+|+++...+..++..........+++.|.++.  
T Consensus       219 -----------------------------~~~~~~~-----~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~  264 (410)
T TIGR00885       219 -----------------------------ISFSASL-----SRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIP  264 (410)
T ss_pred             -----------------------------ccchhhH-----HHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence                                         0000011     1357888888888888887777777788999999655  


Q ss_pred             CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHH
Q psy15069        296 GVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGL  375 (461)
Q Consensus       296 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  375 (461)
                      +.+....+...+.......+|+++++++.||++.++  ++.++.++..+..++..+.++... ....++.|++.+..+|.
T Consensus       265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~--~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~  341 (410)
T TIGR00885       265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK--VLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPT  341 (410)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHH
Confidence            444455566677777888999999999999964444  344455555555555555555433 55677888899999999


Q ss_pred             HHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc-----CCchHHHHHHhHHHH
Q psy15069        376 TSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST-----LSYSPAFFLAGGAIF  433 (461)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~-----g~~~~~f~~~~~~~l  433 (461)
                      ..++..+..+++....+.++....  +|++++|++.|++.|..     |+++..|++...+.+
T Consensus       342 i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~  402 (410)
T TIGR00885       342 IYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA  402 (410)
T ss_pred             HHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence            999999999866544455544443  99999999999999954     467778876544433

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.97  E-value=1.1e-29  Score=250.01  Aligned_cols=347  Identities=13%  Similarity=0.098  Sum_probs=240.1

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceee-ehhhHHHHHHHHHhhcccchhhHHHHhhcccc
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVT-ICGAILGSACLAVSVFAKNVITLCITIGFGTG   88 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~-~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G   88 (461)
                      +-+++.+++|.+.+++|++.+...+...+.+++.+.+.||+|+|+.+ ..+.++.+++..+.+++++++.+++..+++.|
T Consensus        38 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  117 (393)
T PRK15011         38 LSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSS  117 (393)
T ss_pred             HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            34456788999999999998876554444444554459999999874 56666667788888899999988765344444


Q ss_pred             ccccccchhHHHHHHhhhh-ccc--hhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         89 LGFGLIYLPAIVSVTCYFE-RLR--SLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        89 ~g~~~~~~~~~~~~~~~f~-~~r--g~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      .+ +...+....+..++.+ ++|  +..+++.+++.++|.+++|++++.+.+.+|||.+|++.++.+++..+..++..|+
T Consensus       118 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~  196 (393)
T PRK15011        118 FG-STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPS  196 (393)
T ss_pred             HH-HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCc
Confidence            43 4455666666666654 333  3445788899999999999999999999999999999998887776665555554


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      .+.+++  ..                                                         +++.         
T Consensus       197 ~~~~~~--~~---------------------------------------------------------~~~~---------  208 (393)
T PRK15011        197 MRKELP--LA---------------------------------------------------------TGTL---------  208 (393)
T ss_pred             cCCCCc--cc---------------------------------------------------------cccc---------
Confidence            321110  00                                                         0000         


Q ss_pred             CchhhhhHhhhhccccccc-hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        246 SDDTKQTLREMLDMELLRD-PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       246 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                       +   .         ..++ +..+......++.....+.+..+.|.|+ +++|++..+.+.+.+...+..++++++.|++
T Consensus       209 -~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l  275 (393)
T PRK15011        209 -E---A---------PRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYF  275 (393)
T ss_pred             -c---c---------cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             0   0         0011 1122222333333344455567899888 6689999999998888888889999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069        324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA  403 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  403 (461)
                      +||+++|+...  .+.....+.+......++.+...+..++.+++.+...+..+....|.+| ++++++.++.+...++|
T Consensus       276 ~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg  352 (393)
T PRK15011        276 AKRLGKRFLMR--VAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVG  352 (393)
T ss_pred             HHHhChHHHHH--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHH
Confidence            99987665433  3333333333333345566666666666777777666666777889888 56899999999999999


Q ss_pred             hhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      ..+||.++|.+.|..| |+..|.+.+++.+++.+..+..
T Consensus       353 ~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~  390 (393)
T PRK15011        353 WIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRI  390 (393)
T ss_pred             HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999875 9999988887777777666544

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.97  E-value=1.4e-30  Score=256.14  Aligned_cols=351  Identities=18%  Similarity=0.192  Sum_probs=253.2

Q ss_pred             eeeeeehHHHHhHhc--CCCccHHHHHHHH-----HHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchh
Q psy15069          5 YSFGILFIEFTKVFQ--EGDGVTSWIASIL-----VGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVI   77 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~--~~~~~~~~~~s~~-----~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~   77 (461)
                      +.++...+.+.+++.  .++++.+.+.+..     .+...+++++.|++.||+|||+++..+.++..++.++++++++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~   89 (394)
T TIGR00883        10 YLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYA   89 (394)
T ss_pred             HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChh
Confidence            456667777777754  5566676655543     333356889999999999999999999999999999999999876


Q ss_pred             h--------HHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHH--------Hhhc
Q psy15069         78 T--------LCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTV--------REYG  140 (461)
Q Consensus        78 ~--------l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~~g  140 (461)
                      .        +++ .|+++|++.+...+....++.+++ +|+|++++++.+.+..+|.++++.+...+.        +.+|
T Consensus        90 ~~~~~~~~~~~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~  168 (394)
T TIGR00883        90 TIGIWAPILLLL-ARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWG  168 (394)
T ss_pred             hhHHHHHHHHHH-HHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccc
Confidence            3        444 599999999999999999999999 588999999999999999999998887664        3579


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCc
Q psy15069        141 WKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVIST  220 (461)
Q Consensus       141 w~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (461)
                      ||+.|++.+++.++...+.... ++  .++++++++                                            
T Consensus       169 w~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~--------------------------------------------  201 (394)
T TIGR00883       169 WRIPFLVSAVLVLIGLYLRRNL-EE--TPVFEKAQE--------------------------------------------  201 (394)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc-CC--ChhHHHHHh--------------------------------------------
Confidence            9999988776655443322221 21  111000000                                            


Q ss_pred             cccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchh--HHHHHHHHHHHhhccccchhhHhhHH-HHhCC
Q psy15069        221 QAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPI--FILFTISNIFTSIGFNVPYVYIVKLA-EQRGV  297 (461)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~  297 (461)
                                  ++++            .+.+.+     +.+++++  ++...+..++.....+....++|.|+ ++.|.
T Consensus       202 ------------~~~~------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  252 (394)
T TIGR00883       202 ------------KHKK------------KRGPIR-----ETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGL  252 (394)
T ss_pred             ------------cccc------------ccCCHH-----HHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence                        0000            000111     1233433  66666667777777777888999999 77899


Q ss_pred             CchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH-HHHhhh--hhhHHHHHHHHHHHhhhhhhHHH
Q psy15069        298 TRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA-TVICAF--CYNYVELAIYAGVFGAMIGAYVG  374 (461)
Q Consensus       298 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~  374 (461)
                      +..+.+.......++.++++++.|+++||+++|+.... .+....... .+....  .++.+......++.|++.+...+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  331 (394)
T TIGR00883       253 SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII-FTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTG  331 (394)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH-HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999875554332 222111111 111112  23555666667788888888888


Q ss_pred             HHHHHHHHhcCccchhHHHHHH-HHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHH
Q psy15069        375 LTSVILVDLLGLDRLTNAFGLL-LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF  433 (461)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l  433 (461)
                      ...+.+.|.+|+++|+++.++. +....+|..++|.+.|++.|+.|.|...++...+..+
T Consensus       332 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l  391 (394)
T TIGR00883       332 PMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL  391 (394)
T ss_pred             hHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence            9999999999999999999985 4556688889999999999998777777766655444

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10133 L-fucose transporter; Provisional

Probab=99.97  E-value=6.9e-30  Score=254.05  Aligned_cols=348  Identities=15%  Similarity=0.112  Sum_probs=255.8

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hcccchhhHHHHh
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFAKNVITLCITI   83 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~~~~~~l~i~~   83 (461)
                      .+.+.|++++++|.++.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++   .++++++.+++. 
T Consensus        45 ~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~-  123 (438)
T PRK10133         45 NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVG-  123 (438)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH-
Confidence            4567899999999999999999999999999999999999999999999999999999999875   578899999885 


Q ss_pred             hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH------------------h------
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR------------------E------  138 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~------------------~------  138 (461)
                      |+++|+|.+...+.....+.++.+ ++|.+.+++.+...++|..++|.++..+..                  .      
T Consensus       124 r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~  203 (438)
T PRK10133        124 LFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHS  203 (438)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHH
Confidence            999999999999999888888775 445567999999999999999988776541                  0      


Q ss_pred             --hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcc
Q psy15069        139 --YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTE  216 (461)
Q Consensus       139 --~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (461)
                        .+||++|+....+.....++..+ ++.++.+++ +++                                         
T Consensus       204 ~~~~w~~~f~~~~~v~~~~~~~~~~-~~~p~~~~~-~~~-----------------------------------------  240 (438)
T PRK10133        204 LVLSVQTPYMIIVAIVLLVALLIML-TKFPALQSD-NHS-----------------------------------------  240 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCcc-ccc-----------------------------------------
Confidence              36777776544433333222222 222211110 000                                         


Q ss_pred             cCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-H-H
Q psy15069        217 VISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-E-Q  294 (461)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~  294 (461)
                                       ++++         .+..+..     ++++|+|.++...+..++.....+....|.+.|+ + .
T Consensus       241 -----------------~~~~---------~~~~~~~-----~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~  289 (438)
T PRK10133        241 -----------------DAKQ---------GSFSASL-----SRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEI  289 (438)
T ss_pred             -----------------cccc---------cchhhhH-----HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence                             0000         0000111     1357888888777777777777777778888885 4 5


Q ss_pred             hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHH
Q psy15069        295 RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVG  374 (461)
Q Consensus       295 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  374 (461)
                      .|+++.+++..+..+.++.++|+++.|++.||+++++...  .+..+..+.+++..+.++. ..+....+.|++.+..+|
T Consensus       290 ~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~--~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P  366 (438)
T PRK10133        290 PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLA--AYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYP  366 (438)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH--HHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999999976555443  3333333333333334443 234567789999999999


Q ss_pred             HHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHH
Q psy15069        375 LTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFV  434 (461)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~  434 (461)
                      ...+...+..|+ +.+++.++.. ...+|+.++|.+.|.+.|..|+.+..|++..+..+.
T Consensus       367 ~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~  424 (438)
T PRK10133        367 TIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV  424 (438)
T ss_pred             HHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence            999999998874 5678888886 455789999999999999876456677654444333

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.97  E-value=4.5e-29  Score=245.32  Aligned_cols=355  Identities=14%  Similarity=0.036  Sum_probs=256.9

Q ss_pred             eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069          8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT   87 (461)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~   87 (461)
                      .+..+.+.++++.+..+.+++.+.+.+.+.+++|+.|++.||+|||++++.+.++..++.+++.++.+.   ++ .|+++
T Consensus        23 ~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~-~r~l~   98 (393)
T PRK11195         23 LFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LL-AYGLV   98 (393)
T ss_pred             HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HH-HHHHH
Confidence            345677889999999999999999999999999999999999999999999999999988887776664   44 48999


Q ss_pred             cccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15069         88 GLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLE  166 (461)
Q Consensus        88 G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~  166 (461)
                      |++.+...|+..+++.+++| |+|++++|+.....++|.+++|++++.+.+. .|+.++.+.+...+...+. .+..|++
T Consensus        99 G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~-~~~l~~~  176 (393)
T PRK11195         99 GIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALF-NLFIPRL  176 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HhcCCCC
Confidence            99999999999999999995 8899999999999999999999999999884 5888887776654444332 3333332


Q ss_pred             CCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCC
Q psy15069        167 EQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLS  246 (461)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (461)
                      +.++  +..                                                          +++.. ..    .
T Consensus       177 ~~~~--~~~----------------------------------------------------------~~~~~-~~----~  191 (393)
T PRK11195        177 GARR--PGQ----------------------------------------------------------SWNPI-AL----L  191 (393)
T ss_pred             cccc--ccc----------------------------------------------------------CCCHH-HH----H
Confidence            1110  000                                                          00000 00    0


Q ss_pred             chhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069        247 DDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISD  325 (461)
Q Consensus       247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d  325 (461)
                      ++.+...     +.++++|.+.......++...........+|.++ +.+|.++.+.|++.+..+++.++++++.+++.|
T Consensus       192 ~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~  266 (393)
T PRK11195        192 RDFFHAC-----RVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVT  266 (393)
T ss_pred             HHHHHHH-----HHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            0000111     1346677665544444333444444555666777 567999999999999999999999999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc-hhHHHHHHHHHHHhhh
Q psy15069        326 RPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR-LTNAFGLLLLFQGIAS  404 (461)
Q Consensus       326 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~  404 (461)
                      |.+.++...  .++ ..++..+...+.++.+...+..++.|++.+...+...+.+.+..|++. +|++.++.++..+++.
T Consensus       267 ~~~~~~~~~--~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~  343 (393)
T PRK11195        267 LETVLRVLP--AGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAM  343 (393)
T ss_pred             CCcccchHH--HHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHH
Confidence            865444333  333 233333344455666666677778899888877777777888766554 7999999999999999


Q ss_pred             hhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        405 LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       405 ~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      .++..+.+.+ +..| -+..+++.+...+.++.+....+
T Consensus       344 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~  380 (393)
T PRK11195        344 LLMLGLYSLL-VKLG-VPVVAVIVGFGLLVALAMALLWR  380 (393)
T ss_pred             HHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998855 5554 66677666666666655554443

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.97  E-value=2.5e-29  Score=247.73  Aligned_cols=330  Identities=17%  Similarity=0.116  Sum_probs=253.0

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      +...+|++.+++|.|+.+.+++.+++.+++.+++++.|++.||+|||+++..+.++..++.++..++++++.+++. |++
T Consensus        27 ~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~  105 (394)
T PRK11652         27 YVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAA-SAI  105 (394)
T ss_pred             HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HHH
Confidence            4456899999999999999999999999999999999999999999999999999999999999999999999885 899


Q ss_pred             ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      .|++.+...+.......++++ ++|++++++...+..++..++|++++.+.+..|||+.|++.++..++..+...+..|+
T Consensus       106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~  185 (394)
T PRK11652        106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE  185 (394)
T ss_pred             HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999988777777777778774 7899999999999999999999999999988899999999888776655544444333


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      ++..+  +++                                                                      
T Consensus       186 ~~~~~--~~~----------------------------------------------------------------------  193 (394)
T PRK11652        186 TRPAD--ARR----------------------------------------------------------------------  193 (394)
T ss_pred             cCccc--cch----------------------------------------------------------------------
Confidence            21100  000                                                                      


Q ss_pred             CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069        246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVILGYIS  324 (461)
Q Consensus       246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~  324 (461)
                       .+.+...+     ..+|+|.++...+..+........+..+.+.++++ .|.+..+.+++.....++.++++++.+++.
T Consensus       194 -~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~  267 (394)
T PRK11652        194 -TRVLASYR-----TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPN  267 (394)
T ss_pred             -hHHHHHHH-----HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             00112222     34677777765555555555555555667777754 899999999998888899999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHh
Q psy15069        325 DRPCVNRLYIYNGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGI  402 (461)
Q Consensus       325 dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  402 (461)
                      ||.+ ++......++.+..+.......  ..+.+.+....++.|++.+...+.......+.+| ++++++.++.+....+
T Consensus       268 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l  345 (394)
T PRK11652        268 KRFS-TLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNI  345 (394)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHH
Confidence            9854 2222222222222222222211  2245566667788899999889999998889887 6789999999999999


Q ss_pred             hhhhccceeeeeecc
Q psy15069        403 ASLVGPPIAGFLYDS  417 (461)
Q Consensus       403 g~~~gp~i~g~l~~~  417 (461)
                      |+.+++.++|.+.+.
T Consensus       346 g~~~~~~~~~~~~~~  360 (394)
T PRK11652        346 GSGLAALLSAMLPQT  360 (394)
T ss_pred             HHHHHHHHHHHccCC
Confidence            999999999988764

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.97  E-value=1.1e-29  Score=252.27  Aligned_cols=358  Identities=14%  Similarity=0.075  Sum_probs=244.7

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hccc----chh-hHH
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFAK----NVI-TLC   80 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~~----~~~-~l~   80 (461)
                      .+..++.+++|++..++|++.+++.+.+.+++++.|++.||+|||++++.+..+..+.....   ..++    +.+ ..+
T Consensus        32 ~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (420)
T PRK09528         32 FFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAI  111 (420)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444566699999999999999999999999999999999999999887666655443211   1111    111 111


Q ss_pred             HHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI  160 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~  160 (461)
                      + .+++.|.+.....+....+. +..++++++++|......++|..++|++++.+.+ .+|+++|++.++++++..++.+
T Consensus       112 ~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~  188 (420)
T PRK09528        112 V-GGIYLGFGFLAGAGAIEAYI-ERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLF  188 (420)
T ss_pred             H-HHHHhhhhhccchhhhhhHH-HHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHh
Confidence            1 13334433333222222222 2235677889999999999999999999998876 5999999988888776665555


Q ss_pred             hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069        161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (461)
                      +.+++++.++ +.+++                                                         +++++  
T Consensus       189 ~~~~~~~~~~-~~~~~---------------------------------------------------------~~~~~--  208 (420)
T PRK09528        189 FAKPDAPSTA-KVANA---------------------------------------------------------LGANA--  208 (420)
T ss_pred             cccccccchh-hhccc---------------------------------------------------------hhccc--
Confidence            5444321111 00000                                                         00000  


Q ss_pred             ccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH----hCCCchhhHHHHHHHhhhhhhh
Q psy15069        241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ----RGVTRSNASSLISIVGAANMVS  316 (461)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~g  316 (461)
                          ++... +..     .+.+|+|.++.+.+..++....+.....+.|.|+.+    .+.+..+.+.+.++..++..++
T Consensus       209 ----~~~~~-~~~-----~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  278 (420)
T PRK09528        209 ----SAVSL-KDA-----LALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALI  278 (420)
T ss_pred             ----ccccH-HHH-----HHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Confidence                00000 111     135778887766555544444444445566766632    3566678899999999999999


Q ss_pred             hhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH-
Q psy15069        317 RVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL-  395 (461)
Q Consensus       317 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-  395 (461)
                      .++.|++.||+++++...  .+..+.++..++..+.++.+.++...++.|++.+...+....++.+.+|++.+++..+. 
T Consensus       279 ~~~~g~l~dr~g~~~~~~--~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  356 (420)
T PRK09528        279 MFFAPFIINRIGAKNALL--LAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVG  356 (420)
T ss_pred             HHHHHHHHHHhCcchhhH--HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeeh
Confidence            999999999987665543  44445555656666777888887778888888877777777888999999998888766 


Q ss_pred             HHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        396 LLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       396 ~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      .++...+|.+++|.+.|++.|..| |+..|...+++.++..++.+..
T Consensus       357 ~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~  402 (420)
T PRK09528        357 FQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFT  402 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHH
Confidence            677788999999999999999876 9999999888877666555443

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.97  E-value=5.8e-30  Score=259.84  Aligned_cols=392  Identities=16%  Similarity=0.122  Sum_probs=245.6

Q ss_pred             eeehHHHHhHh-----cCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccc------h
Q psy15069          8 GILFIEFTKVF-----QEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKN------V   76 (461)
Q Consensus         8 ~~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~------~   76 (461)
                      +...|.+.+++     +.++.+.+++.+...+++.+++++.|++.||+|||+++.++.++..++.++++++++      +
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  115 (502)
T TIGR00887        36 SLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVM  115 (502)
T ss_pred             HHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHH
Confidence            44456555542     345667899999999999999999999999999999999999999999998888766      5


Q ss_pred             hhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH------------------
Q psy15069         77 ITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR------------------  137 (461)
Q Consensus        77 ~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~------------------  137 (461)
                      +.+++ .|+++|++.+..++....++.+++| |+|++++++.+....+|.++++.+...+..                  
T Consensus       116 ~~~~~-~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (502)
T TIGR00887       116 ATLCF-WRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGS  194 (502)
T ss_pred             HHHHH-HHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence            66776 5999999999999999999999995 889999999999999999999988876543                  


Q ss_pred             -----hhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC--CcccC-CCCCcccccccccccccccccccccccCCCCCc
Q psy15069        138 -----EYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVE--EPVED-GALPHLRIIIFEVKPKQRALTAVSTSIWQPSTA  209 (461)
Q Consensus       138 -----~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (461)
                           .++||+.|.+.++.+++..+. .++.|+  +|++  ++.++ ++..+.          ..+..+.          
T Consensus       195 ~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpE--Spr~l~~~~~~~~~a~~~----------~~~~~~~----------  251 (502)
T TIGR00887       195 CVPAVDYMWRILIGFGAVPALLALYF-RLTIPE--TPRYTADVAKDVEQAASD----------MSAVLQV----------  251 (502)
T ss_pred             ccchhcccHHHHHHHHHHHHHHHHHH-HHhCCC--CHHHHHHhCcchHHHHHH----------HHHHhcc----------
Confidence                 247999997766665544433 333444  3442  11110 000000          0000000          


Q ss_pred             CCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhcccc-ccc-hhHHHHHHHHHHHhhccccchhh
Q psy15069        210 ISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMEL-LRD-PIFILFTISNIFTSIGFNVPYVY  287 (461)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~-~~~~~~~~~~~~~~~~~~~~~~~  287 (461)
                             +.+++           .+|.++.+   ++.+..+...++.+.... .+. +..+...+..+...+.++....+
T Consensus       252 -------~~~~~-----------~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~  310 (502)
T TIGR00887       252 -------KIEAE-----------PDEVEKAS---TAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLN  310 (502)
T ss_pred             -------ccccC-----------cccccchh---ccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccc
Confidence                   00000           00000000   000000112222211100 111 12222333444455566778888


Q ss_pred             HhhHHHHhCCCchhhHH------------HHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh--
Q psy15069        288 IVKLAEQRGVTRSNASS------------LISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY--  353 (461)
Q Consensus       288 ~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--  353 (461)
                      .|.++++.|++..+.+.            ...+..++.+++.++.++++||+|+|+..+  .+..+.+++..+..+..  
T Consensus       311 ~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~--~~~~~~~~~~~~l~~~~~~  388 (502)
T TIGR00887       311 QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQL--MGFFILTVLFFVLGFAYNH  388 (502)
T ss_pred             cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHH--HHHHHHHHHHHHHHHHHHh
Confidence            99999888987653221            233345567778899999999987665443  33334343333333211  


Q ss_pred             --hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC---------Cch
Q psy15069        354 --NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL---------SYS  422 (461)
Q Consensus       354 --~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g---------~~~  422 (461)
                        +...+....+...++.....+..+.+..|.+|++.|+++.|+.+....++++++|.+.+.+.|..+         ++.
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  468 (502)
T TIGR00887       389 LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMG  468 (502)
T ss_pred             cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccch
Confidence              111111111111111222345666778999999999999999999999999999999999998532         245


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069        423 PAFFLAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       423 ~~f~~~~~~~l~~~~~~~~~~~~~  446 (461)
                      ..|.+.+++.+++.+..+++|+.+
T Consensus       469 ~~~~i~~~~~~~~~i~~~~lpEt~  492 (502)
T TIGR00887       469 HVLEIFALFMFLGILFTLLIPETK  492 (502)
T ss_pred             HHHHHHHHHHHHHHHHheEeccCC
Confidence            677788877777766665555433

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PTZ00207 hypothetical protein; Provisional

Probab=99.97  E-value=2.1e-29  Score=252.92  Aligned_cols=433  Identities=13%  Similarity=0.043  Sum_probs=289.2

Q ss_pred             CcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc------cc
Q psy15069          2 GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA------KN   75 (461)
Q Consensus         2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~------~~   75 (461)
                      |..|+++++.|++++++|+|..+++++.++.. .++.+++++|++.||+|+|+++.++.+++++++++++++      ++
T Consensus        41 g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s  119 (591)
T PTZ00207         41 SFMYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS  119 (591)
T ss_pred             HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc
Confidence            66789999999999999999999999998854 445678889999999999999999999999999999887      68


Q ss_pred             hhhHHHHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHH
Q psy15069         76 VITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSA  155 (461)
Q Consensus        76 ~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~  155 (461)
                      ++.+++ +|++.|+|.+..++++...+.+|||++||++.|+...+.++|+.+.+++...+.. .+|+..|++++++.+++
T Consensus       120 ~~~l~l-~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv  197 (591)
T PTZ00207        120 VVRLSV-YNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVV  197 (591)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence            999998 4899999999988888888999999999999999999999999887777776655 58999999999999888


Q ss_pred             HHHHhhcccCCCCCCC--CcccCCCCCcc-cccccc----cccccccc--------------------------cccc--
Q psy15069        156 VLFGILLRPLEEQPVE--EPVEDGALPHL-RIIIFE----VKPKQRAL--------------------------TAVS--  200 (461)
Q Consensus       156 ~i~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~----~~~~~~~~--------------------------~~~~--  200 (461)
                      .++.+++.++++.+.+  ++.+.+..++. +...++    ++...+..                          .++.  
T Consensus       198 ~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~  277 (591)
T PTZ00207        198 GILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKV  277 (591)
T ss_pred             HHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence            7776665555543332  11100000000 000000    00000000                          0000  


Q ss_pred             --c--cc---CCCC-CcCCCCCc-----ccCCccccccccCCCCCCCCcccccc-cccCCchhhhhHhhhhccccccchh
Q psy15069        201 --T--SI---WQPS-TAISTGPT-----EVISTQAQIDSKATVPESESTEDKTT-CLNLSDDTKQTLREMLDMELLRDPI  266 (461)
Q Consensus       201 --~--~~---~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~  266 (461)
                        .  ..   -.-+ --.+.+..     ++.++.++.  .+.+...+..+++.. +.++.+..+....+ .-++.+++..
T Consensus       278 ~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-t~~q~l~~~d  354 (591)
T PTZ00207        278 GFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAK--EHVEAGEEVSAAEDKVVETDVDYIAPQFQE-TFIEGLKTAR  354 (591)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHhccCCcCCCcccccc--ccccccccccccccccccccccCCCCCCcc-hHHHHHhchh
Confidence              0  00   0000 00000000     000000000  000000000000000 00000000000000 2234578889


Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHh-CCCchh--hHHHHHHHhhhhhhhhhhhhhccC----CCC---cchhHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQR-GVTRSN--ASSLISIVGAANMVSRVILGYISD----RPC---VNRLYIYN  336 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~--~~~~~~~~~~~~~~g~~~~g~l~d----r~~---~~~~~~~~  336 (461)
                      +|+++..+++....-..+...+..+.+.+ |.+.+.  ...+.++.++.+.+||+..|.+..    |..   ..|...+.
T Consensus       355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~  434 (591)
T PTZ00207        355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALF  434 (591)
T ss_pred             HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHH
Confidence            99999999999888888888888888888 773433  333788999999999999999882    211   22233333


Q ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhc-cceeeeee
Q psy15069        337 GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVG-PPIAGFLY  415 (461)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g-p~i~g~l~  415 (461)
                      +..+ +.+..+++.+.-....+++..++.|++.|..+++...++.|+|+ ++.|+-+.+.....-+|..+- ..++|.+|
T Consensus       435 ~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Y  512 (591)
T PTZ00207        435 IPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWY  512 (591)
T ss_pred             HHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHH
Confidence            3333 33433333333222578899999999999999999999999999 999999999999999998886 78899999


Q ss_pred             ccc----CC--------chHHHHHHhHHHHHHHHHHHHH
Q psy15069        416 DST----LS--------YSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       416 ~~~----g~--------~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      |+-    |+        ++..|++.+++++++.++...+
T Consensus       513 d~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l  551 (591)
T PTZ00207        513 TQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV  551 (591)
T ss_pred             HHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence            752    22        7889999999999888876554

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.97  E-value=9.2e-30  Score=248.28  Aligned_cols=332  Identities=15%  Similarity=0.127  Sum_probs=237.2

Q ss_pred             eeeeeehHH-HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc-chhhHHHH
Q psy15069          5 YSFGILFIE-FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK-NVITLCIT   82 (461)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~-~~~~l~i~   82 (461)
                      +.++.+.|. +++++|+|+.+.+++.+++.+++.+++++.|.+.||+|||+++..+.++..++.+++++++ +++.+++.
T Consensus        18 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   97 (366)
T TIGR00886        18 FAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLL   97 (366)
T ss_pred             HHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            456778885 8999999999999999999999999999999999999999999999999999999999999 99999875


Q ss_pred             hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh----------hchhHHH-HHHHH
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE----------YGWKITL-LVLSV  150 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~----------~gw~~~f-~i~~~  150 (461)
                       |+++|++.+. +++...++.+++| |+|++++++.....++|..+++.++..+.+.          .+||+.| ++.++
T Consensus        98 -~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~  175 (366)
T TIGR00886        98 -RLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAG  175 (366)
T ss_pred             -HHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHH
Confidence             8999998664 5666778899995 7899999999877777777777776665542          3899999 44455


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCC
Q psy15069        151 TVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATV  230 (461)
Q Consensus       151 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (461)
                      +.++..++.+...++.+.+++++.+.+  .                                               +..
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------------------------------------------~~~  206 (366)
T TIGR00886       176 ILLLPALLIFFVGADTPPGKPATGKLS--F-----------------------------------------------KGA  206 (366)
T ss_pred             HHHHHHHHHHHhcccCCcccccchhcc--c-----------------------------------------------ccc
Confidence            555444444443333221110000000  0                                               000


Q ss_pred             CCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHH
Q psy15069        231 PESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIV  309 (461)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~  309 (461)
                        +.+.+        .+.. ..     ..+.+++|+++...+..++.....+.+..+.|.|+ +.+|+++.+.+.+.+..
T Consensus       207 --~~~~~--------~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  270 (366)
T TIGR00886       207 --RWSVG--------TGAL-GD-----QLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLG  270 (366)
T ss_pred             --ccccc--------chhH-HH-----HHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence              00000        0000 01     12357788888888877777777778888999999 56799999999999999


Q ss_pred             hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc
Q psy15069        310 GAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD  387 (461)
Q Consensus       310 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~  387 (461)
                      .+..++++++.|++.||+++++...........+..++.....+  +.+.......+.+++.+...+.....+.+..| +
T Consensus       271 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~  349 (366)
T TIGR00886       271 GLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-R  349 (366)
T ss_pred             HHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-h
Confidence            99999999999999999877666554443333333333333332  44444444445555555555666677778887 7


Q ss_pred             chhHHHHHHHHHHHhhh
Q psy15069        388 RLTNAFGLLLLFQGIAS  404 (461)
Q Consensus       388 ~~~~~~g~~~~~~~~g~  404 (461)
                      ++|+++|+.+...++|+
T Consensus       350 ~~g~~~g~~~~~~~~g~  366 (366)
T TIGR00886       350 ATGAVSGLVGAIGNLGG  366 (366)
T ss_pred             hcccHHHHHHHhccCCC
Confidence            89999999998887763

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.97  E-value=1.6e-28  Score=247.69  Aligned_cols=357  Identities=14%  Similarity=0.147  Sum_probs=259.1

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-----Cccee-eehhhHHHHHHHHHhhcc---cchhhH
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-----GCRNV-TICGAILGSACLAVSVFA---KNVITL   79 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----G~r~~-~~~g~~~~~~~~~l~~~~---~~~~~l   79 (461)
                      ...|.+.++.|.+.+++|.. +.....+ +..++.|++.||+     |||+. +..+.++.+++.+.+++.   ++++.+
T Consensus        33 ~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l  110 (491)
T PRK11010         33 GTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWL  110 (491)
T ss_pred             HHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHH
Confidence            34788888899999999986 4444444 5899999999999     99885 667777777887777665   467777


Q ss_pred             HHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH-hhchhHHHHHHHHHHHHHHH
Q psy15069         80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR-EYGWKITLLVLSVTVLSAVL  157 (461)
Q Consensus        80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-~~gw~~~f~i~~~~~l~~~i  157 (461)
                      .+. +++.|++.+...++..++..+++| |+|++++++...+..+|.++++.+...+.+ ..|||.+|++.++++++..+
T Consensus       111 ~~~-~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l  189 (491)
T PRK11010        111 AAL-AVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCII  189 (491)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence            764 788899888888888899999995 889999999999999999999999999998 46999999999988777655


Q ss_pred             HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069        158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (461)
                      ..++ .|+++.++  +++                                                           ++.
T Consensus       190 ~~~~-~~e~~~~~--~~~-----------------------------------------------------------~~~  207 (491)
T PRK11010        190 ATLL-APEPTDTI--PVP-----------------------------------------------------------KTL  207 (491)
T ss_pred             HHHh-cCCCcccc--ccc-----------------------------------------------------------cch
Confidence            5444 33321110  000                                                           000


Q ss_pred             cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHH-HHhhhhhh
Q psy15069        238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLIS-IVGAANMV  315 (461)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~-~~~~~~~~  315 (461)
                              .+....+.+     ++++++..|...+..++..........+.++|+ ++.|++..+.+.... ...++.++
T Consensus       208 --------~~~~~~~l~-----~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~ii  274 (491)
T PRK11010        208 --------EQAVVAPLR-----DFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIV  274 (491)
T ss_pred             --------hhhHHHHHH-----HHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence                    000011222     245666676666555655566556667778887 678999999999875 55679999


Q ss_pred             hhhhhhhccCCCCcchhHHHHHHH-HHHHHHHHHhhhh-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHH
Q psy15069        316 SRVILGYISDRPCVNRLYIYNGCL-AICGAATVICAFC-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAF  393 (461)
Q Consensus       316 g~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (461)
                      +.+++|+++||+++++........ .+..+........ ++.+.+....++..++.+...+...++..++.+++..++.+
T Consensus       275 G~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~  354 (491)
T PRK11010        275 GALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQF  354 (491)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence            999999999997655543321111 1111122222232 34444444555655555655666778888999999999999


Q ss_pred             HHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        394 GLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       394 g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      |+.+...++|..+++.+.|++.|..| |+..|.+.+++.+.+.+....+++
T Consensus       355 gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        355 ALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999875 999999999988888777766654

>TIGR00889 2A0110 nucleoside transporter

Probab=99.96  E-value=1.4e-28  Score=243.46  Aligned_cols=352  Identities=13%  Similarity=0.121  Sum_probs=248.1

Q ss_pred             eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCc-ceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGC-RNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~-r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      +.+.+.+.+++|.+..++|++.+++.++..+++++.|++.||+|+ |+++..+.++.+++..+..+.++++.+++. |++
T Consensus        23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l  101 (418)
T TIGR00889        23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPV-LLA  101 (418)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-HHH
Confidence            344556677799999999999999999999999999999999965 778888888888888888898999988874 788


Q ss_pred             ccccccccchhHHHHHHhhh---------hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q psy15069         87 TGLGFGLIYLPAIVSVTCYF---------ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVL  157 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f---------~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i  157 (461)
                      .|++.+...+...++...+.         +..|.+..|      .+|.+++|.+++.+....+|+ +|++.+++.++..+
T Consensus       102 ~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~  174 (418)
T TIGR00889       102 NSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGV  174 (418)
T ss_pred             HHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHH
Confidence            88876665555544332221         112333333      478888888888773333454 46666666655544


Q ss_pred             HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069        158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (461)
                      + .+..|+++.++  +++                                                          ++  
T Consensus       175 ~-~~~~~e~~~~~--~~~----------------------------------------------------------~~--  191 (418)
T TIGR00889       175 F-ALTLPDIPVAK--STA----------------------------------------------------------KM--  191 (418)
T ss_pred             H-HhcCCCCCCCc--ccc----------------------------------------------------------cc--
Confidence            3 33334322111  000                                                          00  


Q ss_pred             cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCc--------hhhHHHHHHH
Q psy15069        238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTR--------SNASSLISIV  309 (461)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~  309 (461)
                               . .++... ....+.+|+|.++.+.+..++..........+.|.++++.|.++        ...+...++.
T Consensus       192 ---------~-~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~  260 (418)
T TIGR00889       192 ---------S-IKVMLG-LDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLS  260 (418)
T ss_pred             ---------C-HHHHhh-hhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHH
Confidence                     0 000000 00113578888888777777766655556678888888877554        5668999999


Q ss_pred             hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC
Q psy15069        310 GAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLG  385 (461)
Q Consensus       310 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~  385 (461)
                      .+..+++.++.|++.||+++|+.  +..+.++.++...+.....    +.+.+++..++.|++.+...+....++.|.+|
T Consensus       261 ~i~~i~~~~~~g~l~dr~g~r~~--l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p  338 (418)
T TIGR00889       261 QFSEIFFILTIPFFLKRFGIKKV--MLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVP  338 (418)
T ss_pred             HHHHHHHHHHHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999999999999654443  3445555555544443322    23455667788999888888888889999999


Q ss_pred             ccchhHHHHHHH-HHHHhhhhhccceeeeeecccC-----CchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        386 LDRLTNAFGLLL-LFQGIASLVGPPIAGFLYDSTL-----SYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       386 ~~~~~~~~g~~~-~~~~~g~~~gp~i~g~l~~~~g-----~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      +++|++++|+.+ ....+|.++||.++|+++|+.|     +|+..|.+.+++.++++++.++.-
T Consensus       339 ~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~  402 (418)
T TIGR00889       339 VHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF  402 (418)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999997 5678999999999999999865     389999988888777766655444

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>KOG1330|consensus

Probab=99.96  E-value=1.7e-29  Score=237.48  Aligned_cols=345  Identities=15%  Similarity=0.151  Sum_probs=252.3

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccc
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGL   89 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~   89 (461)
                      ..++.++.+|++++..|++.+.+.+.+++++|+.|.+.|||+||+++..|..++.++.+++++++.+|++.++ |-+.|+
T Consensus        55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~-R~~vGi  133 (493)
T KOG1330|consen   55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLC-RGFVGI  133 (493)
T ss_pred             hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcc
Confidence            5788999999999999999999999999999999999999999999999999999999999999999999985 999999


Q ss_pred             cccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15069         90 GFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG-WKITLLVLSVTVLSAVLFGILLRPLEE  167 (461)
Q Consensus        90 g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g-w~~~f~i~~~~~l~~~i~~~~~~~~~~  167 (461)
                      |.+...+.+.+++++.|| ++|++++++++....+|..+|.+.+..+.+.-+ |||.|+..+++++++.++..++.++|+
T Consensus       134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~  213 (493)
T KOG1330|consen  134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE  213 (493)
T ss_pred             chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence            999999999999999996 789999999999999999999888888777555 999999999999999998888877765


Q ss_pred             CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCc
Q psy15069        168 QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSD  247 (461)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (461)
                      +.+.++.+.+.                                                        +.      .++..
T Consensus       214 rga~~~~~~~~--------------------------------------------------------~~------~~~~t  231 (493)
T KOG1330|consen  214 RGARDEVDGEN--------------------------------------------------------KM------VKPFT  231 (493)
T ss_pred             cccccccccCC--------------------------------------------------------cC------CCCcc
Confidence            43311110000                                                        00      00001


Q ss_pred             hhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH----HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        248 DTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA----EQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                      ...+..+     .+.|++.+..-.+.+....+....+..|.|.+.    +-.|.+..+..++..+...++.+|.+++|.+
T Consensus       232 s~~kDl~-----~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggii  306 (493)
T KOG1330|consen  232 SVWKDLK-----VLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGII  306 (493)
T ss_pred             chHHHHH-----HHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHH
Confidence            1112222     235566666666666666666666667777654    3446677777778888999999999999999


Q ss_pred             cCCCCc-----chhH---H-HHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhcCccchhHH
Q psy15069        324 SDRPCV-----NRLY---I-YNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIG-AYVGLTSVILVDLLGLDRLTNA  392 (461)
Q Consensus       324 ~dr~~~-----~~~~---~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  392 (461)
                      +||+.+     .+..   + -..+...+...+++++. ..+.....+.++++|.... ...+...-+..+.+|+++|.++
T Consensus       307 sd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a  386 (493)
T KOG1330|consen  307 SDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTA  386 (493)
T ss_pred             HHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHH
Confidence            998421     1111   1 11122222222222222 2223333344455555433 2333444567889999999999


Q ss_pred             HHHHHHHHH-hhhhhccceeeeeecccCCch
Q psy15069        393 FGLLLLFQG-IASLVGPPIAGFLYDSTLSYS  422 (461)
Q Consensus       393 ~g~~~~~~~-~g~~~gp~i~g~l~~~~g~~~  422 (461)
                      +++-..+.- .|.+-+|.+.|.+.|+.-+|+
T Consensus       387 ~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~  417 (493)
T KOG1330|consen  387 YALDTVFEHIFGDAASPYIVGILSDKLRGYK  417 (493)
T ss_pred             HHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence            999877755 455556669999999876566

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.96  E-value=2.4e-27  Score=234.24  Aligned_cols=351  Identities=14%  Similarity=0.158  Sum_probs=241.5

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-----Ccce-eeehhhHHHHHHHHHhhcc---cchhhH
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-----GCRN-VTICGAILGSACLAVSVFA---KNVITL   79 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----G~r~-~~~~g~~~~~~~~~l~~~~---~~~~~l   79 (461)
                      -.+|.+.++.|.|.+++|++..+...  .+.+++.|+++||+     |||| ++..+.++.+++..+.++.   ++++.+
T Consensus        20 ~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l   97 (402)
T PRK11902         20 GTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPL   97 (402)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHH
Confidence            34788899999999999999777665  58899999999999     8875 7888888888888777776   356766


Q ss_pred             HHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh-hchhHHHHHHHHHHHHHHH
Q psy15069         80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE-YGWKITLLVLSVTVLSAVL  157 (461)
Q Consensus        80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~-~gw~~~f~i~~~~~l~~~i  157 (461)
                      ++. .++.++..+...++..+++.+++| |+|++++++...+.++|.++++.++..+.+. +|||..|++.+++.++..+
T Consensus        98 ~~~-~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l  176 (402)
T PRK11902         98 AGL-AVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL  176 (402)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence            654 567788788888888899999996 6699999999999999999999999999886 4999999999988766544


Q ss_pred             HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069        158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (461)
                      .. +..|+++.+++  ++                                                           ++.
T Consensus       177 ~~-~~~~e~~~~~~--~~-----------------------------------------------------------~~~  194 (402)
T PRK11902        177 TT-LWAPEPEVPAR--PP-----------------------------------------------------------RSL  194 (402)
T ss_pred             HH-HhcCCCccccc--cc-----------------------------------------------------------chh
Confidence            33 33343321110  00                                                           000


Q ss_pred             cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHh-hhhhh
Q psy15069        238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVG-AANMV  315 (461)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~-~~~~~  315 (461)
                              .++.+...+     +++|+|.++.+++..++..........+.+.++ ++.|+++.+.+++....+ ++.++
T Consensus       195 --------~~~~~~~~~-----~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~  261 (402)
T PRK11902        195 --------GEAVVGPLR-----DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIV  261 (402)
T ss_pred             --------HHHHHHHHH-----HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHH
Confidence                    000111222     367888888776666655544333333444444 778999999999887655 46889


Q ss_pred             hhhhhhhccCCCCcchhHHHHHHH-HHHHHHHHHhhhh-hhHHHHHHHHHH----HhhhhhhHHHHHHHHHHHhcCccch
Q psy15069        316 SRVILGYISDRPCVNRLYIYNGCL-AICGAATVICAFC-YNYVELAIYAGV----FGAMIGAYVGLTSVILVDLLGLDRL  389 (461)
Q Consensus       316 g~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l----~g~~~~~~~~~~~~~~~~~~~~~~~  389 (461)
                      +.+++|++.||+++++........ .+..+.+....+. ++.+.++...++    .|++.+...+....++.+.+|.+  
T Consensus       262 g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--  339 (402)
T PRK11902        262 GALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT--  339 (402)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH--
Confidence            999999999997655543322111 1111222222333 344555544433    44445555666666666666644  


Q ss_pred             hHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        390 TNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       390 ~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                        ..++.+...+++..+++.++|.++|..| |+..|.+.+++.+++.+.....
T Consensus       340 --~~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~~~~  389 (402)
T PRK11902        340 --QYALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALLWLM  389 (402)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHH
Confidence              4566666667777777778999999986 9999999888887776655433

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.96  E-value=5.4e-28  Score=268.75  Aligned_cols=341  Identities=12%  Similarity=0.037  Sum_probs=251.1

Q ss_pred             ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeeh---hhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHH
Q psy15069         23 GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTIC---GAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAI   99 (461)
Q Consensus        23 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~---g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~   99 (461)
                      ...+++.+++.+.+.+++|++|.++||+|||+++..   +.+...+..++....++++++++. |+++|++.+...++..
T Consensus        52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~-~~l~gi~~a~~~p~~~  130 (1140)
T PRK06814         52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAA-LFLMGIHSALFGPIKY  130 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHhhchHHH
Confidence            347888999999999999999999999999997533   223333333333344889999885 9999999999999999


Q ss_pred             HHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCC
Q psy15069        100 VSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGA  178 (461)
Q Consensus       100 ~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~  178 (461)
                      +++.+++ +++|++++|+.+++.++|.+++|++++++.+..||++.|++.+++.+...++.+++ ++++.++ +..+.  
T Consensus       131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~--  206 (1140)
T PRK06814        131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFI-PKTGNAA-PDLKI--  206 (1140)
T ss_pred             HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC-CCCCCCC-CCCee--
Confidence            9999998 47899999999999999999999999999999999999855444444444433333 3221111 00000  


Q ss_pred             CCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhc
Q psy15069        179 LPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLD  258 (461)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (461)
                                                                            ..+.         ..+....++    
T Consensus       207 ------------------------------------------------------~~~~---------~~~~~~~~~----  219 (1140)
T PRK06814        207 ------------------------------------------------------DRNI---------IRSTITLLK----  219 (1140)
T ss_pred             ------------------------------------------------------ccch---------HHHHHHHHH----
Confidence                                                                  0000         000111122    


Q ss_pred             cccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHH
Q psy15069        259 MELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNG  337 (461)
Q Consensus       259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~  337 (461)
                       .+.++|.+|...+..++.++....+..++|.|+ +.+|.+..+.+++.+..+++.++|+++.|+++||...++....  
T Consensus       220 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~--  296 (1140)
T PRK06814        220 -YAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPI--  296 (1140)
T ss_pred             -HHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehH--
Confidence             356888898888888888877778888999999 5579999999999999999999999999999987543433222  


Q ss_pred             HHHHHHHHHHHhhhh--------------------hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069        338 CLAICGAATVICAFC--------------------YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL  397 (461)
Q Consensus       338 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  397 (461)
                      +.++.++..+.+.+.                    .+.|.+++..+++|++.+...+...+++.+.+|++.+|+++|+.+
T Consensus       297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~  376 (1140)
T PRK06814        297 GALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANN  376 (1140)
T ss_pred             HHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHH
Confidence            222222222212221                    566777778888999999888889999999999999999999999


Q ss_pred             HHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069        398 LFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM  438 (461)
Q Consensus       398 ~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~  438 (461)
                      ++..++..+|+.+.|.+.+...++...+++.+++.++....
T Consensus       377 ~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  417 (1140)
T PRK06814        377 VLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVAIL  417 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999876556777776666554444433

>KOG2533|consensus

Probab=99.96  E-value=2.3e-28  Score=241.15  Aligned_cols=360  Identities=12%  Similarity=0.054  Sum_probs=254.3

Q ss_pred             HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccc
Q psy15069         14 FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGL   93 (461)
Q Consensus        14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~   93 (461)
                      +.+|.+....+.+.+.+++.++|.++++++|.|.||++..+.+....+++++-.++.+.++|++.++++ |++.|+..++
T Consensus        72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ial-r~llGl~es~  150 (495)
T KOG2533|consen   72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIAL-RFLLGLFESG  150 (495)
T ss_pred             CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHhcc
Confidence            458899999999999999999999999999999999999999999999999999888889999999985 9999999999


Q ss_pred             cchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH------hhchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15069         94 IYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR------EYGWKITLLVLSVTVLSAVLFGILLRPLE  166 (461)
Q Consensus        94 ~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~------~~gw~~~f~i~~~~~l~~~i~~~~~~~~~  166 (461)
                      .+|+...++..|| +++|++.+|++.+..++|.++++.++..+.+      .+||||.|++.|+++++..+..+++.|+.
T Consensus       151 ~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~  230 (495)
T KOG2533|consen  151 GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN  230 (495)
T ss_pred             cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence            9999999999999 6899999999999999999999999999743      57999999999999999998888888876


Q ss_pred             CCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCC
Q psy15069        167 EQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLS  246 (461)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (461)
                      |...+-..+   .|+          +.  ..+.                  +  ++      .+. ++++         +
T Consensus       231 P~~~~fl~~---~ek----------~~--~~~~------------------~--~~------~~~-~~~~---------~  259 (495)
T KOG2533|consen  231 PSKAWFLTD---EEK----------EL--VVER------------------L--RE------SPS-GGIE---------N  259 (495)
T ss_pred             hhhccccch---HHH----------HH--HHHH------------------H--Hh------ccC-CCcc---------c
Confidence            543310000   000          00  0000                  0  00      000 0000         0


Q ss_pred             chhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069        247 DDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVILGYISD  325 (461)
Q Consensus       247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d  325 (461)
                      +..+..+     ++.+++|..|.+.+..++.....+++..|+|.++++ .|++..++..+.+...++++++.+++|+++|
T Consensus       260 ~~~~~~~-----~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsd  334 (495)
T KOG2533|consen  260 KFKWKGF-----KEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSD  334 (495)
T ss_pred             ccCHHHH-----HHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHH
Confidence            0111222     246899999999999999999999999999999977 5699999999999999999999999999999


Q ss_pred             CCC--cchhHHHHHHHHH-HHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc-cchhHHHHHHHHHHH
Q psy15069        326 RPC--VNRLYIYNGCLAI-CGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGL-DRLTNAFGLLLLFQG  401 (461)
Q Consensus       326 r~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~  401 (461)
                      |..  ..++......+.+ ..++...+...+..............+.....+.......+.... .++-+..+......+
T Consensus       335 r~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~  414 (495)
T KOG2533|consen  335 RLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTG  414 (495)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchh
Confidence            953  3333333333322 223323333333333333333333334444455555555555443 344444555555555


Q ss_pred             hhhhhcc-ceeeeeecccCCchHHHHHHhHH
Q psy15069        402 IASLVGP-PIAGFLYDSTLSYSPAFFLAGGA  431 (461)
Q Consensus       402 ~g~~~gp-~i~g~l~~~~g~~~~~f~~~~~~  431 (461)
                      .++.++| ...+....+. .|...|......
T Consensus       415 s~~~~~~~~~~~~~ap~y-~~~~~f~~~~~~  444 (495)
T KOG2533|consen  415 SAGAISGQLFRSLDAPRY-GWGAVFYMLVAA  444 (495)
T ss_pred             HHHHhhhhhcccccCcch-hhhhHHHHHHHH
Confidence            5555544 3344444433 366677443333

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.96  E-value=1.6e-27  Score=235.06  Aligned_cols=354  Identities=13%  Similarity=0.085  Sum_probs=247.9

Q ss_pred             ehHHH-HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hccc-----chhhHH
Q psy15069         10 LFIEF-TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFAK-----NVITLC   80 (461)
Q Consensus        10 ~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~~-----~~~~l~   80 (461)
                      ++|.+ .+++|.+..+.|++.+++.+.+.+++++.|++.||+|||+.++.+.+..+++....   .+.+     .++.++
T Consensus        24 ~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (396)
T TIGR00882        24 FFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI  103 (396)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            34444 55689999999999999999999999999999999999999988776665544321   2221     122233


Q ss_pred             HHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI  160 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~  160 (461)
                      + .|++.|++.+...+....+..+. .++++...|......++|.+++|++++.+.+ +|||.+|++.+++.++..++.+
T Consensus       104 ~-~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~  180 (396)
T TIGR00882       104 V-GGLYLGFVFSAGAGAIEAYIEKV-SRNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLM  180 (396)
T ss_pred             H-HHHHHHHHhccchhhHHHHHHHh-hhhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHH
Confidence            3 36777877776666655444332 2445667788888889999999999887765 6999999999888887665554


Q ss_pred             hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069        161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (461)
                      ...+++  +++++.+++                                                      .+++++   
T Consensus       181 ~~~~~~--~~~~~~~~~------------------------------------------------------~~~~~~---  201 (396)
T TIGR00882       181 FAKPKA--PSSATVANA------------------------------------------------------LGANAS---  201 (396)
T ss_pred             HhCCCC--chhhhhhcc------------------------------------------------------cccccC---
Confidence            444332  111000000                                                      000000   


Q ss_pred             ccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh----CCCchhhHHHHHHHhhhhhhh
Q psy15069        241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR----GVTRSNASSLISIVGAANMVS  316 (461)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~s~~~~~~~~~~~~~~~~~g  316 (461)
                           +.+. ++..     +.+|||.++.+.+..++....+.....+.+.|+++.    +.+....+...+...+...++
T Consensus       202 -----~~~~-~~~~-----~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~  270 (396)
T TIGR00882       202 -----AFSL-KLAL-----ELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALI  270 (396)
T ss_pred             -----CCCH-HHHH-----HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence                 0000 1122     467888887766666555555555556777777443    456667888899999999999


Q ss_pred             hhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH-
Q psy15069        317 RVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL-  395 (461)
Q Consensus       317 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-  395 (461)
                      .+..|++.||+++|+..+  ++..+.++...+....++.+.+++..++.|++..........+..+..+++.+++..+. 
T Consensus       271 ~~~~g~l~~r~g~~~~l~--~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~  348 (396)
T TIGR00882       271 MFCAPLIINRIGAKNALL--IAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIG  348 (396)
T ss_pred             HHHHHHHHHHhccchhHH--HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHH
Confidence            999999999977665443  44555555555555667788777788888888766666666677788888888887766 


Q ss_pred             HHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHH
Q psy15069        396 LLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       396 ~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~  439 (461)
                      .+....+|++++|.+.|++.|..| |+..|.+.+++.++..+..
T Consensus       349 ~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~~  391 (396)
T TIGR00882       349 FQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLIS  391 (396)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999875 9999999888877766554

>TIGR00901 2A0125 AmpG-related permease

Probab=99.95  E-value=1.1e-26  Score=225.70  Aligned_cols=316  Identities=11%  Similarity=0.063  Sum_probs=234.5

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-----Cccee-eehhhHHHHHHHHHhhcc---cchh
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-----GCRNV-TICGAILGSACLAVSVFA---KNVI   77 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----G~r~~-~~~g~~~~~~~~~l~~~~---~~~~   77 (461)
                      ++...|.+.+|+|+|.+++|+..+. .....+ +++.|++.||+     ||||. ++.+.++.+++....++.   .+++
T Consensus         7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~   84 (356)
T TIGR00901         7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP   84 (356)
T ss_pred             HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence            4567899999999999999999655 445554 99999999998     89886 567788888887777777   3555


Q ss_pred             hHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhc--------hhHHHHHH
Q psy15069         78 TLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG--------WKITLLVL  148 (461)
Q Consensus        78 ~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g--------w~~~f~i~  148 (461)
                      .+.+. +++.+.+.+...++..+++.+++ +|+|++++++...+.++|.+++++++..+.+..|        ||.+|++.
T Consensus        85 ~l~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~  163 (356)
T TIGR00901        85 LLAGL-AFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWT  163 (356)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHH
Confidence            55553 56777878888888888999999 5899999999999999999999999999998888        99999988


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccC
Q psy15069        149 SVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKA  228 (461)
Q Consensus       149 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (461)
                      ++..++..+..++..++++.+++  .+                                                     
T Consensus       164 ai~~l~~~~~~~~~~~e~~~~~~--~~-----------------------------------------------------  188 (356)
T TIGR00901       164 ALLILPGLLVTLFLAKEPQEDAS--VP-----------------------------------------------------  188 (356)
T ss_pred             HHHHHHHHHHHHHhccCCCcccc--cc-----------------------------------------------------
Confidence            88777655544444443211100  00                                                     


Q ss_pred             CCCCCCCcccccccccCCchhhhhHhhhhccccccchh---HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHH
Q psy15069        229 TVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPI---FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSL  305 (461)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~  305 (461)
                           +++         .++.+...+     .++++|.   ++.+.+..++.....+....+.|.|+++.|+++.+.+.+
T Consensus       189 -----~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~  249 (356)
T TIGR00901       189 -----KPL---------TQAVLKPIR-----EFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALV  249 (356)
T ss_pred             -----hhH---------HHHHHHHHH-----HHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence                 000         000111222     2455554   666777777777778888899999997799999999988


Q ss_pred             HHHHh-hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHHHhhhhhhHH
Q psy15069        306 ISIVG-AANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC-----------YNYVELAIYAGVFGAMIGAYV  373 (461)
Q Consensus       306 ~~~~~-~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~g~~~~~~~  373 (461)
                      ....+ ++.+++.+++|++.||+++++..+  .++++.++...+..+.           ++.+.+....++.+++.+...
T Consensus       250 ~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  327 (356)
T TIGR00901       250 AKINGLLGAILGGLIGGIIMQPLNILYALL--LFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGT  327 (356)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhHHHHHH--HHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHH
Confidence            88766 578899999999999976555543  3333334333332222           344556666778899999999


Q ss_pred             HHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069        374 GLTSVILVDLLGLDRLTNAFGLLLLFQG  401 (461)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~  401 (461)
                      +...+++.|.+|++++|+.+|+.+...+
T Consensus       328 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       328 VAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            9999999999999999999999887754

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.95  E-value=1.8e-26  Score=257.30  Aligned_cols=355  Identities=11%  Similarity=0.047  Sum_probs=255.1

Q ss_pred             ehHHHHhHhcCCCc--cHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHH---hhcccchhhHHHHhh
Q psy15069         10 LFIEFTKVFQEGDG--VTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAV---SVFAKNVITLCITIG   84 (461)
Q Consensus        10 ~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l---~~~~~~~~~l~i~~~   84 (461)
                      +.+.+..+++.+..  ..+++.+++.+++.++++++|.++||+|||++++.+.++..++.++   +.+.++++.+++ .|
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r  110 (1146)
T PRK08633         32 IQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFA-VT  110 (1146)
T ss_pred             HHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH-HH
Confidence            34555666776544  4799999999999999999999999999999999888766555544   344578888887 48


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh--------h-chhHHHHHHHHHHHH
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--------Y-GWKITLLVLSVTVLS  154 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--------~-gw~~~f~i~~~~~l~  154 (461)
                      +++|++.+...++..+++.+++| ++|++++|+...+.++|.++++++++.+.+.        + +|++.+.+..+...+
T Consensus       111 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (1146)
T PRK08633        111 FLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAV  190 (1146)
T ss_pred             HHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHH
Confidence            99999999999999999999995 8899999999999999999999999999876        2 344444444433333


Q ss_pred             HHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCC
Q psy15069        155 AVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESE  234 (461)
Q Consensus       155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (461)
                      ..++..+..|+.+.+.  ....+                                                       +.
T Consensus       191 ~~~~~~~~~~~~~~~~--~~~~~-------------------------------------------------------~~  213 (1146)
T PRK08633        191 LGLIFAYRLPKVPAAA--PEVFD-------------------------------------------------------KK  213 (1146)
T ss_pred             HHHHHHhcCcCCCCCC--ccccc-------------------------------------------------------cc
Confidence            3333233333221111  00000                                                       00


Q ss_pred             CcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCch-hhHHHHHHHhhh
Q psy15069        235 STEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRS-NASSLISIVGAA  312 (461)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~-~~~~~~~~~~~~  312 (461)
                      +..       .....+....     .++++|.++...+..++..........++|.|+ +.+|++.. +.+++.+...++
T Consensus       214 ~~~-------~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig  281 (1146)
T PRK08633        214 KYL-------FPKLLWRNLK-----LLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIG  281 (1146)
T ss_pred             ccc-------cHHHHHHHHH-----HHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence            000       0001111222     356788888777777766666667778888888 67899998 999999999999


Q ss_pred             hhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069        313 NMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA  392 (461)
Q Consensus       313 ~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (461)
                      .+++.++.|++.||++.++...  ++.++.+++++++.+..+.+.+++..+++|++.+...+...+++.+.+|++.||++
T Consensus       282 ~~~g~~~~g~l~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~  359 (1146)
T PRK08633        282 IGIGSLLAGRLSGRHIELGLVP--LGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKV  359 (1146)
T ss_pred             HHHHHHHHHHHhCCceEccchh--HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhh
Confidence            9999999999999965544333  34444555555555666777777888899999998888888999999999999999


Q ss_pred             HHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069        393 FGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG  436 (461)
Q Consensus       393 ~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~  436 (461)
                      +|+.+++..+|.++++.+++.+.....++...+++.+.+.++..
T Consensus       360 ~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  403 (1146)
T PRK08633        360 LAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGT  403 (1146)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence            99999999999988887776655422235555655555444433

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.95  E-value=2.4e-26  Score=230.30  Aligned_cols=356  Identities=13%  Similarity=0.106  Sum_probs=275.7

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc-----cchhhHHHHh
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA-----KNVITLCITI   83 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~-----~~~~~l~i~~   83 (461)
                      +..+-++.+..-|+..++++..+..+...+.++++|.++||++||++++.+-++..+..++.++.     .+.|.+++. 
T Consensus        31 va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~-  109 (524)
T PF05977_consen   31 VALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLIL-  109 (524)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH-
Confidence            34566777788889999999999999999999999999999999999999988776655443322     367777764 


Q ss_pred             hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILL  162 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~  162 (461)
                      .++.|++.+...|+..+++.+..| ++...++++.....++.-++||.+++.++..+|-.++|.+.++..++.+++...+
T Consensus       110 ~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~  189 (524)
T PF05977_consen  110 TFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW  189 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            689999999999999999999996 6789999999999999999999999999999999999998887766655544444


Q ss_pred             ccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069        163 RPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC  242 (461)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (461)
                      +++.+ +++ ..+                                                           |.-     
T Consensus       190 ~~~~~-~~~-~~~-----------------------------------------------------------e~~-----  203 (524)
T PF05977_consen  190 KPPPP-PSS-LPR-----------------------------------------------------------ERF-----  203 (524)
T ss_pred             ccccc-ccc-cch-----------------------------------------------------------hhh-----
Confidence            33221 110 000                                                           000     


Q ss_pred             ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069        243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILG  321 (461)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g  321 (461)
                         .++.+...+-     +.++|.+....+..++.++....+...+|.+. +.+|.++...|++.+..+++.++|.++.+
T Consensus       204 ---~~~l~~G~ry-----v~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~  275 (524)
T PF05977_consen  204 ---FSALREGLRY-----VRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLP  275 (524)
T ss_pred             ---hhhHHHHHHH-----HhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence               0111122211     23345544444444444555555666788888 67899999999999999999999999999


Q ss_pred             hccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069        322 YISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG  401 (461)
Q Consensus       322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  401 (461)
                      ++.+|++.++.  +..+.+..+++++.+.+.++.+...+..++.|++.........+.+++..|++.+|++++++.+...
T Consensus       276 ~l~~~~~~~~l--v~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~  353 (524)
T PF05977_consen  276 RLRRRLSSRRL--VLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF  353 (524)
T ss_pred             HhhcccCcchh--hHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH
Confidence            99998654433  3456667777778888888998888889999999998888888999999999999999999999999


Q ss_pred             hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      .+..+|..+.|.+.|..| ....+.+.++..+++.++.+..
T Consensus       354 g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~~~~  393 (524)
T PF05977_consen  354 GGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIALRF  393 (524)
T ss_pred             HHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999985 7777777777666666555443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.95  E-value=9.1e-27  Score=232.78  Aligned_cols=332  Identities=16%  Similarity=0.199  Sum_probs=239.7

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh----cCc-ceeeehhhHHHHHHHHHhhcccch------hh
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK----YGC-RNVTICGAILGSACLAVSVFAKNV------IT   78 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~G~-r~~~~~g~~~~~~~~~l~~~~~~~------~~   78 (461)
                      +.+.+.+++|++..++|++.++..+...+..|+.|.+.||    +|| |+.++.+.+..+++.+++.+.++.      +.
T Consensus        22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~  101 (437)
T TIGR00792        22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY  101 (437)
T ss_pred             HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence            4566677899999999999999999999999999999998    576 446778888888888887776643      23


Q ss_pred             HHHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHH-------hhchhHHHHHHH
Q psy15069         79 LCITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-------EYGWKITLLVLS  149 (461)
Q Consensus        79 l~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-------~~gw~~~f~i~~  149 (461)
                      +++ .+++.+++.++..++..++..+..  +++|+++.++.+.+..+|..+++.+...+..       ..|||+.+.+.+
T Consensus       102 ~~~-~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~  180 (437)
T TIGR00792       102 AYI-TYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA  180 (437)
T ss_pred             HHH-HHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence            333 357778887777777667666665  4889999999998888888777766665553       458999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCC
Q psy15069        150 VTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKAT  229 (461)
Q Consensus       150 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (461)
                      +++++..+...+..++++.+.+ ++                                                       
T Consensus       181 ~l~~~~~~~~~~~~~e~~~~~~-~~-------------------------------------------------------  204 (437)
T TIGR00792       181 LIGVVSLIICFFGTKERYSEIP-KN-------------------------------------------------------  204 (437)
T ss_pred             HHHHHHHHHHHcCCEecCCCCC-cc-------------------------------------------------------
Confidence            9888776655544433211000 00                                                       


Q ss_pred             CCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHH
Q psy15069        230 VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISI  308 (461)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~  308 (461)
                           +++        +.+.++..+     .+++||.++.+.+..++...+.+....+.+.|.+. .+ +....+.+.++
T Consensus       205 -----~~~--------~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  265 (437)
T TIGR00792       205 -----IEK--------KLSLKQIFK-----ALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSI  265 (437)
T ss_pred             -----ccc--------CCCHHHHHH-----HHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHH
Confidence                 000        001112222     35789998888887777777766655555555533 34 55667777788


Q ss_pred             HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC--
Q psy15069        309 VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG--  385 (461)
Q Consensus       309 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--  385 (461)
                      ..++.+++.++.+++.||+++++...  .+..+..+..+...+. ++.+..++..++.|++.+...+..+++++|..+  
T Consensus       266 ~~i~~ii~~~~~~~l~~r~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  343 (437)
T TIGR00792       266 AIVAGLIGVLLFPRLVKKFGRKILFA--GGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYG  343 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            88999999999999999977555443  3444444444443333 355566667788899998888888888888764  


Q ss_pred             -----ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        386 -----LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       386 -----~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                           ++++|.+.|+.+++..+|..+++.+.|.+.|..|
T Consensus       344 ~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G  382 (437)
T TIGR00792       344 EWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG  382 (437)
T ss_pred             hhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence                 5668999999999999999999999999998765

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.95  E-value=1.1e-26  Score=215.48  Aligned_cols=333  Identities=17%  Similarity=0.116  Sum_probs=265.8

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhh---cccchhhHHHH
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSV---FAKNVITLCIT   82 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~---~~~~~~~l~i~   82 (461)
                      .-+++.|.+++.++++..+.+++..++..+|.+.++++|++++|+|+|+-++.|+.++++++.+..   -..++..++..
T Consensus        31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~  110 (422)
T COG0738          31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVA  110 (422)
T ss_pred             cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence            446889999999999999999999999999999999999999999999999999999999999873   45677777776


Q ss_pred             hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh-------------------hchh
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE-------------------YGWK  142 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~-------------------~gw~  142 (461)
                      + ++.|.|.+..-+++..++....+ ++..+-+++.+..+++|.+++|++++.++..                   -.||
T Consensus       111 l-Fila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~  189 (422)
T COG0738         111 L-FILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQ  189 (422)
T ss_pred             H-HHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhh
Confidence            4 89999999999999999999884 6778889999999999999999999999872                   2489


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccc
Q psy15069        143 ITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQA  222 (461)
Q Consensus       143 ~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (461)
                      ++|...+...++..+.....+.+..++.+++..                                               
T Consensus       190 ~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~-----------------------------------------------  222 (422)
T COG0738         190 FPYLILAGLLVLLAVLILLSKLPDLQVAAPSLG-----------------------------------------------  222 (422)
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCcCCccccccc-----------------------------------------------
Confidence            999999888777766665554322111110000                                               


Q ss_pred             cccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchh
Q psy15069        223 QIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSN  301 (461)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~  301 (461)
                                   +.         ++  ...     .+++|+|+++...++.|+.-........|++.|+.+ .|.+..+
T Consensus       223 -------------~~---------~~--~~~-----~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~  273 (422)
T COG0738         223 -------------AS---------GS--AGL-----SSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ  273 (422)
T ss_pred             -------------cc---------cc--chH-----HHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH
Confidence                         00         00  011     146899999999999999999999999999999966 8999999


Q ss_pred             hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q psy15069        302 ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILV  381 (461)
Q Consensus       302 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~  381 (461)
                      .+...+.++.+.++||+++.++..|+...|  ++....+...+.++...++++.+.+ ...++.|++.+..+|...++..
T Consensus       274 aa~~~s~~~~~~~vGRFig~~lm~~~~~~k--~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal  350 (422)
T COG0738         274 AAYYLSFFWVGFMVGRFIGSALMSRIKPEK--YLAFYALIAILLLLAVALIGGVVAL-YALFLIGLFNSIMFPTIFSLAL  350 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHH
Confidence            999999999999999999999999954433  3334444444444555566775444 4667889999999999999999


Q ss_pred             HhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC
Q psy15069        382 DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS  420 (461)
Q Consensus       382 ~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~  420 (461)
                      +..| ++ .+..|..-.+..+|+++-|++.|++.|+.|.
T Consensus       351 ~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~  387 (422)
T COG0738         351 KNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGI  387 (422)
T ss_pred             hccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhh
Confidence            9998 44 3444445556678999999999999999873

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.95  E-value=1.3e-25  Score=225.52  Aligned_cols=409  Identities=11%  Similarity=0.019  Sum_probs=265.1

Q ss_pred             eehHHHH-hH--hcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069          9 ILFIEFT-KV--FQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSVFAKNVITLCITIG   84 (461)
Q Consensus         9 ~~~~~~~-~~--~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~   84 (461)
                      .++|.+. ++  +|.+..+.+++.+.+.+.+.+++++.|++.|| +|||+++..+.++.+++.++.+++++++.+++. +
T Consensus        31 ~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~-~  109 (475)
T TIGR00924        31 GILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYG-L  109 (475)
T ss_pred             HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHH-H
Confidence            3455554 44  89999999999999999999999999999999 899999999999999999999999888888775 7


Q ss_pred             ccccccccccchhHHHHHHhhhh-c---cchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-R---LRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI  160 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~---~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~  160 (461)
                      ++.|+|.+...+...+.+.+++| +   +|+.+.++.+.+.++|.+++|++++.+.+.+|||+.|.+.++..+...+..+
T Consensus       110 ~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~  189 (475)
T TIGR00924       110 GTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFF  189 (475)
T ss_pred             HHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence            89999999989999899999985 3   3888999999999999999999999999989999999998866555444333


Q ss_pred             hcccCCC-CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        161 LLRPLEE-QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       161 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                      +.++..+ .+++++..   .+++        .+...........           ..-.. .... ..++....+ ....
T Consensus       190 ~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~-----------~~~~~-~~~~-~~~~~~~~~-~~~~  244 (475)
T TIGR00924       190 AGRHMLRDIGSVPDPL---SGQG--------KTYGKLLLALLAA-----------LALVF-FCAW-LMHHVVIAN-ILLM  244 (475)
T ss_pred             HcccccccCCCCCCCc---chhh--------hhhHHHHHHHHHH-----------HHHHH-HHHH-HHhccHHHH-HHHH
Confidence            3332211 11100000   0000        0000000000000           00000 0000 000000000 0000


Q ss_pred             cccccC-CchhhhhHhh-hhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchh----hHHHHHHHhhh
Q psy15069        240 TTCLNL-SDDTKQTLRE-MLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSN----ASSLISIVGAA  312 (461)
Q Consensus       240 ~~~~~~-~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~----~~~~~~~~~~~  312 (461)
                      ...... ....+...++ ....+..|...+..+++...+....+....+.++.+.+ +.+.+...    .+++.++..+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~  324 (475)
T TIGR00924       245 TVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFW  324 (475)
T ss_pred             HHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHH
Confidence            000000 0000000000 00000112233444555555666666666666777763 33433222    66888888888


Q ss_pred             hhhhhhhhh----hccCC-CCcchhHHHHHHHHHHHHHHHHhhh---------hhhHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069        313 NMVSRVILG----YISDR-PCVNRLYIYNGCLAICGAATVICAF---------CYNYVELAIYAGVFGAMIGAYVGLTSV  378 (461)
Q Consensus       313 ~~~g~~~~g----~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~g~~~~~~~~~~~~  378 (461)
                      .++..++..    ++.|| .+.+...-+.+++++.++++....+         ..+++++++..++.+++.....|...+
T Consensus       325 iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~  404 (475)
T TIGR00924       325 VVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLS  404 (475)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence            888877754    45554 1122222235677777766665543         358889999999999999999999999


Q ss_pred             HHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        379 ILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       379 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      ++.+..|++.||+.+|+......+|..+++.+.....+.. +|...|...++..++..++.+.+.+
T Consensus       405 ~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  469 (475)
T TIGR00924       405 WWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-GVTGVFGKIGLVTLLVGVVMALMVP  469 (475)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999988777764 4777888777777766665554433

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.94  E-value=1.1e-25  Score=216.02  Aligned_cols=387  Identities=12%  Similarity=0.074  Sum_probs=268.5

Q ss_pred             eeeeeehHHHHhHhcCCCcc-HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069          5 YSFGILFIEFTKVFQEGDGV-TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI   83 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~   83 (461)
                      .+.++..|++.+++|+|+.+ .|.+.+++..+|.++++++|.+.||+|.|+++..+.+.+++..++.+++++++.+.+. 
T Consensus        43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~-  121 (511)
T TIGR00806        43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLM-  121 (511)
T ss_pred             chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            35677899999999999999 9999999999999999999999999999999999999999999999999999999985 


Q ss_pred             hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHH--HHHHHHHHHHHh
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVL--SVTVLSAVLFGI  160 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~--~~~~l~~~i~~~  160 (461)
                      |++.|++.|..+ +...++..|+| ++|++++|+..++..+|.++++++++. +..+|||+-+.+.  ...+..+.++..
T Consensus       122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a  199 (511)
T TIGR00806       122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLA  199 (511)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence            999999999998 88899999995 899999999999999999999999999 5578999764332  223333334444


Q ss_pred             hcccCCCCCC-CCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        161 LLRPLEEQPV-EEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       161 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                      +++|.+++.- .++.+..  ++      +...|                      .++.++       ++..+.++..+ 
T Consensus       200 ~~LP~~~~sl~f~~~~~~--~~------~~~~~----------------------~~~~~~-------~~~~~~~~~~~-  241 (511)
T TIGR00806       200 LFLKRPKRSLFFNRLEDV--RG------ALPCE----------------------LDQMVP-------GPGGKLEDYLG-  241 (511)
T ss_pred             HhCCCCchhhhhcccccc--cc------ccccc----------------------cccCCC-------CCccccchhhh-
Confidence            5556432211 0110000  00      00000                      000000       00000000000 


Q ss_pred             cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCC-chhhHHHHHHHhhhhhhhhh
Q psy15069        240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVT-RSNASSLISIVGAANMVSRV  318 (461)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~~g~~  318 (461)
                      ..+...-...+..+     ....+||.+..-.+-..+..++++-+..|....-++..-+ ..--|.+-++..+.+.+..+
T Consensus       242 ~~~~~~~~~l~~~~-----~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~  316 (511)
T TIGR00806       242 TCRDSFLVRMLSEL-----VTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSF  316 (511)
T ss_pred             hhhhHHHHHHHHHH-----HHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHH
Confidence            00000000111111     2346777776667777777778777777777766655332 22455666777778888999


Q ss_pred             hhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069        319 ILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL  398 (461)
Q Consensus       319 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  398 (461)
                      ..|++-.++.+--.+.+.+..++.+..++++..++++|..++..++++..+....++...-+++....+..|...|++++
T Consensus       317 ~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtf  396 (511)
T TIGR00806       317 IAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTF  396 (511)
T ss_pred             HHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHH
Confidence            99998776422224566666666777788888899999999999999999999999999988888888888999999998


Q ss_pred             HHHhhhhhcccee----ee---eecccCCchHHHHHHhHHHHHHHH
Q psy15069        399 FQGIASLVGPPIA----GF---LYDSTLSYSPAFFLAGGAIFVSGV  437 (461)
Q Consensus       399 ~~~~g~~~gp~i~----g~---l~~~~g~~~~~f~~~~~~~l~~~~  437 (461)
                      ..-+-..+-..+.    |.   +.+++--|..-|...+++.++..+
T Consensus       397 vAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~  442 (511)
T TIGR00806       397 VATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG  442 (511)
T ss_pred             HHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence            8776666555443    22   112221355566666666555544

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.94  E-value=4.6e-25  Score=217.12  Aligned_cols=348  Identities=12%  Similarity=0.061  Sum_probs=239.5

Q ss_pred             eehHHHHhHhcCCCccHHHH--HHHHHHhhhhhhHhhHh-hhhhcCcceeeehhhHHH-HHHHHHhh---cccc-hhhHH
Q psy15069          9 ILFIEFTKVFQEGDGVTSWI--ASILVGVTLCSGPISSA-FVNKYGCRNVTICGAILG-SACLAVSV---FAKN-VITLC   80 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~g~-l~dr~G~r~~~~~g~~~~-~~~~~l~~---~~~~-~~~l~   80 (461)
                      .+.|.+.+|.|.|.+++|+.  .+++...-.+.+|+.++ ..||+||||..+.++.+. ++.....+   ...+ ..+++
T Consensus        22 p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (390)
T TIGR02718        22 DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV  101 (390)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence            57899999999999999997  46667777788888855 689999999965555332 21222222   2222 22222


Q ss_pred             HHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFG  159 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~  159 (461)
                      .. -++.++..+...+..-.+..++.+ |+++...+....+..+|.++++.+.+.+.+.+|||.+|++.+++.++..+..
T Consensus       102 ~~-~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~  180 (390)
T TIGR02718       102 GL-LACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV  180 (390)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence            22 234445555555555555566664 5668888888888899999999999999999999999999999887766655


Q ss_pred             hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                      ++..|+++.++  +.                                                            +    
T Consensus       181 ~~~~~~~~~~~--~~------------------------------------------------------------~----  194 (390)
T TIGR02718       181 LWLKDRAVASP--EA------------------------------------------------------------P----  194 (390)
T ss_pred             HHcCCCCcCcc--cc------------------------------------------------------------c----
Confidence            55433221100  00                                                            0    


Q ss_pred             cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhh-hhhhhhh
Q psy15069        240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGA-ANMVSRV  318 (461)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~g~~  318 (461)
                             ++.+.+.     .+.+|+|.++......++..........+.+.|++|.|+++++.+.+....+. ..+++.+
T Consensus       195 -------~~~~~~~-----~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~  262 (390)
T TIGR02718       195 -------LARRASL-----FRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCG  262 (390)
T ss_pred             -------hhhHHHH-----HHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHH
Confidence                   0000111     14678888887777777777777777788899998899999999999888764 6677899


Q ss_pred             hhhhccCCCCcchhHHHHHHHHHHHHH-HHHhhh-----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc-cchhH
Q psy15069        319 ILGYISDRPCVNRLYIYNGCLAICGAA-TVICAF-----CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGL-DRLTN  391 (461)
Q Consensus       319 ~~g~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~  391 (461)
                      +.|++.||+++++....  +..+.++. +.....     .++.+..+....+.+++.+...+.......+..++ +++++
T Consensus       263 ~~g~l~~r~g~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~  340 (390)
T TIGR02718       263 GGAWLVRRAGLWRTFIL--GVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGT  340 (390)
T ss_pred             HHHHHHHHhhHHHHHHH--HHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHH
Confidence            99999999776554433  22222111 111111     12233333444555666777777777777777765 78999


Q ss_pred             HHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069        392 AFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM  438 (461)
Q Consensus       392 ~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~  438 (461)
                      .+++.+...++|..+||.++|.++|..| |+..|...+++.+++.+.
T Consensus       341 ~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~~  386 (390)
T TIGR02718       341 DVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAILL  386 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999875 989998887777666543

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.94  E-value=6.6e-26  Score=233.82  Aligned_cols=281  Identities=17%  Similarity=0.188  Sum_probs=207.7

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc------------
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK------------   74 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~------------   74 (461)
                      .+...+.+.++|+++..+.|++.+.+.+++.++.++.|++.||+|||+++.+|.++.+++.+++++++            
T Consensus        52 ~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~  131 (633)
T TIGR00805        52 VNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTV  131 (633)
T ss_pred             HHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccc
Confidence            34668899999999999999999999999999999999999999999999999999999999987763            


Q ss_pred             ---------------------------------------chhhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhh
Q psy15069         75 ---------------------------------------NVITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLAT  114 (461)
Q Consensus        75 ---------------------------------------~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~  114 (461)
                                                             .+..+++ .|+++|+|.+..++.+.+++++++| ++|++++
T Consensus       132 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~  210 (633)
T TIGR00805       132 SSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLV-SQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI  210 (633)
T ss_pred             cccccccccccccccCCCCCCccccccccccccccCCCceehhhHH-HHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence                                                   1334444 5999999999999999999999995 8899999


Q ss_pred             hhhccchhhhHHHHhHHHHHHHHhh----------------------chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15069        115 GIAVCGSGLGTIIFAPIIDYTVREY----------------------GWKITLLVLSVTVLSAVLFGILLRPLEEQPVEE  172 (461)
Q Consensus       115 gi~~~~~~lg~~i~~~l~~~l~~~~----------------------gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~  172 (461)
                      ++.+++..+|..+++++++.+.+.+                      +|+..|++.+++.++..+..+++ |++ .|+++
T Consensus       211 ~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~-p~~-lp~~~  288 (633)
T TIGR00805       211 GILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF-PKA-LPKEG  288 (633)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC-ccc-cCCcc
Confidence            9999999999999999999988654                      27888999998887766554443 322 11110


Q ss_pred             cccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhh
Q psy15069        173 PVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQT  252 (461)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (461)
                      ++...+.+++                                       +..  .+.   .++...+     .....+. 
T Consensus       289 ~~~~~~~~~~---------------------------------------~~~--~~~---~~~~~~~-----~~~~~~~-  318 (633)
T TIGR00805       289 KRVNVDVHET---------------------------------------EKL--EKS---EDKSRKK-----NSDITKD-  318 (633)
T ss_pred             cccchhhhhh---------------------------------------hcc--ccc---ccccchh-----hhhhHHH-
Confidence            0000000000                                       000  000   0000000     0000001 


Q ss_pred             HhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcc
Q psy15069        253 LREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGA-ANMVSRVILGYISDRPCVN  330 (461)
Q Consensus       253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~  330 (461)
                      .. ...+.+++||.++...+..++.....+.+.+|+|.|+ +++|+++.+++++.....+ +.++|.+++|++.||++.+
T Consensus       319 ~~-~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~  397 (633)
T TIGR00805       319 FP-KIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN  397 (633)
T ss_pred             HH-HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence            00 0123579999999999999999999999999999999 5789999999999888776 5689999999999998755


Q ss_pred             hhHHHHHHHHH
Q psy15069        331 RLYIYNGCLAI  341 (461)
Q Consensus       331 ~~~~~~~~~~~  341 (461)
                      .+.+...++++
T Consensus       398 ~~~~~~~~~~~  408 (633)
T TIGR00805       398 VKKAAYFAICL  408 (633)
T ss_pred             HHHHHHHHHHH
Confidence            54444334333

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.94  E-value=2.1e-24  Score=216.79  Aligned_cols=406  Identities=13%  Similarity=0.048  Sum_probs=251.1

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT   87 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~   87 (461)
                      .+..++++++|.+..+.+++.+.+.....+..+++|++.|| +|||++++.|.+++.++.++++++.+...++...|+++
T Consensus        36 ~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~  115 (489)
T PRK10207         36 ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTI  115 (489)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence            34556678899999999999999998888889999999999 99999999999999999999999877555443348899


Q ss_pred             cccccccchhHHHHHHhhhh-c--cchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         88 GLGFGLIYLPAIVSVTCYFE-R--LRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        88 G~g~~~~~~~~~~~~~~~f~-~--~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      |+|.|...+...+++.+++| +  +|+++.++...+.++|..++|.+++++.+.+|||+.|++.++..+...+...+.++
T Consensus       116 ~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~  195 (489)
T PRK10207        116 AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRG  195 (489)
T ss_pred             HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcch
Confidence            99999999999999999995 3  45789999999999999999999999999999999999865533333333223221


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      ..+... ++.++  .+.      |...   ...-.....           .     - --....... ............
T Consensus       196 ~~~~~~-~~~~~--~~~------d~~~---~~l~~~~~~-----------~-----~-~~~~~~~~~-~~~~~~~~~~~~  245 (489)
T PRK10207        196 MVKDIG-SEPDH--KPM------SFSK---LLLVLLGSV-----------V-----M-IFVCAWLMH-NVEVANLVLIVL  245 (489)
T ss_pred             hhcccC-CCCCc--cch------hhhh---HHHHHHHHH-----------H-----H-HHHHHHHHh-hhhHHHHHHHHH
Confidence            111100 00000  000      0000   000000000           0     0 000000000 000000000000


Q ss_pred             CCchhhh-hHhhhhccccccchhHHHHH--HHHHHHhhccccchhhHhhHHHH-hCCCc----hhhHHHHHHHhhhhhhh
Q psy15069        245 LSDDTKQ-TLREMLDMELLRDPIFILFT--ISNIFTSIGFNVPYVYIVKLAEQ-RGVTR----SNASSLISIVGAANMVS  316 (461)
Q Consensus       245 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~g~s~----~~~~~~~~~~~~~~~~g  316 (461)
                      ....... -.++....+..|+|.+....  +...+....+......++.+.++ .+.+.    -....+.+...+..++.
T Consensus       246 ~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~  325 (489)
T PRK10207        246 SIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVA  325 (489)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHH
Confidence            0000000 00000011345566544322  22333444444454566666642 22211    12344555566777788


Q ss_pred             hhhhhhccCCCCcchh-----HHHHHHHHHHHHHHHHh-----hh-----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q psy15069        317 RVILGYISDRPCVNRL-----YIYNGCLAICGAATVIC-----AF-----CYNYVELAIYAGVFGAMIGAYVGLTSVILV  381 (461)
Q Consensus       317 ~~~~g~l~dr~~~~~~-----~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~  381 (461)
                      +++.+++.||.++|+.     ..+.+++++.+++++..     .+     ..+.++++...++.|++.+...+.....+.
T Consensus       326 ~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~  405 (489)
T PRK10207        326 SPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIA  405 (489)
T ss_pred             HHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            8889999999765542     01223444444443221     11     125677778889999999999999999999


Q ss_pred             HhcCccchhHHHHHHHHHHHhhhhhccceeeeeec------c---cCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        382 DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD------S---TLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       382 ~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~------~---~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      +..|++.++.++|+.++..++|+.+|..+++....      -   .+.|...|...++..++..++++.+.+
T Consensus       406 ~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~  477 (489)
T PRK10207        406 ALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP  477 (489)
T ss_pred             HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999877754421      1   123677888888777766666555433

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.93  E-value=2e-23  Score=210.79  Aligned_cols=399  Identities=15%  Similarity=0.116  Sum_probs=235.7

Q ss_pred             hHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhhccc-chhhHHHHhhcccc
Q psy15069         11 FIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSVFAK-NVITLCITIGFGTG   88 (461)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~~~~-~~~~l~i~~~~l~G   88 (461)
                      .+++++++|.+..+.+++.+.+........+++|++.|| +|||+.+..+.++..++.+++++++ +.+.+++ .++++|
T Consensus        45 ~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~-~~~l~g  123 (500)
T PRK09584         45 AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYM-GMATIA  123 (500)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHH-HHHHHH
Confidence            344568899999999999988877766777899999999 5999999999999999999988875 4445555 478999


Q ss_pred             ccccccchhHHHHHHhhhhc---cchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069         89 LGFGLIYLPAIVSVTCYFER---LRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL  165 (461)
Q Consensus        89 ~g~~~~~~~~~~~~~~~f~~---~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~  165 (461)
                      +|.|...+...+++.+++|+   +|+.++++.+.+.++|..++|++.+++.+.+|||+.|.+.++..++..+..++.++.
T Consensus       124 ig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~  203 (500)
T PRK09584        124 VGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRW  203 (500)
T ss_pred             HhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            99998888888899999953   245688899999999999999999999999999999998876555444333222211


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      .+...++.++ +  +.      |..+   ..... ....          ....  ..... .+    +++..........
T Consensus       204 ~~~~~~~~~~-~--~~------~~~~---~~~~~-~~~~----------~~~~--~~~~~-~~----~~~~~~~~~~~~~  253 (500)
T PRK09584        204 VKQYGSKPDF-E--PI------NYRK---LLLTI-VGVV----------ALIA--IATWL-LH----NQEIARMALGVVA  253 (500)
T ss_pred             hccCCCCCCc-c--cc------chhh---HHHHH-HHHH----------HHHH--HHHHH-Hh----cchHHHHHHHHHH
Confidence            1110000000 0  00      0000   00000 0000          0000  00000 00    0000000000000


Q ss_pred             CchhhhhHhhh-hccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH---hCCCc------hhhHHHHHHHhhhhhh
Q psy15069        246 SDDTKQTLREM-LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ---RGVTR------SNASSLISIVGAANMV  315 (461)
Q Consensus       246 ~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~------~~~~~~~~~~~~~~~~  315 (461)
                      ........... ...+.-|+| .+..++ .++....++.....+|.++..   ...+.      ...++..++..+..++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil  331 (500)
T PRK09584        254 LGIVVIFGKEAFAMKGAARRK-MIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMI  331 (500)
T ss_pred             HHHHHHHHHHHhhcCHHHHHH-HHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHH
Confidence            00000000000 000111222 222221 223333344444445544321   11211      1255566667766666


Q ss_pred             hhhhh----hhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh---------HHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy15069        316 SRVIL----GYISDRPCVNRLYIYNGCLAICGAATVICAFCYN---------YVELAIYAGVFGAMIGAYVGLTSVILVD  382 (461)
Q Consensus       316 g~~~~----g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~g~~~~~~~~~~~~~~~~  382 (461)
                      ..++.    +++.+|.+  ....+.+++++.+++++......+         .++.+...++.|++.....|...+++.+
T Consensus       332 ~~p~~~~~~~~l~~r~~--~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~  409 (500)
T PRK09584        332 GSPILAAIYNKMGDRLP--MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQ  409 (500)
T ss_pred             HHHHHHHHHHHhCcCCC--cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            66665    66666643  333455677777777766655443         5677888899999999999999999999


Q ss_pred             hcCccchhHHHHHHHHHHHhhhhhccceeeeee---------cccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        383 LLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY---------DSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       383 ~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~---------~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      ..|++.||+.+|+......+|..++..+.+...         ...+.+...|...++..++.+++++.+.+
T Consensus       410 ~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~  480 (500)
T PRK09584        410 LVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP  480 (500)
T ss_pred             hCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999888777777666655443111         11224778888888877755555544433

>KOG0569|consensus

Probab=99.92  E-value=5.9e-24  Score=207.21  Aligned_cols=393  Identities=15%  Similarity=0.115  Sum_probs=261.0

Q ss_pred             HHhHhc--CCCcc----HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc---cchhhHHHHhh
Q psy15069         14 FTKVFQ--EGDGV----TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA---KNVITLCITIG   84 (461)
Q Consensus        14 ~~~~~~--~~~~~----~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~---~~~~~l~i~~~   84 (461)
                      +.+.+|  .++.+    .+.+.+++.++.++++++++.++||+|||..+.++.++..++.++..++   +++..+++. |
T Consensus        45 ~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~G-R  123 (485)
T KOG0569|consen   45 LIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILG-R  123 (485)
T ss_pred             HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-H
Confidence            345566  34433    5667778899999999999999999999999998888888887765544   577777775 9


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--HhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--REYGWKITLLVLSVTVLSAVLFGIL  161 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--~~~gw~~~f~i~~~~~l~~~i~~~~  161 (461)
                      ++.|+..+......+.++.|..| +.||....+.+.+..+|.+++..++.--+  +.-.|++.+.+..+.+++..+...+
T Consensus       124 ~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~  203 (485)
T KOG0569|consen  124 LIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPF  203 (485)
T ss_pred             HHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999889889999997 67999999999999999998866655432  2336998888777776665544433


Q ss_pred             cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                      +   ||+|+.--.++           +.++|.+...+-.++.             +..+++.      +...+|.++   
T Consensus       204 ~---PESPk~Ll~~k-----------~~~~~A~~sl~~y~G~-------------~~~~~~~------e~~~~e~~~---  247 (485)
T KOG0569|consen  204 L---PESPKYLLIKK-----------GDEEEARKALKFYRGK-------------EDVEAEI------EEMLREIEE---  247 (485)
T ss_pred             C---CCCcchHHHHc-----------CCHHHHHHHHHHHhCC-------------CcchhHH------HHHHHHHHH---
Confidence            3   44555311100           0000000000000000             0000000      000000000   


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILG  321 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g  321 (461)
                      ++ ..++.+.+..++...+-+|.+....+.+....+..+.+....|...++++.|++..++.++....++.+.+.++++.
T Consensus       248 ~~-~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~  326 (485)
T KOG0569|consen  248 EE-LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSP  326 (485)
T ss_pred             hc-cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00 00112345566666666777766667777777788888999999999999999999999999999999999999999


Q ss_pred             hccCCCCcchhHHHHHHHHHHHHHHHHhh---hhh-hH--HHH---HHHHHHHhhhhh-hHHHHHHHHHHHhcCccchhH
Q psy15069        322 YISDRPCVNRLYIYNGCLAICGAATVICA---FCY-NY--VEL---AIYAGVFGAMIG-AYVGLTSVILVDLLGLDRLTN  391 (461)
Q Consensus       322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~--~~~---~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~  391 (461)
                      ++.||.|||+.++.  +..++.+..+++.   +.. ..  |..   +.+.+++.++.+ +..|+.+-+.+|++|++.|..
T Consensus       327 ~lid~~gRRpLll~--~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~a  404 (485)
T KOG0569|consen  327 FLIDRLGRRPLLLI--SLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSA  404 (485)
T ss_pred             HHHHhcCCcHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHH
Confidence            99999886665543  3333333322222   111 11  222   233444444444 346788889999999999999


Q ss_pred             HHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHH-HHHHHHhhHh
Q psy15069        392 AFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM-LFVIPSLQSY  448 (461)
Q Consensus       392 ~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~-~~~~~~~~~~  448 (461)
                      +.++......+..++-....-.+.+..|.  ..|....+.+++..+. ...+|+++.|
T Consensus       405 a~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~~~~lPETkgr  460 (485)
T KOG0569|consen  405 AQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYLYRYLPETKGR  460 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence            99999999999999888888888888886  4555555555555444 4455665544

>PRK09669 putative symporter YagG; Provisional

Probab=99.91  E-value=2.4e-23  Score=208.28  Aligned_cols=330  Identities=14%  Similarity=0.102  Sum_probs=221.6

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh----cCc-ceeeehhhHHHHHHHHHhhcccc------hhh
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK----YGC-RNVTICGAILGSACLAVSVFAKN------VIT   78 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~G~-r~~~~~g~~~~~~~~~l~~~~~~------~~~   78 (461)
                      +.+.+.+++|++.+++|.++++..+...+..|+.|.+.||    +|| |+.++.+.+..+++.++....++      ++.
T Consensus        32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~  111 (444)
T PRK09669         32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIY  111 (444)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence            3555677799999999999999999999999999999999    666 56677788888888766555543      234


Q ss_pred             HHHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHH-------hhchhHHHHHHH
Q psy15069         79 LCITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-------EYGWKITLLVLS  149 (461)
Q Consensus        79 l~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-------~~gw~~~f~i~~  149 (461)
                      +++. .++.+.+..+..++-.++..++.  +++|.+..++...+..+|..+++.+...+..       ..||+..+.+.+
T Consensus       112 ~~~~-~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~  190 (444)
T PRK09669        112 ACVT-YILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG  190 (444)
T ss_pred             HHHH-HHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence            4443 35556666666666677888877  4889988888887777777776654444332       357898888888


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCC
Q psy15069        150 VTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKAT  229 (461)
Q Consensus       150 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (461)
                      +++++..+..++..++++.+++  +                                                       
T Consensus       191 ii~~v~~~~~~~~~~e~~~~~~--~-------------------------------------------------------  213 (444)
T PRK09669        191 LLGVVLFFCCFFMTKERYTPEV--D-------------------------------------------------------  213 (444)
T ss_pred             HHHHHHHHHHhCCeEEecCCCC--c-------------------------------------------------------
Confidence            8877766554443322211110  0                                                       


Q ss_pred             CCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHH
Q psy15069        230 VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIV  309 (461)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~  309 (461)
                            +         +.+.++..+     ..+|||.++.+++..++............+.|.+..--+++..+.+....
T Consensus       214 ------~---------~~~~~~~~~-----~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~  273 (444)
T PRK09669        214 ------N---------SSSVWKDLK-----LLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTG  273 (444)
T ss_pred             ------C---------CCCHHHHHH-----HHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHH
Confidence                  0         000112222     35789988887777666555554333333333333222334444555566


Q ss_pred             hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH-HHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC--
Q psy15069        310 GAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA-ATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG--  385 (461)
Q Consensus       310 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--  385 (461)
                      .+..+++.++++++.||+++++....  +.+...+ ...+... .++.+.+++..++.|++.+...+..++++.|..+  
T Consensus       274 ~i~~ii~~~~~~~l~~r~gk~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~  351 (444)
T PRK09669        274 MIAGLFGALLSERLLGKFDRVRAFKW--TIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYE  351 (444)
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHH--HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            67888899999999999766555443  2322222 1111112 3456667777788999999999999999998874  


Q ss_pred             -----ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        386 -----LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       386 -----~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                           ++..|..+|..+++..+|..+||.+.|.+.|..|
T Consensus       352 e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G  390 (444)
T PRK09669        352 EKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD  390 (444)
T ss_pred             hhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence                 3445677899999999999999999999998765

>KOG2615|consensus

Probab=99.91  E-value=3.9e-23  Score=189.48  Aligned_cols=339  Identities=15%  Similarity=0.155  Sum_probs=226.1

Q ss_pred             ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHH
Q psy15069         23 GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSV  102 (461)
Q Consensus        23 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~  102 (461)
                      .-.|.+.|.+.+...++++..|.+.||||||+++++|++..++++.+.++++|+..+++ -|++.|+..|-..+ ..+++
T Consensus        68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~-aR~l~Gi~kgnl~v-~rAii  145 (451)
T KOG2615|consen   68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVL-ARFLGGIFKGNLSV-IRAII  145 (451)
T ss_pred             hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhccCchHH-HHHHH
Confidence            45789999999999999999999999999999999999999999999999999955554 49999999997554 44778


Q ss_pred             Hhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH---hhchhHHHHHHHH--HHHHHH-HH-HhhcccCCCCCCCCcc
Q psy15069        103 TCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR---EYGWKITLLVLSV--TVLSAV-LF-GILLRPLEEQPVEEPV  174 (461)
Q Consensus       103 ~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~---~~gw~~~f~i~~~--~~l~~~-i~-~~~~~~~~~~~~~~~~  174 (461)
                      +|.+ +|+|+++++.....+++|.++||.+++++.+   ..|- ++|..-..  +.+... +. ..++.|++ .|. +++
T Consensus       146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~-~p~alP~~~v~i~a~~~v~~~~~~lpET-L~~-rk~  222 (451)
T KOG2615|consen  146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGS-YPFALPCLLVFILAAGDVTFFPWFLPET-LPL-RKR  222 (451)
T ss_pred             HhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhcc-CchHHHHHHHHHHHHHHHHHHHHhCCcc-ccc-hhh
Confidence            8888 7999999999999999999999999999987   2332 22222111  111111 11 11223332 221 111


Q ss_pred             cCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHh
Q psy15069        175 EDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLR  254 (461)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (461)
                      +            |.+.+.++.+++                     +.+                      ..+.+    
T Consensus       223 ~------------~~~~~~~~~~~~---------------------~~~----------------------~~~~~----  243 (451)
T KOG2615|consen  223 N------------DEHSTLQEAADD---------------------RLA----------------------LLKFA----  243 (451)
T ss_pred             c------------ccccchhhhhhh---------------------hhh----------------------hcchh----
Confidence            1            001111111100                     000                      00000    


Q ss_pred             hhhccccccchhH------HH-HHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069        255 EMLDMELLRDPIF------IL-FTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR  326 (461)
Q Consensus       255 ~~~~~~~l~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr  326 (461)
                      .......+||++.      +. +.+-+++....+..+....+.+. +.+|+++.|.|.+++..++...+.+....+..||
T Consensus       244 ~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~  323 (451)
T KOG2615|consen  244 RIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPR  323 (451)
T ss_pred             hhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccc
Confidence            0001112233221      11 22222322332223333333333 6789999999999999999999999999999998


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhh
Q psy15069        327 PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLV  406 (461)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  406 (461)
                      ..-.-+-.....+..+.-.+++.........+++...+..+..+...+....++.+..|.++||+..|+....+.++-++
T Consensus       324 ~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRai  403 (451)
T KOG2615|consen  324 YKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAI  403 (451)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHh
Confidence            43122323333344444444455566677788888889999888888888999999999999999999999999999999


Q ss_pred             ccceeeeeecccCCchHHH
Q psy15069        407 GPPIAGFLYDSTLSYSPAF  425 (461)
Q Consensus       407 gp~i~g~l~~~~g~~~~~f  425 (461)
                      ||.+.|.+..+...-+..+
T Consensus       404 GPlv~g~i~~Ws~~~~~a~  422 (451)
T KOG2615|consen  404 GPLVSGVIFSWSQGAQPAY  422 (451)
T ss_pred             hhhhhheeEEEecCCCcee
Confidence            9999999987653333333

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.90  E-value=1.6e-27  Score=239.27  Aligned_cols=380  Identities=18%  Similarity=0.251  Sum_probs=235.1

Q ss_pred             cHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc---chhhHHHHhhccccccccccchhHHH
Q psy15069         24 VTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK---NVITLCITIGFGTGLGFGLIYLPAIV  100 (461)
Q Consensus        24 ~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~---~~~~l~i~~~~l~G~g~~~~~~~~~~  100 (461)
                      +.+++.+...++..++++++|.+.||+|||+.+..+.++..++.++.++++   |++.+++. |++.|++.|...+....
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-R~~~G~~~g~~~~~~~~  125 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIG-RFLIGFGIGGAYVVSPI  125 (451)
T ss_pred             HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence            578999999999999999999999999999999999999999999999999   99999985 99999999999999999


Q ss_pred             HHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHh---hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccC
Q psy15069        101 SVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE---YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVED  176 (461)
Q Consensus       101 ~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~---~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~  176 (461)
                      ++.|.. +|+|++...+.+.+..+|.+++..+...+.+.   .+||..+.+..+.++...+... +.  ||+|++--.+.
T Consensus       126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~-~~--pESP~wL~~~~  202 (451)
T PF00083_consen  126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRF-FL--PESPRWLLSKG  202 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cc--ccccceecccc
Confidence            999988 58899999999999999988887776655332   3599999888887766544432 33  44555411110


Q ss_pred             CCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhh
Q psy15069        177 GALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREM  256 (461)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (461)
                      +            ++|.++..+.                  ....        +..++|.+++....++.++.+....+.
T Consensus       203 ~------------~~~A~~~l~~------------------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l  244 (451)
T PF00083_consen  203 R------------DEEAEKVLRK------------------LRGK--------EIEDEEIEEIKAEKKESQESKASWRDL  244 (451)
T ss_pred             c------------cccccccccc------------------cccc--------ccccccccccccccccccccceeeeec
Confidence            0            0000000000                  0000        000000000000000000000112211


Q ss_pred             hccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHH
Q psy15069        257 LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYN  336 (461)
Q Consensus       257 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~  336 (461)
                      +..+..+.+.+....+..+....+.+....+.+.+.++.+.+..  -.......+...++.++..++.||+|||+..+  
T Consensus       245 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i--  320 (451)
T PF00083_consen  245 FRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLI--  320 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccc--
Confidence            11111122222223333333334445556667777788887766  22233455667778888889999987665544  


Q ss_pred             HHHHHHHHHHHHhh----h-hhh----HHHHHHHHHHHhhhhh-hHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhh
Q psy15069        337 GCLAICGAATVICA----F-CYN----YVELAIYAGVFGAMIG-AYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLV  406 (461)
Q Consensus       337 ~~~~~~~~~~~~~~----~-~~~----~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  406 (461)
                      .+....+++.+.+.    . .++    ....+....++..+.+ ...+..+.+..|.+|++.|+++.|+......+++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i  400 (451)
T PF00083_consen  321 IGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFI  400 (451)
T ss_pred             cccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccc
Confidence            33333333333221    1 111    1122222222222222 345666678899999999999999999999999999


Q ss_pred             ccceeeeeecccCCchHHHHHHhHHHHHHHH-HHHHHHHhhHhHh
Q psy15069        407 GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV-MLFVIPSLQSYLL  450 (461)
Q Consensus       407 gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~-~~~~~~~~~~~~~  450 (461)
                      +|.+...+.+..+ ....+.+.++++++..+ ..+++|+.+.+..
T Consensus       401 ~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l  444 (451)
T PF00083_consen  401 IPFLFPYLFNNLG-GWGVFLIFAGVCLIAIIFVYFFLPETKGKTL  444 (451)
T ss_pred             ccccccccccccc-ccccchhhHHHHHHHHhheeEEEeeCCCCCH
Confidence            9999999988765 23444454544444444 4445555554433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.90  E-value=9.5e-22  Score=195.24  Aligned_cols=355  Identities=17%  Similarity=0.158  Sum_probs=255.9

Q ss_pred             HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeeh-hhHHHHHHHHHhhcc-cchhhHHHHhhccccccccccchhHHHHH
Q psy15069         25 TSWIASILVGVTLCSGPISSAFVNKYGCRNVTIC-GAILGSACLAVSVFA-KNVITLCITIGFGTGLGFGLIYLPAIVSV  102 (461)
Q Consensus        25 ~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~-g~~~~~~~~~l~~~~-~~~~~l~i~~~~l~G~g~~~~~~~~~~~~  102 (461)
                      .+...++..+...+..|+.|.++|+-|+||-++. ..+++.++.++..+. ++.|.+...+-++.-++.....+.-.+++
T Consensus        72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L  151 (477)
T PF11700_consen   72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL  151 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4677888889999999999999999998776544 445555566666664 44444433332333345444445555566


Q ss_pred             Hhhh-hccc--------------------------hhhhhhhccchhhhHHHHhHHHHHHHHh--------hchhHHHHH
Q psy15069        103 TCYF-ERLR--------------------------SLATGIAVCGSGLGTIIFAPIIDYTVRE--------YGWKITLLV  147 (461)
Q Consensus       103 ~~~f-~~~r--------------------------g~a~gi~~~~~~lg~~i~~~l~~~l~~~--------~gw~~~f~i  147 (461)
                      .+.. ++++                          ++..+...+...+|+++...+.-.+...        .+-|..+.+
T Consensus       152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~  231 (477)
T PF11700_consen  152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI  231 (477)
T ss_pred             HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence            6665 4555                          8999998888888888877766665432        235777888


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcccccccc
Q psy15069        148 LSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSK  227 (461)
Q Consensus       148 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (461)
                      .|+--++..+...++.|+++.++..+...+                 .+.                              
T Consensus       232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~-----------------~~~------------------------------  264 (477)
T PF11700_consen  232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSS-----------------YLR------------------------------  264 (477)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCCCcchh-----------------HHH------------------------------
Confidence            877766665555555554433210000000                 000                              


Q ss_pred             CCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHH
Q psy15069        228 ATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLI  306 (461)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~  306 (461)
                                      ..-++.++..     ++.-|.|.....++++++..-+...+......|. +++|++..+...+.
T Consensus       265 ----------------~g~~~l~~t~-----k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~  323 (477)
T PF11700_consen  265 ----------------FGFKRLWRTF-----KEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFG  323 (477)
T ss_pred             ----------------HHHHHHHHHH-----HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHH
Confidence                            0001111222     2346778888899999999999999999999999 68999999999999


Q ss_pred             HHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh--------hhhHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069        307 SIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF--------CYNYVELAIYAGVFGAMIGAYVGLTSV  378 (461)
Q Consensus       307 ~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~g~~~~~~~~~~~~  378 (461)
                      .+..+.+++|.+++|++.||+|.|++.++..++....+..+.-.+        .++.+.+++..++.|++.|..++..-+
T Consensus       324 l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs  403 (477)
T PF11700_consen  324 LVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRS  403 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            999999999999999999999888433333333333222222222        457788999999999999999999999


Q ss_pred             HHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069        379 ILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS  447 (461)
Q Consensus       379 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~  447 (461)
                      +..++.|+++.+..+|++.+.....+.+||.+.|.+.|.+|+.+..+....++.+++.++.+.++..+.
T Consensus       404 ~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g  472 (477)
T PF11700_consen  404 LFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG  472 (477)
T ss_pred             HHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence            999999999999999999999999999999999999999999999999999998888888766654443

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>KOG4686|consensus

Probab=99.90  E-value=9e-24  Score=185.69  Aligned_cols=365  Identities=17%  Similarity=0.191  Sum_probs=248.7

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhh---cccchhhHHHHhh
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSV---FAKNVITLCITIG   84 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~---~~~~~~~l~i~~~   84 (461)
                      .+..++.+|.+++.++..+++|++.....+...+.|+++|| +|.|...++-+++..++-+..+   ..+.+|.+... |
T Consensus        65 alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~G-R  143 (459)
T KOG4686|consen   65 ALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAG-R  143 (459)
T ss_pred             hhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhh-h
Confidence            34566777888899999999999999999999999999995 6777666666666666665543   34678888875 9


Q ss_pred             ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHH----HhHHHHHHHHhhc---hh--HHHH-HHHHHHH
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTII----FAPIIDYTVREYG---WK--ITLL-VLSVTVL  153 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i----~~~l~~~l~~~~g---w~--~~f~-i~~~~~l  153 (461)
                      |+.|+|.-...++-..+...||+ |+.+.++|+..+..-+|..+    .|++...+-..++   -.  ...+ +.+..|.
T Consensus       144 F~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~  223 (459)
T KOG4686|consen  144 FLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCK  223 (459)
T ss_pred             eeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence            99999988878888888999995 89999999988777777655    4444444333221   00  1111 1122222


Q ss_pred             HHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCC
Q psy15069        154 SAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPES  233 (461)
Q Consensus       154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (461)
                      ...++.+..--.++ ..|           +..|++.                                       ++ ..
T Consensus       224 ~slical~lg~~D~-rAe-----------rilh~e~---------------------------------------g~-~G  251 (459)
T KOG4686|consen  224 QSLICALSLGLSDD-RAE-----------RILHLEE---------------------------------------GF-LG  251 (459)
T ss_pred             HHHHHHHHhhhhhh-HHH-----------HHHhhhc---------------------------------------Cc-cc
Confidence            22333222111110 000           0000000                                       00 00


Q ss_pred             CCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhh
Q psy15069        234 ESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAA  312 (461)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~  312 (461)
                      ++               .++.+   .. --.|.+|.+.+..++.+.+..-+.+.-|.+. +.+|+|+..++.+.+.....
T Consensus       252 e~---------------pkLtd---v~-~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~I  312 (459)
T KOG4686|consen  252 EE---------------PKLTD---VN-TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGI  312 (459)
T ss_pred             CC---------------ccccc---cc-ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhh
Confidence            00               00110   01 1256799999999999988888888888888 78899999999999999999


Q ss_pred             hhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069        313 NMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA  392 (461)
Q Consensus       313 ~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (461)
                      ..+.++++|.++||.|++-.++...+. ....+-..  +.-+.+.-+..+.+.|+.....-...+..++.++|+++.|++
T Consensus       313 sav~spvfg~i~Dk~G~n~~wv~~a~~-~tl~~H~~--l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTa  389 (459)
T KOG4686|consen  313 SAVLSPVFGAISDKYGFNLWWVASACI-LTLLGHSG--LFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTA  389 (459)
T ss_pred             hhhhhhhHHHhHhhhcceehhHHHHHH-HHHHHhhh--HHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcch
Confidence            999999999999998877666543222 21111111  122455556788899999888777788889999999999999


Q ss_pred             HHHHHHHHHhhhhhccceeeeeecccCCchHH---HHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069        393 FGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA---FFLAGGAIFVSGVMLFVIPSLQSY  448 (461)
Q Consensus       393 ~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~---f~~~~~~~l~~~~~~~~~~~~~~~  448 (461)
                      +|....++++|-++.|+++|.+.|..|+|.+.   |+..+.+.+....+.+.+-++++.
T Consensus       390 ygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~g  448 (459)
T KOG4686|consen  390 YGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQSG  448 (459)
T ss_pred             HHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheeccccC
Confidence            99999999999999999999999998877553   444444555555555554444433

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.90  E-value=6.6e-22  Score=192.80  Aligned_cols=353  Identities=14%  Similarity=0.171  Sum_probs=247.0

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcC-cceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYG-CRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT   87 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~   87 (461)
                      .++|.+.++.|.|..|+|.+.++..+...+++++.|.++||++ +|+++.+..++.++...+..+.++++.+++. -++.
T Consensus        23 p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~-~~l~  101 (400)
T PF03825_consen   23 PYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVI-MLLF  101 (400)
T ss_pred             HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHH
Confidence            3456667888999999999999999999999999999999986 5777878778888877777888888877764 3555


Q ss_pred             cccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHH-HHHHHhhch---hHHHHHHHHHHHHHHHHHhhcc
Q psy15069         88 GLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPII-DYTVREYGW---KITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        88 G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~-~~l~~~~gw---~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      .+......+..-++..++. ++++.-.|-.-...++|.+++.... ..+....++   ...+++.++..++..... +..
T Consensus       102 ~~~~~p~~pl~dsi~~~~~-~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~l  179 (400)
T PF03825_consen  102 SFFFSPTMPLSDSIALSYL-GDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFL  179 (400)
T ss_pred             HHHHccHHHHHHHHHHHHc-ccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhC
Confidence            5554444444444444433 3566777777777888877775542 223332333   234555554443333222 233


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      |+.+.+++++++                                                            .+      
T Consensus       180 p~~~~~~~~~~~------------------------------------------------------------~~------  193 (400)
T PF03825_consen  180 PKTPPKRSAKES------------------------------------------------------------VK------  193 (400)
T ss_pred             CCCccccccCCC------------------------------------------------------------cc------
Confidence            443311100000                                                            00      


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhC-CCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRG-VTRSNASSLISIVGAANMVSRVILGY  322 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~g~~~~g~  322 (461)
                         +....+.     .+++|+|++....+..++.......+.++.+.|+++.| .+....+.++++..++.++.-...++
T Consensus       194 ---~~~~~~~-----~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~  265 (400)
T PF03825_consen  194 ---KLLGLDA-----LKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGR  265 (400)
T ss_pred             ---cccchHH-----HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence               0000111     24799999999888888888888889999999999988 78888898899999999999999999


Q ss_pred             ccCCCCcchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHH----HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069        323 ISDRPCVNRLYIYNGCLAICGAATVICAFC-YNYVELAIY----AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL  397 (461)
Q Consensus       323 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  397 (461)
                      +..|+|.+  .++.++++...+=..+.... ++.+..+..    ..++|+..+........++.+..|++.|+++.++++
T Consensus       266 ~~~r~g~~--~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~  343 (400)
T PF03825_consen  266 FLKRFGIK--WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYS  343 (400)
T ss_pred             HHHhcCHH--HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHH
Confidence            99996544  44556666667666666665 444443332    346999999999999999999999999999999988


Q ss_pred             HH-HHhhhhhccceeeeeecccC-----CchHHHHHHhHHHHHHHHHHH
Q psy15069        398 LF-QGIASLVGPPIAGFLYDSTL-----SYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       398 ~~-~~~g~~~gp~i~g~l~~~~g-----~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      .. .++|..+|..++|+++|+.|     .|...+.+.+++.++..+++.
T Consensus       344 ~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~  392 (400)
T PF03825_consen  344 ALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV  392 (400)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            76 57999999999999999875     233455555555555444443

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.89  E-value=1.4e-21  Score=187.15  Aligned_cols=354  Identities=15%  Similarity=0.127  Sum_probs=239.0

Q ss_pred             hHHHHh-HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHH--HHH-HHhhcc----cchhhHHHH
Q psy15069         11 FIEFTK-VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGS--ACL-AVSVFA----KNVITLCIT   82 (461)
Q Consensus        11 ~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~--~~~-~l~~~~----~~~~~l~i~   82 (461)
                      .|-+.+ +.|+|.+++|.++++..+...+.+|+.|.+.||+|.||-++.......  .+. +...+.    .|.+.-.+ 
T Consensus        30 ~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~i-  108 (412)
T PF01306_consen   30 FPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAI-  108 (412)
T ss_dssp             HHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHH-
T ss_pred             HHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            344455 489999999999999999999999999999999998776544332222  222 221221    23332222 


Q ss_pred             hhccccccccccchhHHHHHHhhh---hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYF---ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFG  159 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f---~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~  159 (461)
                         +.|+..+..+.+...+...+.   .|+.+.-.|=.-+..++|.+++..++|.+.+ .+-+..|++..+..++..++.
T Consensus       109 ---ig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll  184 (412)
T PF01306_consen  109 ---IGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLL  184 (412)
T ss_dssp             ---HTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHH
Confidence               223444444544544443333   3556677777888999999999999999986 566777887766666555555


Q ss_pred             hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069        160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (461)
                      ++.+|+.+.+.+  ..++                                                        ++.++ 
T Consensus       185 ~~~~~~~~~~~~--~~~~--------------------------------------------------------~~~~~-  205 (412)
T PF01306_consen  185 LLLKPDVPPQAE--VADA--------------------------------------------------------LGAKK-  205 (412)
T ss_dssp             HSS---SSSSS---SSTT--------------------------------------------------------SSS---
T ss_pred             HHcCCcCchhhh--hhcc--------------------------------------------------------cccCC-
Confidence            555544321110  0000                                                        00000 


Q ss_pred             cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH----hCCCchhhHHHHHHHhhhhhh
Q psy15069        240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ----RGVTRSNASSLISIVGAANMV  315 (461)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~  315 (461)
                               .+.+.++.  .+++|+|++|.+.+........+.++....|.|...    .+.+....|.+.+...+..++
T Consensus       206 ---------~~~~~~~~--~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~  274 (412)
T PF01306_consen  206 ---------DKVSLKDV--LSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEAL  274 (412)
T ss_dssp             -------------HHHH--HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCcHHHH--HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHH
Confidence                     00111111  247899999998887777777777776666766644    344556788899999999999


Q ss_pred             hhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069        316 SRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL  395 (461)
Q Consensus       316 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  395 (461)
                      ...+..++.+|+|.|+.  +.++..++.+=...+++.++.+.+.+.-.++|+-.........-++++.+|++..++.+.+
T Consensus       275 ~m~~~p~li~rig~k~~--Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v  352 (412)
T PF01306_consen  275 MMFFSPWLINRIGAKNL--LLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLV  352 (412)
T ss_dssp             HHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHH
T ss_pred             HHHHHHHHHHhcChHhH--HHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHH
Confidence            99999999999655544  4456667777788888999999999999999999998888889999999999988999988


Q ss_pred             H-HHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        396 L-LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       396 ~-~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      . +...++|.++.+.++|.++|+.| ++..|++.+.+.+...+...+.
T Consensus       353 ~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~  399 (412)
T PF01306_consen  353 GFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFT  399 (412)
T ss_dssp             HHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheee
Confidence            5 67788999999999999999996 8888888877766655554443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>KOG0254|consensus

Probab=99.89  E-value=1.9e-22  Score=205.06  Aligned_cols=377  Identities=16%  Similarity=0.164  Sum_probs=245.2

Q ss_pred             cHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHH
Q psy15069         24 VTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVT  103 (461)
Q Consensus        24 ~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~  103 (461)
                      +.+++.++..++..++++++|++.|++|||+.++.+.+++.++.+++++++|+++++++ |+++|+|.|........+++
T Consensus        90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~G-R~l~G~g~G~~~~~~piy~s  168 (513)
T KOG0254|consen   90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVG-RILTGLGVGGASVLAPVYIS  168 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHHhccchhhhhhcchhhHh
Confidence            45899999999999999999999999999999999999999999999999999999986 99999999999999999999


Q ss_pred             hhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh--hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCC
Q psy15069        104 CYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALP  180 (461)
Q Consensus       104 ~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~  180 (461)
                      |..| +.||...++.+....+|.+++.. .+...++  ++||..+.+..+.+++..++ +++.|+  +|++.-++     
T Consensus       169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~-~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pe--sp~~L~~~-----  239 (513)
T KOG0254|consen  169 EIAPAHIRGTLVSLYQLFITIGILLGYC-INYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPE--SPRWLIEK-----  239 (513)
T ss_pred             hcCChhhhHHHHHHHHHHHHHHHHHHHH-HhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCC--ChHHHHHc-----
Confidence            9986 68999999999999999888844 4444443  48999988888888887777 666653  34421110     


Q ss_pred             cccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCC---Cccc---ccccccCCchhhhhHh
Q psy15069        181 HLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESE---STED---KTTCLNLSDDTKQTLR  254 (461)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~  254 (461)
                             +..++.+...+.                           -++.+..+   |.++   +........+.+....
T Consensus       240 -------g~~~~a~~~l~~---------------------------l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (513)
T KOG0254|consen  240 -------GRLEEAKRSLKR---------------------------LRGLSPEDVEVELELLKIKLLVEAEVAEGKASWG  285 (513)
T ss_pred             -------CChHHHHHHHHH---------------------------HhCCCCcchHHHHHHHHHHHHHhhhcccccccHH
Confidence                   000000000000                           00000000   0000   0000000000001122


Q ss_pred             hhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHH
Q psy15069        255 EMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYI  334 (461)
Q Consensus       255 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~  334 (461)
                      +... +..+++.++...+..+.+..++.....|.+.+++..|.+... .....+.++.++++..++..+.||+|||+.++
T Consensus       286 ~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll  363 (513)
T KOG0254|consen  286 ELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLL  363 (513)
T ss_pred             HhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence            2222 345566667778888888888899999999999998887554 45555677778888888899999976555444


Q ss_pred             HHHHHHHHHHHHHHhhhhh-------------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069        335 YNGCLAICGAATVICAFCY-------------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG  401 (461)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  401 (461)
                        .+...+.++.+++....             ....+....+....+.....++.+.+..|.+|.+.|+++.++......
T Consensus       364 --~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~  441 (513)
T KOG0254|consen  364 --FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNW  441 (513)
T ss_pred             --HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHH
Confidence              44444444444333211             111222222233333334566777788999999999999999888887


Q ss_pred             hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHH--HHHHHHHhhHhH
Q psy15069        402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV--MLFVIPSLQSYL  449 (461)
Q Consensus       402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~--~~~~~~~~~~~~  449 (461)
                      +...+-....-.+.+..+ ....|...+..+.+...  ..+++|+.+.+.
T Consensus       442 ~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~fv~~~~pETkg~s  490 (513)
T KOG0254|consen  442 LWNFLISFFFPFITEALG-IGGTFGYFGGICLLSLIIFVFFFVPETKGLT  490 (513)
T ss_pred             HHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHHHHHHheEEcccCCCCc
Confidence            776555444333333322 23445454444444444  455556555443

>KOG0252|consensus

Probab=99.88  E-value=1.9e-22  Score=189.29  Aligned_cols=382  Identities=15%  Similarity=0.100  Sum_probs=244.4

Q ss_pred             CCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc------chhhHHHHhhccccccccc
Q psy15069         20 EGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK------NVITLCITIGFGTGLGFGL   93 (461)
Q Consensus        20 ~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~------~~~~l~i~~~~l~G~g~~~   93 (461)
                      .++...+.+..+.+++..++|++.|++.||+|||+++...+++..++.++++++.      +.-+.+.++|++.|+|.|.
T Consensus        81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG  160 (538)
T KOG0252|consen   81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG  160 (538)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence            4566788999999999999999999999999999999999999999998877753      2223333479999999999


Q ss_pred             cchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHh---------------hchhHHHHHHHHHHHHHHH
Q psy15069         94 IYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE---------------YGWKITLLVLSVTVLSAVL  157 (461)
Q Consensus        94 ~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~---------------~gw~~~f~i~~~~~l~~~i  157 (461)
                      -||.+.++.+|.. .++||...+...+..++|...+.++.-.+...               +=||..|.+..+..+.+..
T Consensus       161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly  240 (538)
T KOG0252|consen  161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY  240 (538)
T ss_pred             CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998 47899999999999888887777666655431               1288666555444444333


Q ss_pred             HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069        158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (461)
                      ..+. .|++++-+..              ++  +|..+..++                          ..|+.+..-+++
T Consensus       241 ~Rl~-M~Et~~Y~al--------------~~--~~~~~a~~d--------------------------~~k~~~~~~~~~  277 (538)
T KOG0252|consen  241 FRLK-MPETARYTAL--------------VS--KKLKQAAGD--------------------------MKKVLSVDIEAE  277 (538)
T ss_pred             hhhc-CCcchhHHHH--------------hh--cCHhhhhhc--------------------------cccccccccchh
Confidence            2222 2222111100              00  000000000                          000000000000


Q ss_pred             cccccc-cCCchhhhhHhhhhcccccc--chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHH--------HH
Q psy15069        238 DKTTCL-NLSDDTKQTLREMLDMELLR--DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASS--------LI  306 (461)
Q Consensus       238 ~~~~~~-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~  306 (461)
                      +..... ..+......+.+    ..++  -+.....+...|+.-.++|....+...+++..|+.+.+...        ..
T Consensus       278 ~~~~~~~~~~~~~~~~F~~----~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~  353 (538)
T KOG0252|consen  278 STAESDVPPPSNSFGLFSR----LFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGN  353 (538)
T ss_pred             hccccCCCCcccccchHHH----HHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHH
Confidence            000000 000000011111    1111  13445566777888888899999999999888876655444        22


Q ss_pred             HH-HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh-HH---HHHHH-HHHHhhhhhhHHHHHHHHH
Q psy15069        307 SI-VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN-YV---ELAIY-AGVFGAMIGAYVGLTSVIL  380 (461)
Q Consensus       307 ~~-~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~-~~l~g~~~~~~~~~~~~~~  380 (461)
                      .+ ...+.+.|-++...++|++|  |+++...+++++.+..+.+....+ ..   ...+. .+.+-++..........+.
T Consensus       354 ~iia~~~~vPGyw~tv~~id~iG--Rk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivp  431 (538)
T KOG0252|consen  354 LIIAVCSTVPGYWFTVYFIDIIG--RKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVP  431 (538)
T ss_pred             HHHHHHccCCceeEEEEEeehhh--hHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEee
Confidence            22 23345558888999999954  555555677777776666655433 11   11111 1111122222233344567


Q ss_pred             HHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec-----ccCCchHHHHHHhHHHHHHHHHHHHHHHhhHhHhh
Q psy15069        381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD-----STLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLK  451 (461)
Q Consensus       381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~-----~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~  451 (461)
                      +|.+|.+.|++..|+....+-+|+++|....+++.+     .. +.+.+|++.+.+.+++.+..+++++.+++...
T Consensus       432 aE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~-g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~le  506 (538)
T KOG0252|consen  432 AEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNI-GVRNVFIILAGCMLLGILFTLLIPETKGKSLE  506 (538)
T ss_pred             hhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccc-cchHHHHHHHHHHHHhHheeEEeecccccCHH
Confidence            899999999999999999999999999999999998     54 48999999999999999998888865555433

>KOG0255|consensus

Probab=99.88  E-value=6.5e-22  Score=202.06  Aligned_cols=382  Identities=15%  Similarity=0.116  Sum_probs=240.0

Q ss_pred             HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069         15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI   94 (461)
Q Consensus        15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~   94 (461)
                      .+.++.+.....+..+++.++..++.++.|.+.||+|||++++.+.++..++.++.++++|++.+++ +|++.|++.+..
T Consensus       110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~-~Rfl~G~~~~~~  188 (521)
T KOG0255|consen  110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLI-FRFLSGFFGSGP  188 (521)
T ss_pred             hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-HHHHHHhhccch
Confidence            3567788899999999999999999999999999999999999999999999999999999999998 599999999999


Q ss_pred             chhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCc
Q psy15069         95 YLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEP  173 (461)
Q Consensus        95 ~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~  173 (461)
                      ...+..++.|++ ||+|+.++.+ ......++.+++++++++.+  +||+.+++..+..++.++. +++.  +|+|++..
T Consensus       189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~--~Es~rwl~  262 (521)
T KOG0255|consen  189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLP--PESPRWLL  262 (521)
T ss_pred             hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHcc--CcChHHHH
Confidence            999999999999 7999999999 77777888899999999887  9999999999888877665 2332  23444322


Q ss_pred             ccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhH
Q psy15069        174 VEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTL  253 (461)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (461)
                      .+.+..+....        .++..+.                         + .+.....++.++.. .. .+...+...
T Consensus       263 ~~g~~~~a~~~--------l~~~a~~-------------------------n-~~~~~~~~~~~~~~-~~-~~~~~~~~~  306 (521)
T KOG0255|consen  263 SKGRIDEAIKI--------LKKIAKL-------------------------N-GRKLSVKELLRLEL-LL-RPLKLLFTE  306 (521)
T ss_pred             HcCchHHHHHH--------HHHHHhh-------------------------c-CCCCCcHHHHHHHH-Hh-hHhhhhccC
Confidence            11110000000        0000000                         0 00000000000000 00 000000000


Q ss_pred             hhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhH
Q psy15069        254 REMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLY  333 (461)
Q Consensus       254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~  333 (461)
                      ++.....+++.|++....+...+..+.+.....-++.....+|.+   ........+.....+....+...|+.  +|+.
T Consensus       307 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~--gR~~  381 (521)
T KOG0255|consen  307 PKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGN---IYLNFTLSGLVELPAYFRNGLLLPEF--GRRP  381 (521)
T ss_pred             CCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCch---HHHHHHHHHHHHhhHHHHHHHHHHHh--CcHH
Confidence            111123455665433322222222222222222222223444433   33444455556677777778999995  4555


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhHH---HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccce
Q psy15069        334 IYNGCLAICGAATVICAFCYNYV---ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPI  410 (461)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i  410 (461)
                      ....+..+.+++++...+.....   ...+...+..++.+..+........|++|+..|..+.+..+....++++++|.+
T Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~  461 (521)
T KOG0255|consen  382 PLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLF  461 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55566666677766666554322   344444555555666666668889999999999999999999999999999988


Q ss_pred             eeeeecccCCchHHHHHHhHHHHHHHHHH-HHHHHhh
Q psy15069        411 AGFLYDSTLSYSPAFFLAGGAIFVSGVML-FVIPSLQ  446 (461)
Q Consensus       411 ~g~l~~~~g~~~~~f~~~~~~~l~~~~~~-~~~~~~~  446 (461)
                      .-......  ....+...+.+..+..++. +++|+.+
T Consensus       462 ~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~lpet~  496 (521)
T KOG0255|consen  462 PLLLRQMF--PLLGLILFGWLALLLGLLSLLLLPETK  496 (521)
T ss_pred             HHHHhhhc--ccchHHHHHHHHHHHHHHHHhcCcccC
Confidence            64333321  2222222344444444443 5555544

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.88  E-value=3.5e-21  Score=194.03  Aligned_cols=336  Identities=13%  Similarity=0.093  Sum_probs=225.3

Q ss_pred             hHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh----hcCc-ceeeehhhHHHHHHHHHhhcccc------hhhH
Q psy15069         11 FIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN----KYGC-RNVTICGAILGSACLAVSVFAKN------VITL   79 (461)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~G~-r~~~~~g~~~~~~~~~l~~~~~~------~~~l   79 (461)
                      ...+.+.+|++...+|.++.+.-+...+..|+.|.+.|    |+|| |+.++.+.+..+++.+++...++      ++.+
T Consensus        30 ~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~  109 (473)
T PRK10429         30 MYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFV  109 (473)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHH
Confidence            44455667999999999999999999999999999999    5698 67788888888888766644332      2233


Q ss_pred             HHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHHh-------hchhHHHHHHHH
Q psy15069         80 CITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE-------YGWKITLLVLSV  150 (461)
Q Consensus        80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~-------~gw~~~f~i~~~  150 (461)
                      ++. -++.+++..+..++-.++..+..  +++|.+..++...+.++|+++.+.+...+.+.       .||+....+.++
T Consensus       110 ~~~-~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~  188 (473)
T PRK10429        110 CVT-YILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA  188 (473)
T ss_pred             HHH-HHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence            333 25567777777777777888876  58899999987777777766665554433322       357777777777


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCC
Q psy15069        151 TVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATV  230 (461)
Q Consensus       151 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (461)
                      +.++..+...+..++++.+++++.                                                        
T Consensus       189 ~~~~~~~~~~~~~~e~~~~~~~~~--------------------------------------------------------  212 (473)
T PRK10429        189 FFIVSTIITLRNVHEVYSSDNQVS--------------------------------------------------------  212 (473)
T ss_pred             HHHHHHHHHHcCceecCCcccccc--------------------------------------------------------
Confidence            666555444443332211110000                                                        


Q ss_pred             CCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHh
Q psy15069        231 PESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVG  310 (461)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~  310 (461)
                         ++++        +.+.++..+     .+++||.++.+++..++.....+....+.+.|.+....+....+.+.+...
T Consensus       213 ---~~~~--------~~~~~~~~~-----~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~  276 (473)
T PRK10429        213 ---AEGS--------HLTLKDIVA-----LIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAG  276 (473)
T ss_pred             ---cccc--------CCCHHHHHH-----HHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHH
Confidence               0000        011122222     256898888888877777776666666666555544445666777777777


Q ss_pred             hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH-HHHHHhh--hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC--
Q psy15069        311 AANMVSRVILGYISDRPCVNRLYIYNGCLAICG-AATVICA--FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG--  385 (461)
Q Consensus       311 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--  385 (461)
                      ++.+++.++.+++.||+|+++.......+.+.+ +..+...  ..++.+.+++..++.|++.+...+..++++.|..+  
T Consensus       277 i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~  356 (473)
T PRK10429        277 AANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYG  356 (473)
T ss_pred             HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            899999999999999987666554322221211 1111111  12345566667778889999888888899998855  


Q ss_pred             -----ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        386 -----LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       386 -----~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                           .+..|..+|...+...++..+++.+.|++.+..|
T Consensus       357 e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G  395 (473)
T PRK10429        357 EYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG  395 (473)
T ss_pred             hHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence                 4456668999999999999999999999987654

>KOG0253|consensus

Probab=99.87  E-value=5e-22  Score=181.00  Aligned_cols=407  Identities=14%  Similarity=0.148  Sum_probs=250.4

Q ss_pred             eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069          8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT   87 (461)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~   87 (461)
                      +.+.|...+..+.+..+.+++......++.+++.+.|.+.|++|||+......+..++...+.++++|+..+++ +|-+.
T Consensus        98 s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~-f~~l~  176 (528)
T KOG0253|consen   98 SLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCV-FRALW  176 (528)
T ss_pred             HHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhH-HHHHH
Confidence            45567778888999999999999999999999999999999999999999999999999999999999999998 58999


Q ss_pred             cccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15069         88 GLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLE  166 (461)
Q Consensus        88 G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~  166 (461)
                      |+|.|. .|...++-.+.-| .+|..-+=.. ..+.+|.+....+.-..+.++||||.++..+....+...+ .++.  +
T Consensus       177 ~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f-~~w~--~  251 (528)
T KOG0253|consen  177 GFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF-LVWV--Y  251 (528)
T ss_pred             hccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH-Hhhc--c
Confidence            999988 5555444444445 6777766555 8899999999888888899999999988887544333322 2233  3


Q ss_pred             CCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCC
Q psy15069        167 EQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLS  246 (461)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (461)
                      ++|+-.--+.++.+.-...++-     ...++.    ++..+..... .++..+++.++..            ++-.++.
T Consensus       252 ESpRf~~~~G~~~kAletL~ki-----ArmNg~----qlplgvl~~s-~~~~~e~e~~~~~------------~~~~~a~  309 (528)
T KOG0253|consen  252 ESPRFYLAKGDDYKALETLHKI-----ARMNGK----QLPLGVLESS-AIDRQEQEESDLD------------DSKSSAA  309 (528)
T ss_pred             cCcchhhhcCChHHHHHHHHHH-----HHhcCC----CCCcceeeee-hhhhhhhhhhchh------------hhhhccc
Confidence            4444100000000000000000     000000    0000000000 0000000000000            0000011


Q ss_pred             chhhhhHhhhhccccccch-hHHHHHHHHHHHhhccccch--------------hhHhhHHHH-h--CCCchhhHHHHHH
Q psy15069        247 DDTKQTLREMLDMELLRDP-IFILFTISNIFTSIGFNVPY--------------VYIVKLAEQ-R--GVTRSNASSLISI  308 (461)
Q Consensus       247 ~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-~--g~s~~~~~~~~~~  308 (461)
                      ++.+.....+..+.+.|.. ..|.++.+..+.+.+...+.              -..|.+++. .  -.+...--.=..+
T Consensus       310 ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdlli  389 (528)
T KOG0253|consen  310 KEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLI  389 (528)
T ss_pred             cccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHH
Confidence            1222233333332222221 12333333333332221111              123333322 0  1222222233446


Q ss_pred             HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc
Q psy15069        309 VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR  388 (461)
Q Consensus       309 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~  388 (461)
                      ..+..+.|.++.+++.||+|||+.  +..+++++++++++...+.+.-...++.+..-++..+.+...+.+..|.+|++.
T Consensus       390 tslaefPGlLIt~~iverlGRKkT--Mal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTav  467 (528)
T KOG0253|consen  390 TSLAEFPGLLITGVIVERLGRKKT--MALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAV  467 (528)
T ss_pred             HHHhhCCchhHHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhh
Confidence            678899999999999999776655  446777778777776666665556666677777777778888999999999999


Q ss_pred             hhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069        389 LTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS  447 (461)
Q Consensus       389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~  447 (461)
                      |+++.|....+..+|+++.|.++ ...+.  +-..+..+.+.+++++.+...++|...|
T Consensus       468 RatgvGtcSsmaRIggI~~p~iA-~~~e~--s~sl~i~vy~~~~ilagIavcffPiEtk  523 (528)
T KOG0253|consen  468 RATGVGTCSSMARIGGIFSPVIA-MRAEL--STSLPIFVYGALFILAGIAVCFFPIETK  523 (528)
T ss_pred             hhcchhhhhhHHhhhhhhhhHHH-HHhcc--ceeehHHHHHHHHHHHHHHheeeeeccC
Confidence            99999999999999999999998 33333  3445555666677777666656655443

>TIGR00788 fbt folate/biopterin transporter

Probab=99.87  E-value=3.4e-21  Score=193.00  Aligned_cols=362  Identities=9%  Similarity=-0.036  Sum_probs=236.6

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcC-----cceeeehhhHHH-HHHHHHhhcccchhhHHHHh
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYG-----CRNVTICGAILG-SACLAVSVFAKNVITLCITI   83 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----~r~~~~~g~~~~-~~~~~l~~~~~~~~~l~i~~   83 (461)
                      ..|.+.+++|++.++++...++..+...+ .++.|++.||++     ||+.++++.++. +++....+..++.....+..
T Consensus        48 ~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~  126 (468)
T TIGR00788        48 LSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAF  126 (468)
T ss_pred             hhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence            45556667999999999999999999977 666999999998     777788888777 35555555556655555434


Q ss_pred             hccccccccccchhHHHHHHhhhhccchhhhhhhccc---hhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069         84 GFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG---SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI  160 (461)
Q Consensus        84 ~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~---~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~  160 (461)
                      .++.+++.+...+++-.+..+..++++....+.....   .++|.++++.+++.+.+.+|||..|++.+++.++..+...
T Consensus       127 ~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~  206 (468)
T TIGR00788       127 IFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSN  206 (468)
T ss_pred             HHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence            6888999999888888888888874444433333333   4589999999999999999999999999888877744333


Q ss_pred             hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069        161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (461)
                      ++ ++++.....+.++.  ...+.              .                                 .....   
T Consensus       207 ~~-~E~~~~~~~~~~~~--~~~~~--------------~---------------------------------~~~~~---  233 (468)
T TIGR00788       207 LS-KERRAFVRPRIGTY--LEMNM--------------A---------------------------------LLTLG---  233 (468)
T ss_pred             hc-cccccccccccccc--chhhh--------------h---------------------------------hhhhh---
Confidence            33 33210000000000  00000              0                                 00000   


Q ss_pred             ccccCCchhhhhHhhhhccccccchhHHHHHHHHHH-Hhhccccch-hhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhh
Q psy15069        241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIF-TSIGFNVPY-VYIVKLAEQRGVTRSNASSLISIVGAANMVSRV  318 (461)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~  318 (461)
                          ..+..+....+.  .+.+++|.++...+..++ ......... .++ ...+..|.++.+.|.+....+++.+++..
T Consensus       234 ----~~~~~~~~~~~l--~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~  306 (468)
T TIGR00788       234 ----VLANVKVQILGL--RGAIQLLEIAKPLIFIFLSYANLPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVG  306 (468)
T ss_pred             ----HHHHHHHHHHHH--HHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHH
Confidence                000011111111  124677887765554444 222211111 111 11256899999999999999999999999


Q ss_pred             hhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh----------hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc
Q psy15069        319 ILGYISDRPCVNRLYIYNGCLAICGAATVICAF----------CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR  388 (461)
Q Consensus       319 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~  388 (461)
                      +.+++.+|++.+  .++.++.++.+++.+....          .++.+......++.+++.+..+.....++.+..|++.
T Consensus       307 ~~~~~~~~~~~r--~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~  384 (468)
T TIGR00788       307 GYDRFLKTFPYR--LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC  384 (468)
T ss_pred             HHHHHHhhCCHH--HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc
Confidence            999999886544  3344455554444322211          1233344455677888888878888899999999999


Q ss_pred             hhHHHHHHHHHHHhhhhhccceeeeeecccC----CchHHHHHHhHHHHH
Q psy15069        389 LTNAFGLLLLFQGIASLVGPPIAGFLYDSTL----SYSPAFFLAGGAIFV  434 (461)
Q Consensus       389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g----~~~~~f~~~~~~~l~  434 (461)
                      .|+.+++.+...++|..+++.++|.+.+..|    +|+..+....+..+.
T Consensus       385 egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~  434 (468)
T TIGR00788       385 ESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLA  434 (468)
T ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHH
Confidence            9999999999999999999999999998765    355555444444333

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PRK09848 glucuronide transporter; Provisional

Probab=99.87  E-value=8e-21  Score=190.39  Aligned_cols=329  Identities=12%  Similarity=0.077  Sum_probs=207.4

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc----Ccce-eeehhhHHHHHHHHHh-hcc----cc--hh
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY----GCRN-VTICGAILGSACLAVS-VFA----KN--VI   77 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~----G~r~-~~~~g~~~~~~~~~l~-~~~----~~--~~   77 (461)
                      +.+++++.+|++..++|.+.++..+...+..|+.|.++||.    |||+ .+..+.+...+..++. ...    ++  .+
T Consensus        31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (448)
T PRK09848         31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV  110 (448)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence            45666777899999999999999999999999999999997    6555 4456655555444432 221    11  12


Q ss_pred             hHHHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchh-----hhHHHHhHHHHHHHHh--hchhHHHHHH
Q psy15069         78 TLCITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSG-----LGTIIFAPIIDYTVRE--YGWKITLLVL  148 (461)
Q Consensus        78 ~l~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~-----lg~~i~~~l~~~l~~~--~gw~~~f~i~  148 (461)
                      .+++. -++.+++.++..++..++..+..  +++|.+..++.+.+.+     ++..++|.+.......  .+|.....+.
T Consensus       111 ~~~~~-~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~  189 (448)
T PRK09848        111 YAYLT-YMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVL  189 (448)
T ss_pred             HHHHH-HHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence            22322 25667777777777666656544  4778888777665433     4444555554432110  1122111233


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccC
Q psy15069        149 SVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKA  228 (461)
Q Consensus       149 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (461)
                      ++++++..+......+++  ++++ .                                                      
T Consensus       190 ~v~~~~~~~~~~~~~~e~--~~~~-~------------------------------------------------------  212 (448)
T PRK09848        190 AIAGMVLYFICFKSTREN--VVRI-V------------------------------------------------------  212 (448)
T ss_pred             HHHHHHHHHHHHcCcEec--cCCC-c------------------------------------------------------
Confidence            333332222222221211  1000 0                                                      


Q ss_pred             CCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHH
Q psy15069        229 TVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLIS  307 (461)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~  307 (461)
                            +          +...+...+     .++|||.++...+..++...+........|.|+ +..|.++...++...
T Consensus       213 ------~----------~~~~~~~~~-----~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  271 (448)
T PRK09848        213 ------A----------QPSLKISLQ-----TLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLV  271 (448)
T ss_pred             ------c----------CCCHHHHHH-----HHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHH
Confidence                  0          000112222     368999998888888888777777777777777 456776655555455


Q ss_pred             HHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC
Q psy15069        308 IVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG  385 (461)
Q Consensus       308 ~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~  385 (461)
                      ...++.+++.++.+++.||++.++...  .+.++..++.+.+.+.  .+.+..++..++.|++.+...+...++..|..|
T Consensus       272 ~~~~~~~~~~~l~~~l~~r~g~~~~~~--~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~  349 (448)
T PRK09848        272 QNLVGTVASAPLVPGMVARIGKKNTFL--IGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVE  349 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            556778889999999999976555444  3444444444333333  355666666778899999888888888888876


Q ss_pred             cc-------chhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        386 LD-------RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       386 ~~-------~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                      .+       +.|...|+.++...+|..+|+.+.|.+.+..|
T Consensus       350 ~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G  390 (448)
T PRK09848        350 YGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG  390 (448)
T ss_pred             hhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            43       46899999999999999999999998887654

>TIGR01272 gluP glucose/galactose transporter

Probab=99.87  E-value=1.2e-20  Score=178.96  Aligned_cols=276  Identities=14%  Similarity=0.109  Sum_probs=203.7

Q ss_pred             cccchhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHh------------
Q psy15069         72 FAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE------------  138 (461)
Q Consensus        72 ~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~------------  138 (461)
                      ..++++.+++.+ ++.|.|.+..-+..+.++.+.. +|++.+.+++.++.+++|.+++|.+++.++..            
T Consensus         6 ~~~~~~~~l~~~-f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~   84 (310)
T TIGR01272         6 SQRYYVLFLGAL-FVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA   84 (310)
T ss_pred             HhhHHHHHHHHH-HHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence            446788888875 8999999999999999999887 57899999999999999999999999998842            


Q ss_pred             ----hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCC
Q psy15069        139 ----YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGP  214 (461)
Q Consensus       139 ----~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (461)
                          ..|+++|++++++.++..+...+. +.++.+++++++                                       
T Consensus        85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~-~~p~~~~~~~~~---------------------------------------  124 (310)
T TIGR01272        85 NAEAAKVHTPYLLLAGALAVLAIIFAFL-PLPELQEADVAR---------------------------------------  124 (310)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCCCcccccc---------------------------------------
Confidence                479999998887766655544333 322211100000                                       


Q ss_pred             cccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH
Q psy15069        215 TEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ  294 (461)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (461)
                                        .+++ +       ..   +      .++.+|+|.+++..+..++..........|.+.|+++
T Consensus       125 ------------------~~~~-~-------~~---~------~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~  169 (310)
T TIGR01272       125 ------------------VSSG-D-------TT---Q------KTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSD  169 (310)
T ss_pred             ------------------cccc-c-------cc---c------hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                              0000 0       00   0      0134678888888888888777888999999999954


Q ss_pred             ---hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhh
Q psy15069        295 ---RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGA  371 (461)
Q Consensus       295 ---~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~  371 (461)
                         .|+++.+.+...+.+..+.++|+++.+++.||++.+|...  .+..+..+..++....++... ....++.|++.+.
T Consensus       170 ~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~--~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~  246 (310)
T TIGR01272       170 PHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLA--FNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSI  246 (310)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH--HHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHH
Confidence               5999999999999999999999999999999987555433  344444444433333333333 3456688999999


Q ss_pred             HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069        372 YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG  429 (461)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~  429 (461)
                      .+|...+...+..| ++.+++.++. ....+|++++|++.|.+.|..| .+..+++..
T Consensus       247 i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~~a~~v~~  301 (310)
T TIGR01272       247 MFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQLAFALPV  301 (310)
T ss_pred             HHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-chHHHHHHH
Confidence            99999998888887 4457777775 5677999999999999999875 777776433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.86  E-value=1.6e-20  Score=185.27  Aligned_cols=368  Identities=11%  Similarity=0.071  Sum_probs=252.4

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh----hcCcceeeeh-hhHHHHHHHHHhhcccchhhH-----
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN----KYGCRNVTIC-GAILGSACLAVSVFAKNVITL-----   79 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~G~r~~~~~-g~~~~~~~~~l~~~~~~~~~l-----   79 (461)
                      +.+++.+++|.++..++++..+..+...+.+|+.|.+.|    |+|||+.++. +.+...++.++.+++++++.+     
T Consensus        26 ~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~  105 (477)
T TIGR01301        26 LLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNL  105 (477)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccc
Confidence            456678899999999999999999999999999999999    5999999776 477777777788887765321     


Q ss_pred             ------------HHHhhccccccccccchhHHHHHHhhhh-ccc--hhhhhhhccchhhhHHHHhHHHHHH--HHhh---
Q psy15069         80 ------------CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLR--SLATGIAVCGSGLGTIIFAPIIDYT--VREY---  139 (461)
Q Consensus        80 ------------~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~r--g~a~gi~~~~~~lg~~i~~~l~~~l--~~~~---  139 (461)
                                  ++.+ .+..++.....++..+++.|.+| ++|  +.++++.....++|.++++.+++..  .+.+   
T Consensus       106 ~~~~~~~~i~~~~i~~-~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~  184 (477)
T TIGR01301       106 DKKTKPRAIIVFVVGF-WILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFT  184 (477)
T ss_pred             cccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccc
Confidence                        1111 23334666677788889999985 433  6899999999999999999998865  2211   


Q ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCc
Q psy15069        140 ----------GWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTA  209 (461)
Q Consensus       140 ----------gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (461)
                                +.|..|++.+++.++..+...+..++++.+++++..++    +          .                
T Consensus       185 ~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~----~----------~----------------  234 (477)
T TIGR01301       185 KTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS----E----------A----------------  234 (477)
T ss_pred             cccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh----h----------c----------------
Confidence                      67888998888777777666665554332221000000    0          0                


Q ss_pred             CCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhcccccc-chhHHHHHHHHHHHhhccccchhhH
Q psy15069        210 ISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLR-DPIFILFTISNIFTSIGFNVPYVYI  288 (461)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~  288 (461)
                                 +           ++++.          +.+..+++... .+.+ -|.++.+++..++..++...+..|.
T Consensus       235 -----------~-----------~~~~~----------~~~~~~~~i~~-~~~~mP~~m~~l~~vqffsW~a~f~~~~y~  281 (477)
T TIGR01301       235 -----------A-----------PPSKH----------GEEAFFGELFG-AFKYLPRPVWILLLVTCLNWIAWFPFILFD  281 (477)
T ss_pred             -----------c-----------ccccc----------chhhhHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                       0           00000          00011111111 1111 2467889999999999999999999


Q ss_pred             hhHH-HH-hCCCch------h----hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh--
Q psy15069        289 VKLA-EQ-RGVTRS------N----ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN--  354 (461)
Q Consensus       289 ~~~~-~~-~g~s~~------~----~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  354 (461)
                      .+++ ++ ++-++.      +    ..+....+.+...+.+++..++.+|+|.+ +.+...+.++.+++++...+.++  
T Consensus       282 T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~-k~~~~~s~~~~~~~l~~~~~i~~~~  360 (477)
T TIGR01301       282 TDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG-KRLWGIVNIILAICLAATVLVTYVA  360 (477)
T ss_pred             cHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9988 32 332211      1    23344456666667777888888887632 33334555555555555544332  


Q ss_pred             -------------------HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc--cchhHHHHHHHHHHHhhhhhccceeee
Q psy15069        355 -------------------YVELAIYAGVFGAMIGAYVGLTSVILVDLLGL--DRLTNAFGLLLLFQGIASLVGPPIAGF  413 (461)
Q Consensus       355 -------------------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~gp~i~g~  413 (461)
                                         .+..++.+.+.|+.++..+...++++++..++  ++.|..+|+.|.+..+.+++.....|.
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~  440 (477)
T TIGR01301       361 KNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGP  440 (477)
T ss_pred             hccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence                               36677788899999999999999999999984  566999999999999999999988888


Q ss_pred             eecccC-CchHHHHHHhHHHHHHHHHHHHH
Q psy15069        414 LYDSTL-SYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       414 l~~~~g-~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      +.+..| +....+.+.++..++++++.+.+
T Consensus       441 ~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~  470 (477)
T TIGR01301       441 WDQLFGGGNLPAFVVGAVAAFVSGLLALIL  470 (477)
T ss_pred             HHHHcCCCCeeHHHHHHHHHHHHHHHHHHh
Confidence            666665 35567777888888877776544

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.86  E-value=8.5e-21  Score=188.99  Aligned_cols=331  Identities=17%  Similarity=0.186  Sum_probs=248.6

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh----hcCc-ceeeehhhHHHHHHHHHhhcc-c-------ch
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN----KYGC-RNVTICGAILGSACLAVSVFA-K-------NV   76 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~G~-r~~~~~g~~~~~~~~~l~~~~-~-------~~   76 (461)
                      +.+.+.+.+|+++..+|++..+.-+...+..|+.|.+.|    |+|| |+.++.|.++.+++.+++... +       ..
T Consensus        24 ~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~  103 (428)
T PF13347_consen   24 LLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKL  103 (428)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHH
Confidence            355566667999999999999999999999999999999    8996 555778889999999887766 3       12


Q ss_pred             hhHHHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHHhh-------chhHHHHH
Q psy15069         77 ITLCITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-------GWKITLLV  147 (461)
Q Consensus        77 ~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-------gw~~~f~i  147 (461)
                      ..+.+.+ ++..++......+-.++..+..  +++|.+..+..+.+..+|.++...+...+.+..       ||++...+
T Consensus       104 ~~~~~~~-~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v  182 (428)
T PF13347_consen  104 VWLFVFY-ILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV  182 (428)
T ss_pred             HHHHHHH-HHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence            2334433 5568888888888888888877  378999999998888888876666665555322       69999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcccccccc
Q psy15069        148 LSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSK  227 (461)
Q Consensus       148 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (461)
                      .+++.++..+...+..++++.+.+++++                                                    
T Consensus       183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~~----------------------------------------------------  210 (428)
T PF13347_consen  183 LAIVGLVFFLITFFFVKERSVEVTEQEK----------------------------------------------------  210 (428)
T ss_pred             HHHHHHHHhhhhhheeeecccccccccc----------------------------------------------------
Confidence            9888887776666654431111100000                                                    


Q ss_pred             CCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHH
Q psy15069        228 ATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLI  306 (461)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~  306 (461)
                                        +.+.++..     +.++|||.++.+.+..++...+........+.|.+. .|.+ ...+...
T Consensus       211 ------------------~~~~~~~~-----~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~  266 (428)
T PF13347_consen  211 ------------------KISLRDSL-----RSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFM  266 (428)
T ss_pred             ------------------ccccccch-----hhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHH
Confidence                              00011112     246889999999999999888888888888888754 4544 6777888


Q ss_pred             HHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc
Q psy15069        307 SIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLL  384 (461)
Q Consensus       307 ~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~  384 (461)
                      ....++.+++.++.++++||+|+++...  .+..+.+++.++..+.+  +.+..++..++.|++.+..+...+++++|..
T Consensus       267 ~~~~~~~~v~~~~~~~l~~r~gk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~i  344 (428)
T PF13347_consen  267 LIFFVASIVGSPLWGRLSKRFGKKKVYI--IGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVI  344 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccceeehh--hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccch
Confidence            8889999999999999999987776544  44445555555545544  8888889999999999999999999998887


Q ss_pred             C-------ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        385 G-------LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       385 ~-------~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                      +       +++.|..+|..++...++..+++.+.|.+.+..|
T Consensus       345 d~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G  386 (428)
T PF13347_consen  345 DYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG  386 (428)
T ss_pred             hhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence            6       3456889999999999999999999998887654

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.86  E-value=8.9e-21  Score=189.66  Aligned_cols=376  Identities=15%  Similarity=0.099  Sum_probs=240.0

Q ss_pred             eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069          8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT   87 (461)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~   87 (461)
                      +...+.+..|+|-+ ....|+.+...+...++.|+.|+|.|.+|||.+++.+.++..+|.++++-++|...++.. ..+.
T Consensus        64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag-~~l~  141 (599)
T PF06609_consen   64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAG-MVLY  141 (599)
T ss_pred             HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHH-HHHH
Confidence            34467888889875 667778888999999999999999999999999999999999999999999999999986 6899


Q ss_pred             cccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh-cccC
Q psy15069         88 GLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL-LRPL  165 (461)
Q Consensus        88 G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~-~~~~  165 (461)
                      |+|.|..... ...+.|..| |+|....++.....-....++|.++..+...-+|||.|++..+...+..++.++ ++|+
T Consensus       142 GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP  220 (599)
T PF06609_consen  142 GVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP  220 (599)
T ss_pred             HHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9998766543 445788775 888877776665555555567777777666679999999998877666555443 4443


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccc------------c-ccC-CCCCcCCCCCcccCCccccccccCCCC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVS------------T-SIW-QPSTAISTGPTEVISTQAQIDSKATVP  231 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (461)
                      + .++.+.++..  ..+      .-.|.+.+---.            + +.+ +.+++... .+-.+.-           
T Consensus       221 ~-~~~~~~~~~s--~~~------~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~-VIa~lvi-----------  279 (599)
T PF06609_consen  221 P-RAQLHGRKLS--KRE------QLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAH-VIAPLVI-----------  279 (599)
T ss_pred             c-hhhhccccCc--HHH------HHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcc-chhhHHH-----------
Confidence            2 2111111000  000      000000000000            0 000 00000000 0000000           


Q ss_pred             CCCCcccccccc--cCCchhh-hhHhhhhccccccc-hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCc---hhhH
Q psy15069        232 ESESTEDKTTCL--NLSDDTK-QTLREMLDMELLRD-PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTR---SNAS  303 (461)
Q Consensus       232 ~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~---~~~~  303 (461)
                            . ..+.  -.-.+.. ...+.+++.+++|+ |.+...++..++....++....+.|... .-++-++   ...+
T Consensus       280 ------G-~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~  352 (599)
T PF06609_consen  280 ------G-FVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIG  352 (599)
T ss_pred             ------H-HHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceee
Confidence                  0 0000  0000000 11234566678888 4566666677777777777777777766 3445444   3567


Q ss_pred             HHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q psy15069        304 SLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILV  381 (461)
Q Consensus       304 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~  381 (461)
                      +.....+++..+|..+.|.+..+++ +-|+.+.++.+++.+.+-++..  .++....+...++.|++.|.........++
T Consensus       353 ~~s~~~~fg~~~g~~i~g~l~~~ir-~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~q  431 (599)
T PF06609_consen  353 WISSPVGFGSCAGAVILGLLFSKIR-HIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQ  431 (599)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHcc-chhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeE
Confidence            7778888899999999999998764 3444444444444433222222  234445566778888888887777777777


Q ss_pred             HhcCccchhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069        382 DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY  415 (461)
Q Consensus       382 ~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~  415 (461)
                      -..|+++.+++.|+..++..+|+.+|..+...+.
T Consensus       432 l~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~  465 (599)
T PF06609_consen  432 LIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF  465 (599)
T ss_pred             eeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            7789999999999999999999999887765443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.84  E-value=3.4e-19  Score=176.74  Aligned_cols=398  Identities=14%  Similarity=0.077  Sum_probs=226.8

Q ss_pred             eeeeeehHHH-HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-CcceeeehhhHHHHHHHHHhhccc-chhhHHH
Q psy15069          5 YSFGILFIEF-TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-GCRNVTICGAILGSACLAVSVFAK-NVITLCI   81 (461)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~g~~~~~~~~~l~~~~~-~~~~l~i   81 (461)
                      |.+..++|.+ .+++|.++.+.+.+.+.+.....++.+++|++.||+ |||+++..|.++..++.+++++.. +...+++
T Consensus        26 Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l  105 (493)
T PRK15462         26 YGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYL  105 (493)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence            3344455655 556899999999999999999999999999999999 999999999999999987776543 2222333


Q ss_pred             HhhccccccccccchhHHHHHHhhhhc---cchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q psy15069         82 TIGFGTGLGFGLIYLPAIVSVTCYFER---LRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLF  158 (461)
Q Consensus        82 ~~~~l~G~g~~~~~~~~~~~~~~~f~~---~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~  158 (461)
                      . -.+.++|.|...+...+++.+.+|+   +|..+.++.+++.++|+.++|.+.+.+.+.+||++.|.+.++..++..+.
T Consensus       106 ~-l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~  184 (493)
T PRK15462        106 S-LAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVI  184 (493)
T ss_pred             H-HHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence            2 1334466666666667788999853   68999999999999999999999999999999999999876654444333


Q ss_pred             HhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccc
Q psy15069        159 GILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTED  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (461)
                      .++.++..+....++++    +.+     + ++.......... .           ..-.   . .-..     ...-.+
T Consensus       185 ~~~~~~~l~~~~~~~~~----~~~-----~-~~~~~~~~~~~~-~-----------~~~~---~-~~~~-----~~~~~~  233 (493)
T PRK15462        185 FLCGNRHFTHTRGVNKK----VLR-----A-TNFLLPNWGWLL-V-----------LLVA---T-PALI-----TVLFWK  233 (493)
T ss_pred             HHHhhhhhccCCCCCCC----Cch-----h-hhHHHHHHHHHH-H-----------HHHH---H-HHHH-----HHHHHH
Confidence            33322221110000000    000     0 000000000000 0           0000   0 0000     000000


Q ss_pred             ccccccCC-chhhhh--Hhhhhccc---cccch--hHHHHHHHHHHHhhccccchhhHhhHHHH------hCCCchhhHH
Q psy15069        239 KTTCLNLS-DDTKQT--LREMLDME---LLRDP--IFILFTISNIFTSIGFNVPYVYIVKLAEQ------RGVTRSNASS  304 (461)
Q Consensus       239 ~~~~~~~~-~~~~~~--~~~~~~~~---~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~s~~~~~~  304 (461)
                      +....... ...-..  ...+...+   .-|+|  .+..+.+...+....+.-..+-+..|.++      .|++ -..++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~  312 (493)
T PRK15462        234 EWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAM  312 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHH
Confidence            00000000 000000  00000000   01222  12222232223333332223333344432      1222 23556


Q ss_pred             HHHHHhhhhhhhhhhhhhccCCCCcc-h---h-HHHHHHHHHHHHHHHHhhhh---------hhHHHHHHHHHHHhhhhh
Q psy15069        305 LISIVGAANMVSRVILGYISDRPCVN-R---L-YIYNGCLAICGAATVICAFC---------YNYVELAIYAGVFGAMIG  370 (461)
Q Consensus       305 ~~~~~~~~~~~g~~~~g~l~dr~~~~-~---~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~g~~~~  370 (461)
                      ..++..+..++..++.+++=.|..++ |   . .=+..++++.+++++.+.+.         .+.++++...++++++.-
T Consensus       313 ~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl  392 (493)
T PRK15462        313 FQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL  392 (493)
T ss_pred             HHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHH
Confidence            77888888887887777664332111 1   1 11345666666665554321         256778888889999999


Q ss_pred             hHHHHHHHHHHHhcCccchhHHHHHHHHHH-Hhhhhhccceeeeeecc-----------cCCchHHHHHHhHHHHHH
Q psy15069        371 AYVGLTSVILVDLLGLDRLTNAFGLLLLFQ-GIASLVGPPIAGFLYDS-----------TLSYSPAFFLAGGAIFVS  435 (461)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~~gp~i~g~l~~~-----------~g~~~~~f~~~~~~~l~~  435 (461)
                      ...|+..+.++++.|++.+|..+|...... .+|..++..+.+...+.           ..+|...|...+...++.
T Consensus       393 ~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  469 (493)
T PRK15462        393 FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC  469 (493)
T ss_pred             HHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence            999999999999999999999999987643 56666665555544211           113667888888776655

>PRK11462 putative transporter; Provisional

Probab=99.84  E-value=6.1e-19  Score=176.62  Aligned_cols=329  Identities=12%  Similarity=0.149  Sum_probs=211.5

Q ss_pred             hHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh----cCcc-eeeehhhHHHHHHHHHhhcccc------hhhH
Q psy15069         11 FIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK----YGCR-NVTICGAILGSACLAVSVFAKN------VITL   79 (461)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~G~r-~~~~~g~~~~~~~~~l~~~~~~------~~~l   79 (461)
                      ...+.+.+|++...+|.++.+.-+.-.+.-|+.|.++||    +||| +.++.|.+..+++.+++-..++      +..+
T Consensus        33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~  112 (460)
T PRK11462         33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA  112 (460)
T ss_pred             HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence            344566689999999999999999999999999999995    6875 5567787888888877655543      2233


Q ss_pred             HHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHHhh-------chhHHHHHHHH
Q psy15069         80 CITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-------GWKITLLVLSV  150 (461)
Q Consensus        80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-------gw~~~f~i~~~  150 (461)
                      ++.+ ++..++..+...+-.++..+..  +++|.+.+++...+..+|..+++.+...+.+..       ||+....+.++
T Consensus       113 ~~~~-~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i  191 (460)
T PRK11462        113 AITY-TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV  191 (460)
T ss_pred             HHHH-HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence            3333 4557777777777777777766  589999999999999988888777766555443       57877777777


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCC
Q psy15069        151 TVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATV  230 (461)
Q Consensus       151 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (461)
                      +.++..+...+..+++  ++++++                                                        
T Consensus       192 i~~i~~~i~~~~~kE~--~~~~~~--------------------------------------------------------  213 (460)
T PRK11462        192 VAFMMLAFCFFTTKER--VEAPPT--------------------------------------------------------  213 (460)
T ss_pred             HHHHHHHHHHhcceec--cCCCcc--------------------------------------------------------
Confidence            7666554444332221  110000                                                        


Q ss_pred             CCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHh
Q psy15069        231 PESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVG  310 (461)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~  310 (461)
                                     +.+.++..+     ..++||.++.+....++..............|.+...-+....+.+.....
T Consensus       214 ---------------~~~~~~~l~-----~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~  273 (460)
T PRK11462        214 ---------------TTSMREDLR-----DIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYC  273 (460)
T ss_pred             ---------------CCCHHHHHH-----HHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHH
Confidence                           000112222     357888877766665555555444333333333322223344556677788


Q ss_pred             hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC----
Q psy15069        311 AANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG----  385 (461)
Q Consensus       311 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----  385 (461)
                      ++.+++.+++++++||+++|+........ .......+... ..+.+..++..++.|++.+...++.++++.|..+    
T Consensus       274 i~~iig~~l~~~l~~r~gkk~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~  352 (460)
T PRK11462        274 VGNLIGSALAKPLTDWKCKVTIFWWTNAL-LAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEW  352 (460)
T ss_pred             HHHHHHHHHHHHHHHHhChHHHHHHHHHH-HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence            88999999999999997655443322211 11111111111 1223334455566788777777777777777755    


Q ss_pred             ---ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        386 ---LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       386 ---~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                         .+..|..++.......+|..+|+.+.|.+.+..|
T Consensus       353 ~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G  389 (460)
T PRK11462        353 CNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG  389 (460)
T ss_pred             hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence               3444555677778888999999999988887643

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.83  E-value=3.2e-19  Score=167.28  Aligned_cols=350  Identities=17%  Similarity=0.135  Sum_probs=254.2

Q ss_pred             ccHHHHHHHHHHhhhhhhHhhHhhhhhcCccee-eehhhHHHHHHHHHhhcccc--hhhHHHHhhccccccccccchhHH
Q psy15069         23 GVTSWIASILVGVTLCSGPISSAFVNKYGCRNV-TICGAILGSACLAVSVFAKN--VITLCITIGFGTGLGFGLIYLPAI   99 (461)
Q Consensus        23 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~-~~~g~~~~~~~~~l~~~~~~--~~~l~i~~~~l~G~g~~~~~~~~~   99 (461)
                      +..+...++..+...+.+|+-|.++|+.|+||- +....++..++.++..++++  .+.+.+.+-++..++.....+.-.
T Consensus        58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd  137 (438)
T COG2270          58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD  137 (438)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence            457788888888889999999999999997665 55556666666667777765  666655555777888887777788


Q ss_pred             HHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH------------------HhhchhHHHHHHHHHHHHHHHHHh
Q psy15069        100 VSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV------------------REYGWKITLLVLSVTVLSAVLFGI  160 (461)
Q Consensus       100 ~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~------------------~~~gw~~~f~i~~~~~l~~~i~~~  160 (461)
                      +.+.+..+ ++.++..++......+|.++.-.+.-...                  +...-|.++.+.++-.++..+-.+
T Consensus       138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~  217 (438)
T COG2270         138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI  217 (438)
T ss_pred             hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence            88888874 66788888877777777666544432221                  112456667766666665555444


Q ss_pred             hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069        161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (461)
                      +..++.+...+ ..       .           ..+.                                    +      
T Consensus       218 ~~v~~~~~~~~-~~-------~-----------~~l~------------------------------------~------  236 (438)
T COG2270         218 LNVHDAEKISS-PP-------P-----------TALR------------------------------------N------  236 (438)
T ss_pred             hcccccccccc-cc-------h-----------HHHH------------------------------------H------
Confidence            44333221000 00       0           0000                                    0      


Q ss_pred             ccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069        241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVI  319 (461)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~  319 (461)
                          .-++.+.+++     +..+++.+...+++.++..-+..........|. .++|++..+..+.....++..++|.++
T Consensus       237 ----g~k~L~~t~k-----~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii  307 (438)
T COG2270         237 ----GFKELKSTFK-----EIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAII  307 (438)
T ss_pred             ----HHHHHHHHHH-----HHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHH
Confidence                0011122233     344556777888899988888888999999998 599999999999999999999999999


Q ss_pred             hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069        320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF  399 (461)
Q Consensus       320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  399 (461)
                      .|++.||++.|+..+.  ++++..+..+...+......+++...+.|++.|..++..-++..+++|+++.++.+|++++.
T Consensus       308 ~g~Ld~rfg~k~vl~~--~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyalt  385 (438)
T COG2270         308 AGFLDERFGSKPVLMI--GLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALT  385 (438)
T ss_pred             HHHHHHHhCCceeehH--HHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhh
Confidence            9999999887765543  34444433333334455556677788999999999999999999999999999999999999


Q ss_pred             HHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       400 ~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      +...+.+||.+.+.+.+.+|+-+..+....++.+++.+.....+.
T Consensus       386 gra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~  430 (438)
T COG2270         386 GRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKV  430 (438)
T ss_pred             hhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecC
Confidence            999999999999999999999999888888888888776655443

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.79  E-value=2.3e-18  Score=166.64  Aligned_cols=330  Identities=18%  Similarity=0.211  Sum_probs=241.6

Q ss_pred             HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh----cCc-ceeeehhhHHHHHHHHHhhcccc------hhhHHHH
Q psy15069         14 FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK----YGC-RNVTICGAILGSACLAVSVFAKN------VITLCIT   82 (461)
Q Consensus        14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~G~-r~~~~~g~~~~~~~~~l~~~~~~------~~~l~i~   82 (461)
                      +.+.+|++...+|.++.+.-+.-++.-|+.|.+.||    +|| |+.++.|.+-.++.+.++-.+++      ....+++
T Consensus        39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vt  118 (467)
T COG2211          39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVT  118 (467)
T ss_pred             HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHH
Confidence            455589999999999999999999999999999995    665 66688898999999988877763      3333444


Q ss_pred             hhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHH-------hhchhHHHHHHHHHHH
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-------EYGWKITLLVLSVTVL  153 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-------~~gw~~~f~i~~~~~l  153 (461)
                      + ++.+++...+..|-.++..+..  |+||.+..++-+.+.++|.++...+...+..       ..||+.+..+++++..
T Consensus       119 Y-~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~  197 (467)
T COG2211         119 Y-MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV  197 (467)
T ss_pred             H-HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence            4 7788888888888878777776  6899999999999988887766555555543       3489999999998888


Q ss_pred             HHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCC
Q psy15069        154 SAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPES  233 (461)
Q Consensus       154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (461)
                      +..+.+++-.+++..+.  ++.                                                         +
T Consensus       198 i~~l~~~~~v~ER~~~~--~~~---------------------------------------------------------~  218 (467)
T COG2211         198 ILLLFCFFNVKERVVET--QPT---------------------------------------------------------K  218 (467)
T ss_pred             HHHHHHHHHhhcccCcc--ccC---------------------------------------------------------c
Confidence            87776666433322111  000                                                         0


Q ss_pred             CCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhh
Q psy15069        234 ESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAA  312 (461)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~  312 (461)
                      ++.         +.+.+....     ..++||++..+++..++...+..........|. -..|.+..+..........+
T Consensus       219 ~~~---------~~~~~~~~~-----~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~  284 (467)
T COG2211         219 TGV---------KLKLKDSFL-----LIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAG  284 (467)
T ss_pred             ccc---------cccHHHHHH-----HHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHH
Confidence            000         011111121     257899998888888887777766666666666 34577777777777788888


Q ss_pred             hhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc------
Q psy15069        313 NMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSVILVDLL------  384 (461)
Q Consensus       313 ~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~------  384 (461)
                      .+++.++..++.+|+|+++.+..  +.++..++.....+.  ++.+..++..++.+++.+...++.++++.|..      
T Consensus       285 ~l~~~~~~p~L~~~~gkk~~~~~--~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~  362 (467)
T COG2211         285 LLIGLILWPRLVKKFGKKKLFLI--GLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWK  362 (467)
T ss_pred             HHHHHHhHHHHHHHhchHHHHHH--HHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHH
Confidence            88889999999999776665543  444444444444343  35667777778999999999999999988764      


Q ss_pred             -CccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        385 -GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       385 -~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                       +.+.-|..++.+.++.-+|.+++..+.|++.+..|
T Consensus       363 TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G  398 (467)
T COG2211         363 TGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG  398 (467)
T ss_pred             hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence             45567888999999999999999999998887654

>KOG2563|consensus

Probab=99.74  E-value=8.1e-18  Score=158.58  Aligned_cols=371  Identities=15%  Similarity=0.145  Sum_probs=251.3

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccc-----hhh--
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKN-----VIT--   78 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~-----~~~--   78 (461)
                      .|+....+....+| +....-|..-++.+.+...++.+-++.||+|.|...+++.++.+++.++-..+..     ...  
T Consensus        63 ~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~  141 (480)
T KOG2563|consen   63 QYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRP  141 (480)
T ss_pred             eehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhh
Confidence            34555555566678 7777788888899999999999999999999999999999999999988655532     222  


Q ss_pred             HHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhh------chhH--HHHHHH
Q psy15069         79 LCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY------GWKI--TLLVLS  149 (461)
Q Consensus        79 l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~------gw~~--~f~i~~  149 (461)
                      ++..-..+.+.+...+......+...|| |++|..|..+..++..+|..++..+...++.+-      .|..  .|+..+
T Consensus       142 l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~  221 (480)
T KOG2563|consen  142 LTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVE  221 (480)
T ss_pred             hhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHH
Confidence            2222234555555555555556778899 699999999999999999999888888877643      3544  344445


Q ss_pred             HHHHHHHHHHhhcccC-CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccC
Q psy15069        150 VTVLSAVLFGILLRPL-EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKA  228 (461)
Q Consensus       150 ~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (461)
                      +++.+.+++..+.++. |+.|..                                                 .++.    
T Consensus       222 ~l~~l~l~l~~~~~~~~P~tPps-------------------------------------------------~s~~----  248 (480)
T KOG2563|consen  222 CLAALLLALVLFVFTKKPPTPPS-------------------------------------------------ASQA----  248 (480)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCc-------------------------------------------------hhHh----
Confidence            5544444444444433 222220                                                 0000    


Q ss_pred             CCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHH
Q psy15069        229 TVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISI  308 (461)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~  308 (461)
                            .+.        ..+..+..+     +.++|++|.++++.+......+++..+.+..-+...|++...+|.....
T Consensus       249 ------~~~--------~~~f~~si~-----~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l  309 (480)
T KOG2563|consen  249 ------ALQ--------DASFPKSIK-----SCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGAL  309 (480)
T ss_pred             ------hhh--------cCcHHHHHH-----HHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHH
Confidence                  000        011223333     4689999999999998888888888888776777778888899999999


Q ss_pred             HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH-HHHhhhh---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc
Q psy15069        309 VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA-TVICAFC---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLL  384 (461)
Q Consensus       309 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~  384 (461)
                      ..+++++++.+.|.+.||.+ +-+....+......++ +.+....   ...+.++....++|++.....|+..-+..|..
T Consensus       310 ~iv~Gmlga~~~gii~Dktk-~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~T  388 (480)
T KOG2563|consen  310 MIVAGMLGALASGIIADKTK-KFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETT  388 (480)
T ss_pred             HHHHHHHHHHHHHhhhhhhh-hHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeec
Confidence            99999999999999999942 2222222333333333 2111111   24456667778899998888898887777877


Q ss_pred             CccchhHHHHHHHHHHHhhhhhccceeeeeecccC----CchHHHHHHhHHHHHHHHHHHHHHHhhHhHh
Q psy15069        385 GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL----SYSPAFFLAGGAIFVSGVMLFVIPSLQSYLL  450 (461)
Q Consensus       385 ~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g----~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~  450 (461)
                      -|..-++..|+.+..+++.+.+-.++.+...+..+    .+..-+.+...+.+...+..++.+..+|++.
T Consensus       389 yPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~  458 (480)
T KOG2563|consen  389 YPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRA  458 (480)
T ss_pred             cccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhh
Confidence            66777899999999999999999999888887655    2323333333333444444444444444333

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.72  E-value=3.6e-15  Score=140.65  Aligned_cols=353  Identities=15%  Similarity=0.102  Sum_probs=248.0

Q ss_pred             HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcC-----ccee-eehhhHHHHHHHHHhhcc-----c-------c
Q psy15069         14 FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYG-----CRNV-TICGAILGSACLAVSVFA-----K-------N   75 (461)
Q Consensus        14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----~r~~-~~~g~~~~~~~~~l~~~~-----~-------~   75 (461)
                      |..|++++..-++...++..+... ..+..|...|+.+     ||.- +..|..+.+.+..+..++     .       +
T Consensus         6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~   84 (403)
T PF03209_consen    6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP   84 (403)
T ss_pred             HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence            678899999999999999998886 6999999999999     6655 555666666555444332     2       2


Q ss_pred             hh--hHHHH-hhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHH
Q psy15069         76 VI--TLCIT-IGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVT  151 (461)
Q Consensus        76 ~~--~l~i~-~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~  151 (461)
                      .|  ....+ .-.+.|+|.+..-++..+++.|.. ||+|+++.++..+..-+|.+++..+.+.+.+.|.-.-...+....
T Consensus        85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~  164 (403)
T PF03209_consen   85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV  164 (403)
T ss_pred             cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence            22  11111 125789999988888889999988 689999999999999999999999999999887654444444444


Q ss_pred             HHHHHHHHhh--cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCC
Q psy15069        152 VLSAVLFGIL--LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKAT  229 (461)
Q Consensus       152 ~l~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (461)
                      .++..++..+  +..+++.++..+.                                                       
T Consensus       165 a~i~~~l~~ia~wg~E~r~~~~~~~-------------------------------------------------------  189 (403)
T PF03209_consen  165 ALIALLLNLIALWGQEPRRSRRAAA-------------------------------------------------------  189 (403)
T ss_pred             HHHHHHHHHHHHHhcccCCcccccC-------------------------------------------------------
Confidence            4433333322  2222211110000                                                       


Q ss_pred             CCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHH
Q psy15069        230 VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISI  308 (461)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~  308 (461)
                         .+++         ..+.+..+.     ++..+|+...+.+..++...++..-...+-+|- +.+|++..+...+...
T Consensus       190 ---~~~~---------~~~f~~a~~-----~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~  252 (403)
T PF03209_consen  190 ---AERP---------RPPFREAWR-----QVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAF  252 (403)
T ss_pred             ---CCCC---------CccHHHHHH-----HHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHH
Confidence               0000         011223333     234666666666666666667666667777787 7889999999999999


Q ss_pred             HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHH---hhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC
Q psy15069        309 VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVI---CAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG  385 (461)
Q Consensus       309 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~  385 (461)
                      ...+.++|-.+.|++..|. .+++.....++....+++.+   .....+.+.+....+++|++.|......-+...++.+
T Consensus       253 ~~~G~L~G~~~~g~~l~~~-~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~  331 (403)
T PF03209_consen  253 WGGGTLLGMLLAGFLLSRR-LGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTS  331 (403)
T ss_pred             HHHHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCC
Confidence            9999999999999998852 22322333444444444333   3345578888899999999999998888899999999


Q ss_pred             ccchhHHHHHHHHHHHhhhhhccceeeeeeccc----C-----CchHHHHHHhHHHHHHHHHHH
Q psy15069        386 LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST----L-----SYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       386 ~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~----g-----~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      +++.|..+|.....+.++..+|..++|.+.|..    +     .|..+|.+-+++.+++..+..
T Consensus       332 ~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~  395 (403)
T PF03209_consen  332 AGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG  395 (403)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998742    2     266677776666666655443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.70  E-value=1.2e-14  Score=139.81  Aligned_cols=404  Identities=14%  Similarity=0.061  Sum_probs=247.8

Q ss_pred             eehHHHHhHhc----CCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-CcceeeehhhHHHHHHHHHhhccc--chhhHHH
Q psy15069          9 ILFIEFTKVFQ----EGDGVTSWIASILVGVTLCSGPISSAFVNKY-GCRNVTICGAILGSACLAVSVFAK--NVITLCI   81 (461)
Q Consensus         9 ~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~g~~~~~~~~~l~~~~~--~~~~l~i   81 (461)
                      ++.-++..+++    .++++..-+++.|.........++|+++||+ |+|+.+.+|.++..+|.++.+.++  +...+++
T Consensus        43 iL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i  122 (498)
T COG3104          43 ILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYI  122 (498)
T ss_pred             HHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHH
Confidence            34555666666    9999999999999887778999999999995 899999999999999999999884  6778887


Q ss_pred             HhhccccccccccchhHHHHHHhhhh---ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q psy15069         82 TIGFGTGLGFGLIYLPAIVSVTCYFE---RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLF  158 (461)
Q Consensus        82 ~~~~l~G~g~~~~~~~~~~~~~~~f~---~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~  158 (461)
                      .. ++.++|.|..-+...+++.+.+|   .+|....++.+++.++|+++.|.+.+++.+++||...|-+.++-+....+.
T Consensus       123 ~L-~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~  201 (498)
T COG3104         123 GL-ALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVI  201 (498)
T ss_pred             HH-HHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence            64 67779999999999999999873   357889999999999999999999999999999999999888877776665


Q ss_pred             HhhcccC-CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcc-c----cccc---cCC
Q psy15069        159 GILLRPL-EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQ-A----QIDS---KAT  229 (461)
Q Consensus       159 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~---~~~  229 (461)
                      .++.++. ...+..++.+. ...+... .+....=.........         ...+.+..... .    ....   .+.
T Consensus       202 f~~~~r~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~---------~~l~~~~~~~~~~~~~i~~~~~~~~~~  270 (498)
T COG3104         202 FLLGRRHVKGIGGVPDPNP-LSFNFLL-PVLGGLVVMILAALLT---------LLLNQNTFSGVLLVISILIAIIYFAEA  270 (498)
T ss_pred             HHHccchhcCCCCCCCccc-hhhhhhh-hhHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5554321 11111000000 0000000 0000000000000000         00000000000 0    0000   000


Q ss_pred             CCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhcc----ccchhhHhhHH-HH-hCCCchhhH
Q psy15069        230 VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGF----NVPYVYIVKLA-EQ-RGVTRSNAS  303 (461)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~-~g~s~~~~~  303 (461)
                      -+ +++          ..+.|++           -..+..+++...+....+    ..+..+..... .+ +|++ -..+
T Consensus       271 ~~-~~~----------~~~er~r-----------~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~  327 (498)
T COG3104         271 FR-SPK----------VFDERRR-----------LLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPA  327 (498)
T ss_pred             hc-cCc----------cHHHHHH-----------HHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccccee-cCHH
Confidence            00 000          0000111           111222333333222222    22222222222 22 2322 2345


Q ss_pred             HHHHHHhhhhhhhhhhhhhccCCCCcch-----hHHHHHHHHHHHHHHHHhhhh----------hhHHHHHHHHHHHhhh
Q psy15069        304 SLISIVGAANMVSRVILGYISDRPCVNR-----LYIYNGCLAICGAATVICAFC----------YNYVELAIYAGVFGAM  368 (461)
Q Consensus       304 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~-----~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~g~~  368 (461)
                      +..+...+.-++.+++..++..|.++++     ..=+.+++.+++.+++++...          .+.++++...++.+++
T Consensus       328 ~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~g  407 (498)
T COG3104         328 WFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFG  407 (498)
T ss_pred             HHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence            6677777777777777766666533221     122345555556555544433          2578888888999999


Q ss_pred             hhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee------eecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        369 IGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF------LYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~------l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      .=+..|...++++++.|+.-.+..++........|..++..+++.      .++.. .+...|+.++.+.++..+..+..
T Consensus       408 EL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~~~~~  486 (498)
T COG3104         408 ELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGILLLLL  486 (498)
T ss_pred             HHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999888888888888877774      22332 46778888888887777665555


Q ss_pred             HHhhHh
Q psy15069        443 PSLQSY  448 (461)
Q Consensus       443 ~~~~~~  448 (461)
                      .+..+|
T Consensus       487 ~~~~~r  492 (498)
T COG3104         487 SPKLNR  492 (498)
T ss_pred             hHHHHH
Confidence            444333

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.67  E-value=5.7e-18  Score=170.67  Aligned_cols=360  Identities=16%  Similarity=0.187  Sum_probs=3.0

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc--------------
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK--------------   74 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~--------------   74 (461)
                      .....+.++|+++.+++|++.+.+-++..+..++..++.+|.+|-+++.+|.++.+++.+++++.+              
T Consensus        24 ~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~  103 (539)
T PF03137_consen   24 SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNS  103 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccc
Confidence            557789999999999999999999999999999999999999999999999999999998876521              


Q ss_pred             ------------------------------------chhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhh
Q psy15069         75 ------------------------------------NVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIA  117 (461)
Q Consensus        75 ------------------------------------~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~  117 (461)
                                                          -++.++++ .++.|+|....++.+.++++|.. +|+-+...|+.
T Consensus       104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g-q~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~  182 (539)
T PF03137_consen  104 NGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILG-QLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL  182 (539)
T ss_dssp             -------------------------------------------------SSS----------------------------
T ss_pred             ccccccccccccccccccccCccccccccccccchHHHHHHHHH-HHHHhccccCCccceeeeeccccccccCccchhhh
Confidence                                                02333443 68999999999999999999999 57788899999


Q ss_pred             ccchhhhHHHHhHHHHHHHHhh---------------------c-hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCccc
Q psy15069        118 VCGSGLGTIIFAPIIDYTVREY---------------------G-WKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVE  175 (461)
Q Consensus       118 ~~~~~lg~~i~~~l~~~l~~~~---------------------g-w~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~  175 (461)
                      ++...+|+++|-.+++.+.+.|                     | |...|++.|++.++..+..+.+.+..|..++ .++
T Consensus       183 ~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~-~~~  261 (539)
T PF03137_consen  183 YAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSE-RQE  261 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccc-ccc
Confidence            9999999999988888776421                     2 6667777777777665554444221111110 000


Q ss_pred             CCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhh
Q psy15069        176 DGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLRE  255 (461)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (461)
                      +++.++.                .                     .++   .+... .+++++       .+..+...++
T Consensus       262 ~~~~~~~----------------~---------------------~~~---~~~~~-~~~~~~-------~~~~~~~~~d  293 (539)
T PF03137_consen  262 EKESSER----------------K---------------------EED---SDKDS-FKDPKS-------KKSFGKSIKD  293 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhhhhhc----------------c---------------------hhh---hhhhc-cccccc-------ccchhhhhhh
Confidence            0000000                0                     000   00000 000000       0000011111


Q ss_pred             h--hccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcch
Q psy15069        256 M--LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGA-ANMVSRVILGYISDRPCVNR  331 (461)
Q Consensus       256 ~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~~  331 (461)
                      .  .-+++++||.|....++..+......++.+++|.|+ .++++++++++++.....+ +.++|.+++|++..|++.+.
T Consensus       294 f~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~  373 (539)
T PF03137_consen  294 FPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSA  373 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcH
Confidence            1  114689999999999999999999999999999999 7899999999998876555 57789999999999975544


Q ss_pred             hHHHHHHHHHHHHHHHH-----hhhhh---------hH----------------------------------------HH
Q psy15069        332 LYIYNGCLAICGAATVI-----CAFCY---------NY----------------------------------------VE  357 (461)
Q Consensus       332 ~~~~~~~~~~~~~~~~~-----~~~~~---------~~----------------------------------------~~  357 (461)
                      +-....+++...+..+.     +..++         .+                                        ..
T Consensus       374 ~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~  453 (539)
T PF03137_consen  374 RGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIP  453 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHH
Confidence            43222222221111111     00010         00                                        11


Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH-hhhhhccceeeeeeccc
Q psy15069        358 LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG-IASLVGPPIAGFLYDST  418 (461)
Q Consensus       358 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~gp~i~g~l~~~~  418 (461)
                      +.+..++.-+..+........++.+.+|+++|+.+.|+..++.. +|.+-||++.|.+.|.+
T Consensus       454 Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t  515 (539)
T PF03137_consen  454 FLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST  515 (539)
T ss_dssp             --------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence            11222222233333333444456788999999999999887755 67788999999999964

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.67  E-value=2.1e-16  Score=148.19  Aligned_cols=180  Identities=17%  Similarity=0.206  Sum_probs=162.7

Q ss_pred             ccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069        262 LRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAI  341 (461)
Q Consensus       262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~  341 (461)
                      .|.+.++.+.+++...++..-.+....|.+.++.|+|.+|.|.+.+.+.+++.++..+.|.++||  .+++..+..++++
T Consensus        26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr--~npr~fm~~gLil  103 (448)
T COG2271          26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR--SNPRYFMAFGLIL  103 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc--CCCceeehHHHHH
Confidence            44556777888888888888899999999999999999999999999999999999999999999  5555556688899


Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee--eeeecccC
Q psy15069        342 CGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA--GFLYDSTL  419 (461)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~--g~l~~~~g  419 (461)
                      +++..+++++.++.+.+.++.++-|+++|.-.|.....+++++++++||+..++.|++.++|+.+.|++.  +++.++. 
T Consensus       104 sai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-  182 (448)
T COG2271         104 SAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-  182 (448)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999  8888875 


Q ss_pred             CchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        420 SYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       420 ~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      +|+..|++.+++.++.++..+.+-+
T Consensus       183 ~w~~~f~~pgiiaiival~~~~~~r  207 (448)
T COG2271         183 GWRAAFYFPGIIAIIVALILLFLLR  207 (448)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhC
Confidence            6999999999998888777666533

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.66  E-value=1.7e-15  Score=143.97  Aligned_cols=175  Identities=16%  Similarity=0.251  Sum_probs=159.2

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~  344 (461)
                      ...+.+.++.|......+.....+|++.+|+++|..++|++.+.+.++..++.++...+.||+.  ||.++...+.++.+
T Consensus        13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~--Rr~lLl~~l~lFi~   90 (394)
T COG2814          13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLE--RRRLLLGLLALFIV   90 (394)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--hHHHHHHHHHHHHH
Confidence            3567788889999999999999999999999999999999999999999999999999999954  44445566777788


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069        345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA  424 (461)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~  424 (461)
                      +.++..+++|++.+.+.+++.|+..|..++....+..++.|+++|+++.++.+....++..+|.+++.++-|..| ||..
T Consensus        91 ~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-WR~~  169 (394)
T COG2814          91 SNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-WRAT  169 (394)
T ss_pred             HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-HHHH
Confidence            888899999999999999999999999999999999999999999999999999999999999999999999986 9999


Q ss_pred             HHHHhHHHHHHHHHHHHH
Q psy15069        425 FFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       425 f~~~~~~~l~~~~~~~~~  442 (461)
                      |+..+.+.+++.+..+..
T Consensus       170 F~~ia~l~ll~~~~~~~~  187 (394)
T COG2814         170 FLAIAVLALLALLLLWKL  187 (394)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999988877665543

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.65  E-value=4e-15  Score=154.68  Aligned_cols=164  Identities=15%  Similarity=0.139  Sum_probs=133.7

Q ss_pred             ccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069        282 NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIY  361 (461)
Q Consensus       282 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (461)
                      ..+...+|.+.+++|++..+.+++.+...++.+++.+++|+++||+|+|+.++  .++++.+++.++..++++++.+++.
T Consensus       184 ~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~li--i~lil~~i~~ll~afa~s~~~llv~  261 (742)
T TIGR01299       184 FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLL--ICLSVNGFFAFFSSFVQGYGFFLFC  261 (742)
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            44556777777899999999999999999999999999999999987665544  4555566666667778889999999


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc------------CCchHHHHHHh
Q psy15069        362 AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST------------LSYSPAFFLAG  429 (461)
Q Consensus       362 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~------------g~~~~~f~~~~  429 (461)
                      +++.|++.+...+....++.|.+|+++|++.+++.+++..+|.++++.++..+....            .+|++.+++.+
T Consensus       262 R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~  341 (742)
T TIGR01299       262 RLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCA  341 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999987665444321            25899988888


Q ss_pred             HHHHHHHHHHHHHHHhhH
Q psy15069        430 GAIFVSGVMLFVIPSLQS  447 (461)
Q Consensus       430 ~~~l~~~~~~~~~~~~~~  447 (461)
                      +..++..++.+++|+..+
T Consensus       342 lp~ll~ll~~~~lPESPr  359 (742)
T TIGR01299       342 FPCVFAIGALTFMPESPR  359 (742)
T ss_pred             HHHHHHHHHHHHcCCCHH
Confidence            777777666666655433

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>KOG1330|consensus

Probab=99.65  E-value=2.3e-16  Score=149.29  Aligned_cols=183  Identities=14%  Similarity=0.215  Sum_probs=165.2

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG  343 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~  343 (461)
                      +....++++...+.+...|.+-..++..-+.++++.+..|++.+.+.+..+++++++|+++||  .+|+.++.++..+..
T Consensus        32 ~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr--yNR~~v~~vG~~iW~  109 (493)
T KOG1330|consen   32 TLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR--YNRKRVIAVGIFIWT  109 (493)
T ss_pred             hHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh--cCcceEEeeHHHHHH
Confidence            345566788888888888888887777778899999999999999999999999999999999  667777778899999


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchH
Q psy15069        344 AATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSP  423 (461)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~  423 (461)
                      ++.+...++..+|.+.+++.+.|+|.+...|+.+++++|.+|.++|++++++.++...+|+.+|-..++.+.+.+++|++
T Consensus       110 ~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~  189 (493)
T KOG1330|consen  110 LAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW  189 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999989999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069        424 AFFLAGGAIFVSGVMLFVIPSLQSY  448 (461)
Q Consensus       424 ~f~~~~~~~l~~~~~~~~~~~~~~~  448 (461)
                      .|...+++.++..++.++..+.++|
T Consensus       190 af~~~avl~vi~~~L~~~f~~eP~r  214 (493)
T KOG1330|consen  190 AFRGSAVLGVIVGLLVFLFVREPER  214 (493)
T ss_pred             EEEeehHHHHHHHHHHHhhccCccc
Confidence            9999999999888877666554444

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.64  E-value=2.8e-15  Score=149.58  Aligned_cols=173  Identities=14%  Similarity=0.146  Sum_probs=146.6

Q ss_pred             cchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069        263 RDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  342 (461)
                      |.+.++..++.+++.++..+.+..++|.+.+++|++..+.+++.+...++..+++++.|++.||+|+|+.  +..+.++.
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~--~~~~~~~~   98 (434)
T PRK11663         21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYF--MGIGLIAT   98 (434)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchh--HHHHHHHH
Confidence            3344555667777777777778889999999999999999999999999999999999999999765543  44666777


Q ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069        343 GAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS  422 (461)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~  422 (461)
                      +++.++..+.++++.+.+..++.|++.+...+....++.+++|+++|++++|+.+...++|..++|.+.+++.+..| |+
T Consensus        99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~  177 (434)
T PRK11663         99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WR  177 (434)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HH
Confidence            77777777888888888888899999988888888999999999999999999999999999999999999998875 99


Q ss_pred             HHHHHHhHHHHHHHHH
Q psy15069        423 PAFFLAGGAIFVSGVM  438 (461)
Q Consensus       423 ~~f~~~~~~~l~~~~~  438 (461)
                      +.|++.+++.++..+.
T Consensus       178 ~~f~~~~i~~~~~~~~  193 (434)
T PRK11663        178 YGMMIAGIIAIVVGLF  193 (434)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999888776655443

>KOG3626|consensus

Probab=99.63  E-value=1.6e-14  Score=145.85  Aligned_cols=269  Identities=16%  Similarity=0.151  Sum_probs=197.5

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc---------------
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK---------------   74 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~---------------   74 (461)
                      .+..+-+.|+++..+.|++.+.+-++..+...+..+..-|.+|-+++-+|+++.+++.+++++.+               
T Consensus       119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~  198 (735)
T KOG3626|consen  119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ  198 (735)
T ss_pred             hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence            35567788999999999999999999999999999999999999999999999999999987740               


Q ss_pred             ----------------------------------c--hhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhh
Q psy15069         75 ----------------------------------N--VITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIA  117 (461)
Q Consensus        75 ----------------------------------~--~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~  117 (461)
                                                        +  +|.+++.--++.|+|....++.+.+++++.. +|+-....|+.
T Consensus       199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~  278 (735)
T KOG3626|consen  199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGIL  278 (735)
T ss_pred             cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHH
Confidence                                              0  2323332357999999999999999999999 46778889999


Q ss_pred             ccchhhhHHHHhHHHHHHHHhh-------------------chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCC
Q psy15069        118 VCGSGLGTIIFAPIIDYTVREY-------------------GWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGA  178 (461)
Q Consensus       118 ~~~~~lg~~i~~~l~~~l~~~~-------------------gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~  178 (461)
                      .+...+|+++|-.+++++.+.|                   -|..-|++.|.+.++..+..+++....+.+.  ++++. 
T Consensus       279 ~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~--~~~~~-  355 (735)
T KOG3626|consen  279 YSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQ--KRKRA-  355 (735)
T ss_pred             HHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcccc--ccchh-
Confidence            9999999999999999887632                   2777788888888877766555522221111  10000 


Q ss_pred             CCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhh--
Q psy15069        179 LPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREM--  256 (461)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  256 (461)
                                  .+. +..++                                ++++..+       ..+..+.+++.  
T Consensus       356 ------------~~~-~~~k~--------------------------------~~~~~~~-------~~~~~~~ikdfp~  383 (735)
T KOG3626|consen  356 ------------RDL-HVLKT--------------------------------ESGGAKS-------DKTFGKKIKDFPK  383 (735)
T ss_pred             ------------hhh-ccccc--------------------------------ccccccC-------CcchhhhHHHHHH
Confidence                        000 00000                                0000000       00111112221  


Q ss_pred             hccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhh-hhhhhhhhhhccCCCCcchhH
Q psy15069        257 LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAA-NMVSRVILGYISDRPCVNRLY  333 (461)
Q Consensus       257 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~-~~~g~~~~g~l~dr~~~~~~~  333 (461)
                      .-+++++||.|....++..+....+.++.+|+|-|+ +++|.+++.+..+.....+. ..+|.+++|++..|+..+.+-
T Consensus       384 s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~  462 (735)
T KOG3626|consen  384 SIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARG  462 (735)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHH
Confidence            124689999999999999999999999999999999 78999999999988766654 567889999999997655543

>PRK10054 putative transporter; Provisional

Probab=99.63  E-value=4.7e-15  Score=146.04  Aligned_cols=172  Identities=15%  Similarity=0.188  Sum_probs=143.7

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG  343 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~  343 (461)
                      +.++.+.+..++...+.+...+++|.++ +++|++..+.+++.+...++.++++++.|+++||+++|+...  .+.+..+
T Consensus         7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~--~~~~~~~   84 (395)
T PRK10054          7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYML--LAITAFA   84 (395)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH--HHHHHHH
Confidence            3477788888888999999999999998 678999999999999999999999999999999987655433  4555556


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchH
Q psy15069        344 AATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSP  423 (461)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~  423 (461)
                      +..+.+.+.++.+.+++..++.|.+.+...+....+..|.+|+++|+++.|+.+...++|.++||.+++.+.+ . +|+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~  162 (395)
T PRK10054         85 SGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINL  162 (395)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCc
Confidence            6666677788887777777777777777778888889999999999999999999999999999999999886 3 4999


Q ss_pred             HHHHHhHHHHHHHHHHH
Q psy15069        424 AFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       424 ~f~~~~~~~l~~~~~~~  440 (461)
                      .|++.+++.++..+...
T Consensus       163 ~f~~~~~~~~i~~i~~~  179 (395)
T PRK10054        163 PFWLAAICSAFPLVFIQ  179 (395)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99988887777655443

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.60  E-value=1.3e-14  Score=142.41  Aligned_cols=172  Identities=18%  Similarity=0.244  Sum_probs=148.7

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~  344 (461)
                      +.++.+.+..+............+|.+.+++|.+..+.+++.+...++..+++++.|++.||+|+|+.  +..+..+.++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--~~~~~~~~~~   80 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHI--LLFLVALCVI   80 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHH--HHHHHHHHHH
Confidence            45667777888888887888889999999999999999999999999999999999999999765544  4456667777


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069        345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA  424 (461)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~  424 (461)
                      ..++..+.++++.+++.+++.|++.+...+....++.+++|+++|+++.++......++..+||.+++++.+..+ |++.
T Consensus        81 ~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~  159 (382)
T PRK10091         81 GNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYT  159 (382)
T ss_pred             HHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHH
Confidence            777888889999999999999999998888888889999999899999999999999999999999999998764 9999


Q ss_pred             HHHHhHHHHHHHHHH
Q psy15069        425 FFLAGGAIFVSGVML  439 (461)
Q Consensus       425 f~~~~~~~l~~~~~~  439 (461)
                      |++.+++.++..+..
T Consensus       160 f~~~~~~~~~~~~~~  174 (382)
T PRK10091        160 FLLIAVFNIAVLASI  174 (382)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999888766665543

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.60  E-value=5.3e-15  Score=143.77  Aligned_cols=172  Identities=19%  Similarity=0.223  Sum_probs=142.7

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV  347 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  347 (461)
                      +.+....++...+.......+|.|..+.+.+..+.+++.+...++.+++.++.|+++||+|+|+...  .+.++.+++.+
T Consensus         2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~--~~~~~~~~~~~   79 (365)
T TIGR00900         2 RLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMI--GADLIRAVLVA   79 (365)
T ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHH--HHHHHHHHHHH
Confidence            3456667777777777888889999889999999999999999999999999999999977655443  44444444444


Q ss_pred             Hhhhhh-----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069        348 ICAFCY-----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS  422 (461)
Q Consensus       348 ~~~~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~  422 (461)
                      +..+.+     +.+.+++..++.|++.+...+...+++.|++|+++|+++.++.+....+|..+||.+++.+.+..| |+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~  158 (365)
T TIGR00900        80 VLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IK  158 (365)
T ss_pred             HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HH
Confidence            445555     888888999999999999999999999999999999999999999999999999999999998864 99


Q ss_pred             HHHHHHhHHHHHHHHHHHHH
Q psy15069        423 PAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       423 ~~f~~~~~~~l~~~~~~~~~  442 (461)
                      ..|++.++..++..+..+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~  178 (365)
T TIGR00900       159 WAIWVDAVGFAISALLIVSV  178 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHhc
Confidence            99988877766665554444

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.59  E-value=1.3e-14  Score=143.35  Aligned_cols=177  Identities=19%  Similarity=0.249  Sum_probs=146.8

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~  344 (461)
                      +.+....+..+...+..+......|.+.+++|.+..+.+++.+...++..++.++.|+++||+|+|+.++  .+.++.++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~--~~~~~~~~   89 (405)
T TIGR00891        12 NAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMV--TSIVLFSA   89 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH--HHHHHHHH
Confidence            3455677777777888888888888888999999999999999999999999999999999977655443  45566666


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC-CchH
Q psy15069        345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL-SYSP  423 (461)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g-~~~~  423 (461)
                      +.++..+.++++.+++..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ +|+.
T Consensus        90 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~  169 (405)
T TIGR00891        90 GTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRA  169 (405)
T ss_pred             HHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence            666777788999999999999999999999999999999999999999999999999999999999999887654 4999


Q ss_pred             HHHHHhHHHHHHHHHHHHHH
Q psy15069        424 AFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       424 ~f~~~~~~~l~~~~~~~~~~  443 (461)
                      .|++.++..++..+.....+
T Consensus       170 ~f~~~~~~~~~~~~~~~~~~  189 (405)
T TIGR00891       170 LFFISILPIIFALWLRKNIP  189 (405)
T ss_pred             HHHHHHHHHHHHHHHHHhCC
Confidence            99876655555444333333

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.59  E-value=4.9e-15  Score=149.02  Aligned_cols=179  Identities=13%  Similarity=0.128  Sum_probs=147.5

Q ss_pred             ccch-hHHHHHHHHHHHhhccccchhhHhhHHH-H--hCCCchhhHHHHHHHhhhhhhhhhhhhhccCC-CCcchhHHHH
Q psy15069        262 LRDP-IFILFTISNIFTSIGFNVPYVYIVKLAE-Q--RGVTRSNASSLISIVGAANMVSRVILGYISDR-PCVNRLYIYN  336 (461)
Q Consensus       262 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~  336 (461)
                      +++| .++.+.+..++..++++....++|.|++ +  +|++..+++.+.+.+.++..++++++|+++|| +|+|+..+  
T Consensus         6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~--   83 (475)
T TIGR00924         6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV--   83 (475)
T ss_pred             cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH--
Confidence            4454 4566777788888999999999999995 4  79999999999999999999999999999999 67666544  


Q ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc---hhHHHHHHHHHHHhhhhhccceeee
Q psy15069        337 GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR---LTNAFGLLLLFQGIASLVGPPIAGF  413 (461)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~g~~~gp~i~g~  413 (461)
                      .+.++.+++.+++.+.++.+.+++..++.|++.|...+...+++.+.+|+++   |++++++.+...++|..+||.++|+
T Consensus        84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~  163 (475)
T TIGR00924        84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV  163 (475)
T ss_pred             HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence            5556666666666677777777778888999999888999999999998754   8889999999999999999999999


Q ss_pred             eecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        414 LYDSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       414 l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      +.++.| |+..|.+.++..+++.+..+..+
T Consensus       164 l~~~~g-~~~~f~~~~~~~~~~~l~~~~~~  192 (475)
T TIGR00924       164 IAENYG-YHVGFNLAAVGMVIGLLTFFAGR  192 (475)
T ss_pred             HHHhcC-hHHHHHHHHHHHHHHHHHHHHcc
Confidence            999875 99999998876666554444433

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.59  E-value=2e-14  Score=141.53  Aligned_cols=158  Identities=13%  Similarity=0.182  Sum_probs=134.6

Q ss_pred             HhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHH
Q psy15069        277 TSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYV  356 (461)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (461)
                      .....+.....+|.+.+++|.++.+.++..+...++..+++++.|++.||+|+|+.  +..+.++.++..+...+.++++
T Consensus        32 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~--~~~~~~~~~~~~~~~~~~~~~~  109 (394)
T PRK10213         32 LIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV--VILFAVLLTLSCLLVSFANSFS  109 (394)
T ss_pred             HHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH--HHHHHHHHHHHHHHHHHHChHH
Confidence            33344455567888889999999999999999999999999999999999765544  4456666666767777788999


Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069        357 ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG  436 (461)
Q Consensus       357 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~  436 (461)
                      .+++.+++.|++.+...+....++.|++|+++|+++.++.....++|..+||.+++.+.+..| |++.|++.+++.++..
T Consensus       110 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~~~~~  188 (394)
T PRK10213        110 LLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WRNVFNAAAVMGVLCI  188 (394)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999875 9999998876665544


Q ss_pred             H
Q psy15069        437 V  437 (461)
Q Consensus       437 ~  437 (461)
                      +
T Consensus       189 l  189 (394)
T PRK10213        189 F  189 (394)
T ss_pred             H
Confidence            3

>PRK03545 putative arabinose transporter; Provisional

Probab=99.58  E-value=2.3e-14  Score=141.08  Aligned_cols=171  Identities=14%  Similarity=0.226  Sum_probs=141.4

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT  346 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  346 (461)
                      ++.+.+..++.....+.....+|.+.+++|.++.+.++..+.+.++..+++++.|++.||+|+|+..  ..+..+.+++.
T Consensus        11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~   88 (390)
T PRK03545         11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL--IGLFVLFIASH   88 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HHHHHHHHHHH
Confidence            4455555444434444455567888899999999999999999999999999999999997765543  35566667777


Q ss_pred             HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHH
Q psy15069        347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFF  426 (461)
Q Consensus       347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~  426 (461)
                      +...+.++++.+++.+++.|++.+...+...+++.+.+|+++|+++.|+......+|..+||++++.+.+.. +|++.|+
T Consensus        89 ~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~  167 (390)
T PRK03545         89 VLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFL  167 (390)
T ss_pred             HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHHH
Confidence            777888999999999999999998888988999999999999999999999999999999999999998876 4999999


Q ss_pred             HHhHHHHHHHHHHH
Q psy15069        427 LAGGAIFVSGVMLF  440 (461)
Q Consensus       427 ~~~~~~l~~~~~~~  440 (461)
                      +.+++.++..+..+
T Consensus       168 ~~~~~~~l~~~~~~  181 (390)
T PRK03545        168 AIGGGALITLLLLI  181 (390)
T ss_pred             HHHHHHHHHHHHHH
Confidence            98887776655443

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.58  E-value=1.1e-14  Score=142.87  Aligned_cols=171  Identities=16%  Similarity=0.193  Sum_probs=142.6

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV  347 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  347 (461)
                      +...+..++...+.......+|.+.+++|.+..+.+++.+...++..+++++.|++.||+|+|+...  .+.++.+++.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~--~~~~~~~~~~~   85 (385)
T TIGR00710         8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLL--LGLFIFALSSL   85 (385)
T ss_pred             HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH--HHHHHHHHHHH
Confidence            3344444555566666777888888999999999999999999999999999999999987655443  45566666667


Q ss_pred             HhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069        348 ICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL  427 (461)
Q Consensus       348 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~  427 (461)
                      ...+.++.+.+.+..++.|++.+...+....++.|.+|+++|+++.|+.+....+|..+||.+++.+.+.. +|+..|++
T Consensus        86 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~  164 (385)
T TIGR00710        86 GLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAF  164 (385)
T ss_pred             HHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHH
Confidence            77778888888999999999999999999999999999999999999999999999999999999999876 49999988


Q ss_pred             HhHHHHHHHHHHHH
Q psy15069        428 AGGAIFVSGVMLFV  441 (461)
Q Consensus       428 ~~~~~l~~~~~~~~  441 (461)
                      .+++.++..+..+.
T Consensus       165 ~~~~~~~~~~~~~~  178 (385)
T TIGR00710       165 LSLAGILLSALIFF  178 (385)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88777766655444

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.58  E-value=1.2e-14  Score=143.90  Aligned_cols=173  Identities=14%  Similarity=0.140  Sum_probs=146.5

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~  344 (461)
                      +.++...+.+++.+.....+....|.+.+++|++..+.+++.+.+.++..+++++.|++.||+|+|+.  +..++++.++
T Consensus         8 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~--~~~~~~~~~~   85 (412)
T TIGR02332         8 RLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW--IAGIMVLWGI   85 (412)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH--HHHHHHHHHH
Confidence            34556677777778888888888887779999999999999999999999999999999999765554  4466777777


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc-----cC
Q psy15069        345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS-----TL  419 (461)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~-----~g  419 (461)
                      ..++..+.++++.+++.+++.|++.+...+....++.|++|+++|+++.|+.+....+|..++|.+++++.+.     ..
T Consensus        86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~  165 (412)
T TIGR02332        86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK  165 (412)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            7777788889999999999999999999898888999999999999999999999999999999999988742     12


Q ss_pred             CchHHHHHHhHHHHHHHHHH
Q psy15069        420 SYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       420 ~~~~~f~~~~~~~l~~~~~~  439 (461)
                      +|++.|++.++..++..++.
T Consensus       166 gwr~~f~~~~~~~l~~~~~~  185 (412)
T TIGR02332       166 GWQWLFLLEGFPSVILGVMT  185 (412)
T ss_pred             chhHHHHHHHHHHHHHHHHH
Confidence            59999999887776655443

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.58  E-value=8.9e-15  Score=141.53  Aligned_cols=165  Identities=22%  Similarity=0.314  Sum_probs=138.8

Q ss_pred             HHHHHHHhhccccchhhHh-hHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069        271 TISNIFTSIGFNVPYVYIV-KLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC  349 (461)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  349 (461)
                      ++..++...........+| .+.+++|.+..+.+++.+...++..++.++.|+++||+|+|+  ++..+.++.+++.++.
T Consensus         2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~l~~~~~~~~~~~~~~   79 (352)
T PF07690_consen    2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR--VLIIGLLLFALGSLLL   79 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH--HHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee--eEeehhhhhhhHHHHh
Confidence            4555666677777778888 555889999999999999999999999999999999976555  4445555666653443


Q ss_pred             hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069        350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG  429 (461)
Q Consensus       350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~  429 (461)
                      .++++.+.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+++.+.+..+ |+..|++.+
T Consensus        80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~  158 (352)
T PF07690_consen   80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISA  158 (352)
T ss_dssp             HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHH
T ss_pred             hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-ccccccccc
Confidence            3557777888899999999999999999999999999999999999999999999999999999998764 999999999


Q ss_pred             HHHHHHHHH
Q psy15069        430 GAIFVSGVM  438 (461)
Q Consensus       430 ~~~l~~~~~  438 (461)
                      ++.++..++
T Consensus       159 ~~~~~~~il  167 (352)
T PF07690_consen  159 ILSLIAAIL  167 (352)
T ss_dssp             HHHHHHHHH
T ss_pred             chhhhhhhh
Confidence            998888774

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK10504 putative transporter; Provisional

Probab=99.58  E-value=2e-14  Score=145.17  Aligned_cols=173  Identities=13%  Similarity=0.211  Sum_probs=148.3

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~  344 (461)
                      +.+|.+.++.++.....+.+..++|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|+|+..+  .+.++.++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~--~~~~~~~~   87 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF--TAIVLFTL   87 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH--HHHHHHHH
Confidence            3577888888888888888899999999999999999999999999999999999999999987665544  44555555


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069        345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA  424 (461)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~  424 (461)
                      +.+...+.++.+.+++..++.|++.+...+.....+.|.+|++++++++|+.+...++|..+||.++|.+.|+.| |++.
T Consensus        88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~  166 (471)
T PRK10504         88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWI  166 (471)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHH
Confidence            555666777888888999999999999999999999999999999999999999999999999999999999874 9999


Q ss_pred             HHHHhHHHHHHHHHHH
Q psy15069        425 FFLAGGAIFVSGVMLF  440 (461)
Q Consensus       425 f~~~~~~~l~~~~~~~  440 (461)
                      |++...+..+..++..
T Consensus       167 f~~~~~~~~l~~~~~~  182 (471)
T PRK10504        167 FLINIPVGIIGAIATL  182 (471)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9988777666655544

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.57  E-value=6.5e-15  Score=144.57  Aligned_cols=163  Identities=19%  Similarity=0.241  Sum_probs=138.0

Q ss_pred             HHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhH
Q psy15069        276 FTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNY  355 (461)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (461)
                      +.+.....+....|.+.+++|.+..+.+++.+...++..++.++.|+++||+|+|+...  .+.++.+++..+..+.++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~--~~~~~~~~~~~~~~~~~~~   82 (399)
T TIGR00893         5 INYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLA--VFIVIWGVFTGLQAFAGAY   82 (399)
T ss_pred             HHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeH--HHHHHHHHHHHHHHHHcCH
Confidence            33444455666777777999999999999999999999999999999999987665544  4555666666667777899


Q ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHH
Q psy15069        356 VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVS  435 (461)
Q Consensus       356 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~  435 (461)
                      +.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ |+..|++.+++.++.
T Consensus        83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~  161 (399)
T TIGR00893        83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIW  161 (399)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999988865 999999888877766


Q ss_pred             HHHHHH
Q psy15069        436 GVMLFV  441 (461)
Q Consensus       436 ~~~~~~  441 (461)
                      .+..+.
T Consensus       162 ~~~~~~  167 (399)
T TIGR00893       162 GVLWLK  167 (399)
T ss_pred             HHHhhh
Confidence            655444

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.57  E-value=2.1e-14  Score=142.18  Aligned_cols=388  Identities=11%  Similarity=0.070  Sum_probs=236.9

Q ss_pred             Ccceeee--eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcC-----cceeeehhhHHHHHHHHHhhccc
Q psy15069          2 GVTYSFG--ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYG-----CRNVTICGAILGSACLAVSVFAK   74 (461)
Q Consensus         2 g~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----~r~~~~~g~~~~~~~~~l~~~~~   74 (461)
                      |+.+++.  ...|.+.+++|++++++....++..+... .-|+.|.+.|.+.     ||+-++++.++.+++.+..+..+
T Consensus         2 G~~~~l~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~   80 (433)
T PF03092_consen    2 GFAGGLSRLAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP   80 (433)
T ss_pred             ChhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc
Confidence            4545333  45677888899999999999999998885 5899999999875     56667788888866666554433


Q ss_pred             ----chhhHHHHhhccccccccccchhHHHHHHhhh---hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHH
Q psy15069         75 ----NVITLCITIGFGTGLGFGLIYLPAIVSVTCYF---ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLV  147 (461)
Q Consensus        75 ----~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f---~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i  147 (461)
                          +.....+. -++..+|.+...+.+-+.+.|..   |+.||...+.......+|.+++..+.+.+.+..++|..|.+
T Consensus        81 ~~~~s~~~~~~~-l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i  159 (433)
T PF03092_consen   81 ASESSAAIAVVL-LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLI  159 (433)
T ss_pred             cccchhhhHHHH-HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehH
Confidence                34444443 36677888888888877777765   44577888888888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcccccccc
Q psy15069        148 LSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSK  227 (461)
Q Consensus       148 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (461)
                      .+++.++..+..+++.++++.++.++...  .                                                
T Consensus       160 ~~~~~~l~~~~~~~~~~e~~~~~~~~~~~--~------------------------------------------------  189 (433)
T PF03092_consen  160 SAALPLLMLIVALFLLEERKVRPADEVFS--F------------------------------------------------  189 (433)
T ss_pred             HHHHHHHHHHHHHHhhhhccccccchhhc--c------------------------------------------------
Confidence            98888777666666655321111000000  0                                                


Q ss_pred             CCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHH-HHHHHhhccccchh-hHhhHHHHhC---CCchhh
Q psy15069        228 ATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTI-SNIFTSIGFNVPYV-YIVKLAEQRG---VTRSNA  302 (461)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~g---~s~~~~  302 (461)
                           .++ +.+..+    ...|....+.  ++.++.|.+|...+ ..++.......-.. ..-..-++.+   +++...
T Consensus       190 -----~~~-~~~~~~----~~~~~~~~~l--~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~  257 (433)
T PF03092_consen  190 -----GKE-EVPCLF----GSFREQLSEL--WRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFY  257 (433)
T ss_pred             -----ccc-ccchhh----HHHHHHHHHH--HHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHH
Confidence                 000 000000    0011122111  24566777766544 33333222211111 0000113445   888888


Q ss_pred             HHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHH-hhhhh---------hHHHHHHHHHHHhhhhhhH
Q psy15069        303 SSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVI-CAFCY---------NYVELAIYAGVFGAMIGAY  372 (461)
Q Consensus       303 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~l~g~~~~~~  372 (461)
                      +.+..+..++.++|..+......+...|+.  +..+.++..+..+. ..+..         +.+....-.++..+.....
T Consensus       258 ~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~--~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~  335 (433)
T PF03092_consen  258 GTLSIVGSIASLLGILLYRKYFSNWSWRRI--FVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIA  335 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHH
Confidence            988888888888888887666665444433  22333333222211 11111         1111122233444444444


Q ss_pred             HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC----C---chHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069        373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL----S---YSPAFFLAGGAIFVSGVMLFVIPSL  445 (461)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g----~---~~~~f~~~~~~~l~~~~~~~~~~~~  445 (461)
                      +-....+++++.|+..-|+.+|++..+.++|..++..++..+.+..+    +   -....++..++.++...+..++++.
T Consensus       336 ~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~  415 (433)
T PF03092_consen  336 FMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQ  415 (433)
T ss_pred             HHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            44555678999999999999999999999999999988888776544    1   3345555555565555556566665


Q ss_pred             hHhHhhhhhh
Q psy15069        446 QSYLLKRKEK  455 (461)
Q Consensus       446 ~~~~~~~~~~  455 (461)
                      ++..++.+.+
T Consensus       416 ~~~~~~~~~~  425 (433)
T PF03092_consen  416 KRITDELDAD  425 (433)
T ss_pred             chhhHHHhhc
Confidence            5444433333

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.56  E-value=3.2e-14  Score=144.36  Aligned_cols=173  Identities=16%  Similarity=0.132  Sum_probs=147.5

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  345 (461)
                      .+..++++.++.......+.+.+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|+|+..  ..+.++..++
T Consensus         7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l--~~~~~~~~~~   84 (495)
T PRK14995          7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL--MLGGTLFGLA   84 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--HHHHHHHHHH
Confidence            34557778888888888889999999999999999999999999999999999999999997655544  4566677777


Q ss_pred             HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc-CccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069        346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLL-GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA  424 (461)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~  424 (461)
                      .+.+.+.++.+.+++.+++.|++.+...+.....+.+.+ |+++|+++.|+......+|..+||.++|++.++. +|++.
T Consensus        85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~~  163 (495)
T PRK14995         85 SLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGSV  163 (495)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHHH
Confidence            777888899999999999999999988888777776765 6789999999999999999999999999999987 49999


Q ss_pred             HHHHhHHHHHHHHHHHH
Q psy15069        425 FFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       425 f~~~~~~~l~~~~~~~~  441 (461)
                      |++...+.++..++.+.
T Consensus       164 f~i~~~~~~~~~~l~~~  180 (495)
T PRK14995        164 FLINVPIVLVVMGLTAR  180 (495)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99988776666555433

>PRK03699 putative transporter; Provisional

Probab=99.56  E-value=2.8e-14  Score=140.66  Aligned_cols=173  Identities=14%  Similarity=0.117  Sum_probs=142.6

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  345 (461)
                      .++...+..++.......+...+|.+.+++|+|..+.+++.+...++..+++++.|++.||+|+|+.  +..+.++.++.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~--~~~~~~~~~i~   85 (394)
T PRK03699          8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ--LIFGFALMILA   85 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHHH
Confidence            4555666666666666777788999999999999999999999999999999999999999765554  33555566666


Q ss_pred             HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHH
Q psy15069        346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAF  425 (461)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f  425 (461)
                      .++..+.++++.+++.+++.|++.+...+....++.|.+|+++|+.+.+..+....+++.++|.+.+.+.+...+|+..|
T Consensus        86 ~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f  165 (394)
T PRK03699         86 VAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVY  165 (394)
T ss_pred             HHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence            66677778888888899999999998888888899999999999999999998889999999999998876545699999


Q ss_pred             HHHhHHHHHHHHHHH
Q psy15069        426 FLAGGAIFVSGVMLF  440 (461)
Q Consensus       426 ~~~~~~~l~~~~~~~  440 (461)
                      .+.+++.++..++.+
T Consensus       166 ~~~~~~~~~~~~~~~  180 (394)
T PRK03699        166 ACIGLVYVAIFILTL  180 (394)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            988887766655443

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.56  E-value=6.5e-15  Score=146.31  Aligned_cols=179  Identities=17%  Similarity=0.197  Sum_probs=144.8

Q ss_pred             ccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069        262 LRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAI  341 (461)
Q Consensus       262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~  341 (461)
                      .|+|.++.+.+..++..++.......+|.+.++.+.++.+.+++.+...++.++++++.|+++||+++|+....  +..+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~--~~~~   91 (417)
T PRK10489         14 KTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL--ARGT   91 (417)
T ss_pred             HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe--hHHH
Confidence            46888888888888888888888889999998888999999999999999999999999999999877765443  2222


Q ss_pred             HHHHHHHhh-----hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069        342 CGAATVICA-----FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       342 ~~~~~~~~~-----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~  416 (461)
                      .+++.+...     ..++++.+++..++.|++.+...+.....+.+.+|+++++++.++.+...++|..+||.++|.+.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~  171 (417)
T PRK10489         92 CGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA  171 (417)
T ss_pred             HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence            232222211     245677777888889998888888888889999999999999999999999999999999999998


Q ss_pred             ccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        417 STLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       417 ~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      ..| |++.|++.++..+++.+..+.++
T Consensus       172 ~~~-~~~~~~~~~~~~~~~~~~~~~l~  197 (417)
T PRK10489        172 AGG-VAWNYGLAAAGTFITLLPLLRLP  197 (417)
T ss_pred             HHh-hHHHHHHHHHHHHHHHHHHHhCC
Confidence            764 89999888877776666555444

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.56  E-value=3.5e-14  Score=143.90  Aligned_cols=173  Identities=18%  Similarity=0.256  Sum_probs=147.8

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT  346 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  346 (461)
                      +..++++.++...........+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|+|+..  ..+.++.+++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~   81 (485)
T TIGR00711         4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF--LISTFAFTLGS   81 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH--HHHHHHHHHHH
Confidence            3455666777777777788889999999999999999999999999999999999999997655543  35566667777


Q ss_pred             HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHH
Q psy15069        347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFF  426 (461)
Q Consensus       347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~  426 (461)
                      ++..+.++.+.+++..++.|++.+...+....++.|.+|+++|+++.++......+|..+||.++|++.++. +|++.|+
T Consensus        82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~~f~  160 (485)
T TIGR00711        82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRWIFL  160 (485)
T ss_pred             HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cceehhh
Confidence            777788899999999999999999999999999999999999999999999999999999999999999986 4999999


Q ss_pred             HHhHHHHHHHHHHHHH
Q psy15069        427 LAGGAIFVSGVMLFVI  442 (461)
Q Consensus       427 ~~~~~~l~~~~~~~~~  442 (461)
                      +.+.+.++..++.+..
T Consensus       161 ~~~~~~~~~~~~~~~~  176 (485)
T TIGR00711       161 INVPIGIIVVVVAFFI  176 (485)
T ss_pred             hhhHHHHHHHHHHHHH
Confidence            8887776665554433

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.56  E-value=5.5e-14  Score=140.04  Aligned_cols=163  Identities=12%  Similarity=0.138  Sum_probs=137.7

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~  344 (461)
                      +.+....+.++............+|.+.+++|.+..+.++..+...++..++.++.|+++||+|+|+..  ..+.++.++
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l--~~~~~~~~~   95 (426)
T PRK12307         18 NALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM--MWSIVAYSV   95 (426)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--HHHHHHHHH
Confidence            334555666666666766777777887899999999999999999999999999999999997655544  456666667


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069        345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA  424 (461)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~  424 (461)
                      +.++..+.++.+.+++..++.|++.+...+....++.|.+|+++|+++.++......+|.+++|.+.+.+.+.. +|+..
T Consensus        96 ~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w~~~  174 (426)
T PRK12307         96 GTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GWRAA  174 (426)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CHHHH
Confidence            77777788899999999999999999999999999999999999999999999999999999999988888876 59999


Q ss_pred             HHHHhH
Q psy15069        425 FFLAGG  430 (461)
Q Consensus       425 f~~~~~  430 (461)
                      |++...
T Consensus       175 f~i~~~  180 (426)
T PRK12307        175 FFVGLL  180 (426)
T ss_pred             HHHHHH
Confidence            987543

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.55  E-value=4.6e-14  Score=139.26  Aligned_cols=168  Identities=13%  Similarity=0.134  Sum_probs=143.1

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT  346 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  346 (461)
                      +.+....++...+.+...+++|.++ ++.|++..+.|++.+...+...+.+++.|+++||+++|+.  +..+.++.++..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~--l~~~~~~~~~~~   90 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM--IVTGMLMRAAGF   90 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH--HHHHHHHHHHHH
Confidence            4556777788888888899999887 7889999999999999999999999999999999765444  445666667777


Q ss_pred             HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHH
Q psy15069        347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFF  426 (461)
Q Consensus       347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~  426 (461)
                      +...+.++.+.+++..++.|++.+...+...+++.+.+|+++|+++.|+.+...++|..+||.++|++.+ . +|+..|+
T Consensus        91 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-~-g~~~~f~  168 (400)
T PRK11646         91 ATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-Y-DFRLVCA  168 (400)
T ss_pred             HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-hHHHHHH
Confidence            7777778888888889999999888888888999999999999999999999999999999999999984 4 5999999


Q ss_pred             HHhHHHHHHHHHH
Q psy15069        427 LAGGAIFVSGVML  439 (461)
Q Consensus       427 ~~~~~~l~~~~~~  439 (461)
                      +.+++.++..+..
T Consensus       169 ~~~~~~~~~~i~~  181 (400)
T PRK11646        169 TGAVLFVLAAAFN  181 (400)
T ss_pred             HHHHHHHHHHHHH
Confidence            8887777665443

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.55  E-value=3.8e-14  Score=143.48  Aligned_cols=183  Identities=16%  Similarity=0.177  Sum_probs=141.7

Q ss_pred             hccccccchh-HHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC-CCcchhH
Q psy15069        257 LDMELLRDPI-FILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR-PCVNRLY  333 (461)
Q Consensus       257 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~  333 (461)
                      .+.+.+|+|+ ++..++..++..++++.+..+++.|+ +++|++..+++.+.+.+........+++|+++|| +|+|+..
T Consensus        12 ~~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~   91 (500)
T PRK09584         12 VSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI   91 (500)
T ss_pred             CChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence            3345677774 78888888899999999999999999 8899999998888877666656666789999999 4766554


Q ss_pred             HHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc--hhHHHHHHHHHHHhhhhhccce
Q psy15069        334 IYNGCLAICGAATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR--LTNAFGLLLLFQGIASLVGPPI  410 (461)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~gp~i  410 (461)
                      +  .+.++.+++.+++.+.+ +.+.+++..++.|++.|...+...+++.+.+|+++  +..++++.+...++|..+||.+
T Consensus        92 ~--~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i  169 (500)
T PRK09584         92 M--LGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA  169 (500)
T ss_pred             H--HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence            4  44555555555555543 44455566788899999888888889999998543  4568899999999999999999


Q ss_pred             eeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        411 AGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       411 ~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      .|++.|..| |++.|.+.++..+++.+..+..
T Consensus       170 ~g~l~~~~g-~~~~F~i~~i~~~i~~i~~~~~  200 (500)
T PRK09584        170 TPWLAAKYG-WSVAFALSVVGMLITVVNFAFC  200 (500)
T ss_pred             HHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHh
Confidence            999999875 9999998877666665544443

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.55  E-value=7.4e-14  Score=138.20  Aligned_cols=171  Identities=13%  Similarity=0.161  Sum_probs=141.1

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT  346 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  346 (461)
                      +...+...++.....+......|.+.+++|.++.+.+++.+...++..++.++.|+++||+|+|+...  .+.++.++..
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~~~~   94 (406)
T PRK11551         17 IGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILI--VSVALFGLFS   94 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH--HHHHHHHHHH
Confidence            44455556666666677777888888999999999999999999999999999999999987666554  3444555656


Q ss_pred             HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHH
Q psy15069        347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFF  426 (461)
Q Consensus       347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~  426 (461)
                      +...+.++++.+.+..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+++.+.+.. +|+..|+
T Consensus        95 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~  173 (406)
T PRK11551         95 LATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-AWRHIFY  173 (406)
T ss_pred             HHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-CHHHHHH
Confidence            666677889999999999999999999999999999999999999999999999999999999988888776 4999998


Q ss_pred             HHhHHHHHHHHHHH
Q psy15069        427 LAGGAIFVSGVMLF  440 (461)
Q Consensus       427 ~~~~~~l~~~~~~~  440 (461)
                      +.+++.++..+...
T Consensus       174 ~~~~~~~~~~~~~~  187 (406)
T PRK11551        174 VGGVGPLLLVPLLM  187 (406)
T ss_pred             HHHHHHHHHHHHHH
Confidence            87776555554433

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.54  E-value=4.7e-14  Score=137.69  Aligned_cols=167  Identities=16%  Similarity=0.124  Sum_probs=135.9

Q ss_pred             HHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh
Q psy15069        272 ISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF  351 (461)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~  351 (461)
                      +...+.....+.+....|.+.+++|++..+.+++.+...++..+++++.|+++||+|+|+...  .+.++.+++.+...+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~--~~~~~~~~~~~~~~~   87 (377)
T TIGR00890        10 VIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAM--LGGILYGLGFTFYAI   87 (377)
T ss_pred             HHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhH--HhHHHHHHHHHHHHH
Confidence            333333444566777888888999999999999999999999999999999999987666544  456666777777788


Q ss_pred             hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHH
Q psy15069        352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA  431 (461)
Q Consensus       352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~  431 (461)
                      .++++.+++.+++.|++.+...+.....+.+.+| ++|+++.++......+|..+++++.+.+.+.. +|++.|++.+++
T Consensus        88 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~  165 (377)
T TIGR00890        88 ADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGII  165 (377)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHH
Confidence            8899999999999999999888777778888887 67999999999999999888777777777765 599999998888


Q ss_pred             HHHHHHHHHHH
Q psy15069        432 IFVSGVMLFVI  442 (461)
Q Consensus       432 ~l~~~~~~~~~  442 (461)
                      .++..+..+..
T Consensus       166 ~~~~~~~~~~~  176 (377)
T TIGR00890       166 FLLVIVLGAFL  176 (377)
T ss_pred             HHHHHHHHHHh
Confidence            77766555443

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.53  E-value=9.4e-14  Score=136.82  Aligned_cols=169  Identities=14%  Similarity=0.131  Sum_probs=139.5

Q ss_pred             HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069        270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC  349 (461)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  349 (461)
                      .....+....+.......+|.+.+++|.+..+.++..+...++..++.++.|+++||+|+|+..  ..+.+..++..+..
T Consensus         8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l--~~~~~~~~i~~~~~   85 (392)
T PRK10473          8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA--IPGAALFIIASLLC   85 (392)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH--HHHHHHHHHHHHHH
Confidence            4444555555666666889999999999999999999999999999999999999997765443  35555666666666


Q ss_pred             hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069        350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG  429 (461)
Q Consensus       350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~  429 (461)
                      ...++.+.+++..++.|++.+...+....++.|.+|+++|+++.++.+....++..++|.+++.+.+.. +|+..|++.+
T Consensus        86 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~  164 (392)
T PRK10473         86 SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMA  164 (392)
T ss_pred             HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHH
Confidence            777788888888899999999888889999999999999999999999999999999999999888776 4999999988


Q ss_pred             HHHHHHHHHHHH
Q psy15069        430 GAIFVSGVMLFV  441 (461)
Q Consensus       430 ~~~l~~~~~~~~  441 (461)
                      ++.++..+..+.
T Consensus       165 ~~~~i~~~~~~~  176 (392)
T PRK10473        165 AMGILVLLLSLF  176 (392)
T ss_pred             HHHHHHHHHHHH
Confidence            877766655433

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.52  E-value=7.7e-14  Score=137.31  Aligned_cols=173  Identities=18%  Similarity=0.169  Sum_probs=137.4

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG  343 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~  343 (461)
                      +|.++.++++.++..++........+.+.++++.+..+.+++.+.+.+...+..++.|+++||+++|+.++.  +.++.+
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~--~~~~~~   79 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFI--ANGIKL   79 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHH--HHHHHH
Confidence            456788888888888877666677777778999999999999999999999999999999999877765553  334444


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchH
Q psy15069        344 AATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSP  423 (461)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~  423 (461)
                      +..+.+.+..+.   ++.+++.|++.+...|...+++.|++|+++|+++.|+.+....++..+||.++|.+.+..  |..
T Consensus        80 ~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~--~~~  154 (393)
T PRK11195         80 LGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH--AEA  154 (393)
T ss_pred             HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence            443333344443   556788999999999999999999999999999999999999999999999999999963  777


Q ss_pred             HHHHHhHHHHHHHHHHHHHH
Q psy15069        424 AFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       424 ~f~~~~~~~l~~~~~~~~~~  443 (461)
                      .+.+.+.+.+++.+..+.++
T Consensus       155 ~~~i~~~~~~~~~~~~~~l~  174 (393)
T PRK11195        155 ALAVCALIYLLAALFNLFIP  174 (393)
T ss_pred             HHHHHHHHHHHHHHHHhcCC
Confidence            77766666555554444444

>KOG2816|consensus

Probab=99.52  E-value=2.3e-13  Score=134.13  Aligned_cols=321  Identities=19%  Similarity=0.243  Sum_probs=220.6

Q ss_pred             HHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHhhh-hccch
Q psy15069         33 VGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRS  111 (461)
Q Consensus        33 ~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg  111 (461)
                      .+...+.++..|.+.||+|||..+....+...+..+...+.. +|.+.+ ..+ .| +.++......+++++.. .++|.
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~~-~~l-~g-~~~~~~s~~~a~vadis~~~~R~  147 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFLL-LGL-SG-GFSAIFSVGFAYVADISSEEERS  147 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhhh-ccc-cc-chhhhhhhhhhheeeccchhHHH
Confidence            566678899999999999999999999999998888777755 333332 221 11 22344555666777776 58899


Q ss_pred             hhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCccccccccccc
Q psy15069        112 LATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKP  191 (461)
Q Consensus       112 ~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (461)
                      ...|+.......+..++|.+++.+.+.+|.-.+|.+..+..+...+..++..|++..+++.+..  .             
T Consensus       148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~--~-------------  212 (463)
T KOG2816|consen  148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA--T-------------  212 (463)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccc--c-------------
Confidence            9999999999999999999999999999999999999999888888777777655332211000  0             


Q ss_pred             ccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHH
Q psy15069        192 KQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFT  271 (461)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  271 (461)
                       .++.                     .+++..         +.+             .........  ..-.+|..+.++
T Consensus       213 -~~~~---------------------~~~~~~---------~~~-------------~~~~~~~~~--~~~~~r~~l~l~  246 (463)
T KOG2816|consen  213 -LREL---------------------TPGSLD---------SSH-------------VADAFQSLT--KVGPDRLLLLLL  246 (463)
T ss_pred             -cccc---------------------CCCccc---------chh-------------hhhhhhhhc--ccCCCccchHHH
Confidence             0000                     000000         000             000000000  012234444444


Q ss_pred             HHHHHHhhcc-ccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhh-hccCCCCcchhHHHHHHHHHHHHHHHH
Q psy15069        272 ISNIFTSIGF-NVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILG-YISDRPCVNRLYIYNGCLAICGAATVI  348 (461)
Q Consensus       272 ~~~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~  348 (461)
                      +..++..... ....-.++.|+ ..+++++.+.+...+..+....+++.+.. .+...++.++  +...++..-.+..+.
T Consensus       247 l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~--~i~lGl~~~~~~~~~  324 (463)
T KOG2816|consen  247 LVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR--LISLGLLSEFLQLLL  324 (463)
T ss_pred             HHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--HhhHHHHHHHHHHHH
Confidence            4444433332 22221345566 67899999999999999999999998877 5555555555  555677777777888


Q ss_pred             hhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCc
Q psy15069        349 CAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSY  421 (461)
Q Consensus       349 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~  421 (461)
                      ..+..+.|.++....+.+ ......|..-+.+..+.+++++|++.++...+..+...++|.+.+.++..+-++
T Consensus       325 ~af~~~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~  396 (463)
T KOG2816|consen  325 FAFATETWMMFAAGVVVA-LAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDD  396 (463)
T ss_pred             HHHhccchhhhHHHHHHH-hhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence            888888888776665554 445567777888999999999999999999999999999999999887554333

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.52  E-value=1.3e-13  Score=136.39  Aligned_cols=175  Identities=19%  Similarity=0.256  Sum_probs=140.4

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchh-----hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSN-----ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGC  338 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~  338 (461)
                      ++.+..+++..++...+......++|.+.+++|.+..+     .+++.++..+...++.++.|+++||+++|+..  ..+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~   90 (408)
T PRK09874         13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML--LRS   90 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH--HHH
Confidence            33455667777778888888888999999999988655     47888899999999999999999997655443  345


Q ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069        339 LAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST  418 (461)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~  418 (461)
                      .+..++..++..+.++++.+++..++.|++.+ ..+.....+.+.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~  169 (408)
T PRK09874         91 ALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY  169 (408)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            55556666666677888888888889998755 45666778889999999999999999999999999999999999876


Q ss_pred             CCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        419 LSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       419 g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      + |+..|++.+++.++..+..+..
T Consensus       170 ~-~~~~~~~~~~~~~~~~~~~~~~  192 (408)
T PRK09874        170 G-LRPVFFITASVLFLCFLVTLFC  192 (408)
T ss_pred             C-HHHHHHHHHHHHHHHHHHHHHH
Confidence            4 9999998888777666554443

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.52  E-value=7.7e-14  Score=140.51  Aligned_cols=175  Identities=17%  Similarity=0.210  Sum_probs=140.1

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC-CCcchhHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR-PCVNRLYIYNGCLAIC  342 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~  342 (461)
                      +.++.++...+...+++|....+++.|+ +++|++..+++++.+.+.....+..+++|+++|| +|+||..+  .+.++.
T Consensus        14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~--~g~~~~   91 (489)
T PRK10207         14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIV--LGAIVL   91 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHH--HHHHHH
Confidence            3567777788888999999999999998 7799999999999999888888888999999999 78777655  455555


Q ss_pred             HHHHHHhhhhhhHH-HHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        343 GAATVICAFCYNYV-ELAIYAGVFGAMIGAYVGLTSVILVDLLGLD--RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       343 ~~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                      +++.+++.+..+.. .+++.+++.|++.|...|...+++.|.+|++  +|+.++++.+...++|..+||.++|++.++.|
T Consensus        92 ~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g  171 (489)
T PRK10207         92 AIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG  171 (489)
T ss_pred             HHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            55555555554433 3446778889999999999999999999877  45779999999999999999999999999875


Q ss_pred             CchHHHHHHhHHHHHHHHHHHHH
Q psy15069        420 SYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       420 ~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                       |++.|++.++..+++.+.....
T Consensus       172 -w~~~F~i~~i~~~~~~~~~~~~  193 (489)
T PRK10207        172 -YSVTYNLCGAGLIIALLVYFAC  193 (489)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHc
Confidence             9999988766554444444333

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.52  E-value=1.2e-13  Score=135.16  Aligned_cols=169  Identities=14%  Similarity=0.167  Sum_probs=133.0

Q ss_pred             HHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069        271 TISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC  349 (461)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  349 (461)
                      ++.+++...+.....+.+|.++ +++|.+..+.+++.+...+...+.+++.|+++||+|+||..+. .+.....+..++.
T Consensus         3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~-~~~~~~~~~~~~~   81 (375)
T TIGR00899         3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLIL-FCCLLAALACLLF   81 (375)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH-HHHHHHHHHHHHH
Confidence            4456677777788888999987 6899999999999999999999999999999999877665443 3334444445556


Q ss_pred             hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH--HHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069        350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA--FGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL  427 (461)
Q Consensus       350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~  427 (461)
                      .+.++++.+++..++.|.+.+...|....+..|..|+++|+.+  .+......++|..+||.+++.+.+.. +|+..|++
T Consensus        82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~f~~  160 (375)
T TIGR00899        82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVMFLT  160 (375)
T ss_pred             HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHHHHH
Confidence            6677888777777777877777778877888888877766654  57888888999999999999999876 49999999


Q ss_pred             HhHHHHHHHHHHHH
Q psy15069        428 AGGAIFVSGVMLFV  441 (461)
Q Consensus       428 ~~~~~l~~~~~~~~  441 (461)
                      .+++.++..+..+.
T Consensus       161 ~~~~~~~~~~~~~~  174 (375)
T TIGR00899       161 AALAFVLCGVLVWL  174 (375)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88877766655443

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.51  E-value=6.3e-14  Score=141.24  Aligned_cols=174  Identities=7%  Similarity=-0.019  Sum_probs=137.8

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT  346 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  346 (461)
                      +....+.+++.+.....+....|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|+|+...  .++++.++..
T Consensus        31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~--~~~~~~~~~~  108 (467)
T PRK09556         31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLP--FLLILSAICM  108 (467)
T ss_pred             HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHH--HHHHHHHHHH
Confidence            34455566666667777888899988999999999999999999999999999999999987666543  3333333333


Q ss_pred             HHhh-----hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc--C
Q psy15069        347 VICA-----FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST--L  419 (461)
Q Consensus       347 ~~~~-----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~--g  419 (461)
                      +...     ..++++.+++.+++.|++.+...+....++.+++|+++|+++.|+.+....+|.++++.+..++.+..  +
T Consensus       109 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~  188 (467)
T PRK09556        109 LGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDG  188 (467)
T ss_pred             HHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccC
Confidence            3332     35788899999999999999888999999999999999999999999999999999998877666542  3


Q ss_pred             CchHHHHHHhHHHHHHHHHHHHH
Q psy15069        420 SYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       420 ~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      +|+..|.+.+++.++.++..++.
T Consensus       189 ~~~~~f~~~g~~~~~~~i~~~~~  211 (467)
T PRK09556        189 HVIGMFIFPSIIALIIGFIGLRY  211 (467)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHh
Confidence            58888888777776655554443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.51  E-value=1.5e-13  Score=136.00  Aligned_cols=160  Identities=13%  Similarity=0.090  Sum_probs=133.8

Q ss_pred             hhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHH
Q psy15069        278 SIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVE  357 (461)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (461)
                      ......+.+.+|.+.+++|.++.+.++..+.+.++..++.++.|+++||+++|+...  .+..+.+++.+...+.++.+.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~--~~~~~~~~~~~~~~~~~~~~~  103 (406)
T PRK15402         26 YIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVML--AGVAFFILTCLAILLAQSIEQ  103 (406)
T ss_pred             HhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH--HHHHHHHHHHHHHHHHccHHH
Confidence            345566667778888999999999999999999999999999999999987665433  455566666666677788888


Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHH
Q psy15069        358 LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV  437 (461)
Q Consensus       358 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~  437 (461)
                      +++..++.|++.+...+.....+.|.+|++++.++.++......++..+||.+++.+.+.. +|+..|++.+++.++..+
T Consensus       104 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~~~~~~~~~~~~~~~  182 (406)
T PRK15402        104 FTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRGMFVLFAALAALSFF  182 (406)
T ss_pred             HHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHHH
Confidence            8888999999998888888889999999999999999998888899999999999998876 599999988888777665


Q ss_pred             HHH
Q psy15069        438 MLF  440 (461)
Q Consensus       438 ~~~  440 (461)
                      ..+
T Consensus       183 ~~~  185 (406)
T PRK15402        183 GLW  185 (406)
T ss_pred             HHH
Confidence            543

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.51  E-value=6.8e-14  Score=138.15  Aligned_cols=168  Identities=13%  Similarity=0.084  Sum_probs=135.2

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  342 (461)
                      ++++..+.+..++...+.......+|.++ +++|.|..+.+++.+...++..+++++.|+++||+|+|+....  +.++.
T Consensus        14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~--~~~~~   91 (399)
T PRK05122         14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF--GLCGC   91 (399)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH--HHHHH
Confidence            45677788888888888888888999887 7889999999999999999999999999999999887776553  33333


Q ss_pred             HHH---HHHhhhhh-----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee
Q psy15069        343 GAA---TVICAFCY-----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL  414 (461)
Q Consensus       343 ~~~---~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l  414 (461)
                      +++   .....+.+     +++.+++.+++.|++.+...+....++.+.+|+++|+++.++......+|..+||.+++.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l  171 (399)
T PRK05122         92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL  171 (399)
T ss_pred             HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence            222   22222222     4556778889999999998888888889999999999999999999999999999999999


Q ss_pred             ecccCCchHHHHHHhHHHHH
Q psy15069        415 YDSTLSYSPAFFLAGGAIFV  434 (461)
Q Consensus       415 ~~~~g~~~~~f~~~~~~~l~  434 (461)
                      .+..| |+..+++.+++.++
T Consensus       172 ~~~~g-~~~~~~~~~~~~~~  190 (399)
T PRK05122        172 YHWGG-LAGLGLLIMLLALL  190 (399)
T ss_pred             HHccc-HHHHHHHHHHHHHH
Confidence            98875 88877765554433

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.50  E-value=1.4e-13  Score=134.89  Aligned_cols=157  Identities=17%  Similarity=0.243  Sum_probs=134.3

Q ss_pred             cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy15069        281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAI  360 (461)
Q Consensus       281 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (461)
                      ...+.+.+|.+.+++|+++.+.+++.+...++..+++++.|+++||+++|+.  +..+.++.+++.+...+.++.+.+++
T Consensus         7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~   84 (377)
T PRK11102          7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV--ILGGTLVFALAAVACALAQTIDQLIY   84 (377)
T ss_pred             HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH--HHHHHHHHHHHHHHHHHHccHHHHHH
Confidence            3445678888999999999999999999999999999999999999765443  44566666677777777888888889


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        361 YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       361 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      ..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+++.+.+..+ |+..|++.+++.++..+...
T Consensus        85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~  163 (377)
T PRK11102         85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAALVF  163 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHHHH
Confidence            99999999999889999999999999999999999999999999999999999999764 99999888877776655443

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.50  E-value=2.6e-13  Score=133.63  Aligned_cols=153  Identities=12%  Similarity=0.036  Sum_probs=132.3

Q ss_pred             ccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069        282 NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIY  361 (461)
Q Consensus       282 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (461)
                      ..+...+|.+.+++|.|.++.+++.+.+.++..++.++.|+++||+|+|+..  ..+..+.+++.+...++++++.+++.
T Consensus        26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l--~~~~~l~~~~~~~~~~a~~~~~ll~~  103 (393)
T PRK09705         26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV--AISLLLIAVGALMRELYPQSALLLSS  103 (393)
T ss_pred             hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH--HHHHHHHHHHHHHHHHCcchHHHHHH
Confidence            5677889999999999999999999999999999999999999997655554  46777888888888899999999999


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHH
Q psy15069        362 AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV  437 (461)
Q Consensus       362 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~  437 (461)
                      +++.|++.+...+....++.+.+| ++|+.+.|+......+|..+|+.+.+.+.++.++|+..+.+.++..++..+
T Consensus       104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~  178 (393)
T PRK09705        104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF  178 (393)
T ss_pred             HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            999999999988888889999997 789999999999999999999999999888765698887766555444433

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.50  E-value=2.3e-14  Score=140.03  Aligned_cols=165  Identities=13%  Similarity=0.122  Sum_probs=136.5

Q ss_pred             HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh
Q psy15069        274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY  353 (461)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (461)
                      +++.+.....+....|.+.+++|.+..+.+++.+...++..++.++.|+++||+++|+..  ..+.++.+++.++..+.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~~~~~~~   81 (379)
T TIGR00881         4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL--PIGLILCAIVNLFFGFST   81 (379)
T ss_pred             hhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh--HHHHHHHHHHHHHHHHhh
Confidence            445556666777788887799999999999999999999999999999999997765544  355666667777777888


Q ss_pred             hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcc-ceeeeeecccCCchHHHHHHhHHH
Q psy15069        354 NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGP-PIAGFLYDSTLSYSPAFFLAGGAI  432 (461)
Q Consensus       354 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp-~i~g~l~~~~g~~~~~f~~~~~~~  432 (461)
                      +.+.+++..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++| .+.+.+.+.. +|+..|++.+++.
T Consensus        82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  160 (379)
T TIGR00881        82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFIVPGIIA  160 (379)
T ss_pred             hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999 4655565554 5999998888777


Q ss_pred             HHHHHHHHH
Q psy15069        433 FVSGVMLFV  441 (461)
Q Consensus       433 l~~~~~~~~  441 (461)
                      ++..+..+.
T Consensus       161 ~~~~~~~~~  169 (379)
T TIGR00881       161 IIVSLICFL  169 (379)
T ss_pred             HHHHHHHhe
Confidence            665554443

>PRK11043 putative transporter; Provisional

Probab=99.50  E-value=2.9e-13  Score=133.77  Aligned_cols=166  Identities=10%  Similarity=0.125  Sum_probs=134.6

Q ss_pred             HHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh
Q psy15069        275 IFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN  354 (461)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (461)
                      .+..++...+.+.+|.+.+++|.++.+.++..+...++..+++++.|+++||+++|+...  .+..+.++..+...+.++
T Consensus        16 ~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~~~~~~~~~~~~   93 (401)
T PRK11043         16 MLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLL--AGLSLFALGSLGMLWVES   93 (401)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHH--HHHHHHHHHHHHHHHhcC
Confidence            333444445555556667899999999999999999999999999999999987665443  455555666666667788


Q ss_pred             HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHH
Q psy15069        355 YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFV  434 (461)
Q Consensus       355 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~  434 (461)
                      .+.+.+..++.|++.+...+....++.|.+|+++++...+..+....++..++|.+++++.+..| |+..|++.+++.++
T Consensus        94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~  172 (401)
T PRK11043         94 AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLFAITLL  172 (401)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHH
Confidence            88888889999998887777778889999999989999999999999999999999999999874 99999988887777


Q ss_pred             HHHHHHHHH
Q psy15069        435 SGVMLFVIP  443 (461)
Q Consensus       435 ~~~~~~~~~  443 (461)
                      ..+..+..+
T Consensus       173 ~~~~~~~~~  181 (401)
T PRK11043        173 LILPTLRLK  181 (401)
T ss_pred             HHHHHHHcC
Confidence            666555443

>TIGR00895 2A0115 benzoate transport

Probab=99.49  E-value=8.4e-14  Score=137.02  Aligned_cols=166  Identities=16%  Similarity=0.177  Sum_probs=135.5

Q ss_pred             HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069        270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC  349 (461)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  349 (461)
                      ..+..+.............|.+.+++|.+..+.+++.+...++.+++.++.|+++||+++|+.  +..+.++.+++.++.
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--~~~~~~~~~~~~~~~   99 (398)
T TIGR00895        22 SFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV--LLWSILLFSVFTLLC   99 (398)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH--HHHHHHHHHHHHHHH
Confidence            333444444455556667788889999999999999999999999999999999999764443  335555666666666


Q ss_pred             hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069        350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG  429 (461)
Q Consensus       350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~  429 (461)
                      .+.++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+++.+..| |+..|++.+
T Consensus       100 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~  178 (398)
T TIGR00895       100 ALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-WRSLFYVGG  178 (398)
T ss_pred             HHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-ceeehhhhh
Confidence            7778888888889999999999999999999999999999999999999999999999999999998865 888888886


Q ss_pred             HHHHHHHHH
Q psy15069        430 GAIFVSGVM  438 (461)
Q Consensus       430 ~~~l~~~~~  438 (461)
                      ++.++..+.
T Consensus       179 ~~~~~~~~~  187 (398)
T TIGR00895       179 IAPLLLLLL  187 (398)
T ss_pred             hHHHHHHHH
Confidence            555544443

>PRK12382 putative transporter; Provisional

Probab=99.49  E-value=2.3e-13  Score=134.00  Aligned_cols=166  Identities=13%  Similarity=0.115  Sum_probs=131.7

Q ss_pred             cchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069        263 RDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAI  341 (461)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~  341 (461)
                      .++.++.+.+..++...+.....+.+|.++ +++|.|..+.+++.+...++..+++++.|+++||+|+||..+.  +.+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~--~~~~   90 (392)
T PRK12382         13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQ--GMLA   90 (392)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHH--HHHH
Confidence            455667777777777777778888899887 7899999999999999999999999999999999877665443  3222


Q ss_pred             HHHHH---HHhhh-----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee
Q psy15069        342 CGAAT---VICAF-----CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF  413 (461)
Q Consensus       342 ~~~~~---~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~  413 (461)
                      ..++.   .+..+     .++++.+++.+++.|++.+...+...+++.+.+|+++|++++++......+|..+||.+++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~  170 (392)
T PRK12382         91 CGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLL  170 (392)
T ss_pred             HHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence            22221   11111     24677788889999999998888888889999999999999999999999999999999999


Q ss_pred             eecccCCchHHHHHHhHH
Q psy15069        414 LYDSTLSYSPAFFLAGGA  431 (461)
Q Consensus       414 l~~~~g~~~~~f~~~~~~  431 (461)
                      +.+..| |+..+.+..++
T Consensus       171 l~~~~g-~~~~~~~~~~~  187 (392)
T PRK12382        171 LHSHFG-FAALALTTMVL  187 (392)
T ss_pred             HHhccC-hHHHHHHHHHH
Confidence            988765 88766554433

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.49  E-value=2.9e-13  Score=137.62  Aligned_cols=164  Identities=18%  Similarity=0.230  Sum_probs=138.9

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  345 (461)
                      .+..+.+..++..+........+|.+.+++|.+..+.+++.+...++.+++.++.|+++||+|+|+..  ..+.++.+++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~   98 (496)
T PRK03893         21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM--VISIVLFSVG   98 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--HHHHHHHHHH
Confidence            45556677777777777777788888899999999999999999999999999999999997655543  3555666666


Q ss_pred             HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHH
Q psy15069        346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAF  425 (461)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f  425 (461)
                      .++..+.++++.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.. +|++.|
T Consensus        99 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~f  177 (496)
T PRK03893         99 TLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW-GWRALF  177 (496)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CHHHHH
Confidence            6777778889999999999999999999999999999999999999999999999999999999999999876 599988


Q ss_pred             HHHhHHH
Q psy15069        426 FLAGGAI  432 (461)
Q Consensus       426 ~~~~~~~  432 (461)
                      ++..+..
T Consensus       178 ~~~~~~~  184 (496)
T PRK03893        178 FIGILPI  184 (496)
T ss_pred             HHHHHHH
Confidence            7644433

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.49  E-value=3.8e-13  Score=135.70  Aligned_cols=167  Identities=11%  Similarity=0.117  Sum_probs=128.4

Q ss_pred             HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh
Q psy15069        274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY  353 (461)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (461)
                      .++.....+....++|.+.+++|++..+.+++.+...++..++.++.|+++||+|+|+..  ..+.++.++..++..+.+
T Consensus        45 ~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~--~~~~~~~~~~~~~~~~~~  122 (476)
T PLN00028         45 FFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS--AFLLMLTAPAVFCMSLVS  122 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--HHHHHHHHHHHHHHHHhc
Confidence            444444455566677788899999999999999999999999999999999998766543  345666667777777788


Q ss_pred             hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec----c----cCCchHHH
Q psy15069        354 NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD----S----TLSYSPAF  425 (461)
Q Consensus       354 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~----~----~g~~~~~f  425 (461)
                      +.+.+++.+++.|++.+...+ ...++.+++|+++|+++.|+.+...++|..+++.+.+.+.+    .    ..+|++.|
T Consensus       123 s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f  201 (476)
T PLN00028        123 SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAF  201 (476)
T ss_pred             CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHH
Confidence            888888888899988876443 44578899999999999999998888888877766654432    1    12599999


Q ss_pred             HHHhHHHHHHHHHHHHHH
Q psy15069        426 FLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       426 ~~~~~~~l~~~~~~~~~~  443 (461)
                      ++.+++.++..+..++++
T Consensus       202 ~i~g~l~l~~~l~~~~~~  219 (476)
T PLN00028        202 FVPGLLHIIMGILVLTLG  219 (476)
T ss_pred             HHHHHHHHHHHHHHHHHc
Confidence            999988877766655554

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.49  E-value=1.9e-13  Score=135.95  Aligned_cols=173  Identities=14%  Similarity=0.170  Sum_probs=132.4

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC-CcchhHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP-CVNRLYIYNGCLAICG  343 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~  343 (461)
                      .++.++...+...+++|....++|.|+ +++|++..+++.+.+.+.....++.+++|+++||+ |+||..+  .+.++..
T Consensus        10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~il--iG~il~~   87 (493)
T PRK15462         10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVM--LGALLMA   87 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH--HHHHHHH
Confidence            466677777788889999999999999 66899999999999999999999999999999997 7666544  4444444


Q ss_pred             HHHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHhhhhhccceeeeeecccCC
Q psy15069        344 AATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD--RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS  420 (461)
Q Consensus       344 ~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~  420 (461)
                      ++.+++...+ +....++...+..++.|...+...+++.|.+|++  +|.++.++.+...++|+.++|.+.|++.+..| 
T Consensus        88 lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-  166 (493)
T PRK15462         88 IGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-  166 (493)
T ss_pred             HHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-
Confidence            4444333322 2223333444555666666677788899999875  69999999999999999999999999998765 


Q ss_pred             chHHHHHHhHHHHHHHHHHHH
Q psy15069        421 YSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       421 ~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      |+..|.+.++..+++.+..+.
T Consensus       167 w~~~F~iaaigm~l~li~~~~  187 (493)
T PRK15462        167 WAMGFGLAAVGMIAGLVIFLC  187 (493)
T ss_pred             hHHHHHHHHHHHHHHHHHHHH
Confidence            999999877766555554443

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.49  E-value=2.7e-13  Score=135.59  Aligned_cols=175  Identities=13%  Similarity=0.107  Sum_probs=133.0

Q ss_pred             cchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069        263 RDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  342 (461)
                      +++.++...+.+...+.....+....|.+. +.|+++++.++..+...++..++.++.|+++||+++|+...  .+.++.
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~--~~~~~~  101 (438)
T TIGR00712        25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLP--AGLILS  101 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehH--HHHHHH
Confidence            444555566666666665555666666554 46999999999999999999999999999999987655433  444455


Q ss_pred             HHHHHHhhhh----hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069        343 GAATVICAFC----YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST  418 (461)
Q Consensus       343 ~~~~~~~~~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~  418 (461)
                      +++.++....    ++.+.+.+..++.|++.+...+.....+.|++|+++|+++.|+.+...++|+.++|.+.+.+.+..
T Consensus       102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~  181 (438)
T TIGR00712       102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF  181 (438)
T ss_pred             HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence            5554444332    355666777888999988888888888999999999999999999999999999998887666544


Q ss_pred             CCchHHHHHHhHHHHHHHHHHH
Q psy15069        419 LSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       419 g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      .+|+..|++.+++.++..+..+
T Consensus       182 ~~w~~~f~~~~~~~~i~~~~~~  203 (438)
T TIGR00712       182 NDWHAALYFPAICAIIVALFAF  203 (438)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHH
Confidence            4699999998888777554433

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.49  E-value=3e-13  Score=131.83  Aligned_cols=170  Identities=14%  Similarity=0.169  Sum_probs=132.6

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhh-HHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVK-LAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~  344 (461)
                      .+|..+++.+......+.+.++.|. +.+++|+++.+.+++.+...++..++.++.|+++||+|+|+..+  .+.++..+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~i   79 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTT--LSLLLLAI   79 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHH--HHHHHHHH
Confidence            4677778888888888888999997 44899999999999999999999999999999999977655443  55666667


Q ss_pred             HHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc------
Q psy15069        345 ATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS------  417 (461)
Q Consensus       345 ~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~------  417 (461)
                      +.++..+.+ +++.+++..++.|++.+. .+....++.+.+|+++|+++.++.....++|..+++.+++.+.+.      
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~  158 (366)
T TIGR00886        80 PCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAG  158 (366)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccc
Confidence            777777778 888888899999988654 455677899999999999999999988888887777776665542      


Q ss_pred             ---cCCchHHHH-HHhHHHHHHHHH
Q psy15069        418 ---TLSYSPAFF-LAGGAIFVSGVM  438 (461)
Q Consensus       418 ---~g~~~~~f~-~~~~~~l~~~~~  438 (461)
                         ..+|++.|+ ..+++.++..++
T Consensus       159 ~~~~~~w~~~~~~~~~~~~~~~~~~  183 (366)
T TIGR00886       159 LPAHLAWGWAFVIVPAGILLLPALL  183 (366)
T ss_pred             ccccccccchhHHHHHHHHHHHHHH
Confidence               125888884 334444443333

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.48  E-value=4e-13  Score=132.42  Aligned_cols=168  Identities=15%  Similarity=0.115  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV  347 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  347 (461)
                      +......++.........+.+|.+.+++|.|+.+.+++.+...++..++.++.|+++||+|+|+...  .+..+..+..+
T Consensus        11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~--~~~~~~~~~~~   88 (394)
T PRK11652         11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVIL--VGMSIFILGTL   88 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH--HHHHHHHHHHH
Confidence            3344444444555556667788888999999999999999999999999999999999987655443  45555566666


Q ss_pred             HhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069        348 ICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL  427 (461)
Q Consensus       348 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~  427 (461)
                      ...+.++.+.+++.+++.|++.+...+....+..|.+++++++.+.++.+....++..++|.+++.+.+..| |+..|++
T Consensus        89 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~f~~  167 (394)
T PRK11652         89 VALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WRACYLF  167 (394)
T ss_pred             HHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hHHHHHH
Confidence            666778888888999999999888788888888999998999999999999999999999999999988764 9999998


Q ss_pred             HhHHHHHHHHH
Q psy15069        428 AGGAIFVSGVM  438 (461)
Q Consensus       428 ~~~~~l~~~~~  438 (461)
                      .+++.++..+.
T Consensus       168 ~~~~~~~~~~~  178 (394)
T PRK11652        168 LLLLGAGVTFS  178 (394)
T ss_pred             HHHHHHHHHHH
Confidence            87766655443

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=99.48  E-value=1.4e-13  Score=123.99  Aligned_cols=163  Identities=20%  Similarity=0.252  Sum_probs=132.1

Q ss_pred             CcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc-------c
Q psy15069          2 GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA-------K   74 (461)
Q Consensus         2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~-------~   74 (461)
                      |..|+||.+.|++.+++|.|..|...+.....++..+ +++.|.+.||+|+|.++.+|.++..+++.+...+       .
T Consensus        16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~   94 (250)
T PF06813_consen   16 GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSL   94 (250)
T ss_pred             CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCcc
Confidence            8899999999999999999999999999999999875 6999999999999999999999999999876443       3


Q ss_pred             chhhHHHHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHH-HH
Q psy15069         75 NVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVT-VL  153 (461)
Q Consensus        75 ~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~-~l  153 (461)
                      ++|.+++ +.++.|.+.+....++.....+.||++||.+.|+.-+..++++.+...+...+.+.-.-+. +++++.. .+
T Consensus        95 ~~~~~~~-~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~f-ll~la~~~~~  172 (250)
T PF06813_consen   95 PVWLMCL-FLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSF-LLFLAVLPAV  172 (250)
T ss_pred             chHHHHH-HHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHH-HHHHHHHHHH
Confidence            6777776 4577788877777787777778999999999999999999999999998888876522333 3344443 33


Q ss_pred             HHHHHHhhcccCCC
Q psy15069        154 SAVLFGILLRPLEE  167 (461)
Q Consensus       154 ~~~i~~~~~~~~~~  167 (461)
                      +..+...+.|+.++
T Consensus       173 v~l~~~~~vr~~~~  186 (250)
T PF06813_consen  173 VCLVAMFFVRPVPP  186 (250)
T ss_pred             HHHHHhhheeccCC
Confidence            44455566666543

>KOG2325|consensus

Probab=99.48  E-value=2.1e-13  Score=132.59  Aligned_cols=354  Identities=13%  Similarity=0.084  Sum_probs=206.9

Q ss_pred             HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCc-ceeeehhhHHHHHHHHHh-hc---cc-chhhHHHHhhcccccc
Q psy15069         17 VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGC-RNVTICGAILGSACLAVS-VF---AK-NVITLCITIGFGTGLG   90 (461)
Q Consensus        17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~-r~~~~~g~~~~~~~~~l~-~~---~~-~~~~l~i~~~~l~G~g   90 (461)
                      |.+.+.+-.|++.++..++..+++|++|.+..|.+. |+-+++|.+++.++.++. ++   .+ .-|.+++ .|++.|+|
T Consensus        65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~-~R~l~Gvg  143 (488)
T KOG2325|consen   65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLV-ARILTGVG  143 (488)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHH-HHHHcCcC
Confidence            377788889999999999999999999999999997 888999999999999875 22   33 3455555 49999999


Q ss_pred             ccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhh--c-----------hhHHHHHHHHHHHHHHH
Q psy15069         91 FGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY--G-----------WKITLLVLSVTVLSAVL  157 (461)
Q Consensus        91 ~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~--g-----------w~~~f~i~~~~~l~~~i  157 (461)
                      .+.....-..+.....+++|.+|++....+..+|.++||.+...+..-.  |           +..+-|+..++.++..+
T Consensus       144 ~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v  223 (488)
T KOG2325|consen  144 VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV  223 (488)
T ss_pred             cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence            8876555444444455889999999988888899888888887765411  1           23344666666666655


Q ss_pred             HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069        158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (461)
                      ...+..++.+....++...+. +++                                                 ++++++
T Consensus       224 ~i~~~f~E~~~~~~~~~~~~~-~~~-------------------------------------------------~~~~~~  253 (488)
T KOG2325|consen  224 IILFFFKEVYRGIIDKKKRSV-EEE-------------------------------------------------KSDIEK  253 (488)
T ss_pred             HHHhheeecccCccccccccc-hhh-------------------------------------------------ccchhh
Confidence            544444333222211100000 000                                                 000000


Q ss_pred             cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHH----HHHHhhh
Q psy15069        238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSL----ISIVGAA  312 (461)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~----~~~~~~~  312 (461)
                      .          + .        +-+..+..+...+..+...+.+....+..+... ..++++.+++...    .++.++.
T Consensus       254 ~----------~-~--------~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~l  314 (488)
T KOG2325|consen  254 V----------K-K--------PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGIL  314 (488)
T ss_pred             h----------c-c--------CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHH
Confidence            0          0 0        011122233444445555555544444444433 5666665554443    3333333


Q ss_pred             hhhhhhhhhhcc-CCCCcchhHHHHHHHHHHH--HHHHHhhhhhh----------------H-----------HH-HHHH
Q psy15069        313 NMVSRVILGYIS-DRPCVNRLYIYNGCLAICG--AATVICAFCYN----------------Y-----------VE-LAIY  361 (461)
Q Consensus       313 ~~~g~~~~g~l~-dr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------------~-----------~~-~~~~  361 (461)
                      ..+-.+..+... -++..|+...+........  +.+..+.+...                +           +. ++..
T Consensus       315 s~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~  394 (488)
T KOG2325|consen  315 SVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISF  394 (488)
T ss_pred             HHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeeh
Confidence            333333333322 1111222222221111111  11111111110                0           01 1122


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        362 AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       362 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      .+++|.+.-.......++-++..++++.++..|.+......+..+||.+...++...| +++...+.+...++...++..
T Consensus       395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~~l~~~  473 (488)
T KOG2325|consen  395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLVVAALWIV  473 (488)
T ss_pred             hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHHHHHHH
Confidence            3445555544555566778999999999999999999999999999999888888775 777777766666665555443

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.48  E-value=3.8e-13  Score=133.27  Aligned_cols=163  Identities=17%  Similarity=0.140  Sum_probs=136.2

Q ss_pred             HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh
Q psy15069        274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY  353 (461)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (461)
                      .++..........-+|.+.++++.+..+.++..+.+.++..+++++.|+++||+|+|+..+  .+..+.+++.++..+.+
T Consensus        25 ~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~--~~~~~~~~~~~~~~~a~  102 (413)
T PRK15403         25 DFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLI--TGALIFTLACAATLFTT  102 (413)
T ss_pred             HHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHH--HHHHHHHHHHHHHHHcC
Confidence            3334445566667777877999999999999999999999999999999999987666443  45666667777777888


Q ss_pred             hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHH
Q psy15069        354 NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF  433 (461)
Q Consensus       354 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l  433 (461)
                      +.+.+++.+++.|++.+...+....++.|.+|++++++++++.+....++..+||.+++.+.+.. +|++.|++.+++.+
T Consensus       103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~~f~~~~~~~~  181 (413)
T PRK15403        103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAIIAVMGL  181 (413)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHH
Confidence            99999999999999888766777788899999999999999999999999999999999998875 59999999888877


Q ss_pred             HHHHHH
Q psy15069        434 VSGVML  439 (461)
Q Consensus       434 ~~~~~~  439 (461)
                      ++.+..
T Consensus       182 i~~~~~  187 (413)
T PRK15403        182 IAFVGL  187 (413)
T ss_pred             HHHHHH
Confidence            766543

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.48  E-value=2.2e-13  Score=132.49  Aligned_cols=157  Identities=13%  Similarity=0.026  Sum_probs=123.2

Q ss_pred             cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy15069        281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAI  360 (461)
Q Consensus       281 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (461)
                      ...+...+|.+.+++|+|..+.+++.+.+.++..++++..|+++||+|+|+. + ..++.....+.......++++.+++
T Consensus         7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~   84 (368)
T TIGR00903         7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF-L-FGSLATFAAAAGRLLDPFNYEWLLA   84 (368)
T ss_pred             HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH-H-HHHHHHHHHHHHHHHHhccHHHHHH
Confidence            3455667888889999999999999999999999999999999999874443 2 2233222222222222358889999


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        361 YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       361 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      .+++.|++.+.. ......+.|.+|+++|+++.++.+....+|..+++.+++++.+.. +|+..|++.+++.++..++++
T Consensus        85 ~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~~~~  162 (368)
T TIGR00903        85 CQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGIILVL  162 (368)
T ss_pred             HHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHHHH
Confidence            999999998864 444455689999999999999999999999999999999998876 599999998888776655544


Q ss_pred             H
Q psy15069        441 V  441 (461)
Q Consensus       441 ~  441 (461)
                      .
T Consensus       163 ~  163 (368)
T TIGR00903       163 A  163 (368)
T ss_pred             H
Confidence            3

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.47  E-value=2.3e-13  Score=133.54  Aligned_cols=163  Identities=11%  Similarity=0.060  Sum_probs=126.2

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH-
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA-  345 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~-  345 (461)
                      .+.+.+.+++.+.++....+++|.|++++|+|..+++++.+...+...+++++.|+++||++++.... ........+. 
T Consensus         6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~l~~   84 (382)
T TIGR00902         6 FRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIAL-RLLALASAIFA   84 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH-HHHHHHHHHHH
Confidence            34466777777787888889999999999999999999999999999999999999999975422111 1111111111 


Q ss_pred             HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHH
Q psy15069        346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAF  425 (461)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f  425 (461)
                      .......++++.+++...+.+.+.+...|...++..+.  .+++++++|......++|.+++|.++|.+.++.| |+..|
T Consensus        85 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f  161 (382)
T TIGR00902        85 AAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNIL  161 (382)
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHH
Confidence            12233567888888888888888887788877776654  4778999999999999999999999999999875 99998


Q ss_pred             HHHhHHHH
Q psy15069        426 FLAGGAIF  433 (461)
Q Consensus       426 ~~~~~~~l  433 (461)
                      ++.+.+.+
T Consensus       162 ~~~~~~~~  169 (382)
T TIGR00902       162 AILTAGLA  169 (382)
T ss_pred             HHHHHHHH
Confidence            88765533

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00897 2A0118 polyol permease family

Probab=99.47  E-value=6.2e-13  Score=131.44  Aligned_cols=164  Identities=14%  Similarity=0.112  Sum_probs=127.5

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~  344 (461)
                      +.+....++.++...+.+....+++.+++++|.+..+.+++.+.+.++..+++++.|++.||+++||...  .+..+.++
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~--~~~~~~~~   90 (402)
T TIGR00897        13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM--IGLLLWCV   90 (402)
T ss_pred             chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH--HHHHHHHH
Confidence            3466677777777777777788899999999999999999999999999999999999999977666544  34444444


Q ss_pred             HHHHh---hhh-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhh-hhccceeeeeecccC
Q psy15069        345 ATVIC---AFC-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIAS-LVGPPIAGFLYDSTL  419 (461)
Q Consensus       345 ~~~~~---~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~~gp~i~g~l~~~~g  419 (461)
                      +.+..   ... ++.+.+++..++.|++.+...+.....+.+.+|+++|+++.|+.+...++|. .++|.+++++.+..|
T Consensus        91 ~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g  170 (402)
T TIGR00897        91 GHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG  170 (402)
T ss_pred             HHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            33322   232 4677777788889998887777777788899999999999999999999996 589999999998775


Q ss_pred             CchHHHHHHhHH
Q psy15069        420 SYSPAFFLAGGA  431 (461)
Q Consensus       420 ~~~~~f~~~~~~  431 (461)
                       |+..++.....
T Consensus       171 -~~~~~~~~~~~  181 (402)
T TIGR00897       171 -EMNTLWSALAF  181 (402)
T ss_pred             -hHHHHHHHHHH
Confidence             54444443333

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.47  E-value=5e-13  Score=131.12  Aligned_cols=153  Identities=12%  Similarity=0.076  Sum_probs=133.1

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG  343 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~  343 (461)
                      ++.++.+++..++.........+.+|.+.+++|.|..+.|++.+...++..+++++.|+++||+|+|+..  ..+.++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~--~~~~~~~~   82 (381)
T PRK03633          5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY--YLASLIFA   82 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--HHHHHHHH
Confidence            4457888888888889999999999999999999999999999999999999999999999996655544  34566666


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069        344 AATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST  418 (461)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~  418 (461)
                      +..+...+.++++.+++.+++.|++.+...+.....+.+..++++|+++++..+...++|..+||.+.+.+.+..
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~  157 (381)
T PRK03633         83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL  157 (381)
T ss_pred             HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            666667778899999999999999999888887777788888899999999999999999999999999988753

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.46  E-value=6.4e-14  Score=116.22  Aligned_cols=135  Identities=21%  Similarity=0.371  Sum_probs=118.2

Q ss_pred             HHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHhhhh-
Q psy15069         29 ASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-  107 (461)
Q Consensus        29 ~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-  107 (461)
                      .+.+.++..+++++.|++.||+|||+.+..+..+..++.+...++++++.+++. +++.|++.+...+.....+.+.+| 
T Consensus         4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~   82 (141)
T TIGR00880         4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIA-RFLQGFGAAFALVAGAALIADIYPP   82 (141)
T ss_pred             EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHHHHHHHHHHhHHHHHHHHCCh
Confidence            344567778899999999999999999999999999999988888999888875 799999999888888888899885 


Q ss_pred             ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069        108 RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus       108 ~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      ++|++++++......+|..++|.+.+.+.+..||++.+++.++..++..+..+++.|
T Consensus        83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (141)
T TIGR00880        83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP  139 (141)
T ss_pred             hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence            789999999999999999999999999999899999999988887777666655543

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.46  E-value=6.7e-13  Score=128.09  Aligned_cols=172  Identities=19%  Similarity=0.270  Sum_probs=148.0

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV  347 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  347 (461)
                      +.+.+..+......+......|.+.++.|.+..+.++..+...++..++.++.|+++||+++|+  .+..+..+..++.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~--~~~~~~~~~~~~~~   79 (352)
T cd06174           2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR--VLLLGLLLFALGSL   79 (352)
T ss_pred             HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch--hhHHHHHHHHHHHH
Confidence            3456667777888888889999999999999999999999999999999999999999977655  34456666677777


Q ss_pred             HhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069        348 ICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL  427 (461)
Q Consensus       348 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~  427 (461)
                      ...+.++.+.+++..++.|++.+...+....++.|.+|+++|++..++.+....+|..++|.+++.+.+..+ |+..+++
T Consensus        80 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~  158 (352)
T cd06174          80 LLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLI  158 (352)
T ss_pred             HHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHH
Confidence            777778888999999999999999999999999999999999999999999999999999999999999864 9999988


Q ss_pred             HhHHHHHHHHHHHHH
Q psy15069        428 AGGAIFVSGVMLFVI  442 (461)
Q Consensus       428 ~~~~~l~~~~~~~~~  442 (461)
                      .++..++..+..+..
T Consensus       159 ~~~~~~~~~~~~~~~  173 (352)
T cd06174         159 LAILGLLLALLLLFL  173 (352)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            888777766555443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.46  E-value=2.7e-13  Score=134.86  Aligned_cols=180  Identities=16%  Similarity=0.218  Sum_probs=123.2

Q ss_pred             ccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q psy15069        260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGC  338 (461)
Q Consensus       260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~  338 (461)
                      ..+++|.+|.+.+..++..++.+.+.+++|.|+ +++|+++.+.|++.+...++..+++++.|+++||+|+|+..+....
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~   84 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS   84 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence            457889999999999999988888999999999 5599999999999999999999999999999999887665543222


Q ss_pred             HHHHHHH-HHHhhhhh----hH-HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceee
Q psy15069        339 LAICGAA-TVICAFCY----NY-VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG  412 (461)
Q Consensus       339 ~~~~~~~-~~~~~~~~----~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g  412 (461)
                      ....+.. .......+    .. ....+..+..|.+.....+....+..+ . .++++..+|......++|..++|.++|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g  162 (420)
T PRK09528         85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAG  162 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHH
Confidence            2221111 11111111    01 011111222333322223333333222 2 245677889999999999999999999


Q ss_pred             eeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        413 FLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       413 ~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      .+.+.  +|+..|++.+++.++..++.+..+
T Consensus       163 ~l~~~--~~~~~f~~~~~~~~~~~~~~~~~~  191 (420)
T PRK09528        163 ILFNI--NPQINFWLGSGSALILLVLLFFAK  191 (420)
T ss_pred             HHHhc--CchHhHHHHHHHHHHHHHHHhccc
Confidence            99885  588899888877777666655543

>KOG3764|consensus

Probab=99.45  E-value=3e-13  Score=125.76  Aligned_cols=150  Identities=19%  Similarity=0.244  Sum_probs=133.8

Q ss_pred             HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhH
Q psy15069        293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAY  372 (461)
Q Consensus       293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  372 (461)
                      ++.+-+.++.|++++...+.+++.+++.|.+.||+|+  +..+.+++.++....+++.+.++++.+++++.+.|++.++.
T Consensus        99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy--~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~  176 (464)
T KOG3764|consen   99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGY--KIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFA  176 (464)
T ss_pred             cCccccccchhHHHHHHHHHHHHhcccchhhHHHhcc--ccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHH
Confidence            4456678899999999999999999999999999654  45556788888888899999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCccc-hhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069        373 VGLTSVILVDLLGLDR-LTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL  445 (461)
Q Consensus       373 ~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~  445 (461)
                      .....++++|.+|+++ |++++|+.-.+.++|..+||+.+|.+||..| ++..|++.++++++-..+.+++-+.
T Consensus       177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p  249 (464)
T KOG3764|consen  177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEP  249 (464)
T ss_pred             HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCc
Confidence            9999999999999765 6999999999999999999999999999876 9999999999999988876665443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.45  E-value=1.3e-13  Score=139.04  Aligned_cols=149  Identities=13%  Similarity=0.153  Sum_probs=124.3

Q ss_pred             HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhh
Q psy15069        294 QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGA  371 (461)
Q Consensus       294 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~  371 (461)
                      +++++..+.|.+.+.+.++..+++++.|+++||+++|+...  .+.++.++..++.++  ..+.+.+++.+++.|++.+.
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~--~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~  147 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIG--IGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGS  147 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhH--HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhccc
Confidence            67899999999999999999999999999999987665443  444455555444433  34567788889999999999


Q ss_pred             HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        372 YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      ..+....++.|++|+++|+++.|+.+....+|.+++|.+.+.+.+...+|+..|++.+++.++..++++...+
T Consensus       148 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~  220 (465)
T TIGR00894       148 VSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA  220 (465)
T ss_pred             chhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999987435999999998888777766655543

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.45  E-value=1e-12  Score=131.79  Aligned_cols=158  Identities=16%  Similarity=0.160  Sum_probs=128.6

Q ss_pred             ccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069        282 NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIY  361 (461)
Q Consensus       282 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (461)
                      +.+..++|.+.+++|.+.++.++..+...+...++.++.|+++||+++|+.+  ..+.++.++..++..+.++.+.+++.
T Consensus        36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~  113 (455)
T TIGR00892        36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV--IAGGLLASLGMILASFSSNVIELYLT  113 (455)
T ss_pred             cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH--HhhHHHHHHHHHHHHHhhhHHHHHHH
Confidence            4566678888899999999999999999999999999999999998766543  35555666666777777787777654


Q ss_pred             -HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        362 -AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       362 -~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                       .++.|++.+...+....++.++++ ++|+++.|+.+....+|..++|.+.|.+.+.. +|++.|++.+++.+++.+..+
T Consensus       114 ~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~~~v~~~  191 (455)
T TIGR00892       114 AGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLHCCVCGA  191 (455)
T ss_pred             HHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHH
Confidence             477898888766666777888886 78999999999999999999999999999987 499999999988776665554


Q ss_pred             HHH
Q psy15069        441 VIP  443 (461)
Q Consensus       441 ~~~  443 (461)
                      +.+
T Consensus       192 ~~~  194 (455)
T TIGR00892       192 LMR  194 (455)
T ss_pred             HhC
Confidence            443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.44  E-value=8.8e-13  Score=130.35  Aligned_cols=170  Identities=15%  Similarity=0.135  Sum_probs=132.4

Q ss_pred             HHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC-----CcchhHHHHHHHHHHHHH
Q psy15069        271 TISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRP-----CVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~  345 (461)
                      ...++.+..........+|.|+++.|+|.+++|++......  .+.++++|+++||+     |+||+++. .+.+..+++
T Consensus         5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~-~~~~~~~l~   81 (402)
T PRK11902          5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLL-LTQVGLAAS   81 (402)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHH-HHHHHHHHH
Confidence            44566677777778889999999999999999998666554  68999999999998     55554443 444444444


Q ss_pred             HHHhhhh---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069        346 TVICAFC---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS  422 (461)
Q Consensus       346 ~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~  422 (461)
                      ...+.+.   .+.+.+.+..++.+++.+...+...+++.|++|+++|+++.++......+|..+++.+.+.+.+...+|+
T Consensus        82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~  161 (402)
T PRK11902         82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG  161 (402)
T ss_pred             HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence            4444444   3466666666777888888899999999999999999999999999999999999999999988644699


Q ss_pred             HHHHHHhHHHHHHHHHHHHHH
Q psy15069        423 PAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       423 ~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      ..|++.+++.++..+..+..+
T Consensus       162 ~~f~i~a~~~l~~~l~~~~~~  182 (402)
T PRK11902        162 NTYLLMAGLMLAGALTTLWAP  182 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC
Confidence            999998887776655444443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.44  E-value=5e-13  Score=131.18  Aligned_cols=160  Identities=13%  Similarity=0.099  Sum_probs=122.8

Q ss_pred             HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhH--HHHHHHHHHHHHHHHhhh
Q psy15069        274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLY--IYNGCLAICGAATVICAF  351 (461)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~--~~~~~~~~~~~~~~~~~~  351 (461)
                      +++...+...+.+++|.|+++.|.|..++|++.+...+...++.++.|++.||+++++..  .......+  ........
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~   90 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFG   90 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHh
Confidence            555566677888999999999999999999999999999999999999999997653211  11111111  12222233


Q ss_pred             hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHH
Q psy15069        352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA  431 (461)
Q Consensus       352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~  431 (461)
                      .++.|.+++..++.|++.+...+...++..+.  .++++++++.......+|..+||.++|++.++.| |+..|++.++.
T Consensus        91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~~~  167 (382)
T PRK11128         91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILTAG  167 (382)
T ss_pred             cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHHHH
Confidence            56788888888888988888888777776665  3567889999999999999999999999999875 99999887765


Q ss_pred             HHHHHHH
Q psy15069        432 IFVSGVM  438 (461)
Q Consensus       432 ~l~~~~~  438 (461)
                      .++..+.
T Consensus       168 ~~~~~~~  174 (382)
T PRK11128        168 VASMLLG  174 (382)
T ss_pred             HHHHHHH
Confidence            5554443

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.43  E-value=2.1e-12  Score=125.10  Aligned_cols=161  Identities=9%  Similarity=0.018  Sum_probs=133.7

Q ss_pred             cchhhHhhHHHHhCCCchh-hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069        283 VPYVYIVKLAEQRGVTRSN-ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIY  361 (461)
Q Consensus       283 ~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (461)
                      ......|.+.+++|++.++ .+.+.+.+..++.+..++.|+++||+|.|+  ++..+++..++..++.+++++.+.+.+.
T Consensus        44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~--vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~  121 (511)
T TIGR00806        44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP--VLVLQALSFVCVWLLLLLGTSVWHMQLM  121 (511)
T ss_pred             hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444556555899999999 999999999999999999999999965554  4556777888888888889999999999


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC--CchHHHHHHhHHHHHHHHHH
Q psy15069        362 AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL--SYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       362 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g--~~~~~f~~~~~~~l~~~~~~  439 (461)
                      .+++|++.++.. ....++.+++|+++|+++.|+.+....+|.++++++++++. ..|  +|....++......++.+..
T Consensus       122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a  199 (511)
T TIGR00806       122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLA  199 (511)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHH
Confidence            999999999998 88899999999999999999999999999999999999844 444  23445555566666777777


Q ss_pred             HHHHHhhH
Q psy15069        440 FVIPSLQS  447 (461)
Q Consensus       440 ~~~~~~~~  447 (461)
                      +++|..+|
T Consensus       200 ~~LP~~~~  207 (511)
T TIGR00806       200 LFLKRPKR  207 (511)
T ss_pred             HhCCCCch
Confidence            77775544

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.43  E-value=1.3e-12  Score=128.84  Aligned_cols=175  Identities=14%  Similarity=0.214  Sum_probs=128.6

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  342 (461)
                      ||.+|.+...+++.+.+...+.+++|.|+ +++|+++.+.+++.+...++..+++++.|+++||+|+|+..+........
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~   80 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV   80 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence            57789999999999999999999999998 56899999999999999999999999999999998766655432222111


Q ss_pred             H-HHHHHhhhhh-----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069        343 G-AATVICAFCY-----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       343 ~-~~~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~  416 (461)
                      + .......+.+     ..+...+..++.|++.+...+....+..+..+  +++..+|......++|..+||.++|.+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~  158 (396)
T TIGR00882        81 LFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS  158 (396)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc
Confidence            1 1111111111     12223444566777777777777666666433  34567788888889999999999998877


Q ss_pred             ccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        417 STLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       417 ~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      .  +|+..|++.+++.++..+..+..
T Consensus       159 ~--~~~~~f~~~~~~~~~~~~~~~~~  182 (396)
T TIGR00882       159 I--DPQIVFWLGSGFALILMLLLMFA  182 (396)
T ss_pred             c--CchHHHHHHHHHHHHHHHHHHHh
Confidence            5  59999999888877776655543

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.43  E-value=2.2e-12  Score=127.13  Aligned_cols=175  Identities=17%  Similarity=0.151  Sum_probs=128.4

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGA-ANMVSRVILGYISDRPCVNRLYIYNGCLAI  341 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~  341 (461)
                      |.+.+.+++..++...+...+.+.+|.++ +++|.+.++.|++.+...+ +.+++.+.+++ .||+++||..+. .+.+.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~-~~~~~   91 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIV-FCCLL   91 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHH-HHHHH
Confidence            55678888888988999888899999988 7889999999999876655 55555555666 999887665443 23334


Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccch--hHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069        342 CGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRL--TNAFGLLLLFQGIASLVGPPIAGFLYDSTL  419 (461)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g  419 (461)
                      .++...+..+.++++.+.+...+.+...+...|....+..+..++++|  +...++.+....+|.++||++++.+.++.|
T Consensus        92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g  171 (393)
T PRK15011         92 GVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS  171 (393)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC
Confidence            444455556677777765555555555556677777777777665544  334578888899999999999999999874


Q ss_pred             CchHHHHHHhHHHHHHHHHHHH
Q psy15069        420 SYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       420 ~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                       |+..|++.++..++.++..+.
T Consensus       172 -w~~~f~~~~~~~~~~~~~~~~  192 (393)
T PRK15011        172 -FTVMYLSAAVAFIVCGVMVWL  192 (393)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHh
Confidence             999999988877766655443

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=99.42  E-value=4.5e-11  Score=114.45  Aligned_cols=360  Identities=13%  Similarity=0.063  Sum_probs=232.8

Q ss_pred             eehHHHHhH-hcCCCccHH-HHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069          9 ILFIEFTKV-FQEGDGVTS-WIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG   86 (461)
Q Consensus         9 ~~~~~~~~~-~~~~~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l   86 (461)
                      .+.|++.+. .|++..++. -++-+..=.+....++...+.|..+.|++++++.+...+...+.-+.++++.+-+. -+.
T Consensus        25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~-q~~  103 (412)
T PF01770_consen   25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLM-QFF  103 (412)
T ss_pred             cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHH-HHH
Confidence            344555554 677777754 56666677777888899999999999999999999999999999999999999885 688


Q ss_pred             ccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHhhcc
Q psy15069         87 TGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGW--KITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        87 ~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw--~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      .|++.+. .++-.+++-... +++-.++.+...+..-+|-+++..++..++..-+.  +....+.-+...+..++ .+++
T Consensus       104 yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~-~~fL  181 (412)
T PF01770_consen  104 YGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLI-ALFL  181 (412)
T ss_pred             HHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHc
Confidence            9988776 333334444444 57778899999999999999999999988874443  33333332222233333 3444


Q ss_pred             cCCCCCC-CCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069        164 PLEEQPV-EEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC  242 (461)
Q Consensus       164 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (461)
                      |.+++.. .++...+...     .++.+.                        ++.++.++    ++....++++.    
T Consensus       182 P~~~~S~~f~r~~~~~~~-----~~~~~~------------------------~~~~~~~~----~~~~~~~~~~~----  224 (412)
T PF01770_consen  182 PMPKRSLFFHRKPPAEQD-----ANESES------------------------DKMNESPE----SSSSTEKSPST----  224 (412)
T ss_pred             CCCCcccceeccCccccc-----cccccc------------------------cccccccc----cccccccCccc----
Confidence            5443222 1111100000     000000                        00000000    00000000000    


Q ss_pred             ccCCchhhhhHhhhh--ccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh---CCCchhhHHHHHHHhhhhhhhh
Q psy15069        243 LNLSDDTKQTLREML--DMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR---GVTRSNASSLISIVGAANMVSR  317 (461)
Q Consensus       243 ~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~g~  317 (461)
                        .....+...+.+.  .++..++|.++...+-..+...+++.+..|.....++.   +-...--|.+-+...+.+.++.
T Consensus       225 --~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~a  302 (412)
T PF01770_consen  225 --ESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAA  302 (412)
T ss_pred             --ccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHH
Confidence              0011111111111  12457888888888888888888888888887777666   3334445677778888888899


Q ss_pred             hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069        318 VILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL  397 (461)
Q Consensus       318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  397 (461)
                      +..|++..++.+-....+....++.+.+++++.+.++.|..++..++++..+....+....-++.....+..|...|++.
T Consensus       303 l~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNt  382 (412)
T PF01770_consen  303 LLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINT  382 (412)
T ss_pred             HHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHH
Confidence            99999966644444556566666777778888889999999999999998888888888888888888899999999988


Q ss_pred             HHHHhhhhhccce
Q psy15069        398 LFQGIASLVGPPI  410 (461)
Q Consensus       398 ~~~~~g~~~gp~i  410 (461)
                      +...+-..+-..+
T Consensus       383 f~Al~LQtilT~i  395 (412)
T PF01770_consen  383 FVALVLQTILTLI  395 (412)
T ss_pred             HHHHHHHHheEEE
Confidence            8766655444433

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=99.42  E-value=8.8e-12  Score=116.08  Aligned_cols=236  Identities=14%  Similarity=0.122  Sum_probs=162.5

Q ss_pred             HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccc
Q psy15069         13 EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFG   92 (461)
Q Consensus        13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~   92 (461)
                      .+-+++|.+..+++.++........+.+++.|.+.||+|||+..++-+++.+++++.. ..++++.+++. |++.|++.+
T Consensus        59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~~~~~L~~G-RvlgGiaTS  136 (354)
T PF05631_consen   59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSSNYPVLLLG-RVLGGIATS  136 (354)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hccccHHHHHH-HHHHHHHHH
Confidence            3456799999999999999999999999999999999999999999999999999754 45889999986 999999998


Q ss_pred             ccchhHHHH-HHhhhhc-----cchhhhhhhc-cchhhhHHHHhHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHhhcc
Q psy15069         93 LIYLPAIVS-VTCYFER-----LRSLATGIAV-CGSGLGTIIFAPIIDYTVREYGW--KITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        93 ~~~~~~~~~-~~~~f~~-----~rg~a~gi~~-~~~~lg~~i~~~l~~~l~~~~gw--~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      ..+.+--++ +.|+.++     ..+.-.+... .++++-.++...++..+.+..|.  ..+|....++.++..++....+
T Consensus       137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W  216 (354)
T PF05631_consen  137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTW  216 (354)
T ss_pred             HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcc
Confidence            887766553 3444311     1222233233 34556667777888888877665  7788877777666655544333


Q ss_pred             cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069        164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (461)
                      ++...+.  .++                                                          .+.       
T Consensus       217 ~ENyg~~--~~~----------------------------------------------------------~~~-------  229 (354)
T PF05631_consen  217 PENYGDT--SSS----------------------------------------------------------SSL-------  229 (354)
T ss_pred             cccCCCc--ccc----------------------------------------------------------cch-------
Confidence            3211000  000                                                          000       


Q ss_pred             cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchh-hHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069        244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYV-YIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGY  322 (461)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~  322 (461)
                        .++.++..+     .+.+||+++.+.+...+.....|.+.. |.|..- ..+ ..-..|++++.+..+.++|+.+..+
T Consensus       230 --~~~~~~a~~-----~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~~~-~~~P~GlIFssFM~a~MlGS~lf~~  300 (354)
T PF05631_consen  230 --SGSFREAWR-----AILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-PDD-EELPLGLIFSSFMVAMMLGSSLFSR  300 (354)
T ss_pred             --HHHHHHHHH-----HHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-CCC-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence              011112222     356789999888888777777766554 566554 111 2244889999999999999999987


Q ss_pred             ccCC
Q psy15069        323 ISDR  326 (461)
Q Consensus       323 l~dr  326 (461)
                      +..+
T Consensus       301 l~s~  304 (354)
T PF05631_consen  301 LLSK  304 (354)
T ss_pred             HHhC
Confidence            7665

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.41  E-value=3.4e-12  Score=128.59  Aligned_cols=182  Identities=19%  Similarity=0.174  Sum_probs=147.9

Q ss_pred             ccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069        260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL  339 (461)
Q Consensus       260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~  339 (461)
                      ..+|+|.|..++++.++.+++........+-++.+..-|+...+++.....+..++.++++|.++||+++||.++..-..
T Consensus         5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~   84 (524)
T PF05977_consen    5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLL   84 (524)
T ss_pred             ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence            45899999999999999999998888888888877788899999999999999999999999999998666654432222


Q ss_pred             HHH-HHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069        340 AIC-GAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       340 ~~~-~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~  416 (461)
                      ... .+.+.++..  ..+.|.+++..++.|++.+...|...+++.+++|+++...+.++.+...++..++||.++|.++.
T Consensus        85 ~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva  164 (524)
T PF05977_consen   85 RALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVA  164 (524)
T ss_pred             HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence            111 111111112  23678888899999999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        417 STLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       417 ~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      ..| ....|.+.++..++..+.....
T Consensus       165 ~~G-~~~~f~inalsfl~~i~~l~~~  189 (524)
T PF05977_consen  165 FFG-AAAAFLINALSFLISILALLRW  189 (524)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence            875 7788888888777665544443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.41  E-value=1.5e-12  Score=130.62  Aligned_cols=153  Identities=14%  Similarity=0.085  Sum_probs=115.2

Q ss_pred             cchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh----hhHHHH
Q psy15069        283 VPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC----YNYVEL  358 (461)
Q Consensus       283 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  358 (461)
                      .+...+|.+.++ |++..+.++..+...++..+++++.|+++||+|+|+..  ..+.++.++..++..+.    .+.+.+
T Consensus        47 ~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l--~~~~~~~~i~~~~~~~~~~~~~~~~~~  123 (452)
T PRK11273         47 NFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL--PAGLILAAAVMLFMGFVPWATSSIAVM  123 (452)
T ss_pred             HHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH--HHHHHHHHHHHHHHHhhhcccccHHHH
Confidence            344566765566 99999999999999999999999999999998766543  34555555555555443    356677


Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhh-ccceeeeeecccCCchHHHHHHhHHHHHHHH
Q psy15069        359 AIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLV-GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV  437 (461)
Q Consensus       359 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~  437 (461)
                      ++..++.|++.+...+.....+.+++|+++|++++|+.+....+|+.+ +|.+...+.. ..+|+..|++.+++.++..+
T Consensus       124 ~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~-~~gw~~~f~i~~~~~~~~~~  202 (452)
T PRK11273        124 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW-FNDWHAALYMPAFAAILVAL  202 (452)
T ss_pred             HHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHH
Confidence            777889999988888877778899999999999999999999988754 4543322322 23699999998877666554


Q ss_pred             HH
Q psy15069        438 ML  439 (461)
Q Consensus       438 ~~  439 (461)
                      +.
T Consensus       203 l~  204 (452)
T PRK11273        203 FA  204 (452)
T ss_pred             HH
Confidence            43

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.39  E-value=3.6e-12  Score=128.95  Aligned_cols=179  Identities=16%  Similarity=0.140  Sum_probs=140.4

Q ss_pred             ccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC-----CcchhHHHH
Q psy15069        262 LRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRP-----CVNRLYIYN  336 (461)
Q Consensus       262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~~~~  336 (461)
                      .++|+.+.+++.++.+..........+|.++++.|.+.++.+.. +...... ++++++|+++||+     |+||.++. 
T Consensus         9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll-   85 (491)
T PRK11010          9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLL-   85 (491)
T ss_pred             HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHH-
Confidence            45667777777778888888888889999999999999999986 3333333 5899999999998     76665543 


Q ss_pred             HHHHHHHHHHHHhhhh---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee
Q psy15069        337 GCLAICGAATVICAFC---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF  413 (461)
Q Consensus       337 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~  413 (461)
                      .+.+..+++...+.+.   ++.+.+.+..++.+++.+...+...++..|++|+++|+++.++......+|..+++.+.++
T Consensus        86 ~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~  165 (491)
T PRK11010         86 ATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALW  165 (491)
T ss_pred             HHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344444444444333   3677777788889999999999999999999999999999999999999999999999999


Q ss_pred             eecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        414 LYDSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       414 l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      +.+...+|+..|++.+++.++..+..+..+
T Consensus       166 l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~  195 (491)
T PRK11010        166 LADRYLGWQGMYWLMAALLIPCIIATLLAP  195 (491)
T ss_pred             HHhcccCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            998434699999999888777766555443

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.39  E-value=2.1e-12  Score=130.18  Aligned_cols=165  Identities=15%  Similarity=0.057  Sum_probs=125.9

Q ss_pred             HHhhccccchhhHhhHHHHhCCC--------chhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069        276 FTSIGFNVPYVYIVKLAEQRGVT--------RSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV  347 (461)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~g~s--------~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  347 (461)
                      +...........+|....+.+.+        ..+.+++.+.+.++..+++++.|+++||+|+|+.++  .+.++..++.+
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~--~~~~~~~~~~~  116 (481)
T TIGR00879        39 MFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL--IIALLFVIGAI  116 (481)
T ss_pred             hcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH--HHHHHHHHHHH
Confidence            33344444555666666666665        899999999999999999999999999977655443  34444444444


Q ss_pred             Hhhh---hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee---eeeecccCCc
Q psy15069        348 ICAF---CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA---GFLYDSTLSY  421 (461)
Q Consensus       348 ~~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~---g~l~~~~g~~  421 (461)
                      +..+   ..+.+.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.   +.+.+.. +|
T Consensus       117 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~w  195 (481)
T TIGR00879       117 LMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL-GW  195 (481)
T ss_pred             HHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc-cH
Confidence            4433   234557888899999999999999999999999999999999999999999999999998   6665654 59


Q ss_pred             hHHHHHHhHHHHHHHHHHHHHH
Q psy15069        422 SPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       422 ~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      ++.|++.+...++..+..++++
T Consensus       196 ~~~f~~~~~~~~~~~~~~~~l~  217 (481)
T TIGR00879       196 RIPLGLQLIPAGLLFLGLFFLP  217 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC
Confidence            9999997666666555554443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00889 2A0110 nucleoside transporter

Probab=99.38  E-value=2.5e-12  Score=127.56  Aligned_cols=157  Identities=13%  Similarity=0.170  Sum_probs=128.4

Q ss_pred             eehHHHHhHhcCCC--------ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc-c---h
Q psy15069          9 ILFIEFTKVFQEGD--------GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK-N---V   76 (461)
Q Consensus         9 ~~~~~~~~~~~~~~--------~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~-~---~   76 (461)
                      .+.|.+.++.|.+.        .+.+.+.++..+...++.++.|++.||+|+|+++..+.++.+++..+..... +   +
T Consensus       229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~  308 (418)
T TIGR00889       229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY  308 (418)
T ss_pred             HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence            44566777777553        6679999999999999999999999999999999999999999877666532 2   3


Q ss_pred             hhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhc-cchhhhHHHHhHHHHHHHHh------hchhHHHHHH
Q psy15069         77 ITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAV-CGSGLGTIIFAPIIDYTVRE------YGWKITLLVL  148 (461)
Q Consensus        77 ~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~-~~~~lg~~i~~~l~~~l~~~------~gw~~~f~i~  148 (461)
                      +.+++ .+++.|++.+...+.....+.+++| ++|++++|+.+ ...++|.+++|++++.+.+.      +||+..|.+.
T Consensus       309 ~~l~l-~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~  387 (418)
T TIGR00889       309 ALLFL-SMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF  387 (418)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence            44454 3688999988888888888899996 78999999997 67899999999999999987      4699999999


Q ss_pred             HHHHHHHHHHHhhcccCC
Q psy15069        149 SVTVLSAVLFGILLRPLE  166 (461)
Q Consensus       149 ~~~~l~~~i~~~~~~~~~  166 (461)
                      +++.++..++.+++.+++
T Consensus       388 ~~~~~i~~~l~~~~~~~~  405 (418)
T TIGR00889       388 AGYIAILAVLFMIFFKYS  405 (418)
T ss_pred             HHHHHHHHHHHHHHhCCc
Confidence            988888777766665543

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.37  E-value=5.2e-12  Score=124.81  Aligned_cols=172  Identities=12%  Similarity=0.101  Sum_probs=138.3

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  345 (461)
                      .++.+++.++...+........+|.+.+++|++..+.+++.+...++.+++++..|++.||+|+|+..+  .++++.+++
T Consensus         4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~--~g~~l~~~g   81 (410)
T TIGR00885         4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGIL--LGLFLYALG   81 (410)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH--HHHHHHHHH
Confidence            356667777777777777778889999999999999999999999999999999999999987666554  444455555


Q ss_pred             HHHhh---hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc----
Q psy15069        346 TVICA---FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST----  418 (461)
Q Consensus       346 ~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~----  418 (461)
                      .+++.   ..++++.+.+..++.|++.+...+....++.+..|++++++..++.+...++|..+||.+.+.+....    
T Consensus        82 ~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~  161 (410)
T TIGR00885        82 AFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQ  161 (410)
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            44432   23578888888999999999999998889999999999999999999999999999999988774221    


Q ss_pred             ---------------------CCchHHHHHHhHHHHHHHHHH
Q psy15069        419 ---------------------LSYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       419 ---------------------g~~~~~f~~~~~~~l~~~~~~  439 (461)
                                           .+|+.+|++.+++.++..++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~  203 (410)
T TIGR00885       162 SQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI  203 (410)
T ss_pred             hhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 248899988888766655444

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.37  E-value=5.8e-12  Score=127.52  Aligned_cols=175  Identities=12%  Similarity=0.073  Sum_probs=128.3

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHHHHh--------CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLAEQR--------GVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL  339 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~  339 (461)
                      +...++.+........+....|.+.+++        +.+..+.+++.+.+.++.+++.+++|+++||+|+|+.++.  +.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~--~~   92 (479)
T PRK10077         15 LVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI--AA   92 (479)
T ss_pred             HHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH--HH
Confidence            3344444444455555555556555554        8889999999999999999999999999999877665543  33


Q ss_pred             HHHHHHHHHhhh------------hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhc
Q psy15069        340 AICGAATVICAF------------CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVG  407 (461)
Q Consensus       340 ~~~~~~~~~~~~------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g  407 (461)
                      ++..++.+...+            .+..+.+++.+++.|++.|...+...+++.|++|+++|+++.++......+|..++
T Consensus        93 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~  172 (479)
T PRK10077         93 VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV  172 (479)
T ss_pred             HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence            333333333322            12245667889999999999999999999999999999999999999999998888


Q ss_pred             cceeeeee--------cccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069        408 PPIAGFLY--------DSTLSYSPAFFLAGGAIFVSGVMLFVIPSL  445 (461)
Q Consensus       408 p~i~g~l~--------~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~  445 (461)
                      +.+++.+.        +.. +|++.|++.++..++..+..+++++.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~~~~l~~s  217 (479)
T PRK10077        173 YFVNYFIARSGDASWLNTD-GWRYMFASEAIPALLFLMLLYFVPET  217 (479)
T ss_pred             HHHHHHHhccCcccccccC-ChHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            76654332        233 59999998887777766656555543

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.37  E-value=8.1e-12  Score=123.01  Aligned_cols=176  Identities=11%  Similarity=0.009  Sum_probs=127.3

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  342 (461)
                      +|.+++..++.+......+.+....+.+-+ ++|+|.+|.+++.++..+++.++++..|++.||+|.|+...  .+.++.
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~--~~~ll~  110 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTV--FSTAIL  110 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH--HHHHHH
Confidence            456666666666655655566666666654 79999999999999999999999999999999987666544  445555


Q ss_pred             HHHHHHhhhh-----hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee----
Q psy15069        343 GAATVICAFC-----YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF----  413 (461)
Q Consensus       343 ~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~----  413 (461)
                      ++..+...+.     ++++.+++..++.|++ +..++.....+.+++|+++||++.|+....+++|..+++++...    
T Consensus       111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~  189 (462)
T PRK15034        111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV  189 (462)
T ss_pred             HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            6666666655     7899999999999997 77888888899999999999999999966666666544443322    


Q ss_pred             -eecccC------------CchHHHHHHhHHHHHHHHHHHHH
Q psy15069        414 -LYDSTL------------SYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       414 -l~~~~g------------~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                       +.+..|            +|+.++++...+.++..+..++.
T Consensus       190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~  231 (462)
T PRK15034        190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG  231 (462)
T ss_pred             HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             112111            25666666666666665555443

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.36  E-value=1.1e-11  Score=125.86  Aligned_cols=169  Identities=11%  Similarity=0.045  Sum_probs=124.5

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchh-hHH-----HHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSN-ASS-----LISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA  340 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~-----~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~  340 (461)
                      ++...++.++..+.+..+....|...+++..+.++ ..+     ..+...++..+|.+++|+++||+|+|+.+  ..+++
T Consensus        18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l--~~~~~   95 (490)
T PRK10642         18 ITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL--AITIV   95 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH--HHHHH
Confidence            44556777777777777666777666777533322 122     24566688899999999999997766554  46677


Q ss_pred             HHHHHHHHhhhhhhHHH--------HHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceee
Q psy15069        341 ICGAATVICAFCYNYVE--------LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG  412 (461)
Q Consensus       341 ~~~~~~~~~~~~~~~~~--------~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g  412 (461)
                      +.+++.++..+.++++.        +++.+++.|++.|...+....++.|++|+++|+...++......+|..+|+.+..
T Consensus        96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~  175 (490)
T PRK10642         96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV  175 (490)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            77788888888887653        6788899999999999999999999999999999999998888888777775543


Q ss_pred             eee--------cccCCchHHHHHHhHHHHHHHHH
Q psy15069        413 FLY--------DSTLSYSPAFFLAGGAIFVSGVM  438 (461)
Q Consensus       413 ~l~--------~~~g~~~~~f~~~~~~~l~~~~~  438 (461)
                      .+.        +.. +|++.|++.+.+.+++.++
T Consensus       176 ~~~~~~~~~~~~~~-gWR~~f~i~~~~~l~~~~~  208 (490)
T PRK10642        176 LISTIVGEANFLDW-GWRIPFFIALPLGIIGLYL  208 (490)
T ss_pred             HHHHhcCHHHhcCc-cHHHHHHHHHHHHHHHHHH
Confidence            332        233 5999999876655544433

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.34  E-value=1.1e-11  Score=123.81  Aligned_cols=165  Identities=12%  Similarity=0.015  Sum_probs=118.1

Q ss_pred             HHHHHHHHHhhccccchhhHhhHHHHhC---CCchhhH---HHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069        269 LFTISNIFTSIGFNVPYVYIVKLAEQRG---VTRSNAS---SLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~---~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  342 (461)
                      ...++.++.......+....|.+.++++   .+..+.+   .+++...++..+|++++|+++||+|+|+.+  ..++++.
T Consensus        26 ~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l--~~~~~~~  103 (432)
T PRK10406         26 GASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM--LISVCMM  103 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH--HHHHHHH
Confidence            3445566667776666666666667764   4444433   344444555669999999999997766544  4566666


Q ss_pred             HHHHHHhhhhhhH--------HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee
Q psy15069        343 GAATVICAFCYNY--------VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL  414 (461)
Q Consensus       343 ~~~~~~~~~~~~~--------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l  414 (461)
                      ++..++..+.+++        ..+++.+++.|++.|...+...+++.|.+|+++|+.+.++.......|..+++.+...+
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~  183 (432)
T PRK10406        104 CFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVL  183 (432)
T ss_pred             HHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666666665554        35778899999999999999999999999999999999998888777777777654433


Q ss_pred             e--------cccCCchHHHHHHhHHHHHHH
Q psy15069        415 Y--------DSTLSYSPAFFLAGGAIFVSG  436 (461)
Q Consensus       415 ~--------~~~g~~~~~f~~~~~~~l~~~  436 (461)
                      .        +.. +|+..|++.++..++..
T Consensus       184 ~~~~~~~~~~~~-gWr~~F~i~~~~~ll~~  212 (432)
T PRK10406        184 QQTLEDAELREW-GWRIPFALGAVLAVVAL  212 (432)
T ss_pred             HHhCCHHHHhcc-chHHHHHHHHHHHHHHH
Confidence            2        133 59999988777665543

>KOG4332|consensus

Probab=99.33  E-value=1.1e-10  Score=103.01  Aligned_cols=342  Identities=13%  Similarity=0.129  Sum_probs=204.0

Q ss_pred             HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069         15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI   94 (461)
Q Consensus        15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~   94 (461)
                      -..++..++++|.++-+.....++.+.+.|.|+||.|||+..+.=++-..++++- -.++.+..+++. |++.|+..+..
T Consensus        64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVG-R~LGGiaTsLL  141 (454)
T KOG4332|consen   64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVG-RVLGGIATSLL  141 (454)
T ss_pred             ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeeh-hhhhhHHHHHH
Confidence            3457888999999999988889999999999999999999877766666666643 356788899986 99999998887


Q ss_pred             chhHHHHHHhhhhccchhhhhh--------hccchhhhHHHHhHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHhhcc-
Q psy15069         95 YLPAIVSVTCYFERLRSLATGI--------AVCGSGLGTIIFAPIIDYTVREYGW--KITLLVLSVTVLSAVLFGILLR-  163 (461)
Q Consensus        95 ~~~~~~~~~~~f~~~rg~a~gi--------~~~~~~lg~~i~~~l~~~l~~~~gw--~~~f~i~~~~~l~~~i~~~~~~-  163 (461)
                      +.+--++...-..++|++---+        ...+.++-.++....+..+.+.++.  -.+|-..  .+++.+-....++ 
T Consensus       142 FSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAA--acfLaigmAvil~~  219 (454)
T KOG4332|consen  142 FSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAA--ACFLAIGMAVILSS  219 (454)
T ss_pred             HHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHH--HHHHHHHHHHHHhh
Confidence            7666553333223445442222        1245666677777888888876644  3344333  3333322222221 


Q ss_pred             --cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        164 --PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       164 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                        ++...|.|                     ++.+                                             
T Consensus       220 W~ENygdps~---------------------~kdl---------------------------------------------  233 (454)
T KOG4332|consen  220 WSENYGDPSE---------------------NKDL---------------------------------------------  233 (454)
T ss_pred             hhhccCChhh---------------------hHHH---------------------------------------------
Confidence              11111110                     0000                                             


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHH-HHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILF-TISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVI  319 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~  319 (461)
                          ..+.+...+     .+..++++.++ .+-..+....+..++.|.|..- ++.+..   -|.+++.+.++.++|+-+
T Consensus       234 ----ltqf~gaa~-----aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP---hGfiFatFMlASmLGSSl  301 (454)
T KOG4332|consen  234 ----LTQFKGAAR-----AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSL  301 (454)
T ss_pred             ----HHHhhHhHH-----HHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC---chhHHHHHHHHHHHhhHH
Confidence                000111111     23445555443 3334444444444556666654 344433   567888899999999999


Q ss_pred             hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh-------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069        320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCY-------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA  392 (461)
Q Consensus       320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (461)
                      ..++..|-..+-.....+.+++....+.+...+.       ++..-.+..+++-.+.|..+|...-+-.+..|++.|++.
T Consensus       302 a~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearsti  381 (454)
T KOG4332|consen  302 ASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTI  381 (454)
T ss_pred             HHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhh
Confidence            9999887433333334444444443333222211       334446677788889999999999999999999999988


Q ss_pred             HHHHHHHHHhhhhhccceeeeeeccc-CCchHHHHHHhHHHHHHHHHHH
Q psy15069        393 FGLLLLFQGIASLVGPPIAGFLYDST-LSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       393 ~g~~~~~~~~g~~~gp~i~g~l~~~~-g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      +.+...--++...++-..-  -.|.. -.-+..|-++.....++.+...
T Consensus       382 mNfFRvPLnifvClvLynl--h~~~~p~~tr~mf~icS~~~~~a~i~~~  428 (454)
T KOG4332|consen  382 MNFFRVPLNIFVCLVLYNL--HVDAFPTTTRNMFGICSAFLFVASILQR  428 (454)
T ss_pred             hhheechhhHhhhhhheec--ccccCccccchhhhhhHHHHHHHHHHHH
Confidence            8876665555444432110  01111 1245667777766666655433

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.33  E-value=1e-11  Score=126.33  Aligned_cols=177  Identities=14%  Similarity=0.152  Sum_probs=128.4

Q ss_pred             HHHHHHHHHhhccccchhhHhhHHHH-----hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069        269 LFTISNIFTSIGFNVPYVYIVKLAEQ-----RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG  343 (461)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~  343 (461)
                      +..++.++.......+....|.+-.+     ...+..+.+++.+...++.+++.++.|+++||+|+|+...  .++++..
T Consensus        20 ~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~--~~~~~~~   97 (502)
T TIGR00887        20 IAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG--MELIIMI   97 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH--HHHHHHH
Confidence            34444555555555555555554432     2345567788999999999999999999999976655443  4444555


Q ss_pred             HHHHHhhhhhh------HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc
Q psy15069        344 AATVICAFCYN------YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS  417 (461)
Q Consensus       344 ~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~  417 (461)
                      ++.++..+.++      .+.+++.+++.|++.+...+..+.++.|.+|+++|+++.++.+....+|..+++.+...+...
T Consensus        98 v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~  177 (502)
T TIGR00887        98 IATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAG  177 (502)
T ss_pred             HHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55554444443      567888999999999999999999999999999999999999999999999988886654320


Q ss_pred             ----------------------cCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069        418 ----------------------TLSYSPAFFLAGGAIFVSGVMLFVIPSLQS  447 (461)
Q Consensus       418 ----------------------~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~  447 (461)
                                            ..+|+..|.+.++..++..+..+.+|+..+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr  229 (502)
T TIGR00887       178 FKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPR  229 (502)
T ss_pred             hccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence                                  115999998777777666666556655443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.32  E-value=6.3e-12  Score=140.54  Aligned_cols=182  Identities=17%  Similarity=0.061  Sum_probs=129.0

Q ss_pred             cccchhHHHHHHHHHHHhhccccchhhHhh----HH-HHhCCC-chhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHH
Q psy15069        261 LLRDPIFILFTISNIFTSIGFNVPYVYIVK----LA-EQRGVT-RSNASSLISIVGAANMVSRVILGYISDRPCVNRLYI  334 (461)
Q Consensus       261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~g~s-~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~  334 (461)
                      +++++.+..+++..++..++.+.....++.    .+ ++.+.+ ....++..+++.+..++.++++|+++||+++|+.+.
T Consensus         7 l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~   86 (1140)
T PRK06814          7 LMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAK   86 (1140)
T ss_pred             hhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHH
Confidence            567777777777766666654433222221    12 222222 245777888899999999999999999987766432


Q ss_pred             HH-HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee
Q psy15069        335 YN-GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF  413 (461)
Q Consensus       335 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~  413 (461)
                      .. .+.++.....+.....++++.++++.++.|++.++..|...+++.++++++++++++|+.++..++|.++||.++|+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~  166 (1140)
T PRK06814         87 ILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGL  166 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            21 11122222222222347899999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        414 LYDSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       414 l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      +.+.. +|+..|...++..+++.++.+.++
T Consensus       167 l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  195 (1140)
T PRK06814        167 ATISG-NFVILVALLMGIAVLGWLASLFIP  195 (1140)
T ss_pred             HHhcc-ccHHHHHHHHHHHHHHHHHHhhCC
Confidence            99976 588888555555555544444443

>TIGR00898 2A0119 cation transport protein

Probab=99.32  E-value=3.9e-12  Score=129.69  Aligned_cols=153  Identities=16%  Similarity=0.210  Sum_probs=129.8

Q ss_pred             hhHhhHHHHhCCC---chhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy15069        286 VYIVKLAEQRGVT---RSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYA  362 (461)
Q Consensus       286 ~~~~~~~~~~g~s---~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (461)
                      ...|.+.++++++   ..+.++..+.+.++.+++.++.|+++||+|+|+..  ..+.++.+++.++..+.++++.+++.+
T Consensus       110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~r  187 (505)
T TIGR00898       110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL--LLSTLVTAVSGVLTAFSPNYTVFLVFR  187 (505)
T ss_pred             cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH--HHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence            4566666889998   89999999999999999999999999997765544  356666677777777888999999999


Q ss_pred             HHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        363 GVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       363 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      ++.|++.+...+....++.|.+|+++|+.+.++......+|.+++|.+++.+.+    |++.+++.++..++..+..+++
T Consensus       188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~  263 (505)
T TIGR00898       188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFV  263 (505)
T ss_pred             HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999988765543    9999999888877777666655


Q ss_pred             HH
Q psy15069        443 PS  444 (461)
Q Consensus       443 ~~  444 (461)
                      ++
T Consensus       264 ~e  265 (505)
T TIGR00898       264 PE  265 (505)
T ss_pred             CC
Confidence            44

>TIGR00901 2A0125 AmpG-related permease

Probab=99.31  E-value=1.7e-11  Score=119.03  Aligned_cols=156  Identities=11%  Similarity=0.053  Sum_probs=118.9

Q ss_pred             cchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC-----CcchhHHHHHHHHHHHHHHHHhhhh---hh
Q psy15069        283 VPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRP-----CVNRLYIYNGCLAICGAATVICAFC---YN  354 (461)
Q Consensus       283 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~---~~  354 (461)
                      .....+|.++++.|+|.++.++..+. .+...+ ++++|++.||+     |+||.+++ .+.+..++......+.   .+
T Consensus         6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~-~~~~~~~~~~~~l~~~~~~~~   82 (356)
T TIGR00901         6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLV-LTQVLLLSLLLILSFLVPSTD   82 (356)
T ss_pred             hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHH-HHHHHHHHHHHHHHcCCcchh
Confidence            34557888889999999999998655 444444 89999999997     54444433 4444444444444444   35


Q ss_pred             HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC-------chHHHHH
Q psy15069        355 YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS-------YSPAFFL  427 (461)
Q Consensus       355 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~-------~~~~f~~  427 (461)
                      .+.+....++.+++.+...+...+++.|++|+++|+.+.++......+|..+++.+++.+.+..|.       |+..|++
T Consensus        83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i  162 (356)
T TIGR00901        83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW  162 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence            555666666778888888888899999999999999999999999999999999999999887652       9999999


Q ss_pred             HhHHHHHHHHHHHH
Q psy15069        428 AGGAIFVSGVMLFV  441 (461)
Q Consensus       428 ~~~~~l~~~~~~~~  441 (461)
                      .++..++..+..+.
T Consensus       163 ~ai~~l~~~~~~~~  176 (356)
T TIGR00901       163 TALLILPGLLVTLF  176 (356)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88877776655544

>TIGR00896 CynX cyanate transporter

Probab=99.31  E-value=1.3e-11  Score=119.87  Aligned_cols=152  Identities=13%  Similarity=0.015  Sum_probs=123.0

Q ss_pred             ccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHH
Q psy15069        280 GFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELA  359 (461)
Q Consensus       280 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (461)
                      .+..+...+|.+.+++|++..+.++..+...++..++.++.|+++||+++|+....  +.++..++.+.. ..++.+.++
T Consensus        15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~--~~~~~~~~~~~~-~~~~~~~l~   91 (355)
T TIGR00896        15 ALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAA--GLLLIAAGILIR-SAPGTALLF   91 (355)
T ss_pred             ccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHH--HHHHHHHHHHHH-HhccHHHHH
Confidence            34556778999999999999999999999999999999999999999877665443  444444444444 556778888


Q ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC-chHHHHHHhHHHHHH
Q psy15069        360 IYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS-YSPAFFLAGGAIFVS  435 (461)
Q Consensus       360 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~-~~~~f~~~~~~~l~~  435 (461)
                      +.+++.|++.+...+....++.|.+| ++|+++.++.+....+|..+++.+.+.+.+..+. |+..|...+++.++.
T Consensus        92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~  167 (355)
T TIGR00896        92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA  167 (355)
T ss_pred             HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence            88899999998877777788888886 6899999999999999999999999988877544 888887776654443

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK09952 shikimate transporter; Provisional

Probab=99.29  E-value=4.3e-11  Score=119.60  Aligned_cols=165  Identities=12%  Similarity=0.099  Sum_probs=120.7

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHH-HHh--CCCchhhHHHH-----HHHhhhhhhhhhhhhhccCCCCcchhHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLA-EQR--GVTRSNASSLI-----SIVGAANMVSRVILGYISDRPCVNRLYIYNG  337 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--g~s~~~~~~~~-----~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~  337 (461)
                      .++...++.++.......+....|.+. +++  +.++. .++..     +...++..+++++.|+++||+|+|+.+  ..
T Consensus        23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l--~~   99 (438)
T PRK09952         23 AALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML--ML   99 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH--HH
Confidence            345555666666666666555666555 444  66665 34443     233455678889999999997665544  45


Q ss_pred             HHHHHHHHHHHhhhhhhHH--------HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccc
Q psy15069        338 CLAICGAATVICAFCYNYV--------ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPP  409 (461)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~  409 (461)
                      ++++.+++.++..+.+++.        .+++.+++.|++.|...+....++.|.+|+++|+...+.......+|..+++.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~  179 (438)
T PRK09952        100 TVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTG  179 (438)
T ss_pred             HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            7777777777788888765        47778899999999999998999999999999999999999888888888876


Q ss_pred             eeeeeec--------ccCCchHHHHHHhHHHHH
Q psy15069        410 IAGFLYD--------STLSYSPAFFLAGGAIFV  434 (461)
Q Consensus       410 i~g~l~~--------~~g~~~~~f~~~~~~~l~  434 (461)
                      +.+.+..        .. +|+..|++.++..++
T Consensus       180 ~~~~l~~~~~~~~~~~~-gWr~~f~~~~~~~l~  211 (438)
T PRK09952        180 LVSLISMMTTDEQFLSW-GWRIPFLFSIVLVLI  211 (438)
T ss_pred             HHHHHHHhCCHHHhhcc-ChHHHHHHHHHHHHH
Confidence            6655442        23 599999887766544

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.29  E-value=1.7e-12  Score=134.52  Aligned_cols=170  Identities=11%  Similarity=0.125  Sum_probs=131.3

Q ss_pred             HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh
Q psy15069        274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY  353 (461)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (461)
                      .+........+...++.+.++++++..+.|++.+.+.+++.++.++.+++.||.+++|.+  ..++++.+++.+++.+.+
T Consensus        42 ~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i--~~g~ll~~lg~ll~alph  119 (633)
T TIGR00805        42 QLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI--GIGCAIMGLGSFLLSLPH  119 (633)
T ss_pred             HHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE--EecHHHHHHHHHHHhChH
Confidence            333333334455567777789999999999999999999999999999999997655543  345555555555444321


Q ss_pred             ---------------------------------------------------hHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy15069        354 ---------------------------------------------------NYVELAIYAGVFGAMIGAYVGLTSVILVD  382 (461)
Q Consensus       354 ---------------------------------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~  382 (461)
                                                                         .+..+++..++.|++.+..+++..+++.|
T Consensus       120 f~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d  199 (633)
T TIGR00805       120 FLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDD  199 (633)
T ss_pred             HhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhc
Confidence                                                               13456678999999999999999999999


Q ss_pred             hcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc---------------------CCchHHHHHHhHHHHHHHHHHHH
Q psy15069        383 LLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST---------------------LSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       383 ~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~---------------------g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      .+|+++|+.+.|+.+....+|..+|+.++|++.+..                     |.|+..|++.+++.++.++.+++
T Consensus       200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~  279 (633)
T TIGR00805       200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF  279 (633)
T ss_pred             cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999887542                     23677788888887777666555


Q ss_pred             HHHh
Q psy15069        442 IPSL  445 (461)
Q Consensus       442 ~~~~  445 (461)
                      +++.
T Consensus       280 ~p~~  283 (633)
T TIGR00805       280 FPKA  283 (633)
T ss_pred             Cccc
Confidence            5543

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK10133 L-fucose transporter; Provisional

Probab=99.29  E-value=3.5e-11  Score=119.99  Aligned_cols=147  Identities=12%  Similarity=0.075  Sum_probs=120.1

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  345 (461)
                      .+..+.+.++...+........+|.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|+|+..+  .+..+.+++
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~--~g~~~~~~~  104 (438)
T PRK10133         27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGII--TGLFLYALG  104 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHHHHH
Confidence            345566666777777777888899988999999999999999999999999999999999977666554  455555555


Q ss_pred             HHHh---hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee
Q psy15069        346 TVIC---AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL  414 (461)
Q Consensus       346 ~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l  414 (461)
                      .+++   .+.++++.+.+.+++.|++.+...+....++.+..|++++....++.+....+|..+||.+++.+
T Consensus       105 ~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l  176 (438)
T PRK10133        105 AALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL  176 (438)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4443   35678888999999999999999999999888887766666689999999999999999887654

>PRK15075 citrate-proton symporter; Provisional

Probab=99.28  E-value=4.8e-11  Score=119.21  Aligned_cols=162  Identities=18%  Similarity=0.146  Sum_probs=122.9

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHH-HHH-----hhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLI-SIV-----GAANMVSRVILGYISDRPCVNRLYIYNGCL  339 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~-~~~-----~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~  339 (461)
                      .....+++.++.+.....+....|.+.++++.+..+.+.+. +..     .+...++.++.|+++||+|+|+.++  .+.
T Consensus        16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~--~~~   93 (434)
T PRK15075         16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI--VTL   93 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH--HHH
Confidence            34557778888888888888999988899998877755432 222     2223468899999999977665544  556


Q ss_pred             HHHHHHHHHhhhhhhHH--------HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069        340 AICGAATVICAFCYNYV--------ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA  411 (461)
Q Consensus       340 ~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~  411 (461)
                      ++.+++..+..+.++++        .+++.+++.|++.+...+....++.|++|+++|+++.++.+...++|..+++.++
T Consensus        94 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g  173 (434)
T PRK15075         94 SIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLG  173 (434)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            66667777777777765        3577789999999988888889999999999999999999988888877777766


Q ss_pred             eeee--------cccCCchHHHHHHhH
Q psy15069        412 GFLY--------DSTLSYSPAFFLAGG  430 (461)
Q Consensus       412 g~l~--------~~~g~~~~~f~~~~~  430 (461)
                      +.+.        +.. +|+..|++...
T Consensus       174 ~~l~~~~~~~~~~~~-gWr~~f~~~~~  199 (434)
T PRK15075        174 YLLNQWLSPAQMAEW-GWRIPFLIGCL  199 (434)
T ss_pred             HHHHHhCCHHHHhcc-chHHHHHHHHH
Confidence            6542        344 59999987543

>KOG2532|consensus

Probab=99.26  E-value=1.2e-11  Score=122.53  Aligned_cols=149  Identities=15%  Similarity=0.227  Sum_probs=131.5

Q ss_pred             HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhhhhh
Q psy15069        294 QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY--NYVELAIYAGVFGAMIGA  371 (461)
Q Consensus       294 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~  371 (461)
                      ++.+++.+-+++++.+..+.+++.+..|++.||+|.|+...  .+.++.++..++.+.+.  +.+.+++.+++.|++.|.
T Consensus        67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~--~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~  144 (466)
T KOG2532|consen   67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFF--ISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV  144 (466)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHH--HHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence            57889999999999999999999999999999977666544  56667777777777654  556778899999999999


Q ss_pred             HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        372 YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      .+|....+..++.|+++|++..++.....++|.+++-+++|.+.+...+|+.+|++.+++.++..++++.+..
T Consensus       145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~  217 (466)
T KOG2532|consen  145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS  217 (466)
T ss_pred             HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999998445999999999999999988877644

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.25  E-value=2.1e-11  Score=100.88  Aligned_cols=132  Identities=17%  Similarity=0.206  Sum_probs=107.7

Q ss_pred             HHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc
Q psy15069        307 SIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGL  386 (461)
Q Consensus       307 ~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~  386 (461)
                      +...++.++++++.|++.||+++|+...  .+.....+..+.....++.+...+..++.|++.+...+....++.|.+|+
T Consensus         5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   82 (141)
T TIGR00880         5 AGYALGQLIYSPLSGLLTDRFGRKPVLL--VGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP   82 (141)
T ss_pred             EeehhHHHHHHhhHHHHHhhcchhHHHH--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence            4456778899999999999976555443  44445555555566667888888888999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        387 DRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       387 ~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      ++|+++.++.+....+|..++|.+.+.+.+.. +|+..+++.+.+.+++.+..+.
T Consensus        83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  136 (141)
T TIGR00880        83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAF  136 (141)
T ss_pred             hhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999876 4888888888777766655543

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.25  E-value=5e-11  Score=133.62  Aligned_cols=157  Identities=17%  Similarity=0.172  Sum_probs=118.3

Q ss_pred             cccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCc--hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHH
Q psy15069        261 LLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTR--SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNG  337 (461)
Q Consensus       261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~--~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~  337 (461)
                      .++++.++.+++..++..+........+..++ .+++.+.  ...+++.+++.++.+++++++|+++||+|+|+.++...
T Consensus         5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~   84 (1146)
T PRK08633          5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK   84 (1146)
T ss_pred             hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence            46777787777777776665544444444343 5555543  34688888999999999999999999987665544322


Q ss_pred             HH-HHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069        338 CL-AICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       338 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~  416 (461)
                      .+ ++..+...+....++++.+++..++.|++.+...+...+++.|++|+++|++++|+......+|.++||.++|++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~  164 (1146)
T PRK08633         85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE  164 (1146)
T ss_pred             HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            21 11222222233446788888999999999999999999999999999999999999999999999999999999987


Q ss_pred             c
Q psy15069        417 S  417 (461)
Q Consensus       417 ~  417 (461)
                      .
T Consensus       165 ~  165 (1146)
T PRK08633        165 S  165 (1146)
T ss_pred             h
Confidence            6

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=99.24  E-value=1.8e-09  Score=103.53  Aligned_cols=324  Identities=14%  Similarity=0.065  Sum_probs=190.0

Q ss_pred             HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHh
Q psy15069         25 TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTC  104 (461)
Q Consensus        25 ~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~  104 (461)
                      ++.+.-+..+...+.-+++..+++|...+.=.....++..++.++.++++|++.=++. -++.+++.|..-..-.. ..+
T Consensus        61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~G-v~las~ssg~GE~tfL~-lt~  138 (402)
T PF02487_consen   61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLG-VVLASLSSGLGEVTFLS-LTH  138 (402)
T ss_pred             chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHH-HHHHhhhhhhhHHHHHH-HHH
Confidence            4556666777888888888899999987666777777888999999999998876664 36777777765444433 345


Q ss_pred             hhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcc
Q psy15069        105 YFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGW--KITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHL  182 (461)
Q Consensus       105 ~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw--~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  182 (461)
                      ++++   ...+-+.+|.+.++++|+..-..+.+ .|+  |.++++...+.++..+..++.+|.++..+...+.+.  +++
T Consensus       139 ~y~~---~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~--~~~  212 (402)
T PF02487_consen  139 FYGK---SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESES--EDE  212 (402)
T ss_pred             hcCc---cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCC--CCc
Confidence            5554   45788899999999999888877766 666  667777766665555444555544322111000000  000


Q ss_pred             cccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccc
Q psy15069        183 RIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELL  262 (461)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  262 (461)
                             .                              +++....    +.++++.+   ...+...+.+++..  ++++
T Consensus       213 -------~------------------------------~~~~~~~----~~~~~~~~---~~~~~~~~~k~~~~--k~Ll  246 (402)
T PF02487_consen  213 -------A------------------------------EDDLLES----ETSESKPD---SSSKLSFKEKLKRL--KPLL  246 (402)
T ss_pred             -------c------------------------------ccccccc----cccccccc---ccchhhHHHHHHHH--HHHH
Confidence                   0                              0000000    00000000   00001111222111  1111


Q ss_pred             cchhHHHHHHHHHHHhhccccchhhHhhHH--HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q psy15069        263 RDPIFILFTISNIFTSIGFNVPYVYIVKLA--EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA  340 (461)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~  340 (461)
                      +  -..-+.+.++..+....++   .|...  .+..-..++..+....+.++.+++|--...+  |  .|+.+++.+.-.
T Consensus       247 ~--ymiPL~lVY~aEY~InqGv---~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--r--ir~lwils~LQ~  317 (402)
T PF02487_consen  247 W--YMIPLFLVYFAEYFINQGV---APTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--R--IRRLWILSLLQV  317 (402)
T ss_pred             H--HHHHHHHHHHHHHHHHhch---HHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--e--hhhHHHHHHHHH
Confidence            1  1222344444444433332   23332  2233335667777778888888887643332  2  445444322222


Q ss_pred             HHHHH---HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069        341 ICGAA---TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA  411 (461)
Q Consensus       341 ~~~~~---~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~  411 (461)
                      +-.+.   -...-+.++.|.+.+.++..|+..|..+......+.+..++++|..++|.....-.+|-.++..++
T Consensus       318 ~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~  391 (402)
T PF02487_consen  318 INLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG  391 (402)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            22111   122334668888888899999999999998888889989999999999999988888877766553

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.23  E-value=1e-10  Score=116.03  Aligned_cols=175  Identities=15%  Similarity=0.215  Sum_probs=129.8

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC----CCCcchhHHHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD----RPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~~~~~~~~~~~~~~~~  342 (461)
                      ...+....+...+++.....+++.|+++.|.++...+.++.+..+..++..++.|+++|    |+||||.++. .+....
T Consensus         6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il-~g~~~~   84 (477)
T TIGR01301         6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIA-AGAALV   84 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHH-HHHHHH
Confidence            44455555566777777888899999999999999999999999999999999999999    4887776654 334444


Q ss_pred             HHHHHHhhhhhhH-----------------HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccch--hHHHHHHHHHHHhh
Q psy15069        343 GAATVICAFCYNY-----------------VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRL--TNAFGLLLLFQGIA  403 (461)
Q Consensus       343 ~~~~~~~~~~~~~-----------------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~g  403 (461)
                      .+++.++++.++.                 +..++...+..++.....+...+++.|.+|+++|  +.+.++.+.+.++|
T Consensus        85 ~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG  164 (477)
T TIGR01301        85 AFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIG  164 (477)
T ss_pred             HHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHH
Confidence            4555555554432                 2223334455667777777888899999998765  57999999999999


Q ss_pred             hhhccceeeee--eccc------------CCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        404 SLVGPPIAGFL--YDST------------LSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       404 ~~~gp~i~g~l--~~~~------------g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      +.+|+.+++..  .+..            .+++..|++.+++.+++.+...+.
T Consensus       165 ~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~  217 (477)
T TIGR01301       165 NVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA  217 (477)
T ss_pred             HHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence            99999988764  2211            157889998888877777665443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PTZ00207 hypothetical protein; Provisional

Probab=99.22  E-value=1e-10  Score=118.48  Aligned_cols=156  Identities=14%  Similarity=0.156  Sum_probs=118.8

Q ss_pred             cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh------hh
Q psy15069        281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC------YN  354 (461)
Q Consensus       281 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  354 (461)
                      .|.+..+.|.+.+++|++..+.+++.+... ...+..++.|++.||+|+|+.  +.++.++.+++.++..++      .+
T Consensus        43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~v--llig~ll~~iG~ll~ala~~~~i~~s  119 (591)
T PTZ00207         43 MYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPI--FVLSMTVFCLGTLLFALTFQEVIEGS  119 (591)
T ss_pred             HHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHHHhcccccCc
Confidence            456667788878999999999999887633 334567788999999665544  446666666776666665      57


Q ss_pred             HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHH
Q psy15069        355 YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFV  434 (461)
Q Consensus       355 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~  434 (461)
                      ++.+.+..++.|++.+...+.....+.+++| ++||.+.|+.....++|+++.+.+...+..  .+|+..|++.+++.++
T Consensus       120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~v  196 (591)
T PTZ00207        120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALV  196 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHH
Confidence            8888889999999998888888888999997 788999999999999999864444443433  2477888888888777


Q ss_pred             HHHHHHHH
Q psy15069        435 SGVMLFVI  442 (461)
Q Consensus       435 ~~~~~~~~  442 (461)
                      ..++++..
T Consensus       197 v~ll~~~~  204 (591)
T PTZ00207        197 VGILAIVF  204 (591)
T ss_pred             HHHHHHhh
Confidence            66665544

>KOG2615|consensus

Probab=99.20  E-value=7.2e-11  Score=109.45  Aligned_cols=129  Identities=20%  Similarity=0.234  Sum_probs=106.9

Q ss_pred             CCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHH
Q psy15069        297 VTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLT  376 (461)
Q Consensus       297 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~  376 (461)
                      .+..-.|.+-+.+.+..++.++.+|.++||+|||..  +..|++..++...+++.+.++..+++.+++.|++-|-. .+.
T Consensus        65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpv--ll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~  141 (451)
T KOG2615|consen   65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPV--LLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVI  141 (451)
T ss_pred             ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHH
Confidence            355678899999999999999999999999766554  44666777778888888888866666699999988754 556


Q ss_pred             HHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec---ccCCchHHHHHH
Q psy15069        377 SVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD---STLSYSPAFFLA  428 (461)
Q Consensus       377 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~---~~g~~~~~f~~~  428 (461)
                      .++++|++++++|+.+++.++...++|.++||.++|++..   ..|+|..++.-.
T Consensus       142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~  196 (451)
T KOG2615|consen  142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCL  196 (451)
T ss_pred             HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHH
Confidence            7789999999999999999999999999999999999987   667776655333

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.20  E-value=2.3e-11  Score=117.16  Aligned_cols=175  Identities=14%  Similarity=0.221  Sum_probs=125.2

Q ss_pred             ccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q psy15069        262 LRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA  340 (461)
Q Consensus       262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~  340 (461)
                      .||+.+|.+...+++.++......++.|.+++ +.|+|.+++|.++++..+..++.+++.|.++||.+.||.++..+..+
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l   83 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL   83 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence            57889999999999999999999999999995 58999999999999999999999999999999999888776554443


Q ss_pred             HHHHH-HHHhhhh----hhHH-HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee
Q psy15069        341 ICGAA-TVICAFC----YNYV-ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL  414 (461)
Q Consensus       341 ~~~~~-~~~~~~~----~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l  414 (461)
                      ....+ ++.+.+.    .+.+ ..++..+..+++..+..|+.-+++.+..  ++.+.-+|-..+.+++|.+++..++|.+
T Consensus        84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L  161 (412)
T PF01306_consen   84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGIL  161 (412)
T ss_dssp             HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhhee
Confidence            33222 2222222    2322 2223334456666666677766665553  5567789999999999999999999999


Q ss_pred             ecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        415 YDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       415 ~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      .+.  +.+..|++..+..++..++.+
T Consensus       162 ~~i--~p~~~fwi~s~~~~il~lll~  185 (412)
T PF01306_consen  162 FNI--NPNIIFWIASAAAIILLLLLL  185 (412)
T ss_dssp             HHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred             eee--CccHHHHHHHHHHHHHHHHHH
Confidence            986  356777766555444444333

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.18  E-value=4.3e-10  Score=113.37  Aligned_cols=179  Identities=17%  Similarity=0.145  Sum_probs=133.7

Q ss_pred             ccccchhHHHHHHHHHHHhhc----cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHH
Q psy15069        260 ELLRDPIFILFTISNIFTSIG----FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIY  335 (461)
Q Consensus       260 ~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~  335 (461)
                      ..+++++++..+.+..+....    .......++.+.++.|-+ .+..|+.+...++..++.++.|+++|.+||  +...
T Consensus        35 g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGR--r~~~  111 (599)
T PF06609_consen   35 GYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGR--RYFF  111 (599)
T ss_pred             CceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcc--hHHH
Confidence            456777776655444443333    233334456666888865 666788888899999999999999999664  4455


Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069        336 NGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY  415 (461)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~  415 (461)
                      ..+.++..++.+...-+++...++....+.|++.|... +....+.|..|.|.|..+.++.....-+...++|.++..+.
T Consensus       112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~  190 (599)
T PF06609_consen  112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA  190 (599)
T ss_pred             HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence            56777777888888888899999999999999977665 44556899999999998888777766666667888877766


Q ss_pred             cccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        416 DSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       416 ~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      .+ ++||+.|++..++..++.++.++..
T Consensus       191 ~~-~~WRw~~~~~~i~~~i~~vl~~~fY  217 (599)
T PF06609_consen  191 AH-SGWRWIFYIFIIWSGIALVLIFFFY  217 (599)
T ss_pred             cC-CCcchHHHHHHHHHHHHHHHHHHHh
Confidence            55 4799999999998887776655443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.15  E-value=6.1e-10  Score=109.62  Aligned_cols=176  Identities=11%  Similarity=0.006  Sum_probs=128.8

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHH--HHHHhhhhhhhhhhh-hhccCCCCcchhHHHHHHHHHH-
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSL--ISIVGAANMVSRVIL-GYISDRPCVNRLYIYNGCLAIC-  342 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~~g~~~~-g~l~dr~~~~~~~~~~~~~~~~-  342 (461)
                      +..+...++.+...+....+.+|.++++.|.|.++.|++  .....+..++..++. ++..||.|+||.+++...+... 
T Consensus         3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~   82 (390)
T TIGR02718         3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA   82 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence            455667788888888899999999999999999999997  456788888888888 5578998887776544333222 


Q ss_pred             -HHHHHHhhhhhh-HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC
Q psy15069        343 -GAATVICAFCYN-YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS  420 (461)
Q Consensus       343 -~~~~~~~~~~~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~  420 (461)
                       ...+.......+ ..+.....++.+++.+...+....+..|..++++++...+.......+|..+|+...+++.++.| 
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g-  161 (390)
T TIGR02718        83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG-  161 (390)
T ss_pred             HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence             111111212222 33334445556677777777777788888887877888888888788999999988889999875 


Q ss_pred             chHHHHHHhHHHHHHHHHHHHHH
Q psy15069        421 YSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       421 ~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      |+..|++.+++.++..+..+..+
T Consensus       162 w~~~f~~~a~l~~~~~~~~~~~~  184 (390)
T TIGR02718       162 QRPAFLLVACVPLASLVCVLWLK  184 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999988877666655443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.12  E-value=8.3e-11  Score=113.56  Aligned_cols=187  Identities=19%  Similarity=0.212  Sum_probs=153.8

Q ss_pred             cccch-hHHHHHHHHHHHhhccccchhhHhhHH-HHhC----CCchhhHHHHHHHhhhhhhhhhhhhhccCCC-CcchhH
Q psy15069        261 LLRDP-IFILFTISNIFTSIGFNVPYVYIVKLA-EQRG----VTRSNASSLISIVGAANMVSRVILGYISDRP-CVNRLY  333 (461)
Q Consensus       261 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g----~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~  333 (461)
                      .+++| .++.+...-+.-.+++|+....+..|+ .+.+    ++++++.-+++.++...-+..+++||++||+ |.+|..
T Consensus        16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI   95 (498)
T COG3104          16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI   95 (498)
T ss_pred             cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence            45555 577788889999999999999999888 6777    9999999999998888888999999999995 555544


Q ss_pred             HHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHhhhhhccc
Q psy15069        334 IYNGCLAICGAATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD--RLTNAFGLLLLFQGIASLVGPP  409 (461)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~gp~  409 (461)
                      +  .+.++..++-+.+...  .+...+++...+.++|.|..-+...+++.|++|++  +|-.+.++.++..++|+.++|.
T Consensus        96 ~--lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~  173 (498)
T COG3104          96 V--LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPI  173 (498)
T ss_pred             H--HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHH
Confidence            4  4555666666666555  35677888888888999999999999999999865  4677888899999999999999


Q ss_pred             eeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHhHh
Q psy15069        410 IAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLL  450 (461)
Q Consensus       410 i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~  450 (461)
                      +.+++.+..| |...|...++-..++.+..++.++..+...
T Consensus       174 i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~r~~~~~~  213 (498)
T COG3104         174 ITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGRRHVKGIG  213 (498)
T ss_pred             HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence            9999999975 999999999999988888877765544433

>KOG3762|consensus

Probab=99.12  E-value=1.2e-09  Score=105.87  Aligned_cols=186  Identities=14%  Similarity=0.111  Sum_probs=150.6

Q ss_pred             ccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069        260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL  339 (461)
Q Consensus       260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~  339 (461)
                      +++.++...++++...+..++...+.+++=-++++.|..+...|......-.+.++.=++.+++.+|+|.-+...  .++
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~--lgL  443 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY--LGL  443 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee--ehh
Confidence            456778777777777777777777888887778999988888887777777888888888999999977655543  445


Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH-HHhhhhhccceeeeeeccc
Q psy15069        340 AICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF-QGIASLVGPPIAGFLYDST  418 (461)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~~gp~i~g~l~~~~  418 (461)
                      ....+=++......|.|.....-++.|+..+..+....+++....|++.++++.|++... .++|-.+|.+|+|.+....
T Consensus       444 a~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f  523 (618)
T KOG3762|consen  444 ACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF  523 (618)
T ss_pred             hHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence            555556666777889999998999999999999999999999999999999999997766 5699999999999999988


Q ss_pred             CCchHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069        419 LSYSPAFFLAGGAIFVSGVMLFVIPSLQSY  448 (461)
Q Consensus       419 g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~  448 (461)
                      | -+..|...++.+++..+....+.+..++
T Consensus       524 g-~~ttf~~~giAcl~~l~~~~~iq~~l~~  552 (618)
T KOG3762|consen  524 G-ARTTFRIFGIACLVTLALFISIQLLLKR  552 (618)
T ss_pred             h-hHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            5 6788888888888777776666544433

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.10  E-value=4.2e-10  Score=110.11  Aligned_cols=174  Identities=18%  Similarity=0.227  Sum_probs=127.6

Q ss_pred             HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069        270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC  349 (461)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  349 (461)
                      +...++++++....+.+++|.|+++.|+|..|+|.+.+...+..+++.+++|.++||.+.+++. +.++.++.++.++..
T Consensus         7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~-l~~~~l~~~~~~~~~   85 (400)
T PF03825_consen    7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI-LALLSLLSALALLLL   85 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH-HHHHHHHHHHHHHHH
Confidence            5666677777888888999999999999999999999999999999999999999996444443 345555566666666


Q ss_pred             hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee-eeeecccC--CchHHHH
Q psy15069        350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA-GFLYDSTL--SYSPAFF  426 (461)
Q Consensus       350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~-g~l~~~~g--~~~~~f~  426 (461)
                      ...++++.+....+++.++..+..|+..++..+..+  +++.-+|-....+.+|-+++.... +.+.+..+  .....++
T Consensus        86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~  163 (400)
T PF03825_consen   86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY  163 (400)
T ss_pred             HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence            667788888888888888888889999888888875  456778888888888888775542 22222221  2334556


Q ss_pred             HHhHHHHHHHHHHHHHHHhh
Q psy15069        427 LAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       427 ~~~~~~l~~~~~~~~~~~~~  446 (461)
                      +.+.+.++.+...+.+|+.+
T Consensus       164 i~~~~~~ll~~~~l~lp~~~  183 (400)
T PF03825_consen  164 IAAILSLLLAGFALFLPKTP  183 (400)
T ss_pred             HHHHHHHHHHHHHHhCCCCc
Confidence            65555555554455555443

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.08  E-value=3.7e-10  Score=106.69  Aligned_cols=175  Identities=13%  Similarity=0.040  Sum_probs=126.7

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  345 (461)
                      .+++-.++.....+..+.+....+.+-+++|+|++|.+++.++..+.+.+.|++.|.+.||+|-|+...  .++++..+-
T Consensus        15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~--~s~~l~~IP   92 (417)
T COG2223          15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI--LSMLLLLIP   92 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH--HHHHHHHHH
Confidence            344433333333333333344444444899999999999999999999999999999999987555443  444444444


Q ss_pred             HHHhhhhh---hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC--
Q psy15069        346 TVICAFCY---NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS--  420 (461)
Q Consensus       346 ~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~--  420 (461)
                      .+...+..   ++|.+++...+.|++- ..++.....+.+.+|++++|.+.|+.. .+++|..+...++..+....|.  
T Consensus        93 ~~~~~~a~~~~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~  170 (417)
T COG2223          93 CLGLAFAVTYPSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLA  170 (417)
T ss_pred             HHHHHHHccCCchHHHHHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHH
Confidence            44444443   4557888888888654 456777778999999999999999999 9999998888887777777663  


Q ss_pred             chHHHHHHhHHHHHHHHHHHHHHH
Q psy15069        421 YSPAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       421 ~~~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      |+.+..+.....++..+..++.-+
T Consensus       171 w~~~~~i~~~~l~v~~v~~~~~~~  194 (417)
T COG2223         171 WRNVAGIYVVALAIAAVLAWLGMN  194 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC
Confidence            888888888777776666555433

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.07  E-value=3.3e-10  Score=113.29  Aligned_cols=163  Identities=12%  Similarity=0.034  Sum_probs=113.6

Q ss_pred             HhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC----CcchhHHHHHHHHHHHHHHHHhhh
Q psy15069        277 TSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP----CVNRLYIYNGCLAICGAATVICAF  351 (461)
Q Consensus       277 ~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----~~~~~~~~~~~~~~~~~~~~~~~~  351 (461)
                      .......+..+++.|+ ++.|+++.++|+++++..+...+..++.|+++||.    ||||.++ ..+....+++.+++.+
T Consensus        11 ~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i-~~~~~~~~i~~~~~~~   89 (437)
T TIGR00792        11 NNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWL-LIGAIPFSIVLVLLFT   89 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhH-HHhHHHHHHHHHHHHh
Confidence            3344455566777777 67899999999999999999999999999999984    4444444 3444444544444443


Q ss_pred             hhh------HHHHHHHHHHHhhhhhhHHHHHHHHHHHhc-CccchhHHHHHHHHHHHhhhhhccceeeeeecc------c
Q psy15069        352 CYN------YVELAIYAGVFGAMIGAYVGLTSVILVDLL-GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS------T  418 (461)
Q Consensus       352 ~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~------~  418 (461)
                      .++      .+...+..++++++.+.......++..|.. ++++|++..++.+....+|..+++.+.+.+...      .
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~  169 (437)
T TIGR00792        90 TPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDK  169 (437)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            332      334455556777777766666667777876 468899999999888888877766665555421      1


Q ss_pred             CCchHHHHHHhHHHHHHHHHHH
Q psy15069        419 LSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       419 g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      .+|+..+.+.+++.++..+..+
T Consensus       170 ~g~~~~~~i~~~l~~~~~~~~~  191 (437)
T TIGR00792       170 FGWFMFALVLALIGVVSLIICF  191 (437)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHH
Confidence            2588888888887776665543

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>KOG3098|consensus

Probab=99.06  E-value=2.1e-08  Score=97.81  Aligned_cols=311  Identities=17%  Similarity=0.096  Sum_probs=188.6

Q ss_pred             HHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHhhh-h
Q psy15069         29 ASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-E  107 (461)
Q Consensus        29 ~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~  107 (461)
                      .++.+..+.+++++++.+.|+.|+|..+.+|..+...-....-+. |-+.++++ ..+.|+|.+..|..--.++.++. +
T Consensus        56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfs-sallG~Gaallw~GqG~ylt~~st~  133 (461)
T KOG3098|consen   56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFS-SALLGFGAALLWTGQGGYLTSNSTR  133 (461)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHH-HHHhhhhHHheecccceehhhcCCh
Confidence            666777788899999999999999999999999998888776664 45666665 78999999999998888888888 5


Q ss_pred             ccchhhhhhhccchhhhHHHHhHHHHHHHHh--------hchh-H----------HHHHHHHHHHHHHHHHhhcccCCCC
Q psy15069        108 RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--------YGWK-I----------TLLVLSVTVLSAVLFGILLRPLEEQ  168 (461)
Q Consensus       108 ~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--------~gw~-~----------~f~i~~~~~l~~~i~~~~~~~~~~~  168 (461)
                      +++.+..++.-+....+.++|..+...+...        .+-+ .          ...+.++++.+..+...-.-.. |.
T Consensus       134 ~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~-p~  212 (461)
T KOG3098|consen  134 ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL-PS  212 (461)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec-Cc
Confidence            6778887777777667766665544433210        0111 0          1111222211111111111000 00


Q ss_pred             CCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCch
Q psy15069        169 PVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDD  248 (461)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (461)
                      +..+.++                                                           +..+        +.
T Consensus       213 ~~~~~~~-----------------------------------------------------------~~~~--------~~  225 (461)
T KOG3098|consen  213 KDVVNCK-----------------------------------------------------------SSSE--------TS  225 (461)
T ss_pred             cchhhhh-----------------------------------------------------------hhcc--------cc
Confidence            0000000                                                           0000        00


Q ss_pred             hhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH--H-HhCCCchh-hHHHHHHHhhhhhhhhhhhhhcc
Q psy15069        249 TKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA--E-QRGVTRSN-ASSLISIVGAANMVSRVILGYIS  324 (461)
Q Consensus       249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~g~s~~~-~~~~~~~~~~~~~~g~~~~g~l~  324 (461)
                      .....+.  ..+++++|+...+....+..+.....+....|..+  . ..+.+... .+......+++.+++....+.+.
T Consensus       226 ~~~~l~~--~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~  303 (461)
T KOG3098|consen  226 FSELLKL--TFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILS  303 (461)
T ss_pred             HHHHHHH--HHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            1111111  12467888888777777766666655555666554  2 44444333 44444567788888999999999


Q ss_pred             CCCC-cchhHHHHHHHHHHHHHHHHhhh-h-----------------hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC
Q psy15069        325 DRPC-VNRLYIYNGCLAICGAATVICAF-C-----------------YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG  385 (461)
Q Consensus       325 dr~~-~~~~~~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~  385 (461)
                      +|.+ .++.....++..+..+..++.-. .                 ++.....+..++.|++........+.++....|
T Consensus       304 ~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~  383 (461)
T KOG3098|consen  304 KRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP  383 (461)
T ss_pred             hhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence            8742 22222222222222222222111 1                 124455667789999999999999999999995


Q ss_pred             ccchhHHHHHHHHHHHhhhhhccceee
Q psy15069        386 LDRLTNAFGLLLLFQGIASLVGPPIAG  412 (461)
Q Consensus       386 ~~~~~~~~g~~~~~~~~g~~~gp~i~g  412 (461)
                       ++|.++.++..+-+.++..++-+...
T Consensus       384 -~~~~~~fsi~kfyq~~~s~v~~f~~~  409 (461)
T KOG3098|consen  384 -DDRAQAFSLFKFYQSVASCVAFFFSP  409 (461)
T ss_pred             -CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence             77899999998888888777655433

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=99.05  E-value=2.7e-08  Score=97.24  Aligned_cols=327  Identities=8%  Similarity=-0.005  Sum_probs=188.0

Q ss_pred             HHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhh------c--cc----chhhHHHHhh--cccccccc-ccchh
Q psy15069         33 VGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSV------F--AK----NVITLCITIG--FGTGLGFG-LIYLP   97 (461)
Q Consensus        33 ~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~------~--~~----~~~~l~i~~~--~l~G~g~~-~~~~~   97 (461)
                      .+...+.++..|.++||..|.+++..+.+.--++..+++      +  .+    +-+....++-  .+.|.-.- +....
T Consensus        48 ~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~  127 (432)
T PF06963_consen   48 SLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIAN  127 (432)
T ss_pred             HHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            556678899999999999999987777554433332211      1  11    1222222211  12221111 11222


Q ss_pred             HHHHHHhhh-------hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh-cccC----
Q psy15069         98 AIVSVTCYF-------ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL-LRPL----  165 (461)
Q Consensus        98 ~~~~~~~~f-------~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~-~~~~----  165 (461)
                      ..+.-.||.       ++.+.+.++...-.-.+.-+++|.+.+.+.+..+.+....+.++..+...+.=++ +...    
T Consensus       128 ~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~  207 (432)
T PF06963_consen  128 TIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSV  207 (432)
T ss_pred             hheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            233445664       2345667777777788899999999999999899999888888877766554332 2211    


Q ss_pred             CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069        166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (461)
                      |+..++++.+++..++                                               .+....+++++..+   
T Consensus       208 P~L~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~---  237 (432)
T PF06963_consen  208 PALAVKKRSSESESSS-----------------------------------------------DEESSSESSSDPSI---  237 (432)
T ss_pred             hHhcCCCCCccccccc-----------------------------------------------cccccccccchhhH---
Confidence            1111100000000000                                               00000000000000   


Q ss_pred             CchhhhhHhhh-h-ccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        246 SDDTKQTLREM-L-DMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       246 ~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                      .+..+...++. . ...++++| .++..++..+.++..-.+...+..|+...|+++...|..-+...+.++.|.++..++
T Consensus       238 ~~~~~~~~~~~~~~w~~Y~~q~-vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l  316 (432)
T PF06963_consen  238 LKRLWNPLRTIIRGWRTYFRQP-VFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWL  316 (432)
T ss_pred             HHHHHHHHHHHhccHHHHHhCH-HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            01111111111 1 12355665 445566666666666677788889998889999999999999999999999999999


Q ss_pred             cCCCCcchhHHHH----HHHHHHHHHHHHhhhhh----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069        324 SDRPCVNRLYIYN----GCLAICGAATVICAFCY----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL  395 (461)
Q Consensus       324 ~dr~~~~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  395 (461)
                      .+|+|.-|.-...    ..++..++..+..+-.+    +...+....++-=+|.-...-...-+++|.+|+++||+..|.
T Consensus       317 ~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gv  396 (432)
T PF06963_consen  317 MKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGV  396 (432)
T ss_pred             HHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHH
Confidence            9998876653322    22333333333222222    222333333444455555666667789999999999999999


Q ss_pred             HHHHHHhhhhhccce
Q psy15069        396 LLLFQGIASLVGPPI  410 (461)
Q Consensus       396 ~~~~~~~g~~~gp~i  410 (461)
                      -+..+++...+--.+
T Consensus       397 q~sl~~lf~ll~~~~  411 (432)
T PF06963_consen  397 QNSLQSLFELLSFVL  411 (432)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999988877665443

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.05  E-value=1.5e-09  Score=106.44  Aligned_cols=126  Identities=13%  Similarity=0.123  Sum_probs=95.5

Q ss_pred             hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHH--------HHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy15069        311 AANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYV--------ELAIYAGVFGAMIGAYVGLTSVILVD  382 (461)
Q Consensus       311 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~  382 (461)
                      ++..+++++.|+++||+|+|+.++  .+.++.+++.++..+.++..        .+++.+++.|++.+...+....++.|
T Consensus        46 ~~~~i~~~~~G~l~dr~g~r~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~  123 (394)
T TIGR00883        46 LARPLGAIVFGHFGDRIGRKKTLV--ITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAE  123 (394)
T ss_pred             HHhhhHHHHhhhhhhhhhhHHHHH--HHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence            334578999999999977555443  55666666666666666643        46677889999999888888999999


Q ss_pred             hcCccchhHHHHHHHHHHHhhhhhccceeeeee--------cccCCchHHHHHHhHHHHHHHHHH
Q psy15069        383 LLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY--------DSTLSYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       383 ~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~--------~~~g~~~~~f~~~~~~~l~~~~~~  439 (461)
                      .+|+++|+...++.+....+|..+++.+.+.+.        +.. +|+..|++.+++.+++.+..
T Consensus       124 ~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~  187 (394)
T TIGR00883       124 YAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW-GWRIPFLVSAVLVLIGLYLR  187 (394)
T ss_pred             cCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhcc-chHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999988766543        223 58888887776665554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>KOG2504|consensus

Probab=99.04  E-value=7.3e-10  Score=111.29  Aligned_cols=173  Identities=14%  Similarity=0.156  Sum_probs=143.2

Q ss_pred             HHHHHHHHHHhhcc----ccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGF----NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG  343 (461)
Q Consensus       268 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~  343 (461)
                      |.++++.|+.+...    +.+..+.+.+.++++.+.++++++.++......+..++.+.+.||+|.|...  +.+.++.+
T Consensus        45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~--i~G~~v~~  122 (509)
T KOG2504|consen   45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM--IAGGLVAA  122 (509)
T ss_pred             eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH--HHHHHHHH
Confidence            55555555554443    3344566677789999999999999999999999999999999997766554  46777888


Q ss_pred             HHHHHhhhhhhHHHHHHHH-HHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069        344 AATVICAFCYNYVELAIYA-GVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS  422 (461)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~-~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~  422 (461)
                      +++++..++++.|.+++.. ++.|+|.++.+.....++..+|+ ++|+.+.|+.....++|.++-|.+..++.+..| |+
T Consensus       123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G-~r  200 (509)
T KOG2504|consen  123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG-WR  200 (509)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC-cH
Confidence            8999999999998887665 78899999988888888998887 889999999999999999999999999999986 99


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHH
Q psy15069        423 PAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       423 ~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      ..+++.+.+.+-.++.....++
T Consensus       201 ~~~l~~~~~~l~~~~~~~~~rp  222 (509)
T KOG2504|consen  201 GALLIFGGISLNVLVAGALLRP  222 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCC
Confidence            9999988888777776666655

>KOG0255|consensus

Probab=99.04  E-value=5.7e-10  Score=114.22  Aligned_cols=147  Identities=16%  Similarity=0.097  Sum_probs=126.7

Q ss_pred             HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhH
Q psy15069        293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAY  372 (461)
Q Consensus       293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  372 (461)
                      +....+.....+..+++.++.++|.+++|.++||+||  +.++.+++++..++.+...++++++.+.+.+++.|++.+..
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GR--k~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~  188 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGR--KPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP  188 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhccc--HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccch
Confidence            4455677788888999999999999999999999554  44455777777888888889999999999999999999999


Q ss_pred             HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069        373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL  445 (461)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~  445 (461)
                      ......++.|++++++|+.+..+ ......++.++|..++++..   +|++.+++..+..++..+..++.++.
T Consensus       189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es  257 (521)
T KOG0255|consen  189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPES  257 (521)
T ss_pred             hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcC
Confidence            99999999999999999999999 88888899999999888887   69999999999888887775554343

>KOG2533|consensus

Probab=99.03  E-value=6.4e-10  Score=110.66  Aligned_cols=147  Identities=14%  Similarity=0.124  Sum_probs=122.7

Q ss_pred             HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhH
Q psy15069        293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAY  372 (461)
Q Consensus       293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  372 (461)
                      ++.++...+.+.+.+++.++.+++.+.++.+.||+.  ....+..+.++.++..++....++++.+++.+++.|++.+..
T Consensus        74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~--ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~  151 (495)
T KOG2533|consen   74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP--LSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG  151 (495)
T ss_pred             cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence            677888899999999999999999999999999965  333333444444444444445779999999999999999999


Q ss_pred             HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc-----cCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS-----TLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~-----~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      +|....++..++++++++..+|+.+...++|+++|+.++..+...     .-+|++.|++.+++.++..+++++
T Consensus       152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~  225 (495)
T KOG2533|consen  152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFF  225 (495)
T ss_pred             chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEE
Confidence            999999999999999999999999999999999999998876421     125999999999998887766553

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.98  E-value=4.4e-09  Score=98.96  Aligned_cols=175  Identities=14%  Similarity=0.134  Sum_probs=138.9

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT  346 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  346 (461)
                      +.......++..+........+|.+.+.++++..+++++...+..+..++++..|++.+|+|.|+-.++  ++.+++++.
T Consensus        15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l--gL~l~avg~   92 (422)
T COG0738          15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL--GLLLYAVGA   92 (422)
T ss_pred             HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHH--HHHHHHHHH
Confidence            344455555555666666778888889999999999999999999999999999999999888887664  455555555


Q ss_pred             HHhh---hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc------
Q psy15069        347 VICA---FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS------  417 (461)
Q Consensus       347 ~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~------  417 (461)
                      .++.   ...++..+....++.|.|.+........++..+.+++....-+++...+..+|.++||.+++.+.++      
T Consensus        93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~  172 (422)
T COG0738          93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM  172 (422)
T ss_pred             HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence            4443   3446777777889999999999999999999999988888999999999999999999999999873      


Q ss_pred             ------------cCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        418 ------------TLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       418 ------------~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                                  ..+++.++...+.+.++.++.....+
T Consensus       173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k  210 (422)
T COG0738         173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSK  210 (422)
T ss_pred             CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence                        22467777777777666666555443

>TIGR01272 gluP glucose/galactose transporter

Probab=98.97  E-value=1.1e-09  Score=103.89  Aligned_cols=143  Identities=13%  Similarity=0.144  Sum_probs=116.3

Q ss_pred             eeeeehHHHHhH---hcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHH
Q psy15069          6 SFGILFIEFTKV---FQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCIT   82 (461)
Q Consensus         6 ~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~   82 (461)
                      +.+..++.+.+|   +|.+..+.++..+.+..++.++.++.+++.||+|+|+++..+.++..++.++....++.+.++. 
T Consensus       158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~~-  236 (310)
T TIGR01272       158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMWF-  236 (310)
T ss_pred             HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH-
Confidence            344455666654   5899999999999999999999999999999999999998888888888776666555444443 


Q ss_pred             hhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHH
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVT  151 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~  151 (461)
                      . ++.|++.+..+|...+...+.+|++.+.+.++. ....+|+.++|++.+.+.+.+|.+.+|++..+.
T Consensus       237 ~-~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~  303 (310)
T TIGR01272       237 V-LALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC  303 (310)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence            2 577899999999999888888888778888886 456689999999999999999999998744433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG0254|consensus

Probab=98.90  E-value=2.3e-08  Score=101.99  Aligned_cols=143  Identities=16%  Similarity=0.188  Sum_probs=118.2

Q ss_pred             hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHH
Q psy15069        301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVIL  380 (461)
Q Consensus       301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~  380 (461)
                      +.+++.+...+++.+++++.|+++|++|||+.++  ++.+...++.++..++.+.+.+++.+++.|++.|....+.+.++
T Consensus        90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~--~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~  167 (513)
T KOG0254|consen   90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL--LAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYI  167 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhH
Confidence            4489999999999999999999999977665544  56667777778888888999999999999999999999999999


Q ss_pred             HHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc-CCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069        381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST-LSYSPAFFLAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~-g~~~~~f~~~~~~~l~~~~~~~~~~~~~  446 (461)
                      .|..|++.||...+.......+|..++ .+.|...++. .+|+..+.+..+.+++..+..+++++..
T Consensus       168 sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp  233 (513)
T KOG0254|consen  168 SEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESP  233 (513)
T ss_pred             hhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence            999999999999999999999888888 4545555433 3599888888888777777755555433

>PRK09669 putative symporter YagG; Provisional

Probab=98.88  E-value=7.8e-09  Score=103.60  Aligned_cols=170  Identities=12%  Similarity=0.093  Sum_probs=111.4

Q ss_pred             HHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC----CCcchhHHHHHHHHHHHH
Q psy15069        270 FTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR----PCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~~~~~~~~~~~~~~~~~~  344 (461)
                      ..++.+..+.....+..+++.|+ +..|+++.++|.++++.-+...+..++.|+++||    +||||.+++ .+.+..++
T Consensus        14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il-~~~~~~~i   92 (444)
T PRK09669         14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLL-WFAIPFGV   92 (444)
T ss_pred             hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHH-HHHHHHHH
Confidence            33444444444455567788887 8899999999999999999999999999999998    455555554 33333333


Q ss_pred             HHHHhhhhh------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc-CccchhHHHHHHHHHHHhhhhhccceeeeeecc
Q psy15069        345 ATVICAFCY------NYVELAIYAGVFGAMIGAYVGLTSVILVDLL-GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS  417 (461)
Q Consensus       345 ~~~~~~~~~------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~  417 (461)
                      ...+....+      ..++..+..++++.+.........++..|+. ++++|.+..+.......+|+.+++.+...+...
T Consensus        93 ~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~  172 (444)
T PRK09669         93 VCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI  172 (444)
T ss_pred             HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333322232      1344444555666666666666667888887 457788888888888888877776654443332


Q ss_pred             cC------CchHHHHHHhHHHHHHHHHHH
Q psy15069        418 TL------SYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       418 ~g------~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      .+      +|...+.+.+++.++..+.++
T Consensus       173 ~~~~~~~~g~~~~~~i~~ii~~v~~~~~~  201 (444)
T PRK09669        173 LGKGDEQKGYFYAMMVMGLLGVVLFFCCF  201 (444)
T ss_pred             hCCCchhhhHHHHHHHHHHHHHHHHHHHh
Confidence            21      366666666666555554443

>TIGR00788 fbt folate/biopterin transporter

Probab=98.87  E-value=1.2e-08  Score=102.67  Aligned_cols=177  Identities=9%  Similarity=0.055  Sum_probs=125.9

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCC---cchhHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPC---VNRLYIYNGCLA  340 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~---~~~~~~~~~~~~  340 (461)
                      +...++...++.+... +.....++.++ +++|++.++.+...+...+...+ ++++|+++||++   +||++.+..+.+
T Consensus        26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~  103 (468)
T TIGR00788        26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGL  103 (468)
T ss_pred             hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHH
Confidence            3444555567777777 66666777777 57899999999999999988886 556999999974   566666555555


Q ss_pred             HH-HHHHHHhhhhhhHH-HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH---HHHHHHHHHhhhhhccceeeeee
Q psy15069        341 IC-GAATVICAFCYNYV-ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA---FGLLLLFQGIASLVGPPIAGFLY  415 (461)
Q Consensus       341 ~~-~~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~g~~~gp~i~g~l~  415 (461)
                      +. .+....+...++.. ...+.+++.+++.+......-++..|..+ +++...   ..+.....++|..+|+.++|.+.
T Consensus       104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~  182 (468)
T TIGR00788       104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL  182 (468)
T ss_pred             HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence            55 23333333334433 33346778888888888888899999988 544443   33444445589999999999999


Q ss_pred             cccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069        416 DSTLSYSPAFFLAGGAIFVSGVMLFVIPSL  445 (461)
Q Consensus       416 ~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~  445 (461)
                      +..+ |+..|++.+++.++..+..+++++.
T Consensus       183 ~~~~-~~~~f~~~a~l~ll~~~~~~~~~E~  211 (468)
T TIGR00788       183 DKTL-TRILFLITAALLLLQLFVSNLSKER  211 (468)
T ss_pred             HhcC-cchHHHHHHHHHHHHHHHHHhcccc
Confidence            9874 9999999888887775555555443

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.86  E-value=4.2e-08  Score=91.11  Aligned_cols=158  Identities=14%  Similarity=0.021  Sum_probs=132.2

Q ss_pred             cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy15069        281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAI  360 (461)
Q Consensus       281 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (461)
                      ...+.+.++.+-++.|+|.+.+|++.++.-++-.+.+++..++..|+|..|...  .++++.+++.++=... +.+.++.
T Consensus        28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~--~~Llli~~G~~iR~~~-~~~~L~~  104 (395)
T COG2807          28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLF--LALLLIAAGILIRSLG-GLPLLFL  104 (395)
T ss_pred             hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHH--HHHHHHHHHHHHHhcc-cHHHHHH
Confidence            345556666777899999999999999999999999999999999987776655  3444444444433223 6777888


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        361 YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       361 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      ...+.|.+.+..+.+.++++.+.|| ++.+..+|++.+..++++++++.+.-.+.++.++|+..+.+-+...+++.+.++
T Consensus       105 gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl  183 (395)
T COG2807         105 GTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL  183 (395)
T ss_pred             HHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence            8899999999999999999999998 778999999999999999999999999999887899999999999988888776


Q ss_pred             HH
Q psy15069        441 VI  442 (461)
Q Consensus       441 ~~  442 (461)
                      .-
T Consensus       184 Pq  185 (395)
T COG2807         184 PQ  185 (395)
T ss_pred             hh
Confidence            54

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.84  E-value=6e-09  Score=103.91  Aligned_cols=170  Identities=15%  Similarity=0.095  Sum_probs=121.8

Q ss_pred             HHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC----CCCcchhHHHHHHHHHHHHHHHHh
Q psy15069        275 IFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISD----RPCVNRLYIYNGCLAICGAATVIC  349 (461)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~~~~~~~~~~~~~~~~~~~~~~~  349 (461)
                      +...+.......+++.|+ +..|+++...+.+..+..+...+..++.|.++|    |+||||.+++ .+....+++..++
T Consensus        11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l-~g~i~~~~~~~ll   89 (428)
T PF13347_consen   11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWIL-IGAILLALSFFLL   89 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEee-hhhHHHHHHHHHh
Confidence            333444444555777776 777999999999999999999999999999999    6787666554 4444555555544


Q ss_pred             hhh-h-------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHHhhhhhccceeeeeecccC-
Q psy15069        350 AFC-Y-------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL-  419 (461)
Q Consensus       350 ~~~-~-------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g-  419 (461)
                      ... +       ...+..+..+++.++.........++..|+.+ +++|.+..+..+.+..+|..+...+.+.+.+..| 
T Consensus        90 f~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~  169 (428)
T PF13347_consen   90 FSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG  169 (428)
T ss_pred             hccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence            433 2       12234555566788888777777888899987 4689999999999989988777777777765544 


Q ss_pred             -----CchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069        420 -----SYSPAFFLAGGAIFVSGVMLFVIPSL  445 (461)
Q Consensus       420 -----~~~~~f~~~~~~~l~~~~~~~~~~~~  445 (461)
                           +|.....+.+++.++..+..++..++
T Consensus       170 ~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke  200 (428)
T PF13347_consen  170 GDTSNGYRWMALVLAIVGLVFFLITFFFVKE  200 (428)
T ss_pred             CccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence                 47777777777777666655544333

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=98.82  E-value=1e-08  Score=102.43  Aligned_cols=161  Identities=14%  Similarity=0.093  Sum_probs=133.4

Q ss_pred             CCcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcc--eeeehhhHHHHHHHHHhhc------
Q psy15069          1 DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCR--NVTICGAILGSACLAVSVF------   72 (461)
Q Consensus         1 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r--~~~~~g~~~~~~~~~l~~~------   72 (461)
                      ||...........-.+++|++..++..+.-+..+...++..+.|++.||+|.|  +++..+.+++.+..+...+      
T Consensus       295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~  374 (477)
T PF11700_consen  295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSF  374 (477)
T ss_pred             HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            34444445555666678999999999999999999999999999999999999  8888888877665555444      


Q ss_pred             --ccchhhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc-hhHHHHHH
Q psy15069         73 --AKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG-WKITLLVL  148 (461)
Q Consensus        73 --~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g-w~~~f~i~  148 (461)
                        .++-|.+++. .++.|+..|...+...++..+..| ++.+...|++....-....++|.+.+.+.+..| -|+.+..+
T Consensus       375 ~g~~~~~~f~~~-a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l  453 (477)
T PF11700_consen  375 FGLKSPWEFWVL-AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFL  453 (477)
T ss_pred             cCcccHHHHHHH-HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence              5777888874 789999999999999999999886 677999999999999999999999999999876 89998888


Q ss_pred             HHHHHHHHHHHhhc
Q psy15069        149 SVTVLSAVLFGILL  162 (461)
Q Consensus       149 ~~~~l~~~i~~~~~  162 (461)
                      .++.++..++.++.
T Consensus       454 ~~lf~~gl~ll~~v  467 (477)
T PF11700_consen  454 LVLFLIGLILLFFV  467 (477)
T ss_pred             HHHHHHHHHHHhhc
Confidence            88777766655443

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.81  E-value=2.9e-08  Score=100.31  Aligned_cols=171  Identities=10%  Similarity=0.081  Sum_probs=113.7

Q ss_pred             HHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC----CCcchhHHHHHHHHHHH
Q psy15069        269 LFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR----PCVNRLYIYNGCLAICG  343 (461)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~~~~~~~~~~~~~~~~~  343 (461)
                      ...++.+..+.....+.+|++.|+ +..|+++..+|.++.+.-+...+..++.|+++||    +|++|.+++ .+....+
T Consensus        10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il-~g~i~~~   88 (473)
T PRK10429         10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWIL-IGTLANS   88 (473)
T ss_pred             hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHh-hhhHHHH
Confidence            344555555666666778888888 6679999999999999999999999999999994    477666554 3444445


Q ss_pred             HHHHHhhhhh----h--HHHHHHHHHHHhhhhhhHHHHHHHHHHHhc-CccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069        344 AATVICAFCY----N--YVELAIYAGVFGAMIGAYVGLTSVILVDLL-GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       344 ~~~~~~~~~~----~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~  416 (461)
                      +.+.++...+    +  .+++.+..+++++++........++..|+. ++++|.+..++...+.++|+.+.+.+...+.+
T Consensus        89 i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~  168 (473)
T PRK10429         89 VVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVN  168 (473)
T ss_pred             HHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5443332222    1  223444455677777777777888889988 57899999998777777776666554443322


Q ss_pred             ccC------CchHHHHHHhHHHHHHHHHHH
Q psy15069        417 STL------SYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       417 ~~g------~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      ..|      .|.....+.+++.++..+.++
T Consensus       169 ~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~  198 (473)
T PRK10429        169 YVGGGDRGFGFQMFTLVLIAFFIVSTIITL  198 (473)
T ss_pred             HhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            222      245555555555444444433

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=98.78  E-value=1.4e-10  Score=116.42  Aligned_cols=145  Identities=17%  Similarity=0.172  Sum_probs=118.2

Q ss_pred             hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHhhhhhhHHHHH
Q psy15069        300 SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY---NYVELAIYAGVFGAMIGAYVGLT  376 (461)
Q Consensus       300 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~  376 (461)
                      .+.++..+...++.++|.+++|+++||+|||+.++  .+.++..++.++..+++   +++.+.+.+++.|++.|...+..
T Consensus        46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~  123 (451)
T PF00083_consen   46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALI--ISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS  123 (451)
T ss_pred             HHHHHHHHHHHhhhccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccc
Confidence            45678889999999999999999999988776554  45556666677777788   88999999999999999999999


Q ss_pred             HHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc--CCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069        377 SVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST--LSYSPAFFLAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       377 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~--g~~~~~f~~~~~~~l~~~~~~~~~~~~~  446 (461)
                      ..++.|..|+++|+...++.+....+|..++..+.-.+.+..  ..|+..+.+.++..++..+..+++|+..
T Consensus       124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP  195 (451)
T PF00083_consen  124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESP  195 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999998888888877754443322  1499999888888877766666666543

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>KOG0569|consensus

Probab=98.77  E-value=6.7e-08  Score=95.28  Aligned_cols=147  Identities=16%  Similarity=0.126  Sum_probs=111.3

Q ss_pred             hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH-HHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHH
Q psy15069        302 ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC-GAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVIL  380 (461)
Q Consensus       302 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~  380 (461)
                      .+...+++.+++++|+++.++++||+|||....+.....+. ++........++...+++.+++.|+..+......+.++
T Consensus        62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl  141 (485)
T KOG0569|consen   62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL  141 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            34567778899999999999999998877544433333222 23333334456788899999999999999999999999


Q ss_pred             HHhcCccchhHHHHHHHHHHHhhhhhccceee-eeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069        381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG-FLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSY  448 (461)
Q Consensus       381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g-~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~  448 (461)
                      .|..|.+.||....+..+...+|..++..++. .+...-..|.+.+.+..+..++..++..++|+..|.
T Consensus       142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~  210 (485)
T KOG0569|consen  142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKY  210 (485)
T ss_pred             hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcch
Confidence            99999999999999999999999888854433 333333358888888888888887777777665543

>KOG3810|consensus

Probab=98.74  E-value=4.9e-07  Score=83.20  Aligned_cols=348  Identities=12%  Similarity=0.063  Sum_probs=217.2

Q ss_pred             HhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHH-Hhhhhccchh
Q psy15069         34 GVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSV-TCYFERLRSL  112 (461)
Q Consensus        34 ~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~-~~~f~~~rg~  112 (461)
                      -.+.+.-.+.=.+.|..-.|++++.-.+-.....++.-+.++++.+=+. -+..|...+.- .+-++.+ +.+-|+++-+
T Consensus        53 YSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvl-E~FyG~~tAaE-IAYysYIYs~Vd~~~Yqr  130 (433)
T KOG3810|consen   53 YSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVL-EFFYGPATAAE-IAYYSYIYSKVDPEMYKR  130 (433)
T ss_pred             HHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeee-hhhcChHHHHH-HhhhheeeeecCHHHHHH
Confidence            3344555566678899999999999988888888888899999988764 57777765542 2222333 2233788999


Q ss_pred             hhhhhccchhhhHHHHhHHHHHHHHhhchhHHHH-HHHHHHHHHHHHHhhcccCCCCCC-CCcccCCCCCcccccccccc
Q psy15069        113 ATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLL-VLSVTVLSAVLFGILLRPLEEQPV-EEPVEDGALPHLRIIIFEVK  190 (461)
Q Consensus       113 a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~-i~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  190 (461)
                      +.|..-+..-.|-.++..++..++..-.+.+..+ .+...+..+.....+++|.+++.. .++..++..           
T Consensus       131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~-----------  199 (433)
T KOG3810|consen  131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKIS-----------  199 (433)
T ss_pred             HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccce-----------
Confidence            9999999999999999999998887555544322 222222223333334445443111 111000000           


Q ss_pred             cccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhh--ccccccchhHH
Q psy15069        191 PKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREML--DMELLRDPIFI  268 (461)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~  268 (461)
                                              .++..+        .   +  ++.+.     ....+.......  -....+||+..
T Consensus       200 ------------------------v~~~e~--------~---~--~~~~~-----~~~l~~~~~~l~~~l~~~y~np~ll  237 (433)
T KOG3810|consen  200 ------------------------VGDLEE--------M---N--PQASY-----MSYLRGAFVLLWRDLQECYSNPRLL  237 (433)
T ss_pred             ------------------------eccchh--------c---C--ccchh-----hHHHHHHHHHHHHHHHHHhcCchhh
Confidence                                    000000        0   0  00000     000111111110  01346777776


Q ss_pred             HHHHHHHHHhhccccchhhHhhHHHHhCCCch--hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069        269 LFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS--NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT  346 (461)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~--~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  346 (461)
                      .-.+-..+..++++-+..|....-++..-.+.  --|..=++..+.++++.+..|.+.-++.+.+..++.++.+.-+-++
T Consensus       238 ~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agll  317 (433)
T KOG3810|consen  238 KWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLL  317 (433)
T ss_pred             hhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhh
Confidence            66666777777877777777666666531111  1233455667778888999999988765555667767766666677


Q ss_pred             HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC-------
Q psy15069        347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL-------  419 (461)
Q Consensus       347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g-------  419 (461)
                      +++..+.++|+.++..+++...+....++....+++....+..|...|+..+..-+-..+-..+   ..|..|       
T Consensus       318 f~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~  394 (433)
T KOG3810|consen  318 FIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRT  394 (433)
T ss_pred             hhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcce
Confidence            7777888999999999999888888888888888888888999999999887766555444433   455332       


Q ss_pred             ---CchHHHHHHhHHHHHHHHHH
Q psy15069        420 ---SYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       420 ---~~~~~f~~~~~~~l~~~~~~  439 (461)
                         -|..-|.+.+++.++.+...
T Consensus       395 Q~~~Y~~Yf~v~~~i~~~~~~~~  417 (433)
T KOG3810|consen  395 QFVVYSSYFIVLGVIFLIGFGIE  417 (433)
T ss_pred             eEEEEeehHHHHHHHHHHHHHHH
Confidence               25566777777777776553

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=98.73  E-value=6.1e-08  Score=91.97  Aligned_cols=157  Identities=13%  Similarity=0.115  Sum_probs=125.8

Q ss_pred             CCcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHH
Q psy15069          1 DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLC   80 (461)
Q Consensus         1 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~   80 (461)
                      ||++..+..-...=..++|++..++.++.-..++....++++.|+|.||+|.|+++..+.++..+.++...+...-..+.
T Consensus       266 DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~  345 (438)
T COG2270         266 DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFW  345 (438)
T ss_pred             hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHH
Confidence            34433333333333558999999999999999999999999999999999999999999999999998877766655555


Q ss_pred             HHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHH
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLF  158 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~  158 (461)
                      + +..+.|...|.....+.++..+..| +|-++..|++....-.+...+|.+.+.+.+.. +-|..+..+.++.++..+.
T Consensus       346 i-~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~  424 (438)
T COG2270         346 I-LGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL  424 (438)
T ss_pred             H-HHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence            5 3688899999999999999999986 67799999999999999999999999988754 4676666665555444433

>PRK11462 putative transporter; Provisional

Probab=98.71  E-value=9.4e-08  Score=96.06  Aligned_cols=171  Identities=10%  Similarity=0.079  Sum_probs=117.1

Q ss_pred             HHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC----CCcchhHHHHHHHHHHHH
Q psy15069        270 FTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR----PCVNRLYIYNGCLAICGA  344 (461)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~~~~~~~~~~~~~~~~~~  344 (461)
                      ..++.+..+.....+..|+..|+ +..|+++..+|.++.+.-+-..+.-|+.|+++||    +||+|.+++. +.+..++
T Consensus        14 Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~-g~i~~~i   92 (460)
T PRK11462         14 YGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLF-GALPFGI   92 (460)
T ss_pred             hccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhH-HHHHHHH
Confidence            34444445555566667788887 7789999999999999999999999999999996    4666666543 3334444


Q ss_pred             HHHHhhhhhh------HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHHhhhhhccceeeeeecc
Q psy15069        345 ATVICAFCYN------YVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS  417 (461)
Q Consensus       345 ~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~  417 (461)
                      ...++...++      .....+..+++.+++........++..|+.+ +++|.+..++......+|..+++.+...+...
T Consensus        93 ~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~  172 (460)
T PRK11462         93 VCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL  172 (460)
T ss_pred             HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4433332221      2334445566788888777777888888886 68899999999999998888877765555443


Q ss_pred             cC------CchHHHHHHhHHHHHHHHHHHH
Q psy15069        418 TL------SYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       418 ~g------~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      .|      +|.....+.+++.+++.+.++.
T Consensus       173 ~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~  202 (460)
T PRK11462        173 IGGDNKPLGFQGGIAVLSVVAFMMLAFCFF  202 (460)
T ss_pred             hCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence            33      3555555555555554444433

>KOG2325|consensus

Probab=98.70  E-value=3e-07  Score=90.11  Aligned_cols=176  Identities=12%  Similarity=0.120  Sum_probs=124.2

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHH--hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQ--RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  342 (461)
                      |..++..+..++....++.+.+-.-+|+++  .+-+.+..|++.+...++..++++++|++..|.+.-++.+ .++.+++
T Consensus        34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl-i~s~ii~  112 (488)
T KOG2325|consen   34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL-IVSFLIA  112 (488)
T ss_pred             HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH-HHHHHHH
Confidence            346667777777777777777777778866  7888899999999999999999999999999965333333 3455555


Q ss_pred             HHHHHHh---hhhh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee----ee
Q psy15069        343 GAATVIC---AFCY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA----GF  413 (461)
Q Consensus       343 ~~~~~~~---~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~----g~  413 (461)
                      .++.++.   ...+  ..+.+.+.+++.|++.+....+. .++++..-.++|.++++..+..+.+|.++||.+.    +.
T Consensus       113 ~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR-~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L  191 (488)
T KOG2325|consen  113 IIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLR-AYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL  191 (488)
T ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHH-HHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence            5554443   2222  56778888999999988655554 4566655567888888888887777777777553    22


Q ss_pred             eec--------ccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        414 LYD--------STLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       414 l~~--------~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      ..+        +...|..+-++.+++.++.+++.++.
T Consensus       192 g~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~  228 (488)
T KOG2325|consen  192 GEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFF  228 (488)
T ss_pred             cCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhh
Confidence            221        12247788888888888777665544

>KOG0252|consensus

Probab=98.64  E-value=1.7e-08  Score=96.23  Aligned_cols=186  Identities=13%  Similarity=0.127  Sum_probs=120.7

Q ss_pred             ccchhHHHHHHHHHHHhhc---cccchhhHhhHHH----Hh----CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcc
Q psy15069        262 LRDPIFILFTISNIFTSIG---FNVPYVYIVKLAE----QR----GVTRSNASSLISIVGAANMVSRVILGYISDRPCVN  330 (461)
Q Consensus       262 l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~----g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~  330 (461)
                      ++.+.+-.+.++.+-....   ...+....|.+-.    ..    ++++...+.+.....++.++|++++|++.||+|||
T Consensus        35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK  114 (538)
T KOG0252|consen   35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK  114 (538)
T ss_pred             hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence            4555565555554433322   2333333333322    12    15667788888899999999999999999997766


Q ss_pred             hhHHHHHHHHHHHHHHHHhhh--hh-h----HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069        331 RLYIYNGCLAICGAATVICAF--CY-N----YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA  403 (461)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~--~~-~----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  403 (461)
                      +..  ...++++.++.++..+  .. +    .+++...+++.|+|.|.-+|+..++..|....+.||+-.+.....++.|
T Consensus       115 ~vY--G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~G  192 (538)
T KOG0252|consen  115 KVY--GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFG  192 (538)
T ss_pred             hhh--hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchh
Confidence            554  3444444444433333  22 1    3466778899999999999999999999999999999999988888887


Q ss_pred             hhhccceeeeee---c-cc----------CCchHHHHHHhHHHHHHHHHHHHHHHhhHhH
Q psy15069        404 SLVGPPIAGFLY---D-ST----------LSYSPAFFLAGGAIFVSGVMLFVIPSLQSYL  449 (461)
Q Consensus       404 ~~~gp~i~g~l~---~-~~----------g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~  449 (461)
                      ...|.+++-.+.   + ..          +-||..|.+..+..++....-+.++..++.+
T Consensus       193 ilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~  252 (538)
T KOG0252|consen  193 ILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYT  252 (538)
T ss_pred             HhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHH
Confidence            777765543332   1 11          1277777666665555544444445555444

>KOG0637|consensus

Probab=98.64  E-value=1.1e-07  Score=90.67  Aligned_cols=365  Identities=13%  Similarity=0.036  Sum_probs=197.0

Q ss_pred             ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh----hcCccee-eehhhHHHHHHHHHhhcccchhhHHHH--
Q psy15069         10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN----KYGCRNV-TICGAILGSACLAVSVFAKNVITLCIT--   82 (461)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~G~r~~-~~~g~~~~~~~~~l~~~~~~~~~l~i~--   82 (461)
                      +.|++...+|++....+.+--+.=+...+.||+.|...|    |+||||- +.++..+..++.++..++.++..++.-  
T Consensus        54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~  133 (498)
T KOG0637|consen   54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNE  133 (498)
T ss_pred             cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCc
Confidence            567888999999999998888877777788999999999    6898655 777888888888888887544322110  


Q ss_pred             ---------hhcccc-----ccccccchhHHHHHHhhh-hccc-hhhhhhhccchhhhHHHHhHHHHHHHHhhchhHH--
Q psy15069         83 ---------IGFGTG-----LGFGLIYLPAIVSVTCYF-ERLR-SLATGIAVCGSGLGTIIFAPIIDYTVREYGWKIT--  144 (461)
Q Consensus        83 ---------~~~l~G-----~g~~~~~~~~~~~~~~~f-~~~r-g~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~--  144 (461)
                               .-++.|     +..-....++-+.+.+.. ++++ -+|+++.....++|.+++-.++++    .||+-.  
T Consensus       134 ~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y----~~~~~~~~  209 (498)
T KOG0637|consen  134 RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY----LGLYKIFP  209 (498)
T ss_pred             ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc----cCceEEee
Confidence                     002223     333355667777888877 3333 239999988888888888777663    355433  


Q ss_pred             HHHHHHHHHHHHH---HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcc
Q psy15069        145 LLVLSVTVLSAVL---FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQ  221 (461)
Q Consensus       145 f~i~~~~~l~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (461)
                      |...-...+.+.-   +...-.+..+....+... ...+++++                                     
T Consensus       210 Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~-~~~~~~~s-------------------------------------  251 (498)
T KOG0637|consen  210 FTLTTACDLYCANLKLCFFLEVTLLLIETSESLW-YPQEKPLS-------------------------------------  251 (498)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhheecccccc-cccccCCC-------------------------------------
Confidence            2222222111111   111100100000000000 00000000                                     


Q ss_pred             ccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HH-hCCCc
Q psy15069        222 AQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQ-RGVTR  299 (461)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~s~  299 (461)
                      +++...+.  +..+              .....+.+..-....|..+.+++...+..++...+..|-.+++ ++ ++-++
T Consensus       252 ~~~~~~~~--~~~~--------------~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp  315 (498)
T KOG0637|consen  252 PKGTTARS--KSSK--------------LPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDP  315 (498)
T ss_pred             CCcccccc--cccC--------------cchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCC
Confidence            00000000  0000              0011111111112345677788888888887777776666666 32 22111


Q ss_pred             h----------------hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q psy15069        300 S----------------NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAG  363 (461)
Q Consensus       300 ~----------------~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (461)
                      .                .-.+=+.++.+...+.+...-++.+|+|-|+++......+  ++...+.....+.++......
T Consensus       316 ~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f--~~~~~~~gl~~~~~~~~~~~~  393 (498)
T KOG0637|consen  316 KADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAF--GLATGLAGLVLNTYVVLSHRS  393 (498)
T ss_pred             CCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHH--HHHHHHHhhhhhHHHHHHHHh
Confidence            1                1223344566777778889999999998555443322212  222222333444455544555


Q ss_pred             HHhhhhhhHHHHHHHHHHHhc---------------------C--ccchhHHHHHHHHHHHhhhhhccceeeeeecccCC
Q psy15069        364 VFGAMIGAYVGLTSVILVDLL---------------------G--LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS  420 (461)
Q Consensus       364 l~g~~~~~~~~~~~~~~~~~~---------------------~--~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~  420 (461)
                      ..|+-.+......+..+....                     .  ...+|...|+.|....+..++.....|.+.|..|+
T Consensus       394 ~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~  473 (498)
T KOG0637|consen  394 TAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGG  473 (498)
T ss_pred             hcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCC
Confidence            555444433333333222210                     1  12246667888888899999998888999998876


Q ss_pred             chHHHHHHhHHHHH
Q psy15069        421 YSPAFFLAGGAIFV  434 (461)
Q Consensus       421 ~~~~f~~~~~~~l~  434 (461)
                      -+.+-...++..++
T Consensus       474 ~~~~~~~~~a~s~~  487 (498)
T KOG0637|consen  474 GNLPAFVSGAVALL  487 (498)
T ss_pred             cchhHHHHHHHHHH
Confidence            66555444444443

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.58  E-value=7.7e-07  Score=80.54  Aligned_cols=163  Identities=13%  Similarity=0.068  Sum_probs=110.3

Q ss_pred             HhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh--h--
Q psy15069        277 TSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF--C--  352 (461)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~--  352 (461)
                      .....|.+..|-|..-+++|+|+++...+.+...++..+| ++.|.+.||++  +...+.++.+...++......  .  
T Consensus        14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~g--p~~~l~iG~~~~~~GY~~~~l~~~~~   90 (250)
T PF06813_consen   14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFG--PWVVLLIGAVLGFVGYGLLWLAVSGR   90 (250)
T ss_pred             hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            3445688888999988999999999999999989998765 88999999954  444444454444444333322  1  


Q ss_pred             ---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069        353 ---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG  429 (461)
Q Consensus       353 ---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~  429 (461)
                         .+.|.+.+..++.|.+.............+.|| ++||++.|+.-...++++++-..+...+.+.  +....+.+.+
T Consensus        91 i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~--~~~~fll~la  167 (250)
T PF06813_consen   91 IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD--DPSSFLLFLA  167 (250)
T ss_pred             cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC--ChHHHHHHHH
Confidence               245666666666666665555555556678898 6899999999999999988877776666553  3344444444


Q ss_pred             HHHH-HHHHHHHHHHHh
Q psy15069        430 GAIF-VSGVMLFVIPSL  445 (461)
Q Consensus       430 ~~~l-~~~~~~~~~~~~  445 (461)
                      .... ++.+..++++..
T Consensus       168 ~~~~~v~l~~~~~vr~~  184 (250)
T PF06813_consen  168 VLPAVVCLVAMFFVRPV  184 (250)
T ss_pred             HHHHHHHHHHhhheecc
Confidence            4433 333444444444

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=98.51  E-value=5.9e-07  Score=84.32  Aligned_cols=145  Identities=19%  Similarity=0.242  Sum_probs=116.0

Q ss_pred             eehHHHHhHhcCCC--ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccc--hhhHHHHhh
Q psy15069          9 ILFIEFTKVFQEGD--GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKN--VITLCITIG   84 (461)
Q Consensus         9 ~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~--~~~l~i~~~   84 (461)
                      ...+.+..+++.+.  ...+++.+.+.+...+++++.|.+.||+|||+.+..+.....++.++..+..+  .+.+++ .|
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  101 (338)
T COG0477          23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLI-LR  101 (338)
T ss_pred             HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHH-HH
Confidence            35666677777766  58999999999999999999999999999998888888766666666767666  677776 48


Q ss_pred             ccccccccccchhHHHHHHhhhhc--cchhhhhhhcc-chhhhHHHHhHHHHHHHHh--hchhHHHHHHHHHHHH
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFER--LRSLATGIAVC-GSGLGTIIFAPIIDYTVRE--YGWKITLLVLSVTVLS  154 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~~--~rg~a~gi~~~-~~~lg~~i~~~l~~~l~~~--~gw~~~f~i~~~~~l~  154 (461)
                      +..|++.+...+....++.+++|+  +|+...++... ...+|.+++|.+++.+...  .+||..|.+.......
T Consensus       102 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (338)
T COG0477         102 LLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL  176 (338)
T ss_pred             HHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            889999998888899999999985  88999998888 5888888888777766653  5899966666555443

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.51  E-value=3.6e-06  Score=87.21  Aligned_cols=154  Identities=15%  Similarity=0.074  Sum_probs=123.3

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh-hcCcceeeehhhHHHHHHHHHhhcccc--------hhhH
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN-KYGCRNVTICGAILGSACLAVSVFAKN--------VITL   79 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-r~G~r~~~~~g~~~~~~~~~l~~~~~~--------~~~l   79 (461)
                      ++..++.+.+|.+.+....++..+.....+...+.|.++| ++|+++.+..+.++..++..+.++...        ....
T Consensus         9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~   88 (654)
T TIGR00926         9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD   88 (654)
T ss_pred             HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence            4566778889999999999999998888899999999999 689999999999999999988776421        1123


Q ss_pred             HHHhhccccccccccchhHHHHHHhhhh-c---cchhhhhhhccchhhhHHHHhHHHHHHHHhh-------chhHHHHHH
Q psy15069         80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-R---LRSLATGIAVCGSGLGTIIFAPIIDYTVREY-------GWKITLLVL  148 (461)
Q Consensus        80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~---~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-------gw~~~f~i~  148 (461)
                      ++++ .+.++|.|.+-++..+...+-++ +   +|.....+.+.+.++|.++++++...+.+.+       +|...|.+.
T Consensus        89 l~gL-aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~  167 (654)
T TIGR00926        89 LLGL-ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP  167 (654)
T ss_pred             HHHH-HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence            3332 56678888888888888888773 2   3677889999999999999999999887544       699999999


Q ss_pred             HHHHHHHHHHHhhcc
Q psy15069        149 SVTVLSAVLFGILLR  163 (461)
Q Consensus       149 ~~~~l~~~i~~~~~~  163 (461)
                      ++.+++..+..+..+
T Consensus       168 ~i~m~ia~lvf~~g~  182 (654)
T TIGR00926       168 AILMILALIVFMAGS  182 (654)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            998888776655543

>PRK09848 glucuronide transporter; Provisional

Probab=98.50  E-value=9.1e-07  Score=88.82  Aligned_cols=145  Identities=12%  Similarity=0.134  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC----CcchhHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP----CVNRLYIYNGCLAIC  342 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----~~~~~~~~~~~~~~~  342 (461)
                      +...++.+...........+++.|+ +..|++..++|.+.++..+...+..++.|+++||.    |+||.++...+....
T Consensus        11 ~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~   90 (448)
T PRK09848         11 VGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLM   90 (448)
T ss_pred             HhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHH
Confidence            3344455555555556667777788 56799999999999999999999999999999996    444444333322222


Q ss_pred             HHHHHHhhh----hh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHH-----Hhhhhhccce
Q psy15069        343 GAATVICAF----CY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQ-----GIASLVGPPI  410 (461)
Q Consensus       343 ~~~~~~~~~----~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~-----~~g~~~gp~i  410 (461)
                      ..+.+++..    ..  ..+.......+.+++.+...+...++..++.. +++|.+..+......     .++..++|.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i  170 (448)
T PRK09848         91 IFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSI  170 (448)
T ss_pred             HHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222222211    11  12233344456777777777666666666654 356777666554332     2445556665


Q ss_pred             ee
Q psy15069        411 AG  412 (461)
Q Consensus       411 ~g  412 (461)
                      .+
T Consensus       171 ~~  172 (448)
T PRK09848        171 KN  172 (448)
T ss_pred             HH
Confidence            54

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.49  E-value=2.1e-06  Score=81.81  Aligned_cols=155  Identities=17%  Similarity=0.116  Sum_probs=108.6

Q ss_pred             HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCC----cchhHHHHHHHHHHHHHHHHhhh-----hh-------hH-
Q psy15069        293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPC----VNRLYIYNGCLAICGAATVICAF-----CY-------NY-  355 (461)
Q Consensus       293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~-------~~-  355 (461)
                      .|++++....+.+.+...+... .++.+|+.+|+.+    .||...+..+.+....+..+.++     ..       +. 
T Consensus         8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~   86 (403)
T PF03209_consen    8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW   86 (403)
T ss_pred             HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence            7899999999999888888776 6999999999853    35555555555554444433332     12       11 


Q ss_pred             -H--HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHH
Q psy15069        356 -V--ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAI  432 (461)
Q Consensus       356 -~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~  432 (461)
                       +  ...+.+.++|++.+.......+++.|..|+++|+++.++...+.-+|.+++..+.|.+.|.. +..-..-+.....
T Consensus        87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~-s~~rL~~v~~~~a  165 (403)
T PF03209_consen   87 LGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF-SPERLIQVIQGVA  165 (403)
T ss_pred             HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc-CHHHHHHHHHHHH
Confidence             1  23345678899999888999999999999999999999999999999999999999998865 3433333333333


Q ss_pred             HHHHHH-HHHHHHhhHhH
Q psy15069        433 FVSGVM-LFVIPSLQSYL  449 (461)
Q Consensus       433 l~~~~~-~~~~~~~~~~~  449 (461)
                      ++...+ ...+.+.+++.
T Consensus       166 ~i~~~l~~ia~wg~E~r~  183 (403)
T PF03209_consen  166 LIALLLNLIALWGQEPRR  183 (403)
T ss_pred             HHHHHHHHHHHHhcccCC
Confidence            333333 33334444333

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG3574|consensus

Probab=98.48  E-value=4.2e-06  Score=78.13  Aligned_cols=332  Identities=11%  Similarity=0.028  Sum_probs=184.4

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh-----hcCccee-eehhhHHHHHHHHHhhcc---------
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN-----KYGCRNV-TICGAILGSACLAVSVFA---------   73 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~G~r~~-~~~g~~~~~~~~~l~~~~---------   73 (461)
                      -..|.+.+.=|.|.++.+ ++|.....+.+ -+...+++|     |+||||. ++-+..+.+..+++.+..         
T Consensus        51 ~~iP~lL~ak~vSyt~~a-~fS~ay~P~sL-KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng  128 (510)
T KOG3574|consen   51 GAIPLLLQAKGVSYTSQA-IFSFAYWPFSL-KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNG  128 (510)
T ss_pred             hhhHHHhcCCCcchhhhh-hhhhhhhHHHH-HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCC
Confidence            367888887888888888 56666666643 667888888     9999887 333334433333333322         


Q ss_pred             --cchhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH-----hh--chh-
Q psy15069         74 --KNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-----EY--GWK-  142 (461)
Q Consensus        74 --~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-----~~--gw~-  142 (461)
                        ++...+...+ ++.=+..++-..+.-.+.-... |++.|-|......|...|.+++..+.-.+-.     +|  +|. 
T Consensus       129 ~~p~v~~lt~~f-~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~  207 (510)
T KOG3574|consen  129 GLPNVVALTLLF-LLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPL  207 (510)
T ss_pred             CCcchHHHHHHH-HHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcC
Confidence              2222332222 3334444544444433333333 6788888887777878887776554333221     11  232 


Q ss_pred             --------HHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCC
Q psy15069        143 --------ITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGP  214 (461)
Q Consensus       143 --------~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (461)
                              ..+++.|.+.++.-.+..+...+++...+|+.                                        
T Consensus       208 ~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~----------------------------------------  247 (510)
T KOG3574|consen  208 DQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEEL----------------------------------------  247 (510)
T ss_pred             ccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhh----------------------------------------
Confidence                    34556666666555544444322211100000                                        


Q ss_pred             cccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH
Q psy15069        215 TEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ  294 (461)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (461)
                                          |.        ...+..+.+.     +.++-|....++......-.++.+-....+.-+-|
T Consensus       248 --------------------~~--------~i~~~yk~l~-----~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle  294 (510)
T KOG3574|consen  248 --------------------EL--------GIHESYKLLR-----DVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE  294 (510)
T ss_pred             --------------------hc--------CHHHHHHHHH-----HHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH
Confidence                                00        0011112222     34555655555555555556666666677777789


Q ss_pred             hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchh------HHHHHHHHHHH-HHHHHhhhh-h-------hHHHHH
Q psy15069        295 RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRL------YIYNGCLAICG-AATVICAFC-Y-------NYVELA  359 (461)
Q Consensus       295 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~------~~~~~~~~~~~-~~~~~~~~~-~-------~~~~~~  359 (461)
                      .|++..+.+++..+.--.+++.....|++..+  .++.      ..+-+...... +.....+.. .       .+..+.
T Consensus       295 ~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~  372 (510)
T KOG3574|consen  295 HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILL  372 (510)
T ss_pred             cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHH
Confidence            99999998887655555566666666666653  2221      11212222222 222222211 1       122222


Q ss_pred             H-HHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069        360 I-YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST  418 (461)
Q Consensus       360 ~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~  418 (461)
                      + .-.+.+......+...++..+++.++.--|+.+.+.|+..++|+--=..+++++.|..
T Consensus       373 i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l  432 (510)
T KOG3574|consen  373 ITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL  432 (510)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence            2 2244555555566667778899999999999999999999999887777777777753

>KOG3762|consensus

Probab=98.45  E-value=7.4e-07  Score=86.85  Aligned_cols=148  Identities=17%  Similarity=0.163  Sum_probs=125.9

Q ss_pred             HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069         15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI   94 (461)
Q Consensus        15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~   94 (461)
                      .+|.+-.+.-.|.+-.+...+=.+.=++++++++|+|+-+++..++.+..+=++..++..|.|..+. +-+++|+-.+.+
T Consensus       398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLP-ieilqgit~ali  476 (618)
T KOG3762|consen  398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLP-IEILQGITHALI  476 (618)
T ss_pred             HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheee-HHHHHHHHHHHH
Confidence            5677777777886666666666777888999999999999999999999999999999999999998 489999999999


Q ss_pred             chhHHHHHHhhh-hccchhhhhhhccc-hhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069         95 YLPAIVSVTCYF-ERLRSLATGIAVCG-SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR  163 (461)
Q Consensus        95 ~~~~~~~~~~~f-~~~rg~a~gi~~~~-~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~  163 (461)
                      |.+..+++++.. |+-|..+-++.+.. .++|--+|..|++.+.+.+|-|.+|.+.++.+++..++.....
T Consensus       477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq  547 (618)
T KOG3762|consen  477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ  547 (618)
T ss_pred             HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999988 46688887777653 6677777888889999999999999999999998876655543

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=98.36  E-value=6.9e-06  Score=77.11  Aligned_cols=165  Identities=15%  Similarity=0.090  Sum_probs=110.3

Q ss_pred             HhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHH
Q psy15069        277 TSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYV  356 (461)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (461)
                      ...+-+.-.+|+-...+++|++..+++.++....+...+..++.|.++||+|+|+.-+  ..+++.+++.+ .-..++++
T Consensus        46 a~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl--~~cily~~scl-~k~~~~~~  122 (354)
T PF05631_consen   46 AMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACL--LFCILYSLSCL-TKHSSNYP  122 (354)
T ss_pred             HHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHH--HHHHHHHHHHH-HHhccccH
Confidence            3444444445554555889999999999999999999999999999999988666544  33444444443 34567899


Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHH-HHHh----cCccchhHHHHHHHH-HHHhhhhhccceeeeeecccC-CchHHHHHHh
Q psy15069        357 ELAIYAGVFGAMIGAYVGLTSVI-LVDL----LGLDRLTNAFGLLLL-FQGIASLVGPPIAGFLYDSTL-SYSPAFFLAG  429 (461)
Q Consensus       357 ~~~~~~~l~g~~~~~~~~~~~~~-~~~~----~~~~~~~~~~g~~~~-~~~~g~~~gp~i~g~l~~~~g-~~~~~f~~~~  429 (461)
                      .+++.+++-|++....+...-+. +.|.    +|++..+...+.... ..++-.+.+..++-++.|..+ +...+|....
T Consensus       123 ~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~  202 (354)
T PF05631_consen  123 VLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAI  202 (354)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHH
Confidence            99999999999999888887764 3443    343434444444432 223334445555556666654 2467888877


Q ss_pred             HHHHHHHHHHHHHHH
Q psy15069        430 GAIFVSGVMLFVIPS  444 (461)
Q Consensus       430 ~~~l~~~~~~~~~~~  444 (461)
                      .+.+++.++....++
T Consensus       203 ~~l~~~~~~I~~~W~  217 (354)
T PF05631_consen  203 VLLAVAAVLILKTWP  217 (354)
T ss_pred             HHHHHHHHHHHhccc
Confidence            777777665544333

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=98.35  E-value=8.3e-05  Score=72.47  Aligned_cols=155  Identities=15%  Similarity=0.089  Sum_probs=94.3

Q ss_pred             ccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcch--------
Q psy15069        260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNR--------  331 (461)
Q Consensus       260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~--------  331 (461)
                      +++|.|.+..+.+..+..-.++..--.....-+-+.|++.++.+.+..+..-.+++..+..|+++.-  .++        
T Consensus       273 ~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws~g--~~P~~~~~~~l  350 (544)
T PF13000_consen  273 KILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWSAG--SPPLDVDNKAL  350 (544)
T ss_pred             HHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcC--CCccccccccc
Confidence            4678888877777777777887777777777778999999998887666555555555555555442  221        


Q ss_pred             -------------------hHHHHHHHH---HHHH-HHHHhhhhh-------hHHHHHHHH-HHHhhhhhhHHHHHHHHH
Q psy15069        332 -------------------LYIYNGCLA---ICGA-ATVICAFCY-------NYVELAIYA-GVFGAMIGAYVGLTSVIL  380 (461)
Q Consensus       332 -------------------~~~~~~~~~---~~~~-~~~~~~~~~-------~~~~~~~~~-~l~g~~~~~~~~~~~~~~  380 (461)
                                         ......++.   +.++ ..+.....+       .+..+++.. ++.-+.....+....+.-
T Consensus       351 ~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFh  430 (544)
T PF13000_consen  351 PNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFH  430 (544)
T ss_pred             cccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                               011111111   1111 111111111       122222222 344455556777777888


Q ss_pred             HHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069        381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~  416 (461)
                      +++.+|.-=|+.+.+.|+..++|+---..+.=++.|
T Consensus       431 arISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD  466 (544)
T PF13000_consen  431 ARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD  466 (544)
T ss_pred             hhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence            999999999999999999999997655544444444

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.33  E-value=3.4e-06  Score=82.60  Aligned_cols=173  Identities=11%  Similarity=0.124  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC----CcchhHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP----CVNRLYIYNGCLAIC  342 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----~~~~~~~~~~~~~~~  342 (461)
                      .....+.+..+........|+..|+ +..|+++..+|.++.+.=+...+.-|+.|.+.||.    |++|-+++ .+.+..
T Consensus        15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL-~g~ip~   93 (467)
T COG2211          15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLL-WGAIPF   93 (467)
T ss_pred             HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHH-HHhHHH
Confidence            3345555556666667778888888 78899999999999999999999999999999964    54455544 333333


Q ss_pred             HHHHHHhhhhh------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069        343 GAATVICAFCY------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQGIASLVGPPIAGFLY  415 (461)
Q Consensus       343 ~~~~~~~~~~~------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~  415 (461)
                      ++...+...++      +.....+.-.++++++........++..++.+ +++|.+..+.-..+..+|..+-..+.+.+.
T Consensus        94 ~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv  173 (467)
T COG2211          94 AIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV  173 (467)
T ss_pred             HHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44333333333      23344455678888888877777788888875 578999999999999998777666666555


Q ss_pred             cccC------CchHHHHHHhHHHHHHHHHHHH
Q psy15069        416 DSTL------SYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       416 ~~~g------~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      ...|      +|...-.+.+++.++..+.++.
T Consensus       174 ~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~  205 (467)
T COG2211         174 KLFGGGDKALGYQGTALVLGVIGVILLLFCFF  205 (467)
T ss_pred             HHhCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            4332      2444444444444444444443

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.31  E-value=8.8e-06  Score=80.94  Aligned_cols=151  Identities=13%  Similarity=0.099  Sum_probs=112.8

Q ss_pred             HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC---CcchhHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHH
Q psy15069        293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP---CVNRLYIYNGCLAICGAATVICAFC----YNYVELAIYAGVF  365 (461)
Q Consensus       293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~  365 (461)
                      +++|+++.+.....+...+.-. .+++.|.++|-+   |.||+..+.++.++..+..+.+...    .+.....++.++.
T Consensus        18 ~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la   96 (433)
T PF03092_consen   18 DDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLA   96 (433)
T ss_pred             HHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHH
Confidence            7899999999888777777665 788999999974   6778777666666664444433332    2455556666777


Q ss_pred             hhhhhhHHHHHHHHHHHhcC--ccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        366 GAMIGAYVGLTSVILVDLLG--LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       366 g~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      .++........-+++.|...  ++.+|...+.......+|++++..+.|.+.+.. +++..|.+.+.+.++..+..+++.
T Consensus        97 ~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~~  175 (433)
T PF03092_consen   97 SFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFLL  175 (433)
T ss_pred             HHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHhh
Confidence            78888888888888877763  234778888888899999999999999999986 588888888877777766555554


Q ss_pred             Hh
Q psy15069        444 SL  445 (461)
Q Consensus       444 ~~  445 (461)
                      ++
T Consensus       176 ~e  177 (433)
T PF03092_consen  176 EE  177 (433)
T ss_pred             hh
Confidence            43

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG0253|consensus

Probab=98.31  E-value=2.9e-06  Score=79.04  Aligned_cols=151  Identities=16%  Similarity=0.201  Sum_probs=120.7

Q ss_pred             HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhH
Q psy15069        293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAY  372 (461)
Q Consensus       293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  372 (461)
                      ...|.+..+.+++......+..+++..+|.++|++|+|+..  ...+...++.-.+....+++.++.++..+.|++.|. 
T Consensus       106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f--~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-  182 (528)
T KOG0253|consen  106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGF--NLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-  182 (528)
T ss_pred             hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhh--hhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-
Confidence            56789999999999999999999999999999997766543  345555566666677788999999999999999998 


Q ss_pred             HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069        373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSY  448 (461)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~  448 (461)
                      .|...++-.|..|..+|..-.=+. ....+|.++...++=..+...| |++..........+.+.+++.+++..|.
T Consensus       183 ~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g-wr~~l~~~~~pl~~~a~f~~w~~ESpRf  256 (528)
T KOG0253|consen  183 LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG-WRYLLFTSSTPLMFAARFLVWVYESPRF  256 (528)
T ss_pred             ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHhHHHHHHHHHhhcccCcch
Confidence            888888889999988888766665 7778888887777655666665 9999888888777777777776655443

>KOG4686|consensus

Probab=98.31  E-value=1.3e-06  Score=78.24  Aligned_cols=140  Identities=18%  Similarity=0.179  Sum_probs=94.8

Q ss_pred             HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhh-HHHHHHHHHhhcccchhhHHHHhhccccccc
Q psy15069         13 EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA-ILGSACLAVSVFAKNVITLCITIGFGTGLGF   91 (461)
Q Consensus        13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~-~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~   91 (461)
                      .+++++|+|+...+-+.|.-.......+|+.|.+.||+|++...+++. +...++-.+..|.  ++.-+.. ..+.|+..
T Consensus       290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~-m~~lGLsy  366 (459)
T KOG4686|consen  290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTS-MTFLGLSY  366 (459)
T ss_pred             HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHH-HHHHhhhH
Confidence            468899999999999999999999999999999999999998765544 4444444444443  2222222 23344443


Q ss_pred             cccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh---chhHHHH-HHHHHHHHH
Q psy15069         92 GLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY---GWKITLL-VLSVTVLSA  155 (461)
Q Consensus        92 ~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~---gw~~~f~-i~~~~~l~~  155 (461)
                      +.....-...+....| ++.|.+.|..++..++|-.+.|.+++.+.+.-   .|--.|+ +++.+.+..
T Consensus       367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~s  435 (459)
T KOG4686|consen  367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTS  435 (459)
T ss_pred             HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHH
Confidence            3322212223333344 67899999999999999999999999998753   3544444 444444443

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.29  E-value=3.7e-06  Score=87.20  Aligned_cols=162  Identities=12%  Similarity=0.049  Sum_probs=118.6

Q ss_pred             ccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh-----
Q psy15069        280 GFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY-----  353 (461)
Q Consensus       280 ~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  353 (461)
                      ++|++...+..|+ +.+|++...+..++..+....-+...++|+++|++ .++...+..+.++..++..++.+..     
T Consensus         2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~-lG~~~tIl~~~ii~~lG~~llai~a~~~~~   80 (654)
T TIGR00926         2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGW-LGKFKTILYLSIVYVVGHALLSFGAIPSSG   80 (654)
T ss_pred             ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence            5667777777777 67899999999999988888888999999999984 2333333334444444444433321     


Q ss_pred             ---hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc---chhHHHHHHHHHHHhhhhhccceeeeeeccc---C---Cc
Q psy15069        354 ---NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD---RLTNAFGLLLLFQGIASLVGPPIAGFLYDST---L---SY  421 (461)
Q Consensus       354 ---~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~---g---~~  421 (461)
                         .....++...+..+|.|..-|...+...|.++++   ++.+.+.+...+.++|+.+++++.+++.+..   |   +|
T Consensus        81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~  160 (654)
T TIGR00926        81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCY  160 (654)
T ss_pred             cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcch
Confidence               1223456677788889999999999999998754   4777889999999999999999999887443   2   48


Q ss_pred             hHHHHHHhHHHHHHHHHHHHH
Q psy15069        422 SPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       422 ~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      ...|.+.+++.+++.++...-
T Consensus       161 ~~aF~i~~i~m~ia~lvf~~g  181 (654)
T TIGR00926       161 PLAFGVPAILMILALIVFMAG  181 (654)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            889988888888877766543

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=98.28  E-value=0.00017  Score=71.71  Aligned_cols=114  Identities=9%  Similarity=-0.040  Sum_probs=82.3

Q ss_pred             ccHHHHHHHHHHhhhhh-hHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc----cc----------------------
Q psy15069         23 GVTSWIASILVGVTLCS-GPISSAFVNKYGCRNVTICGAILGSACLAVSVFA----KN----------------------   75 (461)
Q Consensus        23 ~~~~~~~s~~~~~~~~~-~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~----~~----------------------   75 (461)
                      ..+.++.+...+.+.+. .++.+.+.+|++|+++.-.....+.+.+.+.++.    ++                      
T Consensus        43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~  122 (472)
T TIGR00769        43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF  122 (472)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence            57999999888877666 9999999999999999888888877777776554    11                      


Q ss_pred             -----hhhHHHHhhccccccccccch-hHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH
Q psy15069         76 -----VITLCITIGFGTGLGFGLIYL-PAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR  137 (461)
Q Consensus        76 -----~~~l~i~~~~l~G~g~~~~~~-~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~  137 (461)
                           .|...+.+ +...+-...+.. .-...++|.+ +++-.|-.++...+.++|.++++.+..++.+
T Consensus       123 i~~~~~W~~~~FY-v~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~  190 (472)
T TIGR00769       123 IAILRIWSFALFY-VMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK  190 (472)
T ss_pred             HHHHhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 12111111 222332222222 3346778877 5778889999999999999999999998873

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=98.25  E-value=7.1e-07  Score=65.51  Aligned_cols=76  Identities=13%  Similarity=0.077  Sum_probs=71.4

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHH
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLC   80 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~   80 (461)
                      .+|..++|.|++|.++|.++.|++.+.++++|.++.+...++.++..+++++..+.+...++++.+++.++++.+.
T Consensus         9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~   84 (85)
T PF06779_consen    9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS   84 (85)
T ss_pred             HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence            5678899999999999999999999999999999999999999999999999999999999999999999887654

Note that many members are hypothetical proteins.

>PF12832 MFS_1_like: MFS_1 like family

Probab=98.21  E-value=2e-06  Score=62.64  Aligned_cols=66  Identities=14%  Similarity=0.236  Sum_probs=58.0

Q ss_pred             HHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHH
Q psy15069        269 LFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYI  334 (461)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~  334 (461)
                      .+-..+++.+.+...+.+++|.|+++.|+++.++|.+.++..+..+++.+++|+++||.++++..+
T Consensus         4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l   69 (77)
T PF12832_consen    4 PLKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVIL   69 (77)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHH
Confidence            355667778888889999999999999999999999999999999999999999999986655544

>KOG3880|consensus

Probab=98.17  E-value=3.9e-05  Score=69.69  Aligned_cols=325  Identities=13%  Similarity=0.041  Sum_probs=175.2

Q ss_pred             HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHh
Q psy15069         25 TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTC  104 (461)
Q Consensus        25 ~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~  104 (461)
                      +|.+.-.-.+...+..+.+....||+.--.=.....++.+.++.+.+++++.++-++.. .+..++.|..-..-..+ +.
T Consensus        64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV-~~aSissGlGEiTFL~l-ss  141 (409)
T KOG3880|consen   64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGV-VFASISSGLGEITFLAL-SS  141 (409)
T ss_pred             cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhh-hhhhhcCCcceeehhhh-hc
Confidence            66777777888888888888889988765556677788888999999999988877642 55666666543333232 22


Q ss_pred             hhhccchhhhhhhccchhhhHHHHhHHHHHHHHh--hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcc
Q psy15069        105 YFERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHL  182 (461)
Q Consensus       105 ~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  182 (461)
                         ++......-+.+|.+.++++|..--..+.+.  ..-|.+.++.-.+.++..+.-+++++.++....  +.  ..|+.
T Consensus       142 ---~Y~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~--pt--l~~~~  214 (409)
T KOG3880|consen  142 ---RYPSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYS--PT--LQPST  214 (409)
T ss_pred             ---cCCCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccC--CC--cCccc
Confidence               2334455667788888888887766666653  356888888777766666665565555433221  00  00000


Q ss_pred             cccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccc
Q psy15069        183 RIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELL  262 (461)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  262 (461)
                                  +                     ..+++         .+..|..++++-.+.....+.+++.+  ++++
T Consensus       215 ------------~---------------------~~~~~---------~~~~~a~e~~sv~s~~~~~~e~~~~i--~pll  250 (409)
T KOG3880|consen  215 ------------E---------------------IIPSQ---------YLPFEAAEEKSVPSRRLGLKETLKRI--KPLL  250 (409)
T ss_pred             ------------e---------------------eccCC---------CCcccccccccCchhhhcHHHHHHHH--HHHH
Confidence                        0                     00000         00000000000000001111222111  0112


Q ss_pred             cchhHHHHHHHHHHHhhccccchhhHhhHH-H-HhCCC--c-hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHH--
Q psy15069        263 RDPIFILFTISNIFTSIGFNVPYVYIVKLA-E-QRGVT--R-SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIY--  335 (461)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~s--~-~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~--  335 (461)
                      +  ...-+...++.-++..-+   ..+..+ . ..|.+  . .|.-|....+.++.++.|--.-. ..   .+..+.+  
T Consensus       251 ~--~MvPL~~VY~~EY~INQG---l~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~-~~---~p~l~~Lai  321 (409)
T KOG3880|consen  251 K--YMVPLALVYFAEYFINQG---LAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISRSSINL-FT---MPYLWLLAI  321 (409)
T ss_pred             H--HHHHHHHHHHHHHHHhhh---hHhhEEeccccCCccchhhcchhhheeeeeeEEEEeccceE-Ee---chHHHHHHH
Confidence            1  112233333333333222   222222 1 23332  2 23556666777776665532111 11   1222221  


Q ss_pred             -HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069        336 -NGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA  411 (461)
Q Consensus       336 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~  411 (461)
                       ...-++..+.-.++.+++++|...+..+.-|+..|..+....--+.+-.++++|--+++.....-.+|-.++..++
T Consensus       322 lQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la  398 (409)
T KOG3880|consen  322 LQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA  398 (409)
T ss_pred             HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence             1111222223344556788888888888899988887777777777777889999999988777666666655543

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=98.10  E-value=5.5e-07  Score=91.48  Aligned_cols=178  Identities=13%  Similarity=0.173  Sum_probs=2.9

Q ss_pred             HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069        270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC  349 (461)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  349 (461)
                      +++..+++......+...+.++.+.++++.++.|++.+.+-++.++..++..++.+|. .|+++ +..+.++++++.+++
T Consensus         8 ~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprw-ig~g~~~~~~g~~l~   85 (539)
T PF03137_consen    8 LCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRW-IGIGALLMGLGSLLF   85 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcce-eeecHHHHHHHHHHH
Confidence            4444555533333344456666688999999999999999999999999999999983 44444 345555656555443


Q ss_pred             hhhh--------------------------------------------------hHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy15069        350 AFCY--------------------------------------------------NYVELAIYAGVFGAMIGAYVGLTSVI  379 (461)
Q Consensus       350 ~~~~--------------------------------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~  379 (461)
                      .+-+                                                  -++.+++..++.|+|....+++..++
T Consensus        86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY  165 (539)
T PF03137_consen   86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY  165 (539)
T ss_dssp             ------------------------------------------------------------------SSS-----------
T ss_pred             hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence            2100                                                  01234556688999999999999999


Q ss_pred             HHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc---------------------cCCchHHHHHHhHHHHHHHHH
Q psy15069        380 LVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS---------------------TLSYSPAFFLAGGAIFVSGVM  438 (461)
Q Consensus       380 ~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~---------------------~g~~~~~f~~~~~~~l~~~~~  438 (461)
                      +-|.+++++.+...|+......+|-++|-.++|...+.                     .|.|...|++.+++.++.++.
T Consensus       166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip  245 (539)
T PF03137_consen  166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP  245 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999888888866521                     345888899999988888888


Q ss_pred             HHHHHHhhHhH
Q psy15069        439 LFVIPSLQSYL  449 (461)
Q Consensus       439 ~~~~~~~~~~~  449 (461)
                      ++..|+.-++.
T Consensus       246 l~~FPk~lp~~  256 (539)
T PF03137_consen  246 LFFFPKKLPGT  256 (539)
T ss_dssp             -----------
T ss_pred             HHcCCccCCCc
Confidence            77777654443

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=98.06  E-value=0.0003  Score=69.78  Aligned_cols=144  Identities=13%  Similarity=0.089  Sum_probs=84.3

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHH--HhCCCch-hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH--
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAE--QRGVTRS-NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA--  340 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~s~~-~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~--  340 (461)
                      +.|...+..++.++....+++-.....+  +.+.+.. ..-..+.+++++..+||.+..+..= .+.+.+++...++.  
T Consensus       270 ki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~  348 (437)
T TIGR00939       270 KVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRV  348 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHH
Confidence            3555555555544443333322211111  1223333 4456777899999999997654321 11221222222211  


Q ss_pred             HHHHHHHHhh---------hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccce
Q psy15069        341 ICGAATVICA---------FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPI  410 (461)
Q Consensus       341 ~~~~~~~~~~---------~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i  410 (461)
                      +..-.++++.         +.++-+..++..+++|+..|-..++...+..+..++++|..+..++..+-.+|-.+|..+
T Consensus       349 iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l  427 (437)
T TIGR00939       349 LFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL  427 (437)
T ss_pred             HHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111111211         123556677789999999998888888888888988888888888888888887777654

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=98.01  E-value=0.00029  Score=65.78  Aligned_cols=153  Identities=20%  Similarity=0.191  Sum_probs=107.1

Q ss_pred             hhccccchhhHhhHHHHhCCCc--hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh-
Q psy15069        278 SIGFNVPYVYIVKLAEQRGVTR--SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN-  354 (461)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  354 (461)
                      ...........+.+..+.+.+.  ...++..+...+...++.++.|++.||.|+|+........  ..+..+...+..+ 
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--~~~~~~~~~~~~~~   92 (338)
T COG0477          15 GLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLL--FLLGTLLLALAPNV   92 (338)
T ss_pred             HHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHH--HHHHHHHHHhCccc
Confidence            3444455556677777766665  4788899999999999999999999998666443332221  2222333333333 


Q ss_pred             -HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc-cchhHHHHHHHH-HHHhhhhhccceeeeeecc-cCCchHHHHHHhH
Q psy15069        355 -YVELAIYAGVFGAMIGAYVGLTSVILVDLLGL-DRLTNAFGLLLL-FQGIASLVGPPIAGFLYDS-TLSYSPAFFLAGG  430 (461)
Q Consensus       355 -~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~-~~~~g~~~gp~i~g~l~~~-~g~~~~~f~~~~~  430 (461)
                       .+.+++..+..|++.+...+....++.+..|+ ++++...+.... ...++..++|.+++.+.+. ...|+..|.....
T Consensus        93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (338)
T COG0477          93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL  172 (338)
T ss_pred             hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence             66777777778999999999999999999987 578888888888 5778888888777777654 2247775554444


Q ss_pred             HH
Q psy15069        431 AI  432 (461)
Q Consensus       431 ~~  432 (461)
                      ..
T Consensus       173 ~~  174 (338)
T COG0477         173 LG  174 (338)
T ss_pred             HH
Confidence            43

>KOG2563|consensus

Probab=97.85  E-value=0.00016  Score=69.69  Aligned_cols=121  Identities=17%  Similarity=0.043  Sum_probs=85.5

Q ss_pred             hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh-----hh-hHH--HHHHHHHHHh
Q psy15069        295 RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF-----CY-NYV--ELAIYAGVFG  366 (461)
Q Consensus       295 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~--~~~~~~~l~g  366 (461)
                      +| +...+-++..++.+.++.-.+.+-|+.||+|.|....  ++....+++..+=..     .+ ..+  .......+.+
T Consensus        75 Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l--lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa  151 (480)
T KOG2563|consen   75 YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALL--LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAA  151 (480)
T ss_pred             hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHH--HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHH
Confidence            45 6667778888899999999999999999977665544  444444444333221     22 233  3445556666


Q ss_pred             hhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069        367 AMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST  418 (461)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~  418 (461)
                      ..+-....+..-+..-++|+++|+.+..+..+...+|.++|-.+...+..+.
T Consensus       152 ~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~  203 (480)
T KOG2563|consen  152 AAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS  203 (480)
T ss_pred             HhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence            6666666666677888999999999999999888888888877777776543

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=97.83  E-value=0.00045  Score=68.73  Aligned_cols=147  Identities=10%  Similarity=-0.022  Sum_probs=91.4

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCC-----CchhhHHHHHHHhhhhhhh-hhhhhhccCCCCcchhHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGV-----TRSNASSLISIVGAANMVS-RVILGYISDRPCVNRLYIYNGC  338 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~~~~~~~~~~~~~~g-~~~~g~l~dr~~~~~~~~~~~~  338 (461)
                      |+++...+..|+..+.++..-..-    |...+     ......++.+..-+...+. .++.+++++|+++++.......
T Consensus         7 ~k~~~~~l~fF~il~~Y~iLR~lK----D~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~   82 (472)
T TIGR00769         7 KKFLPLFLMFFCILFNYTILRDTK----DTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS   82 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhh----hheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence            356667777777776664433322    33333     3356777777666665555 8889999999766655433332


Q ss_pred             HHHHHHHHHHhh---hhhh--------------------------HHHHHHHHHHHhhhhhhHHH-HHHHHHHHhcCccc
Q psy15069        339 LAICGAATVICA---FCYN--------------------------YVELAIYAGVFGAMIGAYVG-LTSVILVDLLGLDR  388 (461)
Q Consensus       339 ~~~~~~~~~~~~---~~~~--------------------------~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~  388 (461)
                      ..+....++.+.   ..+.                          .|...++-+..-+......+ +.+..+.|.+..++
T Consensus        83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q  162 (472)
T TIGR00769        83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE  162 (472)
T ss_pred             HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence            222222222111   1111                          22222222233333334455 78899999999999


Q ss_pred             hhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069        389 LTNAFGLLLLFQGIASLVGPPIAGFLY  415 (461)
Q Consensus       389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~  415 (461)
                      ..+-+++.....++|..+++.+..++.
T Consensus       163 akRfy~l~~~ganlg~i~sg~~~~~~~  189 (472)
T TIGR00769       163 AKRFYALFGLGANVALIFSGRTIKYFS  189 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999888876

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=97.82  E-value=5e-05  Score=63.49  Aligned_cols=105  Identities=24%  Similarity=0.166  Sum_probs=82.6

Q ss_pred             HHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHhhh-
Q psy15069         28 IASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-  106 (461)
Q Consensus        28 ~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-  106 (461)
                      -.++......+++++++.+++++|+|+.+++|.++..+-.... +-++.+.++.+ .++.|+|.+..|++.-..+.++. 
T Consensus        42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~-s~l~G~~~a~lW~aqg~ylt~~s~  119 (156)
T PF05978_consen   42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPA-SALLGFGAALLWTAQGTYLTSYST  119 (156)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHH-HHHHhhhhHHhhHhhhHHHHHcCC
Confidence            4455567777888999999999999999999999988655443 45667777775 79999999999999988888887 


Q ss_pred             hccchhhhhhhccchhhhHHHHhHHHHH
Q psy15069        107 ERLRSLATGIAVCGSGLGTIIFAPIIDY  134 (461)
Q Consensus       107 ~~~rg~a~gi~~~~~~lg~~i~~~l~~~  134 (461)
                      +++|++-.++.-.....+.++|..+.-.
T Consensus       120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~  147 (156)
T PF05978_consen  120 EETIGRNTGIFWAIFQSSLIFGNLFLFF  147 (156)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            5778888888777777776666555444

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.74  E-value=0.00043  Score=66.96  Aligned_cols=163  Identities=7%  Similarity=0.034  Sum_probs=119.8

Q ss_pred             ccchhhHhhHH-H-HhCCCchhhHHHHHH-HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHH
Q psy15069        282 NVPYVYIVKLA-E-QRGVTRSNASSLISI-VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVEL  358 (461)
Q Consensus       282 ~~~~~~~~~~~-~-~~g~s~~~~~~~~~~-~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (461)
                      --.-+++..|+ + ++|++..+..--.-. ..-..++.-++...+.|..+.|+..+  +..+...+...++.+.++.+.+
T Consensus        20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpvii--l~~~~~i~t~~lll~~~sv~~m   97 (412)
T PF01770_consen   20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVII--LQALSYIITWLLLLFGTSVLAM   97 (412)
T ss_pred             CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHCcHHHH
Confidence            45567888888 3 389998887654433 33445556667788999955554443  4444444555566678899999


Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc-cCCchHHHHHHhHHHHHHHH
Q psy15069        359 AIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS-TLSYSPAFFLAGGAIFVSGV  437 (461)
Q Consensus       359 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~-~g~~~~~f~~~~~~~l~~~~  437 (461)
                      -+.-+++|++.+. ....++++-..+|+++..++.+......-+|..++..++..++.. ..+|....++......++.+
T Consensus        98 q~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~  176 (412)
T PF01770_consen   98 QLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL  176 (412)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            9999999988775 455567777788999999999999999999999999998877763 24688887787777777777


Q ss_pred             HHHHHHHhhH
Q psy15069        438 MLFVIPSLQS  447 (461)
Q Consensus       438 ~~~~~~~~~~  447 (461)
                      ..+++|+.++
T Consensus       177 ~~~fLP~~~~  186 (412)
T PF01770_consen  177 IALFLPMPKR  186 (412)
T ss_pred             HHHHcCCCCc
Confidence            7777776554

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>KOG2816|consensus

Probab=97.70  E-value=0.00022  Score=70.92  Aligned_cols=125  Identities=18%  Similarity=0.277  Sum_probs=90.5

Q ss_pred             hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhh--hhhhHHHHHHHHHHHhcCcc
Q psy15069        310 GAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGA--MIGAYVGLTSVILVDLLGLD  387 (461)
Q Consensus       310 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~--~~~~~~~~~~~~~~~~~~~~  387 (461)
                      ++..++.++..|.++||+|+|..+.+.....+...  +...+. . |+.++   +.++  +.+.......++++|....+
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~--~~~~~~-~-~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~  144 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPA--LCLLFQ-G-YWFFL---LLGLSGGFSAIFSVGFAYVADISSEE  144 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhH--HHHHHH-H-HHHhh---hcccccchhhhhhhhhhheeeccchh
Confidence            67888999999999999776665544333222222  222222 2 33333   3333  34566777788899999999


Q ss_pred             chhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        388 RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       388 ~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      +|...+|+.+.....+..++|.+++.+.... ++...|.+..+..++..+.....
T Consensus       145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~  198 (463)
T KOG2816|consen  145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLF  198 (463)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999999999999985 58888888888777776655443

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=97.68  E-value=0.00016  Score=53.23  Aligned_cols=78  Identities=14%  Similarity=0.075  Sum_probs=64.1

Q ss_pred             hccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHH
Q psy15069        279 IGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVEL  358 (461)
Q Consensus       279 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (461)
                      .+...+...+|.+.++.++|.++.+++-+...+++++|.+...++.++  .++..++..+++...+..+.+.+.++.+..
T Consensus         6 igRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w   83 (85)
T PF06779_consen    6 IGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH--SRPRRLLRAGLLLTVLSTAAMALTHSFWLW   83 (85)
T ss_pred             hHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence            445567788999999999999999999999999999999999999998  455555567777777888888877766543

Note that many members are hypothetical proteins.

>KOG1237|consensus

Probab=97.67  E-value=0.0019  Score=66.01  Aligned_cols=153  Identities=14%  Similarity=0.073  Sum_probs=111.2

Q ss_pred             eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-CcceeeehhhHHHHHHHHHhhcccc------------
Q psy15069          9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-GCRNVTICGAILGSACLAVSVFAKN------------   75 (461)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~g~~~~~~~~~l~~~~~~------------   75 (461)
                      .+..++.++++.+.....-..+.+........++.+.++|-| ||-+.+.++.++..++.++..++..            
T Consensus        59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~  138 (571)
T KOG1237|consen   59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK  138 (571)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence            456677888898888888888888888888889999999965 5666777777777777654333211            


Q ss_pred             ----------h---hhHHHHhhccccccccccchhHHHHHHhhhh----c---cchhhhhhhccchhhhHHHHhHHHHHH
Q psy15069         76 ----------V---ITLCITIGFGTGLGFGLIYLPAIVSVTCYFE----R---LRSLATGIAVCGSGLGTIIFAPIIDYT  135 (461)
Q Consensus        76 ----------~---~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~----~---~rg~a~gi~~~~~~lg~~i~~~l~~~l  135 (461)
                                -   ..++.. .-+..+|.|...+.....-.+-|+    +   ++..-+.+++...++|..+...+..+.
T Consensus       139 ~~~~~c~~~s~~q~~~~~~~-l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi  217 (571)
T KOG1237|consen  139 PGGNVCESPSKLQLAVLYGA-LYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI  217 (571)
T ss_pred             CCCCcccCcchHHHHHHHHH-HHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence                      1   133333 245678888888888777777764    1   223557778888999998888888877


Q ss_pred             HHhhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069        136 VREYGWKITLLVLSVTVLSAVLFGILL  162 (461)
Q Consensus       136 ~~~~gw~~~f~i~~~~~l~~~i~~~~~  162 (461)
                      -++.||.+.|-+..+..++.++..+..
T Consensus       218 q~~~~w~lgf~i~~~~~~lai~iF~~g  244 (571)
T KOG1237|consen  218 QDNVGWKLGFGIPTVLNALAILIFLPG  244 (571)
T ss_pred             hhcccceeeccHHHHHHHHHHHHHHcC
Confidence            778999999999888877766554443

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.51  E-value=4.7e-05  Score=55.42  Aligned_cols=57  Identities=14%  Similarity=0.224  Sum_probs=49.8

Q ss_pred             eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHH
Q psy15069          7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILG   63 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~   63 (461)
                      +-.+.|-+.++.|.|..++|.+.++.-+...++.|+.|.++||+++++.++.+..++
T Consensus        19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~   75 (77)
T PF12832_consen   19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM   75 (77)
T ss_pred             HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence            345677778889999999999999999999999999999999999998877766554

>PRK03612 spermidine synthase; Provisional

Probab=97.51  E-value=0.0026  Score=64.66  Aligned_cols=164  Identities=18%  Similarity=0.147  Sum_probs=94.2

Q ss_pred             HHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHH-HHHHHHHHH-HHHHHh
Q psy15069        273 SNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYI-YNGCLAICG-AATVIC  349 (461)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~-~~~~~~  349 (461)
                      ..++..++..++-.....++ --+|-+....+.+++++-++..+|+.+.+++.++  ..+.+. ..+.+.+.+ ++..+.
T Consensus        22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~--~~~~~~~~e~~i~l~~~~~~~ll   99 (521)
T PRK03612         22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD--AAAGFVAVELLLALLGGLSALIL   99 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            33334444334444333444 4468888888999999999999999999888754  222221 111111111 111111


Q ss_pred             hhhhh-----HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeee-cccCCchH
Q psy15069        350 AFCYN-----YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY-DSTLSYSP  423 (461)
Q Consensus       350 ~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~-~~~g~~~~  423 (461)
                      .....     ....+...++.++..|+..|+...+..+... ++.+...|-.+....+|+++|+.+.+++. ...|....
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t  178 (521)
T PRK03612        100 YAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRT  178 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHH
Confidence            11111     1122344456778888888887776655332 34677788888888999999999988665 46675555


Q ss_pred             HHHHHhHHHHHHHHHH
Q psy15069        424 AFFLAGGAIFVSGVML  439 (461)
Q Consensus       424 ~f~~~~~~~l~~~~~~  439 (461)
                      .+++..+..+++++.+
T Consensus       179 ~~~~a~l~~~~a~~~~  194 (521)
T PRK03612        179 AALTGSLNLLAALVFL  194 (521)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            5544443333343333

>KOG0637|consensus

Probab=97.39  E-value=0.0015  Score=63.24  Aligned_cols=146  Identities=14%  Similarity=0.172  Sum_probs=105.6

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC----CCcchhHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDR----PCVNRLYIYNGCLAI  341 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~~~~~~~~~~~~~~~  341 (461)
                      +.+.+....+...++...-..++++|+++.|.+....+.++.+.-+.+++-+++.|..+||    +||||..+.. ....
T Consensus        33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~-~s~~  111 (498)
T KOG0637|consen   33 KLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILA-GSLL  111 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHH-hhHH
Confidence            4445555566666777777889999999999999999999999999999999999999996    4666665543 3344


Q ss_pred             HHHHHHHhhhhhhHH-----------------HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhH-HHHHHHHHHHhh
Q psy15069        342 CGAATVICAFCYNYV-----------------ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTN-AFGLLLLFQGIA  403 (461)
Q Consensus       342 ~~~~~~~~~~~~~~~-----------------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~g  403 (461)
                      ..+.+++.++..++.                 ..++.+-+.-++.-..+...-+++.|+...+++-+ +++....+..+|
T Consensus       112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG  191 (498)
T KOG0637|consen  112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG  191 (498)
T ss_pred             HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence            455555665554322                 12222334444454556666778899987776667 999999999999


Q ss_pred             hhhccceee
Q psy15069        404 SLVGPPIAG  412 (461)
Q Consensus       404 ~~~gp~i~g  412 (461)
                      +.+|-.+++
T Consensus       192 nvLGY~~g~  200 (498)
T KOG0637|consen  192 NVLGYALGS  200 (498)
T ss_pred             ceeeeeccc
Confidence            988877766

>KOG3626|consensus

Probab=97.37  E-value=0.00013  Score=75.04  Aligned_cols=177  Identities=14%  Similarity=0.171  Sum_probs=129.9

Q ss_pred             HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069        270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC  349 (461)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~  349 (461)
                      +.+..+.+.+....+...+..+-+.++++..+.|++.+.+-+++.+...+..+...|.. |+++ +..+.++++++.++.
T Consensus       102 l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~H-rPr~-Ig~G~~~m~lgsll~  179 (735)
T KOG3626|consen  102 LSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGH-RPRW-IGIGLVLMGLGSLLF  179 (735)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccC-ccce-eeechhHHHHHHHHH
Confidence            44445555555544444555555788999999999999999999999999999999953 3333 334555555544443


Q ss_pred             hhh-------------------------------------------------hh--HH-HHHHHHHHHhhhhhhHHHHHH
Q psy15069        350 AFC-------------------------------------------------YN--YV-ELAIYAGVFGAMIGAYVGLTS  377 (461)
Q Consensus       350 ~~~-------------------------------------------------~~--~~-~~~~~~~l~g~~~~~~~~~~~  377 (461)
                      .+-                                                 .+  .| .+++..++.|+|..+.+++..
T Consensus       180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGi  259 (735)
T KOG3626|consen  180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGI  259 (735)
T ss_pred             hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCC
Confidence            211                                                 00  22 334455889999999999999


Q ss_pred             HHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeee----cc--------------cCCchHHHHHHhHHHHHHHHHH
Q psy15069        378 VILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY----DS--------------TLSYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       378 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~----~~--------------~g~~~~~f~~~~~~~l~~~~~~  439 (461)
                      +++-|.+.+++.....|+...+..+|-++|-.+++.+.    |.              .|.|...|++.+.+.++.++.+
T Consensus       260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~  339 (735)
T KOG3626|consen  260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL  339 (735)
T ss_pred             ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998888887777766553    22              3458889999999999999998


Q ss_pred             HHHHHhhHh
Q psy15069        440 FVIPSLQSY  448 (461)
Q Consensus       440 ~~~~~~~~~  448 (461)
                      ++.|+..++
T Consensus       340 f~fPk~lp~  348 (735)
T KOG3626|consen  340 FFFPKELPK  348 (735)
T ss_pred             HhCcccCcc
Confidence            888776554

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=97.25  E-value=0.016  Score=52.11  Aligned_cols=55  Identities=18%  Similarity=0.340  Sum_probs=37.4

Q ss_pred             ccchhhhhhhccchhhhHHHHhHHHHHH---HH--hhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069        108 RLRSLATGIAVCGSGLGTIIFAPIIDYT---VR--EYGWKITLLVLSVTVLSAVLFGILL  162 (461)
Q Consensus       108 ~~rg~a~gi~~~~~~lg~~i~~~l~~~l---~~--~~gw~~~f~i~~~~~l~~~i~~~~~  162 (461)
                      |+|+..+.+..-+.++|.++.-..--..   .+  +-+|++.+.+.+++.++.+++..++
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if   61 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF   61 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6788888888999999987753332111   11  2369999998888877666555554

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=97.13  E-value=0.019  Score=57.67  Aligned_cols=115  Identities=11%  Similarity=-0.026  Sum_probs=70.9

Q ss_pred             CccHHHHHHHHHHh-hhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc---------cch---------------
Q psy15069         22 DGVTSWIASILVGV-TLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA---------KNV---------------   76 (461)
Q Consensus        22 ~~~~~~~~s~~~~~-~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~---------~~~---------------   76 (461)
                      ...+..+-....+. ..+...+..++.+|+++.++.-.....+...+.+.++.         ++.               
T Consensus        57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~  136 (491)
T PF03219_consen   57 AEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKG  136 (491)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHH
Confidence            34455555544443 34557789999999999999777766666666555543         111               


Q ss_pred             -------hhHHHHhhccccccccccch-hHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH
Q psy15069         77 -------ITLCITIGFGTGLGFGLIYL-PAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR  137 (461)
Q Consensus        77 -------~~l~i~~~~l~G~g~~~~~~-~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~  137 (461)
                             |...+.+ ++.-+=...+.. .-...+++.+ .++-.+..++...+.++|.++++.+...+.+
T Consensus       137 ~i~~~~~Wt~slfY-v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~  205 (491)
T PF03219_consen  137 FIAMFRNWTFSLFY-VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS  205 (491)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   1111101 111111111111 1234567767 4788889999999999999999999998887

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=97.09  E-value=0.0073  Score=50.58  Aligned_cols=111  Identities=9%  Similarity=-0.033  Sum_probs=78.9

Q ss_pred             CchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHH
Q psy15069        298 TRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTS  377 (461)
Q Consensus       298 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~  377 (461)
                      +....-.-.++......+..++.+.+.+++|.  |+.+.++.+...+-.. ..+.++.+.++...++.|++.+..+....
T Consensus        35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~--K~sm~lg~~~y~~y~~-~~~~~~~~~l~~~s~l~G~~~a~lW~aqg  111 (156)
T PF05978_consen   35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGP--KWSMILGSLGYAIYIA-SFFYPNSYTLYPASALLGFGAALLWTAQG  111 (156)
T ss_pred             cccccHHHHHHHHHHHHHHHHhHHHHHHHHhh--HHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHhhhhHHhhHhhh
Confidence            33334445556666677777888888888554  4444445444443222 22455778888899999999999999999


Q ss_pred             HHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069        378 VILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA  411 (461)
Q Consensus       378 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~  411 (461)
                      .++.+...++.+++..++.-.....+.++|..+.
T Consensus       112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~  145 (156)
T PF05978_consen  112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFL  145 (156)
T ss_pred             HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999989999988887777777777766543

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=96.78  E-value=0.0017  Score=63.41  Aligned_cols=109  Identities=15%  Similarity=0.180  Sum_probs=84.0

Q ss_pred             eeehhhHHHHHHHHHhhcc---cch------hhHHHHhhccccccccccchhHHHHHHhhhh----ccchhhhhhhccch
Q psy15069         55 VTICGAILGSACLAVSVFA---KNV------ITLCITIGFGTGLGFGLIYLPAIVSVTCYFE----RLRSLATGIAVCGS  121 (461)
Q Consensus        55 ~~~~g~~~~~~~~~l~~~~---~~~------~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~----~~rg~a~gi~~~~~  121 (461)
                      .++.|.++..+|.++..++   .+.      +.+++++ ++.++|.|..-+.......+-++    ++|.....+++.+.
T Consensus         3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL-~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i   81 (372)
T PF00854_consen    3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGL-ALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI   81 (372)
T ss_dssp             HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHH-HHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHH-HHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence            3566777888888773332   222      5677764 67899999999999999988873    24677788899999


Q ss_pred             hhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069        122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus       122 ~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      ++|..+++.+..++-+++||...|.+.++..++..+..+.-++
T Consensus        82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~  124 (372)
T PF00854_consen   82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK  124 (372)
T ss_dssp             HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999988877766555444

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG1479|consensus

Probab=96.71  E-value=0.038  Score=53.36  Aligned_cols=106  Identities=11%  Similarity=0.078  Sum_probs=65.6

Q ss_pred             hhHHHHHH-HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHH-h------hhhhhHHHHHHHHHHHhhhhhhH
Q psy15069        301 NASSLISI-VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVI-C------AFCYNYVELAIYAGVFGAMIGAY  372 (461)
Q Consensus       301 ~~~~~~~~-~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~l~g~~~~~~  372 (461)
                      -.-++... +++...+|++...++-++  .+|.....+..=...+-++. +      ....+-++.++...++|+..|=.
T Consensus       283 y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl  360 (406)
T KOG1479|consen  283 YALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL  360 (406)
T ss_pred             hHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence            34445555 889999999988888886  34433322222111111111 1      12346678888999999999877


Q ss_pred             HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcc
Q psy15069        373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGP  408 (461)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp  408 (461)
                      ..+...+..+.+|++++-.+-.++..+-..|...|.
T Consensus       361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~  396 (406)
T KOG1479|consen  361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS  396 (406)
T ss_pred             hhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh
Confidence            777777888888877655555555555555554444

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=96.68  E-value=0.0044  Score=60.52  Aligned_cols=86  Identities=14%  Similarity=0.101  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc---chhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHH
Q psy15069        356 VELAIYAGVFGAMIGAYVGLTSVILVDLLGLD---RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAI  432 (461)
Q Consensus       356 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~  432 (461)
                      +.+++...+.++|.|..-|...++.+|.++++   ++.+.+.+.+...++|..+++.+.+++.++.| |...|.+.++..
T Consensus        34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~  112 (372)
T PF00854_consen   34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGM  112 (372)
T ss_dssp             CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc-hhhhhhHHHHHH
Confidence            56788888999999999999999999999865   46777888999999999999999999998875 999999999888


Q ss_pred             HHHHHHHHHH
Q psy15069        433 FVSGVMLFVI  442 (461)
Q Consensus       433 l~~~~~~~~~  442 (461)
                      +++.+..+.-
T Consensus       113 ~~~~~~f~~~  122 (372)
T PF00854_consen  113 LLALIVFLSG  122 (372)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHHhC
Confidence            8887765543

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=96.58  E-value=0.00068  Score=64.32  Aligned_cols=107  Identities=11%  Similarity=0.157  Sum_probs=3.5

Q ss_pred             HHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH--HHHHHHHHh----------hhhhhHHHHHHHHHHHhhhhhh
Q psy15069        304 SLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA--ICGAATVIC----------AFCYNYVELAIYAGVFGAMIGA  371 (461)
Q Consensus       304 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~~l~g~~~~~  371 (461)
                      ..+..++++..+||.+.++..=+ +.+++++....+.  +..-.++++          ...++-++.++.++++|+..|-
T Consensus       186 ~~fl~Fn~gD~iGR~l~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy  264 (309)
T PF01733_consen  186 VLFLLFNLGDFIGRFLASWPRWP-GPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY  264 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHhcchhcceeEec-ccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence            45668999999999988764321 1233333322111  111111111          1122445667788899999998


Q ss_pred             HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069        372 YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA  411 (461)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~  411 (461)
                      ..++...+..+..+++++..+-.+..++-.+|-.+|..++
T Consensus       265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls  304 (309)
T PF01733_consen  265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS  304 (309)
T ss_dssp             --HHHH----------------------------------
T ss_pred             hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888888999888888888887777777777776653

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>KOG3574|consensus

Probab=96.47  E-value=0.038  Score=52.41  Aligned_cols=147  Identities=12%  Similarity=0.050  Sum_probs=89.6

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC-----CCCcchhHHHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD-----RPCVNRLYIYNGCL  339 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d-----r~~~~~~~~~~~~~  339 (461)
                      +++.++...+..+........ .+|.+++..|.|-++.+.....++=  ..-.+++.++.|     |+||||.++.-.-.
T Consensus        31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp~q~  107 (510)
T KOG3574|consen   31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQY  107 (510)
T ss_pred             hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence            356667777777777766655 8899898888887766653222221  234678888999     89999888764444


Q ss_pred             HHHHHHHHHhhhhh----------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccc
Q psy15069        340 AICGAATVICAFCY----------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPP  409 (461)
Q Consensus       340 ~~~~~~~~~~~~~~----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~  409 (461)
                      ++...+.++....+          +.......+++.-+..+......-.....+..+++.|-+..........|.++|..
T Consensus       108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~  187 (510)
T KOG3574|consen  108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV  187 (510)
T ss_pred             HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence            33333333322221          22223334455666666555555556666777787777766666666777777665


Q ss_pred             eeeee
Q psy15069        410 IAGFL  414 (461)
Q Consensus       410 i~g~l  414 (461)
                      +.=.+
T Consensus       188 ifLaL  192 (510)
T KOG3574|consen  188 VFLAL  192 (510)
T ss_pred             eeeEe
Confidence            54433

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=96.20  E-value=0.32  Score=48.10  Aligned_cols=178  Identities=12%  Similarity=0.022  Sum_probs=97.9

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHh-CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhH----HHH-HHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQR-GVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLY----IYN-GCL  339 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~----~~~-~~~  339 (461)
                      ..+.+++..++...+.-...+..|.++.+. .-+-.-.+..-....+..++..+..|.+.||..|.+..    +.. .+.
T Consensus         3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv   82 (432)
T PF06963_consen    3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV   82 (432)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence            345678888888888888888888888555 33444445555556677888888999999995433321    111 222


Q ss_pred             HHHHHHHHHhhhhhh-----HHHHHHHH-HHHhhh-hhhHHHHHHHH------HHHhc--CccchhHHHHHHHHHHHhhh
Q psy15069        340 AICGAATVICAFCYN-----YVELAIYA-GVFGAM-IGAYVGLTSVI------LVDLL--GLDRLTNAFGLLLLFQGIAS  404 (461)
Q Consensus       340 ~~~~~~~~~~~~~~~-----~~~~~~~~-~l~g~~-~~~~~~~~~~~------~~~~~--~~~~~~~~~g~~~~~~~~g~  404 (461)
                      .+.+..++.....+.     .+...... .+..++ ..-.......+      +..+.  +++...+..+.+.-+=.+.-
T Consensus        83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck  162 (432)
T PF06963_consen   83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK  162 (432)
T ss_pred             HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence            222222222211111     12221111 111111 11111121111      12223  23344445555555555678


Q ss_pred             hhccceeeeeecccCCchHHHHHHhHHHHHHHHH-HHHHHH
Q psy15069        405 LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM-LFVIPS  444 (461)
Q Consensus       405 ~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~-~~~~~~  444 (461)
                      .++|.+.|.+.+.. ++.....+.++..+++.+. .+++.+
T Consensus       163 llaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~vEy~~l~~  202 (432)
T PF06963_consen  163 LLAPLFVGLLMTFA-SPVIAAIFIAGWNLASVFVEYFLLAR  202 (432)
T ss_pred             HHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999875 5888888888888887766 334433

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=96.05  E-value=0.035  Score=53.96  Aligned_cols=130  Identities=13%  Similarity=0.016  Sum_probs=85.0

Q ss_pred             HHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy15069        303 SSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVD  382 (461)
Q Consensus       303 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~  382 (461)
                      +.+...-.+..++.++++.++.+|...+.+...  +..+..+++++..+.++.+.-++..++.+++.|..-...-.+ +.
T Consensus        62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~--~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~  138 (402)
T PF02487_consen   62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILI--CVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-TH  138 (402)
T ss_pred             hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHH--HHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HH
Confidence            335555667788888889999999766666553  444556667777778888888888888888888766666665 44


Q ss_pred             hcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC-CchHHHHHHhHHHHHHHHHHH
Q psy15069        383 LLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL-SYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       383 ~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g-~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      .+++    ...+......+.++.+|+...-.+-+ .| +.+..++....+.++-.+..+
T Consensus       139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f  192 (402)
T PF02487_consen  139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYF  192 (402)
T ss_pred             hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHH
Confidence            5653    23455555666677777665544444 33 456667666665544444433

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PRK03612 spermidine synthase; Provisional

Probab=95.95  E-value=0.028  Score=57.28  Aligned_cols=137  Identities=11%  Similarity=0.048  Sum_probs=78.3

Q ss_pred             HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHH---HHHHHHHh----hcccchhhHHHHhhccccc
Q psy15069         17 VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAIL---GSACLAVS----VFAKNVITLCITIGFGTGL   89 (461)
Q Consensus        17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~---~~~~~~l~----~~~~~~~~l~i~~~~l~G~   89 (461)
                      -+|-+..+.+.+.+++.++.++++.+++++.++.-++.. ..-..+   ..++..+.    .+...+..+...+.++.++
T Consensus        44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~  122 (521)
T PRK03612         44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL  122 (521)
T ss_pred             HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            357778888999999999999999999888644333322 111111   11111111    1111111111122345566


Q ss_pred             cccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHH-hhchhHHHHHHHHHHHH
Q psy15069         90 GFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-EYGWKITLLVLSVTVLS  154 (461)
Q Consensus        90 g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-~~gw~~~f~i~~~~~l~  154 (461)
                      -.|+..|....+..+...++-+...|-.+....+|.++|..+.+++.- .+|-..+.++.+.+.+.
T Consensus       123 l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~  188 (521)
T PRK03612        123 LIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLL  188 (521)
T ss_pred             HHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            666666555544443323345667777888888888888888777554 56766565555554433

>KOG4830|consensus

Probab=95.74  E-value=0.008  Score=53.64  Aligned_cols=144  Identities=9%  Similarity=0.074  Sum_probs=84.1

Q ss_pred             ccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q psy15069        260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGC  338 (461)
Q Consensus       260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~  338 (461)
                      ..+++-.++-+.+.+++.-.-...-..|+|.|. ++..++.+..+++-.+..+..+.-+.+..-+-=. |.|.+..+..+
T Consensus       196 ~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwn-gkrlKayYsaG  274 (412)
T KOG4830|consen  196 SWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWN-GKRLKAYYSAG  274 (412)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcC-cceeeeeeecc
Confidence            467777888888888888777777788888887 8888888888888888888777766654332221 23333333333


Q ss_pred             HHHHHHHHHHhhhh-hhHHH-HHHHHHHHhhhhhhHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHhhh
Q psy15069        339 LAICGAATVICAFC-YNYVE-LAIYAGVFGAMIGAYVGLTSVILVDLLGLD--RLTNAFGLLLLFQGIAS  404 (461)
Q Consensus       339 ~~~~~~~~~~~~~~-~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~  404 (461)
                      .++...+.....+. +++-. .+...++.|+..+.......++..++...+  ..+..+|-++++--+..
T Consensus       275 giiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~  344 (412)
T KOG4830|consen  275 GIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSN  344 (412)
T ss_pred             cHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcc
Confidence            33222222222222 22222 233445677777766555555555655533  34445566555544433

>KOG1237|consensus

Probab=95.26  E-value=0.1  Score=53.63  Aligned_cols=173  Identities=9%  Similarity=0.068  Sum_probs=118.5

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  345 (461)
                      ...+.....+...+++++..-+..|+ .+++.+...+.-....+........+++++++|-+ ..|.+.+.++.++..++
T Consensus        39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f-~gry~tI~~~s~i~~~G  117 (571)
T KOG1237|consen   39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSF-LGRYFTINIGSLISLLG  117 (571)
T ss_pred             HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence            33344445556666777766677777 78888888888888888888888999999999975 34544444444444444


Q ss_pred             HHHhhhhh----------------------h---HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC---c-c--chhHHHH
Q psy15069        346 TVICAFCY----------------------N---YVELAIYAGVFGAMIGAYVGLTSVILVDLLG---L-D--RLTNAFG  394 (461)
Q Consensus       346 ~~~~~~~~----------------------~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---~-~--~~~~~~g  394 (461)
                      ++++....                      +   ...++...-+..+|.|..-+...+.-+|.++   + +  +...-+.
T Consensus       118 ~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFn  197 (571)
T KOG1237|consen  118 LFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFN  197 (571)
T ss_pred             HHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchh
Confidence            33222211                      1   1133444556667888888888888888888   2 2  2335678


Q ss_pred             HHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        395 LLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       395 ~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      +.....++|..++-.+.-++-|.. +|...|.+..++..++.++++.
T Consensus       198 W~yf~~~~g~l~a~t~~vyiq~~~-~w~lgf~i~~~~~~lai~iF~~  243 (571)
T KOG1237|consen  198 WFYFSQNGGALLAQTVLVYIQDNV-GWKLGFGIPTVLNALAILIFLP  243 (571)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhcc-cceeeccHHHHHHHHHHHHHHc
Confidence            888888899888888877777765 5999999888888777766554

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=95.07  E-value=0.75  Score=46.38  Aligned_cols=151  Identities=9%  Similarity=0.024  Sum_probs=83.0

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGA-ANMVSRVILGYISDRPCVNRLYIYNGCLAI  341 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~  341 (461)
                      .++++.+.+..++..+.+...-..--... ...  .+.....+=....+ ..++...+..+++||+++.+.....+...+
T Consensus        23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~  100 (491)
T PF03219_consen   23 LKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL  100 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            46788888888877766533322221111 112  34444444332222 344556678899999766654432222211


Q ss_pred             H---HHHHHHhhhhh----hH----------------------HHHHHHHHHHhhhhhhHHH-HHHHHHHHhcCccchhH
Q psy15069        342 C---GAATVICAFCY----NY----------------------VELAIYAGVFGAMIGAYVG-LTSVILVDLLGLDRLTN  391 (461)
Q Consensus       342 ~---~~~~~~~~~~~----~~----------------------~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~  391 (461)
                      .   ..++++.+..+    +.                      |...+.-+..-+......+ +.+.+..|.++.++..+
T Consensus       101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKR  180 (491)
T PF03219_consen  101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKR  180 (491)
T ss_pred             HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence            1   11222222111    11                      1111111111111222233 57888999999999999


Q ss_pred             HHHHHHHHHHhhhhhccceeeeeec
Q psy15069        392 AFGLLLLFQGIASLVGPPIAGFLYD  416 (461)
Q Consensus       392 ~~g~~~~~~~~g~~~gp~i~g~l~~  416 (461)
                      -+++.....++|.++++.+..++.+
T Consensus       181 fYpl~g~ganigli~sG~~~~~~~~  205 (491)
T PF03219_consen  181 FYPLFGLGANIGLIFSGQLTSYFSS  205 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999888777766

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG2601|consensus

Probab=94.83  E-value=0.14  Score=48.48  Aligned_cols=140  Identities=12%  Similarity=0.100  Sum_probs=72.2

Q ss_pred             HHhHhcCCCccHHHHHHHH-HHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHH------hhcc-c-----chhhHH
Q psy15069         14 FTKVFQEGDGVTSWIASIL-VGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAV------SVFA-K-----NVITLC   80 (461)
Q Consensus        14 ~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l------~~~~-~-----~~~~l~   80 (461)
                      ++..++-+....--+..+. .....+.+++.|-+.|+..|+|++..-..+-=++.++      ..+. +     +..++.
T Consensus        53 ~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t  132 (503)
T KOG2601|consen   53 FMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFT  132 (503)
T ss_pred             HHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHH
Confidence            4455555444433333333 4455677889999999999999977665543333322      2222 2     344444


Q ss_pred             HHhhcccc----ccccccchhHHHHHHhhh----h-ccchhhh---hhhccchhhhHHHHhHHHHHHHHhhchhHHHHHH
Q psy15069         81 ITIGFGTG----LGFGLIYLPAIVSVTCYF----E-RLRSLAT---GIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVL  148 (461)
Q Consensus        81 i~~~~l~G----~g~~~~~~~~~~~~~~~f----~-~~rg~a~---gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~  148 (461)
                      .++ ++.-    ++.-........+-.+|.    . +.+..+.   +.....-..--.+.|.+.+.+++..+-|..-.+.
T Consensus       133 ~~l-vLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f  211 (503)
T KOG2601|consen  133 VCL-VLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTF  211 (503)
T ss_pred             HHH-HHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhh
Confidence            332 2211    111111111222334554    1 2233333   4444455556677778888777766777765555


Q ss_pred             HHHHHH
Q psy15069        149 SVTVLS  154 (461)
Q Consensus       149 ~~~~l~  154 (461)
                      ++-.++
T Consensus       212 ~~w~~v  217 (503)
T KOG2601|consen  212 AAWALV  217 (503)
T ss_pred             HHHHHH
Confidence            554444

>KOG1479|consensus

Probab=93.42  E-value=1.8  Score=42.08  Aligned_cols=176  Identities=14%  Similarity=0.062  Sum_probs=77.9

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCch---hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS---NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA  340 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~  340 (461)
                      +-.++..++...-.......+.+..+.|.+++-.+..   -.........+..++......++.-|  .+++......+.
T Consensus        17 ~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~--~~~~~~~~l~~~   94 (406)
T KOG1479|consen   17 NLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTR--LRTRVGYLLSLI   94 (406)
T ss_pred             ccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence            3344555555554555566666766666654422222   12222233444555556666666666  233222211111


Q ss_pred             H-HHHHHHHhhh--hh-----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceee
Q psy15069        341 I-CGAATVICAF--CY-----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG  412 (461)
Q Consensus       341 ~-~~~~~~~~~~--~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g  412 (461)
                      . ..+..+.+..  ..     .++...+..++.+++.+........... .+|++.....++-.+.++.+.+.+ .++..
T Consensus        95 ~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~ytqavm~G~a~aG~l~Sl~-~i~tk  172 (406)
T KOG1479|consen   95 AILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEYTQAVMSGQALAGTLTSLL-RILTK  172 (406)
T ss_pred             HHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHHHHHHHhcchhHhHHHHHH-HHHHH
Confidence            1 1111111122  11     2334455566777777777777766444 457665444433333332222211 12222


Q ss_pred             eee-cccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069        413 FLY-DSTLSYSPAFFLAGGAIFVSGVMLFVIP  443 (461)
Q Consensus       413 ~l~-~~~g~~~~~f~~~~~~~l~~~~~~~~~~  443 (461)
                      ... |.-.+-..-|.+..++.+++.++...++
T Consensus       173 a~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~  204 (406)
T KOG1479|consen  173 AAFSDSRTSALIYFITSTVILLLCFVLYLVLP  204 (406)
T ss_pred             HhcCCCCceeehhHHHHHHHHHHHHHHHHHhh
Confidence            222 2112233445555555556666555433

>KOG4332|consensus

Probab=91.98  E-value=0.13  Score=46.65  Aligned_cols=103  Identities=14%  Similarity=0.092  Sum_probs=67.5

Q ss_pred             hccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHH
Q psy15069        279 IGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVEL  358 (461)
Q Consensus       279 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (461)
                      .+-+.-.+|+-...+.+|+...+++.++.......++...+.|-++||-||+|.-+.  -++...+++ +.-+.+++-.+
T Consensus        51 AgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvt--ycitYiLsC-iTKhSpqYkVL  127 (454)
T KOG4332|consen   51 AGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT--YCITYILSC-ITKHSPQYKVL  127 (454)
T ss_pred             hhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceee--ehHHHHHHH-HhhcCCceEEE
Confidence            343333444433447889999999987776666667777788999999888776442  112222222 22356677788


Q ss_pred             HHHHHHHhhhhhhHHHHHHH-HHHHhc
Q psy15069        359 AIYAGVFGAMIGAYVGLTSV-ILVDLL  384 (461)
Q Consensus       359 ~~~~~l~g~~~~~~~~~~~~-~~~~~~  384 (461)
                      .+.+++-|+..+..++..-+ ++.|..
T Consensus       128 mVGR~LGGiaTsLLFSaFEsWliaEHn  154 (454)
T KOG4332|consen  128 MVGRVLGGIATSLLFSAFESWLIAEHN  154 (454)
T ss_pred             eehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence            88999999988877777665 455554

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=90.98  E-value=5  Score=39.93  Aligned_cols=150  Identities=9%  Similarity=0.015  Sum_probs=84.0

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHHHHhC---CCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRG---VTRSNASSLISIVGA-ANMVSRVILGYISDRPCVNRLYIYNGCL  339 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~~~~~~~~~~  339 (461)
                      .+++..+.+..++..+.++..-..-    |.+.   ..+....++=+..-+ +.++..++..++.++..+++......+.
T Consensus        26 ~~kflpl~Ll~f~I~~ny~~lR~lK----Dslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~  101 (509)
T COG3202          26 LKKFLPLALLFFCILFNYNLLRSLK----DSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGF  101 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh----hheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence            3456666776666665543322211    3332   345555565555555 5667778889999986555544332222


Q ss_pred             HHHHHHH---HHhhh----------hh-----hH------------HHHHHHHHHHhhhhhhHHH-HHHHHHHHhcCccc
Q psy15069        340 AICGAAT---VICAF----------CY-----NY------------VELAIYAGVFGAMIGAYVG-LTSVILVDLLGLDR  388 (461)
Q Consensus       340 ~~~~~~~---~~~~~----------~~-----~~------------~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~  388 (461)
                      ......+   .+.+.          .+     ..            |...+.-.+.=+-.....+ +.+....|+...++
T Consensus       102 F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~e  181 (509)
T COG3202         102 FLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEE  181 (509)
T ss_pred             HHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence            2221111   11111          01     01            2211111111111222223 56778899999999


Q ss_pred             hhHHHHHHHHHHHhhhhhccceeeeeecc
Q psy15069        389 LTNAFGLLLLFQGIASLVGPPIAGFLYDS  417 (461)
Q Consensus       389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~~~  417 (461)
                      ..+-+++.+...+++..++..+.+++..+
T Consensus       182 akRFy~lf~l~~ni~lllsg~~~~~~~k~  210 (509)
T COG3202         182 AKRFYPLFGLGANISLLLSGEVTSWLSKH  210 (509)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999998888887763

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=90.18  E-value=0.62  Score=46.26  Aligned_cols=142  Identities=11%  Similarity=0.040  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHH--hCCCchhhHHHHHHHhhhhhhhhhhhhhccC-----CCCcchhHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQ--RGVTRSNASSLISIVGAANMVSRVILGYISD-----RPCVNRLYIYNGCL  339 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d-----r~~~~~~~~~~~~~  339 (461)
                      +.++.+.++++.........-+|.++++  .+.|-++.+......+=-  --.+++.++.|     |+||||.+++-+-.
T Consensus         2 ~~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~Pf--SlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~   79 (544)
T PF13000_consen    2 IALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPF--SLKLLWAPIVDSVYSKRIGRRKSWIIPIQY   79 (544)
T ss_pred             eeHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechh--HHHHhhhhhhhhhcccccCCcchhhhHHHH
Confidence            3456777888888776666678888877  677777766532211111  13455666666     77888887653333


Q ss_pred             HHHHHHHHHhhhhh----------h---------H-----HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069        340 AICGAATVICAFCY----------N---------Y-----VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL  395 (461)
Q Consensus       340 ~~~~~~~~~~~~~~----------~---------~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  395 (461)
                       ++++.++.+...-          +         .     ..+...+++.-+..+-..-..-.....+..+++++-|..-
T Consensus        80 -l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTc  158 (544)
T PF13000_consen   80 -LSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTC  158 (544)
T ss_pred             -HHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHH
Confidence             3344333332211          0         0     0112222222222222222222334445566777766666


Q ss_pred             HHHHHHhhhhhcccee
Q psy15069        396 LLLFQGIASLVGPPIA  411 (461)
Q Consensus       396 ~~~~~~~g~~~gp~i~  411 (461)
                      ....++.|.+++-.+.
T Consensus       159 qtvG~~~Gyfls~tvF  174 (544)
T PF13000_consen  159 QTVGQTAGYFLSFTVF  174 (544)
T ss_pred             HHhHhhhhHHHHHHHH
Confidence            6666666666655443

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=89.19  E-value=26  Score=35.12  Aligned_cols=118  Identities=8%  Similarity=-0.045  Sum_probs=77.6

Q ss_pred             CCCccHHHHHHHHHH-hhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc---------cc----------hh--
Q psy15069         20 EGDGVTSWIASILVG-VTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA---------KN----------VI--   77 (461)
Q Consensus        20 ~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~---------~~----------~~--   77 (461)
                      ..+..+.++-+.... ++.+..++.+.+.+++.+.++...-+..++..++++++.         ++          ..  
T Consensus        58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~  137 (509)
T COG3202          58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF  137 (509)
T ss_pred             CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence            346678888888888 667889999999999999999888888888888777664         11          00  


Q ss_pred             --hHH-----HHhhccccccc---cccch-hHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH
Q psy15069         78 --TLC-----ITIGFGTGLGF---GLIYL-PAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR  137 (461)
Q Consensus        78 --~l~-----i~~~~l~G~g~---~~~~~-~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~  137 (461)
                        +++     ..++++.=++.   ..+.. .-....+|.+. ++-.|-+++...+.+++..+...+..++..
T Consensus       138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k  209 (509)
T COG3202         138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK  209 (509)
T ss_pred             ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence              011     00011111110   11111 11233455553 667888999999999999999888888875

>KOG3097|consensus

Probab=88.91  E-value=1.1  Score=42.08  Aligned_cols=87  Identities=15%  Similarity=0.079  Sum_probs=53.5

Q ss_pred             HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccc
Q psy15069         14 FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGL   93 (461)
Q Consensus        14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~   93 (461)
                      ++...+.+....++.  ........++++.+.+++++|.|..+.++......... .-+-+.+..++-. .++.|+|.+.
T Consensus        51 lq~~vn~~lg~~sl~--~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa-~~~~G~aa~p  126 (390)
T KOG3097|consen   51 LQTSVNYDLGTVSLG--ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPA-GLVLGMAAGP  126 (390)
T ss_pred             HHHHHhcCcccchhh--hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccH-HHhhcccccc
Confidence            344444444444322  22444456777788999999999988777666554432 2233455666665 6888999888


Q ss_pred             cchhHHHHHHh
Q psy15069         94 IYLPAIVSVTC  104 (461)
Q Consensus        94 ~~~~~~~~~~~  104 (461)
                      .|..--+++.+
T Consensus       127 ~W~SkgtYlT~  137 (390)
T KOG3097|consen  127 IWASKGTYLTP  137 (390)
T ss_pred             ccccCcceecH
Confidence            77655444433

>KOG3098|consensus

Probab=88.80  E-value=2.4  Score=42.20  Aligned_cols=104  Identities=12%  Similarity=-0.041  Sum_probs=78.4

Q ss_pred             HHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc
Q psy15069        305 LISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLL  384 (461)
Q Consensus       305 ~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~  384 (461)
                      -.++......+..++.+.+.|+  ..+++.+.++..........+. -.|.+-.+...++.|+|.+..+...-.++++..
T Consensus        55 ~~aiiY~~ftv~~l~~psiv~~--i~~K~~lv~ga~~y~~f~~gfl-~~N~y~~yfssallG~Gaallw~GqG~ylt~~s  131 (461)
T KOG3098|consen   55 GQAIIYAFFTVSCLFAPSIVNF--LGPKWALVIGATCYAAFPLGFL-FPNSYYLYFSSALLGFGAALLWTGQGGYLTSNS  131 (461)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHH--hhHHHHHHHHhHHHHHHHHHHH-hcchHHHHHHHHHhhhhHHheecccceehhhcC
Confidence            3677778888888999999999  5566666566555544443333 346677888999999999988888888999999


Q ss_pred             CccchhHHHHHHHHHHHhhhhhcccee
Q psy15069        385 GLDRLTNAFGLLLLFQGIASLVGPPIA  411 (461)
Q Consensus       385 ~~~~~~~~~g~~~~~~~~g~~~gp~i~  411 (461)
                      .++...+..++.=.+...+.++|..+.
T Consensus       132 t~~tie~Nisi~Wai~~~~li~Ggi~l  158 (461)
T KOG3098|consen  132 TRETIERNISIFWAIGQSSLIIGGIIL  158 (461)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence            988888888887777777777765443

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=88.46  E-value=26  Score=34.21  Aligned_cols=21  Identities=24%  Similarity=0.494  Sum_probs=14.6

Q ss_pred             cccccchhHHHHHHHHHHHhh
Q psy15069        259 MELLRDPIFILFTISNIFTSI  279 (461)
Q Consensus       259 ~~~l~~~~~~~~~~~~~~~~~  279 (461)
                      ++.+++|..+...++..+...
T Consensus       239 ~~~~~nP~~~a~~lgli~~~~  259 (385)
T PF03547_consen  239 LKLFKNPPLIAIILGLIIGLI  259 (385)
T ss_pred             HHHHhCcHHHHHHHHHHHHHH
Confidence            456889988877776665444

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	461
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	8e-11
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	2e-05
2cfq_A	417	Lactose permease; transport, transport mechanism,	8e-06
2cfq_A	417	Lactose permease; transport, transport mechanism,	3e-04
2cfq_A	417	Lactose permease; transport, transport mechanism,	4e-04

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 62.8 bits (153), Expect = 8e-11
 Identities = 41/229 (17%), Positives = 75/229 (32%), Gaps = 15/229 (6%)

Query: 225 DSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIF---TSIGF 281
            S    P  E   D     N   + + T +++    +L + +     I+N+F      G 
Sbjct: 212 QSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGI 271

Query: 282 N--VPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL 339
               P  Y   L E +      +S    +   A +   ++ G++SD+          G  
Sbjct: 272 LDWSP-TY---LKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVF 326

Query: 340 AICGAATVICAFCYNYVE----LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL 395
            +         +  N         I   V G +I   V L  +  ++L        A G 
Sbjct: 327 FMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF 386

Query: 396 LLLFQGI-ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443
             LF  +  S+    I G+  D          + GG+I    +++ V+ 
Sbjct: 387 TGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 435

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 12/163 (7%)

Query: 25  TSWIASI--LVGV--TLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKN----V 76
           +SW   +    G+  TL  G +S                 ++  A +   +         
Sbjct: 290 SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVD 349

Query: 77  ITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIID-YT 135
           +   I IGF       LI L A+       ++    A G       LG  + A  I  YT
Sbjct: 350 MICMIVIGFLIYGPVMLIGLHALELAP---KKAAGTAAGFTGLFGYLGGSVAASAIVGYT 406

Query: 136 VREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGA 178
           V  +GW    +V+    + AV+  I++   E++  E+ +++  
Sbjct: 407 VDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELV 449

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 46.8 bits (111), Expect = 8e-06
 Identities = 29/209 (13%), Positives = 72/209 (34%), Gaps = 8/209 (3%)

Query: 259 MELLRDPIFILFTISN--IFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVS 316
           M  L++  F +F +     F  +G   P+  I  L +   +++S+   + + +   +++ 
Sbjct: 1   MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIW-LHDINHISKSDTGIIFAAISLFSLLF 59

Query: 317 RVILGYISDR-PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGL 375
           + + G +SD+      L      + +  A   I  F        +   + G +   +   
Sbjct: 60  QPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFN 119

Query: 376 TSVILVDLLGLDRLTN---AFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAI 432
                V+             FG   +F  +   +G  I G ++    +    +  +G A+
Sbjct: 120 AGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCAL 178

Query: 433 FVSGVMLFVIPSLQSYLLKRKEKKLSSES 461
            ++ ++ F      S          +  +
Sbjct: 179 ILAVLLFFAKTDAPSSATVANAVGANHSA 207

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 22/189 (11%), Positives = 57/189 (30%), Gaps = 8/189 (4%)

Query: 259 MELLRDPIFILFTISNIFTSIGFNVP----YVYIVKLAEQRGVTRSNASSLISIVGAANM 314
           +EL R P     ++  I  S  ++V       +                 + ++    N 
Sbjct: 214 LELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNA 273

Query: 315 VSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVG 374
                   I +R       +      I     +  +F  + +E+ I   +    +   + 
Sbjct: 274 SIMFFAPLIINRIGGKNALLL--AGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLV 331

Query: 375 LTSVILVDLLGLDRLTNAFGLL-LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF 433
                +     +      + +    F+ +A +    +AG +Y+S + +  A+ + G    
Sbjct: 332 GCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYES-IGFQGAYLVLGLVAL 390

Query: 434 VSGVMLFVI 442
              ++    
Sbjct: 391 GFTLISVFT 399

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 6/164 (3%)

Query: 1   DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA 60
           D    +F   F  F    ++G  V  ++ ++   +       +   +N+ G +N  +   
Sbjct: 240 DQQFANF---FTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAG 296

Query: 61  ILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGI-AV 118
            + S  +  S FA + + + I            + +     +T  F  R  +    +   
Sbjct: 297 TIMSVRIIGSSFATSALEVVILKTL-HMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFC 355

Query: 119 CGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILL 162
               L  I  + +        G++   LVL +  L   L  +  
Sbjct: 356 FFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFT 399

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	461
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	100.0
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	100.0
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	100.0
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	100.0
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.97
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.96
2xut_A	524	Proton/peptide symporter family protein; transport	99.96
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.65
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.65
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.65
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.61
2xut_A	524	Proton/peptide symporter family protein; transport	99.59
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.23
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.23

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=100.00  E-value=1.3e-39  Score=324.98  Aligned_cols=381  Identities=15%  Similarity=0.136  Sum_probs=304.1

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhc----ccchhhHH
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVF----AKNVITLC   80 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~----~~~~~~l~   80 (461)
                      +.++.+.|.+.+++ .+..+.|++.+++.+++.+++++.|++.||+|||++++.+.++.+++.+++++    ++|++.++
T Consensus        45 ~~~~~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (451)
T 1pw4_A           45 KNFALAMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMF  123 (451)
T ss_dssp             TSHHHHHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHH
T ss_pred             HHHHHHHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHH
Confidence            34567789999999 99999999999999999999999999999999999999999999999999999    99999999


Q ss_pred             HHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc-hhHHHHHHHHHHHHHHHH
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG-WKITLLVLSVTVLSAVLF  158 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g-w~~~f~i~~~~~l~~~i~  158 (461)
                      +. |++.|++.+...++..+++.+++| ++|++++++...+.++|.+++|++++.+.+.+| ||++|++.++++++..++
T Consensus       124 ~~-~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~  202 (451)
T 1pw4_A          124 VL-LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALF  202 (451)
T ss_dssp             HH-HHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHH
T ss_pred             HH-HHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence            85 999999999999999999999995 889999999999999999999999999999899 999999999988877766


Q ss_pred             HhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccc
Q psy15069        159 GILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTED  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (461)
                      .++..|+++.+.+.+++++ .+++                .                     ++         +.+++  
T Consensus       203 ~~~~~~~~~~~~~~~~~~~-~~~~----------------~---------------------~~---------~~~~~--  233 (451)
T 1pw4_A          203 AFAMMRDTPQSCGLPPIEE-YKND----------------Y---------------------PD---------DYNEK--  233 (451)
T ss_dssp             HHHHCCCSSTTTCCCSCTT-TCCC--------------------------------------------------------
T ss_pred             HHhhccCCHhhcCCCChhh-hccc----------------c---------------------cc---------cchhh--
Confidence            6555554332221000000 0000                0                     00         00000  


Q ss_pred             ccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhh
Q psy15069        239 KTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSR  317 (461)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~  317 (461)
                              ++.+...++....+.+|+|.++.+.+..++.....+.+..+.|.|+++ .|++..+.+++.+...++.++++
T Consensus       234 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  305 (451)
T 1pw4_A          234 --------AEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGT  305 (451)
T ss_dssp             -------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                    000011111112356889999999999999999989999999999965 89999999999999999999999


Q ss_pred             hhhhhccCCC--CcchhHHHHHHHHHHH-HHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069        318 VILGYISDRP--CVNRLYIYNGCLAICG-AATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA  392 (461)
Q Consensus       318 ~~~g~l~dr~--~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (461)
                      ++.|++.||+  ++++...  .+..+.. ++++++.+.  .+.+...+..++.|++.+...+....++.|.+|+++|+++
T Consensus       306 ~~~g~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  383 (451)
T 1pw4_A          306 LLCGWMSDKVFRGNRGATG--VFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTA  383 (451)
T ss_dssp             HHHHHHHHHTSTTCHHHHH--HHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHH
T ss_pred             HHHHHHHHHHhcCCchhHH--HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhH
Confidence            9999999996  5443332  3333333 455555444  3566777778889998888888888999999999999999


Q ss_pred             HHHHHHHHHh-hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069        393 FGLLLLFQGI-ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS  447 (461)
Q Consensus       393 ~g~~~~~~~~-g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~  447 (461)
                      +|+.+....+ |..++|.+.|.+.|..| |+..|++.+++.+++.++.+..++.++
T Consensus       384 ~~~~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (451)
T 1pw4_A          384 AGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGEK  438 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSSC-SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            9999999999 99999999999999875 999999999988888877766554433

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=100.00  E-value=2e-36  Score=300.79  Aligned_cols=351  Identities=15%  Similarity=0.122  Sum_probs=284.6

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hcccchhhHHHH
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFAKNVITLCIT   82 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~~~~~~l~i~   82 (461)
                      .++.+.|.+++++|.+..+.|++.+++.+++.+++++.|++.||+|||++++.+.++.+++.+++   +++++++.+++.
T Consensus        44 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  123 (438)
T 3o7q_A           44 LNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVG  123 (438)
T ss_dssp             HHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence            45677899999999999999999999999999999999999999999999999999999999999   899999999985


Q ss_pred             hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH-Hhhc--------------------
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV-REYG--------------------  140 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~-~~~g--------------------  140 (461)
                       |++.|++.+...++..+++.+++| |+|++++++.+++.++|.+++|++++.+. +..+                    
T Consensus       124 -~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (438)
T 3o7q_A          124 -LFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKH  202 (438)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHH
T ss_pred             -HHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhh
Confidence             899999999999999999999995 88999999999999999999999999998 4444                    


Q ss_pred             -----hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCc
Q psy15069        141 -----WKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPT  215 (461)
Q Consensus       141 -----w~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (461)
                           ||++|++.+++.++..++.++.+ .++.+++++++                                        
T Consensus       203 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~----------------------------------------  241 (438)
T 3o7q_A          203 SLVLSVQTPYMIIVAIVLLVALLIMLTK-FPALQSDNHSD----------------------------------------  241 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCTTTCCCC----------------------------------------
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHc-CCccccccccc----------------------------------------
Confidence                 99999988887776665544432 22211100000                                        


Q ss_pred             ccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhH-HHH
Q psy15069        216 EVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKL-AEQ  294 (461)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  294 (461)
                                         ++         .++.+...+     +++|+|.++...+..++.......+..++|.| +++
T Consensus       242 -------------------~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (438)
T 3o7q_A          242 -------------------AK---------QGSFSASLS-----RLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEE  288 (438)
T ss_dssp             -------------------SS---------TTSHHHHHH-----HHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------------cc---------ccchhhhHH-----HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence                               00         001112222     46789999999998888888888889999999 766


Q ss_pred             h-CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHH
Q psy15069        295 R-GVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYV  373 (461)
Q Consensus       295 ~-g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  373 (461)
                      . |++..+.+...+...++.++++++.|++.||+++++  ++..+.++..+..++..+.++.+. .+..++.|++.+...
T Consensus       289 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~  365 (438)
T 3o7q_A          289 IPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK--VLAAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQY  365 (438)
T ss_dssp             STTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHTTHH
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--HHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHH
Confidence            5 999999999999999999999999999999975444  344555555666666666666554 344578888988889


Q ss_pred             HHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069        374 GLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG  436 (461)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~  436 (461)
                      +....+..|.+|++ ++++.++.. ...+|+.++|.+.|++.|..|+|+..|++.+++.++..
T Consensus       366 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~  426 (438)
T 3o7q_A          366 PTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF  426 (438)
T ss_dssp             HHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            99999989999855 888888877 67799999999999999998779988887665544443

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=100.00  E-value=5.8e-35  Score=284.38  Aligned_cols=342  Identities=15%  Similarity=0.060  Sum_probs=277.0

Q ss_pred             eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069          6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF   85 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~   85 (461)
                      .++...|.+.+++|.+..+.+++.+++.++..+++++.|++.||+|||+++..+.++.+++.++.+++++++.+++. |+
T Consensus        18 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~   96 (375)
T 2gfp_A           18 IYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA-SA   96 (375)
T ss_dssp             HHHHHHHHHHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred             HHhhhhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHH-HH
Confidence            34567889999999999999999999999999999999999999999999999999999999999999999999985 89


Q ss_pred             cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +.|++.+...+...+++.+++| |+|++++++...+.++|..++|++++.+.+.+|||+.|++.+++.++..+...+..|
T Consensus        97 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (375)
T 2gfp_A           97 MQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMP  176 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSC
T ss_pred             HHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCc
Confidence            9999999999999999999995 889999999999999999999999999999899999999998887776654444444


Q ss_pred             CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069        165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (461)
                      +++.++  +++                                                          ++         
T Consensus       177 ~~~~~~--~~~----------------------------------------------------------~~---------  187 (375)
T 2gfp_A          177 ETRPVD--APR----------------------------------------------------------TR---------  187 (375)
T ss_dssp             CCSTTT--CCC----------------------------------------------------------CC---------
T ss_pred             ccCCCC--ccc----------------------------------------------------------cc---------
Confidence            322111  000                                                          00         


Q ss_pred             CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069        245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVILGYI  323 (461)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  323 (461)
                          .++..     ++.+|+|.++...+..++.......+..+.|.++++ .|.++.+.+.+.+...++.++++++.+++
T Consensus       188 ----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l  258 (375)
T 2gfp_A          188 ----LLTSY-----KTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRP  258 (375)
T ss_dssp             ----TTTCS-----THHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTT
T ss_pred             ----HHHHH-----HHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                00011     135678889888888888888888889999999855 89999999999999999999999999999


Q ss_pred             cCCCCcchhHHHHHHH-HHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069        324 SDRPCVNRLYIYNGCL-AICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ  400 (461)
Q Consensus       324 ~dr~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  400 (461)
                      .||.+  ++....... ...++..+....  .++.+..++..++.|++.+...+....++.|.+| ++|+++.|+.+...
T Consensus       259 ~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~  335 (375)
T 2gfp_A          259 NKRFS--TLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FLAGTAGALVGGLQ  335 (375)
T ss_dssp             TTHHH--HHHHHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH-HHHHHHHHHHHHHH
T ss_pred             HHHHH--HHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC-cccchHHHHHHHHH
Confidence            99943  332222211 112222112222  2356666677888999999989999999999998 89999999999999


Q ss_pred             HhhhhhccceeeeeecccCCchHHHHHHhH
Q psy15069        401 GIASLVGPPIAGFLYDSTLSYSPAFFLAGG  430 (461)
Q Consensus       401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~  430 (461)
                      ++|..++|.+.|.+.+.. +|...+.+.+.
T Consensus       336 ~~g~~~~~~~~g~l~~~~-~~~~~~~~~~~  364 (375)
T 2gfp_A          336 NIGSGVLASLSAMLPQTG-QGSLGLLMTLM  364 (375)
T ss_dssp             HHHHHCCSTTCTHHHHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCC-cccHHHHHHHH
Confidence            999999999999998864 47777766443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=100.00  E-value=5.2e-33  Score=280.48  Aligned_cols=404  Identities=13%  Similarity=0.067  Sum_probs=271.2

Q ss_pred             hcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccch
Q psy15069         18 FQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYL   96 (461)
Q Consensus        18 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~   96 (461)
                      +|.+..+.+++.+++.+++.+++++.|++.|| +|||+++..+.++.+++.+++++++|++.+++. |++.|+|.+...+
T Consensus        49 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~~~~~~~~  127 (491)
T 4aps_A           49 LHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGS-IILIIIGTGFLKP  127 (491)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHH-HHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHHHHHHHHhccc
Confidence            99999999999999999999999999999999 899999999999999999999999999999985 8999999999999


Q ss_pred             hHHHHHHhhhh-cc--chhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCc
Q psy15069         97 PAIVSVTCYFE-RL--RSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEP  173 (461)
Q Consensus        97 ~~~~~~~~~f~-~~--rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~  173 (461)
                      ...+++.+++| ++  |+.++++.+.+.++|..++|++++.+.+.+|||++|++.++..++..++.++..++...++++.
T Consensus       128 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (491)
T 4aps_A          128 NVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLR  207 (491)
T ss_dssp             HHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCSC
T ss_pred             hHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCcccccccccC
Confidence            99999999995 66  7778888999999999999999999999999999999988877766655554433321111000


Q ss_pred             ccCCCCCccccccccccccccc-ccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc--ccccCCch-h
Q psy15069        174 VEDGALPHLRIIIFEVKPKQRA-LTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT--TCLNLSDD-T  249 (461)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~  249 (461)
                      .+ +  +++       +++.++ ........         -.. .+.-- -....+... .++.....  ........ .
T Consensus       208 ~~-~--~~~-------~~~~~~~~~~~g~~l---------~~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  265 (491)
T 4aps_A          208 PT-D--PLA-------PEEVKPLLVKVSLAV---------AGF-IAIIV-VMNLVGWNS-LPAYINLLTIVAIAIPVFYF  265 (491)
T ss_dssp             CS-C--CCS-------HHHHHHHHHHCCCCC---------HHH-HHHHH-HHHHHSSCC-TTHHHHHHHHHHHHHHHHHH
T ss_pred             CC-C--ccc-------cchhHHHHHHHHHHH---------HHH-HHHHH-HHHhccCcc-cccchhhhhHHHHHHHHHHH
Confidence            00 0  000       000000 00000000         000 00000 000000000 00000000  00000000 0


Q ss_pred             hhhHhh--hhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069        250 KQTLRE--MLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVILGYISDR  326 (461)
Q Consensus       250 ~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr  326 (461)
                      ....++  .......+....+.+.+..++....+.....++|.+.++ .+.+..+.+...+...+..+++.++.|++.||
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r  345 (491)
T 4aps_A          266 AWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTA  345 (491)
T ss_dssp             HHHC------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHH
Confidence            000000  000011122234455555566666667777888888844 67776788888889999999999999999999


Q ss_pred             CCcchhH---HHHHHHHHHHHHHHHhhhhh---------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHH
Q psy15069        327 PCVNRLY---IYNGCLAICGAATVICAFCY---------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFG  394 (461)
Q Consensus       327 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  394 (461)
                      +++|+..   .+..++.+.++++++.....         +.+...+..++.|++.+...+....++.|.+|+++|+++.|
T Consensus       346 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g  425 (491)
T 4aps_A          346 WKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMS  425 (491)
T ss_dssp             TTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTH
T ss_pred             HhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHH
Confidence            8765422   22244555555554444422         66677778889999998888889999999999999999999


Q ss_pred             HHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069        395 LLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       395 ~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~  446 (461)
                      +.+....+|..++|.+.+.+.|.  ++...|...+++.+++.+..+...+..
T Consensus       426 ~~~~~~~~g~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (491)
T 4aps_A          426 MWFLSSSVGSALNAQLVTLYNAK--SEVAYFSYFGLGSVVLGIVLVFLSKRI  475 (491)
T ss_dssp             HHHHHHHHHHHHHHHHGGGGGGS--STTHHHHHTHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998875  477788888888777776665544433

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.97  E-value=4.6e-31  Score=260.75  Aligned_cols=357  Identities=13%  Similarity=0.103  Sum_probs=243.9

Q ss_pred             ehHH-HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHH---HHhhcccch-hhHHHHhh
Q psy15069         10 LFIE-FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACL---AVSVFAKNV-ITLCITIG   84 (461)
Q Consensus        10 ~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~---~l~~~~~~~-~~l~i~~~   84 (461)
                      ++|. +++++|.+..+.|++.+++.+++.+++++.|++.||+|||++++.+.++.+++.   ....+.+.. ..++. .+
T Consensus        29 ~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  107 (417)
T 2cfq_A           29 FFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILV-GS  107 (417)
T ss_dssp             THHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCH-HH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence            4555 456699999999999999999999999999999999999999998888776532   222232221 11222 24


Q ss_pred             ccccccccccchhHHHHHHhhhh---ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069         85 FGTGLGFGLIYLPAIVSVTCYFE---RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL  161 (461)
Q Consensus        85 ~l~G~g~~~~~~~~~~~~~~~f~---~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~  161 (461)
                      ++.|++.+..+++....+.++.+   ++++.++|....+.++|..++|++++.+.+ .+||+.|++.++..++..+.. +
T Consensus       108 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~-~  185 (417)
T 2cfq_A          108 IVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLL-F  185 (417)
T ss_dssp             HGGGSSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHS-C
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHH-H
Confidence            45555555544444445555553   567888899999999999999999999887 699999987766644333332 2


Q ss_pred             cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069        162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (461)
                      +++++ .+++++++     ++                                                  ++++++   
T Consensus       186 ~~~~~-~~~~~~~~-----~~--------------------------------------------------~~~~~~---  206 (417)
T 2cfq_A          186 FAKTD-APSSATVA-----NA--------------------------------------------------VGANHS---  206 (417)
T ss_dssp             SSCCC-CSCSSCSS-----SS--------------------------------------------------SSSCCC---
T ss_pred             HcCcc-cccccccc-----cc--------------------------------------------------cccccc---
Confidence            22221 11100000     00                                                  000000   


Q ss_pred             cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hC---CCchhhHHHHHHHhhhhhhhh
Q psy15069        242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RG---VTRSNASSLISIVGAANMVSR  317 (461)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g---~s~~~~~~~~~~~~~~~~~g~  317 (461)
                          +.+. ...     .+++|+|.++...+..+.....++.+..++|.|+++ ++   .+....+...++..++.+++.
T Consensus       207 ----~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  276 (417)
T 2cfq_A          207 ----AFSL-KLA-----LELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM  276 (417)
T ss_dssp             ----CCCH-HHH-----HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             ----cccH-HHH-----HHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHH
Confidence                0000 111     135788888877666555555555555678888744 33   224456777788888899999


Q ss_pred             hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH-H
Q psy15069        318 VILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL-L  396 (461)
Q Consensus       318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~  396 (461)
                      ++.|+++||+++|+..  ..+..+.++..+...+.++.+.+++..++.+++.+...+....++.|.+|++.|++++++ .
T Consensus       277 ~~~g~l~dr~g~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~  354 (417)
T 2cfq_A          277 FFAPLIINRIGGKNAL--LLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCF  354 (417)
T ss_dssp             HHHHHHHHHHCHHHHH--HHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcHHHHH--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            9999999997654433  345555555555556666776777677777877776677778899999999999999999 4


Q ss_pred             HHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069        397 LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       397 ~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      +....+|++++|.++|++.|..| |...|.+.+++.+++.+..+.
T Consensus       355 ~~~~~lg~~~gp~l~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~  398 (417)
T 2cfq_A          355 CFFKQLAMIFMSVLAGNMYESIG-FQGAYLVLGLVALGFTLISVF  398 (417)
T ss_dssp             TTTHHHHHHHHTHHHHTHHHHSH-HHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhHHHHHhhhhHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHh
Confidence            88888999999999999999765 888998888887777765543

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.96  E-value=4.8e-30  Score=258.68  Aligned_cols=392  Identities=13%  Similarity=0.120  Sum_probs=255.5

Q ss_pred             eeehHHHHhHhcC--------CCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhc-------
Q psy15069          8 GILFIEFTKVFQE--------GDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVF-------   72 (461)
Q Consensus         8 ~~~~~~~~~~~~~--------~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~-------   72 (461)
                      +...|.+.++++.        +..+.|++.+++.+++.+++++.|++.||+|||+++.++.+++.++.+++++       
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~  111 (491)
T 4gc0_A           32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTS  111 (491)
T ss_dssp             GGTHHHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSC
T ss_pred             HHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            4467888887743        3456889999999999999999999999999999999999999999999884       


Q ss_pred             -----------ccchhhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh--
Q psy15069         73 -----------AKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--  138 (461)
Q Consensus        73 -----------~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--  138 (461)
                                 ++|++++++. |+++|+|.|...+....++.|+.| ++|++..++.+.+..+|.++++.++..+...  
T Consensus       112 ~~~~~~~~~~~a~~~~~l~~~-R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  190 (491)
T 4gc0_A          112 INPDNTVPVYLAGYVPEFVIY-RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGD  190 (491)
T ss_dssp             SSSSSSCCGGGGGCHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             hcchhHHHHHHhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccc
Confidence                       7899999985 999999999999999999999995 8899999999999999998888887776543  


Q ss_pred             ------hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCC
Q psy15069        139 ------YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAIST  212 (461)
Q Consensus       139 ------~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (461)
                            .+||+.+.+..+..++..+... .  .+|+|++...+            +.++|.++..+.             
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~peSp~~L~~~------------~~~~~a~~~l~~-------------  242 (491)
T 4gc0_A          191 ASWLNTDGWRYMFASECIPALLFLMLLY-T--VPESPRWLMSR------------GKQEQAEGILRK-------------  242 (491)
T ss_dssp             TTTTTTTHHHHHHHTTHHHHHHHHHHGG-G--SCCCHHHHHHT------------TCHHHHHHHHHH-------------
T ss_pred             cccccchhhHHHhhhhhhhhhhhhhhhh-c--CCCChHHHHHc------------CchhHHHHhHHH-------------
Confidence                  3577777666555554433322 2  23344321110            000000000000             


Q ss_pred             CCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHH-HHHHHHHHhhccccchhhHhhH
Q psy15069        213 GPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFIL-FTISNIFTSIGFNVPYVYIVKL  291 (461)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  291 (461)
                           .  ..+      +...++..+.      .+..+...+........+.+.... .....+....+.+.+..+.|.+
T Consensus       243 -----~--~~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (491)
T 4gc0_A          243 -----I--MGN------TLATQAVQEI------KHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV  303 (491)
T ss_dssp             -----H--HHH------HHHHHHHHHH------HHHHHHHHHHTTHHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             -----h--cCC------chhHHHHHHH------HHHHHhhhhhhhHHHHhcccHHHHHHHHHHHHHHhhhhHHHhcchHH
Confidence                 0  000      0000000000      000000000000111233333333 4444455556666777788888


Q ss_pred             HHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhh--h-hh-hHHHHHHHHHHHhh
Q psy15069        292 AEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICA--F-CY-NYVELAIYAGVFGA  367 (461)
Q Consensus       292 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~~~~~l~g~  367 (461)
                      .+..+.+...........++..+++.++.+++.||+|+|+..+.  +....+++++.+.  . .. ..+...+..+++..
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  381 (491)
T 4gc0_A          304 FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII--GALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVA  381 (491)
T ss_dssp             HHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHH--HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhcc--chHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence            88889888888888888889999999999999999876665543  3333333332222  1 11 22222222222222


Q ss_pred             h-hhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc-----CCchHHHHHHhHHHHHHHHHH-H
Q psy15069        368 M-IGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST-----LSYSPAFFLAGGAIFVSGVML-F  440 (461)
Q Consensus       368 ~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~-----g~~~~~f~~~~~~~l~~~~~~-~  440 (461)
                      + .....+..+.+..|++|++.|+++.|+.+....+++++++.+...+.+..     ..+...|++.+++++++.+.. +
T Consensus       382 ~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~  461 (491)
T 4gc0_A          382 AFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWK  461 (491)
T ss_dssp             HHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence            2 22345677788999999999999999999999999999998877765431     125567778888877777665 4


Q ss_pred             HHHHhhHhH
Q psy15069        441 VIPSLQSYL  449 (461)
Q Consensus       441 ~~~~~~~~~  449 (461)
                      ++|+.+.+.
T Consensus       462 ~~PETkg~t  470 (491)
T 4gc0_A          462 FVPETKGKT  470 (491)
T ss_dssp             HCCCCTTCC
T ss_pred             eecCCCCCC
Confidence            556555443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.96  E-value=1.5e-28  Score=250.02  Aligned_cols=407  Identities=10%  Similarity=-0.011  Sum_probs=246.2

Q ss_pred             hHHHHhHhc------CCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-CcceeeehhhHHHHHHHHHhhccc-chhhHHHH
Q psy15069         11 FIEFTKVFQ------EGDGVTSWIASILVGVTLCSGPISSAFVNKY-GCRNVTICGAILGSACLAVSVFAK-NVITLCIT   82 (461)
Q Consensus        11 ~~~~~~~~~------~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~g~~~~~~~~~l~~~~~-~~~~l~i~   82 (461)
                      .+.+.+++|      .+..+.+++.+++.+++.+++++.|++.||+ |||+++..+.++.+++.+++++++ +++.+++.
T Consensus        36 ~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (524)
T 2xut_A           36 TPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTG  115 (524)
T ss_dssp             HHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred             HHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence            345667799      9999999999999999999999999999999 999999999999999999999998 99998875


Q ss_pred             hhccccccccccchhHHHHHHhhhh-ccchhhhhh---hccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q psy15069         83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGI---AVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLF  158 (461)
Q Consensus        83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi---~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~  158 (461)
                       |++.|++.+...+...+++.+++| ++|+++.++   ...+.++|.+++|++++.+.+.+|||+.|++.+++.++..++
T Consensus       116 -~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~  194 (524)
T 2xut_A          116 -LFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVF  194 (524)
T ss_dssp             -HHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence             899999999999999999999995 778776666   899999999999999999999899999999998887766555


Q ss_pred             HhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccc-----cccC-CCCC
Q psy15069        159 GILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQI-----DSKA-TVPE  232 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~  232 (461)
                      .++.++..+.+++++++.  .+.        .+......+.               .+..++....     +... ....
T Consensus       195 ~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~  249 (524)
T 2xut_A          195 FWLGRKRYIHMPPEPKDP--HGF--------LPVIRSALLT---------------KVEGKGNIGLVLALIGGVSAAYAL  249 (524)
T ss_dssp             HHSSSSSCCCCC---------------------------------------------CTTHHHHHHHHHHHHHHHHHHTG
T ss_pred             HHHhcccccccCCCCccc--hhH--------HHHHHHHHhh---------------hhcccCccchhhhhhhhhhhhhhh
Confidence            444333221111000000  000        0000000000               0000000000     0000 0000


Q ss_pred             CCCccccc---cc----ccCCchhhhhH---h---hhhccccccc-hhHHH---HHHHHHHHhhccccchhhHhhHHHHh
Q psy15069        233 SESTEDKT---TC----LNLSDDTKQTL---R---EMLDMELLRD-PIFIL---FTISNIFTSIGFNVPYVYIVKLAEQR  295 (461)
Q Consensus       233 ~~~~~~~~---~~----~~~~~~~~~~~---~---~~~~~~~l~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (461)
                      ...+....   .+    ...++..+.++   .   +.......++ +..+.   ..+...+....+......++.+..+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (524)
T 2xut_A          250 VNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDM  329 (524)
T ss_dssp             GGTTTTCSSHHHHHHHHHHHHHHHTGGGTHHHHSCCSCCSSSSTTTTTHHHHHHHHTTSHHHHTTTSSTTTHHHHHHHHS
T ss_pred             cccchhhhhhhhhhhhhhhhcccccchhhHHhhhhccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHhHHhc
Confidence            00000000   00    00000000000   0   0000001112 22211   11111122222222333444444444


Q ss_pred             CCCc-hhhHHHHHHHhhhhhhhhhhhhhcc----CCCCcc--hhHHHHHHHHHHHHHHHHhhhh---------hhHHHHH
Q psy15069        296 GVTR-SNASSLISIVGAANMVSRVILGYIS----DRPCVN--RLYIYNGCLAICGAATVICAFC---------YNYVELA  359 (461)
Q Consensus       296 g~s~-~~~~~~~~~~~~~~~~g~~~~g~l~----dr~~~~--~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  359 (461)
                      +.+. ...+.+.....++.+++.++.+++.    ||.+++  +...+..++++.+++++++.+.         .+.+.++
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (524)
T 2xut_A          330 VKPQWFEPAMMQALNPLLVMLLIPFNNFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQI  409 (524)
T ss_dssp             CCCSSSCHHHHHTTSGGGHHHHGGGTTTC------------CCHHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHH
T ss_pred             CCCeeecHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHH
Confidence            3322 2455666666666777777777764    443221  1223345556666666555543         2566777


Q ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC-Cc---------hHHHHHHh
Q psy15069        360 IYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL-SY---------SPAFFLAG  429 (461)
Q Consensus       360 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g-~~---------~~~f~~~~  429 (461)
                      +..++.|++.+...+....++.|.+|+++|++++|+.++...+|+.+||.+.|.+.|..+ +|         ...|++.+
T Consensus       410 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (524)
T 2xut_A          410 LPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKSPTVTEQIVQTGMSVTAFQMFFFA  489 (524)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccHHHHHH
Confidence            788899999999999999999999999999999999999999999999999999987431 12         23366667


Q ss_pred             HHHHHHHHHHHHHH
Q psy15069        430 GAIFVSGVMLFVIP  443 (461)
Q Consensus       430 ~~~l~~~~~~~~~~  443 (461)
                      ++.+++.+..+...
T Consensus       490 ~~~~~~~~~~~~~~  503 (524)
T 2xut_A          490 GFAILAAIVFALYA  503 (524)
T ss_dssp             HHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHH
Confidence            76666665554443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.65  E-value=4.1e-16  Score=156.75  Aligned_cols=175  Identities=14%  Similarity=0.148  Sum_probs=151.4

Q ss_pred             hhHHHHHHHHHHHhhccccchhhHhhHH-HH-----hCCCchhhHHHHHHHhhhhhhhhhhhhhccCC-CCcchhHHHHH
Q psy15069        265 PIFILFTISNIFTSIGFNVPYVYIVKLA-EQ-----RGVTRSNASSLISIVGAANMVSRVILGYISDR-PCVNRLYIYNG  337 (461)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~  337 (461)
                      +.++.+.+..++..++++....+++.|+ ++     +|++..+.+++.+...++..+++++.|+++|| +|+|+...  .
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~--~   90 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVF--W   90 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHH--H
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHH--H
Confidence            3567778888888888888989999998 45     89999999999999999999999999999999 77665544  5


Q ss_pred             HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc--hhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069        338 CLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR--LTNAFGLLLLFQGIASLVGPPIAGFLY  415 (461)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~gp~i~g~l~  415 (461)
                      +.++.+++.++..+.++.+.+++..++.|++.+...+...+++.|.+|+++  |+.+.++.+...++|..++|.++|.+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~  170 (491)
T 4aps_A           91 GGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQ  170 (491)
T ss_dssp             HHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHH
Confidence            666667777777788899999999999999999999999999999999988  788888899999999999999999999


Q ss_pred             cccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        416 DSTLSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       416 ~~~g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      +..| |+..|++.++..+++.+..+..
T Consensus       171 ~~~g-~~~~f~~~~~~~~~~~~~~~~~  196 (491)
T 4aps_A          171 EAAG-YHVAFSLAAIGMFIGLLVYYFG  196 (491)
T ss_dssp             HHSC-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhh-HHHHHHHHHHHHHHHHHHHHHh
Confidence            9864 9999999888777776665544

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.65  E-value=3.2e-16  Score=155.54  Aligned_cols=177  Identities=14%  Similarity=0.096  Sum_probs=153.1

Q ss_pred             cchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069        263 RDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC  342 (461)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  342 (461)
                      +.+.++...+..++.....+.+...+|.+.+++ .+..+.+++.+...++..++.++.|+++||+|+|+  ++..+.++.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~--~l~~~~~~~  102 (451)
T 1pw4_A           26 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV--FLPAGLILA  102 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSHHHHHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchH--HHHHHHHHH
Confidence            345567777788888888888889999999888 99999999999999999999999999999976554  444666777


Q ss_pred             HHHHHHhhh----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069        343 GAATVICAF----CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST  418 (461)
Q Consensus       343 ~~~~~~~~~----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~  418 (461)
                      +++.++..+    .++++.+++..++.|++.+...+...+++.|.+|+++|+++.|+.+....+|..+||.+++.+.+..
T Consensus       103 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~  182 (451)
T 1pw4_A          103 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF  182 (451)
T ss_dssp             HHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHT
T ss_pred             HHHHHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            777777777    8889999999999999999999999999999999999999999999999999999999999988876


Q ss_pred             CCchHHHHHHhHHHHHHHHHHHHH
Q psy15069        419 LSYSPAFFLAGGAIFVSGVMLFVI  442 (461)
Q Consensus       419 g~~~~~f~~~~~~~l~~~~~~~~~  442 (461)
                      |+|+..|++.+++.++..++.+..
T Consensus       183 g~w~~~f~~~~~~~~~~~~~~~~~  206 (451)
T 1pw4_A          183 NDWHAALYMPAFCAILVALFAFAM  206 (451)
T ss_dssp             CCSTTCTHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhh
Confidence            559999999988877766554433

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.65  E-value=9.1e-16  Score=151.70  Aligned_cols=174  Identities=10%  Similarity=0.089  Sum_probs=146.7

Q ss_pred             hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069        266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA  345 (461)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  345 (461)
                      .++.+.+..++..+........+|.+.+++|.+..+.+++.+...++..++.++.|+++||+|+|+.  +..+.++.+++
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~--l~~~~~~~~~~  104 (438)
T 3o7q_A           27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG--IITGLFLYALG  104 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHH--HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHH--HHHHHHHHHHH
Confidence            3445566666667777778888999889999999999999999999999999999999999765554  44556666666


Q ss_pred             HHHh---hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeee-cccCC-
Q psy15069        346 TVIC---AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY-DSTLS-  420 (461)
Q Consensus       346 ~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~-~~~g~-  420 (461)
                      .++.   .+.++++.+++.+++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+++.+. +..+. 
T Consensus       105 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~  184 (438)
T 3o7q_A          105 AALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQ  184 (438)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCC
T ss_pred             HHHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            6666   677899999999999999999999999999999999999999999999999999999999999998 65555 


Q ss_pred             -----------------------chHHHHHHhHHHHHHHHHHHH
Q psy15069        421 -----------------------YSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       421 -----------------------~~~~f~~~~~~~l~~~~~~~~  441 (461)
                                             |++.|++.+++.++..+..+.
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~  228 (438)
T 3o7q_A          185 SQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIML  228 (438)
T ss_dssp             CHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence                                   899998877776666655444

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.61  E-value=3.3e-16  Score=151.69  Aligned_cols=167  Identities=17%  Similarity=0.129  Sum_probs=145.9

Q ss_pred             HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069        268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV  347 (461)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~  347 (461)
                      +.+.+..++.......+...+|.+.+++|.+..+.+++.+...++..+++++.|+++||+|+|+..+  .+..+.+++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~~~~~   80 (375)
T 2gfp_A            3 LMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVIL--VGMSIFMLATL   80 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCH--HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH--HHHHHHHHHHH
Confidence            3456666777777778888899988999999999999999999999999999999999988776655  45556666667


Q ss_pred             HhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069        348 ICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL  427 (461)
Q Consensus       348 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~  427 (461)
                      +..+.++.+.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+++++.+..| |+..|++
T Consensus        81 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~  159 (375)
T 2gfp_A           81 VAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN-WRACYLF  159 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHH-HHHHHHH
T ss_pred             HHHHhccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcc-HHHHHHH
Confidence            777788999999999999999999999999999999999999999999999999999999999999998764 9999998


Q ss_pred             HhHHHHHHHH
Q psy15069        428 AGGAIFVSGV  437 (461)
Q Consensus       428 ~~~~~l~~~~  437 (461)
                      .+++.++..+
T Consensus       160 ~~~~~~~~~~  169 (375)
T 2gfp_A          160 LLVLCAGVTF  169 (375)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHH
Confidence            8887776665

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.59  E-value=4.8e-15  Score=150.22  Aligned_cols=174  Identities=13%  Similarity=0.027  Sum_probs=147.3

Q ss_pred             chhHHHHHHHHHHHhhccccchhhHhhHH-HHhC------CCchhhHHHHHHHhhhhhhhhhhhhhccCCC-CcchhHHH
Q psy15069        264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRG------VTRSNASSLISIVGAANMVSRVILGYISDRP-CVNRLYIY  335 (461)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g------~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~  335 (461)
                      ++.++.+.+..++..++++....+++.|+ +++|      ++..+.+++.+...++..++.++.|+++||+ |+|+..  
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~--   88 (524)
T 2xut_A           11 PRQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTI--   88 (524)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHH--
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH--
Confidence            34677788888888888888899999988 6789      9999999999999999999999999999997 655543  


Q ss_pred             HHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH---HHHHHHhhhhhcccee
Q psy15069        336 NGCLAICGAATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL---LLLFQGIASLVGPPIA  411 (461)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~g~~~gp~i~  411 (461)
                      ..+.++.+++.++..+.+ +.+.+++..++.|++.+...+...+++.|.+|+++|+++.+.   .+...++|..+||.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~  168 (524)
T 2xut_A           89 LWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSM  168 (524)
T ss_dssp             HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356666677777777777 888899999999999999999999999999999999776665   8999999999999999


Q ss_pred             eeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069        412 GFLYDSTLSYSPAFFLAGGAIFVSGVMLF  440 (461)
Q Consensus       412 g~l~~~~g~~~~~f~~~~~~~l~~~~~~~  440 (461)
                      |.+.+.. +|+..|++.+++.+++.+..+
T Consensus       169 ~~l~~~~-g~~~~f~~~~~~~~~~~~~~~  196 (524)
T 2xut_A          169 PLLLKNF-GAAVAFGIPGVLMFVATVFFW  196 (524)
T ss_dssp             THHHHTS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhccc-cHHHHHHHHHHHHHHHHHHHH
Confidence            9999876 499999988887776665544

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.23  E-value=1.3e-11  Score=121.33  Aligned_cols=142  Identities=15%  Similarity=0.178  Sum_probs=118.0

Q ss_pred             CccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHH
Q psy15069         22 DGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVS  101 (461)
Q Consensus        22 ~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~  101 (461)
                      ....++..++..+...++.++.|++.||+|+|+++..+.++.+++.++.++.++.+.+++. .++.+++.+...+....+
T Consensus       258 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~  336 (417)
T 2cfq_A          258 TRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVIL-KTLHMFEVPFLLVGCFKY  336 (417)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            4556888888888888899999999999999999999999988888888888887777764 567777766666666778


Q ss_pred             HHhhhh-ccchhhhhhh-ccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069        102 VTCYFE-RLRSLATGIA-VCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP  164 (461)
Q Consensus       102 ~~~~f~-~~rg~a~gi~-~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~  164 (461)
                      +.+.+| +.|+.+.++. +++.++|..++|.+.+.+.+.+|++..|.+.++++++..+..++..+
T Consensus       337 ~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~  401 (417)
T 2cfq_A          337 ITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLS  401 (417)
T ss_dssp             HHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhc
Confidence            888885 7799999994 88889999999999999999889999999998888877766555444

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.23  E-value=1.8e-11  Score=122.73  Aligned_cols=158  Identities=13%  Similarity=0.006  Sum_probs=115.2

Q ss_pred             ccchhhHhhHHHHhC--------CCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhh---
Q psy15069        282 NVPYVYIVKLAEQRG--------VTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICA---  350 (461)
Q Consensus       282 ~~~~~~~~~~~~~~g--------~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---  350 (461)
                      ..+...+|.+.++++        .+..+.+++.+.+.++.++|.+++|+++||+|||+.++  ++.++..++.++..   
T Consensus        29 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~--~~~~l~~i~~i~~a~~~  106 (491)
T 4gc0_A           29 AVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK--IAAVLFFISGVGSAWPE  106 (491)
T ss_dssp             HGGGGTHHHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHH--HHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHHHHHHHHHHh
Confidence            344445555544442        23345678888899999999999999999977665544  55555555555544   


Q ss_pred             ---------------hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069        351 ---------------FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY  415 (461)
Q Consensus       351 ---------------~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~  415 (461)
                                     ++++++.+++.+++.|++.|...+..+.++.|..|+++|+...++.+....+|..+++.++..+.
T Consensus       107 ~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~  186 (491)
T 4gc0_A          107 LGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIA  186 (491)
T ss_dssp             TTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhc
Confidence                           46789999999999999999999999999999999999999999999999999888887766554


Q ss_pred             ccc-------CCchHHHHHHhHHHHHHHHHHHH
Q psy15069        416 DST-------LSYSPAFFLAGGAIFVSGVMLFV  441 (461)
Q Consensus       416 ~~~-------g~~~~~f~~~~~~~l~~~~~~~~  441 (461)
                      +..       ..|+..+....+..++..+..+.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (491)
T 4gc0_A          187 RSGDASWLNTDGWRYMFASECIPALLFLMLLYT  219 (491)
T ss_dssp             TTSCTTTTTTTHHHHHHHTTHHHHHHHHHHGGG
T ss_pred             cccccccccchhhHHHhhhhhhhhhhhhhhhhc
Confidence            322       12555555555554444444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	461
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	7e-09
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	1e-04
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	8e-04
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	5e-06
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	6e-06

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 55.5 bits (132), Expect = 7e-09
 Identities = 38/241 (15%), Positives = 74/241 (30%), Gaps = 10/241 (4%)

Query: 225 DSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVP 284
            S    P  E   D     N   + + T +++    +L + +     I+N+F  +     
Sbjct: 209 QSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGI 268

Query: 285 YVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344
             +     ++      + SS    +     +   +L                G   +   
Sbjct: 269 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 328

Query: 345 ATVICAFCY----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ 400
                 +      N     I   V G +I   V L  +  ++L        A G   LF 
Sbjct: 329 TIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG 388

Query: 401 GI-ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRKEKKLSS 459
            +  S+    I G+  D          + GG+I    +++ V+        KR+ ++L  
Sbjct: 389 YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG-----EKRRHEQLLQ 443

Query: 460 E 460
           E
Sbjct: 444 E 444

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 24/155 (15%), Positives = 50/155 (32%), Gaps = 2/155 (1%)

Query: 24  VTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI 83
                    +  TL  G +S                 ++  A +   +      T+ +  
Sbjct: 290 AYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMIC 349

Query: 84  GFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPII-DYTVREYGW 141
               G       +   +       ++    A G       LG  + A  I  YTV  +GW
Sbjct: 350 MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 409

Query: 142 KITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVED 176
               +V+    + AV+  I++   E++  E+ +++
Sbjct: 410 DGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE 444

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 39.3 bits (90), Expect = 8e-04
 Identities = 25/182 (13%), Positives = 53/182 (29%), Gaps = 7/182 (3%)

Query: 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD 325
           IF+          +      + +  L EQ G +R +    +S +  A   S+ I+G +SD
Sbjct: 26  IFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSD 84

Query: 326 RPCVNRLYIYNGCLAICGAATVICAFCY----NYVELAIYAGVFGAMIGAYVGLTSVILV 381
           R   N        L +  A  +   F      +   + +   + G   G         +V
Sbjct: 85  R--SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMV 142

Query: 382 DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV 441
                        +      +   + P +          +  A ++      +  +  F 
Sbjct: 143 HWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFA 202

Query: 442 IP 443
           + 
Sbjct: 203 MM 204

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 46.3 bits (108), Expect = 5e-06
 Identities = 26/208 (12%), Positives = 62/208 (29%), Gaps = 3/208 (1%)

Query: 250 KQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIV 309
                  L +EL R P     ++  I  S  ++V              T    + +   V
Sbjct: 205 HSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYV 264

Query: 310 GAANMVSRVILGYISDRPCVNRLYIYNGCL--AICGAATVICAFCYNYVELAIYAGVFGA 367
                +    + + +              L   I     +  +F  + +E+ I   +   
Sbjct: 265 TTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMF 324

Query: 368 MIGAYVGLTSVILVDLLGLDRLTNAFGLLL-LFQGIASLVGPPIAGFLYDSTLSYSPAFF 426
            +   +      +     +      + +    F+ +A +    +AG +Y+S         
Sbjct: 325 EVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLV 384

Query: 427 LAGGAIFVSGVMLFVIPSLQSYLLKRKE 454
           L   A+  + + +F +       L R++
Sbjct: 385 LGLVALGFTLISVFTLSGPGPLSLLRRQ 412

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 45.9 bits (107), Expect = 6e-06
 Identities = 25/208 (12%), Positives = 61/208 (29%), Gaps = 9/208 (4%)

Query: 259 MELLRDPIFILFTISNIFTSIGFNVPYVYI-VKLAEQRGVTRSNASSLISIVGAANMVSR 317
           M  L++  F +F +   F        + +  + L +   +++S+   + + +   +++ +
Sbjct: 1   MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQ 60

Query: 318 VILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTS 377
            + G +SD+  +         +                  L     V   + G Y+G   
Sbjct: 61  PLFGLLSDK--LGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCF 118

Query: 378 VILVDLL------GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA 431
                 +         R    FG   +F  +   +G  I G ++     +          
Sbjct: 119 NAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCAL 178

Query: 432 IFVSGVMLFVIPSLQSYLLKRKEKKLSS 459
           I    +      +  S  +        S
Sbjct: 179 ILAVLLFFAKTDAPSSATVANAVGANHS 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	461
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	100.0
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.96
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.61
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.33

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.6e-38  Score=308.79  Aligned_cols=382  Identities=15%  Similarity=0.143  Sum_probs=290.9

Q ss_pred             eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc----cchhhHH
Q psy15069          5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA----KNVITLC   80 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~----~~~~~l~   80 (461)
                      +.+++..|.++ |+|+|.+++|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.++++++    ++++.++
T Consensus        42 ~~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (447)
T d1pw4a_          42 KNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMF  120 (447)
T ss_dssp             TSHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHH
T ss_pred             HHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHH
Confidence            35677778665 589999999999999999999999999999999999999999999999999988776    4777788


Q ss_pred             HHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHH
Q psy15069         81 ITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLF  158 (461)
Q Consensus        81 i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~  158 (461)
                      +. |++.|++.+..+++...++.+++| |+|++++++...+.++|..++|+++..+.... +||+.|++.+++.++..++
T Consensus       121 ~~-~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  199 (447)
T d1pw4a_         121 VL-LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALF  199 (447)
T ss_dssp             HH-HHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHH
T ss_pred             HH-HHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHH
Confidence            74 899999999999999999999995 78999999999999999999999999877755 8999999999988877776


Q ss_pred             HhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccc
Q psy15069        159 GILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTED  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (461)
                      .+++.++++++......++. +++                                   .+++.          +++.  
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~-~~~-----------------------------------~~~~~----------~~~~--  231 (447)
T d1pw4a_         200 AFAMMRDTPQSCGLPPIEEY-KND-----------------------------------YPDDY----------NEKA--  231 (447)
T ss_dssp             HHHHCCCSSTTTCCCSCTTT-CCC--------------------------------------------------------
T ss_pred             HHHhcccchhhcccchhhhh-hhh-----------------------------------cccch----------hhcc--
Confidence            66655544332211100000 000                                   00000          0000  


Q ss_pred             ccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069        239 KTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSR  317 (461)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~  317 (461)
                               +.+...++......+++|.++......++.....+....+.|.|+ +..+.+..+.+.......+..++++
T Consensus       232 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (447)
T d1pw4a_         232 ---------EQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGT  302 (447)
T ss_dssp             -------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------ccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhh
Confidence                     000011111122468899999999988888888889999999998 6679999999999999999999999


Q ss_pred             hhhhhccCCCCcchhHHH-HHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHH
Q psy15069        318 VILGYISDRPCVNRLYIY-NGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFG  394 (461)
Q Consensus       318 ~~~g~l~dr~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  394 (461)
                      ++.|++.||.+++++... .....+..+.......  ..+.+...+..++.|++.+...+....+..|.+|++.++++.|
T Consensus       303 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g  382 (447)
T d1pw4a_         303 LLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAG  382 (447)
T ss_dssp             HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHH
T ss_pred             hhhhhhhhhccccccccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            999999999765544322 2222222233332222  3456677777788898888888888899999999999999999


Q ss_pred             HHHHHHHhh-hhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069        395 LLLLFQGIA-SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ  446 (461)
Q Consensus       395 ~~~~~~~~g-~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~  446 (461)
                      +.+...+++ ..++|.+.|++.|..| |+..|++.+++.+++.++.+.+...+
T Consensus       383 ~~~~~~~~~g~~~~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (447)
T d1pw4a_         383 FTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGE  434 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSC-SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999988874 5668999999999986 88888888777777766655554433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.2e-29  Score=243.67  Aligned_cols=362  Identities=12%  Similarity=0.049  Sum_probs=250.0

Q ss_pred             ehHH-HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHH---Hhhc
Q psy15069         10 LFIE-FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCI---TIGF   85 (461)
Q Consensus        10 ~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i---~~~~   85 (461)
                      ++|. +.+++|.|.+++|++.+++.+++.+++++.|.+.||+|||++++.+.++..++.++..+..+......   ..++
T Consensus        29 ~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (417)
T d1pv7a_          29 FFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSI  108 (417)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHH
T ss_pred             HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence            3454 56779999999999999999999999999999999999999999999999998888777665443321   1244


Q ss_pred             cccccccccchhHHHHHHhhh-h--ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069         86 GTGLGFGLIYLPAIVSVTCYF-E--RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILL  162 (461)
Q Consensus        86 l~G~g~~~~~~~~~~~~~~~f-~--~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~  162 (461)
                      +.+.+.+.............. +  +++.++.+......+.+..++|.+++.+.+ .+|+..+........+..+..++.
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~  187 (417)
T d1pv7a_         109 VGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFA  187 (417)
T ss_dssp             HTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhcccccccccccccccc-ccccccccchhhHHHHHHHHHHHH
Confidence            555555555555544444333 2  456677888888889999999999988776 567777776666666665555555


Q ss_pred             ccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069        163 RPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC  242 (461)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (461)
                      .++++.+++++++                                              ++         ++++      
T Consensus       188 ~~~~~~~~~~~~~----------------------------------------------~~---------~~~~------  206 (417)
T d1pv7a_         188 KTDAPSSATVANA----------------------------------------------VG---------ANHS------  206 (417)
T ss_dssp             CCCSCSSSCSSHH----------------------------------------------HH---------SCCC------
T ss_pred             hcccccchhhhhh----------------------------------------------hh---------hhcc------
Confidence            4443222211000                                              00         0000      


Q ss_pred             ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH----HHhCCCchhhHHHHHHHhhhhhhhhh
Q psy15069        243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA----EQRGVTRSNASSLISIVGAANMVSRV  318 (461)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~s~~~~~~~~~~~~~~~~~g~~  318 (461)
                          ...+....     +..+++..+......+.............+.+.    ++.+.+....+.......++..++..
T Consensus       207 ----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (417)
T d1pv7a_         207 ----AFSLKLAL-----ELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMF  277 (417)
T ss_dssp             ----CCCHHHHH-----HHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ----cccccccc-----cccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhcccccccccccccchh
Confidence                00001111     112333333333322222222222222222222    33445666777888888899999999


Q ss_pred             hhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHH-H
Q psy15069        319 ILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLL-L  397 (461)
Q Consensus       319 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~  397 (461)
                      +.+++.||.  +++..+..+..+.++..+...+.++.+..++..++.|++.+...+....++.|.+|+++|+++.|+. +
T Consensus       278 ~~~~l~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (417)
T d1pv7a_         278 FAPLIINRI--GGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFC  355 (417)
T ss_dssp             THHHHHHHH--CHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHT
T ss_pred             hhhhhhccc--ccccchhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHH
Confidence            999999995  4444455667777777777888889999999999999999999999999999999999999999985 4


Q ss_pred             HHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069        398 LFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL  445 (461)
Q Consensus       398 ~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~  445 (461)
                      ....+|.+++|.+.|++.|..| |+..|++.+++.++..++.++..+.
T Consensus       356 ~~~~~g~~i~~~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~l~~  402 (417)
T d1pv7a_         356 FFKQLAMIFMSVLAGNMYESIG-FQGAYLVLGLVALGFTLISVFTLSG  402 (417)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            5677999999999999999986 9999999888887777665554433

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=4.3e-16  Score=151.67  Aligned_cols=175  Identities=11%  Similarity=0.088  Sum_probs=139.4

Q ss_pred             HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069        267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT  346 (461)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  346 (461)
                      +...+++++..+.....+....| ++++.|+|.++.+++.+.+.++..++.++.|+++||+|+|+.  +..+.++.+++.
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~--~~~~~~~~~~~~  103 (447)
T d1pw4a_          27 FLGIFFGYAAYYLVRKNFALAMP-YLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF--LPAGLILAAAVM  103 (447)
T ss_dssp             HHHHHHHHHHHHHHHTSHHHHHH-HTTSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH--HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH--HHHHHHHHHHHH
Confidence            33344445555554445555555 456789999999999999999999999999999999765554  445556666665


Q ss_pred             HHhhhh----hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069        347 VICAFC----YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS  422 (461)
Q Consensus       347 ~~~~~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~  422 (461)
                      ++..+.    ++++.+++..++.|++.+...+....++.|.+|+++|++++|+.+....+|..++|.+++.+.+..++|+
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~  183 (447)
T d1pw4a_         104 LFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWH  183 (447)
T ss_dssp             HHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCST
T ss_pred             hhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhccc
Confidence            555544    3667888899999999999999999999999999999999999999999999999999998888777899


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHH
Q psy15069        423 PAFFLAGGAIFVSGVMLFVIPS  444 (461)
Q Consensus       423 ~~f~~~~~~~l~~~~~~~~~~~  444 (461)
                      ..|++.+.+.++..++.+...+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~  205 (447)
T d1pw4a_         184 AALYMPAFCAILVALFAFAMMR  205 (447)
T ss_dssp             TCTHHHHHHHHHHHHHHHHHCC
T ss_pred             ccchhhhhhHHHHHHHHHHhcc
Confidence            9999988888777776665543

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.33  E-value=3.5e-13  Score=128.38  Aligned_cols=175  Identities=13%  Similarity=0.225  Sum_probs=118.3

Q ss_pred             cccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069        261 LLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL  339 (461)
Q Consensus       261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~  339 (461)
                      .+|||.+|.+.+..++..+......+++|.|+ ++.|.|..+.|++.++..++..+++++.|+++||+|+||..+.  +.
T Consensus         3 ~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~--~~   80 (417)
T d1pv7a_           3 YLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLW--II   80 (417)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHH--HH
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH--HH
Confidence            57999999999999999999888889999988 6689999999999999999999999999999999887776553  33


Q ss_pred             HHHHHHHHHhhhhhhHHH----HHHHHHHHhhhhhhHHHHHHHHHHHhcC--ccchhHHHHHHHHHHHhhhhhccceeee
Q psy15069        340 AICGAATVICAFCYNYVE----LAIYAGVFGAMIGAYVGLTSVILVDLLG--LDRLTNAFGLLLLFQGIASLVGPPIAGF  413 (461)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~----~~~~~~l~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~gp~i~g~  413 (461)
                      ....++........+...    ..+...+.+.+.+...........+..+  .+++....+........+..++|.+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (417)
T d1pv7a_          81 TGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGI  160 (417)
T ss_dssp             HHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccc
Confidence            333333333333332222    2233334444444333333333332222  2344556777788888899999999999


Q ss_pred             eecccCCchHHHHHHhHHHHHHHHHH
Q psy15069        414 LYDSTLSYSPAFFLAGGAIFVSGVML  439 (461)
Q Consensus       414 l~~~~g~~~~~f~~~~~~~l~~~~~~  439 (461)
                      +.+..  +...+........+..+..
T Consensus       161 l~~~~--~~~~~~~~~~~~~~~~~~~  184 (417)
T d1pv7a_         161 MFTIN--NQFVFWLGSGCALILAVLL  184 (417)
T ss_dssp             HHHHC--HHHHHHHHHHHHHHHHHHH
T ss_pred             ccccc--ccccccchhhHHHHHHHHH
Confidence            88863  4445544444444443333