Psyllid ID: psy15111

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
Protein Sequence
MADNQSSGDAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQNIDFTGNQTQDLWCRSLV
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHcccccccccccccccccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcEEccccccccHHHccc
Coil and Loop (DISEMBL)
madnqssgdaITLGLIERVTKNttlmadnqssgdgveTFAFQAEIAQLMSLIINTFYSNKEIFLRELIsnssdvqnidftgnqtqdLWCRSLV
Flexible Loop (DISEMBL)
madnqssgdaiTLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNssdvqnidftgnqtqdlwcrslv
Low Complexity Region (SEG)
MADNQSSGDAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQNIDFTGNQTQDLWCRSLV
Disordered region (IsUnstruct)
**********ITLGLIERVTKNTTL*********GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQNIDFTGNQTQDLWC****
Disordered Region (DISOPRED)
*****************************************QAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQNIDFTGNQTQD*WCRSLV
Disordered Region (DISEMBL)
********DAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQNIDFTGNQTQDLWCRSLV
Disordered Region (DISPRO)
*******GDAITLGLIERVTK*************GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQNIDFTGNQTQDLWC****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MADNQSSGDAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQNIDFTGNQTQDLWCRSLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	93	2.2.26 [Sep-21-2011]
Q14568	343	Putative heat shock prote	yes	N/A	0.494	0.134	0.847	1e-14
Q04619	725	Heat shock cognate protei	yes	N/A	0.473	0.060	0.886	3e-14
P11501	728	Heat shock protein HSP 90	no	N/A	0.483	0.061	0.866	5e-14
P46633	733	Heat shock protein HSP 90	yes	N/A	0.537	0.068	0.8	6e-14
P30946	694	Heat shock protein HSP 90	no	N/A	0.537	0.072	0.8	6e-14
A5A6K9	733	Heat shock protein HSP 90	yes	N/A	0.537	0.068	0.8	6e-14
Q76LV2	733	Heat shock protein HSP 90	yes	N/A	0.537	0.068	0.8	7e-14
O16087	269	Heat shock protein 83 (Fr	N/A	N/A	0.397	0.137	0.972	7e-14
O16068	269	Heat shock protein 83 (Fr	N/A	N/A	0.419	0.144	0.923	7e-14
O02705	733	Heat shock protein HSP 90	yes	N/A	0.537	0.068	0.8	7e-14

>sp|Q14568|HS902_HUMAN Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%)

Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

Putative molecular chaperone that may promote the maturation, structural maintenance and proper regulation of specific target proteins.
Homo sapiens (taxid: 9606)

>sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/44 (88%), Positives = 40/44 (90%)

Query: 30 QSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          Q   D VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 6  QHGEDEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASD 49

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Gallus gallus (taxid: 9031)

>sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3

 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +Q   + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  DQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 53

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Gallus gallus (taxid: 9031)

>sp|P46633|HS90A_CRIGR Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/50 (80%), Positives = 41/50 (82%)

Query: 24 TLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 5  TQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Cricetulus griseus (taxid: 10029)

>sp|P30946|HS90A_RABIT Heat shock protein HSP 90-alpha OS=Oryctolagus cuniculus GN=HSP90AA1 PE=1 SV=2

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/50 (80%), Positives = 41/50 (82%)

Query: 24 TLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 5  TQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Oryctolagus cuniculus (taxid: 9986)

>sp|A5A6K9|HS90A_PANTR Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/50 (80%), Positives = 41/50 (82%)

Query: 24 TLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 5  TQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Pan troglodytes (taxid: 9598)

>sp|Q76LV2|HS90A_BOVIN Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/50 (80%), Positives = 41/50 (82%)

Query: 24 TLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 5  TQAQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Bos taurus (taxid: 9913)

>sp|O16087|HSP83_DROMI Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/37 (97%), Positives = 37/37 (100%)

Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 6  ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASD 42

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Drosophila miranda (taxid: 7229)

>sp|O16068|HSP83_DROPB Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/39 (92%), Positives = 37/39 (94%)

Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
           ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD 
Sbjct: 5  AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDA 43

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Drosophila pseudoobscura bogotana (taxid: 46244)

>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/50 (80%), Positives = 41/50 (82%)

Query: 24 TLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 5  TQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.

Sus scrofa (taxid: 9823)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
388503300	261	unknown [Lotus japonicus]	0.505	0.180	0.88	4e-14
281333437	712	90 kDa heat shock protein [Thitarodes pu	0.473	0.061	0.933	1e-13
409053072	716	heat shock protein 90 [Grapholita molest	0.483	0.062	0.913	1e-13
375112069	716	heat shock protein 90, partial [Cydia po	0.483	0.062	0.913	1e-13
301299151	732	heat shock protein 90 [Macrobrachium nip	0.526	0.066	0.816	1e-13
295722	85	heat shock protein 90 [Gallus gallus]	0.483	0.529	0.866	1e-13
116667188	256	Chain A, Structure Of Human Hsp90-Alpha	0.655	0.238	0.682	2e-13
113208383	717	heat shock protein 90 [Mamestra brassica	0.473	0.061	0.909	2e-13
229597855	249	Chain A, Structure Of Hsp90 Bound With A	0.591	0.220	0.7	2e-13
302565977	249	Chain A, Structure Of Hsp90 With Small M	0.591	0.220	0.7	2e-13

>gi|388503300|gb|AFK39716.1| unknown [Lotus japonicus]

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/50 (88%), Positives = 45/50 (90%), Gaps = 3/50 (6%)

Query: 26 MADN--QSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          M+D   Q SGD VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1  MSDKMEQESGD-VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 49

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|281333437|gb|ADA61011.1| 90 kDa heat shock protein [Thitarodes pui]

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/45 (93%), Positives = 43/45 (95%), Gaps = 1/45 (2%)

Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          NQ +GD VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 5  NQGAGD-VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 48

Source: Thitarodes pui

Species: Thitarodes pui

Genus: Thitarodes

Family: Hepialidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|409053072|gb|AFV09397.1| heat shock protein 90 [Grapholita molesta]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/46 (91%), Positives = 44/46 (95%), Gaps = 1/46 (2%)

Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D Q+SG+ VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 4  DMQTSGE-VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 48

Source: Grapholita molesta

Species: Grapholita molesta

Genus: Grapholita

Family: Tortricidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|375112069|gb|AFA35118.1| heat shock protein 90, partial [Cydia pomonella]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/46 (91%), Positives = 44/46 (95%), Gaps = 1/46 (2%)

Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D Q+SG+ VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 4  DMQTSGE-VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 48

Source: Cydia pomonella

Species: Cydia pomonella

Genus: Cydia

Family: Tortricidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|301299151|gb|ADK66920.1| heat shock protein 90 [Macrobrachium nipponense]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/49 (81%), Positives = 43/49 (87%)

Query: 25 LMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          + AD   + + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1  MAADETQTAEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 49

Source: Macrobrachium nipponense

Species: Macrobrachium nipponense

Genus: Macrobrachium

Family: Palaemonidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|295722|emb|CAA33132.1| heat shock protein 90 [Gallus gallus]

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +Q   + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  DQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 53

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|116667188|pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 gi|116667189|pdb|2FWZ|A Chain A, Structure Of Human Hsp90-alpha Bound To The Potent Water Soluble Inhibitor Pu-h71 gi|116667585|pdb|2H55|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-Dz8 gi|349587602|pdb|3O0I|A Chain A, Structure Of The Human Hsp90-Alpha N-Domain Bound To The Hsp90 Inhibitor Pu-H54

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 46/63 (73%), Gaps = 2/63 (3%)

Query: 14 GLIERVT--KNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS 71
          GL+ R +     T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS
Sbjct: 13 GLVPRGSHMPEETQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS 72

Query: 72 SDV 74
          SD 
Sbjct: 73 SDA 75

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|113208383|dbj|BAF03554.1| heat shock protein 90 [Mamestra brassicae]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/44 (90%), Positives = 41/44 (93%)

Query: 30 QSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          Q+ G  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 6  QTDGAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 49

Source: Mamestra brassicae

Species: Mamestra brassicae

Genus: Mamestra

Family: Noctuidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|229597855|pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment gi|242556486|pdb|3FT8|A Chain A, Structure Of Hsp90 Bound With A Noval Fragment. gi|300508416|pdb|3HYY|A Chain A, Crystal Structure Of Hsp90 With Fragment 37-D04 gi|300508417|pdb|3HYZ|A Chain A, Crystal Structure Of Hsp90 With Fragment 42-C03 gi|300508418|pdb|3HYZ|B Chain B, Crystal Structure Of Hsp90 With Fragment 42-C03 gi|300508419|pdb|3HZ1|A Chain A, Crystal Structure Of Hsp90 With Fragments 37-D04 And 42-C03 gi|300508420|pdb|3HZ5|A Chain A, Crystal Structure Of Hsp90 With Fragment Z064 gi|302565935|pdb|2XAB|A Chain A, Structure Of Hsp90 With An Inhibitor Bound gi|302565936|pdb|2XAB|B Chain B, Structure Of Hsp90 With An Inhibitor Bound gi|302565980|pdb|2XJX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound gi|305677626|pdb|2XDK|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound gi|305677627|pdb|2XDL|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound gi|305677628|pdb|2XDS|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound gi|305677630|pdb|2XDX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound gi|305677631|pdb|2XHR|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound gi|305677632|pdb|2XHT|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound gi|305677636|pdb|2XK2|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 5/60 (8%)

Query: 14 GLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          GL+ R +     M + +     VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 GLVPRGSHMDQPMEEEE-----VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 67

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|302565977|pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound gi|305677633|pdb|2XHX|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 5/60 (8%)

Query: 14 GLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          GL+ R +     M + +     VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 GLVPRGSHMDQPMEEEE-----VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 67

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
UNIPROTKB|H0YJF5	52	HSP90AA1 "Heat shock protein H	0.419	0.75	1.0	1.4e-14
UNIPROTKB|F1NKM6	220	F1NKM6 "Uncharacterized protei	0.526	0.222	0.795	1.8e-14
UNIPROTKB|F1NKM8	217	F1NKM8 "Uncharacterized protei	0.526	0.225	0.795	1.8e-14
UNIPROTKB|J9NTW0	239	SLC29A1 "Uncharacterized prote	0.548	0.213	0.788	1.8e-14
UNIPROTKB|G3V2J8	174	HSP90AA1 "Heat shock protein H	0.537	0.287	0.8	1.8e-14
UNIPROTKB|F1LTA7	643	F1LTA7 "Uncharacterized protei	0.494	0.071	0.847	4.1e-14
UNIPROTKB|Q14568	343	HSP90AA2 "Putative heat shock	0.537	0.145	0.8	5.1e-14
ZFIN|ZDB-GENE-031001-3	734	hsp90aa1.2 "heat shock protein	0.408	0.051	1.0	7.9e-14
UNIPROTKB|Q5T9W8	168	HSP90AB1 "Heat shock protein H	0.408	0.226	0.973	7.9e-14
UNIPROTKB|D4A2S2	249	D4A2S2 "Uncharacterized protei	0.430	0.160	0.9	1.3e-13

UNIPROTKB|H0YJF5 HSP90AA1 "Heat shock protein HSP 90-alpha" [Homo sapiens (taxid:9606)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query:    36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
             VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV
Sbjct:     2 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 40

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|F1NKM6 F1NKM6 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 39/49 (79%), Positives = 42/49 (85%)

Query:    25 LMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
             +   +Q   + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct:     5 VQTQDQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 53

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0030235 "nitric-oxide synthase regulator activity" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045040 "protein import into mitochondrial outer membrane" evidence=IEA

GO:0045429 "positive regulation of nitric oxide biosynthetic process" evidence=IEA

GO:0051131 "chaperone-mediated protein complex assembly" evidence=IEA

UNIPROTKB|F1NKM8 F1NKM8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 39/49 (79%), Positives = 42/49 (85%)

Query:    25 LMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
             +   +Q   + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct:     5 VQTQDQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 53

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0030235 "nitric-oxide synthase regulator activity" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045040 "protein import into mitochondrial outer membrane" evidence=IEA

GO:0045429 "positive regulation of nitric oxide biosynthetic process" evidence=IEA

GO:0051131 "chaperone-mediated protein complex assembly" evidence=IEA

UNIPROTKB|J9NTW0 SLC29A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 41/52 (78%), Positives = 44/52 (84%)

Query:    24 TLMADNQSSGDG-VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
             T M +    G+  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SDV
Sbjct:   176 TWMPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDV 227

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA

UNIPROTKB|G3V2J8 HSP90AA1 "Heat shock protein HSP 90-alpha" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 40/50 (80%), Positives = 41/50 (82%)

Query:    24 TLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
             T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct:     5 TQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|F1LTA7 F1LTA7 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 184 (69.8 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
 Identities = 39/46 (84%), Positives = 40/46 (86%)

Query:    28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
             D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct:     3 DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 48

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|Q14568 HSP90AA2 "Putative heat shock protein HSP 90-alpha A2" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 5.1e-14, P = 5.1e-14
 Identities = 40/50 (80%), Positives = 41/50 (82%)

Query:    24 TLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
             T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct:     5 TQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-031001-3 hsp90aa1.2 "heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2" [Danio rerio (taxid:7955)]

 Score = 182 (69.1 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)

Query:    36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
             VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct:    15 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 52

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5T9W8 HSP90AB1 "Heat shock protein HSP 90-beta" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 37/38 (97%), Positives = 38/38 (100%)

Query:    36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
             VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD
Sbjct:    12 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASD 49

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|D4A2S2 D4A2S2 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 36/40 (90%), Positives = 39/40 (97%)

Query:    34 DGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
             +GVETFAFQAEIA LMSLIINTFYSNKEIFL+ELISN+SD
Sbjct:    10 EGVETFAFQAEIAYLMSLIINTFYSNKEIFLQELISNASD 49

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P07901	HS90A_MOUSE	No assigned EC number	0.8	0.5376	0.0682	yes	N/A
Q14568	HS902_HUMAN	No assigned EC number	0.8478	0.4946	0.1341	yes	N/A
Q9GKX7	HS90A_HORSE	No assigned EC number	0.8	0.5376	0.0682	yes	N/A
P46633	HS90A_CRIGR	No assigned EC number	0.8	0.5376	0.0682	yes	N/A
P36181	HSP80_SOLLC	No assigned EC number	0.9473	0.4086	0.0543	N/A	N/A
Q90474	H90A1_DANRE	No assigned EC number	1.0	0.4086	0.0524	no	N/A
O02705	HS90A_PIG	No assigned EC number	0.8	0.5376	0.0682	yes	N/A
O16068	HSP83_DROPB	No assigned EC number	0.9230	0.4193	0.1449	N/A	N/A
Q76LV2	HS90A_BOVIN	No assigned EC number	0.8	0.5376	0.0682	yes	N/A
Q04619	HS90B_CHICK	No assigned EC number	0.8863	0.4731	0.0606	yes	N/A
Q18688	HSP90_CAEEL	No assigned EC number	0.875	0.4301	0.0569	yes	N/A
Q58FF8	H90B2_HUMAN	No assigned EC number	0.9473	0.4086	0.0997	no	N/A
P82995	HS90A_RAT	No assigned EC number	0.8	0.5376	0.0682	yes	N/A
A5A6K9	HS90A_PANTR	No assigned EC number	0.8	0.5376	0.0682	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	93
PTZ00272	701	PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp	6e-18
COG0326	623	COG0326, HtpG, Molecular chaperone, HSP90 family [	8e-17
PRK05218	613	PRK05218, PRK05218, heat shock protein 90; Provisi	1e-16
PTZ00130	814	PTZ00130, PTZ00130, heat shock protein 90; Provisi	3e-11

>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional

 Score = 76.3 bits (187), Expect = 6e-18
 Identities = 35/37 (94%), Positives = 36/37 (97%)

Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETFAFQAEI QLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 3  ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASD 39

Length = 701

>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]

 Score = 73.5 bits (181), Expect = 8e-17
 Identities = 26/38 (68%), Positives = 32/38 (84%)

Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
           ET  FQAE+ QL+ L+I++ YSNKEIFLRELISN+SD
Sbjct: 4  QETRGFQAEVKQLLDLMIHSLYSNKEIFLRELISNASD 41

Length = 623

>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional

 Score = 72.8 bits (180), Expect = 1e-16
 Identities = 26/38 (68%), Positives = 33/38 (86%)

Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +ET  FQAE+ QL+ L+I++ YSNKEIFLRELISN+SD
Sbjct: 3  METGEFQAEVKQLLHLMIHSLYSNKEIFLRELISNASD 40

Length = 613

>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional

 Score = 57.4 bits (138), Expect = 3e-11
 Identities = 22/58 (37%), Positives = 38/58 (65%)

Query: 16  IERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
           +++   N   + D +    G+E   +Q E+ +LM +I+N+ Y+ KE+FLRELISN++D
Sbjct: 45  VKKDRDNIPEIEDGEKPTSGIEQHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAAD 102

Length = 814

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	93
COG0326	623	HtpG Molecular chaperone, HSP90 family [Posttransl	99.83
KOG0020|consensus	785		99.79
PTZ00130	814	heat shock protein 90; Provisional	99.79
KOG0019|consensus	656		99.77
PTZ00272	701	heat shock protein 83 kDa (Hsp83); Provisional	99.75
PRK05218	613	heat shock protein 90; Provisional	99.64
PRK14083	601	HSP90 family protein; Provisional	99.36
PF13589	137	HATPase_c_3: Histidine kinase-, DNA gyrase B-, and	94.14

>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=4e-21  Score=164.39  Aligned_cols=55  Identities=51%  Similarity=0.703  Sum_probs=52.0

Q ss_pred             chhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhhc
Q psy15111         36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWCR   90 (93)
Q Consensus        36 ~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~~   90 (93)
                      .+++.||+|++|||+||||||||||||||||||||||||| |+||.+.+++++.++
T Consensus         4 ~e~~~Fq~ev~~ll~lmihSlYSnKeIFLRELISNAsDAidKlr~~al~~~~~~~~   59 (623)
T COG0326           4 QETRGFQAEVKQLLDLMIHSLYSNKEIFLRELISNASDAIDKLRFEALSDPELGEG   59 (623)
T ss_pred             hhhhhhhHHHHHHHHHHHHhccCCcHHHHHHHHhhhHHHHHHHHHHhccCccccCC
Confidence            4789999999999999999999999999999999999999 999999999988753

>KOG0020|consensus

Probab=99.79  E-value=3.7e-20  Score=159.77  Aligned_cols=57  Identities=49%  Similarity=0.743  Sum_probs=53.3

Q ss_pred             CcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhhc
Q psy15111         34 DGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWCR   90 (93)
Q Consensus        34 ~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~~   90 (93)
                      ++++.|+||+|++++|.|||||||+||||||||||||||||| |+|++++++++.+.+
T Consensus        70 ~kaeKf~FQaEVnRmMklIINSLY~NKeIFLRELISNASDAlDKIRllaLtd~~~L~~  127 (785)
T KOG0020|consen   70 SKAEKFEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLALTDKDVLGE  127 (785)
T ss_pred             HHhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhhheeeeeccChhHhCc
Confidence            356899999999999999999999999999999999999999 999999999987754

>PTZ00130 heat shock protein 90; Provisional

Probab=99.79  E-value=4.2e-20  Score=161.45  Aligned_cols=68  Identities=35%  Similarity=0.655  Sum_probs=60.6

Q ss_pred             ccccccCCCCCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         22 NTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        22 ~~t~~~d~~~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      +-.-+.+++....+.++|+||+|+++||+||+|||||||+||||||||||+||| |+||++.+++.++.
T Consensus        51 ~~~~~~~~~~~~~~~e~~~FQaEv~~Lldiii~sLYS~keIFLRELISNAsDAldKlr~~~lt~~~~~~  119 (814)
T PTZ00130         51 NIPEIEDGEKPTSGIEQHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLG  119 (814)
T ss_pred             cCcccccCCCCCcccceeehHHHHHHHHHHHhhccCCCCCceeehHhhhHHHHHHHHHHHHcCCchhcC
Confidence            344456777777788999999999999999999999999999999999999999 99999999887654

>KOG0019|consensus

Probab=99.77  E-value=1.3e-19  Score=155.92  Aligned_cols=71  Identities=32%  Similarity=0.496  Sum_probs=61.1

Q ss_pred             hhhcccccccCCCCCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111         18 RVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW   88 (93)
Q Consensus        18 ~~~~~~t~~~d~~~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~   88 (93)
                      ++.++.+-.-+.++.++..|+|+||+|++|||++++|++||||||||||||||||||| |+||.+.+++...
T Consensus        16 ~~~~~~~~~~~~~~~~~~~et~~fqaE~~qLm~lii~s~YS~kEvFlRELISNaSDAldKiRy~~lt~~~~~   87 (656)
T KOG0019|consen   16 AMSLRAEPLFSTKMADEPQETHEFQAETNQLMDIVAKSLYSHKEVFLRELISNASDALEKLRYLELKGDEKA   87 (656)
T ss_pred             ccccccccccccccccccccceehhhhHHhHHHHHHHHhhcchHHHHHhhhccccchHHHHHHHhhcCcccc
Confidence            3444444455566777777999999999999999999999999999999999999999 9999999888664

>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional

Probab=99.75  E-value=3.4e-19  Score=152.98  Aligned_cols=53  Identities=68%  Similarity=0.901  Sum_probs=49.9

Q ss_pred             hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      ++|+||+|+++||+||+|||||||+||||||||||+||| |+||++.+++.+..
T Consensus         3 e~~~Fqae~~~Ll~lli~slYs~~~iflRELIsNA~DA~~k~r~~~l~~~~~~~   56 (701)
T PTZ00272          3 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLG   56 (701)
T ss_pred             ceEecHHHHHHHHHHHHhcccCCccHhHHHHHhhHHHHHHHHHHHhcCCchhcC
Confidence            689999999999999999999999999999999999999 99999998887653

>PRK05218 heat shock protein 90; Provisional

Probab=99.64  E-value=1.1e-16  Score=134.29  Aligned_cols=53  Identities=53%  Similarity=0.785  Sum_probs=49.1

Q ss_pred             chhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111         36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW   88 (93)
Q Consensus        36 ~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~   88 (93)
                      .|+++||+|+++||+||+++|||||+||||||||||+||| |+||.+.+++.+.
T Consensus         3 ~e~~~Fq~e~~~ll~ll~~~LYs~~~v~lRELiqNA~DA~~k~r~~~~~~~~~~   56 (613)
T PRK05218          3 METGEFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLRFEALTDPALY   56 (613)
T ss_pred             cceeehhHhHHHHHHHHhhhhcCCchHHHHHHHhCHHHHHHHHHHHhccCcccc
Confidence            4789999999999999999999999999999999999999 8999988776654

>PRK14083 HSP90 family protein; Provisional

Probab=99.36  E-value=3.5e-13  Score=114.04  Aligned_cols=43  Identities=23%  Similarity=0.485  Sum_probs=40.1

Q ss_pred             hhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhh
Q psy15111         38 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFT   80 (93)
Q Consensus        38 t~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~   80 (93)
                      .|+||+|+++||++++++||+||+||||||||||+||+ +.|+.
T Consensus         2 ~~~Fqae~~~ll~ll~~~LYs~~~iflrELiqNA~DA~~~~~~~   45 (601)
T PRK14083          2 SHRFQVDLRGVIDLLSRHLYSSPRVYVRELLQNAVDAITARRAL   45 (601)
T ss_pred             CccchHhHHHHHHHHHHhhcCCcHHHHHHHHHhHHHHHHhhhcc
Confidence            48999999999999999999999999999999999999 66664

>PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B

Probab=94.14  E-value=0.026  Score=38.53  Aligned_cols=18  Identities=61%  Similarity=0.656  Sum_probs=15.8

Q ss_pred             cCChhHHHHHHhhchhhhh
Q psy15111         57 YSNKEIFLRELISNSSDVQ   75 (93)
Q Consensus        57 YSnKEIFLRELISNASDAl   75 (93)
                      |++ +-.|+|||+||-||.
T Consensus         1 y~~-~~al~ElI~Ns~DA~   18 (137)
T PF13589_consen    1 YSP-EDALRELIDNSIDAG   18 (137)
T ss_dssp             -SC-THHHHHHHHHHHHHH
T ss_pred             CcH-HHHHHHHHHHHHHcc
Confidence            777 889999999999998

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	93
2fwy_A	256	Structure Of Human Hsp90-Alpha Bound To The Potent		3e-16
3ft5_A	249	Structure Of Hsp90 Bound With A Novel Fragment Leng		3e-16
2xjg_A	249	Structure Of Hsp90 With Small Molecule Inhibitor Bo		3e-16
2xjj_A	249	Structre Of Hsp90 With Small Molecule Inhibitor Bou		3e-16
2xdu_A	236	Structre Of Hsp90 With Small Molecule Inhibitor Bou		5e-16
1uyi_A	236	Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F		5e-16
2jjc_A	218	Hsp90 Alpha Atpase Domain With Bound Small Molecule		6e-16
2yee_A	252	Hsp90 Inhibitors And Drugs From Fragment And Virtua		6e-16
2ye7_A	252	Hsp90 Inhibitors And Drugs From Fragment And Virtua		6e-16
1yc1_A	264	Crystal Structures Of Human Hsp90alpha Complexed Wi		7e-16
3qdd_A	237	Hsp90a N-Terminal Domain In Complex With Biib021 Le		7e-16
1uy6_A	236	Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-		7e-16
2ccs_A	236	Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py		7e-16
3bm9_A	226	Discovery Of Benzisoxazoles As Potent Inhibitors Of		7e-16
2ye2_A	252	Hsp90 Inhibitors And Drugs From Fragment And Virtua		7e-16
4awo_A	230	Complex Of Hsp90 Atpase Domain With Tropane Derived		7e-16
2bsm_A	235	Novel, Potent Small Molecule Inhibitors Of The Mole		7e-16
2yi0_A	229	Structural Characterization Of 5-Aryl-4-(5-Substitu		7e-16
1byq_A	228	Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22		7e-16
3d0b_A	232	Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz		7e-16
4egh_A	232	Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox		8e-16
4eeh_A	229	Hsp90 Alpha N-Terminal Domain In Complex With An In		8e-16
3b24_A	229	Hsp90 Alpha N-Terminal Domain In Complex With An Am		8e-16
3r4m_A	228	Optimization Of Potent, Selective, And Orally Bioav		8e-16
3inw_A	228	Hsp90 N-Terminal Domain With Pochoxime A Length = 2		8e-16
3hhu_A	224	Human Heat-Shock Protein 90 (Hsp90) In Complex With		8e-16
3tuh_A	209	Crystal Structure Of The N-Terminal Domain Of An Hs		8e-16
3k98_A	232	Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C		8e-16
3k97_A	251	Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-		8e-16
3eko_A	226	Dihydroxylphenyl Amides As Inhibitors Of The Hsp90		8e-16
2qfo_A	207	Hsp90 Complexed With A143571 And A516383 Length = 2		8e-16
2qf6_A	207	Hsp90 Complexed With A56322 Length = 207		9e-16
2k5b_A	210	Human Cdc37-Hsp90 Docking Model Based On Nmr Length		9e-16
1osf_A	215	Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D		9e-16
2yjw_A	209	Tricyclic Series Of Hsp90 Inhibitors Length = 209		2e-15
4gqt_A	227	N-Terminal Domain Of C. Elegans Hsp90 Length = 227		1e-14
1uym_A	220	Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho		2e-14
3nmq_A	239	Hsp90b N-Terminal Domain In Complex With Ec44, A Py		2e-14
3o6o_A	214	Crystal Structure Of The N-Terminal Domain Of An Hs		2e-14
3opd_A	231	Crystal Structure Of The N-Terminal Domain Of An Hs		2e-14
3h80_A	231	Crystal Structure Of The Amino-Terminal Domain Of H		4e-14
2xcm_A	214	Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord		4e-14
2jki_A	223	Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng		6e-14
1zw9_A	240	Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit		7e-13
3c0e_A	240	Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9		7e-13
1bgq_A	225	Radicicol Bound To The Atp Binding Site Of The N-Te		7e-13
2cgf_A	225	A Radicicol Analogue Bound To The Atp Binding Site		7e-13
1a4h_A	230	Structure Of The N-Terminal Domain Of The Yeast Hsp		8e-13
2yga_A	220	E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel		8e-13
2ygf_A	220	L89v, L93i And V136m Mutant Of N-term Hsp90 Complex		8e-13
1ah8_A	220	Structure Of The Orthorhombic Form Of The N-Termina		8e-13
3k60_A	223	Crystal Structure Of N-Terminal Domain Of Plasmodiu		8e-13
2bre_A	219	Structure Of A Hsp90 Inhibitor Bound To The N-Termi		9e-13
2yge_A	220	E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel		9e-13
2xx2_A	214	Macrolactone Inhibitor Bound To Hsp90 N-Term Length		9e-13
1am1_A	213	Atp Binding Site In The Hsp90 Molecular Chaperone L		9e-13
1us7_A	214	Complex Of Hsp90 And P50 Length = 214		9e-13
2wep_A	220	Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp		2e-12
2cg9_A	677	Crystal Structure Of An Hsp90-Sba1 Closed Chaperone		3e-12
2esa_A	236	Grp94 N-Terminal Domain Bound To Geldanamycin: Effe		1e-10
1u2o_A	236	Crystal Structure Of The N-Domain Of Grp94 Lacking		1e-10
1qy5_A	269	Crystal Structure Of The N-Domain Of The Er Hsp90 C		2e-10
1u0y_A	273	N-Domain Of Grp94, With The Charged Domain, In Comp		2e-10
2ior_A	235	Crystal Structure Of The N-Terminal Domain Of Htpg,		4e-10
2o1u_A	666	Structure Of Full Length Grp94 With Amp-Pnp Bound L		4e-10
2o1w_A	506	Structure Of N-Terminal Plus Middle Domains (N+m) O		5e-10
2iop_A	624	Crystal Structure Of Full-Length Htpg, The Escheric		5e-09
1y4s_A	559	Conformation Rearrangement Of Heat Shock Protein 90		5e-09
3ied_A	272	Crystal Structure Of N-Terminal Domain Of Plasmodiu		2e-08
3peh_A	281	Crystal Structure Of The N-Terminal Domain Of An Hs		7e-08

>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 14 GLIERVT--KNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS 71
          GL+ R +     T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS
Sbjct: 13 GLVPRGSHMPEETQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS 72
Query: 72 SDV 74
          SD 
Sbjct: 73 SDA 75

>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 14 GLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          GL+ R +     M + +     VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 GLVPRGSHMDQPMEEEE-----VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 67

>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 14 GLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          GL+ R +     M + +     VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 GLVPRGSHMDQPMEEEE-----VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 67

>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 14 GLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          GL+ R +     M + +     VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 GLVPRGSHMDQPMEEEE-----VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 67

>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 41/45 (91%)
Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +Q   + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 22 DQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 66

>pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 40/47 (85%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 
Sbjct: 9  DQPMEEEHVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 55

>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 41/45 (91%)
Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +Q   + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 5  DQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 49

>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 40/47 (85%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 
Sbjct: 25 DQPMEEEHVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 71

>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 25 DQPMEEEHVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 70

>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/39 (97%), Positives = 38/39 (97%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 
Sbjct: 45 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 83

>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/39 (97%), Positives = 38/39 (97%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 
Sbjct: 18 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 56

>pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/39 (97%), Positives = 38/39 (97%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 
Sbjct: 17 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 55

>pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 17 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/44 (88%), Positives = 40/44 (90%)
Query: 30 QSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          Q   + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1  QPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 44

>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 33 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 70

>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 27 ADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 2  SDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 48

>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/39 (97%), Positives = 38/39 (97%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 
Sbjct: 16 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 54

>pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46

>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 17 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 50

>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 10 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 47

>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 10 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 47

>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46

>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46

>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54

>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 2  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 39

>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 2  DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 47

>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 32 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 69

>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 2  DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 47

>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 38

>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 38

>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 4  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 41

>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46

>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/38 (97%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 3  METFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 40

>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 34 DGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +  ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SD
Sbjct: 6  ENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASD 45

>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 38 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          TFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 13 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASD 48

>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 38 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          TFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 18 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASD 53

>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/37 (97%), Positives = 36/37 (97%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETFAFQAEI QLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 4  ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSD 40

>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/37 (97%), Positives = 36/37 (97%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETFAFQAEI QLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 21 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSD 57

>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/38 (92%), Positives = 36/38 (94%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
          ETFAFQAEI QLMSLIINTFYSNKEIFLRELISN+SD 
Sbjct: 21 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDA 58

>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          + ++    ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSD
Sbjct: 1  HHAAATETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD 45

>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/37 (94%), Positives = 36/37 (97%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSD
Sbjct: 12 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD 48

>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 24 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 60

>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 24 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 60

>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/41 (82%), Positives = 35/41 (85%)
Query: 33 GDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          G   ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 11 GMASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 51

>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/41 (82%), Positives = 35/41 (85%)
Query: 33 GDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          G   ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 11 GMASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 51

>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 14 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 50

>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 35/37 (94%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETFAF A+I QLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 4  ETFAFNADIRQLMSLIINTFYSNKEIFLRELISNASD 40

>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 3  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 39

>pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRE++SN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLREIVSNASD 40

>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 10 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 46

>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 10 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 46

>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 6  EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 42

>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 10 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 46

>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQN-IDFTGNQTQDLW 88
          G ET  FQ+E+ QL+ L+I++ YSNKEIFLRELISN+SD  + + F      DL+
Sbjct: 23 GQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLY 77

>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 23 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 59

>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 23 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 59

>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQN-IDFTGNQTQDLW 88
          G ET  FQ+E+ QL+ L+I++ YSNKEIFLRELISN+SD  + + F      DL+
Sbjct: 3  GQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLY 57

>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQN-IDFTGNQTQDLW 88
          G ET  FQ+E+ QL+ L+I++ YSNKEIFLRELISN+SD  + + F      DL+
Sbjct: 3  GQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLY 57

>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 34/41 (82%)
Query: 33 GDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          G  VE + F+AE+ ++M +I+N+ Y++K++FLRELISN+SD
Sbjct: 21 GSPVEKYNFKAEVNKVMDIIVNSLYTDKDVFLRELISNASD 61

>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 30 QSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD-VQNIDF 79
          Q   + +E+  +Q E+ +LM +I+N+ Y+ KE+FLRELISN++D ++ I F
Sbjct: 17 QGPTESMESHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRF 67

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	93
1yc1_A	264	HSP 86, heat shock protein HSP 90-alpha; cell-cycl	6e-27
3nmq_A	239	Heat shock protein HSP 90-beta; ATPase, chaperone-	1e-26
3t0h_A	228	Heat shock protein HSP 90-alpha; chaperone, ATPase	4e-26
3o0i_A	256	HSP90AA1 protein; HSP90 heat-shock proteins, chape	8e-26
3peh_A	281	Endoplasmin homolog; structural genomics, structur	1e-25
1qy5_A	269	Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N	1e-25
2wer_A	220	ATP-dependent molecular chaperone HSP82; ATPase, A	1e-25
2gqp_A	236	Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone,	2e-25
2cg9_A	677	ATP-dependent molecular chaperone HSP82; chaperone	6e-25
2o1u_A	666	Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone,	8e-25
2ior_A	235	Chaperone protein HTPG; heat shock protein, HSP90;	2e-24
2ioq_A	624	Chaperone protein HTPG; heat shock protein, HSP90;	2e-22
1y4s_A	559	Chaperone protein HTPG; HSP90, molecular chaperone	3e-22
3ied_A	272	Heat shock protein; HSP90, chaperone, structural g	3e-15

>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264

 Score = 98.1 bits (245), Expect = 6e-27
 Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 1/70 (1%)

Query: 4  NQSSGDAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIF 63
          + + G  +   L +   K+    +D     + VETFAFQAEIAQLMSLIINTFYSNKEIF
Sbjct: 14 SMTGGQQMGRDLYDDDDKDRWG-SDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIF 72

Query: 64 LRELISNSSD 73
          LRELISNSSD
Sbjct: 73 LRELISNSSD 82

>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239

 Score = 96.9 bits (242), Expect = 1e-26
 Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 1/53 (1%)

Query: 22 NTTLMADNQSSGD-GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          + TLM +    G+  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 1  DPTLMPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASD 53

>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228

 Score = 95.3 bits (238), Expect = 4e-26
 Identities = 39/46 (84%), Positives = 40/46 (86%)

Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1  DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46

>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256

 Score = 95.0 bits (237), Expect = 8e-26
 Identities = 40/57 (70%), Positives = 41/57 (71%)

Query: 17 ERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
                 T   D     + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 18 GSHMPEETQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 74

>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281

 Score = 95.0 bits (237), Expect = 1e-25
 Identities = 20/44 (45%), Positives = 33/44 (75%)

Query: 30 QSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          Q   + +E+  +Q E+ +LM +I+N+ Y+ KE+FLRELISN++D
Sbjct: 17 QGPTESMESHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAAD 60

>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269

 Score = 95.0 bits (237), Expect = 1e-25
 Identities = 27/38 (71%), Positives = 32/38 (84%)

Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
           E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 5  SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 42

>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220

 Score = 93.3 bits (233), Expect = 1e-25
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRE++SN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLREIVSNASD 40

>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236

 Score = 93.8 bits (234), Expect = 2e-25
 Identities = 27/45 (60%), Positives = 34/45 (75%)

Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          +    +  E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 2  SHMLREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 46

>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677

 Score = 96.0 bits (239), Expect = 6e-25
 Identities = 33/37 (89%), Positives = 34/37 (91%)

Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40

>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666

 Score = 95.4 bits (238), Expect = 8e-25
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 13 LGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSS 72
          +G       +++ +    S     E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+S
Sbjct: 1  MGSSHHHHHHSSGLVPRGSHM--SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNAS 58

Query: 73 D 73
          D
Sbjct: 59 D 59

>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235

 Score = 91.1 bits (227), Expect = 2e-24
 Identities = 28/61 (45%), Positives = 40/61 (65%)

Query: 13 LGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSS 72
          +G       +++ +    S   G ET  FQ+E+ QL+ L+I++ YSNKEIFLRELISN+S
Sbjct: 1  MGSSHHHHHHSSGLVPRGSHMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNAS 60

Query: 73 D 73
          D
Sbjct: 61 D 61

>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624

 Score = 88.4 bits (220), Expect = 2e-22
 Identities = 25/37 (67%), Positives = 32/37 (86%)

Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ET  FQ+E+ QL+ L+I++ YSNKEIFLRELISN+SD
Sbjct: 5  ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASD 41

>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559

 Score = 88.0 bits (219), Expect = 3e-22
 Identities = 25/37 (67%), Positives = 32/37 (86%)

Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ET  FQ+E+ QL+ L+I++ YSNKEIFLRELISN+SD
Sbjct: 5  ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASD 41

>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272

 Score = 67.6 bits (165), Expect = 3e-15
 Identities = 22/61 (36%), Positives = 40/61 (65%)

Query: 13 LGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSS 72
          +G       +++   +    G  VE + F+AE+ ++M +I+N+ Y++K++FLRELISN+S
Sbjct: 1  MGSSHHHHHHSSGRENLYFQGSPVEKYNFKAEVNKVMDIIVNSLYTDKDVFLRELISNAS 60

Query: 73 D 73
          D
Sbjct: 61 D 61

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	93
3ied_A	272	Heat shock protein; HSP90, chaperone, structural g	99.84
3nmq_A	239	Heat shock protein HSP 90-beta; ATPase, chaperone-	99.81
3peh_A	281	Endoplasmin homolog; structural genomics, structur	99.79
3o0i_A	256	HSP90AA1 protein; HSP90 heat-shock proteins, chape	99.78
3t0h_A	228	Heat shock protein HSP 90-alpha; chaperone, ATPase	99.77
1qy5_A	269	Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N	99.73
2cg9_A	677	ATP-dependent molecular chaperone HSP82; chaperone	99.66
2gqp_A	236	Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone,	99.63
2o1u_A	666	Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone,	99.62
1y4s_A	559	Chaperone protein HTPG; HSP90, molecular chaperone	99.6
1yc1_A	264	HSP 86, heat shock protein HSP 90-alpha; cell-cycl	99.6
2wer_A	220	ATP-dependent molecular chaperone HSP82; ATPase, A	99.59
2ioq_A	624	Chaperone protein HTPG; heat shock protein, HSP90;	99.59
2ior_A	235	Chaperone protein HTPG; heat shock protein, HSP90;	99.4
1h7s_A	365	PMS1 protein homolog 2; DNA repair, GHL ATPase, mi	81.9
1b63_A	333	MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A	81.15

>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum}

Probab=99.84  E-value=1.5e-22  Score=158.52  Aligned_cols=55  Identities=40%  Similarity=0.700  Sum_probs=50.2

Q ss_pred             CCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111         33 GDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW   88 (93)
Q Consensus        33 ~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~   88 (93)
                      ..+.|+|+||+|++|||+||+|+|||||||||||||||||||| |+| ++++++.++
T Consensus        21 ~~~~e~~~Fqae~~~ll~li~~slYs~keiFlRELISNasDA~dK~r-~~l~~~~~~   76 (272)
T 3ied_A           21 GSPVEKYNFKAEVNKVMDIIVNSLYTDKDVFLRELISNASDACDKKR-IILENNKLI   76 (272)
T ss_dssp             TEECEEEECCHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             ccccceechHHHHHHHHHHHHhhcCCCHHHHHHHHHHhhHHHHHHHH-HhccChhhh
Confidence            3456899999999999999999999999999999999999999 999 888877665

>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1

Probab=99.81  E-value=3.9e-21  Score=145.83  Aligned_cols=61  Identities=62%  Similarity=0.794  Sum_probs=52.9

Q ss_pred             CCCCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        29 ~~~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      ++..+++.++|+||+|+++||++|+|+|||||+||||||||||+||+ |+||.+++++.+++
T Consensus         9 ~~~~~~~~e~~~Fqae~~~ll~ll~~~lYs~~~ifLRELIsNA~DA~~k~r~~~l~~~~~~~   70 (239)
T 3nmq_A            9 VHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLD   70 (239)
T ss_dssp             ---CTTCCEEEECCHHHHHHHHHHHHSCCCCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGT
T ss_pred             cccccccceeEeehhhHHHHHHHHHHhccCCcHHHHHHHHhChHHHHHHHHHHhccCchhcc
Confidence            34444457899999999999999999999999999999999999999 99999888877654

>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*

Probab=99.79  E-value=5.1e-20  Score=142.98  Aligned_cols=56  Identities=38%  Similarity=0.717  Sum_probs=52.0

Q ss_pred             CcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         34 DGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        34 ~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      +..++|+||+|+++||++|+|+|||||+||||||||||+||+ |+||++++++.+++
T Consensus        21 ~~~e~~~Fqaei~~Ll~ll~~~lYsn~~ifLRELIsNA~DA~~k~r~~~l~d~~~~~   77 (281)
T 3peh_A           21 ESMESHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLG   77 (281)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTTCGGGGT
T ss_pred             hccceeeehHHHHHHHHHHHHhccCChHHHHHHHHhChHHHHHHHHHHhcCCchhcc
Confidence            455899999999999999999999999999999999999999 99999999887654

>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A*

Probab=99.78  E-value=2.7e-20  Score=142.38  Aligned_cols=59  Identities=66%  Similarity=0.825  Sum_probs=51.7

Q ss_pred             CCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         31 SSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        31 ~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      +..++.++++||+|+++||++|+|+|||||+||||||||||+||+ |+||.+++++.+++
T Consensus        32 ~~~~~~e~~~Fqaei~~Ll~ll~~~lYs~~~iflRELIsNA~DA~~k~r~~~l~~~~~~~   91 (256)
T 3o0i_A           32 MEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD   91 (256)
T ss_dssp             ----CCEEEECCHHHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGT
T ss_pred             cccccceeEEeEeeHHHHHHHHHHhccCCcHHHHHHHHhChHHHHHHHHHHhccCchhcc
Confidence            344567999999999999999999999999999999999999999 99999888887764

>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ...

Probab=99.77  E-value=6.7e-20  Score=136.70  Aligned_cols=62  Identities=65%  Similarity=0.813  Sum_probs=51.8

Q ss_pred             CCCCCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        28 d~~~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      |.++.++..++|.||+|+++||++++|+||+||++|||||||||+||+ |+||.+.+++.+++
T Consensus         1 ~~~~~~~~~~~~~Fq~ei~~ll~ll~~~lYs~~~~~lrELi~NA~DA~~k~r~~~~~~~~~~~   63 (228)
T 3t0h_A            1 DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD   63 (228)
T ss_dssp             -------CCEEEECCHHHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHTTCGGGGT
T ss_pred             CcccccccccceEEEeeHHHHHHHHHHhhcCCcHHHHHHHHHCHHHHHHHHHhhhccCccccc
Confidence            345666777999999999999999999999999999999999999999 99999888887764

>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*

Probab=99.73  E-value=7.9e-19  Score=133.78  Aligned_cols=54  Identities=52%  Similarity=0.772  Sum_probs=50.1

Q ss_pred             cchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111         35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW   88 (93)
Q Consensus        35 ~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~   88 (93)
                      ..++|.||+++++||++|+|+|||||+||||||||||+||+ |+||++++++.++
T Consensus         4 ~~e~~~Fqaei~~Ll~li~~~lYsn~eifLrELIsNA~DA~~k~r~~~l~~~~~~   58 (269)
T 1qy5_A            4 KSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL   58 (269)
T ss_dssp             CEEEECCCHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTT
T ss_pred             cccceeehhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhhhhccCchhc
Confidence            45899999999999999999999999999999999999999 9999988877654

>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}

Probab=99.66  E-value=1.1e-17  Score=141.81  Aligned_cols=53  Identities=64%  Similarity=0.828  Sum_probs=50.1

Q ss_pred             hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      ++|+||+|+++||+||+|+|||||+||||||||||+||+ |+||++++++.+..
T Consensus         4 e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~   57 (677)
T 2cg9_A            4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLE   57 (677)
T ss_dssp             EEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTT
T ss_pred             cceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhcc
Confidence            789999999999999999999999999999999999999 99999999887643

>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A*

Probab=99.63  E-value=5.8e-17  Score=119.92  Aligned_cols=53  Identities=53%  Similarity=0.794  Sum_probs=48.6

Q ss_pred             chhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111         36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW   88 (93)
Q Consensus        36 ~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~   88 (93)
                      .++++||+++++|+++++|+||++|++|||||||||.||+ |+||++..++.++
T Consensus         9 ~~~~~F~~ei~~L~~ll~~~lys~~~~~lrELI~NA~DA~ak~~~~~~~~~~~~   62 (236)
T 2gqp_A            9 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL   62 (236)
T ss_dssp             TTEECCCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTT
T ss_pred             ccccchhHhHHHHHHHHHHhhcCCchHHHHHHHHhHHHhhhhhhhhcccCcccc
Confidence            4789999999999999999999999999999999999999 8999987766543

>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A

Probab=99.62  E-value=2.2e-17  Score=139.65  Aligned_cols=55  Identities=51%  Similarity=0.747  Sum_probs=39.4

Q ss_pred             cchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        35 ~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      +.|+|+||+|+++||++|+|+|||||+||||||||||+||+ |+||++.+++.+.+
T Consensus        21 ~~e~~~Fqaei~~Ll~li~~sLYsn~eifLRELIsNA~DA~dk~r~~~l~~~~~~~   76 (666)
T 2o1u_A           21 MSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALA   76 (666)
T ss_dssp             -------------CCSSSTTTTSSSCTTHHHHHHHHHHHHHHHHHHHTTSCTTSSS
T ss_pred             cccceehHHhHHHHHHHHHHhccCCchHHHHHHHhhHHHHHHHHHHHhccCchhcc
Confidence            44899999999999999999999999999999999999999 99999998877653

>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A

Probab=99.60  E-value=1.1e-16  Score=132.62  Aligned_cols=54  Identities=52%  Similarity=0.785  Sum_probs=50.2

Q ss_pred             chhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        36 ~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      .++|+||+|+++||++|+|+|||||++|||||||||+||+ |+||.+++++.+..
T Consensus         4 ~e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~   58 (559)
T 1y4s_A            4 QETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYE   58 (559)
T ss_dssp             CEEEECCTTHHHHHHHHHHHTGGGTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGC
T ss_pred             ccceeeeecHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhHhHHHhhccCchhcc
Confidence            3789999999999999999999999999999999999999 99999988877653

>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*

Probab=99.60  E-value=2.4e-16  Score=119.41  Aligned_cols=80  Identities=53%  Similarity=0.645  Sum_probs=51.4

Q ss_pred             chhhhhhhhhhhcccccccCCCCCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccch
Q psy15111          9 DAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDL   87 (93)
Q Consensus         9 ~~~~~~~~~~~~~~~t~~~d~~~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~   87 (93)
                      ...+--++++..+. .+..++++...+.+++.||+++++|+++++|++|++|++||||||+||.||+ |+||.+..++.+
T Consensus        19 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~~F~~ei~~Ll~ll~~~lys~~~~~lrELI~NA~DA~ak~r~~~l~~~~~   97 (264)
T 1yc1_A           19 QQMGRDLYDDDDKD-RWGSDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSK   97 (264)
T ss_dssp             -------------------------CCEEEEECCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred             hhhhhHHHHHHHHH-hhcCCCccccccceeEEehHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhhccCccc
Confidence            33444556655442 3455555555667999999999999999999999999999999999999999 899998777666


Q ss_pred             hh
Q psy15111         88 WC   89 (93)
Q Consensus        88 ~~   89 (93)
                      ++
T Consensus        98 ~~   99 (264)
T 1yc1_A           98 LD   99 (264)
T ss_dssp             GG
T ss_pred             cC
Confidence            54

>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A

Probab=99.59  E-value=5e-16  Score=112.41  Aligned_cols=53  Identities=60%  Similarity=0.815  Sum_probs=49.3

Q ss_pred             hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      |+++||+++++|+++++|+||+|+++||||||+||.||. +.||.+..++.+++
T Consensus         4 ~~~~f~~~~~~l~~ll~~~lys~~~~~lrELI~NA~DA~a~~~~~~~~~~~~~~   57 (220)
T 2wer_A            4 ETFEFQAEITQLMSLIINTVYSNKEIFLREIVSNASDALDKIRYKSLSDPKQLE   57 (220)
T ss_dssp             EEEECCHHHHHHHHHHHHHCCSSTTHHHHHHHHHHHHHHHHHHHHHTTCGGGGG
T ss_pred             cceeeeecHHHHHHHHHHhccCCchHHHHHHHHhHHHHHHHHHhhcccCchhcc
Confidence            789999999999999999999999999999999999999 89998888776654

>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A

Probab=99.59  E-value=2.4e-16  Score=132.00  Aligned_cols=53  Identities=53%  Similarity=0.809  Sum_probs=40.4

Q ss_pred             hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      |+|+||+|+++||++|+|+|||||++|||||||||+||+ |+||.+.+++.+.+
T Consensus         5 e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~   58 (624)
T 2ioq_A            5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYE   58 (624)
T ss_dssp             ----------CCHHHHHHHHSSCTTHHHHHHHHHHHHHHHHHHHHHHTSTTTTT
T ss_pred             cceeeeecHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhhhhHHhhccCccccc
Confidence            789999999999999999999999999999999999999 99999988877654

>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli}

Probab=99.40  E-value=8.4e-14  Score=102.49  Aligned_cols=52  Identities=54%  Similarity=0.825  Sum_probs=47.3

Q ss_pred             cchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccc
Q psy15111         35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQD   86 (93)
Q Consensus        35 ~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~   86 (93)
                      +.|++.||+++++|++++++.+|+++++||||||+||.||. ++||....++.
T Consensus        23 ~~e~~~f~~~i~~L~~~l~~~lys~~~~~lrELI~NA~DA~~~~r~~~~~~~~   75 (235)
T 2ior_A           23 GQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD   75 (235)
T ss_dssp             EEEEEECCHHHHHHHHHHHHHTGGGTTHHHHHHHHHHHHHHHHHHHHHTSCGG
T ss_pred             ccccEEeehhHHHHHHHHHHhhcCCHHHHHHHHHhCHHHHHHHHHhhhccCcc
Confidence            44889999999999999999999999999999999999999 89998666544

>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*

Probab=81.90  E-value=0.44  Score=37.03  Aligned_cols=32  Identities=22%  Similarity=0.297  Sum_probs=15.1

Q ss_pred             HHHHHHHHHHHhhcCCh-----hHHHHHHhhchhhhh
Q psy15111         44 EIAQLMSLIINTFYSNK-----EIFLRELISNSSDVQ   75 (93)
Q Consensus        44 ei~~LL~liinSLYSnK-----EIFLRELISNASDAl   75 (93)
                      .|++|-+.++|.+++..     .-+++|||+||.||-
T Consensus        14 ~I~~L~~~~~~~i~agevi~~~~~vl~eLv~NAiDA~   50 (365)
T 1h7s_A           14 AIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAG   50 (365)
T ss_dssp             ---------------CEEECCHHHHHHHHHHHHHHTT
T ss_pred             hhccCCHHHHHHhcCCCchhhHHHHHHHHHHHHHHCC
Confidence            47788888888888754     889999999999986

>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A*

Probab=81.15  E-value=0.81  Score=34.68  Aligned_cols=22  Identities=23%  Similarity=0.314  Sum_probs=19.0

Q ss_pred             HhhcCChhHHHHHHhhchhhhh
Q psy15111         54 NTFYSNKEIFLRELISNSSDVQ   75 (93)
Q Consensus        54 nSLYSnKEIFLRELISNASDAl   75 (93)
                      ..+..+...+++|||+||.||.
T Consensus        19 gevi~~~~~~v~ELi~NaidA~   40 (333)
T 1b63_A           19 GEVVERPASVVKELVENSLDAG   40 (333)
T ss_dssp             HHHCSSHHHHHHHHHHHHHHTT
T ss_pred             CCchhCHHHHHHHHHHHHHHCC
Confidence            3455789999999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	93
d2gqpa1	227	d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris)	2e-20
d1uyla_	208	d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId:	5e-20
d2iwxa1	213	d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo	6e-20

>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Dog (Canis familiaris) [TaxId: 9615]

 Score = 79.7 bits (196), Expect = 2e-20
 Identities = 27/37 (72%), Positives = 32/37 (86%)

Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 1  EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 37

>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 5e-20
 Identities = 38/38 (100%), Positives = 38/38 (100%)

Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1  VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 38

>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.8 bits (191), Expect = 6e-20
 Identities = 33/37 (89%), Positives = 34/37 (91%)

Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
          ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 3  ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 39

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	93
d2gqpa1	227	HSP90 {Dog (Canis familiaris) [TaxId: 9615]}	99.84
d1uyla_	208	HSP90 {Human (Homo sapiens) [TaxId: 9606]}	99.84
d2iwxa1	213	HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T	99.82
d2hkja3	219	Topoisomerase VI-B subunit {Archaeon Sulfolobus sh	92.8

>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]}

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.84  E-value=1.2e-22  Score=150.44  Aligned_cols=53  Identities=53%  Similarity=0.803  Sum_probs=48.5

Q ss_pred             hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      |+|+||+|+++||+|++|||||||+||||||||||+||| |+||++..++.+..
T Consensus         1 e~~~Fq~e~~~ll~ll~~sLYs~~~iflRELiqNA~DA~~k~r~~~~~~~~~~~   54 (227)
T d2gqpa1           1 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALA   54 (227)
T ss_dssp             TEECCCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred             CceeeehhHHHHHHHHHhcccCCCchhHHHHHhhHHHHHHHHHHHhccCccccc
Confidence            579999999999999999999999999999999999999 89999877766543

>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.8e-22  Score=146.81  Aligned_cols=53  Identities=72%  Similarity=0.898  Sum_probs=48.8

Q ss_pred             hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111         37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC   89 (93)
Q Consensus        37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~   89 (93)
                      |+|+||+|+++||+|++|+|||||+||||||||||+||| |+|++..+.+++.+
T Consensus         2 e~~~Fq~e~~~ll~ll~~slYs~~~iflRELIqNa~DA~~k~~~~~~~~~~~~~   55 (208)
T d1uyla_           2 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD   55 (208)
T ss_dssp             EEEECCHHHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGT
T ss_pred             cceeehHHHHHHHHHHHHhhcCCchHhHHHHHhhHHHHHHHHHHHhcCCchhcc
Confidence            789999999999999999999999999999999999999 89998877766544

>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=1.8e-21  Score=142.66  Aligned_cols=53  Identities=64%  Similarity=0.841  Sum_probs=48.7

Q ss_pred             chhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111         36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW   88 (93)
Q Consensus        36 ~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~   88 (93)
                      .|+|+||+|+++||+||+|+|||||+||||||||||+||| |+||++.+++..-
T Consensus         2 ~e~~~Fqae~~~ll~ll~~~lYs~~~iflRELiqNa~DA~~~~~~~~~~~~~~~   55 (213)
T d2iwxa1           2 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQL   55 (213)
T ss_dssp             CEEEECCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHTTTCGGGG
T ss_pred             CccEeehhhHHHHHHHHHHhhcCCchHHHHHHHHhHHHHHHHHHHhhccCcccc
Confidence            4799999999999999999999999999999999999999 8999887776543

>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]}

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: DNA gyrase/MutL, N-terminal domain
domain: Topoisomerase VI-B subunit
species: Archaeon Sulfolobus shibatae [TaxId: 2286]

Probab=92.80  E-value=0.014  Score=39.71  Aligned_cols=12  Identities=58%  Similarity=0.750  Sum_probs=11.5

Q ss_pred             HHHHhhchhhhh
Q psy15111         64 LRELISNSSDVQ   75 (93)
Q Consensus        64 LRELISNASDAl   75 (93)
                      |||||+||-||.
T Consensus        27 l~eLi~Naida~   38 (219)
T d2hkja3          27 VRELIENSLDAT   38 (219)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHH
Confidence            899999999997