Psyllid ID: psy15116

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVIF
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccHHHccHHHHHHHHHHHHHHcccccccHHHHcccHHHHccccHHHHHHHcccccHHHHHHHHHHHHcccEEEc
Coil and Loop (DISEMBL)
mytlddprqwsesNVAQWLCWAIREFSLEGVTLHqfymrgkdicsmgkesflarappfmGDILWEHLEILQKEYLVIF
Flexible Loop (DISEMBL)
mytlddprqwseSNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVIF
Low Complexity Region (SEG)
MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVIF
Disordered region (IsUnstruct)
************SNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVI*
Disordered Region (DISOPRED)
MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVIF
Disordered Region (DISEMBL)
**********SESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVIF
Disordered Region (DISPRO)
*YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVIF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVIF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
P41156	441	Protein C-ets-1 OS=Rattus	yes	N/A	0.871	0.154	0.617	3e-20
P27577	440	Protein C-ets-1 OS=Mus mu	yes	N/A	0.871	0.154	0.617	3e-20
P14921	441	Protein C-ets-1 OS=Homo s	yes	N/A	0.871	0.154	0.602	6e-20
P01105	669	p135Gag-Myb-Ets-transform	N/A	N/A	0.871	0.101	0.602	1e-19
P15062	485	Transforming protein p68/	yes	N/A	0.871	0.140	0.602	1e-19
P13474	441	Transforming protein p54/	yes	N/A	0.871	0.154	0.588	5e-19
Q91712	472	Protein c-ets-2-B OS=Xeno	N/A	N/A	0.884	0.146	0.608	7e-19
P18755	438	Protein c-ets-1-A OS=Xeno	N/A	N/A	0.871	0.155	0.558	1e-18
P51023	718	ETS-like protein pointed,	yes	N/A	0.871	0.094	0.579	2e-18
P19102	472	Protein c-ets-2-A OS=Xeno	N/A	N/A	0.910	0.150	0.577	5e-18

>sp|P41156|ETS1_RAT Protein C-ets-1 OS=Rattus norvegicus GN=Ets1 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 68  DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWE 127

Query: 66  HLEILQKE 73
           HLEILQKE
Sbjct: 128 HLEILQKE 135

Transcription factor.
Rattus norvegicus (taxid: 10116)

>sp|P27577|ETS1_MOUSE Protein C-ets-1 OS=Mus musculus GN=Ets1 PE=1 SV=2

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 68  DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWE 127

Query: 66  HLEILQKE 73
           HLEILQKE
Sbjct: 128 HLEILQKE 135

Transcription factor.

Mus musculus (taxid: 10090)

>sp|P14921|ETS1_HUMAN Protein C-ets-1 OS=Homo sapiens GN=ETS1 PE=1 SV=1

 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GK+ FL  AP F+GDILWE
Sbjct: 68  DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWE 127

Query: 66  HLEILQKE 73
           HLEILQKE
Sbjct: 128 HLEILQKE 135

Transcription factor.

Homo sapiens (taxid: 9606)

>sp|P01105|MYBE_AVILE p135Gag-Myb-Ets-transforming protein (Fragment) OS=Avian leukemia virus E26 GN=GAG PE=4 SV=1

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DP+QW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 293 DPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWE 352

Query: 66  HLEILQKE 73
           HLEILQKE
Sbjct: 353 HLEILQKE 360

DNA-binding protein that specifically recognizes the sequence 5'-YAAC[GT]G-3'. The Myb-Ets protein induces predominantly erythroblastosis in chicken and transforms avian erythroblasts and immature myelomonocytic cells in culture. It appears that the Ets domain is responsible for the effects on erythroid cells and that the Myb domain encodes the myeloid-transforming capacity.

Galliformes (taxid: 8976)

>sp|P15062|ETS1B_CHICK Transforming protein p68/c-ets-1 OS=Gallus gallus GN=ETS1 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DP+QW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 112 DPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWE 171

Query: 66  HLEILQKE 73
           HLEILQKE
Sbjct: 172 HLEILQKE 179

This protein is the normal cellular product of chicken ETS. In the E26 virus, ETS is responsible for erythroblast transformation.

Gallus gallus (taxid: 9031)

>sp|P13474|ETS1A_CHICK Transforming protein p54/c-ets-1 OS=Gallus gallus GN=ETS1 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 52/68 (76%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DP+QW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL   P F+GDILWE
Sbjct: 68  DPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELRPDFVGDILWE 127

Query: 66  HLEILQKE 73
           HLEILQKE
Sbjct: 128 HLEILQKE 135

This protein is the normal cellular product of chicken ETS. In the E26 virus, ETS is responsible for erythroblast transformation.

Gallus gallus (taxid: 9031)

>sp|Q91712|ETS2B_XENLA Protein c-ets-2-B OS=Xenopus laevis GN=ets2-b PE=2 SV=1

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           +P  W E+NV QWL WA +EFSLE V   +F M G ++CS+GKE FLA AP F+GDILWE
Sbjct: 102 NPWLWDENNVLQWLLWAAKEFSLENVNFQKFLMNGHELCSLGKERFLALAPDFVGDILWE 161

Query: 66  HLEILQKEY 74
           HLE + KEY
Sbjct: 162 HLEEMMKEY 170

Xenopus laevis (taxid: 8355)

>sp|P18755|ETS1A_XENLA Protein c-ets-1-A OS=Xenopus laevis GN=ets1-a PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 53/68 (77%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPR+W++ +V +W+ WA+ EF+L+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 66  DPREWTDMHVREWVSWAVNEFTLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWE 125

Query: 66  HLEILQKE 73
           HLEILQK+
Sbjct: 126 HLEILQKD 133

Xenopus laevis (taxid: 8355)

>sp|P51023|PNT2_DROME ETS-like protein pointed, isoform P2/D OS=Drosophila melanogaster GN=pnt PE=2 SV=2

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
           DPR+W+E +V  WL WA  EFSL  + L  FY M+G+ +  +GKE FLA  PPF GDILW
Sbjct: 181 DPREWTEEHVIYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDLGKEKFLAITPPFTGDILW 240

Query: 65  EHLEILQKE 73
           EHL+ILQK+
Sbjct: 241 EHLDILQKD 249

Required for glial-neuronal cell interactions at the ventral midline which are necessary for the proper elaboration of commissures in the embryonic CNS.

Drosophila melanogaster (taxid: 7227)

>sp|P19102|ETS2A_XENLA Protein c-ets-2-A OS=Xenopus laevis GN=ets2-a PE=2 SV=2

 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 52/71 (73%)

Query: 4   LDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDIL 63
           L +P  W E+NV QWL WA +EFSL+ V   +F M G ++CS+GKE FLA AP F+GDIL
Sbjct: 100 LSNPWLWDENNVFQWLWWAAKEFSLQNVNFQKFLMNGHELCSLGKERFLALAPDFVGDIL 159

Query: 64  WEHLEILQKEY 74
           WEHLE + KE+
Sbjct: 160 WEHLEEMMKEH 170

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
242017229	191	conserved hypothetical protein [Pediculu	0.935	0.382	0.767	3e-29
240952647	609	ets2, putative [Ixodes scapularis] gi|21	0.858	0.110	0.746	9e-26
270010827	312	hypothetical protein TcasGA2_TC014509 [T	0.871	0.217	0.705	2e-25
345492703	671	PREDICTED: hypothetical protein LOC10067	0.858	0.099	0.779	2e-25
321473813	103	hypothetical protein DAPPUDRAFT_36179 [D	0.858	0.650	0.776	8e-25
189239154	488	PREDICTED: similar to Ets domain-contain	0.871	0.139	0.705	2e-24
307212301	284	ETS-like protein pointed, isoform P2 [Ha	0.871	0.239	0.753	4e-24
383862764	683	PREDICTED: uncharacterized protein LOC10	0.871	0.099	0.739	1e-23
328785918	687	PREDICTED: hypothetical protein LOC41291	0.871	0.098	0.739	6e-23
350400995	681	PREDICTED: hypothetical protein LOC10074	0.871	0.099	0.739	7e-23

>gi|242017229|ref|XP_002429094.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212513958|gb|EEB16356.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 67/73 (91%)

Query: 1   MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMG 60
           +  + DP+QW+E++VA WLCWAIREFSLEGV++ QFYM+GKDIC+MGKE+FLARAPPF G
Sbjct: 48  LNIVKDPKQWTETHVAHWLCWAIREFSLEGVSIQQFYMKGKDICAMGKENFLARAPPFTG 107

Query: 61  DILWEHLEILQKE 73
           DILWEHLEILQKE
Sbjct: 108 DILWEHLEILQKE 120

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|240952647|ref|XP_002399485.1| ets2, putative [Ixodes scapularis] gi|215490599|gb|EEC00242.1| ets2, putative [Ixodes scapularis]

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 50/67 (74%), Positives = 59/67 (88%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPRQW+E +VA WL WAIREFSLEGV +  F M+GKD+C++GKE+FL RAPPFMGDILWE
Sbjct: 57  DPRQWTEMDVAHWLGWAIREFSLEGVNMPNFAMKGKDMCALGKEAFLTRAPPFMGDILWE 116

Query: 66  HLEILQK 72
           HL+ILQK
Sbjct: 117 HLDILQK 123

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270010827|gb|EFA07275.1| hypothetical protein TcasGA2_TC014509 [Tribolium castaneum]

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/68 (70%), Positives = 60/68 (88%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPRQW+E++VA WL WA +EFSLE + LHQF M+GKDIC+MGK++F ARAP F+GDILWE
Sbjct: 178 DPRQWTENHVAHWLQWAAKEFSLECIPLHQFRMKGKDICAMGKDAFAARAPAFVGDILWE 237

Query: 66  HLEILQKE 73
           HLE+LQK+
Sbjct: 238 HLELLQKD 245

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492703|ref|XP_003426912.1| PREDICTED: hypothetical protein LOC100679497 [Nasonia vitripennis]

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)

Query: 7   PRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWE 65
           PRQWSES VA WL WAIREFSLEGV +  + +M GK IC+MGKESFLARAP FMGDILWE
Sbjct: 136 PRQWSESAVANWLQWAIREFSLEGVAMQSWQHMTGKQICAMGKESFLARAPAFMGDILWE 195

Query: 66  HLEILQKE 73
           HLEILQK+
Sbjct: 196 HLEILQKD 203

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321473813|gb|EFX84779.1| hypothetical protein DAPPUDRAFT_36179 [Daphnia pulex]

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 52/67 (77%), Positives = 60/67 (89%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPR WSES+V++WL WAI+EFSLEGV L  F MRG+D+C+MGKE+FLAR PPFMGDILWE
Sbjct: 37  DPRLWSESDVSRWLNWAIKEFSLEGVVLQHFRMRGRDMCAMGKENFLARTPPFMGDILWE 96

Query: 66  HLEILQK 72
           HLEILQK
Sbjct: 97  HLEILQK 103

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239154|ref|XP_971341.2| PREDICTED: similar to Ets domain-containing protein [Tribolium castaneum]

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/68 (70%), Positives = 60/68 (88%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DPRQW+E++VA WL WA +EFSLE + LHQF M+GKDIC+MGK++F ARAP F+GDILWE
Sbjct: 24 DPRQWTENHVAHWLQWAAKEFSLECIPLHQFRMKGKDICAMGKDAFAARAPAFVGDILWE 83

Query: 66 HLEILQKE 73
          HLE+LQK+
Sbjct: 84 HLELLQKD 91

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212301|gb|EFN88109.1| ETS-like protein pointed, isoform P2 [Harpegnathos saltator]

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 52/69 (75%), Positives = 58/69 (84%), Gaps = 1/69 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILW 64
          DPRQWSE+ VA WL WAI EFSLEGV +  + +M GK IC+MGKESFLARAP FMGDILW
Sbjct: 24 DPRQWSEAAVAHWLHWAIGEFSLEGVAVQPWQHMTGKQICAMGKESFLARAPAFMGDILW 83

Query: 65 EHLEILQKE 73
          EHLEILQK+
Sbjct: 84 EHLEILQKD 92

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862764|ref|XP_003706853.1| PREDICTED: uncharacterized protein LOC100878829 [Megachile rotundata]

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/69 (73%), Positives = 58/69 (84%), Gaps = 1/69 (1%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILW 64
           DPRQWSE+ VA WL WAI EFSLEGV +  + +M GK IC+MGKESFLARAP FMGDILW
Sbjct: 145 DPRQWSEAAVAHWLHWAIGEFSLEGVAMQPWQHMTGKQICAMGKESFLARAPAFMGDILW 204

Query: 65  EHLEILQKE 73
           EHLE+LQK+
Sbjct: 205 EHLELLQKD 213

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785918|ref|XP_003250677.1| PREDICTED: hypothetical protein LOC412916 [Apis mellifera]

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/69 (73%), Positives = 56/69 (81%), Gaps = 1/69 (1%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
           DPRQWSE+ VA WL WAI EFSL GV +  +  M GK IC+MGKESFLARAP FMGDILW
Sbjct: 144 DPRQWSEAAVAHWLHWAIGEFSLAGVAIQPWQNMTGKQICAMGKESFLARAPAFMGDILW 203

Query: 65  EHLEILQKE 73
           EHLEILQK+
Sbjct: 204 EHLEILQKD 212

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400995|ref|XP_003486023.1| PREDICTED: hypothetical protein LOC100745810 isoform 2 [Bombus impatiens]

 Score =  111 bits (277), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/69 (73%), Positives = 56/69 (81%), Gaps = 1/69 (1%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
           DPRQWSE+ VA WL WAI EFSL GV +  +  M GK IC+MGKESFLARAP FMGDILW
Sbjct: 144 DPRQWSEAAVAHWLHWAIGEFSLAGVAMQPWQNMTGKQICAMGKESFLARAPAFMGDILW 203

Query: 65  EHLEILQKE 73
           EHLEILQK+
Sbjct: 204 EHLEILQKD 212

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
UNIPROTKB|Q96AC5	272	ETS1 "V-ets erythroblastosis v	0.871	0.25	0.602	1.7e-20
RGD|2583	441	Ets1 "v-ets erythroblastosis v	0.871	0.154	0.617	2.6e-20
MGI|MGI:95455	440	Ets1 "E26 avian leukemia oncog	0.871	0.154	0.617	3.4e-20
UNIPROTKB|F1S6G9	415	ETS1 "Uncharacterized protein"	0.871	0.163	0.602	4.3e-20
UNIPROTKB|A5PJG9	441	ETS1 "Uncharacterized protein"	0.871	0.154	0.602	5.6e-20
UNIPROTKB|J9NXR6	441	ETS1 "Uncharacterized protein"	0.871	0.154	0.602	5.6e-20
UNIPROTKB|P14921	441	ETS1 "Protein C-ets-1" [Homo s	0.871	0.154	0.602	5.6e-20
UNIPROTKB|Q6Q428	441	c-ets1 "C-ets-1" [Oryctolagus	0.871	0.154	0.602	5.6e-20
UNIPROTKB|G9LQW2	441	TNIP1 "ETS-1A" [Gallus gallus	0.871	0.154	0.602	7.3e-20
UNIPROTKB|F1PRM7	485	ETS1 "Uncharacterized protein"	0.871	0.140	0.602	7.8e-20

UNIPROTKB|Q96AC5 ETS1 "V-ets erythroblastosis virus E26 oncogene homolog 1 (Avian), isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GK+ FL  AP F+GDILWE
Sbjct:    68 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWE 127

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   128 HLEILQKE 135

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

RGD|2583 Ets1 "v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)" [Rattus norvegicus (taxid:10116)]

 Score = 245 (91.3 bits), Expect = 2.6e-20, P = 2.6e-20
 Identities = 42/68 (61%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct:    68 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWE 127

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   128 HLEILQKE 135

GO:0001666 "response to hypoxia" evidence=IEP

GO:0003677 "DNA binding" evidence=ISO;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;ISS;IDA

GO:0005667 "transcription factor complex" evidence=IEA;ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0006917 "induction of apoptosis" evidence=IEA;ISO

GO:0007565 "female pregnancy" evidence=IEP

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0009611 "response to wounding" evidence=IEP

GO:0009612 "response to mechanical stimulus" evidence=IEP

GO:0010715 "regulation of extracellular matrix disassembly" evidence=IMP

GO:0021854 "hypothalamus development" evidence=IEP

GO:0021983 "pituitary gland development" evidence=IEP

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0030578 "PML body organization" evidence=IEA;ISO

GO:0032355 "response to estradiol stimulus" evidence=IEP

GO:0034616 "response to laminar fluid shear stress" evidence=IEP

GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA

GO:0045648 "positive regulation of erythrocyte differentiation" evidence=ISO;ISS

GO:0045766 "positive regulation of angiogenesis" evidence=IMP

GO:0045786 "negative regulation of cell cycle" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO;ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0046677 "response to antibiotic" evidence=IEA;ISO

GO:0048870 "cell motility" evidence=IEA;ISO

GO:0051272 "positive regulation of cellular component movement" evidence=ISO

GO:0060055 "angiogenesis involved in wound healing" evidence=IEP

GO:0060206 "estrous cycle phase" evidence=IEP

GO:0070301 "cellular response to hydrogen peroxide" evidence=IEP

GO:0070555 "response to interleukin-1" evidence=IEP

MGI|MGI:95455 Ets1 "E26 avian leukemia oncogene 1, 5' domain" [Mus musculus (taxid:10090)]

 Score = 244 (91.0 bits), Expect = 3.4e-20, P = 3.4e-20
 Identities = 42/68 (61%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct:    68 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWE 127

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   128 HLEILQKE 135

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005667 "transcription factor complex" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO

GO:0006917 "induction of apoptosis" evidence=ISO

GO:0008284 "positive regulation of cell proliferation" evidence=ISO

GO:0010715 "regulation of extracellular matrix disassembly" evidence=ISO

GO:0030335 "positive regulation of cell migration" evidence=ISO

GO:0030578 "PML body organization" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA

GO:0045648 "positive regulation of erythrocyte differentiation" evidence=ISO

GO:0045766 "positive regulation of angiogenesis" evidence=ISO

GO:0045786 "negative regulation of cell cycle" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IGI;IDA

GO:0046677 "response to antibiotic" evidence=ISO

GO:0048870 "cell motility" evidence=ISO

GO:0051272 "positive regulation of cellular component movement" evidence=ISO

UNIPROTKB|F1S6G9 ETS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 242 (90.2 bits), Expect = 4.3e-20, P = 4.3e-20
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GK+ FL  AP F+GDILWE
Sbjct:    42 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWE 101

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   102 HLEILQKE 109

GO:0051272 "positive regulation of cellular component movement" evidence=IEA

GO:0048870 "cell motility" evidence=IEA

GO:0046677 "response to antibiotic" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045786 "negative regulation of cell cycle" evidence=IEA

GO:0045648 "positive regulation of erythrocyte differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0030578 "PML body organization" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

UNIPROTKB|A5PJG9 ETS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 242 (90.2 bits), Expect = 5.6e-20, P = 5.6e-20
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GK+ FL  AP F+GDILWE
Sbjct:    68 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWE 127

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   128 HLEILQKE 135

GO:0051272 "positive regulation of cellular component movement" evidence=IEA

GO:0048870 "cell motility" evidence=IEA

GO:0046677 "response to antibiotic" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045786 "negative regulation of cell cycle" evidence=IEA

GO:0045648 "positive regulation of erythrocyte differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0030578 "PML body organization" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

UNIPROTKB|J9NXR6 ETS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 242 (90.2 bits), Expect = 5.6e-20, P = 5.6e-20
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GK+ FL  AP F+GDILWE
Sbjct:    68 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWE 127

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   128 HLEILQKE 135

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

UNIPROTKB|P14921 ETS1 "Protein C-ets-1" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 5.6e-20, P = 5.6e-20
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GK+ FL  AP F+GDILWE
Sbjct:    68 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWE 127

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   128 HLEILQKE 135

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0007565 "female pregnancy" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0009612 "response to mechanical stimulus" evidence=IEA

GO:0010715 "regulation of extracellular matrix disassembly" evidence=IEA

GO:0021854 "hypothalamus development" evidence=IEA

GO:0021983 "pituitary gland development" evidence=IEA

GO:0030335 "positive regulation of cell migration" evidence=IEA

GO:0032355 "response to estradiol stimulus" evidence=IEA

GO:0034616 "response to laminar fluid shear stress" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0060055 "angiogenesis involved in wound healing" evidence=IEA

GO:0060206 "estrous cycle phase" evidence=IEA

GO:0070301 "cellular response to hydrogen peroxide" evidence=IEA

GO:0070555 "response to interleukin-1" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA

GO:0045786 "negative regulation of cell cycle" evidence=IDA;IMP

GO:0003677 "DNA binding" evidence=ISS

GO:0008134 "transcription factor binding" evidence=NAS

GO:0045648 "positive regulation of erythrocyte differentiation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0046677 "response to antibiotic" evidence=IDA

GO:0006917 "induction of apoptosis" evidence=IDA

GO:0006955 "immune response" evidence=TAS

GO:0008285 "negative regulation of cell proliferation" evidence=TAS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0030578 "PML body organization" evidence=IDA

GO:0048870 "cell motility" evidence=IMP

GO:0051272 "positive regulation of cellular component movement" evidence=IMP

UNIPROTKB|Q6Q428 c-ets1 "C-ets-1" [Oryctolagus cuniculus (taxid:9986)]

 Score = 242 (90.2 bits), Expect = 5.6e-20, P = 5.6e-20
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GK+ FL  AP F+GDILWE
Sbjct:    68 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWE 127

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   128 HLEILQKE 135

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0045648 "positive regulation of erythrocyte differentiation" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

UNIPROTKB|G9LQW2 TNIP1 "ETS-1A" [Gallus gallus (taxid:9031)]

 Score = 241 (89.9 bits), Expect = 7.3e-20, P = 7.3e-20
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DP+QW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct:    68 DPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWE 127

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   128 HLEILQKE 135

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1PRM7 ETS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 242 (90.2 bits), Expect = 7.8e-20, P = 7.8e-20
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query:     6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
             DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GK+ FL  AP F+GDILWE
Sbjct:   112 DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWE 171

Query:    66 HLEILQKE 73
             HLEILQKE
Sbjct:   172 HLEILQKE 179

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P41156	ETS1_RAT	No assigned EC number	0.6176	0.8717	0.1541	yes	N/A
P51023	PNT2_DROME	No assigned EC number	0.5797	0.8717	0.0947	yes	N/A
P15062	ETS1B_CHICK	No assigned EC number	0.6029	0.8717	0.1402	yes	N/A
P27577	ETS1_MOUSE	No assigned EC number	0.6176	0.8717	0.1545	yes	N/A
P14921	ETS1_HUMAN	No assigned EC number	0.6029	0.8717	0.1541	yes	N/A
P13474	ETS1A_CHICK	No assigned EC number	0.5882	0.8717	0.1541	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	78
cd08533	71	cd08533, SAM_PNT-ETS-1,2, Sterile alpha motif (SAM	3e-39
cd08542	88	cd08542, SAM_PNT-ETS-1, Sterile alpha motif (SAM)/	1e-28
cd08543	89	cd08543, SAM_PNT-ETS-2, Sterile alpha motif (SAM)/	1e-27
smart00251	82	smart00251, SAM_PNT, SAM / Pointed domain	1e-25
pfam02198	83	pfam02198, SAM_PNT, Sterile alpha motif (SAM)/Poin	2e-25
cd08534	89	cd08534, SAM_PNT-GABP-alpha, Sterile alpha motif (	3e-23
cd08203	67	cd08203, SAM_PNT, Sterile alpha motif (SAM)/Pointe	1e-22
cd08535	68	cd08535, SAM_PNT-Tel_Yan, Sterile alpha motif (SAM	1e-18
cd08532	81	cd08532, SAM_PNT-PDEF-like, Sterile alpha motif (S	9e-17
cd08531	75	cd08531, SAM_PNT-ERG_FLI-1, Sterile alpha motif (S	3e-16
cd08540	75	cd08540, SAM_PNT-ERG, Sterile alpha motif (SAM)/Po	2e-12
cd08536	66	cd08536, SAM_PNT-Mae, Sterile alpha motif (SAM)/Po	3e-12
cd08541	91	cd08541, SAM_PNT-FLI-1, Sterile alpha motif (SAM)/	8e-12

>gnl|CDD|188879 cd08533, SAM_PNT-ETS-1,2, Sterile alpha motif (SAM)/Pointed domain of ETS-1,2 family

 Score =  124 bits (312), Expect = 3e-39
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DPRQWSE+ VA WL WA  EFSLEGV L  F M G+D+C++GKE+FL+ APPF+GDILWE
Sbjct: 3  DPRQWSETQVAYWLDWAANEFSLEGVNLSNFCMSGRDMCALGKEAFLSLAPPFVGDILWE 62

Query: 66 HLEILQKE 73
          HL+ILQKE
Sbjct: 63 HLDILQKE 70

SAM Pointed domain of ETS-1,2 family of transcriptional activators is a protein-protein interaction domain. It carries a kinase docking site and mediates interaction between ETS transcriptional activators and protein kinases. This group of transcriptional factors is involved in the Ras/MAP kinase signaling pathway. MAP kinases phosphorylate the transcription factors. Phosphorylated factors then recruit coactivators and enhance transactivation. Members of this group play a role in regulation of different embryonic developmental processes. ETS-1,2 transcriptional activators are proto-oncogenes involved in malignant transformation and tumor progression. They are potential molecular targets for selective cancer therapy. Length = 71

>gnl|CDD|176092 cd08542, SAM_PNT-ETS-1, Sterile alpha motif (SAM)/Pointed domain of ETS-1

 Score = 97.4 bits (242), Expect = 1e-28
 Identities = 41/68 (60%), Positives = 54/68 (79%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DPR+W+E++V +W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 18 DPREWTETHVREWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWE 77

Query: 66 HLEILQKE 73
          HLEILQKE
Sbjct: 78 HLEILQKE 85

SAM Pointed domain of ETS-1 subfamily of ETS transcriptional activators is a protein-protein interaction domain. The ETS-1 activator is regulated by phosphorylation. It contains a docking site for the ERK2 MAP (Mitogen Activated Protein) kinase, while the ERK2 phosphorylation site is located in the N-terminal disordered region upstream of the SAM Pointed domain. Mutations of the kinase docking site residues inhibit phosphorylation. ETS-1 activators play a role in a number of different physiological processes, and they are expressed during embryonic development, including blood vessel formation, hematopoietic, lymphoid, neuronal and osteogenic differentiation. The Ets-1 gene is a proto-oncogene involved in progression of different tumors (including breast cancer, meningioma, and prostate cancer). Members of this subfamily are potential molecular targets for selective cancer therapy. Length = 88

>gnl|CDD|188884 cd08543, SAM_PNT-ETS-2, Sterile alpha motif (SAM)/Pointed domain of ETS-2

 Score = 94.9 bits (236), Expect = 1e-27
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 4  LDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDIL 63
            +P  W+E  V QWL WA  EFSL  V   QF M G+++C++GKE FL  AP F+GDIL
Sbjct: 16 PKNPWLWTEQQVCQWLLWATNEFSLVNVNFQQFLMNGQELCNLGKERFLELAPDFVGDIL 75

Query: 64 WEHLEILQKE 73
          WEHLE + KE
Sbjct: 76 WEHLEQMIKE 85

SAM Pointed domain of ETS-2 subfamily of ETS transcriptional regulators is a protein-protein interaction domain. It contains a docking site for Cdk10 (cyclin-dependent kinase 10), a member of the Cdc2 kinase family. The interaction between ETS-2 and Cdk10 kinase inhibits ETS-2 transactivation activity in mammals. ETS-2 is also regulated by ERK2 MAP kinase. ETS-2, which is phosphorylated by ERK2, can interact with coactivators and enhance transactivation. ETS-2 transcriptional activators are involved in embryonic development and cell cycle control. The Ets-2 gene is a proto-oncogene. It is overexpressed in breast and prostate cancer cells and its overexpression is necessary for transformation of such cells. Members of ETS-2 subfamily are potential molecular targets for selective cancer therapy. Length = 89

>gnl|CDD|128547 smart00251, SAM_PNT, SAM / Pointed domain

 Score = 89.6 bits (223), Expect = 1e-25
 Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP+ W+E +V +WL WA++EFSL  +   +F M GK++CSM KE FL RA PF GDILW 
Sbjct: 16 DPQLWTEDHVLEWLEWAVKEFSLSPIDFSKFDMSGKELCSMSKEEFLERA-PFGGDILWS 74

Query: 66 HLEILQKE 73
          HL+IL+K 
Sbjct: 75 HLQILRKA 82

A subfamily of the SAM domain. Length = 82

>gnl|CDD|202149 pfam02198, SAM_PNT, Sterile alpha motif (SAM)/Pointed domain

 Score = 89.3 bits (222), Expect = 2e-25
 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP  W+E +V +WL WA++EFSL  +    F M G+++CSM KE FL RA PF GDILWE
Sbjct: 16 DPNLWTEDHVLEWLEWAVKEFSLSPIDFSNFDMSGRELCSMSKEEFLERA-PFPGDILWE 74

Query: 66 HLEILQKE 73
          HL+ L+K 
Sbjct: 75 HLQNLRKA 82

Length = 83

>gnl|CDD|176084 cd08534, SAM_PNT-GABP-alpha, Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain

 Score = 83.9 bits (208), Expect = 3e-23
 Identities = 31/68 (45%), Positives = 46/68 (67%)

Query: 5  DDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILW 64
           DP +W+E +V  WL WA++EF L G+ L  + + G+++CS+ +E FL R P   GDI W
Sbjct: 17 YDPMEWTEDHVLHWLQWAVKEFGLTGINLSDWNITGRELCSLTQEEFLQRVPKDPGDIFW 76

Query: 65 EHLEILQK 72
           HLE+L+K
Sbjct: 77 THLELLRK 84

SAM Pointed domain of GA-binding protein (GABP) alpha subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. This type of transcriptional regulators forms heterotetramers containing two alpha and two beta subunits. It interacts with GA repeats (purine rich repeats). GABP transcriptional factors control gene expression in cell cycle control, apoptosis, and cellular respiration. GABP participates in regulation of transmembrane receptors and key hormones especially in myeloid cells and at the neuromuscular junction. Length = 89

>gnl|CDD|188876 cd08203, SAM_PNT, Sterile alpha motif (SAM)/Pointed domain

 Score = 81.6 bits (202), Expect = 1e-22
 Identities = 29/67 (43%), Positives = 44/67 (65%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP +W+  +V QWL W  ++FSL+ +   +F M GK++C++ KE F  RAP   GD+L  
Sbjct: 1  DPLEWTPEHVQQWLSWVSKKFSLDPIDPDRFPMNGKELCALSKEDFRERAPSRGGDVLAS 60

Query: 66 HLEILQK 72
          HL +L+K
Sbjct: 61 HLALLRK 67

Sterile alpha motif (SAM)/Pointed domain is found in about 40% of transcriptional regulators of ETS family (initially named for Erythroblastosis virus, E26-E Twenty Six). SAM Pointed domain containing proteins of this family additionally have a C-terminal ETS DNA-binding domain. In a few cases, SAM Pointed domain appears as a single domain protein. Members of this group are mostly involved in regulation of embryonic development and growth control in eukaryotes. SAM Pointed domains mediate protein-protein interactions. Depending on the subgroup, they can interact with other SAM Pointed domains forming homo or hetero dimers/oligomers and/or they can recruit a protein kinase to its target which can be a SAM Pointed domain containing protein itself or another protein that has no kinase docking site. Thus, SAM Pointed domains participate in transcriptional regulation and signal transduction. Some genes coding ETS family transcriptional regulators are proto-oncogenes. They are prone to chromosomal translocations resulting in gene fusions. Chimeric proteins with SAM Pointed domains were found in a number of different human tumors including myeloid leukemia, lymphoblastic leukemia, Ewing's sarcoma and primitive neuroectodermal tumor. Members of this family are potential targets for cancer therapy. Length = 67

>gnl|CDD|176085 cd08535, SAM_PNT-Tel_Yan, Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein

 Score = 71.7 bits (176), Expect = 1e-18
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           PRQWS  +V QWL WA  EFSL  +  + F M GK +C + KE F  R  P  GD+L+ 
Sbjct: 2  QPRQWSREDVLQWLRWAENEFSLPPIDSNTFEMNGKALCLLTKEDFRYRC-PHAGDVLYN 60

Query: 66 HLEILQKE 73
           L+ L K+
Sbjct: 61 LLQHLLKQ 68

SAM Pointed domain of Tel (Translocation, Ets, Leukemia)/Yan subfamily of ETS transcriptional repressors is a protein-protein interaction domain. SAM Pointed domains of this type of regulators can interact with each other, forming head-to-tail homodimers or homooligomers, and/or interact with SAM Pointed domains of another subfamily of ETS factors forming heterodimers. The oligomeric form is able to block transcription of target genes and is involved in MAPK signaling. They participate in regulation of different processes during embryoniv development including hematopoietic differentiation and eye development. Tel/Yan transcriptional factors are frequent targets of chromosomal translocations resulting in fusions of SAM domain with new neighboring genes. Such chimeric proteins were found in different tumors. Members of this subfamily are potential targets for cancer therapy. Length = 68

>gnl|CDD|188878 cd08532, SAM_PNT-PDEF-like, Sterile alpha motif (SAM)/Pointed domain of prostate-derived ETS factor

 Score = 67.4 bits (165), Expect = 9e-17
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP QWS +NV  WL W   ++ L       F M GK +C++ +E F+ RAP   GD L  
Sbjct: 13 DPYQWSTANVQAWLQWTEHQYRLPPNPPRCFQMNGKTLCALSEEDFVRRAPQ-GGDTLHA 71

Query: 66 HLEI 69
           LEI
Sbjct: 72 QLEI 75

SAM Pointed domain of PDEF-like (Prostate-Derived ETS Factor) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. In human males this activator is highly expressed in the prostate gland and enhances androgen-mediated activation of the PSA promoter though interaction with the DNA binding domain of androgen receptor. PDEF may play a role in prostate cancer development as well as in goblet cell formation and mucus production in the epithelial lining of respiratory and intestinal tracts. Length = 81

>gnl|CDD|188877 cd08531, SAM_PNT-ERG_FLI-1, Sterile alpha motif (SAM)/Pointed domain of ERG (Ets related gene) and FLI-1 (Friend leukemia integration 1) transcription factors

 Score = 65.9 bits (161), Expect = 3e-16
 Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILW 64
          DP  W+  +V QW+ WAI+E+SL+ V + +F  + GK++C M ++ FL     + GD+L 
Sbjct: 4  DPLLWTREHVRQWVEWAIKEYSLKDVDVSRFDNIDGKELCRMTRDDFLRLTSAYNGDVLI 63

Query: 65 EHLEILQKEYL 75
           HL  L++  L
Sbjct: 64 SHLCYLRQTPL 74

SAM Pointed domain of ERG/FLI-1 subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The ERG and FLI regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. They are proto-oncogenes implicated in cancer development such as myeloid leukemia, Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy. Length = 75

>gnl|CDD|176090 cd08540, SAM_PNT-ERG, Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor

 Score = 55.7 bits (134), Expect = 2e-12
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
          DP  WS  +V QWL WA++E+ L  V +  F  + GK++C M KE F    P +  DIL 
Sbjct: 4  DPTLWSTDHVRQWLEWAVKEYGLPDVDVLLFQNIDGKELCKMTKEDFQRLTPSYNADILL 63

Query: 65 EHLEILQK 72
           HL  L++
Sbjct: 64 SHLHYLRE 71

SAM Pointed domain of ERG subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It may participate in formation of homodimers or heterodimers with ETS-2, Fli-1, ER81, and Pu-1. However, dimeric forms are inactive and SAM Pointed domain is not essential for dimerization, since ER81 and Pu-1 do not have it. In mouse, a regulator of this type binds the ESET histone H3-specific methyltransferase (human homolog is SETDB1), which leads to modification of the local chromatin structure through histone methylation. ERG regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. The Erg gene is a proto-oncogene. It is a target of chromosomal translocations resulting in fusions with other neighboring genes. Chimeric proteins were found in solid tumors such as myeloid leukemia or Ewing's sarcoma. Members of this subfamily are potential targets for cancer therapy. Length = 75

>gnl|CDD|176086 cd08536, SAM_PNT-Mae, Sterile alpha motif (SAM)/Pointed domain of Mae protein homolog

 Score = 55.4 bits (134), Expect = 3e-12
 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DPR WS  +V  WL W    + LE V L +F M GK +C M  E FL R  P  G +L+E
Sbjct: 1  DPRSWSREHVRTWLRWVSARYQLEVVDLDKFLMNGKGLCLMSLEGFLYRV-PVGGKLLYE 59

Mae (Modulator of the Activity of ETS) subfamily represents a group of SAM Pointed monodomain proteins. SAM Pointed domain is a protein-protein interaction domain. It can interact with other SAM pointed domains forming head-to-tail heterodimers and also provides a kinase docking site. For example, in Drosophila Mae is required for facilitating phosphorylation of the Yan factor and for blocking phosphorylation of the ETS-2 regulator. Mae interacts with the SAM Pointed domains of Yan and ETS-2. Binding enhances access of the kinase to the Yan phosphorylation site by providing a kinase docking site, or inhibits phosphorylation of ETS-2 by blocking its docking site. This type of factors participates in regulation of kinase signaling particularly during embryogenesis. Length = 66

>gnl|CDD|188883 cd08541, SAM_PNT-FLI-1, Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator

 Score = 55.1 bits (132), Expect = 8e-12
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
          DP  WS+ +V QWL WAI+E+ L  +    F  M GK++C M KE FL     +  ++L 
Sbjct: 16 DPTLWSQDHVRQWLEWAIKEYGLMEIDTSLFQNMDGKELCKMSKEDFLRLTSLYNTEVLL 75

Query: 65 EHLEILQKEYLVI 77
           HL  L++    +
Sbjct: 76 SHLNYLRESSSSL 88

SAM Pointed domain of FLI-1 (Friend Leukemia Integration) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The FLI-1 protein participates in regulation of cellular differentiation, proliferation, and survival. The Fli-1 gene was initially described in Friend virus-induced erythroleukemias as a site for virus integration. It is highly expressed in hematopoietic tissues and at lower level in lungs, heart, and ovaries. Fli-1 is a proto-oncogene implicated in Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy. Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	78
cd08540	75	SAM_PNT-ERG Sterile alpha motif (SAM)/Pointed doma	100.0
cd08534	89	SAM_PNT-GABP-alpha Sterile alpha motif (SAM)/Point	100.0
cd08533	71	SAM_PNT-ETS-1,2 Sterile alpha motif (SAM)/Pointed	100.0
cd08531	75	SAM_PNT-ERG_FLI-1 Sterile alpha motif (SAM)/Pointe	100.0
cd08542	88	SAM_PNT-ETS-1 Sterile alpha motif (SAM)/Pointed do	100.0
cd08532	76	SAM_PNT-PDEF-like Sterile alpha motif (SAM)/Pointe	100.0
cd08543	89	SAM_PNT-ETS-2 Sterile alpha motif (SAM)/Pointed do	100.0
cd08541	91	SAM_PNT-FLI-1 Sterile alpha motif (SAM)/Pointed do	100.0
cd08535	68	SAM_PNT-Tel_Yan Sterile alpha motif (SAM)/Pointed	100.0
smart00251	82	SAM_PNT SAM / Pointed domain. A subfamily of the S	100.0
cd08203	66	SAM_PNT Sterile alpha motif (SAM)/Pointed domain.	100.0
PF02198	84	SAM_PNT: Sterile alpha motif (SAM)/Pointed domain;	100.0
cd08536	66	SAM_PNT-Mae Sterile alpha motif (SAM)/Pointed doma	100.0
cd08538	78	SAM_PNT-ESE-2-like Sterile alpha motif (SAM)/Point	99.98
cd08757	68	SAM_PNT_ESE Sterile alpha motif (SAM)/Pointed doma	99.98
cd08537	78	SAM_PNT-ESE-1-like Sterile alpha motif (SAM)/Point	99.96
cd08539	74	SAM_PNT-ESE-3-like Sterile alpha motif (SAM)/Point	99.96
KOG3804|consensus	390		99.54
KOG3805|consensus	361		97.82
PF00536	64	SAM_1: SAM domain (Sterile alpha motif); InterPro:	97.21
PF07647	66	SAM_2: SAM domain (Sterile alpha motif); InterPro:	96.99
cd00166	63	SAM Sterile alpha motif.; Widespread domain in sig	96.45
KOG4375|consensus	272		95.77
smart00454	68	SAM Sterile alpha motif. Widespread domain in sign	95.76

>cd08540 SAM_PNT-ERG Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor

Probab=100.00  E-value=6.4e-39  Score=193.23  Aligned_cols=73  Identities=38%  Similarity=0.784  Sum_probs=70.7

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcc
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYL   75 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~   75 (78)
                      ||+||++||++||.+||+|+++||+|+++++++| .|||++||.||+|||.+++|+++|||||+||++||++.+
T Consensus         1 iP~DP~~Wt~~~V~~WL~Wa~~ef~L~~~~~~~F~~m~Gk~LC~LskedF~~~ap~~~GdiL~~HL~~Lr~~~~   74 (75)
T cd08540           1 VPADPTLWSTDHVRQWLEWAVKEYGLPDVDVLLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLRETPL   74 (75)
T ss_pred             CCCChhhcCHHHHHHHHHHHHHHhCCCCCCcccccCCCHHHHHhCCHHHHHHHcCCCCchHHHHHHHHHHhCCC
Confidence            7999999999999999999999999999999999 599999999999999999998899999999999999874

SAM Pointed domain of ERG subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It may participate in formation of homodimers or heterodimers with ETS-2, Fli-1, ER81, and Pu-1. However, dimeric forms are inactive and SAM Pointed domain is not essential for dimerization, since ER81 and Pu-1 do not have it. In mouse, a regulator of this type binds the ESET histone H3-specific methyltransferase (human homolog is SETDB1), followed by modification of local chromatin structure through histone methylation. ERG regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. The Erg gene is a proto-oncogene. It is a target of chromosomal translocations resulting in fusions with new neighboring genes. Chimeric proteins were found in solid tumors such as myeloid leukemia or Ewing's sarcoma. Members of this subfamily are po

>cd08534 SAM_PNT-GABP-alpha Sterile alpha motif (SAM)/Pointed domain of GA-binding protein alpha chain

Probab=100.00  E-value=1.3e-38  Score=197.18  Aligned_cols=75  Identities=40%  Similarity=0.897  Sum_probs=72.9

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhccc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLV   76 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~   76 (78)
                      -||+||+.||++||.+||+|+++||+|+++++++|+|||++||.||+|||.+|+|.++|||||+||++||+++.|
T Consensus        14 ~IP~DP~~Wt~~~V~~WL~Wa~~ef~L~~v~~~~F~m~Gk~LC~Ls~edF~~r~p~~~GdiL~~hLe~Lrk~~~~   88 (89)
T cd08534          14 KIPYDPMEWTEDQVLHWVVWAVKEFSLTDIDLSDWNITGRELCSLTQEEFFQRVPKDPGDIFWTHLELLRKCKFV   88 (89)
T ss_pred             CCCCChHHcCHHHHHHHHHHHHHHcCCCCCChhhcCCCHHHHhcCCHHHHHHHcCCCccHHHHHHHHHHHHcccc
Confidence            589999999999999999999999999999999999999999999999999999977999999999999999987

SAM Pointed domain of GABP-alpha subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. This type of transcriptional regulators forms heterotetramers containing two alpha and two beta subunits. It interacts with GA repeats (purine rich repeats). GABP transcriptional factors control gene expression in cell cycle control, apoptosis, and cellular respiration. GABP participates in regulation of transmembrane receptors and key hormones especially in myeloid cells and at the neuromuscular junction.

>cd08533 SAM_PNT-ETS-1,2 Sterile alpha motif (SAM)/Pointed domain of ETS-1,2 family

Probab=100.00  E-value=1.5e-38  Score=189.86  Aligned_cols=71  Identities=63%  Similarity=1.237  Sum_probs=69.0

Q ss_pred             CCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          4 LDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         4 P~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      |+||+.||++||.+||+|+++||+|+++++++|+|||++||+||+|||.+++|+++|||||+||++||+.+
T Consensus         1 P~DP~~Wt~~~V~~WL~Wa~~ef~L~~v~~~~F~m~Gk~LC~ls~edF~~~~p~~~GdIL~~hL~~L~k~~   71 (71)
T cd08533           1 PKDPRLWTETHVRQWLLWAVNEFSLEGVNFQKFCMSGRDLCALGKERFLELAPDFVGDILWEHLEILQKEC   71 (71)
T ss_pred             CcChhhCCHHHHHHHHHHHHHHcCCCCCCcccCCCCHHHHHcCCHHHHHHHcCCCcchHHHHHHHHHHhcC
Confidence            89999999999999999999999999999999999999999999999999999879999999999999864

SAM Pointed domain of ETS-1,2 family of transcriptional activators is a protein-protein interaction domain. It carries a kinase docking site and mediates interaction between ETS transcriptional activators and protein kinases. This group of transcriptional factors is involved in the Ras/MAP kinase signaling pathway. MAP kinases phosphorylate the transcription factors. Phosphorylated factors then recruit coactivators and enhance transactivation. Members of this group play a role in regulation of different embryonic developmental processes. ETS-1,2 transcriptional activators are proto-oncogenes involved in malignant transformation and tumor progression. They are potential molecular targets for selective cancer therapy.

>cd08531 SAM_PNT-ERG_FLI-1 Sterile alpha motif (SAM)/Pointed domain of ERG (Ets related gene) and FLI-1 (Friend leukemia integration 1) transcription factors

Probab=100.00  E-value=1.7e-38  Score=191.38  Aligned_cols=73  Identities=37%  Similarity=0.806  Sum_probs=70.7

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcc
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYL   75 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~   75 (78)
                      ||+||+.||++||.+||+|+++||+|+++++++| +|||++||+||+|||.+++|+++|||||+||++||++.+
T Consensus         1 vP~DP~~Wt~~~V~~WL~Wa~~ef~L~~i~~~~F~~m~Gk~LC~lt~edF~~~~~~~~GdiL~~hL~~Lr~~~~   74 (75)
T cd08531           1 VPADPTLWTREHVRQWLEWAVKEYGLQDVDVSRFQNIDGKELCKMTKEDFLRLTSAYNADVLLSHLSYLRESPL   74 (75)
T ss_pred             CCCChhhcCHHHHHHHHHHHHHHcCCCCCChhhccCCChHHHHcCCHHHHHHHcCCCcchHHHHHHHHHHhCCC
Confidence            7999999999999999999999999999999999 999999999999999999998899999999999999864

SAM Pointed domain of ERG/FLI-1 subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The ERG and FLI regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. They are proto-oncogenes implicated in cancer development such as myeloid leukemia, Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.

>cd08542 SAM_PNT-ETS-1 Sterile alpha motif (SAM)/Pointed domain of ETS-1

Probab=100.00  E-value=3.1e-38  Score=195.03  Aligned_cols=74  Identities=57%  Similarity=1.122  Sum_probs=71.4

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYL   75 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~   75 (78)
                      -||+||++||++||.+||+|+++||+|+++++++|+|||++||+||+|||++|+|+++|||||+||++||+.+.
T Consensus        14 ~Ip~DP~~Wt~~~V~~WL~Wa~~ef~L~~i~~~~F~m~Gk~LC~Ls~edF~~~~P~~~GdIL~~HL~~L~k~~~   87 (88)
T cd08542          14 GIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEDV   87 (88)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHHcCCCCCCcccCCCCHHHHHcCCHHHHHhHcCCCccHHHHHHHHHHHHhcc
Confidence            48999999999999999999999999999999999999999999999999999998799999999999999764

SAM Pointed domain of ETS-1 subfamily of ETS transcriptional activators is a protein-protein interaction domain. The ETS-1 activator is regulated by phosphorylation. It contains a docking site for the ERK2 MAP (Mitogen Activated Protein) kinase, while the ERK2 phosphorylation site is located in the N-terminal disordered region upstream of the SAM Pointed domain. Mutations of the kinase docking site residues inhibit phosphorylation. ETS-1 activators play role in a number of different physiological processes, and they are expressed during embryonic development, including blood vessel formation, hematopoietic, lymphoid, neuronal and osteogenic differentiation. The Ets-1 gene is a proto-oncogene involved in progression of different tumors (including breast cancer, meningioma, and prostate cancer). Members of this subfamily are potential molecular targets for selective cancer therapy.

>cd08532 SAM_PNT-PDEF-like Sterile alpha motif (SAM)/Pointed domain of prostate-derived ETS factor

Probab=100.00  E-value=4.1e-37  Score=185.77  Aligned_cols=71  Identities=37%  Similarity=0.708  Sum_probs=68.6

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      -||+||+.||++||.+||+|+++||+|++ ++++|+|||++||.||+|||++|+|. +|||||+||++||+++
T Consensus         5 ~ip~DP~~Ws~~~V~~WL~w~~~ef~L~~-~~~~F~mnG~~LC~ls~edF~~r~p~-~GdiL~~hL~~lk~a~   75 (76)
T cd08532           5 GISPDPYQWSPANVQKWLLWTEHQYRLPP-PPRCFELNGKDLCALSEEDFRRRAPQ-GGDTLHAQLDIWKSAA   75 (76)
T ss_pred             CCCCChhhcCHHHHHHHHHHHHHHhCCCC-chhcCCCCHHHHHcCCHHHHHHHcCC-chhHHHHHHHHHHHhh
Confidence            48999999999999999999999999999 99999999999999999999999997 9999999999999874

SAM Pointed domain of PDEF-like (Prostate-Derived ETS Factor) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. In human males this activator is highly expressed in the prostate gland and enhances androgen-mediated activation of the PSA promoter though interaction with the DNA binding domain of androgen receptor. PDEF may play a role in prostate cancer development as well as in goblet cell formation and mucus production in the epithelial lining of respiratory and intestinal tracts.

>cd08543 SAM_PNT-ETS-2 Sterile alpha motif (SAM)/Pointed domain of ETS-2

Probab=100.00  E-value=5.7e-37  Score=189.72  Aligned_cols=73  Identities=52%  Similarity=0.988  Sum_probs=70.6

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      -||+||+.||++||.+||+|+++||+|++++++.|.|||++||.||+|||++++|+++|||||+||+.|.+.+
T Consensus        14 ~Ip~DP~~Wt~~~V~~WL~Wa~~ef~L~~i~~~~F~m~Gk~LC~Ls~edF~~~ap~~~GdIL~~HL~~l~k~~   86 (89)
T cd08543          14 GIPKNPWLWTEQQVCQWLLWATNEFSLVNVNFQQFGMNGQELCNLGKERFLELAPDFVGDILWEHLEQMIKEN   86 (89)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHHcCCCCCCcccCCCChHHHHcCCHHHHHhHcCCCcchHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999999999999779999999999999865

SAM Pointed domain of ETS-2 subfamily of ETS transcriptional regulators is a protein-protein interaction domain. It contains a docking site for Cdk10 (cyclin-dependent kinase 10), a member of the Cdc2 kinase family. The interaction between ETS-2 and Cdk10 kinase inhibits ETS-2 transactivation activity in mammals. ETS-2 is also regulated by ERK2 MAP kinase. ETS-2, which is phosphorylated by ERK2, can interact with coactivators and enhance transactivation. ETS-2 transcriptional activators are involved in embryonic development and cell cycle control. The Ets-2 gene is a proto-oncogene. It is overexpressed in breast and prostate cancer cells and its overexpression is necessary for transformation of such cells. Members of ETS-2 subfamily are potential molecular targets for selective cancer therapy.

>cd08541 SAM_PNT-FLI-1 Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator

Probab=100.00  E-value=5.2e-37  Score=190.58  Aligned_cols=74  Identities=35%  Similarity=0.737  Sum_probs=71.4

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      +.||+||+.||++||++||+|+++||+|+++++++| .|||++||.||+|||.+++|.++|||||+||++||++.
T Consensus        11 l~IP~DP~~Wt~~hV~~WL~Wa~~ef~L~~vd~~~F~~m~Gk~LC~LskedF~~~~p~~~gdiLw~HL~~Lr~~~   85 (91)
T cd08541          11 VIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESS   85 (91)
T ss_pred             eeCCCChhhcCHHHHHHHHHHHHHHcCCCCCChhhccCCCHHHHHhCCHHHHHHHcCCCccHHHHHHHHHHHhCc
Confidence            469999999999999999999999999999999999 59999999999999999999889999999999999976

SAM Pointed domain of FLI-1 (Friend Leukemia Integration) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The FLI-1 protein participates in regulation of cellular differentiation, proliferation, and survival. The Fli-1 gene was initially described in Friend virus-induced erythroleukemias as a site for virus integration. It is highly expressed in hematopoietic tissues and at lower level in lungs, heart, and ovaries. Fli-1 is a proto-oncogene implicated in Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.

>cd08535 SAM_PNT-Tel_Yan Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein

Probab=100.00  E-value=9.3e-36  Score=176.56  Aligned_cols=67  Identities=46%  Similarity=0.823  Sum_probs=65.1

Q ss_pred             CCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHH
Q psy15116          5 DDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQK   72 (78)
Q Consensus         5 ~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~   72 (78)
                      .||+.||++||.+||+|+++||+|+++++++|+|||++||.||+|||.+|+|. +|||||+||++||+
T Consensus         1 ~DP~~Wt~~~V~~WL~wa~~ef~L~~i~~~~F~mnGk~LC~ls~edF~~r~p~-~GdiL~~hL~~L~~   67 (68)
T cd08535           1 LQPRYWSRDDVLQWLRWAENEFSLPPIDSNTFEMNGKALCLLTKEDFRYRSPH-SGDVLYELLQHLLK   67 (68)
T ss_pred             CChhhCCHHHHHHHHHHHHHhcCCCCCChhccCCCHHHHhcCCHHHHhhhCCC-chHHHHHHHHHHHh
Confidence            49999999999999999999999999999999999999999999999999994 99999999999997

SAM Pointed domain of Tel (Translocation, Ets, Leukemia)/Yan subfamily of ETS transcriptional repressors is a protein-protein interaction domain. SAM Pointed domains of this type of regulators can interact with each other, forming head-to-tail homodimers or homooligomers, and/or interact with SAM Pointed domains of another subfamily of ETS factors forming heterodimers. The oligomeric form is able to block transcription of target genesand is involved in MAPK signaling. They participate in regulation of different processes during embryo development including hematopoietic differentiation and eye development. Tel/Yan transcriptional factors are frequent targets of chromosomal translocations resulting in fusions of SAM domain with new neighboring genes. Such chimeric proteins were found in different tumors. Members of this subfamily are potential targets for cancer therapy.

>smart00251 SAM_PNT SAM / Pointed domain

Probab=100.00  E-value=4.2e-35  Score=178.93  Aligned_cols=71  Identities=54%  Similarity=1.058  Sum_probs=68.9

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE   73 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~   73 (78)
                      .||+||+.||++||.+||+|+++||+|+++++++|+|||++||.||++||++|+| .+||+||+||++||++
T Consensus        12 ~ip~dP~~Wt~~~V~~Wl~w~~~ef~L~~~~~~~f~m~G~~Lc~ls~edF~~~~p-~~GdiL~~hL~~Lk~~   82 (82)
T smart00251       12 GIPADPQLWTEDHVLEWLEWAVKEFSLSPIDFSKFDMSGKELCSMSKEEFLERAP-FGGDILWSHLQILRKA   82 (82)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHcCCHHHHHHHcC-CchHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999999999999999999999999 6999999999999974

A subfamily of the SAM domain

>cd08203 SAM_PNT Sterile alpha motif (SAM)/Pointed domain

Probab=100.00  E-value=5.7e-34  Score=167.65  Aligned_cols=66  Identities=53%  Similarity=1.077  Sum_probs=64.4

Q ss_pred             CccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHH
Q psy15116          6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQK   72 (78)
Q Consensus         6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~   72 (78)
                      ||..||++||.+||+|+++||+|+.+++++|+|||++||.||+|||.+|+|. +||+||+||++||+
T Consensus         1 dP~~Wt~~~V~~Wl~w~~~~f~L~~~~~~~F~m~G~~Lc~ls~edF~~~~p~-~GdiL~~hL~~l~~   66 (66)
T cd08203           1 DPRLWTKEHVLQWLEWAVKEFSLPPIDFSKFNMNGKELCLLTKEDFLRRAPS-GGDILYEHLQLLRK   66 (66)
T ss_pred             ChhhCCHHHHHHHHHHHHHhcCCCCCChhhcCCCHHHHHhCCHHHHHHHcCC-cHHHHHHHHHHHhC
Confidence            8999999999999999999999999999999999999999999999999997 99999999999985

Sterile alpha motif (SAM)/Pointed domain is found in about 40% of transcriptional regulators of ETS family (initially named for Erythroblastosis virus, E26-E Twenty Six). SAM Pointed domain containing proteins of this family additionally have C-terminal ETS DNA-binding domain. In a few cases, SAM Pointed domain appears as a single domain protein. Members of this group are mostly involved in regulation of embryonic development and growth control in eukaryotes. SAM Pointed domains mediate protein-protein interactions. Depending on the subgroup, they can interact with other SAM Pointed domains forming homo or hetero dimers/oligomers and/or they can recruit a protein kinase to its target which can be the SAM Pointed domain containing protein itself or another protein that has no kinase docking site. Thus, SAM Pointed domains participate in transcriptional regulation and signal transduction. Some genes coding ETS family transcripti

>PF02198 SAM_PNT: Sterile alpha motif (SAM)/Pointed domain; InterPro: IPR003118 Transcription factors are protein molecules that bind to specific DNA sequences in the genome, resulting in the induction or inhibition of gene transcription []

Probab=100.00  E-value=6.1e-34  Score=173.70  Aligned_cols=74  Identities=42%  Similarity=0.915  Sum_probs=66.1

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      +.+|+||..||++||.+||+|++++|+|+++++++|+|||++||.||+++|.+++|..+|++||+||++||+++
T Consensus        11 ~~~p~DP~~Wt~~~V~~Wl~w~~~~f~l~~~~~~~f~~~G~~Lc~lt~e~F~~~~~~~~G~~Ly~~L~~Lk~~~   84 (84)
T PF02198_consen   11 LWLPKDPRLWTKEDVLQWLRWVVREFDLPAIDFSRFNMNGRELCSLTKEDFRRRFPSGYGDILYSHLQLLKKCC   84 (84)
T ss_dssp             TTSCSSGGG--HHHHHHHHHHHHHHTT-SSCHGGGGTS-HHHHHHSHHHHHHHHSTHTTHHHHHHHHHHHHHH-
T ss_pred             hCCCCChhhCCHHHHHHHHHHHHHhcCCCcCchhccCCCHHHHHHcCHHHHHHHcCCCcHHHHHHHHHHHHHcc
Confidence            46899999999999999999999999999999999999999999999999999999559999999999999975

The ets oncogene is such a factor, possessing a region of 85-90 amino acids known as the ETS (erythroblast transformation specific) domain [, ]. This domain is rich in positively-charged and aromatic residues, and binds to purine-rich segments of DNA. The ETS domain IPR000418 from INTERPRO has been identified in other transcription factors such as PU.1, human erg, human elf-1, human elk-1, GA binding protein, and a number of others [, , ]. It is generally localized at the C terminus of the protein, with the exception of ELF-1, ELK-1, ELK-3, ELK-4 and ERF where it is found at the N terminus. This entry describes the highly conserved PNT (or Pointed) domain which is found within a subset of the ETs domain (IPR000418 from INTERPRO ), including mammalian Ets-1, Ets-2, Erg, Fli-1, GABPalpha, and Tel, as well as Drosophila Pnt-P2 and Yan. The PNT domain (IPR001660 from INTERPRO ) through a common tertiary arrangement of four alpha-helices. A role in protein-protein association has been established for the PNT domain [, ].; GO: 0043565 sequence-specific DNA binding, 0005634 nucleus; PDB: 1SXE_A 1SXD_A 2KMD_A 2JV3_A 2E8P_A 1SV4_B 1SV0_B 1LKY_F 1JI7_B 2DKX_A ....

>cd08536 SAM_PNT-Mae Sterile alpha motif (SAM)/Pointed domain of Mae protein homolog

Probab=100.00  E-value=1.8e-33  Score=165.90  Aligned_cols=64  Identities=42%  Similarity=0.847  Sum_probs=62.2

Q ss_pred             CccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHH
Q psy15116          6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEIL   70 (78)
Q Consensus         6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~l   70 (78)
                      ||+.||++||.+||.|+++||+|+++++++|+|||++||.||+|||++|+|. +|||||+||+..
T Consensus         1 DP~~Ws~~~V~~WL~w~~~ef~L~~~~~~~F~m~Gk~LC~ls~edF~~r~P~-~GdiL~~~lq~~   64 (66)
T cd08536           1 DPRSWSREHVRTWLRWVSARYQLEVVDLDKFLMNGKGLCLMSLEGFLYRVPV-GGKLLYEDFQRR   64 (66)
T ss_pred             CcccCCHHHHHHHHHHHHHHhCCCCCCccccCCCHHHHHcCCHHHHHhhcCC-ccHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999997 999999999863

Mae (Modulator of the Activity of ETS) subfamily represents a group of SAM Pointed monodomain proteins. SAM Pointed domain is a protein-protein interaction domain. It can interact with other SAM pointed domains forming head-to-tail heterodimers and also provides a kinase docking site. For example, in Drosophila Mae is required for facilitating phosphorylation of the Yan factor and for blocking phosphorylation of the ETS-2 regulator. Mae interacts with the SAM Pointed domains of Yan and ETS-2. Binding enhances access of the kinase to the Yan phosphorylation site by providing a kinase docking site, or inhibits phosphorylation of ETS-2 by blocking its docking site. This type of factors participates in regulation of kinase signaling particularly during embryogenesis.

>cd08538 SAM_PNT-ESE-2-like Sterile alpha motif (SAM)/Pointed domain of ESE-2 like ETS transcriptional regulators

Probab=99.98  E-value=1.2e-32  Score=166.85  Aligned_cols=71  Identities=25%  Similarity=0.578  Sum_probs=66.9

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCC--CCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEG--VTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~--~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      .-.||..||++||.+||.|+++||+|++  +++++|.|||++||+||+|||++++|+ +||+||++|+.+|.+.
T Consensus         3 ~~~dP~~Ws~~~V~~WL~Wav~ef~L~~~~i~~~~f~m~Gk~LC~ms~eeF~~~~p~-~GdvLy~~lq~~~~~~   75 (78)
T cd08538           3 TSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCSMTQEEFIEAAGI-CGEYLYFILQNIRTQG   75 (78)
T ss_pred             CCCCccccCHHHHHHHHHHHHHHcCCCccccchhhcCCCHHHHHcCCHHHHHHHccc-chHHHHHHHHHHHhcC
Confidence            3579999999999999999999999977  789999999999999999999999996 9999999999999764

SAM Pointed domain of ESE-2-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. ESE-2 factors are involved in regulation of gene expression in a variety of epithelial (glandular and secretory) cells. ESE-2 mRNA was found in skin keratinocytes, salivary gland, mammary gland, stomach, prostate, and kidneys. The DNA binding consensus motif for ESE-2 consists of a GGA core and AT-rich flanks. The expression profiles of these factors are altered in epithelial cancers. Members of this subfamily are potential targets for cancer therapy.

>cd08757 SAM_PNT_ESE Sterile alpha motif (SAM)/Pointed domain of ESE-like ETS transcriptional regulators

Probab=99.98  E-value=2.1e-32  Score=161.95  Aligned_cols=65  Identities=28%  Similarity=0.705  Sum_probs=61.9

Q ss_pred             CccccCHHHHHHHHHHHHHhcCCCC--CCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHH
Q psy15116          6 DPRQWSESNVAQWLCWAIREFSLEG--VTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQ   71 (78)
Q Consensus         6 DP~~Ws~~~V~~Wl~W~~~ef~L~~--~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk   71 (78)
                      ||+.||++||.+||+|+++||+|+.  +++++|+|||++||.||+|||++|+|+ +||+||+||+.++
T Consensus         1 dP~~Wt~~~V~~Wl~w~~~e~~l~~~~i~~~~F~m~Gk~LC~ms~edF~~~~p~-~GdiL~~~l~~~~   67 (68)
T cd08757           1 HPQYWTKNDVLEWLQFVAEQNKLDAECISFQKFNIDGQTLCSMTEEEFREAAGS-YGSLLYAELQRLT   67 (68)
T ss_pred             CHhhCCHHHHHHHHHHHHHHcCCCCCcCCccccCCCHHHHHcCCHHHHHHHcCC-cHHHHHHHHHHHh
Confidence            8999999999999999999988875  788999999999999999999999997 9999999999986

SAM Pointed domain of ESE-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. ETS factors are important for cell differentiation. They can be involved in regulation of gene expression in different types of epithelial cells. They are expressed in salivary gland, intestine, stomach, pancreas, lungs, kidneys, colon, mammary gland, and prostate. Members of this group are proto-oncogenes. Expression profiles of these factors are altered in epithelial cancers, which makes them potential targets for cancer therapy.

>cd08537 SAM_PNT-ESE-1-like Sterile alpha motif (SAM)/Pointed domain of ESE-1 like ETS transcriptional regulators

Probab=99.96  E-value=2e-30  Score=156.74  Aligned_cols=69  Identities=19%  Similarity=0.563  Sum_probs=66.4

Q ss_pred             CCCccccCHHHHHHHHHHHH--HhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116          4 LDDPRQWSESNVAQWLCWAI--REFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE   73 (78)
Q Consensus         4 P~DP~~Ws~~~V~~Wl~W~~--~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~   73 (78)
                      -.||+.||+.||.+||.|+.  +||++.++++++|.|||++||.|++|+|+.++|+ .||+||+||+.+|++
T Consensus         7 ~~~Pq~Wtk~qVleWL~~~~e~n~~dl~~v~f~~F~MnG~~LC~l~~e~F~~~a~p-~GdiLy~~L~~l~~~   77 (78)
T cd08537           7 GEEPQFWTKTQVLEWISYHVEKNKYDASSIDFSRCDMDGATLCNCALDQMRLVFGP-LGDQLYAQLRELTSS   77 (78)
T ss_pred             CCCcccccHHHHHHHHHHHHHhccCCcccCCHHHhCCchHHHHccCHHHHHHHcCC-hHHHHHHHHHHHhcc
Confidence            47999999999999999999  7899999999999999999999999999999998 999999999999975

SAM Pointed domain of ESE-1-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. SAM Pointed domain of ESE-1 provides a potential docking site for signaling kinase Pak1 in humans. ESE-1 factors are involved in regulation of gene expression in different types of epithelial cells. ESE-1 is expressed in many different organs including intestine, stomach, pancreas, lungs, kidneys, and prostate. The DNA binding consensus motif for ESE-1 consists of a purine-rich GGA[AT] core sequence. The expression profile of these factors is altered in epithelial cancers if compared to normal tissues. Members of this subfamily are potential targets for cancer therapy.

>cd08539 SAM_PNT-ESE-3-like Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators

Probab=99.96  E-value=4e-30  Score=154.37  Aligned_cols=69  Identities=23%  Similarity=0.507  Sum_probs=64.0

Q ss_pred             CCccccCHHHHHHHHHHH--HHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          5 DDPRQWSESNVAQWLCWA--IREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         5 ~DP~~Ws~~~V~~Wl~W~--~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      .||+.||++||.+||.|+  ++++++.++++++|.|||++||.|++|+|+.++| ++||+||+||+.||.+.
T Consensus         3 ~~P~~Wtk~~V~~WL~~~~~~~~~~~~~i~~~~F~MnG~~LC~ms~e~F~~~~p-~~GdiLy~~l~~~~~~~   73 (74)
T cd08539           3 IHPQYWTKYQVWEWLQHLLDTNQLDASCIPFQEFDINGEHLCSMSLQEFTRAAG-TAGQLLYSNLQHLKWNG   73 (74)
T ss_pred             CChhhCCHHHHHHHHHHHHHHcCCCcccccHHHcCCChHHHHccCHHHHhhcCC-chHHHHHHHHHHHhcCC
Confidence            699999999999999999  7788888889999999999999999999998888 59999999999999764

SAM Pointed domain of ESE-3-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. The ESE-3 transcriptional activator is involved in regulation of glandular epithelium differentiation through the MAP kinase signaling cascade. It is found to be expressed in glandular epithelium of prostate, pancreas, salivary gland, and trachea. Additionally, ESE-3 is differentially expressed during monocyte-derived dendritic cells development. DNA binding consensus motif for ESE-3 consists of purine-rich GGAA/T core sequence. The expression profiles of these factors are altered in epithelial cancers. Members of this subfamily are potential targets for cancer therapy.

>KOG3804|consensus

Probab=99.54  E-value=4.6e-15  Score=111.34  Aligned_cols=72  Identities=32%  Similarity=0.641  Sum_probs=67.4

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCC--CCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLE--GVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~--~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      .+..+|..|+++||.+|+.|+.++|+++  .++...|.|+|.+||.+|++||+.++|. .||+||++|+.+++..
T Consensus        57 ~l~~~p~~W~rd~v~~~l~~~~~~~sl~~~~~~~~~f~m~g~~L~~~te~d~~~r~~~-~gd~l~~~lq~~~~~~  130 (390)
T KOG3804|consen   57 TLSVEPSLWSRDDVLEWLSFAEAEFSLPANCIAFPRFDINGNALCSSTEEDFRVRAGT-LGDVLYNSLQEKKEQS  130 (390)
T ss_pred             ccccCcccccccchhHHHHHHHHhccCCcccccccccCCCcchhccccHHHhhhcCCC-ccchhhhhhhhhhccc
Confidence            4678999999999999999999999999  7888999999999999999999999996 9999999999998754

>KOG3805|consensus

Probab=97.82  E-value=3.7e-06  Score=62.35  Aligned_cols=69  Identities=19%  Similarity=0.206  Sum_probs=61.2

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCC----HHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMG----KESFLARAPPFMGDILWEHLEILQKE   73 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt----~edF~~~~p~~~GdiL~~hL~~lk~~   73 (78)
                      .+.||. |++.+|..|++|+.-|+-+++.-.+...+.+++.|.+.    .+.|.++.| .+|++|.+++...+.+
T Consensus       152 s~~D~~-ws~~~v~~~~~~T~~Q~~~PP~~vq~~~~~~~E~~~~~~t~~hp~f~~~~~-y~G~vLpa~~~i~~ss  224 (361)
T KOG3805|consen  152 SFEDHY-WSPFEVQAQLSTTELQSYLPPQLVQLYRLYLAENNHRLDTPMHPVFGNRSP-YGGTVLPAELPIYKSS  224 (361)
T ss_pred             cccccc-cCHHHHHHHHhhhhhhhcCCcHHHHHHHHHHHHhccccccccchhhccCCC-CCCcccccccccchhh
Confidence            467887 99999999999999999999876677789999999998    889999999 5999999999988843

>PF00536 SAM_1: SAM domain (Sterile alpha motif); InterPro: IPR021129 The sterile alpha motif (SAM) domain is a putative protein interaction module present in a wide variety of proteins [] involved in many biological processes

Probab=97.21  E-value=0.00054  Score=38.60  Aligned_cols=60  Identities=23%  Similarity=0.490  Sum_probs=40.1

Q ss_pred             cccCHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHH
Q psy15116          8 RQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQ   71 (78)
Q Consensus         8 ~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk   71 (78)
                      ..|+.++|.+||.=    .+++...  +..=.++|+.|+.||.+|+...--...|+  .+...++.||
T Consensus         1 s~W~~~~V~~WL~~----~~l~~y~~~F~~~~i~g~~L~~lt~~dL~~lgi~~~ghr~ki~~~i~~Lk   64 (64)
T PF00536_consen    1 SEWSVEDVSEWLKS----LGLEQYAENFEKNYIDGEDLLSLTEEDLEELGITKLGHRKKILRAIQKLK   64 (64)
T ss_dssp             GGTSHHHHHHHHHH----TTGGGGHHHHHHTTSSHHHHTTSCHHHHHHTT-SSHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH----CCCHHHHHHHHcCCchHHHHHhcCHHHHHHcCCCCHHHHHHHHHHHHHhC
Confidence            36999999999973    3443321  22226899999999999999854322363  4566666654

The SAM domain that spreads over around 70 residues is found in diverse eukaryotic organisms []. SAM domains have been shown to homo- and hetero-oligomerise, forming multiple self-association architectures and also binding to various non-SAM domain-containing proteins [], nevertheless with a low affinity constant []. SAM domains also appear to possess the ability to bind RNA []. Smaug, a protein that helps to establish a morphogen gradient in Drosophila embryos by repressing the translation of nanos (nos) mRNA, binds to the 3' untranslated region (UTR) of nos mRNA via two similar hairpin structures. The 3D crystal structure of the Smaug RNA-binding region shows a cluster of positively charged residues on the Smaug-SAM domain, which could be the RNA-binding surface. This electropositive potential is unique among all previously determined SAM-domain structures and is conserved among Smaug-SAM homologs. These results suggest that the SAM domain might have a primary role in RNA binding. Structural analyses show that the SAM domain is arranged in a small five-helix bundle with two large interfaces []. In the case of the SAM domain of EphB2, each of these interfaces is able to form dimers. The presence of these two distinct intermonomers binding surface suggest that SAM could form extended polymeric structures []. This entry represents type 1 SAM domains. ; PDB: 2KIV_A 3HIL_B 3KKA_A 3K1R_B 3SEN_B 3SEI_B 1V85_A 2KE7_A 2EAM_A 1WWV_A ....

>PF07647 SAM_2: SAM domain (Sterile alpha motif); InterPro: IPR011510 The sterile alpha motif (SAM) domain is a putative protein interaction module present in a wide variety of proteins [] involved in many biological processes

Probab=96.99  E-value=0.00082  Score=37.99  Aligned_cols=61  Identities=23%  Similarity=0.384  Sum_probs=40.4

Q ss_pred             ccccCHHHHHHHHHHHHHhcCCCC--CCCCCCCCCH-HHHhcCCHHHHhhhCCCCChH--HHHHHHHHHH
Q psy15116          7 PRQWSESNVAQWLCWAIREFSLEG--VTLHQFYMRG-KDICSMGKESFLARAPPFMGD--ILWEHLEILQ   71 (78)
Q Consensus         7 P~~Ws~~~V~~Wl~W~~~ef~L~~--~~~~~f~m~G-~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk   71 (78)
                      |..||.++|.+||.=.    +++.  -.+....++| ..|..||.+++...--...|+  .+...++.||
T Consensus         1 v~~w~~~~v~~WL~~~----gl~~y~~~f~~~~i~g~~~L~~l~~~~L~~lGI~~~~~r~kll~~i~~Lk   66 (66)
T PF07647_consen    1 VSTWSPEDVAEWLKSL----GLEQYADNFRENGIDGLEDLLQLTEEDLKELGITNLGHRRKLLSAIQELK   66 (66)
T ss_dssp             GGGHCHHHHHHHHHHT----TCGGGHHHHHHTTCSHHHHHTTSCHHHHHHTTTTHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHC----CcHHHHHHHHHcCCcHHHHHhhCCHHHHHHcCCCCHHHHHHHHHHHHHcC
Confidence            4689999999999822    4433  2245668999 999999999997443222332  3455554443

The SAM domain that spreads over around 70 residues is found in diverse eukaryotic organisms []. SAM domains have been shown to homo- and hetero-oligomerise, forming multiple self-association architectures and also binding to various non-SAM domain-containing proteins [], nevertheless with a low affinity constant []. SAM domains also appear to possess the ability to bind RNA []. Smaug, a protein that helps to establish a morphogen gradient in Drosophila embryos by repressing the translation of nanos (nos) mRNA, binds to the 3' untranslated region (UTR) of nos mRNA via two similar hairpin structures. The 3D crystal structure of the Smaug RNA-binding region shows a cluster of positively charged residues on the Smaug-SAM domain, which could be the RNA-binding surface. This electropositive potential is unique among all previously determined SAM-domain structures and is conserved among Smaug-SAM homologs. These results suggest that the SAM domain might have a primary role in RNA binding. Structural analyses show that the SAM domain is arranged in a small five-helix bundle with two large interfaces []. In the case of the SAM domain of EphB2, each of these interfaces is able to form dimers. The presence of these two distinct intermonomers binding surface suggest that SAM could form extended polymeric structures []. This entry represents a second domain related to the SAM domain. ; GO: 0005515 protein binding; PDB: 1B0X_A 1X9X_B 1OW5_A 1V38_A 3BS7_A 3BS5_A 3TAD_A 3TAC_B 2K60_A 2DL0_A ....

>cd00166 SAM Sterile alpha motif

Probab=96.45  E-value=0.0042  Score=34.06  Aligned_cols=48  Identities=21%  Similarity=0.381  Sum_probs=33.4

Q ss_pred             ccCHHHHHHHHHHHHHhcCCCC--CCCCCCCCCHHHHhcCCHHHHhhhCCCCCh
Q psy15116          9 QWSESNVAQWLCWAIREFSLEG--VTLHQFYMRGKDICSMGKESFLARAPPFMG   60 (78)
Q Consensus         9 ~Ws~~~V~~Wl~W~~~ef~L~~--~~~~~f~m~G~~LC~lt~edF~~~~p~~~G   60 (78)
                      .||.++|.+||.    +.+++.  ..+....++|..|+.||.+++...--...|
T Consensus         1 ~w~~~~V~~wL~----~~~~~~y~~~f~~~~i~g~~L~~l~~~dL~~lgi~~~g   50 (63)
T cd00166           1 NWSPEDVAEWLE----SLGLGQYADNFRENGIDGDLLLLLTEEDLKELGITLPG   50 (63)
T ss_pred             CCCHHHHHHHHH----HcChHHHHHHHHHcCCCHHHHhHCCHHHHHHcCCCCHH
Confidence            499999999996    233322  123344679999999999999855533235

; Widespread domain in signalling and nuclear proteins. In EPH-related tyrosine kinases, appears to mediate cell-cell initiated signal transduction via the binding of SH2-containing proteins to a conserved tyrosine that is phosphorylated. In many cases mediates homodimerization.

>KOG4375|consensus

Probab=95.77  E-value=0.0041  Score=45.22  Aligned_cols=50  Identities=24%  Similarity=0.454  Sum_probs=38.6

Q ss_pred             cccCHHHHHHHHHHHH-HhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCCh
Q psy15116          8 RQWSESNVAQWLCWAI-REFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMG   60 (78)
Q Consensus         8 ~~Ws~~~V~~Wl~W~~-~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~G   60 (78)
                      ..||+.||..||.|.- .||.   -.+..-+|||+-|=.++++||+.+-..+.|
T Consensus       208 ~~Wsk~DV~dWLssl~L~E~~---~aF~d~eIdG~hLp~l~k~df~~LGVTRVg  258 (272)
T KOG4375|consen  208 QRWSKIDVNDWLSSLHLIEYD---DAFHDIEIDGKHLPLLRKLDFRGLGVTRVG  258 (272)
T ss_pred             ceeccccHHHHHHhhhhhhcc---hhhhhcccccchhhhcchhhhhcccchhhh
Confidence            5799999999999762 2332   123455899999999999999988876555

>smart00454 SAM Sterile alpha motif

Probab=95.76  E-value=0.012  Score=32.45  Aligned_cols=61  Identities=21%  Similarity=0.320  Sum_probs=37.8

Q ss_pred             ccccCHHHHHHHHHHHHHhcCCCC--CCCCCCCCCHHHHhcCC-HHHHhhhCCCCCh--HHHHHHHHHHH
Q psy15116          7 PRQWSESNVAQWLCWAIREFSLEG--VTLHQFYMRGKDICSMG-KESFLARAPPFMG--DILWEHLEILQ   71 (78)
Q Consensus         7 P~~Ws~~~V~~Wl~W~~~ef~L~~--~~~~~f~m~G~~LC~lt-~edF~~~~p~~~G--diL~~hL~~lk   71 (78)
                      +..|+..+|.+||.-.    +++.  -.+..-.++|.+|+.++ .+++.+.--...|  ..+...++.||
T Consensus         1 ~~~w~~~~v~~wL~~~----g~~~y~~~f~~~~i~g~~ll~~~~~~~l~~lgi~~~~~r~~ll~~i~~l~   66 (68)
T smart00454        1 VSQWSPESVADWLESI----GLEQYADNFRKNGIDGALLLLLTSEEDLKELGITKLGHRKKILKAIQKLK   66 (68)
T ss_pred             CCCCCHHHHHHHHHHC----ChHHHHHHHHHCCCCHHHHHhcChHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence            4689999999999732    2222  12334479999999999 6665554322234  44455555544

Widespread domain in signalling and nuclear proteins. In EPH-related tyrosine kinases, appears to mediate cell-cell initiated signal transduction via the binding of SH2-containing proteins to a conserved tyrosine that is phosphorylated. In many cases mediates homodimerisation.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	78
2jv3_A	110	Ets-1 Pnt Domain (29-138) Nmr Structure Ensemble Le		4e-21
2kmd_A	113	Ras Signaling Requires Dynamic Properties Of Ets1 F		5e-21
1sxd_A	91	Solution Structure Of The Pointed (Pnt) Domain From		1e-11
1lky_B	77	Structure Of The Wild-Type Tel-Sam Polymer Length =		2e-09
2ytu_A	128	Solution Structure Of The Sam_pnt-Domain Of The Hum		4e-09
1sxe_A	97	The Solution Structure Of The Pointed (Pnt) Domain		4e-09
2qb0_B	241	Structure Of The 2tel Crystallization Module Fused		6e-09
2qar_B	93	Structure Of The 2tel Crystallization Module Fused		1e-08
2qb1_A	78	2tel Crystallization Module Length = 78		3e-08
1x66_A	98	Solution Structure Of The Sam_pnt-Domain Of The Hum		3e-08
1lky_A	77	Structure Of The Wild-Type Tel-Sam Polymer Length =		7e-08
2qb0_A	77	Structure Of The 2tel Crystallization Module Fused		8e-08
2qar_A	86	Structure Of The 2tel Crystallization Module Fused		1e-07
2dkx_A	96	Solution Structure Of The Sam_pnt-Domain Of Ets Tra		2e-07
1ji7_A	89	Crystal Structure Of Tel Sam Polymer Length = 89		4e-07
1sv0_A	85	Crystal Structure Of Yan-SamMAE-Sam Complex Length		5e-06

>pdb|2JV3|A Chain A, Ets-1 Pnt Domain (29-138) Nmr Structure Ensemble Length = 110

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)
Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 40  DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWE 99
Query: 66  HLEILQKE 73
           HLEILQKE
Sbjct: 100 HLEILQKE 107

>pdb|2KMD|A Chain A, Ras Signaling Requires Dynamic Properties Of Ets1 For Phosphorylation- Enhanced Binding To Co-Activator Cbp Length = 113

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)
Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 43  DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWE 102
Query: 66  HLEILQKE 73
           HLEILQKE
Sbjct: 103 HLEILQKE 110

>pdb|1SXD|A Chain A, Solution Structure Of The Pointed (Pnt) Domain From Mgabpa Length = 91

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP  WS   V  W+ W ++EFS+  + L    + G+++CS+ +E F  R P   G+ILW 
Sbjct: 22 DPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVP--RGEILWS 79
Query: 66 HLEILQKEYLV 76
          HLE+L+K  L 
Sbjct: 80 HLELLRKYVLA 90

>pdb|1LKY|B Chain B, Structure Of The Wild-Type Tel-Sam Polymer Length = 77

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 7  PRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEH 66
          P  WS  +VAQWL WA  EFSL  +  + F M GKD+  + KE F  R+ P  GD+L+E 
Sbjct: 12 PIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKDLLLLTKEDFRYRS-PHSGDVLYEL 70
Query: 67 LEILQKE 73
          L+ + K+
Sbjct: 71 LQHILKQ 77

>pdb|2YTU|A Chain A, Solution Structure Of The Sam_pnt-Domain Of The Human Friend Leukemiaintegration 1 Transcription Factor Length = 128

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILW 64
           DP  W++ +V QWL WAI+E+SL  +    F  M GK++C M KE FL     +  ++L 
Sbjct: 37  DPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLL 96
Query: 65  EHLEILQKEYLVIF 78
            HL  L++  L+ +
Sbjct: 97  SHLSYLRESSLLAY 110

>pdb|1SXE|A Chain A, The Solution Structure Of The Pointed (Pnt) Domain From The Transcrition Factor Erg Length = 97

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILW 64
          DP  WS  +V QWL WA++E+ L  V +  F  + GK++C M K+ F    P +  DIL 
Sbjct: 26 DPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILL 85
Query: 65 EHLEILQKEYL 75
           HL  L++  L
Sbjct: 86 SHLHYLRETPL 96

>pdb|2QB0|B Chain B, Structure Of The 2tel Crystallization Module Fused To T4 Lysozyme With An Ala-Gly-Pro Linker. Length = 241

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 7  PRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEH 66
          P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD+L+E 
Sbjct: 12 PIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDVLYEL 70
Query: 67 LEILQKE 73
          L+ + K+
Sbjct: 71 LQHILKQ 77

>pdb|2QAR|B Chain B, Structure Of The 2tel Crystallization Module Fused To T4 Lysozyme With A Helical Linker. Length = 93

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 7  PRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEH 66
          P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD+L+E 
Sbjct: 12 PIYWSRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDVLYEL 70
Query: 67 LEILQKE 73
          L+ + K+
Sbjct: 71 LQHILKQ 77

>pdb|2QB1|A Chain A, 2tel Crystallization Module Length = 78

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 7  PRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEH 66
          P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD+L+E 
Sbjct: 12 PIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDVLYEL 70
Query: 67 LE 68
          L+
Sbjct: 71 LQ 72

>pdb|1X66|A Chain A, Solution Structure Of The Sam_pnt-Domain Of The Human Friend Leukemiaintegration 1 Transcription Factor Length = 98

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILW 64
          DP  W++ +V QWL WAI+E+SL  +    F  M GK++C M KE FL     +  ++L 
Sbjct: 23 DPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLL 82
Query: 65 EHLEILQK 72
           HL  L++
Sbjct: 83 SHLSYLRE 90

>pdb|1LKY|A Chain A, Structure Of The Wild-Type Tel-Sam Polymer Length = 77

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 7  PRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEH 66
          P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD L+E 
Sbjct: 12 PIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDRLYEL 70
Query: 67 LEILQKE 73
          L+ + K+
Sbjct: 71 LQHILKQ 77

>pdb|2QB0|A Chain A, Structure Of The 2tel Crystallization Module Fused To T4 Lysozyme With An Ala-Gly-Pro Linker. Length = 77

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 7  PRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEH 66
          P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD L+E 
Sbjct: 12 PIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDELYEL 70
Query: 67 LEILQKE 73
          L+ + K+
Sbjct: 71 LQHILKQ 77

>pdb|2QAR|A Chain A, Structure Of The 2tel Crystallization Module Fused To T4 Lysozyme With A Helical Linker. Length = 86

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 7  PRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEH 66
          P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD L+E 
Sbjct: 13 PIYWSRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDELYEL 71
Query: 67 LEILQKE 73
          L+ + K+
Sbjct: 72 LQHILKQ 78

>pdb|2DKX|A Chain A, Solution Structure Of The Sam_pnt-Domain Of Ets Transcription Factor Pdef (Prostate Ets) Length = 96

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP  WS SNV +WL W   ++ L  +      + GK++C+M +E F  R+ P  GD+L  
Sbjct: 23 DPMDWSPSNVQKWLLWTEHQYRLPPMGKAFQELAGKELCAMSEEQFRQRS-PLGGDVLHA 81
Query: 66 HLEI 69
          HL+I
Sbjct: 82 HLDI 85

>pdb|1JI7|A Chain A, Crystal Structure Of Tel Sam Polymer Length = 89

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 7  PRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEH 66
          P  WS  +VAQWL WA  EFSL  +  + F   GK +  + KE F  R+ P  GD L+E 
Sbjct: 12 PIYWSRDDVAQWLKWAENEFSLRPIDSNTFEXNGKALLLLTKEDFRYRS-PHSGDELYEL 70
Query: 67 LEILQKE 73
          L+ + K+
Sbjct: 71 LQHILKQ 77

>pdb|1SV0|A Chain A, Crystal Structure Of Yan-SamMAE-Sam Complex Length = 85

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DPR WS  +V  +L + +REF L  +    F M GK +C + +  F  R  P  GD+L  
Sbjct: 9  DPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRC-PGAGDVLHN 67
Query: 66 HLEIL 70
           L++L
Sbjct: 68 VLQML 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	78
2jv3_A	110	ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, M	1e-29
1x66_A	98	Friend leukemia integration 1 transcription factor	2e-28
1sxe_A	97	Transcriptional regulator ERG; alpha helical, sign	3e-27
2ytu_A	128	Friend leukemia integration 1 transcription factor	4e-27
2dkx_A	96	SAM pointed domain-containing ETS transcription fa	5e-27
2qar_B	93	Telsam domain; polymer, crystallization modules, s	6e-27
1sxd_A	91	GA repeat binding protein, alpha; alpha helical, t	2e-26
1ji7_A	89	ETS-related protein TEL1; helical polymer, transcr	2e-26
1sv0_A	85	ETS DNA-binding protein pokkuri; alpha-helix, 3(10	9e-26
1sv0_C	82	Modulator of the activity of ETS CG15085-PA; alpha	6e-25
2qb0_B	241	Telsam domain - lysozyme chimera; helical polymer,	4e-20
2e8p_A	92	ELF3 protein; cell-free protein synthesis, protein	1e-19

>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A* Length = 110

 Score =  100 bits (250), Expect = 1e-29
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 5   DDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILW 64
            DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILW
Sbjct: 39  KDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILW 98

Query: 65  EHLEILQKE 73
           EHLEILQKE
Sbjct: 99  EHLEILQKE 107

>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 96.9 bits (241), Expect = 2e-28
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
          DP  W++ +V QWL WAI+E+SL  +    F  M GK++C M KE FL     +  ++L 
Sbjct: 23 DPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLL 82

Query: 65 EHLEILQKE 73
           HL  L++ 
Sbjct: 83 SHLSYLRES 91

>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1 Length = 97

 Score = 93.9 bits (233), Expect = 3e-27
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
          DP  WS  +V QWL WA++E+ L  V +  F  + GK++C M K+ F    P +  DIL 
Sbjct: 26 DPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILL 85

Query: 65 EHLEILQKEYL 75
           HL  L++  L
Sbjct: 86 SHLHYLRETPL 96

>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 128

 Score = 94.5 bits (234), Expect = 4e-27
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
           DP  W++ +V QWL WAI+E+SL  +    F  M GK++C M KE FL     +  ++L 
Sbjct: 37  DPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLL 96

Query: 65  EHLEILQKEYLV 76
            HL  L++  L+
Sbjct: 97  SHLSYLRESSLL 108

>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 96

 Score = 93.1 bits (231), Expect = 5e-27
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP  WS SNV +WL W   ++ L  +      + GK++C+M +E F  R+ P  GD+L  
Sbjct: 23 DPMDWSPSNVQKWLLWTEHQYRLPPMGKAFQELAGKELCAMSEEQFRQRS-PLGGDVLHA 81

Query: 66 HLEILQKEY 74
          HL+I +   
Sbjct: 82 HLDIWKSAA 90

>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli} Length = 93

 Score = 92.8 bits (230), Expect = 6e-27
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD+L+E
Sbjct: 11 QPIYWSRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDVLYE 69

Query: 66 HLEILQKEY 74
           L+ + K+ 
Sbjct: 70 LLQHILKQR 78

>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1 Length = 91

 Score = 91.5 bits (227), Expect = 2e-26
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP  WS   V  W+ W ++EFS+  + L    + G+++CS+ +E F  R P   G+ILW 
Sbjct: 22 DPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEILWS 79

Query: 66 HLEILQKEYLV 76
          HLE+L+K  L 
Sbjct: 80 HLELLRKYVLA 90

>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A Length = 89

 Score = 91.2 bits (226), Expect = 2e-26
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD L+E
Sbjct: 11 QPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDELYE 69

Query: 66 HLEILQKE 73
           L+ + K+
Sbjct: 70 LLQHILKQ 77

>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A Length = 85

 Score = 89.6 bits (222), Expect = 9e-26
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DPR WS  +V  +L + +REF L  +    F M GK +C + +  F  R P   GD+L  
Sbjct: 9  DPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRCPG-AGDVLHN 67

Query: 66 HLEILQKEY 74
           L++L  E 
Sbjct: 68 VLQMLIIES 76

>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 Length = 82

 Score = 87.6 bits (217), Expect = 6e-25
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 6  DPRQWSESNVAQWL--CWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDIL 63
          DPR W+ ++V +WL          +      +F M GK +C M  + +L R  P  G +L
Sbjct: 10 DPRDWTRADVWKWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRV-PVGGKML 68

Query: 64 WEHLEILQKEYL 75
          +    +     +
Sbjct: 69 YRDFRVRLARAM 80

>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli} Length = 241

 Score = 79.3 bits (194), Expect = 4e-20
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD+L+E
Sbjct: 11 QPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDVLYE 69

Query: 66 HLEILQKEY 74
           L+ + K+ 
Sbjct: 70 LLQHILKQA 78

>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 74.3 bits (182), Expect = 1e-19
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 6  DPRQWSESNVAQWLCWAIRE--FSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDIL 63
           P+ WS++ V  W+ + + +  +    +   +  M G  +C+   E       P  GD L
Sbjct: 23 QPQFWSKTQVLDWISYQVEKNKYDASAIDFSRCDMDGATLCNCALEELRLVFGPL-GDQL 81

Query: 64 WEHLEILQ 71
             L  L 
Sbjct: 82 HAQLRDLT 89

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	78
1sv0_A	85	ETS DNA-binding protein pokkuri; alpha-helix, 3(10	100.0
1sxe_A	97	Transcriptional regulator ERG; alpha helical, sign	100.0
1sxd_A	91	GA repeat binding protein, alpha; alpha helical, t	100.0
2jv3_A	110	ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, M	100.0
1x66_A	98	Friend leukemia integration 1 transcription factor	100.0
2dkx_A	96	SAM pointed domain-containing ETS transcription fa	100.0
2ytu_A	128	Friend leukemia integration 1 transcription factor	100.0
2e8p_A	92	ELF3 protein; cell-free protein synthesis, protein	100.0
1ji7_A	89	ETS-related protein TEL1; helical polymer, transcr	99.98
2qar_B	93	Telsam domain; polymer, crystallization modules, s	99.98
1sv0_C	82	Modulator of the activity of ETS CG15085-PA; alpha	99.97
2qb0_B	241	Telsam domain - lysozyme chimera; helical polymer,	99.96
1pk1_B	89	Sex COMB on midleg CG9495-PA; hetero SAM domain, p	98.73
2d8c_A	97	Phosphatidylcholine:ceramide cholinephosphotransfe	98.45
1wwu_A	99	Hypothetical protein FLJ21935; structural genomics	98.15
3bs7_A	78	Protein aveugle; sterIle alpha motif (SAM) domain,	98.14
2e8m_A	99	Epidermal growth factor receptor kinase substrate	98.04
1v85_A	91	Similar to ring finger protein 36; apoptosis, neur	97.97
3bs5_A	106	Protein aveugle; sterIle alpha motif, SAM domain,	97.88
2e8o_A	103	SAM domain and HD domain-containing protein 1; cel	97.8
3bq7_A	81	Diacylglycerol kinase delta; SAM domain, polymeriz	97.72
1kw4_A	89	Polyhomeotic; SAM domain, polycomb group, polymer,	97.7
1wwv_A	91	Connector enhancer of kinase suppressor of RAS 1;	97.56
3bs5_B	80	Connector enhancer of kinase suppressor of RAS 2;	97.53
2ean_A	83	Connector enhancer of kinase suppressor of RAS 2;	97.46
2gle_A	74	Neurabin-1; SAM domain, scaffold, protein protein	97.16
1uqv_A	85	STE50 protein; SAM, sterIle alpha motif, helical,	97.13
2eap_A	90	Lymphocyte cytosolic protein 2; cell-free protein	96.74
2f3n_A	76	SH3 and multiple ankyrin repeat domains 3; postsyn	96.66
2dkz_A	84	Hypothetical protein LOC64762; cell-free protein s	96.11
2k60_A	150	Protein (stromal interaction molecule 1); EF-hand,	95.01
2l5y_A	150	Stromal interaction molecule 2; EF-hand, SAM domai	94.09
3tad_C	265	Liprin-beta-1; protein binding; 2.90A {Mus musculu	91.49
2kso_A	82	Ephrin type-A receptor 2; SAM domain, heterodimer,	81.18

>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A

Probab=100.00  E-value=2.3e-36  Score=184.81  Aligned_cols=72  Identities=35%  Similarity=0.643  Sum_probs=69.8

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      -||+||..||++||.+||+|+++||+|++++++.|+|||++||.||+|||++++|. +||+||+||++||+++
T Consensus         5 ~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~F~m~G~~LC~ls~edF~~~~p~-~GdiL~~hL~~Lk~~~   76 (85)
T 1sv0_A            5 SLPSDPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRCPG-AGDVLHNVLQMLIIES   76 (85)
T ss_dssp             TSCSSGGGCCHHHHHHHHHHHHHHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHSTT-THHHHHHHHHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHccCCCCCChhhCCCCHHHHHcCCHHHHHHHcCC-chHHHHHHHHHHHHhh
Confidence            58999999999999999999999999999999999999999999999999999995 9999999999999975

>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1

Probab=100.00  E-value=2.2e-36  Score=188.73  Aligned_cols=75  Identities=37%  Similarity=0.774  Sum_probs=71.8

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcc
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYL   75 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~   75 (78)
                      +.||+||..||++||.+||+|+++||+|+++++++| +|||++||.||+|||++++|+++|||||+||++||++.+
T Consensus        21 l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~F~~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~Lk~~~~   96 (97)
T 1sxe_A           21 VIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLRETPL   96 (97)
T ss_dssp             SSSCSSTTSCCHHHHHHHHHHHHHHHTCSSCCGGGSTTCCHHHHTTCCHHHHTTTSCHHHHHHHHHHHHHHTTSCC
T ss_pred             hcCCcchhccCHHHHHHHHHHHHHhcCCCCCCHHhcCCCCHHHHHhCCHHHHHHHcCCCchHHHHHHHHHHHhCcC
Confidence            479999999999999999999999999999999999 899999999999999999987789999999999999865

>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1

Probab=100.00  E-value=8.7e-36  Score=184.19  Aligned_cols=73  Identities=38%  Similarity=0.915  Sum_probs=70.2

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcc
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYL   75 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~   75 (78)
                      +.||+||..||++||.+||+|++++|+|+++++++|+|||++||.||+|||++++|.  ||+||+||++||++++
T Consensus        17 l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v~~~~f~m~G~~LC~ls~edF~~~~p~--GdiL~~hL~~L~k~~~   89 (91)
T 1sxd_A           17 LGIPYDPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEILWSHLELLRKYVL   89 (91)
T ss_dssp             TTCCSSGGGCCHHHHHHHHHHHHHHTTCCCSCSGGGCSCHHHHHHSCHHHHHHHCTT--CHHHHHHHHHHHHTTT
T ss_pred             hCCCCChhhCCHHHHHHHHHHHHHccCCCCCChhhCCCCHHHHHcCCHHHHHHHCCC--chHHHHHHHHHHHhhc
Confidence            468999999999999999999999999999999999999999999999999999993  9999999999999876

>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*

Probab=100.00  E-value=1.1e-35  Score=189.08  Aligned_cols=74  Identities=57%  Similarity=1.124  Sum_probs=71.1

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      +.||+||+.||++||.+||+|+++||+|+++++++|+|||++||.||+|||++++|+++||+||+||++||+++
T Consensus        35 l~ip~DP~~WS~~~V~~WL~W~~~ef~L~~v~~~~F~m~G~~LC~ls~edF~~~~p~~~GdiL~~hL~~Lk~~~  108 (110)
T 2jv3_A           35 LGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWEHLEILQKED  108 (110)
T ss_dssp             TTCCSSSTTCCHHHHHHHHHHHHHHHTCCCCCTTTTCCCHHHHHHTHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred             hCCCCChHhCCHHHHHHHHHHHHHhcCCCCCChhcCCCCHHHHHhCCHHHHHHHcCCCcHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999999999999999999999999768999999999999975

>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=100.00  E-value=8.1e-36  Score=186.39  Aligned_cols=74  Identities=36%  Similarity=0.743  Sum_probs=70.8

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      +.||+||..||++||++||+|+++||+|+++++++| +|||++||.||+|||++++|+++|||||+||++||++.
T Consensus        18 l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v~~~~F~~m~G~~LC~ls~edF~~~~~~~~GdiL~~hL~~Lk~~~   92 (98)
T 1x66_A           18 VIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRESS   92 (98)
T ss_dssp             CCCCSSGGGCCTTHHHHHHHHHHHHTTCCSCCGGGGTTCCHHHHHHCCHHHHHTTSCHHHHHHHHHHHHHHHTCS
T ss_pred             cCCCCChhhcCHHHHHHHHHHHHHhcCCCCCChhhCCCCCHHHHHcCCHHHHHHHcCCCchHHHHHHHHHHHhcC
Confidence            479999999999999999999999999999999999 89999999999999999998778999999999999864

>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=100.00  E-value=3.8e-35  Score=182.80  Aligned_cols=73  Identities=34%  Similarity=0.704  Sum_probs=69.6

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      +.||+||+.||++||.+||+|+++||+|+++++.+|+|||++||.||+|||++++| .+||+||+||++||++.
T Consensus        18 l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~f~m~G~~LC~lskedF~~~~p-~~GdiL~~hL~~Lk~~~   90 (96)
T 2dkx_A           18 LNITADPMDWSPSNVQKWLLWTEHQYRLPPMGKAFQELAGKELCAMSEEQFRQRSP-LGGDVLHAHLDIWKSAA   90 (96)
T ss_dssp             TTCCSCGGGCCSSTHHHHHHHHHHHTTCCCCHHHHSSCCHHHHHHSCHHHHHHHCS-SSTHHHHHHHHHHHHHH
T ss_pred             cCCCCChhhCCHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHhCCHHHHHHHcC-cchHHHHHHHHHHHhcc
Confidence            36999999999999999999999999999999999999999999999999999999 49999999999999864

>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=100.00  E-value=2.6e-34  Score=186.88  Aligned_cols=73  Identities=37%  Similarity=0.762  Sum_probs=70.5

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE   73 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~   73 (78)
                      +.||+||..||++||++||+|+++||+|+++++++| +|||++||.||+|||++++|+++|||||+||++||++
T Consensus        32 l~IP~DP~~WS~~~V~~WL~Wa~~ef~L~~id~~~Fq~mnGk~LC~LskeDF~~~~p~~~GDiL~~hL~~Lr~~  105 (128)
T 2ytu_A           32 VIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRES  105 (128)
T ss_dssp             CSCCSCGGGCCTTHHHHHHHHHHHHTCCCSCCCGGGSSCCTTHHHHCCHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCcchhhCCHHHHHHHHHHHHHhcCCCCCChHhCCCCCHHHHHcCCHHHHHHHcCCCchHHHHHHHHHHHhc
Confidence            479999999999999999999999999999999999 8999999999999999999877899999999999998

>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=100.00  E-value=1.9e-33  Score=174.07  Aligned_cols=71  Identities=21%  Similarity=0.534  Sum_probs=66.5

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHh--cCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIRE--FSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE   73 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~e--f~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~   73 (78)
                      +.|.||+.||++||.+||+|++++  |+|.++++++|+|||++||+||+|||++++|+ +|||||+||++||++
T Consensus        19 w~~~dP~~Ws~~~V~~WL~Wavke~~~dl~~i~~~~f~m~G~~LC~mskedF~~~~p~-~GdiL~~hL~~L~~~   91 (92)
T 2e8p_A           19 WLGEQPQFWSKTQVLDWISYQVEKNKYDASAIDFSRCDMDGATLCNCALEELRLVFGP-LGDQLHAQLRDLTSS   91 (92)
T ss_dssp             TSSSCGGGCCHHHHHHHHHHHHHHTTCCCSSCCTTTCCCCSHHHHHSCHHHHHHHSGG-GHHHHHHHHHHHHHC
T ss_pred             ccCCChhhcCHHHHHHHHHHHHHHhCCCCCCCChhhcCCCHHHHHcCCHHHHHHHcCC-cHHHHHHHHHHHHhc
Confidence            578999999999999999999986  55578999999999999999999999999997 999999999999985

>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A

Probab=99.98  E-value=1.3e-32  Score=169.29  Aligned_cols=72  Identities=40%  Similarity=0.632  Sum_probs=68.6

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      .+|.||..||++||.+||+|+.+||+|+++++++|+|||++||.||+|||+.++|. +||+||+||++||++.
T Consensus         7 ~l~~DP~~WS~~~V~~WL~w~~~ef~L~~~~~~~f~mdGk~Lc~Ls~edF~~~~p~-~GdiL~~hL~~l~~~~   78 (89)
T 1ji7_A            7 HLRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSPH-SGDELYELLQHILKQR   78 (89)
T ss_dssp             GGCSCGGGCCHHHHHHHHHHHHHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHHCTT-THHHHHHHHHHHHHC-
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHhcCCCCCchhcCCCCHHHHHcCCHHHHHhHcCC-chHHHHHHHHHHHhCc
Confidence            48999999999999999999999999999999999999999999999999999996 7999999999999864

>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}

Probab=99.98  E-value=2.2e-32  Score=169.39  Aligned_cols=72  Identities=40%  Similarity=0.658  Sum_probs=68.8

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      .+|.||..||++||.+||+|+.++|+|+++++++|+|||++||.||+|||+.++|. +||+||+||++||+++
T Consensus         7 ~l~~DP~~WS~~~V~~WL~w~~~ef~L~~i~~~~f~mdGk~Lc~Lt~edF~~~~p~-~GdiL~~hL~~Lk~~~   78 (93)
T 2qar_B            7 HLRLQPIYWSRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRSPH-SGDVLYELLQHILKQR   78 (93)
T ss_dssp             GGCSCGGGCCHHHHHHHHHHHHHHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHCTT-THHHHHHHHHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHhcCCCCcchhcCCCCHHHHHcCCHHHHhhhCCc-chHHHHHHHHHHHHhc
Confidence            47889999999999999999999999999999999999999999999999999996 8999999999999865

>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1

Probab=99.97  E-value=7.1e-32  Score=163.53  Aligned_cols=70  Identities=27%  Similarity=0.514  Sum_probs=64.7

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCC--CCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHH
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSL--EGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQK   72 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L--~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~   72 (78)
                      .+|+||..||++||.+||+|+.++|++  +++++++|+|||++||.||+|||++++| .+||+||+||+.+-+
T Consensus         6 ~i~~dP~~Ws~~~V~~WL~w~~~e~~l~l~~~~~~~f~m~G~~Lc~ls~edF~~~~p-~~GdiL~~hL~~~l~   77 (82)
T 1sv0_C            6 GLPLDPRDWTRADVWKWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRVP-VGGKMLYRDFRVRLA   77 (82)
T ss_dssp             SSBSSGGGCCHHHHHHHHHHHHHHHTCCCCTHHHHTCCSCHHHHHHCCHHHHHHHCT-TTHHHHHHHHHHHHH
T ss_pred             cCCCChhhCCHHHHHHHHHHHHHHhCCCCCCCccccCCCCHHHHHhCCHHHHHhhCC-CchHHHHHHHHHHHH
Confidence            589999999999999999999999876  7788899999999999999999999999 699999999995443

>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli}

Probab=99.96  E-value=3e-30  Score=180.91  Aligned_cols=72  Identities=40%  Similarity=0.661  Sum_probs=68.4

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      -||.||++||++||.+||+|+++||+|+++++++|+|||++||+||+|||++++| ++||+||+||+.|++.+
T Consensus         7 ~~p~dP~~Wt~~~V~~Wl~w~~~~f~l~~~~~~~f~~~G~~Lc~m~~~~F~~~~p-~~G~iL~~hl~~l~k~~   78 (241)
T 2qb0_B            7 HLRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSP-HSGDVLYELLQHILKQA   78 (241)
T ss_dssp             GGGSCGGGCCHHHHHHHHHHHHHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHHCT-TTHHHHHHHHHHHHHTC
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHhcCCCCCCHHhcCCChHHHHHcCHHHHHhhcC-CcchhhHHHHHHHHHhh
Confidence            4899999999999999999999999999999999999999999999999999999 59999999999777654

>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A

Probab=98.73  E-value=9.1e-09  Score=62.54  Aligned_cols=71  Identities=13%  Similarity=0.250  Sum_probs=50.7

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHh
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKE   73 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~   73 (78)
                      +..+|..||.+||.+||+.....|+-..-.+....|||++|..||++|++..-.-..|.  .+|..++.||..
T Consensus        10 ~~~~v~~WsvedV~~wl~~~~~g~~~y~~~F~~~eIDG~aLL~Lt~~dl~~~mgiklGpalKi~~~I~~lk~~   82 (89)
T 1pk1_B           10 LRSQPIDWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNSERMMKYMGLKLGPALKICNLVNKVNGR   82 (89)
T ss_dssp             -CCCGGGCCHHHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHHTCCHHHHHHHSCCCHHHHHHHHHHHHHHC--
T ss_pred             CCCCchhCCHHHHHHHHHHHccchHHHHHHHHHcCcChHHHhcCCHHHHHHccCCCccHHHHHHHHHHHHHcc
Confidence            56899999999999999877433333222344567999999999999997755433564  567888877754

>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2

Probab=98.45  E-value=7.1e-07  Score=54.89  Aligned_cols=67  Identities=22%  Similarity=0.314  Sum_probs=48.2

Q ss_pred             CCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhh--hCCCCCh--HHHHHHHHHHHHhc
Q psy15116          4 LDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLA--RAPPFMG--DILWEHLEILQKEY   74 (78)
Q Consensus         4 P~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~--~~p~~~G--diL~~hL~~lk~~~   74 (78)
                      +.++..||.+||.+||+=.  .|+-..-.+.  +|+|+.|..||.+|+..  .--...|  ..|+..++.||+..
T Consensus        14 ~~~v~~Ws~edV~~WL~~~--Gl~~Y~~~F~--~IdG~~LL~Lt~~dLk~~~LgI~~~g~rkkl~~~I~~L~~~~   84 (97)
T 2d8c_A           14 MKEVVYWSPKKVADWLLEN--AMPEYCEPLE--HFTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEH   84 (97)
T ss_dssp             CSCCSSCCTTHHHHHHHHT--TCTTTTTTTT--TCCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHHHHHHHHHHS
T ss_pred             CCchhhCCHHHHHHHHHHc--CCHHHHHHHH--cCCCHHHhcCCHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5688999999999999722  2222112232  49999999999999987  3322234  77999999999865

>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}

Probab=98.15  E-value=3.9e-06  Score=52.09  Aligned_cols=58  Identities=21%  Similarity=0.315  Sum_probs=48.4

Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116         11 SESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE   73 (78)
Q Consensus        11 s~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~   73 (78)
                      |.++|.+||.  .+.|+=..+  ..| ..+|.+|..||++|+...|| .-|--||..|..-|+.
T Consensus        25 sp~EV~~WL~--~kgFS~~tv--~~Lg~ltGaqLf~Ltk~eL~~vCg-~EG~RlysqL~~qk~~   83 (99)
T 1wwu_A           25 GPDEVRAWLE--AKAFSPRIV--ENLGILTGPQLFSLNKEELKKVCG-EEGVRVYSQLTMQKAF   83 (99)
T ss_dssp             CHHHHHHHHH--HHTCCTTHH--HHTTSSCHHHHHTCCHHHHHHHHT-TTHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHH--HcCCCHHHH--HHHcCCCHHHHHcCCHHHHHHHCc-chhHHHHHHHHHHHHH
Confidence            8899999997  666665322  455 68999999999999999999 4899999999887764

>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}

Probab=98.14  E-value=2.6e-06  Score=49.52  Aligned_cols=68  Identities=15%  Similarity=0.260  Sum_probs=48.0

Q ss_pred             CccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHh
Q psy15116          6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKE   73 (78)
Q Consensus         6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~   73 (78)
                      ....||.++|.+||.-....++-..-.+..-.++|+.|+.||.+++...--...|+  .++..++.||..
T Consensus         2 ~v~~Wt~~~V~~WL~~~~~gl~~y~~~F~~~~I~G~~Ll~L~~~dL~~lGI~~~g~r~~il~~I~~Lr~~   71 (78)
T 3bs7_A            2 AVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQRLK   71 (78)
T ss_dssp             CGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHHhcCHHHHHHHHHHCCCCHHHHhhCCHHHHhHcCCCCHHHHHHHHHHHHHHHhH
Confidence            45689999999999865111221112233446999999999999998876544675  477888888764

>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.04  E-value=3.9e-06  Score=52.08  Aligned_cols=61  Identities=15%  Similarity=0.386  Sum_probs=48.1

Q ss_pred             CccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116          6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE   73 (78)
Q Consensus         6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~   73 (78)
                      +|.. |.++|.+||.  .+.|+-..  ...| ..+|.+|..||++|+...||  -|--||..|..-|..
T Consensus        31 ~~~S-sp~EV~~WL~--~kgFS~~t--v~~Lg~ltGaqLl~Ltk~eL~~vCg--EG~RlysqL~vqk~~   92 (99)
T 2e8m_A           31 TYDS-TPEDVKTWLQ--SKGFNPVT--VNSLGVLNGAQLFSLNKDELRTVCP--EGARVYSQITVQKAA   92 (99)
T ss_dssp             CTTC-CTTHHHHHHH--HHTCCHHH--HHHTSSSCHHHHHHCCHHHHHHHCT--THHHHHHHHHHHHHH
T ss_pred             CCCC-CHHHHHHHHH--HcCCCHHH--HHHHcCCCHHHHHcCCHHHHHHHCC--chHHHHHHHHHHHHH
Confidence            3444 7899999997  55565422  2445 68999999999999999999  599999999887764

>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=97.97  E-value=2.2e-06  Score=51.67  Aligned_cols=68  Identities=13%  Similarity=0.185  Sum_probs=47.0

Q ss_pred             cCCCccccCHHHHHHHHHHHH---HhcCCCCCCCCCCCCCHHHHhcCCHHHHhh--hCCCCChHH--HHHHHHHHHHh
Q psy15116          3 TLDDPRQWSESNVAQWLCWAI---REFSLEGVTLHQFYMRGKDICSMGKESFLA--RAPPFMGDI--LWEHLEILQKE   73 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~---~ef~L~~~~~~~f~m~G~~LC~lt~edF~~--~~p~~~Gdi--L~~hL~~lk~~   73 (78)
                      .+.++..||.++|.+||.-.-   .+|.   -.+..-.++|+.|+.||.+|+.+  .--...|+.  ++..++.||..
T Consensus        13 ~~~~v~~Wt~~dV~~WL~~~gl~~~~Y~---~~F~~~~IdG~~Ll~Lt~~dL~~~~LGI~~~g~r~~il~~I~~Lr~~   87 (91)
T 1v85_A           13 VHKAVDKWTTEEVVLWLEQLGPWASLYR---DRFLSERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILTELERVRSG   87 (91)
T ss_dssp             HHSCGGGCCHHHHHHHHHHHCGGGHHHH---HHHHHTTCCHHHHHHCCHHHHHSTTTCCCCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCcccCCHHHHHHHHHHcCCCHHHHH---HHHHHhCCCHHHHhcCCHHHHhccCCCCCCHHHHHHHHHHHHHHHhc
Confidence            457899999999999997431   1121   11222279999999999999986  433235644  77777877753

>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}

Probab=97.88  E-value=1.5e-05  Score=49.38  Aligned_cols=70  Identities=14%  Similarity=0.237  Sum_probs=48.8

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK   72 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~   72 (78)
                      .|.++..||.++|.+||.-....+.-..-.+..-.++|+.|..|+.+++.+.--...|+  .++..++.||.
T Consensus        19 ~~~~v~~Wt~~~V~~WL~~~~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dLk~LGI~~~GhR~kIl~~I~~Lr~   90 (106)
T 3bs5_A           19 RPKAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQRL   90 (106)
T ss_dssp             -CCCGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHHcchHHHHHHHHHcCccHHHHhhCCHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            47788999999999999855211211111233336999999999999998765434565  46888888875

>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.80  E-value=1.1e-05  Score=49.58  Aligned_cols=68  Identities=15%  Similarity=0.244  Sum_probs=49.3

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCC--C--CCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHhc
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEG--V--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKEY   74 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~--~--~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~~   74 (78)
                      .+.++..||.++|.+||.-.    ++..  .  .+..-.++|..|+.|+.+++.+.--...|+  .++..++.||+..
T Consensus        23 ~~~~v~~Ws~~~V~~WL~~l----gl~~~~y~~~F~~~~I~G~~Ll~Lt~~dLkeLGI~~~G~R~kil~~I~~Lr~~~   96 (103)
T 2e8o_A           23 LHPDYKTWGPEQVCSFLRRG----GFEEPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLSYIQRLVQIH   96 (103)
T ss_dssp             CCSCGGGCHHHHHHHHHHHH----TCCCHHHHHHHHHTTCCTTTTTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHTTT
T ss_pred             cccChhhCCHHHHHHHHHHc----CCChHHHHHHHHHcCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHHHHhH
Confidence            46789999999999999743    3432  1  122336999999999999998755433575  4778888888643

>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}

Probab=97.72  E-value=3.4e-05  Score=45.30  Aligned_cols=66  Identities=17%  Similarity=0.285  Sum_probs=45.3

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK   72 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~   72 (78)
                      -|.++..||.++|.+||.-.    +|+..  .+..-.++|..|+.||.+|+...--...|+  .+...++.|+.
T Consensus         3 ~~~~v~~Ws~~~V~~WL~~l----gl~~Y~~~F~~~~idg~~Ll~Lt~~dL~~lGI~~~ghr~kIl~aI~~L~~   72 (81)
T 3bq7_A            3 KTRPVHLWGTEEVAAWLEHL----SLCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGIKELSR   72 (81)
T ss_dssp             --CCGGGCCHHHHHHHHHHT----TCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHC
T ss_pred             CCCChhhCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHCcCCHHHHhHcCCCCHHHHHHHHHHHHHHHH
Confidence            47889999999999999733    34332  233447999999999999998754323464  45566666654

>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A

Probab=97.70  E-value=1.7e-05  Score=47.76  Aligned_cols=66  Identities=11%  Similarity=0.160  Sum_probs=43.4

Q ss_pred             CCccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHh
Q psy15116          5 DDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKE   73 (78)
Q Consensus         5 ~DP~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~   73 (78)
                      .++..||.++|.+||.-.   -+++..  .+..-.++|+.|..||.+|+........|  -.++..++.||..
T Consensus        12 ~~v~~Ws~edV~~wL~~l---~gl~~y~~~F~~~~IdG~~LL~Lt~~dL~k~lgIklG~r~kI~~~I~~L~~~   81 (89)
T 1kw4_A           12 PPISSWSVDDVSNFIREL---PGCQDYVDDFIQQEIDGQALLRLKEKHLVNAMGMKLGPALKIVAKVESIKEV   81 (89)
T ss_dssp             CCGGGCCHHHHHHHHHTS---TTCGGGHHHHHHTTCCHHHHHHCCHHHHHTTTCCCHHHHHHHHHHHHHHC--
T ss_pred             CCchhCCHHHHHHHHHHC---cChHHHHHHHHHhCccHHHHhcCCHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            478999999999999622   023221  12233699999999999999543332356  4577777777653

>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2

Probab=97.56  E-value=7.6e-05  Score=45.19  Aligned_cols=65  Identities=22%  Similarity=0.470  Sum_probs=47.6

Q ss_pred             CCCccccCHHHHHHHHHHH---HHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHh
Q psy15116          4 LDDPRQWSESNVAQWLCWA---IREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKE   73 (78)
Q Consensus         4 P~DP~~Ws~~~V~~Wl~W~---~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~   73 (78)
                      ......||+++|.+||+-.   ..+|     .+..-.++|++|..||.+|+.+.--...|  ..+.+-++.||+.
T Consensus         8 ~~~v~~Wt~~~V~~WL~~l~~~l~~Y-----~F~~~~I~G~~LL~Lt~~dL~~LGI~~~Ghr~~Il~~I~~L~~~   77 (91)
T 1wwv_A            8 MEPVETWTPGKVATWLRGLDDSLQDY-----PFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQLQAL   77 (91)
T ss_dssp             CCCTTTCCTTTHHHHHHHHCHHHHTS-----CHHHHCCCHHHHTTCCTTTGGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCccccCCHHHHHHHHHhcCCccccc-----cHHhcCccHHHHhhCCHHHHHHcCCCcHhHHHHHHHHHHHHHHH
Confidence            3567899999999999844   4556     23334689999999999998875433355  4577777777764

>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}

Probab=97.53  E-value=4.8e-05  Score=44.25  Aligned_cols=67  Identities=15%  Similarity=0.292  Sum_probs=44.7

Q ss_pred             CCccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHh
Q psy15116          5 DDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKE   73 (78)
Q Consensus         5 ~DP~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~   73 (78)
                      .....||.++|.+||.-..  -+++..  .+..-.++|..|..||.+|+.+.--...|+  .+...++.||+.
T Consensus         2 ~~v~~Ws~~~V~~WL~~l~--~gl~~Y~~~F~~~~i~G~~Ll~L~~~dL~~lGI~~~ghr~~il~~I~~L~~~   72 (80)
T 3bs5_B            2 EPVSKWSPSQVVDWMKGLD--DCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCAL   72 (80)
T ss_dssp             CCGGGCCHHHHHHHHHTSC--GGGGGGHHHHHHHTCCHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             CccccCCHHHHHHHHHHHh--hhHHHHHHHHHHcCCCHHHHHHCCHHHHHHcCCCCHHHHHHHHHHHHHHHHh
Confidence            3578999999999998210  012111  122226899999999999997754333564  567777777764

>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.46  E-value=5.9e-05  Score=44.27  Aligned_cols=65  Identities=15%  Similarity=0.380  Sum_probs=45.4

Q ss_pred             CCccccCHHHHHHHHHHHHHhc--CCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHh
Q psy15116          5 DDPRQWSESNVAQWLCWAIREF--SLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKE   73 (78)
Q Consensus         5 ~DP~~Ws~~~V~~Wl~W~~~ef--~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~   73 (78)
                      ..+..||.++|.+||.    ..  .++..  .+..-.++|..|..||.+|+.+.--...|  ..+...++.||+.
T Consensus         6 ~~v~~Wt~~~V~~WL~----~l~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dL~~LGI~~~ghr~~il~~I~~L~~~   76 (83)
T 2ean_A            6 SGVSKWSPSQVVDWMK----GLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCAL   76 (83)
T ss_dssp             CSGGGCCTTHHHHHHT----TSCGGGTTTHHHHHHHTCCHHHHTTCCHHHHHHHTCCCSHHHHHHHHHHHHHHHH
T ss_pred             CccccCCHHHHHHHHH----HHHhhHHHHHHHHHHCCCCHHHHhhCCHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence            5678999999999997    12  12221  12222689999999999999887533356  4567777777753

>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}

Probab=97.16  E-value=0.00011  Score=42.14  Aligned_cols=63  Identities=17%  Similarity=0.305  Sum_probs=42.7

Q ss_pred             CccccCHHHHHHHHHHHHHhcCCCC--CCCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116          6 DPRQWSESNVAQWLCWAIREFSLEG--VTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK   72 (78)
Q Consensus         6 DP~~Ws~~~V~~Wl~W~~~ef~L~~--~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~   72 (78)
                      ....||.++|.+||.-.    +++.  ..+..-.++|..|+.||.+|+...--...|+  .+...++.||.
T Consensus         3 ~v~~Ws~~~V~~WL~~~----gl~~y~~~F~~~~i~g~~Ll~l~~~dL~~lGI~~~g~r~kil~~i~~L~~   69 (74)
T 2gle_A            3 MVHEWSVQQVSHWLVGL----SLDQYVSEFSAQNISGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKM   69 (74)
T ss_dssp             CGGGCCSGGGHHHHHHT----TTHHHHHHHTTTTCCHHHHHTCCHHHHHTTTCCCHHHHHHHHHHHHSHHH
T ss_pred             CcccCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHhhCCHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            46789999999999743    2322  1233447899999999999976554323564  35566666664

>1uqv_A STE50 protein; SAM, sterIle alpha motif, helical, protein-protein interaction domain, growth arrest, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1z1v_A

Probab=97.13  E-value=0.0004  Score=41.90  Aligned_cols=70  Identities=13%  Similarity=0.153  Sum_probs=53.2

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCCCC--CCCC---CCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHhcc
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEGVT--LHQF---YMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKEYL   75 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f---~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~~~   75 (78)
                      .+.+-+.||.+||.+|+..   +-.+++.|  .++|   .|+|.-|-.|+.||..+++....|  --|-.-++.||.+.+
T Consensus         5 ~~~~v~~Wt~~~V~~W~~~---~lg~~d~d~~~~~f~~ndItG~vL~eL~leDlKEL~i~s~~~r~~lk~~In~Lr~~~l   81 (85)
T 1uqv_A            5 NNEDFSQWSVDDVITWCIS---TLEVEETDPLCQRLRENDIVGDLLPELCLQDCQDLCDGDLNKAIKFKILINKMRDSKL   81 (85)
T ss_dssp             SCCCTTTCCHHHHHHHHHH---HHSSCTTSTHHHHHHHSCCCGGGHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHCCS
T ss_pred             cccccccCCHHHHHHHHHH---HhCCCCccHHHHHHHHcCCchhhHHHcCHHHHHHhCchHHHHHHHHHHHHHHHHHhhc
Confidence            4677889999999998853   44455533  4566   699999999999999999987655  566777777776543

>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.74  E-value=0.00011  Score=44.70  Aligned_cols=47  Identities=9%  Similarity=0.330  Sum_probs=34.0

Q ss_pred             CccccCHHHHHHHHHHHHHhcCCCCCCC--CCCCCCHHHHhcCCHHHHhhhCCC
Q psy15116          6 DPRQWSESNVAQWLCWAIREFSLEGVTL--HQFYMRGKDICSMGKESFLARAPP   57 (78)
Q Consensus         6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~--~~f~m~G~~LC~lt~edF~~~~p~   57 (78)
                      +...||+++|..||+    +-++.+.+.  ....|||++|..||.+||+. .|.
T Consensus        18 eV~~Wsp~~VadWLk----k~g~~~cd~lv~Kh~IDG~~lL~LtE~Dlrk-~Pk   66 (90)
T 2eap_A           18 EVLGWDPDSLADYFK----KLNYKDCEKAVKKYHIDGARFLNLTENDIQK-FPK   66 (90)
T ss_dssp             HHTTCCTTTHHHHHH----HTTCHHHHHHHHHTTCCHHHHHTCCHHHHTT-SCT
T ss_pred             cccccCHHHHHHHHH----HcCCchHHHHHHHhccCchhhhcccHHHhcc-CCc
Confidence            457899999999995    222322222  25569999999999999984 454

>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A

Probab=96.66  E-value=0.00044  Score=40.00  Aligned_cols=60  Identities=22%  Similarity=0.369  Sum_probs=39.5

Q ss_pred             cccCHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHH
Q psy15116          8 RQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQ   71 (78)
Q Consensus         8 ~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk   71 (78)
                      ..||.++|.+||.-.    +++..-  +..-.++|..|+.||.+|+...--...|+  .+...++.|+
T Consensus         3 ~~Ws~~~V~~WL~~l----gl~~Y~~~F~~~~idg~~Ll~Lt~~dL~~lGI~~~Ghr~kIl~aI~~l~   66 (76)
T 2f3n_A            3 QLWSKFDVGDWLESI----HLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRENIERALRQLD   66 (76)
T ss_dssp             GGCCHHHHHHHHHHT----TCGGGHHHHHHTTCCGGGGGGCCHHHHHHTTCCCHHHHHHHHHHHHTC-
T ss_pred             hhCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHccCCHHHHHHcCCCChhHHHHHHHHHHHHH
Confidence            579999999999732    443321  23447999999999999997654333564  3444444444

>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.11  E-value=0.0017  Score=39.07  Aligned_cols=50  Identities=16%  Similarity=0.151  Sum_probs=37.6

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC---CCCHHHHhcCCHHHHhhhC
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF---YMRGKDICSMGKESFLARA   55 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f---~m~G~~LC~lt~edF~~~~   55 (78)
                      ..|+|-..||.++|..||+.    ..|+.--.+.|   .++|.-|+.|++|...+-.
T Consensus        10 ~pP~dLs~lSv~EVs~~Lr~----igL~e~vv~~F~~e~IDG~lL~~L~ee~L~edf   62 (84)
T 2dkz_A           10 QPPADLSGLSIEEVSKSLRF----IGLSEDVISFFVTEKIDGNLLVQLTEEILSEDF   62 (84)
T ss_dssp             CCCSCCSSCCHHHHHHHGGG----TCCCHHHHHHHHTTTCCHHHHHHCCHHHHHHTS
T ss_pred             CCchhhhhcCHHHHHHHHHH----cCCcHHHHHHHHHHccchHHHHhCCHHHHHhhc
Confidence            36999999999999999974    34432112344   5899999999999886544

>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}

Probab=95.01  E-value=0.0036  Score=41.15  Aligned_cols=68  Identities=18%  Similarity=0.279  Sum_probs=44.0

Q ss_pred             ccccCHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHH--HhhhCCCCChHHHHHHHHHHHHhccccC
Q psy15116          7 PRQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKES--FLARAPPFMGDILWEHLEILQKEYLVIF   78 (78)
Q Consensus         7 P~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~ed--F~~~~p~~~GdiL~~hL~~lk~~~~~~~   78 (78)
                      -..||.++|.+||....   +|+..-  +..-.++|++|-.|+.++  ++...-. -.+..+.+=-.||...+|+|
T Consensus        78 V~nWTvedV~~WL~~~v---~LpqY~~~Fr~~~I~G~~LprLa~~~~~~L~~~Lg-I~~~~hRqKl~lkald~vlF  149 (150)
T 2k60_A           78 VYNWTVDEVVQWLITYV---ELPQYEETFRKLQLSGHAMPRLAVTNTTMTGTVLK-MTDRSHRQKLQLKALDTVLF  149 (150)
T ss_dssp             HHHCCHHHHHHHHHHHH---CCTTHHHHHHHHCCSTTHHHHHSSCHHHHCSSCSC-SCHHHHHHHHHHHHHHHHHT
T ss_pred             cccCCHHHHHHHHHHcC---CcHHHHHHHHHcCCCHHHHHhhccccHHHHHHhcC-CCCHHHHHHHHHHHHhHHhc
Confidence            45799999999997644   355432  334479999999999986  6533221 23444444444566666665

>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}

Probab=94.09  E-value=0.0018  Score=42.59  Aligned_cols=69  Identities=16%  Similarity=0.329  Sum_probs=41.8

Q ss_pred             CCccccCHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHH--Hhh-hCCCCChHHHHHHHHHHHHhccccC
Q psy15116          5 DDPRQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKES--FLA-RAPPFMGDILWEHLEILQKEYLVIF   78 (78)
Q Consensus         5 ~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~ed--F~~-~~p~~~GdiL~~hL~~lk~~~~~~~   78 (78)
                      +.-..||.++|.+||...+   +|+..-  +..-.++|++|-.|+..+  ++. .-.. ........|. ||.-.+|+|
T Consensus        76 s~V~nWTvedV~~WL~~~v---~LpqY~~~Fr~~~IdG~~LprL~~~~~~~L~~~LGI-~~~~hR~Kl~-lkald~vlF  149 (150)
T 2l5y_A           76 SEVHNWTLEDTLQWLIEFV---ELPQYEKNFRDNNVKGTTLPRIAVHEPSFMISQLKI-SDRSHRQKLQ-LKALDVVLF  149 (150)
T ss_dssp             SHHHHCCHHHHHHHHHHHT---CCTTSHHHHHHHHCSSSTTTTCCSSSCCSTTTTSSC-CCHHHHHHHH-HHHHHHHHH
T ss_pred             CcchhCCHHHHHHHHHHcC---CcHHHHHHHHHcCCCHHHhhhhhhcchHHHHHHhCC-CCHHHHHHHH-HHHHHHHhc
Confidence            3346899999999997643   455532  234479999999999864  432 2221 2222233333 666666654

>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}

Probab=91.49  E-value=0.12  Score=36.62  Aligned_cols=62  Identities=16%  Similarity=0.285  Sum_probs=40.7

Q ss_pred             ccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCC-CCCh--HHHHHHHHHHHH
Q psy15116          7 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAP-PFMG--DILWEHLEILQK   72 (78)
Q Consensus         7 P~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p-~~~G--diL~~hL~~lk~   72 (78)
                      -..|+.++|.+||.    +..++..  .+....++|+.|..||.+|..+-.. ...|  ..|-..++.+++
T Consensus        15 ~~~W~~e~V~~WLe----~~GL~~Y~~~f~~n~~dG~~Ll~lt~~dLe~eLGI~nplHRkKL~laI~el~~   81 (265)
T 3tad_C           15 FAKWTKEQVCSWLA----EQGLGSYLSSGKHWIISGQTLLQASQQDLEKELGIKHSLHRKKLQLALQALGS   81 (265)
T ss_dssp             GGGSCHHHHHHHHH----HTTCCTTHHHHTTTCSCSHHHHHSCHHHHHHHTCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhCChHHHHHHHH----HHCHHHHHHHHHHhCCchHHHHhCCHHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence            36899999999997    2445432  2445679999999999999974443 2223  233444455443

>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}

Probab=81.18  E-value=2  Score=24.74  Aligned_cols=62  Identities=13%  Similarity=0.090  Sum_probs=35.3

Q ss_pred             ccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-HHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHH
Q psy15116          7 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG--DILWEHLEILQK   72 (78)
Q Consensus         7 P~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~-G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~   72 (78)
                      |..|+...|.+||.-    .+|...  .+..-.++ +..|+.||.+|....--...|  ..+...++.||.
T Consensus        11 ~~~~~~~~V~~WL~~----lgL~qY~~~F~~~gid~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~Lr~   77 (82)
T 2kso_A           11 VPRGSHMTVSEWLES----IKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGLKD   77 (82)
T ss_dssp             -------CHHHHHHH----TTCTTHHHHHHHTTCCSHHHHTTCCHHHHHHHHCCCTTHHHHHHHHHHHHHH
T ss_pred             CCCCCcchHHHHHHH----CCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence            566888999999973    234332  22333567 899999999999876422245  344566666664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	78
d2jv3a_	110	a.60.1.1 (A:) Ets-1 transcription factor pointed d	3e-29
d1ji7a_	77	a.60.1.1 (A:) Etv6 transcription factor pointed do	7e-29
d1sv0a_	77	a.60.1.1 (A:) Ets DNA-binding protein pokkuri (Yan	1e-28
d1sxda_	91	a.60.1.1 (A:) GABP-alpha subunit {Mouse (Mus muscu	2e-27
d1sxea_	97	a.60.1.1 (A:) Transcriptional regulator ERG {Human	5e-27
d1sv0c_	82	a.60.1.1 (C:) Modulator of the activity of Ets (MA	3e-24

>d1ji7a_ a.60.1.1 (A:) Etv6 transcription factor pointed domain (Tel SAM) {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: Etv6 transcription factor pointed domain (Tel SAM)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.0 bits (239), Expect = 7e-29
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD L+E
Sbjct: 11 QPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDELYE 69

Query: 66 HLEILQKE 73
           L+ + K+
Sbjct: 70 LLQHILKQ 77

>d1sv0a_ a.60.1.1 (A:) Ets DNA-binding protein pokkuri (Yan) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 77

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: Ets DNA-binding protein pokkuri (Yan)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 95.2 bits (237), Expect = 1e-28
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DPR WS  +V  +L + +REF L  +    F M GK +C + +  F  R P   GD+L  
Sbjct: 8  DPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRCPG-AGDVLHN 66

Query: 66 HLEILQKE 73
           L++L  E
Sbjct: 67 VLQMLIIE 74

>d1sxda_ a.60.1.1 (A:) GABP-alpha subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 91

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: GABP-alpha subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.9 bits (231), Expect = 2e-27
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP  WS   V  W+ W ++EFS+  + L    + G+++CS+ +E F  R P   G+ILW 
Sbjct: 22 DPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEILWS 79

Query: 66 HLEILQKEYLV 76
          HLE+L+K  L 
Sbjct: 80 HLELLRKYVLA 90

>d1sxea_ a.60.1.1 (A:) Transcriptional regulator ERG {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: Transcriptional regulator ERG
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.8 bits (228), Expect = 5e-27
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
          DP  WS  +V QWL WA++E+ L  V +  F  + GK++C M K+ F    P +  DIL 
Sbjct: 26 DPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILL 85

Query: 65 EHLEILQKEYL 75
           HL  L++  L
Sbjct: 86 SHLHYLRETPL 96

>d1sv0c_ a.60.1.1 (C:) Modulator of the activity of Ets (MAE, CG15085-PA) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 82

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: Modulator of the activity of Ets (MAE, CG15085-PA)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 84.5 bits (209), Expect = 3e-24
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 6  DPRQWSESNVAQWL--CWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDIL 63
          DPR W+ ++V +WL          +      +F M GK +C M  + +L R  P  G +L
Sbjct: 10 DPRDWTRADVWKWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRV-PVGGKML 68

Query: 64 WEHLEILQKEYL 75
          +    +     +
Sbjct: 69 YRDFRVRLARAM 80

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	78
d1sv0a_	77	Ets DNA-binding protein pokkuri (Yan) {Fruit fly (	100.0
d1sxda_	91	GABP-alpha subunit {Mouse (Mus musculus) [TaxId: 1	100.0
d1sxea_	97	Transcriptional regulator ERG {Human (Homo sapiens	100.0
d1ji7a_	77	Etv6 transcription factor pointed domain (Tel SAM)	100.0
d2jv3a_	110	Ets-1 transcription factor pointed domain {Mouse (	100.0
d1sv0c_	82	Modulator of the activity of Ets (MAE, CG15085-PA)	100.0
d1kw4a_	70	Polyhomeotic {Drosophila melanogaster [TaxId: 7227	98.06
d2d8ca1	85	Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculu	98.03
d1pk3a1	63	Polycomb protein Scm {Fruit fly (Drosophila melano	97.93
d1wwva1	78	Connector enhancer of kinase suppressor of Ras 1,	97.5
d2f3na1	64	Sh3 and multiple ankyrin repeat domains 3 (Shank3)	97.33
d1b4fa_	74	EphB2 receptor {Human (Homo sapiens) [TaxId: 9606]	90.5
d1z1va1	70	Ste50p, N-terminal domain {Baker's yeast (Saccharo	88.58
d1fw1a1	125	Class zeta GST {Human (Homo sapiens) [TaxId: 9606]	80.59

>d1sv0a_ a.60.1.1 (A:) Ets DNA-binding protein pokkuri (Yan) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: Ets DNA-binding protein pokkuri (Yan)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=6.4e-37  Score=182.83  Aligned_cols=72  Identities=35%  Similarity=0.643  Sum_probs=69.4

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      -||+||+.||++||.+||+|+++||+|+++++++|+|||++||.||++||++|+|. +||+||+||++|++..
T Consensus         4 ~ip~DP~~Wt~~~V~~Wl~w~~~ef~L~~i~~~~F~m~G~~LC~ls~~dF~~r~p~-~GdiL~~hL~~L~~~~   75 (77)
T d1sv0a_           4 SLPSDPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRCPG-AGDVLHNVLQMLIIES   75 (77)
T ss_dssp             TSCSSGGGCCHHHHHHHHHHHHHHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHSTT-THHHHHHHHHHHHHHH
T ss_pred             CCCCChhhcCHHHHHHHHHHHHHhcCCCCCCccccCCCHHHHHcCCHHHHHhHCCC-cHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999999999999999999999999996 8999999999999864

>d1sxda_ a.60.1.1 (A:) GABP-alpha subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: GABP-alpha subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-36  Score=186.81  Aligned_cols=73  Identities=38%  Similarity=0.899  Sum_probs=70.3

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhccc
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLV   76 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~   76 (78)
                      -||+||..||++||.+||+|+++||+|+++++++|+|||++||.||++||.+|+|  +|||||+||++||++++.
T Consensus        18 ~iP~DP~~WT~~~V~~WL~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~r~p--~GdiL~~hL~~Lk~~~~~   90 (91)
T d1sxda_          18 GIPYDPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVP--RGEILWSHLELLRKYVLA   90 (91)
T ss_dssp             TCCSSGGGCCHHHHHHHHHHHHHHTTCCCSCSGGGCSCHHHHHHSCHHHHHHHCT--TCHHHHHHHHHHHHTTTC
T ss_pred             CCCCChhhcCHHHHHHHHHHHHHHhCCCCCChhhcCCCHHHHHhCCHHHHHHHCC--ChhHHHHHHHHHHHHHhc
Confidence            4899999999999999999999999999999999999999999999999999999  499999999999999874

>d1sxea_ a.60.1.1 (A:) Transcriptional regulator ERG {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: Transcriptional regulator ERG
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-37  Score=188.86  Aligned_cols=75  Identities=37%  Similarity=0.774  Sum_probs=71.1

Q ss_pred             CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcc
Q psy15116          1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYL   75 (78)
Q Consensus         1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~   75 (78)
                      +.||+||+.||++||.+||+|+++||+|++++.+.| +|||++||.||++||++|+|.++||+||+||++||++.+
T Consensus        21 l~iP~DP~~Wt~~~V~~WL~W~~~ef~L~~i~~~~F~~m~G~~LC~lt~edF~~r~p~~~GdiL~~hL~~Lk~~~~   96 (97)
T d1sxea_          21 VIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLRETPL   96 (97)
T ss_dssp             SSSCSSTTSCCHHHHHHHHHHHHHHHTCSSCCGGGSTTCCHHHHTTCCHHHHTTTSCHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCCCChhhcCHHHHHHHHHHHHHHcCCCCCChhhcCCCCHHHHHhcCHHHHHHHcCCCchhHHHHHHHHHHHccC
Confidence            579999999999999999999999999999999999 699999999999999999996579999999999999764

>d1ji7a_ a.60.1.1 (A:) Etv6 transcription factor pointed domain (Tel SAM) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: Etv6 transcription factor pointed domain (Tel SAM)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-36  Score=178.47  Aligned_cols=70  Identities=41%  Similarity=0.674  Sum_probs=66.8

Q ss_pred             cCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116          3 TLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE   73 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~   73 (78)
                      +|.||+.||++||.+||+|+++||+|++++.+.|+|||++||.||++||++|+| .+||+||+||++||+.
T Consensus         8 l~~DP~~Wt~~~V~~WL~w~~~ef~L~~i~~~~F~m~G~~LC~lt~~dF~~r~p-~~GdiL~~hL~~L~~~   77 (77)
T d1ji7a_           8 LRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSP-HSGDELYELLQHILKQ   77 (77)
T ss_dssp             GCSCGGGCCHHHHHHHHHHHHHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHHCT-TTHHHHHHHHHHHHHC
T ss_pred             CCCChhhcCHHHHHHHHHHHHHHcCCCCCChhccCCCHHHHHcCCHHHHHhHCC-CcHHHHHHHHHHHHhC
Confidence            456999999999999999999999999999999999999999999999999999 5999999999999973

>d1sv0c_ a.60.1.1 (C:) Modulator of the activity of Ets (MAE, CG15085-PA) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Pointed domain
domain: Modulator of the activity of Ets (MAE, CG15085-PA)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.2e-33  Score=170.25  Aligned_cols=71  Identities=25%  Similarity=0.530  Sum_probs=67.2

Q ss_pred             cCCCccccCHHHHHHHHH--HHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116          3 TLDDPRQWSESNVAQWLC--WAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         3 vP~DP~~Ws~~~V~~Wl~--W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~   74 (78)
                      ||+||+.||++||.+||+  |+++||+|+++++++|+|||++||.||+|||++|+|. +||+||+||+.+....
T Consensus         7 ip~DP~~Wt~~~V~~WL~~~w~~~ef~l~~~~~~~F~m~G~~LC~ls~edF~~r~P~-~GdiL~~~L~~~l~~a   79 (82)
T d1sv0c_           7 LPLDPRDWTRADVWKWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRVPV-GGKMLYRDFRVRLARA   79 (82)
T ss_dssp             SBSSGGGCCHHHHHHHHHHHHHHHTCCCCTHHHHTCCSCHHHHHHCCHHHHHHHCTT-THHHHHHHHHHHHHHH
T ss_pred             CCcChHhCCHHHHHHHHHHHHHHcCCCCCCCChhhcCCCHHHHHcCCHHHHHhhCCC-chHHHHHHHHHHHHHH
Confidence            799999999999999998  9999999999999999999999999999999999994 8999999999876543

>d1kw4a_ a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaster [TaxId: 7227]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Polyhomeotic
species: Drosophila melanogaster [TaxId: 7227]

Probab=98.06  E-value=5.6e-06  Score=45.86  Aligned_cols=62  Identities=11%  Similarity=0.194  Sum_probs=40.5

Q ss_pred             CccccCHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHHHhhhCCCCChHH--HHHHHHHH
Q psy15116          6 DPRQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKESFLARAPPFMGDI--LWEHLEIL   70 (78)
Q Consensus         6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~edF~~~~p~~~Gdi--L~~hL~~l   70 (78)
                      .+..||.+||.+||.-.   -.+....  +..-.++|+.|+.||.+++........|+.  ++..++.|
T Consensus         4 pv~~Ws~~dV~~wL~~~---~~~~~y~~~F~~~~IdG~~Ll~Lt~~~L~~~~~~~~g~r~~i~~~I~~L   69 (70)
T d1kw4a_           4 PISSWSVDDVSNFIREL---PGCQDYVDDFIQQEIDGQALLRLKEKHLVNAMGMKLGPALKIVAKVESI   69 (70)
T ss_dssp             CGGGCCHHHHHHHHHTS---TTCGGGHHHHHHTTCCHHHHHHCCHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred             chhcCCHHHHHHHHHhC---CCcHHHHHHHHHcCccHHHHHHccHHHHHHHcCCchHHHHHHHHHHHHh
Confidence            46799999999999621   0122211  223379999999999999987654445643  34444444

>d2d8ca1 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Sphingomyelin synthase 1, SMS1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.03  E-value=1.2e-05  Score=46.67  Aligned_cols=66  Identities=23%  Similarity=0.368  Sum_probs=47.6

Q ss_pred             CCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhh--hC--CCCChHHHHHHHHHHHHhc
Q psy15116          4 LDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLA--RA--PPFMGDILWEHLEILQKEY   74 (78)
Q Consensus         4 P~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~--~~--p~~~GdiL~~hL~~lk~~~   74 (78)
                      ..+...||.+||.+||.-    .+++.. ...| .++|+.|..||.+|+..  ..  ...-...+..-++.||...
T Consensus         8 ~~~V~~Ws~~dV~~WL~~----~gl~~Y-~~~F~~IdG~~Ll~Lt~~dL~~~~Lgi~~~~~rk~il~~I~~Lk~~~   78 (85)
T d2d8ca1           8 MKEVVYWSPKKVADWLLE----NAMPEY-CEPLEHFTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEH   78 (85)
T ss_dssp             CSCCSSCCTTHHHHHHHH----TTCTTT-TTTTTTCCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHHHHHHHHHHS
T ss_pred             cCChhhCCHHHHHHHHHH----CcHHHH-HHHHHhccHHHHHHCCHHHHhhcCccCcChhHHHHHHHHHHHHHHHh
Confidence            458899999999999972    244432 1234 69999999999999976  32  2123467888888888643

>d1pk3a1 a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Polycomb protein Scm
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.93  E-value=1.4e-06  Score=47.66  Aligned_cols=53  Identities=15%  Similarity=0.290  Sum_probs=35.6

Q ss_pred             cCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHH
Q psy15116         10 WSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDI   62 (78)
Q Consensus        10 Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gdi   62 (78)
                      ||.+||.+||+-....++-..-.+..-.+||+.|+.||.++....-....|..
T Consensus         1 Ws~~dV~~wL~~~~~~~~~y~~~F~~~~IdG~~Ll~Lt~edL~~~~~~~~G~r   53 (63)
T d1pk3a1           1 WTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNSEMMMKYMGLKLGPA   53 (63)
T ss_dssp             CCHHHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHHCCCHHHH
T ss_pred             CCHHHHHHHHHHccccHHHHHHHHHHhCcCHHHHHhcCHHHHHHhcCCCchHH
Confidence            99999999997442112111112344479999999999999987543336754

>d1wwva1 a.60.1.2 (A:8-85) Connector enhancer of kinase suppressor of Ras 1, CNK1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Connector enhancer of kinase suppressor of Ras 1, CNK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=1.2e-05  Score=45.36  Aligned_cols=64  Identities=22%  Similarity=0.337  Sum_probs=44.8

Q ss_pred             ccccCHHHHHHHHHHH-HHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHh
Q psy15116          7 PRQWSESNVAQWLCWA-IREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKE   73 (78)
Q Consensus         7 P~~Ws~~~V~~Wl~W~-~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~   73 (78)
                      ...||.+||.+||.-. -.+|.   -.+..-.++|+.|+.||.+++...--...|  ..+...++.||..
T Consensus         4 v~~Wt~~~V~~WL~~~gl~~y~---~~F~~~~I~G~~Ll~L~~~dL~~lgI~~~ghr~~il~~i~~Lk~~   70 (78)
T d1wwva1           4 VETWTPGKVATWLRGLDDSLQD---YPFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQLQAL   70 (78)
T ss_dssp             TTTCCTTTHHHHHHHHCHHHHT---SCHHHHCCCHHHHTTCCTTTGGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCHHHHHHHHHHcchHHHH---HHHHHcCCCcHHHHHhhHHHHHHhCCCCHHHHHHHHHHHHHHHHh
Confidence            3689999999999743 22332   223444799999999999999876432355  4567777777653

>d2f3na1 a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat domains 3 (Shank3) {Rat(Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Sh3 and multiple ankyrin repeat domains 3 (Shank3)
species: Rat(Rattus norvegicus) [TaxId: 10116]

Probab=97.33  E-value=2.6e-05  Score=42.27  Aligned_cols=50  Identities=22%  Similarity=0.459  Sum_probs=35.1

Q ss_pred             cccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCChH
Q psy15116          8 RQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD   61 (78)
Q Consensus         8 ~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd   61 (78)
                      ..||.++|.+||.    ..+++..  .+....++|..|..||.+|+.+.--...|+
T Consensus         2 ~~Ws~~~V~~wL~----~~gl~~y~~~F~~~~i~g~~L~~l~~~dL~~lGi~~~g~   53 (64)
T d2f3na1           2 QLWSKFDVGDWLE----SIHLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGH   53 (64)
T ss_dssp             GGCCHHHHHHHHH----HTTCGGGHHHHHHTTCCGGGGGGCCHHHHHHTTCCCHHH
T ss_pred             CCCCHHHHHHHHH----HCCCHHHHHHHHHCCCcHHHhhcCCHHHHHHcCCCCHHH
Confidence            4799999999996    2234332  233447999999999999997654322454

>d1b4fa_ a.60.1.2 (A:) EphB2 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: EphB2 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.50  E-value=0.046  Score=29.58  Aligned_cols=63  Identities=14%  Similarity=0.245  Sum_probs=40.7

Q ss_pred             ccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCH-HHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHh
Q psy15116          7 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRG-KDICSMGKESFLARAPPFMGD--ILWEHLEILQKE   73 (78)
Q Consensus         7 P~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G-~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~   73 (78)
                      |-.|+...|.+||.=    .+|+..  .+..-.++| ..|+.++.++..+.--...|+  .+...++.||+.
T Consensus         1 Pd~~~~~~V~~WL~~----lgL~~Y~~~F~~~~idg~~~l~~l~~~~L~~lGI~~~ghr~ril~~i~~Lr~~   68 (74)
T d1b4fa_           1 PDYTSFNTVDEWLEA----IKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQVMRAQ   68 (74)
T ss_dssp             CCCCCCSSHHHHHHH----TTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccHHHHHHH----CCCHHHHHHHHHcCcCcHHHHHhCCHHHHHHcCCCChhHHHHHHHHHHHHHHH
Confidence            556676789999973    334332  223336888 667789999998764323564  677777777753

>d1z1va1 a.60.1.2 (A:33-102) Ste50p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Ste50p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.58  E-value=0.2  Score=27.50  Aligned_cols=49  Identities=16%  Similarity=0.295  Sum_probs=39.2

Q ss_pred             cccCHHHHHHHHHHHHHhcCCCCCCC--CCC---CCCHHHHhcCCHHHHhhhCCCCC
Q psy15116          8 RQWSESNVAQWLCWAIREFSLEGVTL--HQF---YMRGKDICSMGKESFLARAPPFM   59 (78)
Q Consensus         8 ~~Ws~~~V~~Wl~W~~~ef~L~~~~~--~~f---~m~G~~LC~lt~edF~~~~p~~~   59 (78)
                      ..||.++|.+|   +..+.+++.-++  +++   .|+|.-|-.+|.+|=.++++...
T Consensus         1 ~~Ws~deVv~w---c~~~L~l~~~d~l~~~lr~n~I~Gd~L~eLtL~DCKeLc~~d~   54 (70)
T d1z1va1           1 SQWSVDDVITW---CISTLEVEETDPLCQRLRENDIVGDLLPELCLQDCQDLCDGDL   54 (70)
T ss_dssp             CCCCHHHHHHH---HHHHHCCCTTSHHHHHHHHTTCCTTTGGGCCHHHHHHHTTSCH
T ss_pred             CcccHHHHHHH---HHHHhCCCCCChHHHHHHHcCCchhhhhHhhHHHHHHHcCchH
Confidence            37999999765   577888877553  344   69999999999999999998643

>d1fw1a1 a.45.1.1 (A:88-212) Class zeta GST {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: GST C-terminal domain-like
superfamily: GST C-terminal domain-like
family: Glutathione S-transferase (GST), C-terminal domain
domain: Class zeta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.59  E-value=0.55  Score=26.33  Aligned_cols=24  Identities=13%  Similarity=0.113  Sum_probs=20.4

Q ss_pred             CcCCCccccCHHHHHHHHHHHHHhcC
Q psy15116          2 YTLDDPRQWSESNVAQWLCWAIREFS   27 (78)
Q Consensus         2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~   27 (78)
                      ++|+||..  +..|++|+.|+..+..
T Consensus         1 LlP~dp~~--RA~v~~w~~~~~~~l~   24 (125)
T d1fw1a1           1 LLPQDPKK--RASVRMISDLIAGGIQ   24 (125)
T ss_dssp             SSCSSHHH--HHHHHHHHHHHHHHTG
T ss_pred             CCCCCHHH--HHHHHHHHHHHhhhhH
Confidence            57999986  8899999999987664