Psyllid ID: psy15157
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 344 | 2.2.26 [Sep-21-2011] | |||||||
| Q5R8K2 | 431 | Cleavage stimulation fact | yes | N/A | 0.936 | 0.747 | 0.486 | 7e-93 | |
| Q05048 | 431 | Cleavage stimulation fact | yes | N/A | 0.936 | 0.747 | 0.486 | 7e-93 | |
| Q5BJQ6 | 431 | Cleavage stimulation fact | yes | N/A | 0.936 | 0.747 | 0.483 | 4e-92 | |
| Q99LC2 | 431 | Cleavage stimulation fact | yes | N/A | 0.936 | 0.747 | 0.483 | 4e-92 | |
| Q8YRI1 | 1526 | Uncharacterized WD repeat | no | N/A | 0.587 | 0.132 | 0.270 | 4e-18 | |
| A8NEG8 | 434 | Nuclear distribution prot | N/A | N/A | 0.863 | 0.684 | 0.219 | 2e-17 | |
| Q17963 | 376 | WD repeat-containing prot | no | N/A | 0.546 | 0.5 | 0.267 | 3e-17 | |
| Q93847 | 395 | Uncharacterized WD repeat | no | N/A | 0.549 | 0.478 | 0.277 | 7e-17 | |
| Q00808 | 1356 | Vegetative incompatibilit | yes | N/A | 0.578 | 0.146 | 0.278 | 1e-16 | |
| Q23256 | 501 | Uncharacterized WD repeat | no | N/A | 0.656 | 0.451 | 0.251 | 2e-16 |
| >sp|Q5R8K2|CSTF1_PONAB Cleavage stimulation factor subunit 1 OS=Pongo abelii GN=CSTF1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 340 bits (873), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/358 (48%), Positives = 235/358 (65%), Gaps = 36/358 (10%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDD---TA 64
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
++ +IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 65 VQYAIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 L--------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
L Y+S +Y +GSKDG IK+WDGVS++C+ TF K
Sbjct: 243 LYDINTFQCFVSCNPQDQHADAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEK 302
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTV 340
AHDGAE+ S F++N KY+LSSGKDS+ KLWE+S+ R L+ YTGAG G+Q T V
Sbjct: 303 AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV 360
|
One of the multiple factors required for polyadenylation and 3'-end cleavage of mammalian pre-mRNAs. May be responsible for the interaction of CSTF with other factors to form a stable complex on the pre-mRNA. Pongo abelii (taxid: 9601) |
| >sp|Q05048|CSTF1_HUMAN Cleavage stimulation factor subunit 1 OS=Homo sapiens GN=CSTF1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 340 bits (873), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/358 (48%), Positives = 235/358 (65%), Gaps = 36/358 (10%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDD---TA 64
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
++ +IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 65 VQYAIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 L--------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
L Y+S +Y +GSKDG IK+WDGVS++C+ TF K
Sbjct: 243 LYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEK 302
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTV 340
AHDGAE+ S F++N KY+LSSGKDS+ KLWE+S+ R L+ YTGAG G+Q T V
Sbjct: 303 AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV 360
|
One of the multiple factors required for polyadenylation and 3'-end cleavage of mammalian pre-mRNAs. May be responsible for the interaction of CSTF with other factors to form a stable complex on the pre-mRNA. Homo sapiens (taxid: 9606) |
| >sp|Q5BJQ6|CSTF1_RAT Cleavage stimulation factor subunit 1 OS=Rattus norvegicus GN=Cstf1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 338 bits (867), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/358 (48%), Positives = 234/358 (65%), Gaps = 36/358 (10%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDD---TA 64
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
++ +IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 65 VQYAIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 L--------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
L Y+ +Y +GSKDG IK+WDGVS++C+ TF K
Sbjct: 243 LYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEK 302
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTV 340
AHDGAE+ S F++N KY+LSSGKDS+ KLWE+S+ R L+ YTGAG G+Q T V
Sbjct: 303 AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV 360
|
One of the multiple factors required for polyadenylation and 3'-end cleavage of mammalian pre-mRNAs. May be responsible for the interaction of CSTF with other factors to form a stable complex on the pre-mRNA. Rattus norvegicus (taxid: 10116) |
| >sp|Q99LC2|CSTF1_MOUSE Cleavage stimulation factor subunit 1 OS=Mus musculus GN=Cstf1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 338 bits (867), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/358 (48%), Positives = 234/358 (65%), Gaps = 36/358 (10%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDD---TA 64
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
++ +IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 65 VQYAIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 L--------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
L Y+ +Y +GSKDG IK+WDGVS++C+ TF K
Sbjct: 243 LYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEK 302
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTV 340
AHDGAE+ S F++N KY+LSSGKDS+ KLWE+S+ R L+ YTGAG G+Q T V
Sbjct: 303 AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV 360
|
One of the multiple factors required for polyadenylation and 3'-end cleavage of mammalian pre-mRNAs. May be responsible for the interaction of CSTF with other factors to form a stable complex on the pre-mRNA. Mus musculus (taxid: 10090) |
| >sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 57/259 (22%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR------------------------MLA 153
H S R+ FS DG + A+G D +++ D+ LA
Sbjct: 1073 HTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLA 1132
Query: 154 KSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS- 212
S + D + TL H V + F P LASGS D+TV+++D S S
Sbjct: 1133 NGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKC 1192
Query: 213 --VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250
+ + H +++V + F+P G + G+ +RL+
Sbjct: 1193 LYILQGH-----TSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNS 1247
Query: 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307
+ DG + SGS D +++WD SSKC+ TF + H ++S+ F +G L S D
Sbjct: 1248 VVFNPDGSMLASGSSDKTVRLWDISSSKCLHTF-QGHTNW-VNSVAFNPDGSMLASGSGD 1305
Query: 308 SLVKLWELSSARCLIAYTG 326
V+LWE+SS++CL + G
Sbjct: 1306 QTVRLWEISSSKCLHTFQG 1324
|
Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690) |
| >sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 150/378 (39%), Gaps = 81/378 (21%)
Query: 15 RRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRM 74
R+++ L++ ++ LY + H L+ S + P+ R + L+ K++
Sbjct: 7 RQKDDLHKAMLDYLYANNHTAAFNALKESAGITYTPDPTARYTGLLEKKWTSVIRLQKKI 66
Query: 75 EPSIGLNPI--QEILIGPGLDLEFESDVDPSAPEPAQYETAYV-TSHKSPCRAGAFSIDG 131
N +E+ + P ++D P AP A+V T H++P + AF
Sbjct: 67 MELENRNAALQEELSMSPARRAASQADWLPRAP------AAHVLTGHRAPLTSIAFHPQY 120
Query: 132 QLCATGSVDASIKILD-----VDRMLAKSSMESSEPQNDQQGHPVI-------------- 172
+ A+ S D ++KI D +R L + ++ D +GH ++
Sbjct: 121 SILASASEDTTVKIWDWETGEFERTLKGHTKPVNDLDFDHKGHLLVTCSSDLFIKIWDSQ 180
Query: 173 ------RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
+T H V+ + F P ++ S S+D+T+++FD + S + S +V
Sbjct: 181 NEWKNTKTFVGHDHAVSAVRFMPGDQLIVSASRDRTIRVFDVA--STHQVRTLSGHSEWV 238
Query: 227 RCLSFHPCGDYMVVGTDHFVLRLY------------------------------------ 250
RC+ G + G+ +RL+
Sbjct: 239 RCVIPSADGTMLASGSKDQTVRLWDPLTGEPKSELRGHENDVEAVAFAPISAYAAIRELA 298
Query: 251 -------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303
G SG++D +K+WD + + + + HD + +L F +GKYLLS
Sbjct: 299 GIPNDRTKRHGLFLASGARDKTVKLWDTQTGQMIRNLA-GHDNW-VRALAFHPSGKYLLS 356
Query: 304 SGKDSLVKLWELSSARCL 321
S D V++WELS+ RCL
Sbjct: 357 SSDDKTVRVWELSTGRCL 374
|
Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhances dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs. Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (taxid: 240176) |
| >sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 44/232 (18%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
H + FS G+ T S D ++KI ++D M+ + RTL
Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE------------------RTLTG 127
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H V + + + + S S DKT+K+F+ S + K K + +V C +F+P
Sbjct: 128 HKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK--GHNNYVFCCNFNPQSSL 185
Query: 238 MVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSS 274
+V G+ +R++ + DG + SGS DG ++IWD +
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG 245
Query: 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+C+ T + ++ + F+ NGKY+L+S DS +KLW+ S + L YTG
Sbjct: 246 QCIKTLVD-DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTG 296
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 98/234 (41%), Gaps = 45/234 (19%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL 175
+HK FS DG+ +GS D SIKI +D + K TL
Sbjct: 104 NAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEK-------------------TL 144
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
H + + + ++ S S DK VK+FD S K K + +V C F+P G
Sbjct: 145 MGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLK--GHTNYVFCCCFNPSG 202
Query: 236 DYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGV 272
+ G+ +R++ + DG SGS DG ++IWD
Sbjct: 203 TLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDST 262
Query: 273 SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ CV T + I+ + F+ NGKY+L+S ++ +KLW+ R L YTG
Sbjct: 263 TGTCVKTLID-EEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYTG 315
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPV 171
T + H S + AFS DGQ A+GS D +IKI D
Sbjct: 960 TQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDT------------------ASGTC 1001
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
+TL H V + F P +ASGS DKT+K++D + + + + +V+ + F
Sbjct: 1002 TQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEG--HGGWVQSVVF 1059
Query: 232 HPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKI 268
P G + G+D ++++ S DG+ SGS DG IKI
Sbjct: 1060 SPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKI 1119
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328
WD S C T + H G + S+ F+ +G+ + S D +K+W+ +S C G G
Sbjct: 1120 WDAASGTCTQTL-EGH-GGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHG 1177
Query: 329 SMGQ 332
Q
Sbjct: 1178 GWVQ 1181
|
Responsible for vegetative incompatibility through specific interactions with different alleles of the unlinked gene, het-c. Podospora anserina (taxid: 5145) |
| >sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2 OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 60/286 (20%)
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSA--------PEPAQYE-TAYVTSHKSPCRA 124
+ PSI P I + P D V P+ PE ++ ++ H
Sbjct: 164 IAPSITTKPTSTIQVAPPRD-----PVAPTTSSSGITKKPENGEFSLVKTISGHTKSVSV 218
Query: 125 GAFSIDGQLCATGSVDASIKILDV------------------------DRMLAKSSMESS 160
FS G+ TGS D IK+ + + +A +S +++
Sbjct: 219 IKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTT 278
Query: 161 EPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI 220
D +RT+ H V C F+P + ++AS D+TV+++D+
Sbjct: 279 VKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDF------------ 326
Query: 221 QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280
+ V+C+ H +D Y+ DG + S DG I++WD S C+ T
Sbjct: 327 KTGLCVKCIPAH---------SDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTL 377
Query: 281 SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
D A ++ + F+ NGKYLLS+ DS +KLW+ A+ L Y G
Sbjct: 378 VDT-DHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNG 422
|
Caenorhabditis elegans (taxid: 6239) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 344 | ||||||
| 380014280 | 432 | PREDICTED: cleavage stimulation factor s | 0.927 | 0.738 | 0.604 | 1e-118 | |
| 340727773 | 436 | PREDICTED: cleavage stimulation factor s | 0.936 | 0.738 | 0.595 | 1e-118 | |
| 350418179 | 436 | PREDICTED: cleavage stimulation factor s | 0.936 | 0.738 | 0.595 | 1e-118 | |
| 383849547 | 436 | PREDICTED: cleavage stimulation factor s | 0.936 | 0.738 | 0.595 | 1e-118 | |
| 340727775 | 432 | PREDICTED: cleavage stimulation factor s | 0.936 | 0.745 | 0.602 | 1e-118 | |
| 328776467 | 432 | PREDICTED: cleavage stimulation factor s | 0.927 | 0.738 | 0.601 | 1e-117 | |
| 332024470 | 437 | Cleavage stimulation factor 50 kDa subun | 0.933 | 0.734 | 0.595 | 1e-117 | |
| 307212759 | 436 | Cleavage stimulation factor 50 kDa subun | 0.936 | 0.738 | 0.595 | 1e-117 | |
| 156540954 | 434 | PREDICTED: cleavage stimulation factor s | 0.956 | 0.758 | 0.584 | 1e-117 | |
| 307189414 | 437 | Cleavage stimulation factor 50 kDa subun | 0.933 | 0.734 | 0.592 | 1e-117 |
| >gi|380014280|ref|XP_003691167.1| PREDICTED: cleavage stimulation factor subunit 1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/346 (60%), Positives = 254/346 (73%), Gaps = 27/346 (7%)
Query: 15 RRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRM 74
R +E LYRL+ISQL+YDGH +A+ L + PCPPSDRL L+ IGLAHEPDR K+
Sbjct: 9 RDRELLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGLAHEPDRSKKD 68
Query: 75 EPSIG-LNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
++ + +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS DGQL
Sbjct: 69 TSNLSSFTSTFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQL 128
Query: 134 CATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVTCLEFHP PI
Sbjct: 129 IATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFHPREPI 188
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL---- 249
L SGS+D ++K+FD+SK+SV+KA +TI ++ +RCLSFHP GD++VVGT+H V+RL
Sbjct: 189 LVSGSRDFSIKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHSVVRLYDVN 248
Query: 250 ----------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
YS D + Y S KDG IK+WDGVS++C+ TF KAHDG
Sbjct: 249 TAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGY 308
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
E+ S+TFTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 309 EVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 354
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340727773|ref|XP_003402210.1| PREDICTED: cleavage stimulation factor subunit 1-like isoform 1 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/349 (59%), Positives = 256/349 (73%), Gaps = 27/349 (7%)
Query: 12 EVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRM 71
+++ +E LYRL+ISQL+YDGH +A+ L + PCPPSDRL L+ IGLAHEPDR
Sbjct: 10 NIIKSRELLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGLAHEPDRS 69
Query: 72 KRMEPSIG-LNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSID 130
K+ ++ + +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS D
Sbjct: 70 KKDTSNLSSFTSTFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSAD 129
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
GQL ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVTCLEFHP
Sbjct: 130 GQLIATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFHPR 189
Query: 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL- 249
PIL SGS+D ++K+FD+SK+SV+KA +TI ++ +RCLSFHP GD++VVGT+H V+RL
Sbjct: 190 EPILVSGSRDFSIKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHPVVRLY 249
Query: 250 -------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284
YS D + Y S KDG IK+WDGVS++C+ TF KAH
Sbjct: 250 DVNTAQCFVCSIPNHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAH 309
Query: 285 DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
DG E+ S+TFTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 310 DGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 358
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350418179|ref|XP_003491774.1| PREDICTED: cleavage stimulation factor subunit 1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/349 (59%), Positives = 256/349 (73%), Gaps = 27/349 (7%)
Query: 12 EVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRM 71
+++ +E LYRL+ISQL+YDGH +A+ L + PCPPSDRL L+ IGLAHEPDR
Sbjct: 10 NIIKSRELLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGLAHEPDRS 69
Query: 72 KRMEPSIG-LNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSID 130
K+ ++ + +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS D
Sbjct: 70 KKDTSNLSSFTSTFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSAD 129
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
GQL ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVTCLEFHP
Sbjct: 130 GQLIATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFHPR 189
Query: 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL- 249
PIL SGS+D ++K+FD+SK+SV+KA +TI ++ +RCLSFHP GD++VVGT+H V+RL
Sbjct: 190 EPILVSGSRDFSIKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHPVVRLY 249
Query: 250 -------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284
YS D + Y S KDG IK+WDGVS++C+ TF KAH
Sbjct: 250 DVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAH 309
Query: 285 DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
DG E+ S+TFTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 310 DGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 358
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383849547|ref|XP_003700406.1| PREDICTED: cleavage stimulation factor subunit 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/349 (59%), Positives = 256/349 (73%), Gaps = 27/349 (7%)
Query: 12 EVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRM 71
+++ +E LYRL+ISQL+YDGH +A+ L + PCPPSDRL L+ IGLAHEPDR
Sbjct: 10 NIIKSRELLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGLAHEPDRS 69
Query: 72 KRMEPSIG-LNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSID 130
K+ ++ + +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS D
Sbjct: 70 KKDTTNLSTFASTFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSAD 129
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
GQL ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVTCLEFHP
Sbjct: 130 GQLIATGSVDASIKILDVDRMLAKSAPDEMTPGDQTGGHPVIRTLYDHLEEVTCLEFHPR 189
Query: 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL- 249
PIL SGS+D ++K+FD+SK+SV+KA +TI ++ +RCLSFHP GD++VVGT+H V+RL
Sbjct: 190 EPILVSGSRDFSIKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHPVVRLY 249
Query: 250 -------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284
YS D + Y S KDG IK+WDGVS++C+ TF KAH
Sbjct: 250 DVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAH 309
Query: 285 DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
DG E+ S+TFTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 310 DGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 358
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340727775|ref|XP_003402211.1| PREDICTED: cleavage stimulation factor subunit 1-like isoform 2 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/350 (60%), Positives = 257/350 (73%), Gaps = 28/350 (8%)
Query: 12 EVLRR-QEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDR 70
+V RR +E LYRL+ISQL+YDGH +A+ L + PCPPSDRL L+ IGLAHEPDR
Sbjct: 5 QVQRRGRELLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGLAHEPDR 64
Query: 71 MKRMEPSIG-LNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSI 129
K+ ++ + +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS
Sbjct: 65 SKKDTSNLSSFTSTFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSA 124
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189
DGQL ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVTCLEFHP
Sbjct: 125 DGQLIATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFHP 184
Query: 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL 249
PIL SGS+D ++K+FD+SK+SV+KA +TI ++ +RCLSFHP GD++VVGT+H V+RL
Sbjct: 185 REPILVSGSRDFSIKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHPVVRL 244
Query: 250 --------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA 283
YS D + Y S KDG IK+WDGVS++C+ TF KA
Sbjct: 245 YDVNTAQCFVCSIPNHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKA 304
Query: 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
HDG E+ S+TFTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 305 HDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 354
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328776467|ref|XP_393185.3| PREDICTED: cleavage stimulation factor subunit 1-like isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/346 (60%), Positives = 254/346 (73%), Gaps = 27/346 (7%)
Query: 15 RRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRM 74
+ +E LYRL+ISQL+YDGH +A+ L + PCPPSDRL L+ IGLAHEPDR K+
Sbjct: 9 KDRELLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGLAHEPDRSKKD 68
Query: 75 EPSIG-LNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
++ + +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS DGQL
Sbjct: 69 TSNLSSFTSTFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQL 128
Query: 134 CATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVTCLEFHP PI
Sbjct: 129 IATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFHPREPI 188
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL---- 249
L SGS+D ++K+FD+SK+SV+KA +TI ++ +RCLSFHP GD++VVGT+H V+RL
Sbjct: 189 LVSGSRDFSIKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHSVVRLYDVN 248
Query: 250 ----------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
YS D + Y S KDG IK+WDGVS++C+ TF KAHDG
Sbjct: 249 TAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGY 308
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
E+ S+TFTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 309 EVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 354
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332024470|gb|EGI64668.1| Cleavage stimulation factor 50 kDa subunit [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/351 (59%), Positives = 257/351 (73%), Gaps = 30/351 (8%)
Query: 12 EVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRM 71
+++ +E LYRL+ISQL+YDGH +A+ L + PCPPSDRL L+ IG AHEPDR
Sbjct: 10 NIIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQTDPPCPPSDRLLHLMLIGSAHEPDRS 69
Query: 72 KRMEPSIGLNPIQEIL---IGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFS 128
K+ + S L+ +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS
Sbjct: 70 KK-DNSTNLSSFTSSFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFS 128
Query: 129 IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
DGQL ATGSVDASIKILDVDRMLAKS+ E P + GHPVIRTLYDH+EEVTCLEFH
Sbjct: 129 ADGQLIATGSVDASIKILDVDRMLAKSAPEEIAPGDQTGGHPVIRTLYDHLEEVTCLEFH 188
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P PIL SGS+D +VK+FD+SK+SV+KA +TI ++ +RCLSFHP GD+++VGT+H ++R
Sbjct: 189 PREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPIVR 248
Query: 249 L--------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
L YS D + Y S KDG IK+WDGVS++CV TF+K
Sbjct: 249 LYDVNTAQCFVCSIPNHQHTAGITSIKYSPDAKTYVSAGKDGSIKLWDGVSNRCVNTFAK 308
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
AHDG E+ S+TFTRNGKY+LSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 309 AHDGYEVCSVTFTRNGKYILSSGKDSLIKLWELSTSRCLIAYTGAGTTGRQ 359
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307212759|gb|EFN88430.1| Cleavage stimulation factor 50 kDa subunit [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/349 (59%), Positives = 255/349 (73%), Gaps = 27/349 (7%)
Query: 12 EVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRM 71
+++ +E LYRLIISQL+YDGH +A+ L + PCPPSDRL L+ IG+AHEPDR
Sbjct: 10 NIIKSRELLYRLIISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGVAHEPDRS 69
Query: 72 KRMEPSIG-LNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSID 130
K+ + + +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS D
Sbjct: 70 KKDNNNASTFASSFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSAD 129
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
GQL ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVTCLEFHP
Sbjct: 130 GQLIATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFHPR 189
Query: 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL- 249
PIL SGS+D +VK+FD+SK+SV+KA +TI ++ +RCLSFHP GD+++VGT+H V+RL
Sbjct: 190 EPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLY 249
Query: 250 -------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284
YS D + Y S KDG IK+WDGVS++C+ TF KAH
Sbjct: 250 DVNTAQCFVCSIPNHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAH 309
Query: 285 DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
DG E+ S+TFTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 310 DGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 358
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156540954|ref|XP_001599178.1| PREDICTED: cleavage stimulation factor subunit 1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/356 (58%), Positives = 259/356 (72%), Gaps = 27/356 (7%)
Query: 4 QNEQKSSAEVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIG 63
++ + + +++ +E LYRL+ISQL+YDGH +A+ L + PCPPSDRL L+ IG
Sbjct: 2 KDSEVDTKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNLTQAEPPCPPSDRLLHLMLIG 61
Query: 64 LAHEPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCR 123
+A+EPDR K+ I E +GPGLDLEFE++ APEPAQYETAYVTSHK CR
Sbjct: 62 MANEPDRSKKENNHIPSFTAVENTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCR 121
Query: 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT 183
AGAFS DGQL ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVT
Sbjct: 122 AGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEV-PGDQSGGHPVIRTLYDHLEEVT 180
Query: 184 CLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD 243
CLEFHP PIL SGS+D ++K+FD+SK+SV+KA +TI +S +RCL+FHP GDY+VVGT+
Sbjct: 181 CLEFHPREPILVSGSRDFSIKLFDFSKASVKKAFRTITDSDQIRCLAFHPTGDYLVVGTN 240
Query: 244 HFVLRL--------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCV 277
H V+RL YS D + Y S SKDG IK+WDGVS++C+
Sbjct: 241 HPVVRLYDVNTAQCFVCSIPNHQHTSGITSIKYSPDAKTYASASKDGSIKLWDGVSNRCI 300
Query: 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
TF KAHDG ++ S+ FTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 301 NTFVKAHDGYQVCSVAFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 356
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307189414|gb|EFN73824.1| Cleavage stimulation factor 50 kDa subunit [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/351 (59%), Positives = 256/351 (72%), Gaps = 30/351 (8%)
Query: 12 EVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRM 71
+++ +E LYR++ISQL+YDGH +A+ L + PCPPSDRL L+ IG AHEPDR
Sbjct: 10 NMIKSREQLYRMMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGAAHEPDRS 69
Query: 72 KRMEPSIGLNPIQEIL---IGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFS 128
K+ + S L+ +GPGLDLEFE++ APEPAQYETAYVTSHK CRAGAFS
Sbjct: 70 KK-DNSNNLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFS 128
Query: 129 IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
DGQL ATGSVDASIKILDVDRMLAKS+ + P + GHPVIRTLYDH+EEVTCLEFH
Sbjct: 129 ADGQLIATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFH 188
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P PIL SGS+D +VK+FD+SK+SV+KA +TI ++ +RCLSFHP GD+++VGT+H V+R
Sbjct: 189 PREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVR 248
Query: 249 L--------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
L YS D + Y S KDG IK+WDGVS++C+ TF K
Sbjct: 249 LYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVK 308
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
AHDG E+ S+TFTRNGKYLLSSGKDSL+KLWELS++RCLIAYTGAG+ G+Q
Sbjct: 309 AHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQ 359
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 344 | ||||||
| FB|FBgn0039867 | 424 | CstF-50 "CstF-50" [Drosophila | 0.686 | 0.556 | 0.542 | 6.2e-91 | |
| UNIPROTKB|Q05048 | 431 | CSTF1 "Cleavage stimulation fa | 0.674 | 0.538 | 0.504 | 3.9e-89 | |
| MGI|MGI:1914587 | 431 | Cstf1 "cleavage stimulation fa | 0.674 | 0.538 | 0.504 | 1.3e-88 | |
| RGD|1309267 | 431 | Cstf1 "cleavage stimulation fa | 0.674 | 0.538 | 0.504 | 1.3e-88 | |
| WB|WBGene00000773 | 430 | cpf-1 [Caenorhabditis elegans | 0.712 | 0.569 | 0.480 | 3.5e-88 | |
| ZFIN|ZDB-GENE-030131-2958 | 431 | cstf1 "cleavage stimulation fa | 0.674 | 0.538 | 0.508 | 5e-87 | |
| DICTYBASE|DDB_G0278769 | 506 | cstf1 "cleavage stimulation fa | 0.404 | 0.274 | 0.471 | 1.9e-57 | |
| TAIR|locus:2173542 | 429 | AT5G60940 "AT5G60940" [Arabido | 0.558 | 0.447 | 0.371 | 1.3e-49 | |
| UNIPROTKB|G3N3E5 | 308 | WDR5 "WD repeat-containing pro | 0.220 | 0.246 | 0.389 | 5.5e-15 | |
| UNIPROTKB|Q2KIG2 | 334 | WDR5 "WD repeat-containing pro | 0.220 | 0.227 | 0.389 | 1.2e-14 |
| FB|FBgn0039867 CstF-50 "CstF-50" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 637 (229.3 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 134/247 (54%), Positives = 167/247 (67%)
Query: 4 QNEQKSSAEVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIG 63
++E + +++ +E LYRL+ISQL YDG A+ L S + C PS+RL ++ G
Sbjct: 2 RDEILDPSNLVKNREILYRLMISQLMYDGLEKFAMEL-SMLVKADQCAPSERLLHVMIAG 60
Query: 64 LAHEPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCR 123
+ D+ K ++L PG+DLEFE + APEP YETAYVTSHK CR
Sbjct: 61 MQTLSDKDKTNS--------DDVL--PGIDLEFEPEASALAPEPHSYETAYVTSHKQACR 110
Query: 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT 183
AGAFS DG L ATGSVDASIKILDV+RMLAKS+ E EP +QQGHPVIRTLYDH +EV+
Sbjct: 111 AGAFSCDGSLVATGSVDASIKILDVERMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVS 170
Query: 184 CLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD 243
LEFHP ILAS S+D TVK+FD +K SV+KAHK + V CLSFHP GDY+ +GT+
Sbjct: 171 YLEFHPKEHILASASRDGTVKLFDIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYVAIGTE 230
Query: 244 HFVLRLY 250
H VLR+Y
Sbjct: 231 HNVLRVY 237
|
|
| UNIPROTKB|Q05048 CSTF1 "Cleavage stimulation factor subunit 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 122/242 (50%), Positives = 167/242 (69%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQY 67
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
+IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 68 ---AIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 LY 250
LY
Sbjct: 243 LY 244
|
|
| MGI|MGI:1914587 Cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 122/242 (50%), Positives = 167/242 (69%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQY 67
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
+IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 68 ---AIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 LY 250
LY
Sbjct: 243 LY 244
|
|
| RGD|1309267 Cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 122/242 (50%), Positives = 167/242 (69%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A L + C PS++L L+ +G+ ++ ++
Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQY 67
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
+IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 68 ---AIGRS--DTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K IQE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 249 LY 250
LY
Sbjct: 243 LY 244
|
|
| WB|WBGene00000773 cpf-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 592 (213.5 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 123/256 (48%), Positives = 172/256 (67%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSS--CNVVEPCPPSDRLSQLVHIG--LAHEPD 69
++ +E +YRLII QL+YDGH +A+ L ++ C+ P PPSD+L +LV I +PD
Sbjct: 5 IKDREYMYRLIIGQLFYDGHQQIAVNLANTLGCSAPAP-PPSDKLFRLVTIAKQFVEDPD 63
Query: 70 RMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSI 129
K E S +P+Q + GLDLE+++DV P + EP++YET Y+T HK+PCRA AF+
Sbjct: 64 -YKAEEKS---SPMQFEPVSSGLDLEYDADVQPVSSEPSEYETIYLTVHKAPCRAAAFNS 119
Query: 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGH-PVIRTLYDHIEEVTCLEFH 188
DG L ATGS D SIKI+DV+R+LA+ +N H PVIRTLYDH+++V + FH
Sbjct: 120 DGSLVATGSADCSIKIMDVERILAREKEHREMNENGPDAHHPVIRTLYDHVDDVNTVIFH 179
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P IL SGS DKTVK+FD+SK++V+KA KT+ E VR LS HP G++++V TDH +R
Sbjct: 180 PRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVR 239
Query: 249 LYSSD-GRIYCSGSKD 263
LY+ + + Y S + D
Sbjct: 240 LYNIETAQAYASANPD 255
|
|
| ZFIN|ZDB-GENE-030131-2958 cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 610 (219.8 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 123/242 (50%), Positives = 167/242 (69%)
Query: 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKR 73
L+ ++ LY+LIISQL YDG+ +A +L S PS++L QL IG+ ++ ++
Sbjct: 8 LKDRQHLYKLIISQLLYDGYTNIANSLISEVKPQNVVSPSEQLMQLAKIGMENDDSAVQY 67
Query: 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQL 133
+IG + + G G+DLEF++DV +PE ++YET YVTSHK PCR +S DGQL
Sbjct: 68 ---AIGRS--DTVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL 122
Query: 134 CATGSVDASIKILDVDRMLAKSSME-----SSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188
ATGS DASIKILD +RMLAKS+M + Q + + HPVIRTLYDH++EVTCL FH
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNMENHPVIRTLYDHVDEVTCLSFH 182
Query: 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248
P+ ILASGS+D T+K+FDYSK S ++A K +QE+ +R +SFHP GD+++VGT H LR
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEMLRSISFHPSGDFLLVGTQHPTLR 242
Query: 249 LY 250
LY
Sbjct: 243 LY 244
|
|
| DICTYBASE|DDB_G0278769 cstf1 "cleavage stimulation factor 50 kDa subunit" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 365 (133.5 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 66/140 (47%), Positives = 99/140 (70%)
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPV 171
T ++T+HK+ CR FS DG+ ATGS D SIK+LDV++M + ++ ++ PV
Sbjct: 162 TKFITTHKNACRCAKFSWDGKYVATGSSDTSIKLLDVNKMRNYNQTKNETTEDSAPSRPV 221
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
IRT YDH + L+FHPSAPIL+S SKD T++ +DY KSS++++ K IQ++ +R ++F
Sbjct: 222 IRTFYDHTMPINDLDFHPSAPILSSASKDGTIRFYDY-KSSLKRSFKYIQDTHGIRSINF 280
Query: 232 HPCGDYMVVGTDHFVLRLYS 251
HPCGD ++ GTDH ++RLY+
Sbjct: 281 HPCGDLILAGTDHQMIRLYN 300
|
|
| TAIR|locus:2173542 AT5G60940 "AT5G60940" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 313 (115.2 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 75/202 (37%), Positives = 110/202 (54%)
Query: 52 PSDRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQ--EILIGPGLDLEFE-SDVDPSAPEPA 108
P +RL +LV GLA E + R S L P I ++F + S+
Sbjct: 53 PPNRLLELVAKGLAAENNGTLRGVSSSVLLPSSYGSITTPRTASIDFSVNHAKGSSKTIP 112
Query: 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQG 168
++E+ ++ HKS R FS DG ATG D SIK+ +V ++ M S D Q
Sbjct: 113 KHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKV---KQMISG----DTQA 165
Query: 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC 228
P+IRT YDH E + L+FHP + IL S +KD +K FD+SK++ ++A K Q++ VR
Sbjct: 166 RPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRS 225
Query: 229 LSFHPCGDYMVVGTDHFVLRLY 250
+SFHP G++++ GTDH + LY
Sbjct: 226 ISFHPSGEFLLAGTDHPIPHLY 247
|
|
| UNIPROTKB|G3N3E5 WDR5 "WD repeat-containing protein 5" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 158 (60.7 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 153 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 211
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 212 LKLWDYSKGKCLKTYTG 228
|
|
| UNIPROTKB|Q2KIG2 WDR5 "WD repeat-containing protein 5" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ DG + S S DG +IWD S +C+ T D +S + F+ NGKY+L++ D+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 310 VKLWELSSARCLIAYTG 326
+KLW+ S +CL YTG
Sbjct: 238 LKLWDYSKGKCLKTYTG 254
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q99LC2 | CSTF1_MOUSE | No assigned EC number | 0.4832 | 0.9360 | 0.7470 | yes | N/A |
| Q5BJQ6 | CSTF1_RAT | No assigned EC number | 0.4832 | 0.9360 | 0.7470 | yes | N/A |
| Q5R8K2 | CSTF1_PONAB | No assigned EC number | 0.4860 | 0.9360 | 0.7470 | yes | N/A |
| Q05048 | CSTF1_HUMAN | No assigned EC number | 0.4860 | 0.9360 | 0.7470 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 344 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-31 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-28 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-26 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-26 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 5e-21 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-16 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-07 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 3e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 6e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 9e-05 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 0.003 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 7e-31
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 47/209 (22%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL 175
H P R A S DG A+GS D +I++ D+ + +RTL
Sbjct: 48 KGHTGPVRDVAASADGTYLASGSSDKTIRLWDL------------------ETGECVRTL 89
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFD---YSKSSVRKAHKTIQESTFVRCLSFH 232
H V+ + F P IL+S S+DKT+K++D + + H + +V ++F
Sbjct: 90 TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGH-----TDWVNSVAFS 144
Query: 233 PCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSL 292
P DG S S+DG IK+WD + KCVAT H G E++S+
Sbjct: 145 P-------------------DGTFVASSSQDGTIKLWDLRTGKCVATL-TGHTG-EVNSV 183
Query: 293 TFTRNGKYLLSSGKDSLVKLWELSSARCL 321
F+ +G+ LLSS D +KLW+LS+ +CL
Sbjct: 184 AFSPDGEKLLSSSSDGTIKLWDLSTGKCL 212
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-28
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 47/219 (21%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP 170
+ H AFS DG+L ATGS D +IK+ D++
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE------------------ 42
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR---KAHKTIQESTFVR 227
++RTL H V + LASGS DKT++++D H + +V
Sbjct: 43 LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTS-----YVS 97
Query: 228 CLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
++F P DGRI S S+D IK+WD + KC+ T + H
Sbjct: 98 SVAFSP-------------------DGRILSSSSRDKTIKVWDVETGKCLTTL-RGHTDW 137
Query: 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
++S+ F+ +G ++ SS +D +KLW+L + +C+ TG
Sbjct: 138 -VNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG 175
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-26
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 43/200 (21%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL 175
H + AFS DG A+ S D +IK+ D+ + TL
Sbjct: 132 RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR------------------TGKCVATL 173
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST-FVRCLSFHPC 234
H EV + F P L S S D T+K++D S K T++ V ++F P
Sbjct: 174 TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTG---KCLGTLRGHENGVNSVAFSP- 229
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
DG + SGS+DG I++WD + +CV T S H + ++SL +
Sbjct: 230 ------------------DGYLLASGSEDGTIRVWDLRTGECVQTLS-GHTNS-VTSLAW 269
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ +GK L S D +++W+
Sbjct: 270 SPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-26
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP 170
+T H S + AFS DG++ ++ S D +IK+ DV E+ +
Sbjct: 85 CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV---------ETGKC-------- 127
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230
+ TL H + V + F P +AS S+D T+K++D + V ++
Sbjct: 128 -LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG--HTGEVNSVA 184
Query: 231 FHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290
F P DG S S DG IK+WD + KC+ T H+ ++
Sbjct: 185 FSP-------------------DGEKLLSSSSDGTIKLWDLSTGKCLGTLR-GHENG-VN 223
Query: 291 SLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
S+ F+ +G L S +D +++W+L + C+ +G
Sbjct: 224 SVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSG 259
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 93.2 bits (230), Expect = 5e-21
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185
+FS DG L A+GS D +I++ D+ ++RTL H V +
Sbjct: 248 SFSPDGSLLASGSSDGTIRLWDLR-----------------SSSSLLRTLSGHSSSVLSV 290
Query: 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG---- 241
F P +LASGS D TV+++D + + V LSF P G +V G
Sbjct: 291 AFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDD 350
Query: 242 ---------TDHFVLRL----------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
T + L +S DGR+ SGS DG +++WD + +
Sbjct: 351 GTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDG 410
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
++SL F+ +GK L S D+ ++LW+L +
Sbjct: 411 HTS--RVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 79.7 bits (195), Expect = 2e-16
Identities = 61/246 (24%), Positives = 94/246 (38%), Gaps = 53/246 (21%)
Query: 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQG 168
+ + H+ + AFS DG+L +GS D +IK+ D+D +
Sbjct: 55 DLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSK 114
Query: 169 HPV------------------------------IRTLYDHIEEVTCLEFHPSAPILASGS 198
+ IRTL H E VT L F P +LASGS
Sbjct: 115 LALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGS 174
Query: 199 -KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY 257
D T+K++D + V L+F P G ++
Sbjct: 175 SLDGTIKLWDLRTGKPLSTLAG--HTDPVSSLAFSPDGGLLIA----------------- 215
Query: 258 CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
SGS DG I++WD + K + + H + +SS F+ +G L S D ++LW+L S
Sbjct: 216 -SGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSS--FSPDGSLLASGSSDGTIRLWDLRS 272
Query: 318 ARCLIA 323
+ L+
Sbjct: 273 SSSLLR 278
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-07
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
++RTL H VT + F P +LASGS D TV+++D
Sbjct: 3 LLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 2e-07
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
+++TL H VT + F P LASGS D T+K++D
Sbjct: 4 LLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.5 bits (106), Expect = 3e-05
Identities = 41/194 (21%), Positives = 72/194 (37%), Gaps = 33/194 (17%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQND----- 165
++ H S + AFS DG+L A+GS D ++++ D++ SS+ +
Sbjct: 276 LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLS 335
Query: 166 -----------------------QQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKT 202
+ G P+ + V + F P +++SGS D T
Sbjct: 336 FSPDGSLLVSGGSDDGTIRLWDLRTGKPLK--TLEGHSNVLSVSFSPDGRVVSSGSTDGT 393
Query: 203 VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY-CSGS 261
V+++D S S+ + V L F P G + G+ +RL+ + S S
Sbjct: 394 VRLWDLSTGSLLRNLDGHTSR--VTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFS 451
Query: 262 KDGDIKIWDGVSSK 275
DG +
Sbjct: 452 PDGKVLASKSSDLS 465
|
Length = 466 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-05
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 273 SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
S + + T K H G ++S+ F+ +GKYL S D +KLW+
Sbjct: 1 SGELLKTL-KGHTGP-VTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 9e-05
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
K + T K H G ++S+ F+ +G L S D V++W
Sbjct: 2 KLLRTL-KGHTGP-VTSVAFSPDGNLLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.003
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 175 LYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
L H ++V + FHPSA +LAS D V ++D + KA + I +C S
Sbjct: 121 LQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG---KAVEVI------KCHS--- 168
Query: 234 CGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLT 293
D + + ++ DG + C+ SKD + I D V++ +AH A+
Sbjct: 169 --DQ-ITSLE------WNLDGSLLCTTSKDKKLNIIDPRDGTIVSS-VEAHASAKSQRCL 218
Query: 294 FTRNGKYLLSSGKDSL----VKLWE 314
+ + +++ G + LW+
Sbjct: 219 WAKRKDLIITLGCSKSQQRQIMLWD 243
|
Length = 493 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 344 | |||
| KOG0640|consensus | 430 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0275|consensus | 508 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0295|consensus | 406 | 99.98 | ||
| KOG0283|consensus | 712 | 99.97 | ||
| KOG0286|consensus | 343 | 99.97 | ||
| KOG0316|consensus | 307 | 99.97 | ||
| KOG0266|consensus | 456 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0296|consensus | 399 | 99.97 | ||
| KOG0645|consensus | 312 | 99.97 | ||
| KOG0286|consensus | 343 | 99.97 | ||
| KOG0285|consensus | 460 | 99.96 | ||
| KOG0645|consensus | 312 | 99.96 | ||
| KOG0315|consensus | 311 | 99.96 | ||
| KOG0266|consensus | 456 | 99.96 | ||
| KOG0318|consensus | 603 | 99.96 | ||
| KOG0284|consensus | 464 | 99.96 | ||
| KOG0291|consensus | 893 | 99.96 | ||
| KOG0282|consensus | 503 | 99.96 | ||
| KOG0265|consensus | 338 | 99.96 | ||
| KOG0295|consensus | 406 | 99.96 | ||
| KOG0273|consensus | 524 | 99.96 | ||
| KOG0281|consensus | 499 | 99.96 | ||
| KOG1446|consensus | 311 | 99.96 | ||
| KOG0292|consensus | 1202 | 99.96 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.96 | |
| KOG0284|consensus | 464 | 99.95 | ||
| KOG0319|consensus | 775 | 99.95 | ||
| KOG0318|consensus | 603 | 99.95 | ||
| KOG0281|consensus | 499 | 99.95 | ||
| KOG0265|consensus | 338 | 99.95 | ||
| KOG0643|consensus | 327 | 99.95 | ||
| KOG0282|consensus | 503 | 99.95 | ||
| KOG0291|consensus | 893 | 99.95 | ||
| KOG0316|consensus | 307 | 99.95 | ||
| KOG0276|consensus | 794 | 99.95 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.95 | |
| KOG0319|consensus | 775 | 99.94 | ||
| KOG0278|consensus | 334 | 99.94 | ||
| KOG0285|consensus | 460 | 99.94 | ||
| KOG0294|consensus | 362 | 99.94 | ||
| KOG1407|consensus | 313 | 99.94 | ||
| KOG0283|consensus | 712 | 99.94 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.94 | |
| KOG0973|consensus | 942 | 99.94 | ||
| KOG0293|consensus | 519 | 99.94 | ||
| KOG0772|consensus | 641 | 99.94 | ||
| KOG0313|consensus | 423 | 99.93 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.93 | |
| KOG0296|consensus | 399 | 99.93 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.93 | |
| KOG0288|consensus | 459 | 99.93 | ||
| KOG0310|consensus | 487 | 99.92 | ||
| KOG0306|consensus | 888 | 99.92 | ||
| KOG0277|consensus | 311 | 99.92 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.92 | |
| KOG0299|consensus | 479 | 99.92 | ||
| KOG0308|consensus | 735 | 99.92 | ||
| KOG0313|consensus | 423 | 99.92 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.92 | |
| KOG0647|consensus | 347 | 99.91 | ||
| KOG0289|consensus | 506 | 99.91 | ||
| KOG0641|consensus | 350 | 99.91 | ||
| KOG0646|consensus | 476 | 99.91 | ||
| KOG0289|consensus | 506 | 99.91 | ||
| KOG0306|consensus | 888 | 99.91 | ||
| KOG1332|consensus | 299 | 99.91 | ||
| KOG0264|consensus | 422 | 99.91 | ||
| KOG0308|consensus | 735 | 99.91 | ||
| KOG0277|consensus | 311 | 99.91 | ||
| KOG0292|consensus | 1202 | 99.91 | ||
| KOG0274|consensus | 537 | 99.91 | ||
| KOG0275|consensus | 508 | 99.91 | ||
| KOG0772|consensus | 641 | 99.91 | ||
| KOG0276|consensus | 794 | 99.91 | ||
| KOG0640|consensus | 430 | 99.9 | ||
| KOG0643|consensus | 327 | 99.9 | ||
| KOG0641|consensus | 350 | 99.9 | ||
| KOG1273|consensus | 405 | 99.9 | ||
| KOG0278|consensus | 334 | 99.9 | ||
| KOG0305|consensus | 484 | 99.9 | ||
| KOG1446|consensus | 311 | 99.89 | ||
| KOG2096|consensus | 420 | 99.89 | ||
| KOG0267|consensus | 825 | 99.89 | ||
| KOG1036|consensus | 323 | 99.89 | ||
| KOG0299|consensus | 479 | 99.89 | ||
| KOG0274|consensus | 537 | 99.89 | ||
| KOG0973|consensus | 942 | 99.89 | ||
| KOG0288|consensus | 459 | 99.88 | ||
| KOG0264|consensus | 422 | 99.88 | ||
| KOG0302|consensus | 440 | 99.88 | ||
| KOG0268|consensus | 433 | 99.88 | ||
| KOG1332|consensus | 299 | 99.88 | ||
| KOG2445|consensus | 361 | 99.88 | ||
| KOG0642|consensus | 577 | 99.87 | ||
| KOG0310|consensus | 487 | 99.87 | ||
| KOG1408|consensus | 1080 | 99.87 | ||
| KOG0269|consensus | 839 | 99.87 | ||
| KOG0300|consensus | 481 | 99.87 | ||
| KOG4283|consensus | 397 | 99.86 | ||
| KOG1274|consensus | 933 | 99.86 | ||
| KOG0305|consensus | 484 | 99.86 | ||
| KOG0302|consensus | 440 | 99.86 | ||
| KOG0269|consensus | 839 | 99.85 | ||
| KOG1407|consensus | 313 | 99.85 | ||
| KOG0300|consensus | 481 | 99.85 | ||
| KOG2048|consensus | 691 | 99.85 | ||
| KOG0301|consensus | 745 | 99.85 | ||
| KOG2055|consensus | 514 | 99.85 | ||
| KOG1539|consensus | 910 | 99.84 | ||
| KOG0301|consensus | 745 | 99.84 | ||
| KOG4328|consensus | 498 | 99.84 | ||
| KOG0268|consensus | 433 | 99.84 | ||
| KOG1009|consensus | 434 | 99.84 | ||
| KOG0267|consensus | 825 | 99.84 | ||
| KOG0303|consensus | 472 | 99.84 | ||
| KOG1034|consensus | 385 | 99.84 | ||
| KOG0646|consensus | 476 | 99.83 | ||
| KOG0321|consensus | 720 | 99.82 | ||
| KOG4283|consensus | 397 | 99.82 | ||
| KOG0639|consensus | 705 | 99.81 | ||
| KOG0294|consensus | 362 | 99.81 | ||
| KOG0270|consensus | 463 | 99.8 | ||
| KOG0647|consensus | 347 | 99.8 | ||
| KOG4328|consensus | 498 | 99.8 | ||
| KOG0771|consensus | 398 | 99.8 | ||
| KOG4378|consensus | 673 | 99.79 | ||
| KOG1063|consensus | 764 | 99.79 | ||
| KOG1036|consensus | 323 | 99.79 | ||
| KOG1408|consensus | 1080 | 99.79 | ||
| KOG1274|consensus | 933 | 99.79 | ||
| KOG0321|consensus | 720 | 99.78 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.78 | |
| KOG1445|consensus | 1012 | 99.78 | ||
| KOG0639|consensus | 705 | 99.78 | ||
| KOG1273|consensus | 405 | 99.78 | ||
| KOG2106|consensus | 626 | 99.77 | ||
| KOG0307|consensus | 1049 | 99.77 | ||
| KOG2048|consensus | 691 | 99.77 | ||
| KOG2106|consensus | 626 | 99.76 | ||
| KOG0644|consensus | 1113 | 99.76 | ||
| KOG1538|consensus | 1081 | 99.76 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.76 | |
| KOG1539|consensus | 910 | 99.75 | ||
| KOG1523|consensus | 361 | 99.75 | ||
| KOG1310|consensus | 758 | 99.75 | ||
| KOG2096|consensus | 420 | 99.75 | ||
| KOG0322|consensus | 323 | 99.74 | ||
| KOG4227|consensus | 609 | 99.74 | ||
| KOG1034|consensus | 385 | 99.74 | ||
| KOG1063|consensus | 764 | 99.74 | ||
| KOG0650|consensus | 733 | 99.73 | ||
| KOG0270|consensus | 463 | 99.73 | ||
| KOG0290|consensus | 364 | 99.72 | ||
| KOG0649|consensus | 325 | 99.72 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.72 | |
| KOG1538|consensus | 1081 | 99.71 | ||
| KOG1009|consensus | 434 | 99.71 | ||
| KOG2919|consensus | 406 | 99.71 | ||
| KOG0307|consensus | 1049 | 99.7 | ||
| KOG1188|consensus | 376 | 99.69 | ||
| KOG1007|consensus | 370 | 99.69 | ||
| KOG2919|consensus | 406 | 99.68 | ||
| KOG1007|consensus | 370 | 99.68 | ||
| KOG2055|consensus | 514 | 99.68 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.68 | |
| KOG1445|consensus | 1012 | 99.67 | ||
| KOG0303|consensus | 472 | 99.67 | ||
| KOG0649|consensus | 325 | 99.66 | ||
| KOG1240|consensus | 1431 | 99.65 | ||
| KOG1963|consensus | 792 | 99.64 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.61 | |
| KOG2394|consensus | 636 | 99.61 | ||
| KOG1188|consensus | 376 | 99.61 | ||
| KOG0642|consensus | 577 | 99.6 | ||
| KOG1587|consensus | 555 | 99.6 | ||
| KOG2110|consensus | 391 | 99.59 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.58 | |
| KOG4378|consensus | 673 | 99.57 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.57 | |
| KOG2110|consensus | 391 | 99.57 | ||
| KOG1524|consensus | 737 | 99.56 | ||
| KOG1334|consensus | 559 | 99.56 | ||
| KOG2111|consensus | 346 | 99.55 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.54 | |
| KOG1523|consensus | 361 | 99.54 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.53 | |
| KOG1240|consensus | 1431 | 99.53 | ||
| KOG0771|consensus | 398 | 99.52 | ||
| KOG1524|consensus | 737 | 99.52 | ||
| KOG0650|consensus | 733 | 99.52 | ||
| KOG1963|consensus | 792 | 99.5 | ||
| KOG1587|consensus | 555 | 99.5 | ||
| KOG3881|consensus | 412 | 99.5 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.5 | |
| KOG1272|consensus | 545 | 99.5 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.49 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.49 | |
| KOG2394|consensus | 636 | 99.49 | ||
| KOG1517|consensus | 1387 | 99.47 | ||
| KOG0290|consensus | 364 | 99.47 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.47 | |
| KOG4547|consensus | 541 | 99.46 | ||
| KOG2445|consensus | 361 | 99.45 | ||
| KOG1517|consensus | 1387 | 99.45 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.44 | |
| KOG2139|consensus | 445 | 99.44 | ||
| KOG1310|consensus | 758 | 99.42 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.42 | |
| KOG0974|consensus | 967 | 99.4 | ||
| KOG1354|consensus | 433 | 99.4 | ||
| KOG2321|consensus | 703 | 99.39 | ||
| KOG2139|consensus | 445 | 99.39 | ||
| KOG4497|consensus | 447 | 99.37 | ||
| KOG4190|consensus | 1034 | 99.35 | ||
| KOG0644|consensus | 1113 | 99.34 | ||
| KOG0322|consensus | 323 | 99.34 | ||
| KOG4227|consensus | 609 | 99.32 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.31 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.31 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.31 | |
| KOG2041|consensus | 1189 | 99.31 | ||
| KOG4497|consensus | 447 | 99.31 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.3 | |
| KOG2111|consensus | 346 | 99.3 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.29 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.28 | |
| KOG0974|consensus | 967 | 99.28 | ||
| KOG1272|consensus | 545 | 99.24 | ||
| KOG1409|consensus | 404 | 99.24 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.22 | |
| KOG3914|consensus | 390 | 99.22 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.2 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.18 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.18 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.14 | |
| KOG0280|consensus | 339 | 99.14 | ||
| KOG1064|consensus | 2439 | 99.13 | ||
| KOG4714|consensus | 319 | 99.13 | ||
| KOG0280|consensus | 339 | 99.12 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.11 | |
| KOG2695|consensus | 425 | 99.09 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.08 | |
| KOG2315|consensus | 566 | 99.05 | ||
| KOG4532|consensus | 344 | 99.02 | ||
| KOG3881|consensus | 412 | 99.01 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.0 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.99 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.99 | |
| KOG1064|consensus | 2439 | 98.99 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.97 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.96 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.96 | |
| KOG2321|consensus | 703 | 98.94 | ||
| KOG1354|consensus | 433 | 98.93 | ||
| KOG1409|consensus | 404 | 98.91 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.91 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.91 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.9 | |
| KOG1832|consensus | 1516 | 98.88 | ||
| KOG2314|consensus | 698 | 98.87 | ||
| KOG2066|consensus | 846 | 98.8 | ||
| KOG3914|consensus | 390 | 98.79 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.79 | |
| KOG4714|consensus | 319 | 98.78 | ||
| KOG0882|consensus | 558 | 98.77 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.73 | |
| KOG0882|consensus | 558 | 98.73 | ||
| KOG0309|consensus | 1081 | 98.72 | ||
| KOG4547|consensus | 541 | 98.71 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.7 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.68 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.68 | |
| KOG4532|consensus | 344 | 98.68 | ||
| KOG1334|consensus | 559 | 98.67 | ||
| KOG2315|consensus | 566 | 98.67 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.66 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.64 | |
| KOG1275|consensus | 1118 | 98.61 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.59 | |
| KOG2066|consensus | 846 | 98.58 | ||
| KOG1645|consensus | 463 | 98.55 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.54 | |
| KOG2695|consensus | 425 | 98.54 | ||
| KOG0309|consensus | 1081 | 98.49 | ||
| KOG2114|consensus | 933 | 98.49 | ||
| KOG1912|consensus | 1062 | 98.48 | ||
| KOG2041|consensus | 1189 | 98.45 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.45 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.45 | |
| KOG4190|consensus | 1034 | 98.41 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.4 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.36 | |
| KOG1912|consensus | 1062 | 98.34 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.33 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.31 | |
| KOG1008|consensus | 783 | 98.3 | ||
| KOG3621|consensus | 726 | 98.3 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.24 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.24 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.23 | |
| KOG3617|consensus | 1416 | 98.17 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.15 | |
| KOG1832|consensus | 1516 | 98.13 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.09 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.05 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 98.02 | |
| KOG1920|consensus | 1265 | 98.02 | ||
| KOG4640|consensus | 665 | 97.91 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.91 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.9 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 97.9 | |
| KOG2314|consensus | 698 | 97.88 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.87 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.87 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.86 | |
| KOG1645|consensus | 463 | 97.79 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.75 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.66 | |
| KOG1920|consensus | 1265 | 97.64 | ||
| KOG4649|consensus | 354 | 97.64 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.64 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.62 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.58 | |
| KOG3621|consensus | 726 | 97.55 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.55 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.54 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 97.53 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.53 | |
| KOG4441|consensus | 571 | 97.51 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.44 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.41 | |
| KOG4640|consensus | 665 | 97.41 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.4 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.33 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.32 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.31 | |
| KOG1275|consensus | 1118 | 97.27 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 97.27 | |
| KOG3617|consensus | 1416 | 97.24 | ||
| KOG4649|consensus | 354 | 97.23 | ||
| KOG2395|consensus | 644 | 97.22 | ||
| KOG2114|consensus | 933 | 97.22 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.09 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 97.07 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 97.06 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.05 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.04 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.04 | |
| KOG2444|consensus | 238 | 97.03 | ||
| KOG1008|consensus | 783 | 97.0 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.93 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 96.89 | |
| KOG2079|consensus | 1206 | 96.84 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 96.8 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.78 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 96.76 | |
| KOG1916|consensus | 1283 | 96.73 | ||
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.67 | |
| KOG2079|consensus | 1206 | 96.6 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 96.43 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 96.39 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 96.38 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 96.35 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 96.34 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 96.26 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 96.23 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.2 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 96.16 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 96.12 | |
| KOG2395|consensus | 644 | 96.08 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.07 | |
| KOG4499|consensus | 310 | 96.01 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.99 | |
| KOG4441|consensus | 571 | 95.98 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.89 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 95.88 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 95.87 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 95.84 | |
| KOG2444|consensus | 238 | 95.81 | ||
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 95.69 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.62 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 95.57 | |
| KOG3630|consensus | 1405 | 95.49 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 95.24 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 95.22 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 95.21 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 95.2 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 95.06 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 94.95 | |
| KOG4460|consensus | 741 | 94.95 | ||
| PF08513 | 27 | LisH: LisH; InterPro: IPR013720 The LisH motif is | 94.94 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 94.82 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 94.82 | |
| KOG3630|consensus | 1405 | 94.72 | ||
| PF08801 | 422 | Nucleoporin_N: Nup133 N terminal like; InterPro: I | 94.71 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 94.68 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 94.65 | |
| KOG4499|consensus | 310 | 94.64 | ||
| KOG1897|consensus | 1096 | 94.57 | ||
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 94.5 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 94.2 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 94.13 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 94.04 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 93.93 | |
| KOG2280|consensus | 829 | 93.9 | ||
| PF05935 | 477 | Arylsulfotrans: Arylsulfotransferase (ASST); Inter | 93.83 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 93.68 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 93.6 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 93.47 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 93.35 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 93.3 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 93.12 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 93.05 | |
| smart00667 | 34 | LisH Lissencephaly type-1-like homology motif. Alp | 93.0 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 92.99 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 92.79 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 92.69 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 92.57 | |
| TIGR03032 | 335 | conserved hypothetical protein TIGR03032. This pro | 92.53 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 92.46 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 92.23 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 92.06 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 91.9 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 91.74 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 91.56 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 91.43 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 91.26 | |
| KOG2247|consensus | 615 | 91.08 | ||
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 90.84 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 90.79 | |
| KOG1916|consensus | 1283 | 90.36 | ||
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 90.11 | |
| KOG4460|consensus | 741 | 90.07 | ||
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 89.95 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 89.57 | |
| KOG1983|consensus | 993 | 89.2 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 88.87 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 88.42 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 88.37 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 88.21 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 88.18 | |
| KOG2247|consensus | 615 | 87.88 | ||
| PRK10115 | 686 | protease 2; Provisional | 87.05 | |
| KOG2377|consensus | 657 | 87.03 | ||
| smart00564 | 33 | PQQ beta-propeller repeat. Beta-propeller repeat o | 87.0 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 86.93 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 86.68 | |
| KOG1897|consensus | 1096 | 86.6 | ||
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 86.09 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 85.77 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 85.77 | |
| PLN02153 | 341 | epithiospecifier protein | 85.37 | |
| PRK10115 | 686 | protease 2; Provisional | 85.3 | |
| PF03088 | 89 | Str_synth: Strictosidine synthase; InterPro: IPR01 | 85.23 | |
| PF01011 | 38 | PQQ: PQQ enzyme repeat family.; InterPro: IPR00237 | 85.18 | |
| PF14269 | 299 | Arylsulfotran_2: Arylsulfotransferase (ASST) | 84.99 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 84.69 | |
| KOG1900|consensus | 1311 | 83.96 | ||
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 83.76 | |
| KOG0783|consensus | 1267 | 83.44 | ||
| PHA02790 | 480 | Kelch-like protein; Provisional | 83.16 | |
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 83.01 | |
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 80.58 |
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-54 Score=341.40 Aligned_cols=329 Identities=54% Similarity=0.868 Sum_probs=292.6
Q ss_pred CCcHHHHHhHHHHHHHHHHHHhhCCcHHHHHHHHh-hcCCCCCCCCchHHHHHHHhhhccCcccccccCCCCCCccchhc
Q psy15157 8 KSSAEVLRRQEALYRLIISQLYYDGHHPMAITLQS-SCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQEI 86 (344)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~a~~~~~-~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (344)
.++...++.|+.||+||++||.+||+.++|..|.. .+.+.+.+.|++||..|+.++++.+.+........ ..+....
T Consensus 2 ~~~~~~lkdre~lyrLiisqL~ydg~~qiA~~lan~~~~~~~~~~PserLl~lv~~gmq~~~d~~~~~~~~--S~~~~t~ 79 (430)
T KOG0640|consen 2 GDPEQALKDREILYRLIISQLRYDGLSQIASALANATMTPANICAPSERLLHLVAKGMQAENDGDLRAVSS--SVLLITT 79 (430)
T ss_pred CChHhhhchHHHHHHHHHHHHhhccHHHHHHHHHHhhcCcCCCCCCHHHHHHHHHHHhhcccCcceecccc--cccceec
Confidence 35667799999999999999999999999999998 56678889999999999999999887755443322 1222334
Q ss_pred ccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCC
Q psy15157 87 LIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQ 166 (344)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 166 (344)
-..++.+++|..+.++..+.+..++..++..|++++++.+||+||.++|||+.|.+|+|.|++.+...............
T Consensus 80 p~~~giDle~dadaq~~s~e~~~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~q 159 (430)
T KOG0640|consen 80 PVTAGIDLEFDADAQGSSPEPSEYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQ 159 (430)
T ss_pred cCcCceeeeeccccccCCCCCcccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcc
Confidence 56788999999999999999999999999999999999999999999999999999999999988766633333333334
Q ss_pred CCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCE
Q psy15157 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV 246 (344)
Q Consensus 167 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 246 (344)
...+.++++..|..+|+++.|+|...+|++|+.|++|++||+.....++.++......+|.++.|+|.|.++++|+...+
T Consensus 160 a~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~ 239 (430)
T KOG0640|consen 160 ARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPT 239 (430)
T ss_pred cCCceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCc
Confidence 55689999999999999999999999999999999999999999888888888888899999999999999999999999
Q ss_pred EEEE--------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 247 LRLY--------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 247 i~~~--------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+++| ++.|++.++|+.||.|++||--+++|+.++...|.++.|.+..|..+|+|
T Consensus 240 ~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~ky 319 (430)
T KOG0640|consen 240 LRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKY 319 (430)
T ss_pred eeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeE
Confidence 9997 78899999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeee
Q psy15157 301 LLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTL 338 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 338 (344)
+++.|.|..+++|.+.+|+++..|.|.+..+++...+.
T Consensus 320 iLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtq 357 (430)
T KOG0640|consen 320 ILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQ 357 (430)
T ss_pred EeecCCcceeeeeeecCCceEEEEecCCcccchhhhhh
Confidence 99999999999999999999999999988887765543
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=252.17 Aligned_cols=209 Identities=24% Similarity=0.454 Sum_probs=183.7
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.||.++|.|++|+|+|..|+||+.|.++|+||+.+ ..+..+.++|...|.|++|+|||
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~T------------------eTp~~t~KgH~~WVlcvawsPDg 169 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDT------------------ETPLFTCKGHKNWVLCVAWSPDG 169 (480)
T ss_pred ccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCC------------------CCcceeecCCccEEEEEEECCCc
Confidence 445789999999999999999999999999999999964 55688999999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-----CCCEEEEEeCCCEEEEE----------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-----CGDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~~i~~~---------------- 250 (344)
+.|++|+.||+|++||..+++..- ....+|...|++++|.| ..+++++++.||.+++|
T Consensus 170 k~iASG~~dg~I~lwdpktg~~~g-~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~ 248 (480)
T KOG0271|consen 170 KKIASGSKDGSIRLWDPKTGQQIG-RALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTA 248 (480)
T ss_pred chhhccccCCeEEEecCCCCCccc-ccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCcc
Confidence 999999999999999988876432 23356788888888876 45678888888888887
Q ss_pred --------------------------------------------------------------------------------
Q psy15157 251 -------------------------------------------------------------------------------- 250 (344)
Q Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T Consensus 249 ~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY 328 (480)
T KOG0271|consen 249 SVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERY 328 (480)
T ss_pred ceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHH
Confidence
Q ss_pred -----------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc
Q psy15157 251 -----------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA 283 (344)
Q Consensus 251 -----------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 283 (344)
+||+++++++|.|..|++||.++|+.+.++. +
T Consensus 329 ~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfR-G 407 (480)
T KOG0271|consen 329 EAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFR-G 407 (480)
T ss_pred HHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhh-h
Confidence 8999999999999999999999999999998 4
Q ss_pred CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 284 ~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|- +.|..++|+.|.++|++|+.|.++++||+++.+...-+.||. ...+.+.+++|+.
T Consensus 408 Hv-~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~--DEVf~vDwspDG~ 464 (480)
T KOG0271|consen 408 HV-AAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHA--DEVFAVDWSPDGQ 464 (480)
T ss_pred cc-ceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCC--ceEEEEEecCCCc
Confidence 44 479999999999999999999999999999999988888875 4567888888874
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=220.11 Aligned_cols=235 Identities=22% Similarity=0.370 Sum_probs=190.8
Q ss_pred CCCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcccc
Q psy15157 75 EPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAK 154 (344)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~ 154 (344)
++.+...|....++..+....-..+.....+ .++..+.+|+..|+++.|..+|++++|||.||+++|||++.
T Consensus 43 VNrLeiTpdk~~LAaa~~qhvRlyD~~S~np----~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~---- 114 (311)
T KOG0315|consen 43 VNRLEITPDKKDLAAAGNQHVRLYDLNSNNP----NPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRS---- 114 (311)
T ss_pred eeeEEEcCCcchhhhccCCeeEEEEccCCCC----CceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccC----
Confidence 3344555666666665544333333332222 25667899999999999999999999999999999999974
Q ss_pred ccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC
Q psy15157 155 SSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234 (344)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 234 (344)
........|.++|+++..+|+...|++|..+|.|++||+....+..... ......|.++...|+
T Consensus 115 ---------------~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li-Pe~~~~i~sl~v~~d 178 (311)
T KOG0315|consen 115 ---------------LSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI-PEDDTSIQSLTVMPD 178 (311)
T ss_pred ---------------cccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC-CCCCcceeeEEEcCC
Confidence 2234455688999999999999999999999999999999875543332 345578999999999
Q ss_pred CCEEEEEeCCCEEEEE-----------------------------cCCCCEEEEEeCCCcEEEEeCCCC-eEEeeecccC
Q psy15157 235 GDYMVVGTDHFVLRLY-----------------------------SSDGRIYCSGSKDGDIKIWDGVSS-KCVATFSKAH 284 (344)
Q Consensus 235 ~~~l~~~~~~~~i~~~-----------------------------~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~ 284 (344)
|.+++.+...|.+.+| +|++++|+++|.|.+++||+.... +....+. +|
T Consensus 179 gsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~-gh 257 (311)
T KOG0315|consen 179 GSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLT-GH 257 (311)
T ss_pred CcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEee-cC
Confidence 9999999999999999 899999999999999999999887 4444444 44
Q ss_pred CCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceee
Q psy15157 285 DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 285 ~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 335 (344)
. .++..++||.||+||++|+.|+.+++||++.++.++.+.||.....+..
T Consensus 258 ~-rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ 307 (311)
T KOG0315|consen 258 Q-RWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVA 307 (311)
T ss_pred C-ceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEE
Confidence 4 5899999999999999999999999999999999999999976655443
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=252.86 Aligned_cols=225 Identities=24% Similarity=0.423 Sum_probs=191.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcccccc-----CCC--------CCCcCCCCCCceEEEecCCcC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS-----MES--------SEPQNDQQGHPVIRTLYDHIE 180 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~h~~ 180 (344)
++..-...++|..|++|+.++|.|-.|..|++|.+........ ... .....+........++.+|.+
T Consensus 373 T~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~G 452 (707)
T KOG0263|consen 373 TFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSG 452 (707)
T ss_pred EEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCC
Confidence 3344456799999999999999999999999999975321110 000 011223344556677999999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------- 250 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------- 250 (344)
+|..+.|+|+.++|++|+.|+++|+|.+.+..+...+ .+|..+|+++.|+|-|-|+++++.|++.++|
T Consensus 453 PVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y--~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRi 530 (707)
T KOG0263|consen 453 PVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIY--KGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRI 530 (707)
T ss_pred ceeeeeecccccceeeccCCcceeeeecccceeEEEe--cCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhh
Confidence 9999999999999999999999999999998765444 4799999999999999999999999999999
Q ss_pred -------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 251 -------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 251 -------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+|+..|+++||.|.++|+||..+|..++.|.+ |. ++|.+++|+|+|++|++|++||.|.+||+.+
T Consensus 531 faghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~-~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~ 608 (707)
T KOG0263|consen 531 FAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-HK-GPVTALAFSPCGRYLASGDEDGLIKIWDLAN 608 (707)
T ss_pred hcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-CC-CceEEEEEcCCCceEeecccCCcEEEEEcCC
Confidence 79999999999999999999999999999974 54 5899999999999999999999999999999
Q ss_pred CeeEEEeecCCCcCceeeeeeeccCCC
Q psy15157 318 ARCLIAYTGAGSMGQQFELTLTVDADV 344 (344)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (344)
|+.+..+.+| .+...+++|+.|+.|
T Consensus 609 ~~~v~~l~~H--t~ti~SlsFS~dg~v 633 (707)
T KOG0263|consen 609 GSLVKQLKGH--TGTIYSLSFSRDGNV 633 (707)
T ss_pred Ccchhhhhcc--cCceeEEEEecCCCE
Confidence 9999999999 666777777877754
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=230.04 Aligned_cols=279 Identities=22% Similarity=0.374 Sum_probs=219.1
Q ss_pred HHHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccccCCCCCCccchhcccCCCceee-ecCCCC----CCCCCCC
Q psy15157 34 HPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQEILIGPGLDLE-FESDVD----PSAPEPA 108 (344)
Q Consensus 34 ~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~ 108 (344)
..+|+++..|++.++| .||..|+.++++|+.++. ++.||..+. |.-... .....|.
T Consensus 142 a~IAQ~ls~EV~VVpp----SRLlaLlGQaLKWQqHQG---------------LLPPGt~iDLFRGkAA~K~~~Ee~~Pt 202 (508)
T KOG0275|consen 142 AVIAQALSGEVHVVPP----SRLLALLGQALKWQQHQG---------------LLPPGTTIDLFRGKAAMKDQEEERYPT 202 (508)
T ss_pred HHHHHHhcCceEEcCh----HHHHHHHHHHhhhHhhcC---------------CCCCCceeeeccchhhhhhhHhhhchH
Confidence 5677777777776665 899999999999999853 112221111 100000 0001111
Q ss_pred ccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 109 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.....+-.+.+..+.|..|||||+||++|+.||.|.+|+..++..... -..+....+..+..+|.|+.|+
T Consensus 203 ~l~r~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKD----------LkYQAqd~fMMmd~aVlci~FS 272 (508)
T KOG0275|consen 203 QLARSIKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKD----------LKYQAQDNFMMMDDAVLCISFS 272 (508)
T ss_pred HhhhheecccccchhheeeCCCCceEeeccccceeeeehhccchhhhh----------hhhhhhcceeecccceEEEeec
Confidence 222223347788899999999999999999999999999976543221 1123344567789999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
.|...+++|+.||.|++|.+.++.+.+.+. ..|...|+|+.|+.++..+++++.|.++++.
T Consensus 273 RDsEMlAsGsqDGkIKvWri~tG~ClRrFd-rAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyv 351 (508)
T KOG0275|consen 273 RDSEMLASGSQDGKIKVWRIETGQCLRRFD-RAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYV 351 (508)
T ss_pred ccHHHhhccCcCCcEEEEEEecchHHHHhh-hhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccc
Confidence 999999999999999999999999887665 3588899999999999999999999999984
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
.++|..+++++.||+|++|+.++.+|+.++.......+|+++..-| +...+++|...++|+|.++ .|+.+++|
T Consensus 352 n~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsf 430 (508)
T KOG0275|consen 352 NEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSF 430 (508)
T ss_pred cceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeee
Confidence 7899999999999999999999999999998777777899998877 6678999999999999999 78888988
Q ss_pred e-cCCCcCceeeeeeeccCC
Q psy15157 325 T-GAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 325 ~-~~~~~~~~~~~~~~~~~~ 343 (344)
. |....|.-+....++.+|
T Consensus 431 sSGkREgGdFi~~~lSpkGe 450 (508)
T KOG0275|consen 431 SSGKREGGDFINAILSPKGE 450 (508)
T ss_pred ccCCccCCceEEEEecCCCc
Confidence 7 456777777777777665
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=236.18 Aligned_cols=200 Identities=27% Similarity=0.418 Sum_probs=182.4
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--CCEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS--APIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l 194 (344)
|-..+|..+.||.+++.|+|||.+|.++||+..+ ...+.++.+|...|.++.|+|. +..+
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~------------------~~~~~~l~gH~~~v~~~~fhP~~~~~~l 234 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQ------------------CNLLQTLRGHTSRVGAAVFHPVDSDLNL 234 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCC------------------cceeEEEeccccceeeEEEccCCCccce
Confidence 5678999999999999999999999999999853 4678999999999999999997 5589
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------c
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------S 251 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~ 251 (344)
+||+.||++++|++.+...+.. ..+|...|..++|+|+|++|++++.|.+-++| .
T Consensus 235 at~s~Dgtvklw~~~~e~~l~~--l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~ 312 (459)
T KOG0272|consen 235 ATASADGTVKLWKLSQETPLQD--LEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQ 312 (459)
T ss_pred eeeccCCceeeeccCCCcchhh--hhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEec
Confidence 9999999999999988755443 35688999999999999999999999999998 6
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
+||.++++|+.|..-+|||+++++++..+.+ |. .+|.++.|+|+|..|+|||.|++++|||++..+++.++.+|....
T Consensus 313 ~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~-k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlV 390 (459)
T KOG0272|consen 313 PDGSLAATGGLDSLGRVWDLRTGRCIMFLAG-HI-KEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLV 390 (459)
T ss_pred CCCceeeccCccchhheeecccCcEEEEecc-cc-cceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchh
Confidence 8999999999999999999999999988875 55 479999999999999999999999999999999999999999888
Q ss_pred ceeeeee
Q psy15157 332 QQFELTL 338 (344)
Q Consensus 332 ~~~~~~~ 338 (344)
+++.+.-
T Consensus 391 S~Vk~~p 397 (459)
T KOG0272|consen 391 SQVKYSP 397 (459)
T ss_pred hheEecc
Confidence 8877664
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=239.76 Aligned_cols=206 Identities=24% Similarity=0.357 Sum_probs=184.8
Q ss_pred cceeEEecCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 110 YETAYVTSHKSPCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
.....|.||.+.|.++.|+|. +..+|||+.||++++|++++ ..++..+.+|...|..++|
T Consensus 208 ~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~------------------e~~l~~l~gH~~RVs~Vaf 269 (459)
T KOG0272|consen 208 NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ------------------ETPLQDLEGHLARVSRVAF 269 (459)
T ss_pred ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCC------------------Ccchhhhhcchhhheeeee
Confidence 456778999999999999996 56999999999999999963 3567889999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------- 250 (344)
+|+|++|+|++.|.+-++||++++... +...+|...|.+++|+++|..+++|+.|..-++|
T Consensus 270 HPsG~~L~TasfD~tWRlWD~~tk~El--L~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~ 347 (459)
T KOG0272|consen 270 HPSGKFLGTASFDSTWRLWDLETKSEL--LLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKE 347 (459)
T ss_pred cCCCceeeecccccchhhcccccchhh--HhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccc
Confidence 999999999999999999999998543 4456899999999999999999999999999988
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
+|+|..++|||.|++++|||++..+.+.++. +|. .-|+.++|+| .|.+|+|++.|++++||..++..++++
T Consensus 348 I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ip-AH~-nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ks 425 (459)
T KOG0272|consen 348 ILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIP-AHS-NLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKS 425 (459)
T ss_pred eeeEeECCCceEEeecCCCCcEEEeeecccccceecc-ccc-chhhheEecccCCeEEEEcccCcceeeecCCCcccchh
Confidence 8999999999999999999999999988887 555 4699999998 889999999999999999999999999
Q ss_pred eecCCCcCceeeee
Q psy15157 324 YTGAGSMGQQFELT 337 (344)
Q Consensus 324 ~~~~~~~~~~~~~~ 337 (344)
+.||.+.....+++
T Consensus 426 LaGHe~kV~s~Dis 439 (459)
T KOG0272|consen 426 LAGHEGKVISLDIS 439 (459)
T ss_pred hcCCccceEEEEec
Confidence 99997765444443
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=216.88 Aligned_cols=215 Identities=22% Similarity=0.368 Sum_probs=181.0
Q ss_pred CCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEE
Q psy15157 105 PEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC 184 (344)
Q Consensus 105 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 184 (344)
.......+..+.||...|..+..++||+++++++.|+.+++||+.+ ++..+.|.+|...|.+
T Consensus 49 d~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~------------------g~~t~~f~GH~~dVls 110 (315)
T KOG0279|consen 49 DIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLAT------------------GESTRRFVGHTKDVLS 110 (315)
T ss_pred ccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecC------------------CcEEEEEEecCCceEE
Confidence 3344556778899999999999999999999999999999999963 4677889999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEE------------
Q psy15157 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~------------ 250 (344)
++|++|...++||+.|.+|++|+.-... ...+....+...|.|+.|+|+ ..+|+.++.|+++++|
T Consensus 111 va~s~dn~qivSGSrDkTiklwnt~g~c-k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~ 189 (315)
T KOG0279|consen 111 VAFSTDNRQIVSGSRDKTIKLWNTLGVC-KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFI 189 (315)
T ss_pred EEecCCCceeecCCCcceeeeeeecccE-EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccc
Confidence 9999999999999999999999987643 233332333788999999998 7899999999999999
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+|||.+.++|+.||.+.+||++.++.+..+. +. ..|++++|+|+..+|+.+. +..|+|||+.++.
T Consensus 190 gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~--a~-~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 190 GHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE--AF-DIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKA 265 (315)
T ss_pred cccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc--CC-CeEeeEEecCCceeEeecc-CCceEEEeccchh
Confidence 8999999999999999999999999988875 22 4699999999876666555 5569999999999
Q ss_pred eEEEeecC--CC-----cCceeeeeeeccC
Q psy15157 320 CLIAYTGA--GS-----MGQQFELTLTVDA 342 (344)
Q Consensus 320 ~~~~~~~~--~~-----~~~~~~~~~~~~~ 342 (344)
++..++.. +. ...++++.++.|+
T Consensus 266 ~v~~l~~d~~g~s~~~~~~~clslaws~dG 295 (315)
T KOG0279|consen 266 VVEELKLDGIGPSSKAGDPICLSLAWSADG 295 (315)
T ss_pred hhhhccccccccccccCCcEEEEEEEcCCC
Confidence 99887643 22 4567777777665
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=245.13 Aligned_cols=190 Identities=29% Similarity=0.500 Sum_probs=172.5
Q ss_pred ccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 109 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
......+.||.++|..+.|+|+.++|+++|.|++||+|.+.+ +..+-.+++|..+|+++.|+
T Consensus 441 ~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t------------------~s~~V~y~GH~~PVwdV~F~ 502 (707)
T KOG0263|consen 441 SGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDT------------------WSCLVIYKGHLAPVWDVQFA 502 (707)
T ss_pred CceeEEeecCCCceeeeeecccccceeeccCCcceeeeeccc------------------ceeEEEecCCCcceeeEEec
Confidence 344566899999999999999999999999999999999964 56677889999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
|.|-+|+||+.|++.++|........+.+ .+|...|.|+.|+|+..|+++|+.|.++++|
T Consensus 503 P~GyYFatas~D~tArLWs~d~~~PlRif--aghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V 580 (707)
T KOG0263|consen 503 PRGYYFATASHDQTARLWSTDHNKPLRIF--AGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPV 580 (707)
T ss_pred CCceEEEecCCCceeeeeecccCCchhhh--cccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCce
Confidence 99999999999999999998886655544 5688899999999999999999999999999
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
+|.|++|++|+.||.|.+||+.+++.+..+.+ |. +.|.++.|+.+|..|++||.|.+|++||+..-..
T Consensus 581 ~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~-Ht-~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~ 653 (707)
T KOG0263|consen 581 TALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKG-HT-GTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIE 653 (707)
T ss_pred EEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhc-cc-CceeEEEEecCCCEEEecCCCCeEEEEEchhhcc
Confidence 89999999999999999999999999999884 44 5799999999999999999999999999976443
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=210.23 Aligned_cols=210 Identities=20% Similarity=0.304 Sum_probs=182.6
Q ss_pred eeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
..++.+|++.|+.++..+. .+.+++++.|.++.+|++... +...+.+++.+.+|...|..+..+++
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~d-------------d~~~G~~~r~~~GHsH~v~dv~~s~d 74 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSD-------------DIKYGVPVRRLTGHSHFVSDVVLSSD 74 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccC-------------ccccCceeeeeeccceEecceEEccC
Confidence 4468999999999999885 568999999999999999642 33556788999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
|++.++++.|+++++||+.+++. ...+.+|...|.+++|+++.+.+++|+.|.++.+|
T Consensus 75 g~~alS~swD~~lrlWDl~~g~~--t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVs 152 (315)
T KOG0279|consen 75 GNFALSASWDGTLRLWDLATGES--TRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVS 152 (315)
T ss_pred CceEEeccccceEEEEEecCCcE--EEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEE
Confidence 99999999999999999999854 45567899999999999999999999999999999
Q ss_pred ----cCC--CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ----SSD--GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ----~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+|+ ..++++++.|+++++||+++.+....+. +|. +.++.++++|||...++|+.||.+.+||++.++.+..+
T Consensus 153 cvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~-gh~-~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl 230 (315)
T KOG0279|consen 153 CVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFI-GHS-GYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSL 230 (315)
T ss_pred EEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccc-ccc-ccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEec
Confidence 455 7899999999999999999999888887 455 46999999999999999999999999999999998888
Q ss_pred ecCCCcCceeeeeeecc
Q psy15157 325 TGAGSMGQQFELTLTVD 341 (344)
Q Consensus 325 ~~~~~~~~~~~~~~~~~ 341 (344)
.+... ..++.|+|+
T Consensus 231 ~a~~~---v~sl~fspn 244 (315)
T KOG0279|consen 231 EAFDI---VNSLCFSPN 244 (315)
T ss_pred cCCCe---EeeEEecCC
Confidence 65432 344445443
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=223.21 Aligned_cols=200 Identities=28% Similarity=0.458 Sum_probs=174.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|++++|+.+|..||+|+.||.++||+.. +..+.++..|.++|.++.|+..|.+|++++.
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~-------------------G~l~~tl~~HkgPI~slKWnk~G~yilS~~v 296 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKD-------------------GNLISTLGQHKGPIFSLKWNKKGTYILSGGV 296 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecC-------------------chhhhhhhccCCceEEEEEcCCCCEEEeccC
Confidence 569999999999999999999999999975 5567788999999999999999999999999
Q ss_pred CCcEEEEEcCCCccccce---------------------------------------eeeccccceEEEEEecCCCEEEE
Q psy15157 200 DKTVKMFDYSKSSVRKAH---------------------------------------KTIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~---------------------------------------~~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
||++.+||..++.....+ ...+|...|.++.|+|.|..|++
T Consensus 297 D~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS 376 (524)
T KOG0273|consen 297 DGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLAS 376 (524)
T ss_pred CccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEE
Confidence 999999997655322111 23457889999999999999999
Q ss_pred EeCCCEEEEE--------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCcc
Q psy15157 241 GTDHFVLRLY--------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE 288 (344)
Q Consensus 241 ~~~~~~i~~~--------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 288 (344)
+++|+++++| ...+..+++++.|++|++||+..+.+++.+.. |. .+
T Consensus 377 ~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k-H~-~p 454 (524)
T KOG0273|consen 377 CSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK-HQ-EP 454 (524)
T ss_pred ecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc-CC-Cc
Confidence 9999999999 23457799999999999999999999999974 33 47
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 289 v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|.+++|+|+|+|+++|+.||.|.+|++++++.++.+.+.++ .+.++|+.+++
T Consensus 455 VysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~---Ifel~Wn~~G~ 506 (524)
T KOG0273|consen 455 VYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGG---IFELCWNAAGD 506 (524)
T ss_pred eEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCe---EEEEEEcCCCC
Confidence 99999999999999999999999999999999999988665 56777666553
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=221.62 Aligned_cols=228 Identities=26% Similarity=0.396 Sum_probs=176.1
Q ss_pred CCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccC-
Q psy15157 79 GLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSM- 157 (344)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~- 157 (344)
.+.|....+++++.|........ ....+..+..+|...|.|++|+|||+.+|+|+.||+|++||..++......
T Consensus 122 ~fsp~g~~l~tGsGD~TvR~WD~-----~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l 196 (480)
T KOG0271|consen 122 QFSPTGSRLVTGSGDTTVRLWDL-----DTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRAL 196 (480)
T ss_pred EecCCCceEEecCCCceEEeecc-----CCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccc
Confidence 45555555555554432222111 122344567899999999999999999999999999999998764332111
Q ss_pred -----------------------------CCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 158 -----------------------------ESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 158 -----------------------------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
+.....++...+.++..+.+|+.+|+|+.|-.+| ++++|+.|++|++|+.
T Consensus 197 ~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a 275 (480)
T KOG0271|consen 197 RGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRA 275 (480)
T ss_pred cCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEEc
Confidence 1111234455667889999999999999998665 8999999999999996
Q ss_pred CCCccccce-----------------------------------------------------------------------
Q psy15157 209 SKSSVRKAH----------------------------------------------------------------------- 217 (344)
Q Consensus 209 ~~~~~~~~~----------------------------------------------------------------------- 217 (344)
..+.+...+
T Consensus 276 ~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~ 355 (480)
T KOG0271|consen 276 LDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFK 355 (480)
T ss_pred cchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccc
Confidence 554221111
Q ss_pred ------eeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEE
Q psy15157 218 ------KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 218 ------~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~i 268 (344)
+..+|..-|+.+.|+||++++++++-|..|++| +.|.+++++||.|.++++
T Consensus 356 ~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKv 435 (480)
T KOG0271|consen 356 SKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKV 435 (480)
T ss_pred cccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEE
Confidence 122355678999999999999999999999998 678899999999999999
Q ss_pred EeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
||+++.+....+.+ |. ..|.++.|+|||..+++|+.|..+++|.
T Consensus 436 w~V~tkKl~~DLpG-h~-DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 436 WDVRTKKLKQDLPG-HA-DEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred EEeeeeeecccCCC-CC-ceEEEEEecCCCceeecCCCceEEEeec
Confidence 99999999988874 44 3699999999999999999999999994
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=223.06 Aligned_cols=256 Identities=20% Similarity=0.245 Sum_probs=200.3
Q ss_pred CCCchHHHHHHHhhhccCcccccccCCCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECC
Q psy15157 50 CPPSDRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSI 129 (344)
Q Consensus 50 ~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 129 (344)
..|+.||..|++++..+|.+.+...-.. ..+.+..+........+..+.+++..|++.|+-+.||+
T Consensus 169 llP~rRLehLl~qAv~~Q~d~cvyhnsl--------------dsvsll~Dh~c~~~qip~qt~qil~~htdEVWfl~FS~ 234 (519)
T KOG0293|consen 169 LLPKRRLEHLLEQAVKYQRDSCVYHNSL--------------DSVSLLSDHFCGRLQIPSQTWQILQDHTDEVWFLQFSH 234 (519)
T ss_pred cCChHHHHHHHHHHHHHHHhHhHHhccc--------------chhhhhhhcccCcccCCchhhhhHhhCCCcEEEEEEcC
Confidence 5789999999999999999876433211 00222333333333445556778899999999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
+|+||||++.|.+..||++... ...+...++.+|..+|..+.|+||.++|++|+.|..+.+||+.
T Consensus 235 nGkyLAsaSkD~Taiiw~v~~d---------------~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~ 299 (519)
T KOG0293|consen 235 NGKYLASASKDSTAIIWIVVYD---------------VHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVD 299 (519)
T ss_pred CCeeEeeccCCceEEEEEEecC---------------cceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCC
Confidence 9999999999999999998531 2246678999999999999999999999999999999999999
Q ss_pred CCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------------------------
Q psy15157 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------------------------- 250 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------------------------- 250 (344)
++.....+... +...+.+++|.|||..+++|+.|+.+..|
T Consensus 300 tgd~~~~y~~~-~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i 378 (519)
T KOG0293|consen 300 TGDLRHLYPSG-LGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKI 378 (519)
T ss_pred cchhhhhcccC-cCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccce
Confidence 99876665533 56778999999999999999999999998
Q ss_pred -------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEE
Q psy15157 251 -------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSS 304 (344)
Q Consensus 251 -------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~ 304 (344)
+.+++++++.-.+..|++||+...+.+..+.++..+..+..-+|-- +..++++|
T Consensus 379 ~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSG 458 (519)
T KOG0293|consen 379 RLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASG 458 (519)
T ss_pred eeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEec
Confidence 4455555565666667777777666666666554444454555643 55899999
Q ss_pred eCCCcEEEEEcCCCeeEEEeecCCCcCceee
Q psy15157 305 GKDSLVKLWELSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 335 (344)
|+|+.|+||+..+|+++..+.||.....+++
T Consensus 459 SED~kvyIWhr~sgkll~~LsGHs~~vNcVs 489 (519)
T KOG0293|consen 459 SEDSKVYIWHRISGKLLAVLSGHSKTVNCVS 489 (519)
T ss_pred CCCceEEEEEccCCceeEeecCCcceeeEEe
Confidence 9999999999999999999999986655543
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=217.85 Aligned_cols=205 Identities=26% Similarity=0.456 Sum_probs=183.5
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.||.+.|.+++|+..|+++|+++.|-.+++||..+ ...+++.+.+|...|.+++|-|.|
T Consensus 143 e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~-----------------~~~c~ks~~gh~h~vS~V~f~P~g 205 (406)
T KOG0295|consen 143 ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDT-----------------FFRCIKSLIGHEHGVSSVFFLPLG 205 (406)
T ss_pred hhhhhccccceeEEEEecCccEEEecCCccchhheeHHH-----------------HHHHHHHhcCcccceeeEEEEecC
Confidence 445789999999999999999999999999999999963 245667788999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.+++|++.|.+|+.|++.++-+...+ .+|...|..++.+.||..+++|+.+.++++|
T Consensus 206 d~ilS~srD~tik~We~~tg~cv~t~--~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci 283 (406)
T KOG0295|consen 206 DHILSCSRDNTIKAWECDTGYCVKTF--PGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECI 283 (406)
T ss_pred CeeeecccccceeEEecccceeEEec--cCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEE
Confidence 99999999999999999999766555 5678899999999999999999999999999
Q ss_pred -----------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEE
Q psy15157 251 -----------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313 (344)
Q Consensus 251 -----------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vw 313 (344)
...+.++++++.|++|++||+.++.++.++. +|. .+|..++|+|.|+||+++.+|+++++|
T Consensus 284 ~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~-ghd-nwVr~~af~p~Gkyi~ScaDDktlrvw 361 (406)
T KOG0295|consen 284 AWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLV-GHD-NWVRGVAFSPGGKYILSCADDKTLRVW 361 (406)
T ss_pred EecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEe-ccc-ceeeeeEEcCCCeEEEEEecCCcEEEE
Confidence 1245799999999999999999999999997 444 589999999999999999999999999
Q ss_pred EcCCCeeEEEeecCCCcCceeeee
Q psy15157 314 ELSSARCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~~~ 337 (344)
|+++++|++++..|..-...+++.
T Consensus 362 dl~~~~cmk~~~ah~hfvt~lDfh 385 (406)
T KOG0295|consen 362 DLKNLQCMKTLEAHEHFVTSLDFH 385 (406)
T ss_pred EeccceeeeccCCCcceeEEEecC
Confidence 999999999999887776666554
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=233.62 Aligned_cols=226 Identities=23% Similarity=0.356 Sum_probs=183.3
Q ss_pred EEe-cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccc-----------------cc------cCC-C-------CC
Q psy15157 114 YVT-SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLA-----------------KS------SME-S-------SE 161 (344)
Q Consensus 114 ~~~-~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~-----------------~~------~~~-~-------~~ 161 (344)
.+. +|.+.|+++.||+||+|||+||.||.|+||.+..... .. ... . ..
T Consensus 261 e~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~ 340 (712)
T KOG0283|consen 261 EISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR 340 (712)
T ss_pred ccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccc
Confidence 344 8999999999999999999999999999999865100 00 000 0 00
Q ss_pred Cc-----------CCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEE
Q psy15157 162 PQ-----------NDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230 (344)
Q Consensus 162 ~~-----------~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 230 (344)
.. ...-..+++..+.||.+.|.++.|+.++ +|+|++.|.+|++|++....+ +....|...|+|++
T Consensus 341 ~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~C---L~~F~HndfVTcVa 416 (712)
T KOG0283|consen 341 KGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKEC---LKVFSHNDFVTCVA 416 (712)
T ss_pred cccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcce---eeEEecCCeeEEEE
Confidence 00 0011235677889999999999999765 899999999999999987655 45556999999999
Q ss_pred Eec-CCCEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC--
Q psy15157 231 FHP-CGDYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD-- 285 (344)
Q Consensus 231 ~~~-~~~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-- 285 (344)
|+| |.+|+++|+-|+.+++| .|+|++.++|+.+|.+++|+....+....+.-..+
T Consensus 417 FnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~ 496 (712)
T KOG0283|consen 417 FNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNK 496 (712)
T ss_pred ecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccC
Confidence 999 78999999999999999 79999999999999999999988776655431111
Q ss_pred ----CccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 286 ----GAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 286 ----~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..|+++.|.| +...|++.+.|..|||+|++...++..|+|......++..+|+.|++
T Consensus 497 Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk 559 (712)
T KOG0283|consen 497 KKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGK 559 (712)
T ss_pred ccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCC
Confidence 23699999997 33458888899999999999999999999999999999999999875
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=200.39 Aligned_cols=227 Identities=19% Similarity=0.276 Sum_probs=188.1
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCC------------------------CCCC----
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSME------------------------SSEP---- 162 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~------------------------~~~~---- 162 (344)
...+|+||.+.|.++.|++|.++++++|.||.+.|||.-+........ +.-.
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~l 126 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPL 126 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEec
Confidence 346789999999999999999999999999999999986532211110 0000
Q ss_pred --cCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEE
Q psy15157 163 --QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMV 239 (344)
Q Consensus 163 --~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 239 (344)
.......+..+.+.+|.+-+.|+.|-+| ..|+|++.|.+..+||+++++....+ .+|...|.++.++| +++.++
T Consensus 127 s~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f--~GH~gDV~slsl~p~~~ntFv 203 (343)
T KOG0286|consen 127 STRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVF--HGHTGDVMSLSLSPSDGNTFV 203 (343)
T ss_pred ccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEe--cCCcccEEEEecCCCCCCeEE
Confidence 0112223566789999999999999884 57899999999999999999765444 57999999999999 999999
Q ss_pred EEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc
Q psy15157 240 VGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296 (344)
Q Consensus 240 ~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~ 296 (344)
+|+.|+..++| .|+|.-|++|+.|+++++||++....+..+.......+|++++|+.
T Consensus 204 Sg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~ 283 (343)
T KOG0286|consen 204 SGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSK 283 (343)
T ss_pred ecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcc
Confidence 99999999999 6899999999999999999999999888887555556799999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 297 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.|++|++|..|.++.+||.-.++.+..+.||..-.++ +..++|+
T Consensus 284 SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvSc--l~~s~DG 327 (343)
T KOG0286|consen 284 SGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSC--LGVSPDG 327 (343)
T ss_pred cccEEEeeecCCceeEeeccccceEEEeeccCCeeEE--EEECCCC
Confidence 9999999999999999999999999999998765544 4444443
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-30 Score=195.87 Aligned_cols=204 Identities=22% Similarity=0.355 Sum_probs=182.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
+...+..|+++|+.+.|+-+|+|.++++.|.+|++|+.. .+.++.++.+|..+|..++.+.|
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~------------------rg~liktYsghG~EVlD~~~s~D 70 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPL------------------RGALIKTYSGHGHEVLDAALSSD 70 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeeccc------------------ccceeeeecCCCceeeecccccc
Confidence 455678999999999999999999999999999999984 36788999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
...|++|+.|..+.+||+++++..+.+ .+|...|+.++|+.+...+++|+-|..+++|
T Consensus 71 nskf~s~GgDk~v~vwDV~TGkv~Rr~--rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V 148 (307)
T KOG0316|consen 71 NSKFASCGGDKAVQVWDVNTGKVDRRF--RGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGV 148 (307)
T ss_pred ccccccCCCCceEEEEEcccCeeeeec--ccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCce
Confidence 999999999999999999999876554 5688999999999999999999999999999
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+-.+..+++|+.||+++.||++.|....-.. +.+|++++|+++++..+.++.|+++++.|-.+|+.+..|+||
T Consensus 149 ~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~----g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGh 224 (307)
T KOG0316|consen 149 SSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYF----GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGH 224 (307)
T ss_pred eEEEecccEEEeeccCCcEEEEEeecceeehhhc----CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhccc
Confidence 3456789999999999999999998765543 247999999999999999999999999999999999999999
Q ss_pred CCcCceeeeee
Q psy15157 328 GSMGQQFELTL 338 (344)
Q Consensus 328 ~~~~~~~~~~~ 338 (344)
......+.-++
T Consensus 225 kn~eykldc~l 235 (307)
T KOG0316|consen 225 KNMEYKLDCCL 235 (307)
T ss_pred ccceeeeeeee
Confidence 87765554444
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-29 Score=224.38 Aligned_cols=197 Identities=29% Similarity=0.435 Sum_probs=176.5
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|...|++++|+|+++++++|+.|++|+|||+. .....++++.+|...|++++|+|+++
T Consensus 197 ~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~-----------------~~~~~~~~l~gH~~~v~~~~f~p~g~ 259 (456)
T KOG0266|consen 197 RELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLK-----------------DDGRNLKTLKGHSTYVTSVAFSPDGN 259 (456)
T ss_pred ccccccccceeeeEECCCCcEEEEecCCceEEEeecc-----------------CCCeEEEEecCCCCceEEEEecCCCC
Confidence 3457999999999999999999999999999999994 34577899999999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------- 250 (344)
++++|+.|++|+|||++++++...+ ..|...|++++|++++.+|++++.|+.+++|
T Consensus 260 ~i~Sgs~D~tvriWd~~~~~~~~~l--~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 337 (456)
T KOG0266|consen 260 LLVSGSDDGTVRIWDVRTGECVRKL--KGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPV 337 (456)
T ss_pred EEEEecCCCcEEEEeccCCeEEEee--eccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCce
Confidence 9999999999999999998766554 4688899999999999999999999999999
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC-ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG-AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+|++.++++++.|+.+++||+..+..+..+..+..+ ..+.+...++.++++++|+.|+.|++||+.++..+..+
T Consensus 338 ~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l 417 (456)
T KOG0266|consen 338 TSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRL 417 (456)
T ss_pred eEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhh
Confidence 588999999999999999999999999888755543 24555666889999999999999999999999999999
Q ss_pred ecCC
Q psy15157 325 TGAG 328 (344)
Q Consensus 325 ~~~~ 328 (344)
.+|.
T Consensus 418 ~~h~ 421 (456)
T KOG0266|consen 418 EGHS 421 (456)
T ss_pred cCCC
Confidence 9994
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-28 Score=217.43 Aligned_cols=199 Identities=19% Similarity=0.233 Sum_probs=157.9
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA- 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 191 (344)
.+.+|.+.|++++|+| ++++|++|+.|++|++||+.+.... ......+..+.+|...|.+++|+|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~-----------~~~~~~l~~L~gH~~~V~~l~f~P~~~ 138 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT-----------QNISDPIVHLQGHTKKVGIVSFHPSAM 138 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc-----------cccCcceEEecCCCCcEEEEEeCcCCC
Confidence 4689999999999999 8899999999999999999642110 01124567889999999999999986
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------- 251 (344)
++|++|+.|++|+|||+.+++.... ...|...|.+++|+|+|.+|++++.|+.+++|+
T Consensus 139 ~iLaSgs~DgtVrIWDl~tg~~~~~--l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~ 216 (493)
T PTZ00421 139 NVLASAGADMVVNVWDVERGKAVEV--IKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQR 216 (493)
T ss_pred CEEEEEeCCCEEEEEECCCCeEEEE--EcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceE
Confidence 6999999999999999998764433 345778899999999999999999999999993
Q ss_pred ----CCCCEEEEEe----CCCcEEEEeCCCCeE-EeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCeeE
Q psy15157 252 ----SDGRIYCSGS----KDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSARCL 321 (344)
Q Consensus 252 ----~~~~~l~~~~----~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~ 321 (344)
+++..+++++ .|+.|++||+++... ..... .+....+....|++++++|++++ .|+.|++||+.+++.+
T Consensus 217 ~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~-~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~ 295 (493)
T PTZ00421 217 CLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVD-LDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLT 295 (493)
T ss_pred EEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEec-cCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceE
Confidence 2334455543 478999999987643 33332 23333466778999999999887 5999999999999987
Q ss_pred EEeec
Q psy15157 322 IAYTG 326 (344)
Q Consensus 322 ~~~~~ 326 (344)
..+..
T Consensus 296 ~~~~~ 300 (493)
T PTZ00421 296 FCSSY 300 (493)
T ss_pred EEeec
Confidence 77654
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-29 Score=201.73 Aligned_cols=231 Identities=26% Similarity=0.419 Sum_probs=188.2
Q ss_pred CCCCccchhcccCC-CceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccc
Q psy15157 77 SIGLNPIQEILIGP-GLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKS 155 (344)
Q Consensus 77 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~ 155 (344)
+++.+|..+..+++ +.++.|..+..... ....+.+|++.|+|+.||.+|.+||||+.+|.|+||+..++
T Consensus 69 avsl~P~~~l~aTGGgDD~AflW~~~~ge------~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg---- 138 (399)
T KOG0296|consen 69 AVSLHPNNNLVATGGGDDLAFLWDISTGE------FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTG---- 138 (399)
T ss_pred EEEeCCCCceEEecCCCceEEEEEccCCc------ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccC----
Confidence 44566766665554 47777776654333 34457899999999999999999999999999999999653
Q ss_pred cCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC
Q psy15157 156 SMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235 (344)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 235 (344)
.....+......|.-+.|||.+.+|+.|+.||.+-+|.+.+....+.+ .+|..++++-.|.|+|
T Consensus 139 --------------~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~--~Gh~~~ct~G~f~pdG 202 (399)
T KOG0296|consen 139 --------------GEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVM--SGHNSPCTCGEFIPDG 202 (399)
T ss_pred --------------ceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEe--cCCCCCcccccccCCC
Confidence 333444456678899999999999999999999999999886444433 4688999999999999
Q ss_pred CEEEEEeCCCEEEEE-----------------------------------------------------------------
Q psy15157 236 DYMVVGTDHFVLRLY----------------------------------------------------------------- 250 (344)
Q Consensus 236 ~~l~~~~~~~~i~~~----------------------------------------------------------------- 250 (344)
+.++++..|++|++|
T Consensus 203 Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~ 282 (399)
T KOG0296|consen 203 KRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQ 282 (399)
T ss_pred ceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccc
Confidence 999999999999999
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+..=.+.|+|+.||+|-|||+...+..+.+. |.. .|..+.|.+ ..+|++++.+|.|+.||.|+|
T Consensus 283 e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~--he~-~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG 358 (399)
T KOG0296|consen 283 EELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE--HED-GVTKLKWLN-TDYLLTACANGKVRQWDARTG 358 (399)
T ss_pred hhhhhhhhhcccccccchhhcccccceEEEEecccchhheecc--CCC-ceEEEEEcC-cchheeeccCceEEeeecccc
Confidence 2233567899999999999998887666553 443 599999998 789999999999999999999
Q ss_pred eeEEEeecCCCcCceeeee
Q psy15157 319 RCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ 337 (344)
+++.+|.||......+.++
T Consensus 359 ~l~~~y~GH~~~Il~f~ls 377 (399)
T KOG0296|consen 359 QLKFTYTGHQMGILDFALS 377 (399)
T ss_pred ceEEEEecCchheeEEEEc
Confidence 9999999998876555443
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-28 Score=189.86 Aligned_cols=189 Identities=22% Similarity=0.354 Sum_probs=162.7
Q ss_pred ceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~ 188 (344)
....+.+|++.|+.++|+|- |..|||+|.|+.|+||+.... ....+...+ .+|+..|.+++|+
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~---------------~s~~ck~vld~~hkrsVRsvAws 70 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG---------------DSWTCKTVLDDGHKRSVRSVAWS 70 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC---------------CcEEEEEeccccchheeeeeeec
Confidence 34567899999999999997 889999999999999998621 122333333 4799999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
|.|++|++||.|.++.||.-..+.....-...+|...|.|++|+++|++|++|+.|..+-+|
T Consensus 71 p~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Ht 150 (312)
T KOG0645|consen 71 PHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHT 150 (312)
T ss_pred CCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccc
Confidence 99999999999999999998777665666677899999999999999999999999999998
Q ss_pred --------cCCCCEEEEEeCCCcEEEEeCC---CCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 --------SSDGRIYCSGSKDGDIKIWDGV---SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+|...+|+++|.|.+|++|+-. ...+++++.. |+ ..|.+++|++.|..|+++++|++++||-..
T Consensus 151 qDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g-~~-~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 151 QDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG-HE-NTVWSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred ccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecC-cc-ceEEEEEecCCCceEEEecCCcceEeeeec
Confidence 7888999999999999999866 3467888874 43 379999999999999999999999999854
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-28 Score=193.50 Aligned_cols=180 Identities=23% Similarity=0.421 Sum_probs=163.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-C
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-S 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~ 190 (344)
...+.+|++-+.|+.|-. ...++|+|-|.++.+||+++ ++.+..+.+|.+.|.+++++| +
T Consensus 138 ~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~------------------g~~~~~f~GH~gDV~slsl~p~~ 198 (343)
T KOG0286|consen 138 SRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIET------------------GQQTQVFHGHTGDVMSLSLSPSD 198 (343)
T ss_pred eeeecCccceeEEEEEcC-CCceEecCCCceEEEEEccc------------------ceEEEEecCCcccEEEEecCCCC
Confidence 345789999999999987 55789999999999999965 567889999999999999999 8
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
++.++||+.|++.++||++.+.+.+.+ .+|...|++++|.|+|.-+++|++|+++++|
T Consensus 199 ~ntFvSg~cD~~aklWD~R~~~c~qtF--~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gi 276 (343)
T KOG0286|consen 199 GNTFVSGGCDKSAKLWDVRSGQCVQTF--EGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGI 276 (343)
T ss_pred CCeEEecccccceeeeeccCcceeEee--cccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCc
Confidence 999999999999999999999766554 6788999999999999999999999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+..|++|++|..|.++.+||.-.++.+..+. +|+ +.|.++..+|||.-|++|+.|.+++||.
T Consensus 277 tSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~-GHe-NRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 277 TSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLA-GHE-NRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eeEEEcccccEEEeeecCCceeEeeccccceEEEee-ccC-CeeEEEEECCCCcEEEecchhHheeecC
Confidence 6789999999999999999999999888887 555 4799999999999999999999999994
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=200.23 Aligned_cols=183 Identities=28% Similarity=0.420 Sum_probs=163.1
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|.+.|+|+++.|...+|+||+.|++++|||+.+ +....++.+|...|..+++++...
T Consensus 145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlat------------------g~LkltltGhi~~vr~vavS~rHp 206 (460)
T KOG0285|consen 145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLAT------------------GQLKLTLTGHIETVRGVAVSKRHP 206 (460)
T ss_pred hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEccc------------------CeEEEeecchhheeeeeeecccCc
Confidence 45689999999999999999999999999999999964 567788999999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~ 272 (344)
++++++.|+.|+.||+...+.++.+ .+|-..|.|++.+|.-+ .+++|+.|.+++|||++
T Consensus 207 YlFs~gedk~VKCwDLe~nkvIR~Y--hGHlS~V~~L~lhPTld-------------------vl~t~grDst~RvWDiR 265 (460)
T KOG0285|consen 207 YLFSAGEDKQVKCWDLEYNKVIRHY--HGHLSGVYCLDLHPTLD-------------------VLVTGGRDSTIRVWDIR 265 (460)
T ss_pred eEEEecCCCeeEEEechhhhhHHHh--ccccceeEEEeccccce-------------------eEEecCCcceEEEeeec
Confidence 9999999999999999998776654 56888999999999544 44589999999999999
Q ss_pred CCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeee
Q psy15157 273 SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 273 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 336 (344)
+...+..+. +|. .+|.++.+.|-...+++|+.|++|++||++.|+.+.++..|....+.+++
T Consensus 266 tr~~V~~l~-GH~-~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~l 327 (460)
T KOG0285|consen 266 TRASVHVLS-GHT-NPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCL 327 (460)
T ss_pred ccceEEEec-CCC-CcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEec
Confidence 999999997 454 47999999998888999999999999999999999999998777666554
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=190.24 Aligned_cols=226 Identities=24% Similarity=0.349 Sum_probs=177.5
Q ss_pred cccCCCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCc
Q psy15157 72 KRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRM 151 (344)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~ 151 (344)
++..++++..|.++.++....+-........ ....-.+..+.||...|.|++||++|++|||++.|++|-||.+..
T Consensus 61 krsVRsvAwsp~g~~La~aSFD~t~~Iw~k~---~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~de- 136 (312)
T KOG0645|consen 61 KRSVRSVAWSPHGRYLASASFDATVVIWKKE---DGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDE- 136 (312)
T ss_pred hheeeeeeecCCCcEEEEeeccceEEEeecC---CCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecC-
Confidence 4455666777777766666544322221111 122334678899999999999999999999999999999999863
Q ss_pred cccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-CCccccceeeeccccceEEEE
Q psy15157 152 LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS-KSSVRKAHKTIQESTFVRCLS 230 (344)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~ 230 (344)
.....+...+..|.+.|..+.|||...+|+|++.|.+|++|+-. ...........+|...|.+++
T Consensus 137 --------------ddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~ 202 (312)
T KOG0645|consen 137 --------------DDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLA 202 (312)
T ss_pred --------------CCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEE
Confidence 24467788999999999999999999999999999999999977 444444455667888999999
Q ss_pred EecCCCEEEEEeCCCEEEEEc-----------------CCCCEEEEEeCCCcEEEEeCCCC------eEEeeecccCCCc
Q psy15157 231 FHPCGDYMVVGTDHFVLRLYS-----------------SDGRIYCSGSKDGDIKIWDGVSS------KCVATFSKAHDGA 287 (344)
Q Consensus 231 ~~~~~~~l~~~~~~~~i~~~~-----------------~~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~~ 287 (344)
|++.|..+++++.|+++++|. -....+++++.|+.|++|..... +.+......|..
T Consensus 203 F~~~G~rl~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~- 281 (312)
T KOG0645|consen 203 FDNIGSRLVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEV- 281 (312)
T ss_pred ecCCCceEEEecCCcceEeeeeccCcchhcccceEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhccccc-
Confidence 999999999999999999992 12357899999999999976542 222233445654
Q ss_pred cEEEEEEccC-CCEEEEEeCCCcEEEEEcC
Q psy15157 288 EISSLTFTRN-GKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 288 ~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~ 316 (344)
.|+++.|+|. .+.|++|++||.|++|.+.
T Consensus 282 dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 282 DVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred ccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 7999999994 7789999999999999874
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=185.02 Aligned_cols=195 Identities=21% Similarity=0.369 Sum_probs=165.6
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...++....+.|+.+.+.|+++.||+|+. -.||+||+++ ....++.++.+|...|+++.|..+
T Consensus 32 C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S----------------~np~Pv~t~e~h~kNVtaVgF~~d 94 (311)
T KOG0315|consen 32 CSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNS----------------NNPNPVATFEGHTKNVTAVGFQCD 94 (311)
T ss_pred EEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccC----------------CCCCceeEEeccCCceEEEEEeec
Confidence 34455556788999999999999999975 4699999974 233478999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
|++++||+.||+++|||++...+.+. ..+..+|+++..+|+...|++|..+|.|++|
T Consensus 95 grWMyTgseDgt~kIWdlR~~~~qR~---~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~ 171 (311)
T KOG0315|consen 95 GRWMYTGSEDGTVKIWDLRSLSCQRN---YQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQ 171 (311)
T ss_pred CeEEEecCCCceEEEEeccCcccchh---ccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCccee
Confidence 99999999999999999998655443 4567899999999999999999999999999
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCe------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC-e
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSK------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-R 319 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-~ 319 (344)
.++|.+++.+...|..++|++-... ++..+. .|. +.+..+.+|||+++|+++|.|.+++||++.+- +
T Consensus 172 sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~-ah~-~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~k 249 (311)
T KOG0315|consen 172 SLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQ-AHN-GHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFK 249 (311)
T ss_pred eEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhhee-ccc-ceEEEEEECCCCcEEEeecCCceEEEEecCCcee
Confidence 6899999999999999999987643 334444 555 46999999999999999999999999999887 5
Q ss_pred eEEEeecC
Q psy15157 320 CLIAYTGA 327 (344)
Q Consensus 320 ~~~~~~~~ 327 (344)
.-..+++|
T Consensus 250 le~~l~gh 257 (311)
T KOG0315|consen 250 LELVLTGH 257 (311)
T ss_pred eEEEeecC
Confidence 55566666
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=217.39 Aligned_cols=199 Identities=33% Similarity=0.593 Sum_probs=171.9
Q ss_pred eEEecC-CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 113 AYVTSH-KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 113 ~~~~~h-~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..+.+| ...|.|+.|+++|+++++++.|+.+++|+..+... .....+.+|...|.+++|+|++
T Consensus 152 ~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~----------------~~~~~l~~h~~~v~~~~fs~d~ 215 (456)
T KOG0266|consen 152 QTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS----------------NLLRELSGHTRGVSDVAFSPDG 215 (456)
T ss_pred eeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc----------------hhhccccccccceeeeEECCCC
Confidence 334344 88999999999999999999999999999853210 2455568999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCC-ccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKS-SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
.++++++.|++|+|||+... ...+.+ .+|...|++++|+|+|+.+++|+.|+.|++|
T Consensus 216 ~~l~s~s~D~tiriwd~~~~~~~~~~l--~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~ 293 (456)
T KOG0266|consen 216 SYLLSGSDDKTLRIWDLKDDGRNLKTL--KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISG 293 (456)
T ss_pred cEEEEecCCceEEEeeccCCCeEEEEe--cCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEE
Confidence 99999999999999999443 443333 4799999999999999999999999999999
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCe--EEeeecccCCCc-cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSK--CVATFSKAHDGA-EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~-~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+++++++++++.|+.|++||+.++. +...+... ... +++++.|+|++.++++++.|+.+++||++.+.++..+
T Consensus 294 ~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~ 372 (456)
T KOG0266|consen 294 LAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGA-ENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTY 372 (456)
T ss_pred EEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCC-CCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeee
Confidence 6899999999999999999999998 45666533 333 6999999999999999999999999999999999999
Q ss_pred ecCCCc
Q psy15157 325 TGAGSM 330 (344)
Q Consensus 325 ~~~~~~ 330 (344)
.+|...
T Consensus 373 ~~~~~~ 378 (456)
T KOG0266|consen 373 TGHSNL 378 (456)
T ss_pred cccCCc
Confidence 999775
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=202.89 Aligned_cols=211 Identities=19% Similarity=0.283 Sum_probs=174.0
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec---CCcCCeEEEEEc
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY---DHIEEVTCLEFH 188 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~ 188 (344)
...+..|..-|+|+.|+|||.+|||++.||+|.+||=.+ ++.+..+. +|.+.|.+++|+
T Consensus 183 k~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGkt------------------ge~vg~l~~~~aHkGsIfalsWs 244 (603)
T KOG0318|consen 183 KSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKT------------------GEKVGELEDSDAHKGSIFALSWS 244 (603)
T ss_pred eecccccccceeeEEECCCCCeEEEecCCccEEEEcCCC------------------ccEEEEecCCCCccccEEEEEEC
Confidence 445678999999999999999999999999999999754 34444554 899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccce-----------------------------------------eeeccccceE
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAH-----------------------------------------KTIQESTFVR 227 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----------------------------------------~~~~~~~~v~ 227 (344)
||+..|+|++.|.+++|||+.+.++.+.+ ...+|...|+
T Consensus 245 PDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~IT 324 (603)
T KOG0318|consen 245 PDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSIT 324 (603)
T ss_pred CCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheeccccccee
Confidence 99999999999999999998776543322 1235778899
Q ss_pred EEEEecCCCEEEEEeCCCEEEEE---------------------------------------------------------
Q psy15157 228 CLSFHPCGDYMVVGTDHFVLRLY--------------------------------------------------------- 250 (344)
Q Consensus 228 ~~~~~~~~~~l~~~~~~~~i~~~--------------------------------------------------------- 250 (344)
++..+|++++|++|+.||.|.-|
T Consensus 325 aLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~l 404 (603)
T KOG0318|consen 325 ALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKL 404 (603)
T ss_pred EEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeec
Confidence 99999999999999999999999
Q ss_pred -----------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeec-c
Q psy15157 251 -----------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-K 282 (344)
Q Consensus 251 -----------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~ 282 (344)
+|++..++.|+.|+.|+||.+..+....... .
T Consensus 405 g~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~ 484 (603)
T KOG0318|consen 405 GSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLL 484 (603)
T ss_pred CCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeee
Confidence 7899999999999999999998766433322 2
Q ss_pred cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE-eecCCCcCceeeeeeeccCC
Q psy15157 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA-YTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 283 ~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 343 (344)
.|. ++|++++++||+.||++|...+.+.+||+.+.+.... +..| ..+..+++++++.+
T Consensus 485 ~h~-a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FH--takI~~~aWsP~n~ 543 (603)
T KOG0318|consen 485 EHR-AAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFH--TAKINCVAWSPNNK 543 (603)
T ss_pred ccc-CCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeee--eeeEEEEEeCCCce
Confidence 343 6799999999999999999999999999999877332 3334 34566777777643
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=207.92 Aligned_cols=194 Identities=22% Similarity=0.403 Sum_probs=168.2
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
..-+.+|..+.|.|+|+.|++|+..|.+.+|+... ......++.|.++|.++.|++++.+++
T Consensus 93 NKvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~------------------fnFEtilQaHDs~Vr~m~ws~~g~wmi 154 (464)
T KOG0284|consen 93 NKVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS------------------FNFETILQAHDSPVRTMKWSHNGTWMI 154 (464)
T ss_pred cccccceeeEEEcCCCceeEeecccccEEEecCce------------------eeHHHHhhhhcccceeEEEccCCCEEE
Confidence 34467899999999999999999999999998742 112235678999999999999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cC
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SS 252 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~ 252 (344)
||+.+|.|++|+.+..... .+. ..|...|++++|+|+...+++|++|++|++| +|
T Consensus 155 SgD~gG~iKyWqpnmnnVk-~~~-ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP 232 (464)
T KOG0284|consen 155 SGDKGGMIKYWQPNMNNVK-IIQ-AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHP 232 (464)
T ss_pred EcCCCceEEecccchhhhH-Hhh-HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCC
Confidence 9999999999998765432 221 2355789999999999999999999999998 67
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
...++++|+.|..|++||.+++.++.++.. |. ..|.++.|+|++++|+++|.|..++++|+++-+.+.+|++|..-.
T Consensus 233 ~kgLiasgskDnlVKlWDprSg~cl~tlh~-HK-ntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv 309 (464)
T KOG0284|consen 233 TKGLIASGSKDNLVKLWDPRSGSCLATLHG-HK-NTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDV 309 (464)
T ss_pred ccceeEEccCCceeEeecCCCcchhhhhhh-cc-ceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhh
Confidence 888999999999999999999999999963 43 469999999999999999999999999999999999999886543
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=212.62 Aligned_cols=194 Identities=23% Similarity=0.376 Sum_probs=167.9
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+|...++|+++||||+++|||+.||.|+|||..+ +-+..++..|++.|+.+.|+..++.+
T Consensus 346 QQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~S------------------gfC~vTFteHts~Vt~v~f~~~g~~l 407 (893)
T KOG0291|consen 346 QQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQS------------------GFCFVTFTEHTSGVTAVQFTARGNVL 407 (893)
T ss_pred ccccccceeeEEECCCCcEEEeccCCCcEEEEeccC------------------ceEEEEeccCCCceEEEEEEecCCEE
Confidence 369999999999999999999999999999999853 56788999999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccce------------------------------------------eeeccccceEEEEEe
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAH------------------------------------------KTIQESTFVRCLSFH 232 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~------------------------------------------~~~~~~~~v~~~~~~ 232 (344)
++++.||+|+.||+...+.-+++ ...+|.++|.+++|+
T Consensus 408 lssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~ 487 (893)
T KOG0291|consen 408 LSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFS 487 (893)
T ss_pred EEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEc
Confidence 99999999999997554322211 123578899999999
Q ss_pred cCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc------
Q psy15157 233 PCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA------ 283 (344)
Q Consensus 233 ~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------ 283 (344)
|.|..|++++.|.+|++| .|+|+.++++..||.|.+||...+..+..+.+.
T Consensus 488 ~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~g 567 (893)
T KOG0291|consen 488 PDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGG 567 (893)
T ss_pred cccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhcccc
Confidence 999999999999999999 799999999999999999998877665444211
Q ss_pred ------------CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 284 ------------HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 284 ------------~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
..+...+.+++++||.+|++||....|++||++++-.++.|+-
T Consensus 568 R~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfqi 622 (893)
T KOG0291|consen 568 RKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKFQI 622 (893)
T ss_pred ccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeEEe
Confidence 1224689999999999999999999999999999999988864
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-29 Score=208.86 Aligned_cols=202 Identities=20% Similarity=0.366 Sum_probs=171.8
Q ss_pred ccceeEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 109 QYETAYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 109 ~~~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
......+.||+..|+++.|.| .+.+|++|+.|+.|+||++- ....+++++.+|..+|.+++|
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy-----------------~~~~~lrtf~gH~k~Vrd~~~ 266 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVY-----------------DDRRCLRTFKGHRKPVRDASF 266 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEe-----------------cCcceehhhhcchhhhhhhhc
Confidence 334567899999999999999 89999999999999999995 447889999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC-CEEEEEeCCCEEEEE----------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG-DYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~~---------------- 250 (344)
+++|..|+|++.|+.|++||+++|++...+. ....++|+.|+|++ +.+++|+.|+.|+.|
T Consensus 267 s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~---~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg 343 (503)
T KOG0282|consen 267 NNCGTSFLSASFDRFLKLWDTETGQVLSRFH---LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLG 343 (503)
T ss_pred cccCCeeeeeecceeeeeeccccceEEEEEe---cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhh
Confidence 9999999999999999999999998765554 45678999999998 889999999999999
Q ss_pred -------cCCCCEEEEEeCCCcEEEEeCCCCeEEee--------------------------------------------
Q psy15157 251 -------SSDGRIYCSGSKDGDIKIWDGVSSKCVAT-------------------------------------------- 279 (344)
Q Consensus 251 -------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-------------------------------------------- 279 (344)
-++|+++++.+.|++++||+.+.+-.+..
T Consensus 344 ~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkk 423 (503)
T KOG0282|consen 344 AILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKK 423 (503)
T ss_pred heeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHh
Confidence 47899999999999999999665432111
Q ss_pred --ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 280 --FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 280 --~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
+.++.-.+.-..+.|||||++|++|+.||.+.+||.++-+.+..++.|..+
T Consensus 424 K~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ 476 (503)
T KOG0282|consen 424 KRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQP 476 (503)
T ss_pred hhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcc
Confidence 011111233567899999999999999999999999999999999998443
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-28 Score=190.90 Aligned_cols=208 Identities=25% Similarity=0.378 Sum_probs=173.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+.+|++.|+.+.|+|+|.+||||+.|..|.+|++. ...+-...+++|.++|..+.|.+++..
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~-----------------gdceN~~~lkgHsgAVM~l~~~~d~s~ 104 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVY-----------------GDCENFWVLKGHSGAVMELHGMRDGSH 104 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEecc-----------------ccccceeeeccccceeEeeeeccCCCE
Confidence 367999999999999999999999999999999974 223445677899999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~---------------------- 250 (344)
+++++.|.+|+.||+++++..+.+ ..|...++++..+.-|. .+.+++.|+++++|
T Consensus 105 i~S~gtDk~v~~wD~~tG~~~rk~--k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f 182 (338)
T KOG0265|consen 105 ILSCGTDKTVRGWDAETGKRIRKH--KGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGF 182 (338)
T ss_pred EEEecCCceEEEEecccceeeehh--ccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEe
Confidence 999999999999999999776555 45788888888555554 45678899999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC----CeeEEEeec
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS----ARCLIAYTG 326 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~ 326 (344)
...+..+.+|+-|+.|++||++.......+.+ |. .+|+.+..+|+|.++.+-+.|.++++||++. .+++..|.+
T Consensus 183 ~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsG-h~-DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g 260 (338)
T KOG0265|consen 183 KDTSDQVISGGIDNDIKVWDLRKNDGLYTLSG-HA-DTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQG 260 (338)
T ss_pred cccccceeeccccCceeeeccccCcceEEeec-cc-CceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeec
Confidence 34566778999999999999999999999984 44 3799999999999999999999999999975 567999998
Q ss_pred CCCcC--ceeeeeeeccC
Q psy15157 327 AGSMG--QQFELTLTVDA 342 (344)
Q Consensus 327 ~~~~~--~~~~~~~~~~~ 342 (344)
|...- ..+..+++++.
T Consensus 261 ~~hnfeknlL~cswsp~~ 278 (338)
T KOG0265|consen 261 HIHNFEKNLLKCSWSPNG 278 (338)
T ss_pred chhhhhhhcceeeccCCC
Confidence 75432 33444455443
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=202.73 Aligned_cols=206 Identities=24% Similarity=0.436 Sum_probs=179.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
++..+.+|..+|+.+-|+|+-..+++++.|++|++||..+ ++..+.+++|...+.+++|+..
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~t------------------g~~e~~LrGHt~sv~di~~~a~ 161 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTET------------------GELERSLRGHTDSVFDISFDAS 161 (406)
T ss_pred chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccc------------------hhhhhhhhccccceeEEEEecC
Confidence 4456789999999999999999999999999999999965 4557789999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
|+++++++.|-.+++||..+.. .......+|...|.++.|-|.|+++++++.|.+|+.|
T Consensus 162 Gk~l~tcSsDl~~~LWd~~~~~-~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~ 240 (406)
T KOG0295|consen 162 GKYLATCSSDLSAKLWDFDTFF-RCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRM 240 (406)
T ss_pred ccEEEecCCccchhheeHHHHH-HHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEE
Confidence 9999999999999999998731 1222335677889999999999999999999999999
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC---------------CCEEEEEeCCCcEEE
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN---------------GKYLLSSGKDSLVKL 312 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~---------------~~~l~s~~~dg~i~v 312 (344)
..||.++++++.|.++++|-..++.+...+.. |+ .+|-+++|-|. ++++.+++.|++|++
T Consensus 241 v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~-hE-h~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~ 318 (406)
T KOG0295|consen 241 VRVNQDGTIIASCSNDQTLRVWVVATKQCKAELRE-HE-HPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKI 318 (406)
T ss_pred EEecCCeeEEEecCCCceEEEEEeccchhhhhhhc-cc-cceEEEEecccccCcchhhccCCCCCccEEEeecccceEEE
Confidence 67899999999999999999999988888874 33 47999999774 358999999999999
Q ss_pred EEcCCCeeEEEeecCCCcCceeeee
Q psy15157 313 WELSSARCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 313 wd~~~~~~~~~~~~~~~~~~~~~~~ 337 (344)
||+.+|.|+.++.||..-.+.+.|+
T Consensus 319 wdv~tg~cL~tL~ghdnwVr~~af~ 343 (406)
T KOG0295|consen 319 WDVSTGMCLFTLVGHDNWVRGVAFS 343 (406)
T ss_pred EeccCCeEEEEEecccceeeeeEEc
Confidence 9999999999999998777666554
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=199.04 Aligned_cols=313 Identities=21% Similarity=0.251 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCC-----CCCCchHHHHHHHhhhccCcccccccCCCCCC-----------
Q psy15157 17 QEALYRLIISQLYYDGHHPMAITLQSSCNVVE-----PCPPSDRLSQLVHIGLAHEPDRMKRMEPSIGL----------- 80 (344)
Q Consensus 17 ~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~-----~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~----------- 80 (344)
..+++.|++++|...|+...|-+++.|.+... ...|+..|..+++++|.|...+..........
T Consensus 5 sdEvN~LV~RYLqE~G~~hsaftf~~Et~is~~n~~~~~vp~gaLi~ivQKGLqY~E~E~~~~~~~~v~d~~~e~~~~~d 84 (524)
T KOG0273|consen 5 SDEVNFLVWRYLQESGFSHSAFTFGIETGISQSNINGSLVPPGALISIVQKGLQYVEAEKHLNESGVVFDAPIESLSLED 84 (524)
T ss_pred HHHHHHHHHHHHHHcCcceeeEEeeecccccccCCCccccChHHHHHHHHhhhhhhheeeeeccCCccccccccccchhh
Confidence 57899999999999999999999998766533 35678899999999998764332211110000
Q ss_pred ----ccc--h----------hccc---------C-------CC----cee--eecC--C--CCCCCC-----C-------
Q psy15157 81 ----NPI--Q----------EILI---------G-------PG----LDL--EFES--D--VDPSAP-----E------- 106 (344)
Q Consensus 81 ----~~~--~----------~~~~---------~-------~~----~~~--~~~~--~--~~~~~~-----~------- 106 (344)
++. . +... . .+ .+. ..+. + ..+..+ .
T Consensus 85 ~v~~~~~ql~~~~~~e~~s~~~~~~~~~~~~~~~~~s~s~~ag~~~~~d~a~~~er~~n~eed~a~~I~~~~e~~~i~~~ 164 (524)
T KOG0273|consen 85 LVMEDVVQLRQQAFREKLSEEQFCAQLKIAQDKESGSTSTPAGSISQRDGAKTGERTSNGEEDKAMSIDVHTEPMEIDGG 164 (524)
T ss_pred hccccccccchhhhhhhccccchhhhhhhhhhhccCCcCCCCCccccccchhhcchhcccccCccccccccccceeeccc
Confidence 000 0 0000 0 00 000 0000 0 000000 0
Q ss_pred --CCccceeEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCC-CceEEEecCCcCCe
Q psy15157 107 --PAQYETAYVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQG-HPVIRTLYDHIEEV 182 (344)
Q Consensus 107 --~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v 182 (344)
.+...... ..|..+|.+++|+|-.. .+++|+.|-..++|++........ .+..... ...-..-..-...|
T Consensus 165 ~~I~~~~~kv-l~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~-----~q~~lrh~~~~~~~s~~~nkdV 238 (524)
T KOG0273|consen 165 VEIPSSKAKV-LRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGS-----TQLVLRHCIREGGKSVPSNKDV 238 (524)
T ss_pred ccccccceee-ccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccc-----hhhhhhhhhhhhcccCCccCCc
Confidence 01111133 34999999999999665 999999999999999963100000 0000000 00000001124579
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------
Q psy15157 183 TCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 183 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------ 250 (344)
++++|+.+|..|++|+.||.+++|+.... ... ....|.++|.++.|+..|.||++++-|+++.+|
T Consensus 239 T~L~Wn~~G~~LatG~~~G~~riw~~~G~-l~~--tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~ 315 (524)
T KOG0273|consen 239 TSLDWNNDGTLLATGSEDGEARIWNKDGN-LIS--TLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFE 315 (524)
T ss_pred ceEEecCCCCeEEEeecCcEEEEEecCch-hhh--hhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeee
Confidence 99999999999999999999999997654 333 335689999999999999999999999999998
Q ss_pred ----------------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 251 ----------------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 251 ----------------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
+|.|.+|+++|.|++++||+.....+..
T Consensus 316 ~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~ 395 (524)
T KOG0273|consen 316 FHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVH 395 (524)
T ss_pred eccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchh
Confidence 6889999999999999999999998888
Q ss_pred eecccCCCccEEEEEEccCC---------CEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 279 TFSKAHDGAEISSLTFTRNG---------KYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 279 ~~~~~~~~~~v~~i~~~~~~---------~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.+. .|. ..|..+.|+|+| ..+++++.|++|++||+..|.++++|..|+.+...+ .|++++
T Consensus 396 ~l~-~Hs-kei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysv--afS~~g 464 (524)
T KOG0273|consen 396 DLQ-AHS-KEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSV--AFSPNG 464 (524)
T ss_pred hhh-hhc-cceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEE--EecCCC
Confidence 887 454 369999999975 368999999999999999999999999998776554 444444
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=201.33 Aligned_cols=189 Identities=23% Similarity=0.448 Sum_probs=166.1
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
....|.|+++. ...+++|..|.+|+|||.++ ..+...+.||++.|.|+.|.. +.+++|
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~------------------~~c~~~L~GHtGSVLCLqyd~--rviisG 253 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNS------------------LECLKILTGHTGSVLCLQYDE--RVIVSG 253 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEecccc------------------HHHHHhhhcCCCcEEeeeccc--eEEEec
Confidence 45679999985 66899999999999999864 456778999999999999864 499999
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------cCC
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------SSD 253 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------~~~ 253 (344)
+.|.+|++||+++++...++ .+|...|..+.|+ +.++++++.|..+++| +-+
T Consensus 254 SSDsTvrvWDv~tge~l~tl--ihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd 329 (499)
T KOG0281|consen 254 SSDSTVRVWDVNTGEPLNTL--IHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 329 (499)
T ss_pred CCCceEEEEeccCCchhhHH--hhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc
Confidence 99999999999999876654 5688889999995 5799999999999999 457
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCce
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 333 (344)
.+++++++.|.+|++|++.+++++.++.+ |.. .|.|+.+ .|+++++|+.|.+|++||+..|.+++.++||....++
T Consensus 330 ~kyIVsASgDRTikvW~~st~efvRtl~g-HkR-GIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRc 405 (499)
T KOG0281|consen 330 DKYIVSASGDRTIKVWSTSTCEFVRTLNG-HKR-GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 405 (499)
T ss_pred cceEEEecCCceEEEEeccceeeehhhhc-ccc-cceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhh
Confidence 78999999999999999999999999974 443 4888877 5899999999999999999999999999999988887
Q ss_pred eee
Q psy15157 334 FEL 336 (344)
Q Consensus 334 ~~~ 336 (344)
+.|
T Consensus 406 iRF 408 (499)
T KOG0281|consen 406 IRF 408 (499)
T ss_pred eee
Confidence 765
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-26 Score=185.30 Aligned_cols=217 Identities=22% Similarity=0.296 Sum_probs=176.6
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC--------------------------CcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE--------------------------PQNDQQ 167 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~--------------------------~~~~~~ 167 (344)
.+..-.+.|+++.|+++|.++++++.|.+++|||..++.......... ......
T Consensus 9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~ 88 (311)
T KOG1446|consen 9 VFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH 88 (311)
T ss_pred ccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence 345567899999999999999999999999999998764433322211 112345
Q ss_pred CCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE
Q psy15157 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 168 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i 247 (344)
..+.++.+.||...|++++.+|-+..++|++.|++|++||++..++...+.. ..-...+|+|.|-++|++.....|
T Consensus 89 dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~----~~~pi~AfDp~GLifA~~~~~~~I 164 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL----SGRPIAAFDPEGLIFALANGSELI 164 (311)
T ss_pred cCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec----CCCcceeECCCCcEEEEecCCCeE
Confidence 5778999999999999999999999999999999999999997765443332 223457999999999999999899
Q ss_pred EEE----------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCc-cEEEEEEccCC
Q psy15157 248 RLY----------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA-EISSLTFTRNG 298 (344)
Q Consensus 248 ~~~----------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~i~~~~~~ 298 (344)
++| +++|++++.+...+.+++.|.-+|.....+....... ---..+|+||+
T Consensus 165 kLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds 244 (311)
T KOG1446|consen 165 KLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDS 244 (311)
T ss_pred EEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCC
Confidence 997 8999999999999999999999999888887443322 12467899999
Q ss_pred CEEEEEeCCCcEEEEEcCCCeeEEEeecC-CCcCcee
Q psy15157 299 KYLLSSGKDSLVKLWELSSARCLIAYTGA-GSMGQQF 334 (344)
Q Consensus 299 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~ 334 (344)
+++++|++||+|.+|++++|+.+..+++. .....++
T Consensus 245 ~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~ 281 (311)
T KOG1446|consen 245 KFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCV 281 (311)
T ss_pred cEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCcccc
Confidence 99999999999999999999999999995 4444333
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=215.03 Aligned_cols=224 Identities=21% Similarity=0.375 Sum_probs=183.4
Q ss_pred CCCCCCccchhcccCCCceeee-cCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccc
Q psy15157 75 EPSIGLNPIQEILIGPGLDLEF-ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLA 153 (344)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~ 153 (344)
++.+++.|...+++..-.+-.. ..+.. + ......+.+|.++|+.++|+|++.+|++|+.|-.|+||+..
T Consensus 12 vKglsFHP~rPwILtslHsG~IQlWDYR--M----~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk---- 81 (1202)
T KOG0292|consen 12 VKGLSFHPKRPWILTSLHSGVIQLWDYR--M----GTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK---- 81 (1202)
T ss_pred ccceecCCCCCEEEEeecCceeeeehhh--h----hhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc----
Confidence 4467888888887765322111 11100 0 01112357999999999999999999999999999999985
Q ss_pred cccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec
Q psy15157 154 KSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233 (344)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 233 (344)
..+++.++.+|.+-|..+.||+.-.+++|+|.|.+|+||++.+++++... .+|...|.|.+|+|
T Consensus 82 --------------~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavl--tGHnHYVMcAqFhp 145 (1202)
T KOG0292|consen 82 --------------TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVL--TGHNHYVMCAQFHP 145 (1202)
T ss_pred --------------cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEE--ecCceEEEeeccCC
Confidence 36778899999999999999999999999999999999999998776555 57889999999999
Q ss_pred CCCEEEEEeCCCEEEEE----------------------------------------------------cCCCCEEEEEe
Q psy15157 234 CGDYMVVGTDHFVLRLY----------------------------------------------------SSDGRIYCSGS 261 (344)
Q Consensus 234 ~~~~l~~~~~~~~i~~~----------------------------------------------------~~~~~~l~~~~ 261 (344)
..+.+++++-|.+|++| .|.-.++++|+
T Consensus 146 tEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~ 225 (1202)
T KOG0292|consen 146 TEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGA 225 (1202)
T ss_pred ccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecC
Confidence 99999999999999999 45557899999
Q ss_pred CCCcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 262 KDGDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 262 ~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.|..|++|.+...+. +-+.. +|. +.|.++-|+|....+++.|+|++|+|||+...+.+.+|+.
T Consensus 226 DDRqVKlWrmnetKaWEvDtcr-gH~-nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrr 290 (1202)
T KOG0292|consen 226 DDRQVKLWRMNETKAWEVDTCR-GHY-NNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRR 290 (1202)
T ss_pred CcceeeEEEeccccceeehhhh-ccc-CCcceEEecCccceeEecCCCccEEEEecccccceeeeec
Confidence 999999999876542 22333 444 4699999999999999999999999999999999988843
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-26 Score=206.41 Aligned_cols=216 Identities=14% Similarity=0.148 Sum_probs=158.8
Q ss_pred ceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
....+.+|.+.|.+++|+|+ +++||||+.||+|+|||+.+..... .....++..+.+|...|.+++|+|
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~----------~~i~~p~~~L~gH~~~V~sVaf~P 135 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESV----------KEIKDPQCILKGHKKKISIIDWNP 135 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccc----------cccccceEEeecCCCcEEEEEECC
Confidence 35567899999999999996 7899999999999999996421100 000124556789999999999999
Q ss_pred CCCE-EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc-----------------
Q psy15157 190 SAPI-LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS----------------- 251 (344)
Q Consensus 190 ~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~----------------- 251 (344)
++.. |++++.|++|++||+++++....+ .+...|.+++|+|+|.+|++++.|+.+++|+
T Consensus 136 ~g~~iLaSgS~DgtIrIWDl~tg~~~~~i---~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~ 212 (568)
T PTZ00420 136 MNYYIMCSSGFDSFVNIWDIENEKRAFQI---NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGK 212 (568)
T ss_pred CCCeEEEEEeCCCeEEEEECCCCcEEEEE---ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCc
Confidence 8874 579999999999999987643322 2456799999999999999999999999991
Q ss_pred -----------CCCCEEEEEeCCC----cEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 252 -----------SDGRIYCSGSKDG----DIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 252 -----------~~~~~l~~~~~dg----~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
+++.++++++.|+ .|+|||++. ++++..+......+.+......++|.++++|+.|+.|++|++
T Consensus 213 ~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~ 292 (568)
T PTZ00420 213 NTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQH 292 (568)
T ss_pred eeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEc
Confidence 4667788877774 799999995 556655532222223333434556889999999999999999
Q ss_pred CCCeeEEEeecCCCcCceeeeeeec
Q psy15157 316 SSARCLIAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (344)
..+. +..+....+....-.+.+.|
T Consensus 293 ~~~~-~~~l~~~~s~~p~~g~~f~P 316 (568)
T PTZ00420 293 SLGS-IRKVNEYKSCSPFRSFGFLP 316 (568)
T ss_pred cCCc-EEeecccccCCCccceEEcc
Confidence 8774 34444333333333444444
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=196.27 Aligned_cols=178 Identities=29% Similarity=0.450 Sum_probs=158.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.|...|++++|||+...|+|+|.||+|+|||... ....+.+.+|.-.|.+++|+|...++++
T Consensus 178 hh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~------------------~kee~vL~GHgwdVksvdWHP~kgLias 239 (464)
T KOG0284|consen 178 HHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM------------------PKEERVLRGHGWDVKSVDWHPTKGLIAS 239 (464)
T ss_pred hhhhhhheeccCCCCceeEEecCCCeEEEEeccC------------------CchhheeccCCCCcceeccCCccceeEE
Confidence 3459999999999999999999999999999853 2334566999999999999999999999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------------C
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------------S 252 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------------~ 252 (344)
||.|..|++||.++++++..+ ..|...|..+.|+|++++|++++.|..+++|+ -
T Consensus 240 gskDnlVKlWDprSg~cl~tl--h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~ 317 (464)
T KOG0284|consen 240 GSKDNLVKLWDPRSGSCLATL--HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPL 317 (464)
T ss_pred ccCCceeEeecCCCcchhhhh--hhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccc
Confidence 999999999999999876554 56888899999999999999999999999982 2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
...+|.+|+.||.|..|.+...+++..+..+|.+ .|.+++|+|=|.+|++|+.|.++++|.-
T Consensus 318 ~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~-~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 318 NESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDG-EIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cccceeeccCCCceEEEeccccccccCCCccccc-ceeeeeccccceeEeecCCCcceeeecc
Confidence 4578899999999999999988888888877775 6999999999999999999999999964
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=207.76 Aligned_cols=202 Identities=23% Similarity=0.409 Sum_probs=172.8
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.||++.|.++....+|.+|+|||.|.++++|.+++.. ....++....+|.+.|.+++++..+
T Consensus 358 c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~--------------~~~~~~a~~~gH~~svgava~~~~~ 423 (775)
T KOG0319|consen 358 CQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNC--------------SKSLCVAQANGHTNSVGAVAGSKLG 423 (775)
T ss_pred eEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCc--------------chhhhhhhhcccccccceeeecccC
Confidence 34789999999999977788999999999999999985321 2233455668999999999998766
Q ss_pred C-EEEEEeCCCcEEEEEcCCCcccc-------ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------
Q psy15157 192 P-ILASGSKDKTVKMFDYSKSSVRK-------AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------- 250 (344)
Q Consensus 192 ~-~l~s~~~dg~i~iwd~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------- 250 (344)
. +|+++|.|+++++|++...+... ......|...|+|++++|+.+.+++|+.|.+.++|
T Consensus 424 asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG 503 (775)
T KOG0319|consen 424 ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG 503 (775)
T ss_pred ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC
Confidence 4 99999999999999998722111 11223478889999999999999999999999999
Q ss_pred ----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 251 ----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 251 ----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
++..+.++|+|.|++|+||.+.+..|+.++. +|. ..|..+.|-.+|+.|++++.||.|++|++++++|
T Consensus 504 H~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~e-GH~-~aVlra~F~~~~~qliS~~adGliKlWnikt~eC 581 (775)
T KOG0319|consen 504 HTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFE-GHT-SAVLRASFIRNGKQLISAGADGLIKLWNIKTNEC 581 (775)
T ss_pred CccceEEEEeccccceeEeccCCceEEEEEeccceeeeeec-Ccc-ceeEeeeeeeCCcEEEeccCCCcEEEEeccchhh
Confidence 6788899999999999999999999999998 454 4699999999999999999999999999999999
Q ss_pred EEEeecCCC
Q psy15157 321 LIAYTGAGS 329 (344)
Q Consensus 321 ~~~~~~~~~ 329 (344)
+.++..|..
T Consensus 582 ~~tlD~H~D 590 (775)
T KOG0319|consen 582 EMTLDAHND 590 (775)
T ss_pred hhhhhhccc
Confidence 999999854
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-26 Score=192.35 Aligned_cols=246 Identities=16% Similarity=0.250 Sum_probs=190.9
Q ss_pred CCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcccc--
Q psy15157 77 SIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAK-- 154 (344)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~-- 154 (344)
-+..+|..+.++++.....+......... ...+.+|..+++-..|||.|.|+|+|...|+|||||.......
T Consensus 23 ~ig~dpkgd~ilY~nGksv~ir~i~~~~~------~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLK 96 (603)
T KOG0318|consen 23 IIGGDPKGDNILYTNGKSVIIRNIDNPAS------VDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILK 96 (603)
T ss_pred EeccCCCCCeEEEeCCCEEEEEECCCccc------eeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeee
Confidence 45778888888887766556555443222 4467899999999999999999999999999999998531100
Q ss_pred ccCC--------------CCC-------------------------------------------------------CcCC
Q psy15157 155 SSME--------------SSE-------------------------------------------------------PQND 165 (344)
Q Consensus 155 ~~~~--------------~~~-------------------------------------------------------~~~~ 165 (344)
..+. ... ....
T Consensus 97 nef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffe 176 (603)
T KOG0318|consen 97 NEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFE 176 (603)
T ss_pred eeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEee
Confidence 0000 000 0011
Q ss_pred CCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccccee-eeccccceEEEEEecCCCEEEEEeCC
Q psy15157 166 QQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHK-TIQESTFVRCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 166 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~ 244 (344)
....+...+++.|..-|.|+.|+|||.+|+|++.||+|.+||=.+++....+. ...|.+.|.+++|+||+..+++++.|
T Consensus 177 GPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 177 GPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred CCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCC
Confidence 22334455677899999999999999999999999999999999887665554 44688999999999999999999999
Q ss_pred CEEEEEcC------------------------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 245 FVLRLYSS------------------------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 245 ~~i~~~~~------------------------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
.++++|+- ....|++-+.+|+|.+++...+..+..+. +|.. .|+++..+|++++
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~-GHnK-~ITaLtv~~d~~~ 334 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVIS-GHNK-SITALTVSPDGKT 334 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheec-cccc-ceeEEEEcCCCCE
Confidence 99999921 24567789999999999999999777776 5553 6999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEe-ecCCCc
Q psy15157 301 LLSSGKDSLVKLWELSSARCLIAY-TGAGSM 330 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~ 330 (344)
|++|+.||.|.-|+..+|..-+.+ ++|...
T Consensus 335 i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nq 365 (603)
T KOG0318|consen 335 IYSGSYDGHINSWDSGSGTSDRLAGKGHTNQ 365 (603)
T ss_pred EEeeccCceEEEEecCCccccccccccccce
Confidence 999999999999999998765443 344433
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=193.82 Aligned_cols=181 Identities=22% Similarity=0.449 Sum_probs=155.4
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.||++.|.|+.|. .+.+++||.|.+|+|||+++ ++++.++.+|...|..+.|+.
T Consensus 229 c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~t------------------ge~l~tlihHceaVLhlrf~n- 287 (499)
T KOG0281|consen 229 CLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNT------------------GEPLNTLIHHCEAVLHLRFSN- 287 (499)
T ss_pred HHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccC------------------CchhhHHhhhcceeEEEEEeC-
Confidence 345678999999999996 66999999999999999965 567788899999999999974
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccce-eeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAH-KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
.+++|++.|.+|.+||+......... ...+|...|+.+.|+ .+++++++.|.++++|
T Consensus 288 -g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIA 364 (499)
T KOG0281|consen 288 -GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA 364 (499)
T ss_pred -CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccce
Confidence 48999999999999999886533222 235688899999995 5699999999999999
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
...|+++++|+.|.+|++||+..|.++..+. +|+. -|.++.|+ .+.+++|+.||+|++||+.++.
T Consensus 365 ClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLe-GHEe-LvRciRFd--~krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 365 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE-LVRCIRFD--NKRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred ehhccCeEEEecCCCceEEEEeccccHHHHHHh-chHH-hhhheeec--CceeeeccccceEEEEeccccc
Confidence 3468899999999999999999999999887 4553 59999995 6789999999999999998764
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=182.56 Aligned_cols=234 Identities=20% Similarity=0.292 Sum_probs=183.4
Q ss_pred CCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccC
Q psy15157 78 IGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSM 157 (344)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~ 157 (344)
..+.|.+..++++|.|.+..-+.....-. ....+.+|+++|..+.|.+|++.+++++.|.+|+.||+++
T Consensus 53 ~~F~P~gs~~aSgG~Dr~I~LWnv~gdce----N~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t------- 121 (338)
T KOG0265|consen 53 IKFHPDGSCFASGGSDRAIVLWNVYGDCE----NFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAET------- 121 (338)
T ss_pred EEECCCCCeEeecCCcceEEEEecccccc----ceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccc-------
Confidence 46777777888888775433221111111 1224579999999999999999999999999999999965
Q ss_pred CCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC
Q psy15157 158 ESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236 (344)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 236 (344)
++..+.+++|..-|+++.-+..|. ++.|++.||++++||+++....+.+ .....++++.|...+.
T Consensus 122 -----------G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~---~~kyqltAv~f~d~s~ 187 (338)
T KOG0265|consen 122 -----------GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF---ENKYQLTAVGFKDTSD 187 (338)
T ss_pred -----------ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc---ccceeEEEEEeccccc
Confidence 567788899999999998555555 7788999999999999987554433 3456789999999999
Q ss_pred EEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCC----CeEEeeecccCCC--c
Q psy15157 237 YMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVS----SKCVATFSKAHDG--A 287 (344)
Q Consensus 237 ~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~--~ 287 (344)
.+.+|+-|+.|++| +++|.++.+-+.|.++++||++. .+++..+.++.++ .
T Consensus 188 qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfek 267 (338)
T KOG0265|consen 188 QVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEK 267 (338)
T ss_pred ceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhh
Confidence 99999999999999 45667777778888999999874 3456666543322 2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeee
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 336 (344)
....++|+|+++++-+|+.|..+++||..+...+..+.||.+......|
T Consensus 268 nlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~F 316 (338)
T KOG0265|consen 268 NLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDF 316 (338)
T ss_pred hcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeee
Confidence 3566789999999999999999999999999999999999776655544
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=176.20 Aligned_cols=195 Identities=23% Similarity=0.380 Sum_probs=168.7
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+.||..+++.+.++.+|.+|.+++.|.+..||-.. +++.+.++.+|.+.|+|++...+.+.
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~------------------nGerlGty~GHtGavW~~Did~~s~~ 66 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSL------------------NGERLGTYDGHTGAVWCCDIDWDSKH 66 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEec------------------CCceeeeecCCCceEEEEEecCCcce
Confidence 468999999999999999999999999999999863 36778899999999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-----CEE---------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-----FVL--------------------- 247 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i--------------------- 247 (344)
+++|+.|.++++||+.+++.+...+ .+.+|..+.|+++|+++++++++ +.|
T Consensus 67 liTGSAD~t~kLWDv~tGk~la~~k---~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI 143 (327)
T KOG0643|consen 67 LITGSADQTAKLWDVETGKQLATWK---TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKI 143 (327)
T ss_pred eeeccccceeEEEEcCCCcEEEEee---cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEe
Confidence 9999999999999999997655444 46789999999999998876432 222
Q ss_pred ---------EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 248 ---------RLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 248 ---------~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
.+|+|-+.++++|..||.|.+||+++++....-...|. ..|+.+.+++|..++++++.|.+-++||+++-
T Consensus 144 ~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~-~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl 222 (327)
T KOG0643|consen 144 PTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHS-SKINDLQFSRDRTYFITGSKDTTAKLVDVRTL 222 (327)
T ss_pred cCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhc-cccccccccCCcceEEecccCccceeeeccce
Confidence 23789999999999999999999999866554443554 47999999999999999999999999999999
Q ss_pred eeEEEeecCCCc
Q psy15157 319 RCLIAYTGAGSM 330 (344)
Q Consensus 319 ~~~~~~~~~~~~ 330 (344)
+++++|.-...+
T Consensus 223 ~v~Kty~te~Pv 234 (327)
T KOG0643|consen 223 EVLKTYTTERPV 234 (327)
T ss_pred eeEEEeeecccc
Confidence 999999865544
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=199.05 Aligned_cols=181 Identities=25% Similarity=0.456 Sum_probs=158.4
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
.+.++.||..+|.+++|+.+|..|+|+|.|+.|++||++++.+. ..+. -...++|+.|+|+
T Consensus 250 ~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~------------------~~f~-~~~~~~cvkf~pd 310 (503)
T KOG0282|consen 250 CLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVL------------------SRFH-LDKVPTCVKFHPD 310 (503)
T ss_pred eehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEE------------------EEEe-cCCCceeeecCCC
Confidence 34567899999999999999999999999999999999875433 2321 2346789999999
Q ss_pred C-CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 191 A-PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 191 ~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
+ +.|++|+.|+.|+.||+++++....+ ..|-..|..+.|-++|+++++.++++.+++|
T Consensus 311 ~~n~fl~G~sd~ki~~wDiRs~kvvqeY--d~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsm 388 (503)
T KOG0282|consen 311 NQNIFLVGGSDKKIRQWDIRSGKVVQEY--DRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTM 388 (503)
T ss_pred CCcEEEEecCCCcEEEEeccchHHHHHH--HhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccC
Confidence 8 79999999999999999999866544 5678889999999999999999999999999
Q ss_pred ----------------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 251 ----------------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 251 ----------------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
+|||++|++|+.||.+.+||.++.+.+.
T Consensus 389 P~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~ 468 (503)
T KOG0282|consen 389 PCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVS 468 (503)
T ss_pred cceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhh
Confidence 8999999999999999999999999998
Q ss_pred eecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEE
Q psy15157 279 TFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 279 ~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd 314 (344)
.+. .|. .++..+.|+| ....+++|+.||.|++||
T Consensus 469 ~lk-ah~-~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 469 KLK-AHD-QPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ccc-cCC-cceEEEEecCCCcceeEecccCceeEecC
Confidence 887 454 4799999999 456799999999999996
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-25 Score=197.09 Aligned_cols=205 Identities=18% Similarity=0.361 Sum_probs=171.6
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCC-CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVD-ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
+.+.-...+|..++|+..|+++|.|+.. |.+-||+..+ ...+...++|...+++++++|||
T Consensus 301 h~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs------------------EsYVlKQQgH~~~i~~l~YSpDg 362 (893)
T KOG0291|consen 301 HSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS------------------ESYVLKQQGHSDRITSLAYSPDG 362 (893)
T ss_pred EEeecccceeeEEEecccCCEEEEcCCccceEEEEEeec------------------cceeeeccccccceeeEEECCCC
Confidence 3344445789999999999999998765 8999999853 45567788999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
+++++|+.||.|+|||...+-+. ..+..|...|+.+.|+..|+.+++.+-||+++.|
T Consensus 363 q~iaTG~eDgKVKvWn~~SgfC~--vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~Qfsc 440 (893)
T KOG0291|consen 363 QLIATGAEDGKVKVWNTQSGFCF--VTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSC 440 (893)
T ss_pred cEEEeccCCCcEEEEeccCceEE--EEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeE
Confidence 99999999999999999888554 3445789999999999999999999999999999
Q ss_pred ---cCCCCEEEEEeCCCc-EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC-eeEEEee
Q psy15157 251 ---SSDGRIYCSGSKDGD-IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-RCLIAYT 325 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~ 325 (344)
+|.|.++++|+.|.. |.+|++.+|+.+-.+. +|+ ++|.+++|+|++..|+++|.|.+||+||+-.. ..+.++.
T Consensus 441 vavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLs-GHE-gPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~ 518 (893)
T KOG0291|consen 441 VAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILS-GHE-GPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLE 518 (893)
T ss_pred EEEcCCCCEEEeeccceEEEEEEEeecCeeeehhc-CCC-CcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEe
Confidence 788999999999874 9999999999998887 666 58999999999999999999999999999654 3344444
Q ss_pred cCCCcCceeeeeeeccC
Q psy15157 326 GAGSMGQQFELTLTVDA 342 (344)
Q Consensus 326 ~~~~~~~~~~~~~~~~~ 342 (344)
-.. ....++|.||+
T Consensus 519 i~s---dvl~vsfrPdG 532 (893)
T KOG0291|consen 519 IRS---DVLAVSFRPDG 532 (893)
T ss_pred ecc---ceeEEEEcCCC
Confidence 322 23555555554
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-26 Score=175.12 Aligned_cols=227 Identities=19% Similarity=0.248 Sum_probs=185.9
Q ss_pred CCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCC
Q psy15157 79 GLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSME 158 (344)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~ 158 (344)
-++..++..+..|.+....-+ .| .......++.+|...|..++.+.|...|++|+.|..|.+||+++
T Consensus 24 ryN~dGnY~ltcGsdrtvrLW-Np----~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~T-------- 90 (307)
T KOG0316|consen 24 RYNVDGNYCLTCGSDRTVRLW-NP----LRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNT-------- 90 (307)
T ss_pred EEccCCCEEEEcCCCceEEee-cc----cccceeeeecCCCceeeeccccccccccccCCCCceEEEEEccc--------
Confidence 344445556666655433222 11 12233456789999999999999999999999999999999965
Q ss_pred CCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEE
Q psy15157 159 SSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM 238 (344)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 238 (344)
++..+.+.+|.+.|+.++|+.+...+++|+.|.++++||.+................|.++.. .+..|
T Consensus 91 ----------Gkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v--~~heI 158 (307)
T KOG0316|consen 91 ----------GKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV--AEHEI 158 (307)
T ss_pred ----------CeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe--cccEE
Confidence 678899999999999999999999999999999999999998765444444445566877776 56789
Q ss_pred EEEeCCCEEEEE---------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC
Q psy15157 239 VVGTDHFVLRLY---------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN 297 (344)
Q Consensus 239 ~~~~~~~~i~~~---------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 297 (344)
+.|+-||+++.| +++++..+.++.|+++++.|-.+|+.+..+.++.+...-..++++..
T Consensus 159 vaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qs 238 (307)
T KOG0316|consen 159 VAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQS 238 (307)
T ss_pred EeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeeccc
Confidence 999999999998 78999999999999999999999999999886555444566778888
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 298 GKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 298 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
...+++|++||.|++||+..+..+..+..++.+
T Consensus 239 dthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v 271 (307)
T KOG0316|consen 239 DTHVFSGSEDGKVYFWDLVDETQISKLSVVSTV 271 (307)
T ss_pred ceeEEeccCCceEEEEEeccceeeeeeccCCce
Confidence 889999999999999999999999999877655
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=199.67 Aligned_cols=207 Identities=18% Similarity=0.313 Sum_probs=173.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC------------------------CcCCCCCCc
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE------------------------PQNDQQGHP 170 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~------------------------~~~~~~~~~ 170 (344)
+..|+..|.++.|+|...+++++-.+|.|.||+.++..+...+...+ ...+..+..
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~e 88 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGE 88 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccce
Confidence 34588899999999999999999999999999988765544333211 122345677
Q ss_pred eEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEE
Q psy15157 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRL 249 (344)
Q Consensus 171 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~ 249 (344)
.+..+..|.+-|.+++.||...+++|+|.|-+|++||.... ......+.+|...|.+++|+| |.+.+++++-|+++++
T Consensus 89 kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKV 167 (794)
T KOG0276|consen 89 KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKV 167 (794)
T ss_pred eeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCc-eeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEE
Confidence 78899999999999999999999999999999999999864 334455678999999999999 6789999999999999
Q ss_pred E-------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 250 Y-------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 250 ~-------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
| ..+..++++|+.|.+|+|||..+..|++++.++.+ .|+.+.|+|.-.++++|
T Consensus 168 Wslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~--Nvs~v~fhp~lpiiisg 245 (794)
T KOG0276|consen 168 WSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTN--NVSFVFFHPELPIIISG 245 (794)
T ss_pred EEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccc--cceEEEecCCCcEEEEe
Confidence 9 24556999999999999999999999999985443 59999999999999999
Q ss_pred eCCCcEEEEEcCCCeeEEEe
Q psy15157 305 GKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~ 324 (344)
|+||+++||+-.+-+...++
T Consensus 246 sEDGTvriWhs~Ty~lE~tL 265 (794)
T KOG0276|consen 246 SEDGTVRIWNSKTYKLEKTL 265 (794)
T ss_pred cCCccEEEecCcceehhhhh
Confidence 99999999998776544333
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-25 Score=187.01 Aligned_cols=195 Identities=34% Similarity=0.599 Sum_probs=167.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+.+|.++|++++|+|+++++++++.||.|++|++.+ ......+..|...+..+.|+|+++.
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~------------------~~~~~~~~~~~~~i~~~~~~~~~~~ 65 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLET------------------GELLRTLKGHTGPVRDVAASADGTY 65 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeC------------------CCcEEEEecCCcceeEEEECCCCCE
Confidence 4578999999999999999999999999999999863 2345677789999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------- 250 (344)
+++++.||.|++||+.+++....+ ..+...+.++.|++++.++++++.++.+.+|
T Consensus 66 l~~~~~~~~i~i~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 143 (289)
T cd00200 66 LASGSSDKTIRLWDLETGECVRTL--TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAF 143 (289)
T ss_pred EEEEcCCCeEEEEEcCcccceEEE--eccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEE
Confidence 999999999999999886443333 3566689999999998888888889999988
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
++++.++++++.|+.|++||+++++.+..+. .+. ..+.++.|+|+++.+++++.|+.|++||+++++.+..+..+...
T Consensus 144 ~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~-~~~-~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 221 (289)
T cd00200 144 SPDGTFVASSSQDGTIKLWDLRTGKCVATLT-GHT-GEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG 221 (289)
T ss_pred cCcCCEEEEEcCCCcEEEEEccccccceeEe-cCc-cccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCc
Confidence 4567888888889999999999888887776 333 46999999999999999999999999999999999888776553
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=198.38 Aligned_cols=197 Identities=26% Similarity=0.439 Sum_probs=176.2
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC--EE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP--IL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l 194 (344)
.|.+||..++|+|.+.++++|+.|+.++|||+. ...+...+++|.+.|.++.|+|+-+ +|
T Consensus 103 ~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~------------------~~~~th~fkG~gGvVssl~F~~~~~~~lL 164 (775)
T KOG0319|consen 103 IHEAPVITMAFDPTGTLLATGGADGRVKVWDIK------------------NGYCTHSFKGHGGVVSSLLFHPHWNRWLL 164 (775)
T ss_pred ccCCCeEEEEEcCCCceEEeccccceEEEEEee------------------CCEEEEEecCCCceEEEEEeCCccchhhe
Confidence 399999999999999999999999999999995 3567889999999999999999765 68
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------ 250 (344)
++|..|+.+++||+++... .......|.+.|++++|.+++..+++++.|..+.+|
T Consensus 165 ~sg~~D~~v~vwnl~~~~t-cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~ 243 (775)
T KOG0319|consen 165 ASGATDGTVRVWNLNDKRT-CLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLR 243 (775)
T ss_pred eecCCCceEEEEEcccCch-HHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEec
Confidence 9999999999999997654 233445688899999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy15157 251 -------------------------------------------------------------------------------- 250 (344)
Q Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T Consensus 244 ~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~n 323 (775)
T KOG0319|consen 244 EELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYN 323 (775)
T ss_pred hhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy15157 251 -------------------------------------------------------------------------------- 250 (344)
Q Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T Consensus 324 dEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~ 403 (775)
T KOG0319|consen 324 DEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLC 403 (775)
T ss_pred hhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhh
Confidence
Q ss_pred --------------------------------------------------------------------cCCCCEEEEEeC
Q psy15157 251 --------------------------------------------------------------------SSDGRIYCSGSK 262 (344)
Q Consensus 251 --------------------------------------------------------------------~~~~~~l~~~~~ 262 (344)
+|+..+++|||.
T Consensus 404 ~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~Sq 483 (775)
T KOG0319|consen 404 VAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQ 483 (775)
T ss_pred hhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEeccc
Confidence 688999999999
Q ss_pred CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCcee
Q psy15157 263 DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQF 334 (344)
Q Consensus 263 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 334 (344)
|.+.+||++........+.+ |.. .|.++.|+|..+.|+|+|.|++|+||.+.+..|+++|.||.+..-..
T Consensus 484 DktaKiW~le~~~l~~vLsG-H~R-Gvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra 553 (775)
T KOG0319|consen 484 DKTAKIWDLEQLRLLGVLSG-HTR-GVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRA 553 (775)
T ss_pred ccceeeecccCceEEEEeeC-Ccc-ceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEee
Confidence 99999999999999999984 443 59999999999999999999999999999999999999998775433
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=179.15 Aligned_cols=184 Identities=17% Similarity=0.346 Sum_probs=159.9
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
..|+.-|.+++|+.|.++|+||+.+..+||||++. ...+...+.+|.+.|..+-|+...+.++
T Consensus 97 f~hkhivk~~af~~ds~~lltgg~ekllrvfdln~-----------------p~App~E~~ghtg~Ir~v~wc~eD~~iL 159 (334)
T KOG0278|consen 97 FEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNR-----------------PKAPPKEISGHTGGIRTVLWCHEDKCIL 159 (334)
T ss_pred hhhhheeeeEEecccchhhhccchHHHhhhhhccC-----------------CCCCchhhcCCCCcceeEEEeccCceEE
Confidence 37899999999999999999999999999999973 2345667889999999999999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCC
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSD 253 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~ 253 (344)
|++.|++||+||.+++.....+. -+..|+++.++++|+++.++. .+.|.+| +|+
T Consensus 160 SSadd~tVRLWD~rTgt~v~sL~---~~s~VtSlEvs~dG~ilTia~-gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~ 235 (334)
T KOG0278|consen 160 SSADDKTVRLWDHRTGTEVQSLE---FNSPVTSLEVSQDGRILTIAY-GSSVKFWDAKSFGLLKSYKMPCNVESASLHPK 235 (334)
T ss_pred eeccCCceEEEEeccCcEEEEEe---cCCCCcceeeccCCCEEEEec-CceeEEeccccccceeeccCccccccccccCC
Confidence 99999999999999997655444 456799999999999887764 4556666 678
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
...+++|+.|..++.||..+++.+..+..+|. ++|.|+.|+|+|...++||+||+|++|.+..++.-
T Consensus 236 k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~-gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 236 KEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHF-GPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred CceEEecCcceEEEEEeccCCceeeecccCCC-CceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 89999999999999999999999888755666 47999999999999999999999999999877643
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-26 Score=185.67 Aligned_cols=235 Identities=22% Similarity=0.356 Sum_probs=190.4
Q ss_pred chHHHHHHHhhhccCcccccccCCCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCC
Q psy15157 53 SDRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQ 132 (344)
Q Consensus 53 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 132 (344)
+-+|.+++.-.+.|.. +++.+|..+++..+..|....... ........++.||...|+.+++|+...
T Consensus 140 pwKl~rVi~gHlgWVr--------~vavdP~n~wf~tgs~DrtikIwD-----latg~LkltltGhi~~vr~vavS~rHp 206 (460)
T KOG0285|consen 140 PWKLYRVISGHLGWVR--------SVAVDPGNEWFATGSADRTIKIWD-----LATGQLKLTLTGHIETVRGVAVSKRHP 206 (460)
T ss_pred cceehhhhhhccceEE--------EEeeCCCceeEEecCCCceeEEEE-----cccCeEEEeecchhheeeeeeecccCc
Confidence 4455555554444433 467788888877776543222111 112334567899999999999999999
Q ss_pred EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q psy15157 133 LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS 212 (344)
Q Consensus 133 ~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 212 (344)
|+++++.|+.|+.||++. .+.++.+.+|-+.|.|++.+|.-..|++|+.|.++++||+++..
T Consensus 207 YlFs~gedk~VKCwDLe~------------------nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~ 268 (460)
T KOG0285|consen 207 YLFSAGEDKQVKCWDLEY------------------NKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRA 268 (460)
T ss_pred eEEEecCCCeeEEEechh------------------hhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccc
Confidence 999999999999999953 56788899999999999999999999999999999999999974
Q ss_pred cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEE
Q psy15157 213 VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 213 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iw 269 (344)
. .+...+|..+|..+.+.|-...+++|+.|++|++| +|....|++++.| .|+-|
T Consensus 269 ~--V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w 345 (460)
T KOG0285|consen 269 S--VHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQW 345 (460)
T ss_pred e--EEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceec
Confidence 3 45556799999999999999999999999999999 5677778888777 59999
Q ss_pred eCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 270 DGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
++..+..++.+. .|. +-|+++..+.|| ++++|++.|.|.+||.++|...+.+
T Consensus 346 ~~p~g~f~~nls-gh~-~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~ 397 (460)
T KOG0285|consen 346 KLPEGEFLQNLS-GHN-AIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRG 397 (460)
T ss_pred cCCccchhhccc-ccc-ceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccc
Confidence 999999988876 444 469999988765 7899999999999999999766555
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=178.63 Aligned_cols=187 Identities=25% Similarity=0.373 Sum_probs=159.8
Q ss_pred CccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 108 AQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 108 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
...+...+..|.++|++++.+ +.++|+||.|-+|+|||+.+ ...+..+..|.+.|+++.|
T Consensus 32 ~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k------------------~~qlg~ll~HagsitaL~F 91 (362)
T KOG0294|consen 32 TLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRK------------------RKQLGILLSHAGSITALKF 91 (362)
T ss_pred eeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccc------------------hhhhcceeccccceEEEEe
Confidence 333455678999999999996 99999999999999999964 4456677889999999999
Q ss_pred cCCCC--EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------
Q psy15157 188 HPSAP--ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------- 250 (344)
Q Consensus 188 ~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------- 250 (344)
.+... .|++|+.||.|.+|+.........+ ..|...|+.++.+|.|++.++.+.|+.+++|
T Consensus 92 ~~~~S~shLlS~sdDG~i~iw~~~~W~~~~sl--K~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~ 169 (362)
T KOG0294|consen 92 YPPLSKSHLLSGSDDGHIIIWRVGSWELLKSL--KAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKN 169 (362)
T ss_pred cCCcchhheeeecCCCcEEEEEcCCeEEeeee--cccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCC
Confidence 99765 9999999999999998877554444 4577779999999999999999999999999
Q ss_pred ----------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC
Q psy15157 251 ----------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284 (344)
Q Consensus 251 ----------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 284 (344)
-.++..+++|..|+.|++||..+..+...+. +|
T Consensus 170 ~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~-AH 248 (362)
T KOG0294|consen 170 KATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFL-AH 248 (362)
T ss_pred cceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCccceeee-cc
Confidence 2367788999999999999999988888776 56
Q ss_pred CCccEEEEEE--ccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 285 DGAEISSLTF--TRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 285 ~~~~v~~i~~--~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
. ++|.++.+ +|++.||+|+|.||.|++||++..
T Consensus 249 ~-~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 249 E-NRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred h-hheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 5 47988874 567889999999999999999876
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=175.96 Aligned_cols=196 Identities=22% Similarity=0.407 Sum_probs=165.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-C
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-P 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 192 (344)
.+.+|...|.+++|+.+|..+++|+.|+++.+|+++.. ....-...++|.+.|-.++|+|.. .
T Consensus 15 ~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~----------------r~~~~~~~~gh~~svdql~w~~~~~d 78 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD----------------RFRKELVYRGHTDSVDQLCWDPKHPD 78 (313)
T ss_pred HhhhhhhcceEEEEcccCceeeecccCCceEEEEecch----------------hhhhhhcccCCCcchhhheeCCCCCc
Confidence 45789999999999999999999999999999999743 112223567899999999999855 5
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------- 250 (344)
.|++++.|.+|++||++.+++........ .. .-+.|+|+|.++++++.|..|.+.
T Consensus 79 ~~atas~dk~ir~wd~r~~k~~~~i~~~~--en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w 155 (313)
T KOG1407|consen 79 LFATASGDKTIRIWDIRSGKCTARIETKG--EN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISW 155 (313)
T ss_pred ceEEecCCceEEEEEeccCcEEEEeeccC--cc-eEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeee
Confidence 99999999999999999987665444322 22 337899999999999988877764
Q ss_pred ------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCcc
Q psy15157 251 ------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE 288 (344)
Q Consensus 251 ------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 288 (344)
+|+|++||+|+.|..+.+||+...-|++.+.... -+
T Consensus 156 ~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRld--wp 233 (313)
T KOG1407|consen 156 NNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLD--WP 233 (313)
T ss_pred cCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecccc--Cc
Confidence 8999999999999999999999988888887432 57
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 289 v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
|..+.|+.||++|+++|+|..|-|=++.+|..+..++..+..
T Consensus 234 VRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t 275 (313)
T KOG1407|consen 234 VRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPT 275 (313)
T ss_pred eEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCc
Confidence 999999999999999999999999999999998888765544
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=201.93 Aligned_cols=186 Identities=24% Similarity=0.392 Sum_probs=154.4
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP- 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~- 189 (344)
+...+.||.+.|.++.||. .++|+++|.|.+||+|++.. ..++. ...|..-|+|++|+|
T Consensus 361 P~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~------------------~~CL~-~F~HndfVTcVaFnPv 420 (712)
T KOG0283|consen 361 PFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGR------------------KECLK-VFSHNDFVTCVAFNPV 420 (712)
T ss_pred chhhhhccchhheeccccc-CCeeEeccccccEEeecCCC------------------cceee-EEecCCeeEEEEeccc
Confidence 3455789999999999997 45899999999999999863 23333 446999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------ 251 (344)
|.++|++|+-||.|+||++...+... -..-...|++++|.|+|++.++|+-+|.+++|+
T Consensus 421 DDryFiSGSLD~KvRiWsI~d~~Vv~---W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~K 497 (712)
T KOG0283|consen 421 DDRYFISGSLDGKVRLWSISDKKVVD---WNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKK 497 (712)
T ss_pred CCCcEeecccccceEEeecCcCeeEe---ehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCc
Confidence 67799999999999999998765422 122346799999999999999999999999981
Q ss_pred --------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 252 --------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 252 --------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
.+...+++.+.|..|||||.+....+..+++.+....-....|+.||++|+++++|..|++|++..
T Consensus 498 k~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 498 KKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred cccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 122246677899999999999999999998777766667789999999999999999999999854
Q ss_pred Ce
Q psy15157 318 AR 319 (344)
Q Consensus 318 ~~ 319 (344)
..
T Consensus 578 ~~ 579 (712)
T KOG0283|consen 578 FN 579 (712)
T ss_pred Cc
Confidence 43
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=209.68 Aligned_cols=205 Identities=21% Similarity=0.338 Sum_probs=161.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-API 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~ 193 (344)
+..|.+.|.+++|+++|+++|+|+.|+.|+||++....... .....+...+. +...|.+++|++. +..
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~----------~~~~~~~~~~~-~~~~v~~l~~~~~~~~~ 547 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDG----------RDIHYPVVELA-SRSKLSGICWNSYIKSQ 547 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccc----------cccccceEEec-ccCceeeEEeccCCCCE
Confidence 34589999999999999999999999999999985321100 00011222333 3467999999874 679
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~---------------------- 250 (344)
|++++.||+|++||+.+++.... ...|...|++++|+| ++.+|++|+.|+.+++|
T Consensus 548 las~~~Dg~v~lWd~~~~~~~~~--~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~ 625 (793)
T PLN00181 548 VASSNFEGVVQVWDVARSQLVTE--MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQF 625 (793)
T ss_pred EEEEeCCCeEEEEECCCCeEEEE--ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEE
Confidence 99999999999999988754433 346888999999997 78999999999999999
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCe-EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC------CeeEE
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSK-CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS------ARCLI 322 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~------~~~~~ 322 (344)
+++|.++++|+.||.|++||+++.+ .+..+. .|. ..|.++.|. ++.+|++++.|+.|++||++. ..++.
T Consensus 626 ~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~-~h~-~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~ 702 (793)
T PLN00181 626 PSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI-GHS-KTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLH 702 (793)
T ss_pred eCCCCCEEEEEeCCCeEEEEECCCCCccceEec-CCC-CCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceE
Confidence 2458899999999999999998765 344454 454 469999997 788999999999999999985 36788
Q ss_pred EeecCCCcCceee
Q psy15157 323 AYTGAGSMGQQFE 335 (344)
Q Consensus 323 ~~~~~~~~~~~~~ 335 (344)
.+.+|......+.
T Consensus 703 ~~~gh~~~i~~v~ 715 (793)
T PLN00181 703 SFMGHTNVKNFVG 715 (793)
T ss_pred EEcCCCCCeeEEE
Confidence 8988876544433
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-25 Score=202.80 Aligned_cols=205 Identities=20% Similarity=0.342 Sum_probs=169.3
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+..|.+.|+|+.|++||++||+||+|+.|.||..........+.......+...++....+.+|.+.|.+++|+|+
T Consensus 61 ~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~ 140 (942)
T KOG0973|consen 61 HLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD 140 (942)
T ss_pred hheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC
Confidence 34556799999999999999999999999999999998741111111111223344567889999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+.+|++++.|++|.|||..+...... ...|...|..+.|+|-|+||++-++|+++++|
T Consensus 141 ~~~lvS~s~DnsViiwn~~tF~~~~v--l~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~ 218 (942)
T KOG0973|consen 141 DSLLVSVSLDNSVIIWNAKTFELLKV--LRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPL 218 (942)
T ss_pred ccEEEEecccceEEEEccccceeeee--eecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCC
Confidence 99999999999999999999855443 45688899999999999999999999999999
Q ss_pred --------------------------------------------------------------------cCCCC----EEE
Q psy15157 251 --------------------------------------------------------------------SSDGR----IYC 258 (344)
Q Consensus 251 --------------------------------------------------------------------~~~~~----~l~ 258 (344)
+.... .+|
T Consensus 219 ~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~A 298 (942)
T KOG0973|consen 219 TTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAA 298 (942)
T ss_pred cceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEE
Confidence 11122 688
Q ss_pred EEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+|+.|++|.||.....+++..+..-.. ..|..++|+|||..|+++|.||+|.+..+...
T Consensus 299 vgSqDrSlSVW~T~~~RPl~vi~~lf~-~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 299 VGSQDRSLSVWNTALPRPLFVIHNLFN-KSIVDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred EecCCccEEEEecCCCCchhhhhhhhc-CceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 999999999999988888776653333 46999999999999999999999999998754
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=184.24 Aligned_cols=187 Identities=20% Similarity=0.341 Sum_probs=150.7
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..++.+|..+|.-+.||||.++|++++.|..+.+||+.++...... -.+|...+.+++|.|||
T Consensus 262 ~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y-----------------~~~~~~S~~sc~W~pDg 324 (519)
T KOG0293|consen 262 KKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLY-----------------PSGLGFSVSSCAWCPDG 324 (519)
T ss_pred eeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhc-----------------ccCcCCCcceeEEccCC
Confidence 5678899999999999999999999999999999999865332211 12345788999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccc-----c---c-------------------------------eeeeccccceEEEEEe
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVR-----K---A-------------------------------HKTIQESTFVRCLSFH 232 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~-----~---~-------------------------------~~~~~~~~~v~~~~~~ 232 (344)
..+++|+.|+++..||+...... + . ........+|++++.+
T Consensus 325 ~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS 404 (519)
T KOG0293|consen 325 FRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSIS 404 (519)
T ss_pred ceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEc
Confidence 99999999999999997543100 0 0 0012234578889999
Q ss_pred cCCCEEEEEeCCCEEEEE--------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC
Q psy15157 233 PCGDYMVVGTDHFVLRLY--------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286 (344)
Q Consensus 233 ~~~~~l~~~~~~~~i~~~--------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 286 (344)
.+|+++++.-.+..+.+| -.+..++++||.|+.|+||+..+++++..+. +|.
T Consensus 405 ~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~Ls-GHs- 482 (519)
T KOG0293|consen 405 KDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLS-GHS- 482 (519)
T ss_pred CCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeec-CCc-
Confidence 999999999999999999 2456789999999999999999999999998 454
Q ss_pred ccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCC
Q psy15157 287 AEISSLTFTR-NGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 287 ~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..|++++|+| +...+|++|+||+||||....
T Consensus 483 ~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 483 KTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred ceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 3699999999 455689999999999998753
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=189.74 Aligned_cols=223 Identities=23% Similarity=0.340 Sum_probs=172.9
Q ss_pred CccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEE
Q psy15157 108 AQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLE 186 (344)
Q Consensus 108 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~ 186 (344)
+......+.+|+..|.++++.|.|..|+|||.|.+|++||+..+.... +..+.+ ......|+++.
T Consensus 156 P~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~--------------~~fr~l~P~E~h~i~sl~ 221 (641)
T KOG0772|consen 156 PGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASM--------------RSFRQLQPCETHQINSLQ 221 (641)
T ss_pred CccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccc--------------hhhhccCcccccccceee
Confidence 334455678999999999999999999999999999999997653221 111122 22345799999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCccccc----------eeeeccccceEEEEEecC-CCEEEEEeCCCEEEEE-----
Q psy15157 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKA----------HKTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY----- 250 (344)
Q Consensus 187 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~----- 250 (344)
|++.+..|++.+..-..+|+|-........ ....+|...++|.+|+|. ...+++++.|+++++|
T Consensus 222 ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~ 301 (641)
T KOG0772|consen 222 YSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNT 301 (641)
T ss_pred ecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCc
Confidence 999999888888888899999654332221 234467888999999996 4578899999999999
Q ss_pred ------------------------cCCCCEEEEEeCCCcEEEEeCCCC--eEEeeecccCCC-ccEEEEEEccCCCEEEE
Q psy15157 251 ------------------------SSDGRIYCSGSKDGDIKIWDGVSS--KCVATFSKAHDG-AEISSLTFTRNGKYLLS 303 (344)
Q Consensus 251 ------------------------~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~-~~v~~i~~~~~~~~l~s 303 (344)
+++|..+|+|+.||.|.+|+..+. .....+..+|.. ..|+||.|++||++|++
T Consensus 302 k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlS 381 (641)
T KOG0772|consen 302 KSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLS 381 (641)
T ss_pred hhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhh
Confidence 789999999999999999997543 333444445543 36999999999999999
Q ss_pred EeCCCcEEEEEcCC-CeeEEEeecCCCcCceeeeeeeccCCC
Q psy15157 304 SGKDSLVKLWELSS-ARCLIAYTGAGSMGQQFELTLTVDADV 344 (344)
Q Consensus 304 ~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (344)
-|.|+++++||++. .+++..+.+-...-......|+++.+|
T Consensus 382 Rg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kl 423 (641)
T KOG0772|consen 382 RGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKL 423 (641)
T ss_pred ccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceE
Confidence 99999999999987 467777777665556666677777653
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=177.26 Aligned_cols=194 Identities=23% Similarity=0.394 Sum_probs=158.2
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCC-------CCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS-------EPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.||+..|-++...++|..+++||.|..|+||+..+.......... ..........++.++.+|.++|.++.|+
T Consensus 190 ~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~ 269 (423)
T KOG0313|consen 190 RGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWS 269 (423)
T ss_pred cccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEc
Confidence 499999999999999999999999999999994332111111110 0112234567888999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC----------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS---------------- 252 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~---------------- 252 (344)
+ ...+++++.|.+|+.||+.++....... .+..+.|+.++|..++|++|+.|..+++|+|
T Consensus 270 d-~~v~yS~SwDHTIk~WDletg~~~~~~~---~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~ 345 (423)
T KOG0313|consen 270 D-ATVIYSVSWDHTIKVWDLETGGLKSTLT---TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHK 345 (423)
T ss_pred C-CCceEeecccceEEEEEeecccceeeee---cCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecch
Confidence 8 6689999999999999999987654443 4567999999999999999999999999943
Q ss_pred -----------CCCEEEEEeCCCcEEEEeCCCCe-EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 253 -----------DGRIYCSGSKDGDIKIWDGVSSK-CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 253 -----------~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+...|++|+.|+++++||+++.+ ++..+.. |. ..|.++.|+ ++.++++||.|.+|+++.-.
T Consensus 346 nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~-h~-DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 346 NWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG-HN-DKVLSVDWN-EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred hhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeecc-CC-ceEEEEecc-CCceEEeccCcceEEEeccc
Confidence 34568999999999999999987 8888864 43 479999998 67899999999999998653
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-23 Score=177.35 Aligned_cols=206 Identities=30% Similarity=0.562 Sum_probs=171.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|...+.++.|+++++++++++.||.|++|++.+ ......+..|...+.++.|++++
T Consensus 44 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~------------------~~~~~~~~~~~~~i~~~~~~~~~ 105 (289)
T cd00200 44 LRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLET------------------GECVRTLTGHTSYVSSVAFSPDG 105 (289)
T ss_pred EEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCc------------------ccceEEEeccCCcEEEEEEcCCC
Confidence 345678999999999999999999999999999999963 23456677888899999999998
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.++++++.||.|++||+.+++....+ ..+...+.++.|+|++.++++++.++.+.+|
T Consensus 106 ~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~ 183 (289)
T cd00200 106 RILSSSSRDKTIKVWDVETGKCLTTL--RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSV 183 (289)
T ss_pred CEEEEecCCCeEEEEECCCcEEEEEe--ccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceE
Confidence 89998888999999999876544333 3567789999999999999988889999988
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+++++.+++++.|+.|++||.++++.+..+. .+. ..+.++.|+|++.++++++.||.|++||+.+++.+..+.+|.
T Consensus 184 ~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~-~~~-~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~ 261 (289)
T cd00200 184 AFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR-GHE-NGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHT 261 (289)
T ss_pred EECCCcCEEEEecCCCcEEEEECCCCceecchh-hcC-CceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccC
Confidence 5778889999999999999999988887775 333 369999999999999988889999999999999999998765
Q ss_pred CcCceeeeeeecc
Q psy15157 329 SMGQQFELTLTVD 341 (344)
Q Consensus 329 ~~~~~~~~~~~~~ 341 (344)
.. ...+.++++
T Consensus 262 ~~--i~~~~~~~~ 272 (289)
T cd00200 262 NS--VTSLAWSPD 272 (289)
T ss_pred Cc--EEEEEECCC
Confidence 44 334444443
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-24 Score=173.15 Aligned_cols=194 Identities=21% Similarity=0.327 Sum_probs=174.0
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..+|..|++.|.+++.+|+.++++||+.|..-.+|++.+ +.....+.+|+..|+++.|+.+|
T Consensus 57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~------------------ge~~~eltgHKDSVt~~~Fshdg 118 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDIST------------------GEFAGELTGHKDSVTCCSFSHDG 118 (399)
T ss_pred eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccC------------------CcceeEecCCCCceEEEEEccCc
Confidence 446789999999999999999999999999999999964 44677889999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.+|+||..+|.|+||+..++.....+ ......+.-+.|||.+..|+.|+.||.+.+|
T Consensus 119 tlLATGdmsG~v~v~~~stg~~~~~~--~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G 196 (399)
T KOG0296|consen 119 TLLATGDMSGKVLVFKVSTGGEQWKL--DQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCG 196 (399)
T ss_pred eEEEecCCCccEEEEEcccCceEEEe--ecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccc
Confidence 99999999999999999998655444 3445667889999999999999999999999
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.|+|+.++++..||+|++||..++.++..+.... +....++.++.++..+++|+.++.+++-+..+|+.+..+.+
T Consensus 197 ~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e-~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~ 273 (399)
T KOG0296|consen 197 EFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAE-GLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNG 273 (399)
T ss_pred cccCCCceEEEEecCceEEEEecCCCceeEEecccc-cCcCCccccccccceeEeccCCccEEEEccccceEEEecCC
Confidence 6899999999999999999999999999887544 35688999999999999999999999999999999988885
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-23 Score=198.69 Aligned_cols=185 Identities=18% Similarity=0.344 Sum_probs=153.6
Q ss_pred CCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEEE
Q psy15157 118 HKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~ 195 (344)
+...|.+++|++ ++.+|++++.||+|++||+.+ ...+..+.+|.+.|++++|+| ++.+|+
T Consensus 531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~------------------~~~~~~~~~H~~~V~~l~~~p~~~~~L~ 592 (793)
T PLN00181 531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVAR------------------SQLVTEMKEHEKRVWSIDYSSADPTLLA 592 (793)
T ss_pred ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCC------------------CeEEEEecCCCCCEEEEEEcCCCCCEEE
Confidence 456899999987 578999999999999999853 455678889999999999997 778999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEe-cCCCEEEEEeCCCEEEEEc-----------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH-PCGDYMVVGTDHFVLRLYS----------------------- 251 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~i~~~~----------------------- 251 (344)
||+.||+|++||++++.....+. ....+.++.|+ ++|.++++|+.|+.|++|+
T Consensus 593 Sgs~Dg~v~iWd~~~~~~~~~~~---~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f 669 (793)
T PLN00181 593 SGSDDGSVKLWSINQGVSIGTIK---TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRF 669 (793)
T ss_pred EEcCCCEEEEEECCCCcEEEEEe---cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEE
Confidence 99999999999999876543332 34578999995 5799999999999999992
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCC------eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSS------KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.++.++++++.|+.|++||++.+ ..+..+. +|. ..++.++|+|++.+|++|+.|+.|++|+......+..+.
T Consensus 670 ~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~-gh~-~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~ 747 (793)
T PLN00181 670 VDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFM-GHT-NVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYK 747 (793)
T ss_pred eCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEc-CCC-CCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEe
Confidence 25678999999999999998743 4566665 444 468999999999999999999999999988776655443
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=180.15 Aligned_cols=207 Identities=21% Similarity=0.282 Sum_probs=173.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+|.|..+.|+.+.|.++++++++++.|+.+++|+++. .....++.+|++.|+++.|.....
T Consensus 213 ~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~------------------~r~~~TLsGHtdkVt~ak~~~~~~ 274 (459)
T KOG0288|consen 213 STLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDS------------------LRLRHTLSGHTDKVTAAKFKLSHS 274 (459)
T ss_pred hhhhccCCCcceeeecCCCceEEeecCCCceeeeeccc------------------hhhhhhhcccccceeeehhhcccc
Confidence 45667788999999999999999999999999999964 456778999999999999998877
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------- 250 (344)
.+++|+.|.+|++||+....+.+.+.. ...+..+..+ ...+++|-.|+.|++|
T Consensus 275 ~vVsgs~DRtiK~WDl~k~~C~kt~l~---~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~l 349 (459)
T KOG0288|consen 275 RVVSGSADRTIKLWDLQKAYCSKTVLP---GSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDL 349 (459)
T ss_pred ceeeccccchhhhhhhhhhheeccccc---cccccceEec--ceeeeecccccceEEEeccCCceeeEeecCcceeeEee
Confidence 799999999999999998766554433 2334444443 5677888899999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecc--cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK--AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+++|..+.+++.|.++.+.|+++.+..+.+.. .......+.+.|||++.|+++||.||.|+||++.++++...+...+
T Consensus 350 s~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~ 429 (459)
T KOG0288|consen 350 SMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLST 429 (459)
T ss_pred ccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCC
Confidence 57888899999999999999999988877652 1223348899999999999999999999999999999999999988
Q ss_pred CcCceeeeeeeccC
Q psy15157 329 SMGQQFELTLTVDA 342 (344)
Q Consensus 329 ~~~~~~~~~~~~~~ 342 (344)
+....+++.|++.+
T Consensus 430 s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 430 SNAAITSLSWNPSG 443 (459)
T ss_pred CCcceEEEEEcCCC
Confidence 87677788877655
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-24 Score=179.83 Aligned_cols=202 Identities=26% Similarity=0.463 Sum_probs=167.7
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-IL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 194 (344)
.-.+..|.++.|..||++||+|+..|.|+|||..+ ...++.+.+|+.+|..+.|+|+++ .|
T Consensus 65 srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~------------------r~iLR~~~ah~apv~~~~f~~~d~t~l 126 (487)
T KOG0310|consen 65 SRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS------------------RVILRQLYAHQAPVHVTKFSPQDNTML 126 (487)
T ss_pred HhhccceeEEEeecCCeEEEccCCcCcEEEecccc------------------HHHHHHHhhccCceeEEEecccCCeEE
Confidence 44577899999999999999999999999999642 345678899999999999999665 78
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE-----------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~----------------------- 250 (344)
++|+.|+.+++||+.+... .....+|...|.|.+|+|... .+++|+.||.|++|
T Consensus 127 ~s~sDd~v~k~~d~s~a~v--~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~ 204 (487)
T KOG0310|consen 127 VSGSDDKVVKYWDLSTAYV--QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLA 204 (487)
T ss_pred EecCCCceEEEEEcCCcEE--EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEE
Confidence 8999999999999998763 456678999999999999655 77899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
-|.|..+++++. ..|++||+.+|.........|+ ..|+|+++..++..|++||-|+.|++||+.+-+.++.+...++.
T Consensus 205 lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~-KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pv 282 (487)
T KOG0310|consen 205 LPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHN-KTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPV 282 (487)
T ss_pred cCCCCEEEEcCC-CeEEEEEecCCceehhhhhccc-ceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccce
Confidence 367788888764 4799999996655444333344 36999999999999999999999999999999999988776544
Q ss_pred CceeeeeeeccC
Q psy15157 331 GQQFELTLTVDA 342 (344)
Q Consensus 331 ~~~~~~~~~~~~ 342 (344)
+++..++|.
T Consensus 283 ---Lsiavs~dd 291 (487)
T KOG0310|consen 283 ---LSIAVSPDD 291 (487)
T ss_pred ---eeEEecCCC
Confidence 666666654
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=189.08 Aligned_cols=229 Identities=26% Similarity=0.400 Sum_probs=183.4
Q ss_pred CCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCC----------------------
Q psy15157 105 PEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEP---------------------- 162 (344)
Q Consensus 105 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~---------------------- 162 (344)
|.+.......+.||+..|++++||.+...+++|+ .++++||+..++.+.....+...
T Consensus 359 p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~ 437 (888)
T KOG0306|consen 359 PEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQ 437 (888)
T ss_pred ccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceE
Confidence 4445555667789999999999999888888875 57899999998766554433210
Q ss_pred cCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-----ccccce-----eeeccccceEEEEEe
Q psy15157 163 QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS-----SVRKAH-----KTIQESTFVRCLSFH 232 (344)
Q Consensus 163 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~-----~~~~~~~~v~~~~~~ 232 (344)
..+......+.+...|.+.|++++.+||+..+++||.|.+|++||..-- ...+.+ ....-...|.|+.++
T Consensus 438 vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~S 517 (888)
T KOG0306|consen 438 VFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVS 517 (888)
T ss_pred EEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEc
Confidence 0112223345567789999999999999999999999999999996421 111111 122335679999999
Q ss_pred cCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccE
Q psy15157 233 PCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEI 289 (344)
Q Consensus 233 ~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 289 (344)
|+|++++++--|+++.+| +||++.++|||.|.+|++|-+.-|.|...+. +|.. .|
T Consensus 518 pdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~f-AHdD-Sv 595 (888)
T KOG0306|consen 518 PDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFF-AHDD-SV 595 (888)
T ss_pred CCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhh-cccC-ce
Confidence 999999999999999997 8999999999999999999999999999887 5554 59
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeee
Q psy15157 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 336 (344)
.++.|.|....++++|.|+.|+-||-..-+++..+.+|..-..+...
T Consensus 596 m~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav 642 (888)
T KOG0306|consen 596 MSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAV 642 (888)
T ss_pred eEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEE
Confidence 99999999999999999999999999999999999998765544443
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=167.70 Aligned_cols=195 Identities=16% Similarity=0.276 Sum_probs=159.8
Q ss_pred cCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEE
Q psy15157 117 SHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l 194 (344)
.-.+.+..++|+++ .+.+++++.||+++|||+. ....++..++.|..+|.++.|++. +..+
T Consensus 58 d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~-----------------~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ 120 (311)
T KOG0277|consen 58 DTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT-----------------MPSKPIHKFKEHKREVYSVDWNTVRRRIF 120 (311)
T ss_pred ecccceeEeeecCCCcceEEEEecCceEEEeccC-----------------CCCcchhHHHhhhhheEEeccccccceeE
Confidence 45678999999984 5689999999999999964 334578899999999999999994 4578
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE-----------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~----------------------- 250 (344)
+++|.||+|++|+...++...+ ..+|...|....|+| ..+.+++++.|+.+++|
T Consensus 121 ltsSWD~TiKLW~~~r~~Sv~T--f~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw 198 (311)
T KOG0277|consen 121 LTSSWDGTIKLWDPNRPNSVQT--FNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDW 198 (311)
T ss_pred EeeccCCceEeecCCCCcceEe--ecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecc
Confidence 8889999999999988765555 456889999999999 57899999999999999
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCe-EEeeecccCCCccEEEEEEccC-CCEEEEEeCCCcEEEEEcCCC-eeEEEeec
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSK-CVATFSKAHDGAEISSLTFTRN-GKYLLSSGKDSLVKLWELSSA-RCLIAYTG 326 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~ 326 (344)
..+...++||+.|+.|+.||+++.+ ++..+. +|. -.|..++|+|. ...|++++.|-++||||...+ .++.++..
T Consensus 199 ~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~-gh~-~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~ 276 (311)
T KOG0277|consen 199 SKYNHNVLATGGVDNLVRGWDIRNLRTPLFELN-GHG-LAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDH 276 (311)
T ss_pred cccCCcEEEecCCCceEEEEehhhccccceeec-CCc-eEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhc
Confidence 3466789999999999999999865 444553 554 46999999994 567899999999999999854 45666666
Q ss_pred CCCcCc
Q psy15157 327 AGSMGQ 332 (344)
Q Consensus 327 ~~~~~~ 332 (344)
|..-..
T Consensus 277 HtEFv~ 282 (311)
T KOG0277|consen 277 HTEFVC 282 (311)
T ss_pred cceEEe
Confidence 654433
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-23 Score=184.07 Aligned_cols=202 Identities=15% Similarity=0.186 Sum_probs=152.3
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s 196 (344)
|-..|+....++++..+++++.+.....|+...+........ .... ......+.+|.+.|.+++|+| ++++|++
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~--~G~~---~~~~~~l~GH~~~V~~v~fsP~d~~~LaS 93 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTD--YGKL---ASNPPILLGQEGPIIDVAFNPFDPQKLFT 93 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccc--cccC---CCCCceEeCCCCCEEEEEEcCCCCCEEEE
Confidence 445677777888888888888888888998754322111110 0000 011234679999999999999 7889999
Q ss_pred EeCCCcEEEEEcCCCccc-----cceeeeccccceEEEEEecCC-CEEEEEeCCCEEEEE--------------------
Q psy15157 197 GSKDKTVKMFDYSKSSVR-----KAHKTIQESTFVRCLSFHPCG-DYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~~-------------------- 250 (344)
|+.|++|++||+.++... ......+|...|.+++|+|++ .+|++++.|+.|++|
T Consensus 94 gS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~s 173 (493)
T PTZ00421 94 ASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITS 173 (493)
T ss_pred EeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEE
Confidence 999999999999765321 122345688899999999985 689999999999998
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe----CCCcEEEEEcCCCe-eEE
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG----KDSLVKLWELSSAR-CLI 322 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~----~dg~i~vwd~~~~~-~~~ 322 (344)
+++|.+|++++.|+.|++||+++++.+..+. .|.+..+..+.|.+++..+++++ .|+.|++||+++.. ++.
T Consensus 174 la~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~-~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~ 252 (493)
T PTZ00421 174 LEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVE-AHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYS 252 (493)
T ss_pred EEEECCCCEEEEecCCCEEEEEECCCCcEEEEEe-cCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCcee
Confidence 6789999999999999999999999888876 44444456788999888887764 47899999998754 444
Q ss_pred Eee
Q psy15157 323 AYT 325 (344)
Q Consensus 323 ~~~ 325 (344)
.+.
T Consensus 253 ~~~ 255 (493)
T PTZ00421 253 TVD 255 (493)
T ss_pred Eec
Confidence 333
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=175.74 Aligned_cols=208 Identities=24% Similarity=0.299 Sum_probs=171.1
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+|...+.+++.|+||+|||+|+.|..|.||++++ ...+..+.+|.+.|.+++|-.....++
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t------------------~ehv~~~~ghr~~V~~L~fr~gt~~ly 260 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDT------------------LEHVKVFKGHRGAVSSLAFRKGTSELY 260 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcc------------------cchhhcccccccceeeeeeecCcccee
Confidence 38999999999999999999999999999999965 445667899999999999998888999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------cCCC
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------SSDG 254 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------~~~~ 254 (344)
+++.|++|++|++.......++ .+|...|..+....-++.+.+|+.|.++++| --+.
T Consensus 261 s~s~Drsvkvw~~~~~s~vetl--yGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~ 338 (479)
T KOG0299|consen 261 SASADRSVKVWSIDQLSYVETL--YGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND 338 (479)
T ss_pred eeecCCceEEEehhHhHHHHHH--hCCccceeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecc
Confidence 9999999999999877655443 5788889999888888999999999999999 1245
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEeeecccCCC----------ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC-eeEEE
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG----------AEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-RCLIA 323 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~ 323 (344)
..+++|+.+|.|.+|++...+++.+...+|.- .+|++++..|....+++|+.+|.|++|.+..| +.+.-
T Consensus 339 ~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~ 418 (479)
T KOG0299|consen 339 EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINL 418 (479)
T ss_pred cceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccce
Confidence 67889999999999999999988877644421 27999999999999999999999999999887 22222
Q ss_pred eecCCCcCceeeeeeeccCC
Q psy15157 324 YTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..-.-.|-.-++.|+.+++
T Consensus 419 l~~ls~~GfVNsl~f~~sgk 438 (479)
T KOG0299|consen 419 LYSLSLVGFVNSLAFSNSGK 438 (479)
T ss_pred eeecccccEEEEEEEccCCC
Confidence 22223444555555665543
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=186.52 Aligned_cols=199 Identities=23% Similarity=0.412 Sum_probs=165.3
Q ss_pred CCCceE---EEEEC-CCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 118 HKSPCR---AGAFS-IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 118 h~~~v~---~~~~s-~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
|...|. .+..+ |.++||+|||.||.|++|++..... ....+....+..|...|+++....+++.
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~------------~~s~~~~asme~HsDWVNDiiL~~~~~t 87 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSN------------EPSTPYIASMEHHSDWVNDIILCGNGKT 87 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccC------------CcccchhhhhhhhHhHHhhHHhhcCCCc
Confidence 444555 44444 4678899999999999999863211 1112246788899999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEE-ecCCCEEEEEeCCCEEEEE----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF-HPCGDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~~~~i~~~---------------------- 250 (344)
|+|+|.|-+|++|+..............|...|.|+++ -++...+++|+-|+.|.+|
T Consensus 88 lIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~ 167 (735)
T KOG0308|consen 88 LISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLG 167 (735)
T ss_pred eEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCC
Confidence 99999999999999987642222223458899999999 7888999999999999999
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
.+.|..+++|+..+.|++||.++++.+-.+. +|.. .|..+..++||+.++++|.||+|++||+...
T Consensus 168 sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTd-NVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ 245 (735)
T KOG0308|consen 168 SGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTD-NVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ 245 (735)
T ss_pred CCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee-cccc-ceEEEEEcCCCCeEeecCCCceEEeeecccc
Confidence 4566789999999999999999999998888 5654 5999999999999999999999999999999
Q ss_pred eeEEEeecCCCc
Q psy15157 319 RCLIAYTGAGSM 330 (344)
Q Consensus 319 ~~~~~~~~~~~~ 330 (344)
+|+.+|..|...
T Consensus 246 rCl~T~~vH~e~ 257 (735)
T KOG0308|consen 246 RCLATYIVHKEG 257 (735)
T ss_pred ceeeeEEeccCc
Confidence 999999988655
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-23 Score=169.71 Aligned_cols=190 Identities=21% Similarity=0.357 Sum_probs=157.1
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC---CE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA---PI 193 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~ 193 (344)
.|.+.|.++... +++++||++||.+++||.. ++...++.+|.++|.+++|.-.. ..
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-------------------Gk~~~~~~Ght~~ik~v~~v~~n~~~~~ 161 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-------------------GKSIKTIVGHTGPIKSVAWVIKNSSSCL 161 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecC-------------------CceEEEEecCCcceeeeEEEecCCccce
Confidence 599999999888 8899999999999999975 67788999999999999986533 36
Q ss_pred EEEEeCCCcEEEEEcCCCccccc--eeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKA--HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
|++++.|.++++|-++.+..... ....+|...|.+++..++|..+++|+.|..+.+|
T Consensus 162 fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~ 241 (423)
T KOG0313|consen 162 FVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQ 241 (423)
T ss_pred EEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhh
Confidence 99999999999999987754322 2223788899999999999999999999999999
Q ss_pred -------------------------------------------------------------------cCCCCEEEEEeCC
Q psy15157 251 -------------------------------------------------------------------SSDGRIYCSGSKD 263 (344)
Q Consensus 251 -------------------------------------------------------------------~~~~~~l~~~~~d 263 (344)
.+..+++++|+.|
T Consensus 242 ~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssd 321 (423)
T KOG0313|consen 242 KREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSD 321 (423)
T ss_pred hhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCC
Confidence 5667788888888
Q ss_pred CcEEEEeCCCCe--E-EeeecccCCCccEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCe-eEEEeecCCC
Q psy15157 264 GDIKIWDGVSSK--C-VATFSKAHDGAEISSLTFTRNGK-YLLSSGKDSLVKLWELSSAR-CLIAYTGAGS 329 (344)
Q Consensus 264 g~i~iwd~~~~~--~-~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~ 329 (344)
..|++||.+++. . .+.+. +|. +.|.++.|+|... .|++|+.|+++++||+|+.+ +++.+.+|..
T Consensus 322 r~irl~DPR~~~gs~v~~s~~-gH~-nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~D 390 (423)
T KOG0313|consen 322 RHIRLWDPRTGDGSVVSQSLI-GHK-NWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHND 390 (423)
T ss_pred CceeecCCCCCCCceeEEeee-cch-hhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCc
Confidence 888888877652 2 23443 555 4899999999655 57889999999999999988 8999988843
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-22 Score=181.07 Aligned_cols=177 Identities=20% Similarity=0.374 Sum_probs=139.3
Q ss_pred EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcc-c
Q psy15157 137 GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILASGSKDKTVKMFDYSKSSV-R 214 (344)
Q Consensus 137 g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~-~ 214 (344)
|+.++.|++|+..+ ...+..+.+|.+.|.+++|+|+ +.+|+||+.||+|++||+.++.. .
T Consensus 50 GG~~gvI~L~~~~r------------------~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~ 111 (568)
T PTZ00420 50 GGLIGAIRLENQMR------------------KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESV 111 (568)
T ss_pred CCceeEEEeeecCC------------------CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 66788899998742 3457788999999999999997 78999999999999999986431 1
Q ss_pred -----cceeeeccccceEEEEEecCCCEE-EEEeCCCEEEEE----------------------cCCCCEEEEEeCCCcE
Q psy15157 215 -----KAHKTIQESTFVRCLSFHPCGDYM-VVGTDHFVLRLY----------------------SSDGRIYCSGSKDGDI 266 (344)
Q Consensus 215 -----~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~i 266 (344)
.......|...|.+++|+|++..+ ++++.|+.+++| +++|.+|++++.|+.|
T Consensus 112 ~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~I 191 (568)
T PTZ00420 112 KEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHM 191 (568)
T ss_pred cccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEE
Confidence 111234578889999999998765 688999999998 6889999999999999
Q ss_pred EEEeCCCCeEEeeecccCCCcc----EEEEEEccCCCEEEEEeCCC----cEEEEEcCC-CeeEEEeecCCCcCc
Q psy15157 267 KIWDGVSSKCVATFSKAHDGAE----ISSLTFTRNGKYLLSSGKDS----LVKLWELSS-ARCLIAYTGAGSMGQ 332 (344)
Q Consensus 267 ~iwd~~~~~~~~~~~~~~~~~~----v~~i~~~~~~~~l~s~~~dg----~i~vwd~~~-~~~~~~~~~~~~~~~ 332 (344)
+|||+++++.+..+. .|.+.. +....|++++.+|+++|.|+ .|+|||+++ ++++..+....+.+.
T Consensus 192 rIwD~Rsg~~i~tl~-gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~ 265 (568)
T PTZ00420 192 HIIDPRKQEIASSFH-IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAP 265 (568)
T ss_pred EEEECCCCcEEEEEe-cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccc
Confidence 999999999988876 444321 22234568999999988774 799999995 677777665554443
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-23 Score=165.30 Aligned_cols=198 Identities=21% Similarity=0.245 Sum_probs=153.0
Q ss_pred CCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 118 HKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
-.+.|.+++||| ...+++.||.||+||+|++... +...-.....|.++|.+++|+.+|..+++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~----------------g~~~~ka~~~~~~PvL~v~WsddgskVf~ 89 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS----------------GQLVPKAQQSHDGPVLDVCWSDDGSKVFS 89 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecC----------------CcccchhhhccCCCeEEEEEccCCceEEe
Confidence 457899999999 5567779999999999999631 11112455679999999999999999999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC--EEEEEeCCCEEEEE------------------------
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD--YMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~~i~~~------------------------ 250 (344)
|+.|+.+++||+.+++. .....|..+|.++.|-+... .|++|+.|.++++|
T Consensus 90 g~~Dk~~k~wDL~S~Q~---~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~ 166 (347)
T KOG0647|consen 90 GGCDKQAKLWDLASGQV---SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLY 166 (347)
T ss_pred eccCCceEEEEccCCCe---eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccC
Confidence 99999999999999854 34456899999999988765 88999999999999
Q ss_pred ----------------------------------------cCCCCEEEEEeCCCcEEEEeCCCC--eEEeeecccCC---
Q psy15157 251 ----------------------------------------SSDGRIYCSGSKDGDIKIWDGVSS--KCVATFSKAHD--- 285 (344)
Q Consensus 251 ----------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~--- 285 (344)
-.+....+.|+.+|.+-|..+..+ +.-.+|+.+..
T Consensus 167 pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~ 246 (347)
T KOG0647|consen 167 PMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS 246 (347)
T ss_pred ceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCC
Confidence 123344466777777777666654 22233332221
Q ss_pred ----CccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCcee
Q psy15157 286 ----GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQF 334 (344)
Q Consensus 286 ----~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 334 (344)
-..|++|+|+|.-..|+|.|.||++.+||-.....+++.+.+..+..+-
T Consensus 247 ~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc 299 (347)
T KOG0647|consen 247 VNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCC 299 (347)
T ss_pred CCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCcccee
Confidence 1358999999988899999999999999998888888777665554443
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-23 Score=172.43 Aligned_cols=187 Identities=25% Similarity=0.433 Sum_probs=165.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
-.++++...+....++||+.|..+.++|.. ..+.+.++.||...|+.+.++|+...+++++.
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~------------------s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa 281 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKP------------------SNQILATLKGHTKKITSVKFHKDLDTVITASA 281 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecc------------------hhhhhhhccCcceEEEEEEeccchhheeecCC
Confidence 457888888877899999999999999984 35678899999999999999999999999999
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------------cCCC
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------------SSDG 254 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------------~~~~ 254 (344)
|..|+||........ .....|..+|+.+..+|.|.||+.++.++...+. +|||
T Consensus 282 d~~i~vws~~~~s~~--~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDg 359 (506)
T KOG0289|consen 282 DEIIRVWSVPLSSEP--TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDG 359 (506)
T ss_pred cceEEeeccccccCc--cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCc
Confidence 999999998776533 3335688899999999999999999999887764 7999
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.+|.+|..||.++|||+.++..+..|.+ |. ++|.++.|+.+|.||+++++|+.|++||+|..+.+.+|.-..
T Consensus 360 Lifgtgt~d~~vkiwdlks~~~~a~Fpg-ht-~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~ 431 (506)
T KOG0289|consen 360 LIFGTGTPDGVVKIWDLKSQTNVAKFPG-HT-GPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDE 431 (506)
T ss_pred eEEeccCCCceEEEEEcCCccccccCCC-CC-CceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccc
Confidence 9999999999999999999998888874 55 589999999999999999999999999999998888887553
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-22 Score=151.74 Aligned_cols=227 Identities=21% Similarity=0.382 Sum_probs=167.6
Q ss_pred CccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 108 AQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 108 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
+.++...+..-...|++++|+|.|.+.+.|+...+.+|............. ........-....-+.|.+.|.|.+|
T Consensus 21 ~~f~~i~~l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~h---ea~~~pp~v~~kr~khhkgsiyc~~w 97 (350)
T KOG0641|consen 21 KHFEAINILEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAH---EAAKQPPSVLCKRNKHHKGSIYCTAW 97 (350)
T ss_pred cceEEEEEecchhheeeEEecCCCceEEeccCCceEEEEccccccCccccc---ccccCCCeEEeeeccccCccEEEEEe
Confidence 344444555677899999999999999999999999998764321110000 00001111223445678999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccc---cceeeeccccceEEEEEecC----CCEEEEEe-CCC--------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVR---KAHKTIQESTFVRCLSFHPC----GDYMVVGT-DHF-------------- 245 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~v~~~~~~~~----~~~l~~~~-~~~-------------- 245 (344)
+|.|.++++|+.|.+|++.-++...+. ..+.+.-|.+.|..++|-.+ |..+++++ .|.
T Consensus 98 s~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~ 177 (350)
T KOG0641|consen 98 SPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFH 177 (350)
T ss_pred cCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcce
Confidence 999999999999999999877654321 22344557888999999653 34444432 222
Q ss_pred --------EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-----CCccEEEEEEccCCCEEEEEeCCCcEEE
Q psy15157 246 --------VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-----DGAEISSLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 246 --------~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~l~s~~~dg~i~v 312 (344)
.+.+|+-+|-.+++|+.|.+|++||++-..++..+.... +.+.|.+++..|.|++|++|-.|....+
T Consensus 178 a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~l 257 (350)
T KOG0641|consen 178 ALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCML 257 (350)
T ss_pred eecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEE
Confidence 233457788999999999999999999988887765322 1246999999999999999999999999
Q ss_pred EEcCCCeeEEEeecCCCcCceeeee
Q psy15157 313 WELSSARCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 313 wd~~~~~~~~~~~~~~~~~~~~~~~ 337 (344)
||++.++.+..|-.|.+-.+++.|+
T Consensus 258 ydirg~r~iq~f~phsadir~vrfs 282 (350)
T KOG0641|consen 258 YDIRGGRMIQRFHPHSADIRCVRFS 282 (350)
T ss_pred EEeeCCceeeeeCCCccceeEEEeC
Confidence 9999999999999998887777654
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=174.54 Aligned_cols=198 Identities=19% Similarity=0.321 Sum_probs=162.5
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.++|.|++-+|+|.+|+.|+..|.+++|.+.+ +..+..+.+|-..|+|+.|+.|+.+|+|||
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelss------------------G~LL~v~~aHYQ~ITcL~fs~dgs~iiTgs 142 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSS------------------GILLNVLSAHYQSITCLKFSDDGSHIITGS 142 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEecc------------------ccHHHHHHhhccceeEEEEeCCCcEEEecC
Confidence 57899999999999999999999999999965 556667789999999999999999999999
Q ss_pred CCCcEEEEEcCC-------CccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEE-------------------
Q psy15157 199 KDKTVKMFDYSK-------SSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 199 ~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~------------------- 250 (344)
.||.|.+|++.+ ...........|.-+|+.+...+. ..++++++.|.++++|
T Consensus 143 kDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~a 222 (476)
T KOG0646|consen 143 KDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKA 222 (476)
T ss_pred CCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCccee
Confidence 999999998743 122233444567888999888764 5789999999999999
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCe----------------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEE
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSK----------------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVK 311 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~----------------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~ 311 (344)
+|.++.+++|+.+|.|.+.++.... .+..+.++..+..|+|++.+-||..|++|+.||.|+
T Consensus 223 v~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~Vc 302 (476)
T KOG0646|consen 223 VALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVC 302 (476)
T ss_pred EEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEE
Confidence 7889999999999999998865322 233344333335799999999999999999999999
Q ss_pred EEEcCCCeeEEEeecCCCcCcee
Q psy15157 312 LWELSSARCLIAYTGAGSMGQQF 334 (344)
Q Consensus 312 vwd~~~~~~~~~~~~~~~~~~~~ 334 (344)
|||+.+.++++++....++.+.+
T Consensus 303 vWdi~S~Q~iRtl~~~kgpVtnL 325 (476)
T KOG0646|consen 303 VWDIYSKQCIRTLQTSKGPVTNL 325 (476)
T ss_pred EEecchHHHHHHHhhhcccccee
Confidence 99999999999887444443333
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-23 Score=171.17 Aligned_cols=200 Identities=26% Similarity=0.310 Sum_probs=169.4
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..++.||.-.|+.+.|+++...+++++.|..|+||.... .........|..+|+.+..+|.|
T Consensus 254 l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~------------------~s~~~~~~~h~~~V~~ls~h~tg 315 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL------------------SSEPTSSRPHEEPVTGLSLHPTG 315 (506)
T ss_pred hhhccCcceEEEEEEeccchhheeecCCcceEEeecccc------------------ccCccccccccccceeeeeccCC
Confidence 456789999999999999999999999999999999853 22345667899999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.+|++++.||+..+.|++++............-.+++.+|||||..+.+|+.|+.+++|
T Consensus 316 eYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i 395 (506)
T KOG0289|consen 316 EYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAI 395 (506)
T ss_pred cEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEE
Confidence 99999999999999999999776555433344568999999999999999999999999
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC--CCeeEEEeec
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS--SARCLIAYTG 326 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~ 326 (344)
+-+|.++++++.|+.|++||+|..+...++..... ..+.++.|++.|.+|+.++.|=.|++++-. +.+++..+..
T Consensus 396 ~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~-~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~ 474 (506)
T KOG0289|consen 396 SFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEK-KEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELAD 474 (506)
T ss_pred EeccCceEEEEEecCCeEEEEEehhhcccceeecccc-ccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhh
Confidence 56899999999999999999999988887764433 469999999999999999888777777643 4566777766
Q ss_pred CCCc
Q psy15157 327 AGSM 330 (344)
Q Consensus 327 ~~~~ 330 (344)
|.+.
T Consensus 475 ~sg~ 478 (506)
T KOG0289|consen 475 HSGL 478 (506)
T ss_pred cccc
Confidence 6533
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-23 Score=182.36 Aligned_cols=191 Identities=22% Similarity=0.403 Sum_probs=160.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceE----EEecCCcCCeEEEEEcCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVI----RTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~~~~ 190 (344)
..+|.+.|+.++.+||+..++|||.|.+|++||..-.... +. ...+.+ ...-.-...|.|+++|||
T Consensus 450 i~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~-------~g---t~~k~lsl~~~rtLel~ddvL~v~~Spd 519 (888)
T KOG0306|consen 450 IRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSV-------PG---TQKKVLSLKHTRTLELEDDVLCVSVSPD 519 (888)
T ss_pred hhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEecc-------Cc---ccceeeeeccceEEeccccEEEEEEcCC
Confidence 3589999999999999999999999999999998632110 00 000100 011123567999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|+.+--|.+|+||-+++-+. -....+|.-+|.|+..+|+++.+++|+.|..+++|
T Consensus 520 gk~LaVsLLdnTVkVyflDtlKF--flsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~ 597 (888)
T KOG0306|consen 520 GKLLAVSLLDNTVKVYFLDTLKF--FLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMS 597 (888)
T ss_pred CcEEEEEeccCeEEEEEecceee--eeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeE
Confidence 99999999999999999988643 35567899999999999999999999999999999
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
-|....+++++.|+.|+-||...-++++.+.+++. .|++++.+|+|.+++++|.|.+|++|......
T Consensus 598 V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~--ev~cLav~~~G~~vvs~shD~sIRlwE~tde~ 667 (888)
T KOG0306|consen 598 VQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHS--EVWCLAVSPNGSFVVSSSHDKSIRLWERTDEI 667 (888)
T ss_pred EEEcccceeEEEecCcceEEeechhhhhhheeeccchh--eeeeeEEcCCCCeEEeccCCceeEeeeccCcc
Confidence 47788999999999999999999999999986553 69999999999999999999999999975543
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=161.45 Aligned_cols=186 Identities=22% Similarity=0.275 Sum_probs=156.2
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--CCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--SAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~ 192 (344)
-+.|.+.|.++...-.|+.|||++.|++|+|+.+++. .....+.++.+|.++|..++|.. .|.
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n---------------~~s~ll~~L~Gh~GPVwqv~wahPk~G~ 71 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNN---------------GQSKLLAELTGHSGPVWKVAWAHPKFGT 71 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCC---------------CCceeeeEecCCCCCeeEEeecccccCc
Confidence 4689999999999889999999999999999999741 22367889999999999999965 788
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEE--------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~-------------------- 250 (344)
+|++|+.||.|.||.-..++..+......|...|++++|.|. |-.|++++.||.|.++
T Consensus 72 iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~G 151 (299)
T KOG1332|consen 72 ILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIG 151 (299)
T ss_pred EeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccc
Confidence 999999999999999998877666666778899999999985 6788999999999986
Q ss_pred ------cCC---C-----------CEEEEEeCCCcEEEEeCCCCeEE--eeecccCCCccEEEEEEccCC----CEEEEE
Q psy15157 251 ------SSD---G-----------RIYCSGSKDGDIKIWDGVSSKCV--ATFSKAHDGAEISSLTFTRNG----KYLLSS 304 (344)
Q Consensus 251 ------~~~---~-----------~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~i~~~~~~----~~l~s~ 304 (344)
.|. | +.|++|+.|..|+||+..+++-+ .++. .|. ..|..++|.|.- .+|+++
T Consensus 152 vnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~-~H~-dwVRDVAwaP~~gl~~s~iAS~ 229 (299)
T KOG1332|consen 152 VNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLE-GHK-DWVRDVAWAPSVGLPKSTIASC 229 (299)
T ss_pred cceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhh-hcc-hhhhhhhhccccCCCceeeEEe
Confidence 111 2 56999999999999998886432 3344 454 489999999953 579999
Q ss_pred eCCCcEEEEEcCC
Q psy15157 305 GKDSLVKLWELSS 317 (344)
Q Consensus 305 ~~dg~i~vwd~~~ 317 (344)
+.||++.||-.+.
T Consensus 230 SqDg~viIwt~~~ 242 (299)
T KOG1332|consen 230 SQDGTVIIWTKDE 242 (299)
T ss_pred cCCCcEEEEEecC
Confidence 9999999998763
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-23 Score=171.20 Aligned_cols=178 Identities=21% Similarity=0.349 Sum_probs=142.2
Q ss_pred ccceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 109 QYETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 109 ~~~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
..+...|.||+..-+.++|++. .-.+++|+.|++|++||+...... .....+...+.+|...|..++|
T Consensus 167 ~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~-----------~~~~~p~~~~~~h~~~VeDV~~ 235 (422)
T KOG0264|consen 167 CRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKE-----------DKVVDPKTIFSGHEDVVEDVAW 235 (422)
T ss_pred CCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccC-----------CccccceEEeecCCcceehhhc
Confidence 3455678999998999999984 448999999999999999742111 1223456788999999999999
Q ss_pred cCCC-CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcE
Q psy15157 188 HPSA-PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDI 266 (344)
Q Consensus 188 ~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i 266 (344)
++.. .+|++++.|+.+.|||++++..........|...+.|++|+|-+ +.+||+||.|++|
T Consensus 236 h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~------------------~~ilAT~S~D~tV 297 (422)
T KOG0264|consen 236 HPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFN------------------EFILATGSADKTV 297 (422)
T ss_pred cccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCC------------------CceEEeccCCCcE
Confidence 9955 58999999999999999964334445556789999999999954 4556699999999
Q ss_pred EEEeCCCCe-EEeeecccCCCccEEEEEEccC-CCEEEEEeCCCcEEEEEcCC
Q psy15157 267 KIWDGVSSK-CVATFSKAHDGAEISSLTFTRN-GKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 267 ~iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~~ 317 (344)
.+||+|+.+ ++.++. .|. ..|..+.|+|+ ...|++++.|+.+.|||+..
T Consensus 298 ~LwDlRnL~~~lh~~e-~H~-dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 298 ALWDLRNLNKPLHTFE-GHE-DEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred EEeechhcccCceecc-CCC-cceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 999999864 455565 454 46999999995 56788999999999999965
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=182.44 Aligned_cols=196 Identities=21% Similarity=0.355 Sum_probs=167.3
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE-cCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF-HPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~ 190 (344)
...+..|.+.|+.++...+++-|+++|.|.+|++|+.... ..-+..++..|..-|.|++. .++
T Consensus 66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~----------------~~~c~stir~H~DYVkcla~~ak~ 129 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKD----------------NTFCMSTIRTHKDYVKCLAYIAKN 129 (735)
T ss_pred hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccC----------------cchhHhhhhcccchheeeeecccC
Confidence 4557899999999999999999999999999999998642 12456788999999999999 778
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcc--cc------ceeee-ccccceEEEEEecCCCEEEEEeCCCEEEEE-----------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSV--RK------AHKTI-QESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~--~~------~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------- 250 (344)
..+++|||.|+.|.+||++++.. .. .-... ++...|++++.++.|..|+.|+.++.+++|
T Consensus 130 ~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkL 209 (735)
T KOG0308|consen 130 NELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKL 209 (735)
T ss_pred ceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeee
Confidence 88999999999999999997622 11 11112 566789999999999999999999999999
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC-
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS- 317 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~- 317 (344)
+.+|+.++++|.||+|++||+...+|+.++. .|..+ |+++..+|+-.++++|+.||.|+.=|+++
T Consensus 210 rGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~-vH~e~-VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 210 RGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYI-VHKEG-VWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred eccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEE-eccCc-eEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 6789999999999999999999999999987 45444 99999999999999999999999999998
Q ss_pred CeeEEEee
Q psy15157 318 ARCLIAYT 325 (344)
Q Consensus 318 ~~~~~~~~ 325 (344)
.++...++
T Consensus 288 ~~~tlick 295 (735)
T KOG0308|consen 288 AKSTLICK 295 (735)
T ss_pred hhheEeec
Confidence 44444443
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=163.78 Aligned_cols=184 Identities=20% Similarity=0.306 Sum_probs=152.7
Q ss_pred ceeEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
+...+++|+..|.++.|++ +++.++++|.|++|++|+.+. ...++++.+|..-|...+|+|
T Consensus 96 Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r------------------~~Sv~Tf~gh~~~Iy~a~~sp 157 (311)
T KOG0277|consen 96 PIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNR------------------PNSVQTFNGHNSCIYQAAFSP 157 (311)
T ss_pred chhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCC------------------CcceEeecCCccEEEEEecCC
Confidence 4456789999999999998 667888999999999999853 456788999999999999999
Q ss_pred C-CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE-----------------
Q psy15157 190 S-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 190 ~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~----------------- 250 (344)
. .++++++|.||++++||++.... .+.+..|...+.|+.|+. +...+++|+.|+.|+.|
T Consensus 158 ~~~nlfas~Sgd~~l~lwdvr~~gk--~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~ 235 (311)
T KOG0277|consen 158 HIPNLFASASGDGTLRLWDVRSPGK--FMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGL 235 (311)
T ss_pred CCCCeEEEccCCceEEEEEecCCCc--eeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCce
Confidence 5 56999999999999999987643 334566888899999998 56677889999999999
Q ss_pred -------cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEc
Q psy15157 251 -------SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 251 -------~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~ 315 (344)
+| ....|++++.|-+++|||...+........+|.+ -+..+.|++ ++.++++++.|+.++||+-
T Consensus 236 AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtE-Fv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 236 AVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTE-FVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred EEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccce-EEeccccccccCceeeecccccceeeecc
Confidence 22 3457889999999999998866544444445654 689999998 6788999999999999984
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-22 Score=181.97 Aligned_cols=217 Identities=23% Similarity=0.311 Sum_probs=176.0
Q ss_pred CCCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcccc
Q psy15157 75 EPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAK 154 (344)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~ 154 (344)
++.+.+.|.+..++++|.|-...-+. ........+|.||-+-|+.+.|++.-.+++++|.|-+|+||+..
T Consensus 54 VRgv~FH~~qplFVSGGDDykIkVWn-----Yk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwq----- 123 (1202)
T KOG0292|consen 54 VRGVDFHPTQPLFVSGGDDYKIKVWN-----YKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQ----- 123 (1202)
T ss_pred cceeeecCCCCeEEecCCccEEEEEe-----cccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEecc-----
Confidence 44678899999999988664332211 11222345678999999999999999999999999999999994
Q ss_pred ccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcc---------------------
Q psy15157 155 SSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSV--------------------- 213 (344)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------------------- 213 (344)
+..++..+.||..-|.|..|+|...+++|+|-|.+|++||+..-+.
T Consensus 124 -------------sr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dL 190 (1202)
T KOG0292|consen 124 -------------SRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDL 190 (1202)
T ss_pred -------------CCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhh
Confidence 4678899999999999999999999999999999999999754211
Q ss_pred ------ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------------cCCCCEEEEEeC
Q psy15157 214 ------RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------------SSDGRIYCSGSK 262 (344)
Q Consensus 214 ------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------------~~~~~~l~~~~~ 262 (344)
...+...+|...|+-++|+|.-..|++|++|..|++| +|...++++.|.
T Consensus 191 fg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsE 270 (1202)
T KOG0292|consen 191 FGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSE 270 (1202)
T ss_pred cCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCC
Confidence 1112234678889999999999999999999999999 678899999999
Q ss_pred CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 263 DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 263 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
|++|+|||+.....++++...+. ..+.++-+|..+.+++|- |+-+.||.+..
T Consensus 271 DksirVwDm~kRt~v~tfrrend--RFW~laahP~lNLfAAgH-DsGm~VFkleR 322 (1202)
T KOG0292|consen 271 DKSIRVWDMTKRTSVQTFRREND--RFWILAAHPELNLFAAGH-DSGMIVFKLER 322 (1202)
T ss_pred CccEEEEecccccceeeeeccCC--eEEEEEecCCcceeeeec-CCceEEEEEcc
Confidence 99999999999999999975443 688899999998777665 44455666653
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=183.29 Aligned_cols=189 Identities=28% Similarity=0.489 Sum_probs=162.2
Q ss_pred ceeE-EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAY-VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~-~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.... +.||.+.|++++|..-+.++++|+.|.++++||+.+ +.+...+.+|.+.|.++...+
T Consensus 240 ~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s------------------g~C~~~l~gh~stv~~~~~~~ 301 (537)
T KOG0274|consen 240 LILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST------------------GECTHSLQGHTSSVRCLTIDP 301 (537)
T ss_pred EEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC------------------CcEEEEecCCCceEEEEEccC
Confidence 3344 789999999999988788999999999999999854 677889999999999998764
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
..+++|+.|.+|++|++.++....... +|..+|+++..+ +.++++|+.|+.|.+|
T Consensus 302 --~~~~sgs~D~tVkVW~v~n~~~l~l~~--~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~ 375 (537)
T KOG0274|consen 302 --FLLVSGSRDNTVKVWDVTNGACLNLLR--GHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVY 375 (537)
T ss_pred --ceEeeccCCceEEEEeccCcceEEEec--cccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEE
Confidence 478889999999999999887655443 388999999996 8999999999999999
Q ss_pred --cCCC-CEEEEEeCCCcEEEEeCCCC-eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 --SSDG-RIYCSGSKDGDIKIWDGVSS-KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 --~~~~-~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
-.++ ..+++|+.|+.|++||+++. +++..+. +|. .-+..+.+ .+++|++++.|+.|++||..++++++++.+
T Consensus 376 sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~-~h~-~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~ 451 (537)
T KOG0274|consen 376 SLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQ-GHT-SLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEG 451 (537)
T ss_pred EEEecCcceEEeeeeccceEeecCCchhhhhhhhc-CCc-cccccccc--ccceeEeccccccEEEeecccCceeeeecc
Confidence 2345 88999999999999999999 8998886 443 34655554 588999999999999999999999999999
Q ss_pred C
Q psy15157 327 A 327 (344)
Q Consensus 327 ~ 327 (344)
+
T Consensus 452 ~ 452 (537)
T KOG0274|consen 452 R 452 (537)
T ss_pred C
Confidence 4
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-23 Score=165.86 Aligned_cols=193 Identities=18% Similarity=0.322 Sum_probs=166.3
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~ 193 (344)
+.-|.++|.|+.||.|...+|+|+.||.|+||.+.++ .+++.+. .|...|+|+.|+.|+..
T Consensus 259 fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG------------------~ClRrFdrAHtkGvt~l~FSrD~Sq 320 (508)
T KOG0275|consen 259 FMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETG------------------QCLRRFDRAHTKGVTCLSFSRDNSQ 320 (508)
T ss_pred eeecccceEEEeecccHHHhhccCcCCcEEEEEEecc------------------hHHHHhhhhhccCeeEEEEccCcch
Confidence 3458899999999999999999999999999999764 3444554 79999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------- 250 (344)
+++++.|.++++.-+..+++.+.+ .+|...|+...|.++|.++++++.||++++|
T Consensus 321 iLS~sfD~tvRiHGlKSGK~LKEf--rGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv 398 (508)
T KOG0275|consen 321 ILSASFDQTVRIHGLKSGKCLKEF--RGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSV 398 (508)
T ss_pred hhcccccceEEEeccccchhHHHh--cCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeE
Confidence 999999999999999999887766 4688999999999999999999999999999
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc-CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA-HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
..+...++.+....+|+|.++ .|..+..+..+ .+++...+++.+|.|.++.+.++|+.++.|.+.+|+.-+++.-
T Consensus 399 ~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~V 477 (508)
T KOG0275|consen 399 ILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPV 477 (508)
T ss_pred EEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeec
Confidence 224566778889999999996 46777777643 3344566778999999999999999999999999999888876
Q ss_pred CC
Q psy15157 327 AG 328 (344)
Q Consensus 327 ~~ 328 (344)
|.
T Consensus 478 hE 479 (508)
T KOG0275|consen 478 HE 479 (508)
T ss_pred cc
Confidence 63
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=177.52 Aligned_cols=247 Identities=17% Similarity=0.190 Sum_probs=176.4
Q ss_pred ccCCCCCCccchhcccCCCceeee--cCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q psy15157 73 RMEPSIGLNPIQEILIGPGLDLEF--ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150 (344)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~ 150 (344)
+.+.++..+|.+..+++++++-.. +.-....+.... -......-...|++++|++.|..+++.+.....+|+|.+.
T Consensus 168 k~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~--fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG 245 (641)
T KOG0772|consen 168 KIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRS--FRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDG 245 (641)
T ss_pred eEEEEeeecCCCceeeeccccceEEEEecccccccchh--hhccCcccccccceeeecCCCCeEEEEecCcceeEEccCC
Confidence 345567788888888888865332 221111111111 1222233455899999999999998888888999999864
Q ss_pred ccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccc-cceeee---ccccc
Q psy15157 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVR-KAHKTI---QESTF 225 (344)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~-~~~~~~---~~~~~ 225 (344)
....-..... .-..-+...++|...++|.+|+|..+ .|+|++.||+++|||+...+.. .+++.. +..-.
T Consensus 246 ~~~~e~~KGD------QYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~ 319 (641)
T KOG0772|consen 246 FEIVEFSKGD------QYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVP 319 (641)
T ss_pred ceeeeeeccc------hhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccC
Confidence 3221111110 11112334578999999999999765 8999999999999999875422 222221 22346
Q ss_pred eEEEEEecCCCEEEEEeCCCEEEEE----------------------------cCCCCEEEEEeCCCcEEEEeCCCCe-E
Q psy15157 226 VRCLSFHPCGDYMVVGTDHFVLRLY----------------------------SSDGRIYCSGSKDGDIKIWDGVSSK-C 276 (344)
Q Consensus 226 v~~~~~~~~~~~l~~~~~~~~i~~~----------------------------~~~~~~l~~~~~dg~i~iwd~~~~~-~ 276 (344)
++.++|+++|+.|+.|..||.|.+| +++|++|++-+.|+++++||++..+ +
T Consensus 320 ~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkp 399 (641)
T KOG0772|consen 320 VTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKP 399 (641)
T ss_pred ceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccc
Confidence 8899999999999999999999999 7899999999999999999999764 4
Q ss_pred EeeecccCCCccEEEEEEccCCCEEEEEe------CCCcEEEEEcCCCeeEEEeecC
Q psy15157 277 VATFSKAHDGAEISSLTFTRNGKYLLSSG------KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 277 ~~~~~~~~~~~~v~~i~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+....+.....+-+.++|+|+.++|++|. ..|++++||..+-..+.++.-.
T Consensus 400 L~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~ 456 (641)
T KOG0772|consen 400 LNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS 456 (641)
T ss_pred hhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC
Confidence 44444333334567889999999999985 3578999999988888777654
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-22 Score=174.96 Aligned_cols=181 Identities=21% Similarity=0.318 Sum_probs=158.1
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
.+..+.+|.+-|+|++.+|...+++|+|.|-+|++||.+ ..+.+.+++.+|..-|.+++|+|.
T Consensus 89 kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we-----------------~~wa~~qtfeGH~HyVMqv~fnPk 151 (794)
T KOG0276|consen 89 KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWE-----------------NEWACEQTFEGHEHYVMQVAFNPK 151 (794)
T ss_pred eeEEeeccccceeeeeecCCCCeEEecCCccEEEEeecc-----------------CceeeeeEEcCcceEEEEEEecCC
Confidence 466789999999999999999999999999999999997 557889999999999999999995
Q ss_pred -CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC--CEEEEEeCCCEEEEE-----------------
Q psy15157 191 -APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG--DYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 191 -~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~~~i~~~----------------- 250 (344)
.+.++|++-|++|++|.+...... +...+|...|+|+.+-+.| .++++|++|..+++|
T Consensus 152 D~ntFaS~sLDrTVKVWslgs~~~n--fTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~N 229 (794)
T KOG0276|consen 152 DPNTFASASLDRTVKVWSLGSPHPN--FTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNN 229 (794)
T ss_pred CccceeeeeccccEEEEEcCCCCCc--eeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhccccc
Confidence 459999999999999999877544 5556899999999998754 699999999999999
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEE
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v 312 (344)
.|.-.++++|+.||+++||+..+-+...++.-+- .++.+++-.+.++.++.|.+.|.|.+
T Consensus 230 vs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gl--eRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 230 VSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGL--ERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred ceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCC--ceEEEEeecCCCCeEEEeccCCcEEE
Confidence 5677899999999999999999888777775333 46999999998888888888877644
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-23 Score=164.32 Aligned_cols=210 Identities=17% Similarity=0.334 Sum_probs=166.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..+|-.|.+.|+++.|+|...+|++|+.|++|++||+.+...+. .........+|.++.|+|.|
T Consensus 165 IRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKr----------------A~K~~qd~~~vrsiSfHPsG 228 (430)
T KOG0640|consen 165 IRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKR----------------AFKVFQDTEPVRSISFHPSG 228 (430)
T ss_pred EeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHH----------------HHHHhhccceeeeEeecCCC
Confidence 34567999999999999999999999999999999996422111 11112245679999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccc-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKA-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
.+|+.|..-.++++||+++-++... ....+|...|+++.+++.|+..++++.||.|++|
T Consensus 229 efllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsev 308 (430)
T KOG0640|consen 229 EFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEV 308 (430)
T ss_pred ceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCcee
Confidence 9999999999999999999765322 2334678899999999999999999999999999
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCc---cEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCeeE
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA---EISSLTFTRNGKYLLSSG-KDSLVKLWELSSARCL 321 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~ 321 (344)
..+|+++++.+.|..+++|.+.+++++..+.+....+ .-+...|+....|++.-. ..+.+.-||.+++..+
T Consensus 309 cSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~ 388 (430)
T KOG0640|consen 309 CSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRV 388 (430)
T ss_pred eeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhh
Confidence 5789999999999999999999999999887542211 134456888888877655 4577999999998776
Q ss_pred EEee-cCCCcCceeeee
Q psy15157 322 IAYT-GAGSMGQQFELT 337 (344)
Q Consensus 322 ~~~~-~~~~~~~~~~~~ 337 (344)
..+. ||.+..+++..+
T Consensus 389 ~l~slgHn~a~R~i~HS 405 (430)
T KOG0640|consen 389 ALLSLGHNGAVRWIVHS 405 (430)
T ss_pred hhcccCCCCCceEEEeC
Confidence 6654 666666665543
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-23 Score=161.64 Aligned_cols=204 Identities=18% Similarity=0.242 Sum_probs=153.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCC----------------------------
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEP---------------------------- 162 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~---------------------------- 162 (344)
....+.||++.|+|++.+.+.++++||+.|.++++||++++...........
T Consensus 44 rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~ 123 (327)
T KOG0643|consen 44 RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVS 123 (327)
T ss_pred eeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEE
Confidence 3456789999999999999999999999999999999998766544332210
Q ss_pred -------cCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC
Q psy15157 163 -------QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235 (344)
Q Consensus 163 -------~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 235 (344)
..+.....+...+..+.+.++.+-|.|-+..|++|..||.|.+||++++..... ....|...|+.++++++.
T Consensus 124 ~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~-s~~~h~~~Ind~q~s~d~ 202 (327)
T KOG0643|consen 124 VFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVD-SDEEHSSKINDLQFSRDR 202 (327)
T ss_pred EEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeee-chhhhccccccccccCCc
Confidence 011224455677778889999999999999999999999999999999754322 224477789999999999
Q ss_pred CEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCCCc--EEEEeCCCC------------eEEee
Q psy15157 236 DYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKDGD--IKIWDGVSS------------KCVAT 279 (344)
Q Consensus 236 ~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~--i~iwd~~~~------------~~~~~ 279 (344)
.++++++.|.+.++| +|.-..++.|+.-.. |.-=+.+.| +.+..
T Consensus 203 T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigr 282 (327)
T KOG0643|consen 203 TYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGR 282 (327)
T ss_pred ceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhcc
Confidence 999999999999888 354455555443221 111122223 23333
Q ss_pred ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 280 FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 280 ~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
++ +|- ++|++++|+|+|+..++|++||.||+.-+..
T Consensus 283 vk-GHF-GPINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 283 VK-GHF-GPINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred cc-ccc-cCcceeEECCCCcccccCCCCceEEEEEecc
Confidence 44 454 5899999999999999999999999986644
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-21 Score=149.60 Aligned_cols=186 Identities=24% Similarity=0.344 Sum_probs=152.1
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC---
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS--- 190 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--- 190 (344)
.-..|++.|.|.+|||+|+++++|+.|.+|++..++...+.. . ..-..+..|.+.|..++|..+
T Consensus 84 r~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~-----------~--g~dle~nmhdgtirdl~fld~~~s 150 (350)
T KOG0641|consen 84 RNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNA-----------T--GHDLEFNMHDGTIRDLAFLDDPES 150 (350)
T ss_pred eccccCccEEEEEecCccCeEEecCCCceEEEEecccccccc-----------c--CcceeeeecCCceeeeEEecCCCc
Confidence 346899999999999999999999999999998876422111 1 123467789999999999653
Q ss_pred -CCEEEEEe-CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 191 -APILASGS-KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 -~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
+.+|++++ .|..|++-|...++... ...+|.+-|.++ ++=+|-.+++|+.|.+|++|
T Consensus 151 ~~~il~s~gagdc~iy~tdc~~g~~~~--a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~ 227 (350)
T KOG0641|consen 151 GGAILASAGAGDCKIYITDCGRGQGFH--ALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDG 227 (350)
T ss_pred CceEEEecCCCcceEEEeecCCCCcce--eecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCC
Confidence 44777765 47888888888775443 334677767664 34578999999999999999
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+|.|++|++|..|....+||++.++.++.+. .|. +.|.++.|+|...||++|+.|..|++-|+..
T Consensus 228 glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~-phs-adir~vrfsp~a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 228 GLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH-PHS-ADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred CcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC-CCc-cceeEEEeCCCceEEEEecccceEEEeeccc
Confidence 7999999999999999999999999999996 343 5799999999999999999999999999964
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-22 Score=161.40 Aligned_cols=173 Identities=24% Similarity=0.415 Sum_probs=144.5
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCC
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDK 201 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 201 (344)
..|+.|++.|.+||+|..||.|.|||+.+ ...-+.+.+|..+|++++|+++|+.|+|+|.|.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T------------------~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~ 87 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDT------------------FRIARMLSAHVRPITSLCWSRDGRKLLTSSRDW 87 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccc------------------cchhhhhhccccceeEEEecCCCCEeeeecCCc
Confidence 88999999999999999999999999965 345667889999999999999999999999999
Q ss_pred cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe--C---------CCEEE-----------------EEcCC
Q psy15157 202 TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT--D---------HFVLR-----------------LYSSD 253 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~---------~~~i~-----------------~~~~~ 253 (344)
.|.+||+..+.....+. -..+|+...|+|.....++++ . ++.-. +|++.
T Consensus 88 si~lwDl~~gs~l~rir---f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~ 164 (405)
T KOG1273|consen 88 SIKLWDLLKGSPLKRIR---FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRR 164 (405)
T ss_pred eeEEEeccCCCceeEEE---ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCC
Confidence 99999999997655444 457789999998544333321 1 11111 24778
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
|+++++|...|.+.++|..+.+++..++.... ..|.++.++..|++|+.-+.|..||.|+++
T Consensus 165 g~yIitGtsKGkllv~~a~t~e~vas~rits~-~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 165 GKYIITGTSKGKLLVYDAETLECVASFRITSV-QAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred CCEEEEecCcceEEEEecchheeeeeeeechh-eeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 99999999999999999999999988874432 359999999999999999999999999986
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-23 Score=160.91 Aligned_cols=208 Identities=17% Similarity=0.327 Sum_probs=176.8
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
-..++.||++.|+...++.+....|+++.|-+-+|||.-++.. +.. ..|..-|..++|+.|
T Consensus 51 wigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgde------------------lhs-f~hkhivk~~af~~d 111 (334)
T KOG0278|consen 51 WIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDE------------------LHS-FEHKHIVKAVAFSQD 111 (334)
T ss_pred cEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhh------------------hhh-hhhhheeeeEEeccc
Confidence 3567899999999999999999999999999999999865422 222 348888999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
.+.|++|+.+..++|||++..+. ......+|...|..+.|....+.|++.+.++.|++|
T Consensus 112 s~~lltgg~ekllrvfdln~p~A-pp~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSl 190 (334)
T KOG0278|consen 112 SNYLLTGGQEKLLRVFDLNRPKA-PPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSL 190 (334)
T ss_pred chhhhccchHHHhhhhhccCCCC-CchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcce
Confidence 99999999999999999988654 334456788999999999999999999999999999
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe-ecC
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY-TGA 327 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~ 327 (344)
+++|+++.+ ...+.|.+||..+-..+..+.-.. .|.+..++|+...+++|++|..++.||..+|+.+..| ++|
T Consensus 191 Evs~dG~ilTi-a~gssV~Fwdaksf~~lKs~k~P~---nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh 266 (334)
T KOG0278|consen 191 EVSQDGRILTI-AYGSSVKFWDAKSFGLLKSYKMPC---NVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGH 266 (334)
T ss_pred eeccCCCEEEE-ecCceeEEeccccccceeeccCcc---ccccccccCCCceEEecCcceEEEEEeccCCceeeecccCC
Confidence 678888754 566789999999998888776433 4899999999999999999999999999999999997 555
Q ss_pred CCcCceeeeeeeccCCC
Q psy15157 328 GSMGQQFELTLTVDADV 344 (344)
Q Consensus 328 ~~~~~~~~~~~~~~~~~ 344 (344)
. +...++.|+||+++
T Consensus 267 ~--gpVhcVrFSPdGE~ 281 (334)
T KOG0278|consen 267 F--GPVHCVRFSPDGEL 281 (334)
T ss_pred C--CceEEEEECCCCce
Confidence 4 45677888998875
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=170.77 Aligned_cols=200 Identities=25% Similarity=0.384 Sum_probs=169.4
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCCEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 196 (344)
+...|+++.|+++|.+||+|..+|.|.|||..+ ...+..+.+ |...|-+++|. +..+.+
T Consensus 216 ~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~------------------~k~~~~~~~~h~~rvg~laW~--~~~lss 275 (484)
T KOG0305|consen 216 GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKE------------------QKKTRTLRGSHASRVGSLAWN--SSVLSS 275 (484)
T ss_pred CCCceEEEEECCCCCEEEEeecCCeEEEEehhh------------------ccccccccCCcCceeEEEecc--CceEEE
Confidence 478999999999999999999999999999864 344566677 99999999998 668999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------------C
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------------S 252 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------------~ 252 (344)
|+.|+.|..+|++..+.... ....|...|..+.|++++.++++|+.|+.+.+|+ -
T Consensus 276 Gsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~ 354 (484)
T KOG0305|consen 276 GSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPW 354 (484)
T ss_pred ecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCC
Confidence 99999999999998765544 3566888999999999999999999999999993 2
Q ss_pred CCCEEEEE--eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE--eCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 253 DGRIYCSG--SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS--GKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 253 ~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~--~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
...+||+| +.|+.|++||..++..+..+.. ++.|.++.|++..+-|+++ -.++.|.||+..+-+.+..+.+|.
T Consensus 355 q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt---gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~ 431 (484)
T KOG0305|consen 355 QSGLLATGGGSADRCIKFWNTNTGARIDSVDT---GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHT 431 (484)
T ss_pred ccCceEEcCCCcccEEEEEEcCCCcEeccccc---CCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCc
Confidence 45667775 5789999999999999888753 3579999999988777764 467789999999999999999986
Q ss_pred CcCceeeeeeeccCC
Q psy15157 329 SMGQQFELTLTVDAD 343 (344)
Q Consensus 329 ~~~~~~~~~~~~~~~ 343 (344)
.- ...+.+++|++
T Consensus 432 ~R--Vl~la~SPdg~ 444 (484)
T KOG0305|consen 432 SR--VLYLALSPDGE 444 (484)
T ss_pred ce--eEEEEECCCCC
Confidence 55 77777777754
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=156.81 Aligned_cols=184 Identities=20% Similarity=0.323 Sum_probs=145.5
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
....++.||...|+.++.+|-++.+++++.|++|++||++...+. -+. +...-..++|.|
T Consensus 91 kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cq----------------g~l----~~~~~pi~AfDp 150 (311)
T KOG1446|consen 91 KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQ----------------GLL----NLSGRPIAAFDP 150 (311)
T ss_pred ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCc----------------eEE----ecCCCcceeECC
Confidence 346678999999999999999999999999999999999742111 111 222334679999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcc--ccceeee-ccccceEEEEEecCCCEEEEEeCCCEEEEE----------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSV--RKAHKTI-QESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------- 250 (344)
+|-++|++.....|++||++.-.. ...+... ......+.+.|+|+|++++.++..+.+.+.
T Consensus 151 ~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~ 230 (311)
T KOG1446|consen 151 EGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPN 230 (311)
T ss_pred CCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccC
Confidence 999999998888999999987532 2222222 345678899999999999999999888774
Q ss_pred ----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 ----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.|+++++++|+.||+|++|++++++.+..+.+.+ ..++.++.|+|.-..++++ +..+.+|=..
T Consensus 231 ~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~-~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~ 303 (311)
T KOG1446|consen 231 AGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPN-GGPVSCVRFNPRYAMFVSA--SSNLVFWLPD 303 (311)
T ss_pred CCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCC-CCCccccccCCceeeeeec--CceEEEEecc
Confidence 7999999999999999999999999999998554 4679999999876555555 4567788554
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7e-22 Score=158.96 Aligned_cols=200 Identities=21% Similarity=0.278 Sum_probs=154.3
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccc------------------cCCCCC-----------
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKS------------------SMESSE----------- 161 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~------------------~~~~~~----------- 161 (344)
....|.+|.+.|++++|+.||++|||++.|++|+||+++...... ..++..
T Consensus 78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence 345678999999999999999999999999999999985311000 000000
Q ss_pred ------------------------------------------------------CcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 162 ------------------------------------------------------PQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 162 ------------------------------------------------------~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
..++. .++.+.++......-...+.
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~l-kGq~L~~idtnq~~n~~aav 236 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDL-KGQLLQSIDTNQSSNYDAAV 236 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEec-CCceeeeeccccccccceee
Confidence 00000 12333333334445567789
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCC---C---ccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSK---S---SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~---~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------- 250 (344)
+|+|+++++++.--.|++|.+-- + +..+.+...+|...|..++|+++...+++.+.||..++|
T Consensus 237 SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qD 316 (420)
T KOG2096|consen 237 SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQD 316 (420)
T ss_pred CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCC
Confidence 99999999999999999998632 2 234566777899999999999999999999999999999
Q ss_pred -----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 251 -----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 251 -----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
+|+|..|+. +....+++|..++++....+...|.+ .|.+|+|+++|++++++| |
T Consensus 317 pk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~-s~gs~l~~~~se~g~~~~~~e~~h~~-~Is~is~~~~g~~~atcG-d 393 (420)
T KOG2096|consen 317 PKILKEGSAPLHAAGSEPVRLELSPSGDSLAV-SFGSDLKVFASEDGKDYPELEDIHST-TISSISYSSDGKYIATCG-D 393 (420)
T ss_pred chHhhcCCcchhhcCCCceEEEeCCCCcEEEe-ecCCceEEEEcccCccchhHHHhhcC-ceeeEEecCCCcEEeeec-c
Confidence 788888875 45668999999999988888877764 699999999999999998 6
Q ss_pred CcEEEEE
Q psy15157 308 SLVKLWE 314 (344)
Q Consensus 308 g~i~vwd 314 (344)
..++++.
T Consensus 394 r~vrv~~ 400 (420)
T KOG2096|consen 394 RYVRVIR 400 (420)
T ss_pred eeeeeec
Confidence 7777765
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-23 Score=184.72 Aligned_cols=184 Identities=28% Similarity=0.514 Sum_probs=155.7
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
|.+|..+|.|+.|+.+..++++|+.+|+|++||++. ...++++.+|...+.++.|+|-+.++
T Consensus 66 ~~~hespIeSl~f~~~E~LlaagsasgtiK~wDlee------------------Ak~vrtLtgh~~~~~sv~f~P~~~~~ 127 (825)
T KOG0267|consen 66 LTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEE------------------AKIVRTLTGHLLNITSVDFHPYGEFF 127 (825)
T ss_pred eeccCCcceeeecCcchhhhcccccCCceeeeehhh------------------hhhhhhhhccccCcceeeeccceEEe
Confidence 789999999999999999999999999999999964 45577999999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++|+.|+.+++||++...+...+ .+|...+.++.|+|+|++++ .|+.|..++|||...|
T Consensus 128 a~gStdtd~~iwD~Rk~Gc~~~~--~s~~~vv~~l~lsP~Gr~v~-------------------~g~ed~tvki~d~~ag 186 (825)
T KOG0267|consen 128 ASGSTDTDLKIWDIRKKGCSHTY--KSHTRVVDVLRLSPDGRWVA-------------------SGGEDNTVKIWDLTAG 186 (825)
T ss_pred ccccccccceehhhhccCceeee--cCCcceeEEEeecCCCceee-------------------ccCCcceeeeeccccc
Confidence 99999999999999866554433 44788899999999666555 7788999999999999
Q ss_pred eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeecc
Q psy15157 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (344)
+....|. .|. ..+.++.|+|..-.+++||.|++|++||+++-+.+...+.. .....+..|.++
T Consensus 187 k~~~ef~-~~e-~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~--~~~v~~~~fn~~ 249 (825)
T KOG0267|consen 187 KLSKEFK-SHE-GKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPE--TDGVRSLAFNPD 249 (825)
T ss_pred ccccccc-ccc-ccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCc--cCCceeeeecCC
Confidence 9999997 454 46999999999889999999999999999988887776655 333344444444
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-21 Score=154.25 Aligned_cols=200 Identities=17% Similarity=0.277 Sum_probs=160.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.+.|..+.|+|.++.|+.+++||++++||+... .+.....|..++.+++|.++ ..+++|+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~-------------------~l~~~~~~~~plL~c~F~d~-~~~~~G~ 72 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN-------------------SLKLKFKHGAPLLDCAFADE-STIVTGG 72 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccch-------------------hhhhheecCCceeeeeccCC-ceEEEec
Confidence 568999999999999999999999999999632 23334468999999999974 5789999
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC--------------------CCCEEE
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--------------------DGRIYC 258 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~--------------------~~~~l~ 258 (344)
.||.|+.+|++++.. .....|..+++|+.+.+....+++|+.|+.|++|++ .|+.|+
T Consensus 73 ~dg~vr~~Dln~~~~---~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g~~Lv 149 (323)
T KOG1036|consen 73 LDGQVRRYDLNTGNE---DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSGNRLV 149 (323)
T ss_pred cCceEEEEEecCCcc---eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEeccCCEEE
Confidence 999999999998743 445568899999999999999999999999999944 577889
Q ss_pred EEeCCCcEEEEeCCCCeE---------------Eeeec--------------------------------ccCC------
Q psy15157 259 SGSKDGDIKIWDGVSSKC---------------VATFS--------------------------------KAHD------ 285 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~---------------~~~~~--------------------------------~~~~------ 285 (344)
.|+.|..+.+||+++... +..+. ..|.
T Consensus 150 Vg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~ 229 (323)
T KOG1036|consen 150 VGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDT 229 (323)
T ss_pred EeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCc
Confidence 999999999999876432 11110 0010
Q ss_pred --CccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 286 --GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 286 --~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..+|++|+|+|--..|+|||.||.|.+||+.+.+.+..|... .++..+++|+.++.
T Consensus 230 ~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~--~~SI~slsfs~dG~ 287 (323)
T KOG1036|consen 230 EIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKY--ETSISSLSFSMDGS 287 (323)
T ss_pred eEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCC--CCceEEEEeccCCC
Confidence 135999999999889999999999999999999888887665 44556666666654
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-21 Score=161.66 Aligned_cols=210 Identities=17% Similarity=0.257 Sum_probs=163.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 192 (344)
.+..|.-+|.|++++|++.+.++++.||+|.-|++.++.............. ..+.+...- .+|...+.+++.++|++
T Consensus 137 ~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k-~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 137 VIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLK-SHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred eeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhh-hccCCCCcccccccceeEEEEEcCCCc
Confidence 4578999999999999999999999999999999987654321111100000 011111111 48999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc---------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS--------------------- 251 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~--------------------- 251 (344)
+|++|+.|..|.|||.++.+....+ ..|...|.+++|-.....+++++.|..+++|+
T Consensus 216 ylatgg~d~~v~Iw~~~t~ehv~~~--~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 216 YLATGGRDRHVQIWDCDTLEHVKVF--KGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGID 293 (479)
T ss_pred EEEecCCCceEEEecCcccchhhcc--cccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeec
Confidence 9999999999999999998766554 56888999999999999999999999999992
Q ss_pred --CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 252 --SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 252 --~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
..++.+-+|+.|+++++|++.... +.+..++. +.+-|++|-. ...+++|+++|.|.+|++.+.+++.+.+-..+
T Consensus 294 aL~reR~vtVGgrDrT~rlwKi~ees--qlifrg~~-~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHg 369 (479)
T KOG0299|consen 294 ALSRERCVTVGGRDRTVRLWKIPEES--QLIFRGGE-GSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHG 369 (479)
T ss_pred hhcccceEEeccccceeEEEeccccc--eeeeeCCC-CCeeeEEEec-ccceeeccCCceEEEeeecccCceeEeecccc
Confidence 234566677799999999994332 22333444 4699999984 56789999999999999999999999875443
Q ss_pred c
Q psy15157 330 M 330 (344)
Q Consensus 330 ~ 330 (344)
.
T Consensus 370 v 370 (479)
T KOG0299|consen 370 V 370 (479)
T ss_pred c
Confidence 3
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=176.69 Aligned_cols=192 Identities=27% Similarity=0.461 Sum_probs=165.2
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE-ecCCcCCeEEEEEcCCCCEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT-LYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.|...+.|..|. +.++++++.|.+|++||..+ ...+.. +.+|.+.|.++++...+.+++
T Consensus 206 ~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~------------------~~~i~~~l~GH~g~V~~l~~~~~~~~lv 265 (537)
T KOG0274|consen 206 TDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNN------------------GYLILTRLVGHFGGVWGLAFPSGGDKLV 265 (537)
T ss_pred cCcchhhhheee--cCeEEecCCCceeEEeeccc------------------ceEEEeeccCCCCCceeEEEecCCCEEE
Confidence 367788999998 67899999999999999853 334445 999999999999988788999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------cCCC
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------SSDG 254 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------~~~~ 254 (344)
+|+.|.++++||..++.+...+ .+|...+.++.. ...+++.|+.|.+|++| .-++
T Consensus 266 sgS~D~t~rvWd~~sg~C~~~l--~gh~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~ 341 (537)
T KOG0274|consen 266 SGSTDKTERVWDCSTGECTHSL--QGHTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDE 341 (537)
T ss_pred EEecCCcEEeEecCCCcEEEEe--cCCCceEEEEEc--cCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEecC
Confidence 9999999999999999776554 468888888776 45678888999999999 3457
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC-eeEEEeecCCCcCce
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-RCLIAYTGAGSMGQQ 333 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~ 333 (344)
.++++|+.|+.|++||..+++++..+.+ |. ..|.++.+... .++++|+.|++|++||+++. +|+.++.+|.+....
T Consensus 342 ~~lvsgs~d~~v~VW~~~~~~cl~sl~g-H~-~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~ 418 (537)
T KOG0274|consen 342 PLLVSGSYDGTVKVWDPRTGKCLKSLSG-HT-GRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSS 418 (537)
T ss_pred CEEEEEecCceEEEEEhhhceeeeeecC-Cc-ceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccccc
Confidence 8999999999999999999999999985 55 47999988755 89999999999999999999 999999999887654
Q ss_pred ee
Q psy15157 334 FE 335 (344)
Q Consensus 334 ~~ 335 (344)
+.
T Consensus 419 l~ 420 (537)
T KOG0274|consen 419 LL 420 (537)
T ss_pred cc
Confidence 33
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.1e-22 Score=181.04 Aligned_cols=201 Identities=22% Similarity=0.329 Sum_probs=155.6
Q ss_pred ecCCCceEEEEECCCCCEEEEEe--CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGS--VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
..+...|.+++.+|+|..+|||+ .||.++||+.+....... ..+..-.+.+..+..|.+.|+|+.|+|||.+
T Consensus 10 ~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~------~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~ 83 (942)
T KOG0973|consen 10 NHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKE------EKNENLPKHLCTMDDHDGSVNCVRFSPDGSY 83 (942)
T ss_pred ccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhh------hhhcccchhheeeccccCceeEEEECCCCCe
Confidence 34456799999999999999999 899999999864321110 0111124567788899999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCc----------------cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEE
Q psy15157 194 LASGSKDKTVKMFDYSKSS----------------VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY 257 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~----------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l 257 (344)
||+|+.|+.|.||...... ........+|...|..++|+| ++.++
T Consensus 84 lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-------------------~~~~l 144 (942)
T KOG0973|consen 84 LASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-------------------DDSLL 144 (942)
T ss_pred EeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-------------------CccEE
Confidence 9999999999999987310 011122334566666666666 56666
Q ss_pred EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC----CCcCce
Q psy15157 258 CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA----GSMGQQ 333 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~ 333 (344)
++++.|++|.|||.++.+.+..+. .|. +.|..+.|+|-|+||++-++|++|+||++.+-.+.+.+.++ ......
T Consensus 145 vS~s~DnsViiwn~~tF~~~~vl~-~H~-s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f 222 (942)
T KOG0973|consen 145 VSVSLDNSVIIWNAKTFELLKVLR-GHQ-SLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFF 222 (942)
T ss_pred EEecccceEEEEccccceeeeeee-ccc-ccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCccee
Confidence 689999999999999998888887 444 47999999999999999999999999998887787777765 334566
Q ss_pred eeeeeeccCC
Q psy15157 334 FELTLTVDAD 343 (344)
Q Consensus 334 ~~~~~~~~~~ 343 (344)
..++++||++
T Consensus 223 ~RlSWSPDG~ 232 (942)
T KOG0973|consen 223 LRLSWSPDGH 232 (942)
T ss_pred eecccCCCcC
Confidence 6778888876
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-22 Score=166.22 Aligned_cols=179 Identities=24% Similarity=0.353 Sum_probs=148.8
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+|.||++.|+++.|......+++|+.|.+|++||+.+..+.. ++ .....+.+|..+
T Consensus 253 ~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~k------------------t~-l~~S~cnDI~~~-- 311 (459)
T KOG0288|consen 253 LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSK------------------TV-LPGSQCNDIVCS-- 311 (459)
T ss_pred hhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheec------------------cc-cccccccceEec--
Confidence 345688999999999999877779999999999999997532221 11 122344555554
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
...++||-.|++|++||++......... -.+.|+++..+++|..+.+++.|.++.+.
T Consensus 312 ~~~~~SgH~DkkvRfwD~Rs~~~~~sv~---~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~as 388 (459)
T KOG0288|consen 312 ISDVISGHFDKKVRFWDIRSADKTRSVP---LGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCAS 388 (459)
T ss_pred ceeeeecccccceEEEeccCCceeeEee---cCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccccc
Confidence 5578999999999999999886654443 34589999999999999999999888874
Q ss_pred -------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEE
Q psy15157 251 -------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313 (344)
Q Consensus 251 -------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vw 313 (344)
+|++.|+++||.||.|+||++.++++...+...+....|+++.|+|.|.+|++++.++.+.+|
T Consensus 389 DwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 389 DWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred ccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 899999999999999999999999999888866665569999999999999999999999999
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=164.31 Aligned_cols=173 Identities=21% Similarity=0.354 Sum_probs=139.3
Q ss_pred CccceeEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE
Q psy15157 108 AQYETAYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186 (344)
Q Consensus 108 ~~~~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 186 (344)
.......+.+|.+.|..++|++ +..+|++++.|+.+.|||+++. ..++.....+|.+.|+|++
T Consensus 216 ~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~----------------~~~~~~~~~ah~~~vn~~~ 279 (422)
T KOG0264|consen 216 VVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN----------------TSKPSHSVKAHSAEVNCVA 279 (422)
T ss_pred cccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC----------------CCCCcccccccCCceeEEE
Confidence 3455677899999999999998 6679999999999999999741 2344566789999999999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCc
Q psy15157 187 FHPS-APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGD 265 (344)
Q Consensus 187 ~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~ 265 (344)
|+|- +.+|||||.|++|++||+|+-+. ..+...+|...|.++.|+|... ..|++++.|+.
T Consensus 280 fnp~~~~ilAT~S~D~tV~LwDlRnL~~-~lh~~e~H~dev~~V~WSPh~e------------------tvLASSg~D~r 340 (422)
T KOG0264|consen 280 FNPFNEFILATGSADKTVALWDLRNLNK-PLHTFEGHEDEVFQVEWSPHNE------------------TVLASSGTDRR 340 (422)
T ss_pred eCCCCCceEEeccCCCcEEEeechhccc-CceeccCCCcceEEEEeCCCCC------------------ceeEecccCCc
Confidence 9995 45899999999999999998764 5566778999999999999644 45558889999
Q ss_pred EEEEeCCCCeEEe-------------eecccCCCccEEEEEEccCCCE-EEEEeCCCcEEEEEcC
Q psy15157 266 IKIWDGVSSKCVA-------------TFSKAHDGAEISSLTFTRNGKY-LLSSGKDSLVKLWELS 316 (344)
Q Consensus 266 i~iwd~~~~~~~~-------------~~~~~~~~~~v~~i~~~~~~~~-l~s~~~dg~i~vwd~~ 316 (344)
+.+||+..-...+ -+.++|. +.|+.+.|+|+..+ |++.++|+.+.||++.
T Consensus 341 l~vWDls~ig~eq~~eda~dgppEllF~HgGH~-~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 341 LNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHT-AKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred EEEEeccccccccChhhhccCCcceeEEecCcc-cccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 9999986432221 1223454 57999999998776 5677899999999985
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.9e-22 Score=161.85 Aligned_cols=175 Identities=23% Similarity=0.340 Sum_probs=140.4
Q ss_pred CCCccceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCc-eEEEecCCcCCeE
Q psy15157 106 EPAQYETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP-VIRTLYDHIEEVT 183 (344)
Q Consensus 106 ~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~ 183 (344)
.....+...+.+|++.=+.++|||- ...|+||.--+.|++|...++. +. -...+.+|+..|.
T Consensus 198 ~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~----------------W~vd~~Pf~gH~~SVE 261 (440)
T KOG0302|consen 198 DSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGS----------------WKVDQRPFTGHTKSVE 261 (440)
T ss_pred ccccCceEEecccCccceeeecccccccccccCccccceEeeeeccCc----------------eeecCccccccccchh
Confidence 3455567788999999999999993 2358888888899999886421 11 1234567999999
Q ss_pred EEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeC
Q psy15157 184 CLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSK 262 (344)
Q Consensus 184 ~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~ 262 (344)
.++|+|... .|+|||.||+|+|||++.+.....+....|...|+.+.|+..-. +|++|+.
T Consensus 262 DLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~-------------------lLasG~D 322 (440)
T KOG0302|consen 262 DLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREP-------------------LLASGGD 322 (440)
T ss_pred hhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcc-------------------eeeecCC
Confidence 999999654 99999999999999999986666677778888999999987543 5558999
Q ss_pred CCcEEEEeCCC---CeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCC
Q psy15157 263 DGDIKIWDGVS---SKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 263 dg~i~iwd~~~---~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~ 317 (344)
||+++|||+++ +.++..+. .|. .+|++|.|+| +...|+++|.|..|.+||+.-
T Consensus 323 dGt~~iwDLR~~~~~~pVA~fk-~Hk-~pItsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 323 DGTLSIWDLRQFKSGQPVATFK-YHK-APITSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred CceEEEEEhhhccCCCcceeEE-ecc-CCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence 99999999885 45677776 444 5899999999 456788899999999999964
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=159.80 Aligned_cols=257 Identities=18% Similarity=0.229 Sum_probs=180.9
Q ss_pred hHHHHHHHhhhccCcccccccCCCCCCccch-hcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCC
Q psy15157 54 DRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQ-EILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQ 132 (344)
Q Consensus 54 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 132 (344)
.+|.+++.+-.--+-+...-.+.+++.+|.+ ..+++++.|-+...+.. .+..+...+..|.+.|+.|++.. .
T Consensus 48 tKleR~fakPFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnl-----sqR~~~~~f~AH~G~V~Gi~v~~--~ 120 (433)
T KOG0268|consen 48 TKLERVFAKPFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNL-----SQRECIRTFKAHEGLVRGICVTQ--T 120 (433)
T ss_pred HHHHHHhhccchhhccccccccchhhcCcchhhhhhccccCceEEEEeh-----hhhhhhheeecccCceeeEEecc--c
Confidence 4556666554333333334455567777776 34555554443322211 12233456789999999999986 6
Q ss_pred EEEEEeCCCeEEEEEcCCccc-----cccCCC---------------CCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 133 LCATGSVDASIKILDVDRMLA-----KSSMES---------------SEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 133 ~l~sg~~dg~v~iwd~~~~~~-----~~~~~~---------------~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+++++.|.+|+.|.++.... ...... ....++.....++..+.--...|.++.|+|...
T Consensus 121 ~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvET 200 (433)
T KOG0268|consen 121 SFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVET 200 (433)
T ss_pred ceEEecCCcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcc
Confidence 788999999999998643211 000000 012334444556677777778899999999665
Q ss_pred -EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 193 -ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 193 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
+|++|+.|++|.+||++++........ .-.-+.++|+|.+..+++|+.|..+..|
T Consensus 201 sILas~~sDrsIvLyD~R~~~Pl~KVi~---~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~d 277 (433)
T KOG0268|consen 201 SILASCASDRSIVLYDLRQASPLKKVIL---TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMD 277 (433)
T ss_pred hheeeeccCCceEEEecccCCccceeee---eccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEE
Confidence 788888999999999999876554443 2335678999988889999999998876
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
+|.|.-+++||.|.+|+||..+.+..--.+.. ..-..|.++.|+.|.+|+++||+|+.|++|.....+.+
T Consensus 278 VdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYht-kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl 350 (433)
T KOG0268|consen 278 VDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHT-KRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL 350 (433)
T ss_pred eccCCCcchhccccccceEEEeecCCCcchhhhhH-hhhheeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence 89999999999999999999887754333321 11235999999999999999999999999998765544
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=146.88 Aligned_cols=191 Identities=21% Similarity=0.300 Sum_probs=149.6
Q ss_pred cceeEEecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 110 YETAYVTSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
.....|.||.++|+.++|.. .|.+||++++||.|.||.-.++ ..........|...|++++|
T Consensus 47 ~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g----------------~w~k~~e~~~h~~SVNsV~w 110 (299)
T KOG1332|consen 47 KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENG----------------RWTKAYEHAAHSASVNSVAW 110 (299)
T ss_pred eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCC----------------chhhhhhhhhhcccceeecc
Confidence 44567899999999999975 8999999999999999987642 23444566789999999999
Q ss_pred cCC--CCEEEEEeCCCcEEEEEcCCC-ccccceeeeccccceEEEEEecC---C-----------CEEEEEeCCCEEEEE
Q psy15157 188 HPS--APILASGSKDKTVKMFDYSKS-SVRKAHKTIQESTFVRCLSFHPC---G-----------DYMVVGTDHFVLRLY 250 (344)
Q Consensus 188 ~~~--~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~---~-----------~~l~~~~~~~~i~~~ 250 (344)
.|. |-.|++++.||.|.|.+.+.. ..........|...|++++|.|. | +.|++|+.|+.+++|
T Consensus 111 apheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW 190 (299)
T KOG1332|consen 111 APHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIW 190 (299)
T ss_pred cccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeee
Confidence 885 458999999999999998875 22222333457888999999996 4 569999999999999
Q ss_pred c-----------------------------CCCCEEEEEeCCCcEEEEeCCCC--eEEeeecccCCCccEEEEEEccCCC
Q psy15157 251 S-----------------------------SDGRIYCSGSKDGDIKIWDGVSS--KCVATFSKAHDGAEISSLTFTRNGK 299 (344)
Q Consensus 251 ~-----------------------------~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~ 299 (344)
. .-..++++++.||++.||..+.. .-..++.... ...+.++.|+..|+
T Consensus 191 ~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f-~~~~w~vSWS~sGn 269 (299)
T KOG1332|consen 191 KFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEF-PDVVWRVSWSLSGN 269 (299)
T ss_pred ecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccC-CcceEEEEEecccc
Confidence 1 22367999999999999986632 1112222122 23699999999999
Q ss_pred EEEEEeCCCcEEEEEcCC
Q psy15157 300 YLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 300 ~l~s~~~dg~i~vwd~~~ 317 (344)
.|++++.|+.|.+|.-..
T Consensus 270 ~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 270 ILAVSGGDNKVTLWKENV 287 (299)
T ss_pred EEEEecCCcEEEEEEeCC
Confidence 999999999999997543
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-20 Score=148.43 Aligned_cols=198 Identities=21% Similarity=0.344 Sum_probs=154.0
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--CCCE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--SAPI 193 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~ 193 (344)
.+|++-|+|+.|.+.|+.+|||+.|++|+|||.+.. ..++.+....+.|.+.|..+.|.+ -|+.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~--------------s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqv 75 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSD--------------SGTWSCTSSWRAHDGSIWRVVWAHPEFGQV 75 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCC--------------CCceEEeeeEEecCCcEEEEEecCccccce
Confidence 689999999999999999999999999999997531 355677788899999999999955 5789
Q ss_pred EEEEeCCCcEEEEEcCCC-------ccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEE--------------
Q psy15157 194 LASGSKDKTVKMFDYSKS-------SVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~-------------- 250 (344)
+++|+.|+++.||.=... +..+..........|+.+.|.|. |-.+++++.||.+++|
T Consensus 76 vA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq 155 (361)
T KOG2445|consen 76 VATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQ 155 (361)
T ss_pred EEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhh
Confidence 999999999999974211 11112222334567999999994 7889999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy15157 251 -------------------------------------------------------------------------------- 250 (344)
Q Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T Consensus 156 ~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~ 235 (361)
T KOG2445|consen 156 HEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNI 235 (361)
T ss_pred hhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeecccc
Confidence
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCC--------------------eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcE
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSS--------------------KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~--------------------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i 310 (344)
...-..+|+++.|| |+||.++.. +.+..+. .|. +.|..+.|+-.|..|.+.|+||.|
T Consensus 236 Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~-~H~-~~VWrv~wNmtGtiLsStGdDG~V 312 (361)
T KOG2445|consen 236 GRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELD-DHN-GEVWRVRWNMTGTILSSTGDDGCV 312 (361)
T ss_pred CCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeecc-CCC-CceEEEEEeeeeeEEeecCCCcee
Confidence 11235789999999 999998731 1122232 344 579999999999999999999999
Q ss_pred EEEEcCC---CeeEEEeecCCCc
Q psy15157 311 KLWELSS---ARCLIAYTGAGSM 330 (344)
Q Consensus 311 ~vwd~~~---~~~~~~~~~~~~~ 330 (344)
|+|...- -+|+..++..+.+
T Consensus 313 RLWkany~n~~kC~sv~~~e~~~ 335 (361)
T KOG2445|consen 313 RLWKANYNNLWKCTSVLKAEGSV 335 (361)
T ss_pred eehhhhhhhhheeeeEEeccCCC
Confidence 9997643 4577777665543
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-21 Score=166.51 Aligned_cols=206 Identities=22% Similarity=0.355 Sum_probs=174.3
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..++..|.+.|+.++|.+....|++++.||++++|++... ........+++.++++|.++|.|++..+++
T Consensus 287 k~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~----------~~s~~~~~epi~tfraH~gPVl~v~v~~n~ 356 (577)
T KOG0642|consen 287 KFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKA----------KKSAEKDVEPILTFRAHEGPVLCVVVPSNG 356 (577)
T ss_pred eeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhccc----------CCccccceeeeEEEecccCceEEEEecCCc
Confidence 4577899999999999999999999999999999999431 111224457789999999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCc--------cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSS--------VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------- 250 (344)
..+++|+.||+|+.|++.... ..-.-...+|...++.+++|+....|++++.||+++.|
T Consensus 357 ~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~ 436 (577)
T KOG0642|consen 357 EHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEP 436 (577)
T ss_pred eEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCc
Confidence 999999999999999654211 01112235688899999999999999999999999999
Q ss_pred -------------------------------------------------------------cCCCCEEEEEeCCCcEEEE
Q psy15157 251 -------------------------------------------------------------SSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 251 -------------------------------------------------------------~~~~~~l~~~~~dg~i~iw 269 (344)
.|.+.+.+++..|+.|+++
T Consensus 437 ~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~ 516 (577)
T KOG0642|consen 437 KEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFF 516 (577)
T ss_pred cccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecc
Confidence 5677888999999999999
Q ss_pred eCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 270 DGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
|..+++.++... .|.. .++++++.|+|-+|++++.||.+++|.+....++.....|..
T Consensus 517 dn~~~~~l~s~~-a~~~-svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r~ 574 (577)
T KOG0642|consen 517 DNKTGKILHSMV-AHKD-SVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHRK 574 (577)
T ss_pred cccccccchhee-eccc-eecceeecCCCceEEeecCCceeehhhccchheeeccccccc
Confidence 999999998887 4443 599999999999999999999999999999888887777654
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=158.73 Aligned_cols=179 Identities=21% Similarity=0.336 Sum_probs=150.8
Q ss_pred eEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 113 AYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..+.+|+.+|..+.|+|+ +..|++|++|+.+++||+.+ ......+.+|++.|.|.+|+|..
T Consensus 104 R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~------------------a~v~~~l~~htDYVR~g~~~~~~ 165 (487)
T KOG0310|consen 104 RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST------------------AYVQAELSGHTDYVRCGDISPAN 165 (487)
T ss_pred HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCC------------------cEEEEEecCCcceeEeeccccCC
Confidence 346799999999999995 55888999999999999964 22356889999999999999964
Q ss_pred -CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 192 -PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 192 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
.+++|||.||+|++||++... .......|..+|..+.+-|.|..|++++. +.+++|
T Consensus 166 ~hivvtGsYDg~vrl~DtR~~~--~~v~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVT 242 (487)
T KOG0310|consen 166 DHIVVTGSYDGKVRLWDTRSLT--SRVVELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVT 242 (487)
T ss_pred CeEEEecCCCceEEEEEeccCC--ceeEEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEE
Confidence 589999999999999998864 22334568899999999999999988764 568888
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
..++..|++|+-|+.+++||+.+.+.++.+.- . ++|.+++.+|+++.++.|..||.+.+=+.
T Consensus 243 cL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~--~-~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 243 CLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY--P-GPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred EEEeecCCceEeecccccceEEEEccceEEEEeeec--c-cceeeEEecCCCceEEEecccceeeeehh
Confidence 45778999999999999999998898888852 2 47999999999999999999999877644
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=171.13 Aligned_cols=201 Identities=21% Similarity=0.333 Sum_probs=169.4
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC---CCCE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP---SAPI 193 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~ 193 (344)
+-+-.+++++.||+|++||+|..-|+++||++.+ ......+..|..+|.|+.++. ..++
T Consensus 457 d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~------------------l~~~~~~eAHesEilcLeyS~p~~~~kL 518 (1080)
T KOG1408|consen 457 DSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQE------------------LEYTCFMEAHESEILCLEYSFPVLTNKL 518 (1080)
T ss_pred CcccceEEEEECCCcceecccCccCceEEEEehh------------------hhhhhheecccceeEEEeecCchhhhHh
Confidence 4456799999999999999999999999999953 344567789999999999986 3458
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC--CEEEEEeCCCEEEEE---------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG--DYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~~~i~~~--------------------- 250 (344)
|++++.|+.|.|+|+...- ........|...|+++.|...| ..+++++.|..+.+-
T Consensus 519 LASasrdRlIHV~Dv~rny-~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~kt 597 (1080)
T KOG1408|consen 519 LASASRDRLIHVYDVKRNY-DLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKT 597 (1080)
T ss_pred hhhccCCceEEEEeccccc-chhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccc
Confidence 9999999999999986542 2223446688999999998877 778888877766542
Q ss_pred -------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC-ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 251 -------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG-AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 251 -------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
+|..+++++++.|..|+|||+.+++.+..|++.+.. +....+..+|.|.||++.+.|.++.++|+.+|+|+.
T Consensus 598 TlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA 677 (1080)
T KOG1408|consen 598 TLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVA 677 (1080)
T ss_pred eEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhh
Confidence 788999999999999999999999999999855432 457788899999999999999999999999999999
Q ss_pred EeecCCCcCceeee
Q psy15157 323 AYTGAGSMGQQFEL 336 (344)
Q Consensus 323 ~~~~~~~~~~~~~~ 336 (344)
...||+.....+.|
T Consensus 678 ~m~GHsE~VTG~kF 691 (1080)
T KOG1408|consen 678 QMTGHSEAVTGVKF 691 (1080)
T ss_pred hhcCcchheeeeee
Confidence 99999888665544
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-21 Score=172.00 Aligned_cols=182 Identities=18% Similarity=0.334 Sum_probs=143.8
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CC
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 191 (344)
.+..|...|+++.|++ ...+|++||.||+|++||++. .....++.+....|.++.|+| .+
T Consensus 128 ~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~------------------~~S~~t~~~nSESiRDV~fsp~~~ 189 (839)
T KOG0269|consen 128 VFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS------------------KKSKSTFRSNSESIRDVKFSPGYG 189 (839)
T ss_pred HhhhhccceeeeeeccCCccEEEecCCCceEEEEeeec------------------ccccccccccchhhhceeeccCCC
Confidence 5689999999999998 567999999999999999964 233456677888999999999 45
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
..|+++...|.+++||++.... ...+...|.++|.|+.|+|++.+|| ||+.|+.|+|||+
T Consensus 190 ~~F~s~~dsG~lqlWDlRqp~r-~~~k~~AH~GpV~c~nwhPnr~~lA-------------------TGGRDK~vkiWd~ 249 (839)
T KOG0269|consen 190 NKFASIHDSGYLQLWDLRQPDR-CEKKLTAHNGPVLCLNWHPNREWLA-------------------TGGRDKMVKIWDM 249 (839)
T ss_pred ceEEEecCCceEEEeeccCchh-HHHHhhcccCceEEEeecCCCceee-------------------ecCCCccEEEEec
Confidence 6899999999999999998764 3445567999999999999655555 8899999999999
Q ss_pred CCCeEEeeecccCCCccEEEEEEccCCCE-EEEEe--CCCcEEEEEcCCC-eeEEEeecCCCcCcee
Q psy15157 272 VSSKCVATFSKAHDGAEISSLTFTRNGKY-LLSSG--KDSLVKLWELSSA-RCLIAYTGAGSMGQQF 334 (344)
Q Consensus 272 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~s~~--~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~ 334 (344)
.+.+...... -+..++|.++.|-|+..+ |++++ .|-.|+|||++.. -+..+|..|......+
T Consensus 250 t~~~~~~~~t-InTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i 315 (839)
T KOG0269|consen 250 TDSRAKPKHT-INTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGI 315 (839)
T ss_pred cCCCccceeE-EeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccce
Confidence 8765433332 234568999999997766 55554 5788999999765 4567788887665443
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.7e-21 Score=153.36 Aligned_cols=195 Identities=21% Similarity=0.348 Sum_probs=158.2
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
+..+.||++.|+.++.......+.+++.|.+.+||.+++ +.++.++.+|.+.|++++|++.+
T Consensus 141 vre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Es------------------g~CL~~Y~GH~GSVNsikfh~s~ 202 (481)
T KOG0300|consen 141 VRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLES------------------GACLATYTGHTGSVNSIKFHNSG 202 (481)
T ss_pred hhhhcccccceeeehhhcCCcceeecccccceeEEeecc------------------ccceeeecccccceeeEEecccc
Confidence 345689999999999988778999999999999999965 56788999999999999999999
Q ss_pred CEEEEEeCCCcEEEEEc------CCCc--------------------------------cccceeeeccccceEEEEEec
Q psy15157 192 PILASGSKDKTVKMFDY------SKSS--------------------------------VRKAHKTIQESTFVRCLSFHP 233 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~------~~~~--------------------------------~~~~~~~~~~~~~v~~~~~~~ 233 (344)
.++++++.|++-.||.. ..+. ........+|...|.+..|-.
T Consensus 203 ~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~ 282 (481)
T KOG0300|consen 203 LLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA 282 (481)
T ss_pred ceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc
Confidence 99999999999999972 1100 001122345667788888999
Q ss_pred CCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCe-EEeeecccCCCccE
Q psy15157 234 CGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSK-CVATFSKAHDGAEI 289 (344)
Q Consensus 234 ~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v 289 (344)
.|+.+++++.|.+..+| .|..+++++.+.|.+.++||.+..- .+..|. +|.. .|
T Consensus 283 gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQ-GHtd-tV 360 (481)
T KOG0300|consen 283 GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQ-GHTD-TV 360 (481)
T ss_pred CcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeec-cccc-ce
Confidence 99999999999999999 6788999999999999999998543 334444 5654 69
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCC-eeEEEeecC
Q psy15157 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSA-RCLIAYTGA 327 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~ 327 (344)
+++.|..+. .+++|++|.+|++||+++- .++.+++-.
T Consensus 361 TS~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIRtd 398 (481)
T KOG0300|consen 361 TSVVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIRTD 398 (481)
T ss_pred eEEEEecCC-ceeecCCCceEEEeeeccccCcceeeecC
Confidence 999999654 5899999999999999874 345555543
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=150.62 Aligned_cols=199 Identities=23% Similarity=0.406 Sum_probs=145.3
Q ss_pred EecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCC
Q psy15157 115 VTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~ 192 (344)
...|.+.|+++...+ .|+|+++|+.||.|.+||+.+...... . .........-....-.+|.-.|.++.|.| |..
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~--s-~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtG 115 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEA--S-GLIAKHKCIVAKQHENGHKYAISSAIWYPIDTG 115 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhh--c-cceeheeeeccccCCccceeeeeeeEEeeecCc
Confidence 356999999999988 789999999999999999975310000 0 00000000001123357888999999999 445
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC---CCEEEEEeCCCEEEE--------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC---GDYMVVGTDHFVLRL-------------------- 249 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~-------------------- 249 (344)
+|.+++.|.++++||.++-+....++ -...|++-+++|- ..++++|+.+-.|++
T Consensus 116 mFtssSFDhtlKVWDtnTlQ~a~~F~---me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vl 192 (397)
T KOG4283|consen 116 MFTSSSFDHTLKVWDTNTLQEAVDFK---MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVL 192 (397)
T ss_pred eeecccccceEEEeecccceeeEEee---cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceE
Confidence 89999999999999999876544444 3456788888883 447778888888877
Q ss_pred ---EcCCCC-EEEEEeCCCcEEEEeCCCC-eEEeeec-------------ccCCCccEEEEEEccCCCEEEEEeCCCcEE
Q psy15157 250 ---YSSDGR-IYCSGSKDGDIKIWDGVSS-KCVATFS-------------KAHDGAEISSLTFTRNGKYLLSSGKDSLVK 311 (344)
Q Consensus 250 ---~~~~~~-~l~~~~~dg~i~iwd~~~~-~~~~~~~-------------~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~ 311 (344)
|+|... .|++|+.||.|++||++.. .+...+. ..|. +.+++++|..++.++++++.|..++
T Consensus 193 aV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~-gkvngla~tSd~~~l~~~gtd~r~r 271 (397)
T KOG4283|consen 193 AVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHY-GKVNGLAWTSDARYLASCGTDDRIR 271 (397)
T ss_pred EEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccccccccc-ceeeeeeecccchhhhhccCccceE
Confidence 456554 4789999999999998754 3332222 2233 4699999999999999999999999
Q ss_pred EEEcCCCee
Q psy15157 312 LWELSSARC 320 (344)
Q Consensus 312 vwd~~~~~~ 320 (344)
+|+..+|+.
T Consensus 272 ~wn~~~G~n 280 (397)
T KOG4283|consen 272 VWNMESGRN 280 (397)
T ss_pred EeecccCcc
Confidence 999998864
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-19 Score=163.17 Aligned_cols=200 Identities=19% Similarity=0.287 Sum_probs=161.9
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcc-ccccCC-CCCC---------------------cCCCCCCceE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRML-AKSSME-SSEP---------------------QNDQQGHPVI 172 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~-~~~~~~-~~~~---------------------~~~~~~~~~~ 172 (344)
.+|+..-+.++|.++|+++.+++.||.|++|+..... ...... ..+. .........-
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~ 89 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEED 89 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCcc
Confidence 3799999999999999999999999999999986541 111111 0000 0001111112
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-- 250 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-- 250 (344)
..+...+-++.+++++.+|++++.||.|-.|++-++.+..... ...+|..+|.++.|+|.+.+|++.+.||.+++|
T Consensus 90 ~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~--~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~ 167 (933)
T KOG1274|consen 90 TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEK--VLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDL 167 (933)
T ss_pred ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchhe--eecccCCceeeeeEcCCCCEEEEEecCceEEEEEc
Confidence 2333455689999999999999999999999999998876543 446789999999999999999999999999998
Q ss_pred -----------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 251 -----------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 251 -----------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+|+|..++..+.|+.|++|+...++....+...+....++.+.|+|+|+||
T Consensus 168 ~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~Yi 247 (933)
T KOG1274|consen 168 QDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYI 247 (933)
T ss_pred ccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEE
Confidence 789888999999999999999999988888765554559999999999999
Q ss_pred EEEeCCCcEEEEEcCC
Q psy15157 302 LSSGKDSLVKLWELSS 317 (344)
Q Consensus 302 ~s~~~dg~i~vwd~~~ 317 (344)
++++.||.|.|||+.+
T Consensus 248 AAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 248 AASTLDGQILVWNVDT 263 (933)
T ss_pred eeeccCCcEEEEeccc
Confidence 9999999999999985
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=164.14 Aligned_cols=182 Identities=24% Similarity=0.394 Sum_probs=151.6
Q ss_pred EEec-CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTS-HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~-h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+.+ |...|-+++|+ +..+.+|+.|+.|..+|++.. .....++.+|...|..++|++++.
T Consensus 254 ~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~-----------------~~~~~~~~~H~qeVCgLkws~d~~ 314 (484)
T KOG0305|consen 254 TLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRIS-----------------QHVVSTLQGHRQEVCGLKWSPDGN 314 (484)
T ss_pred cccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecc-----------------hhhhhhhhcccceeeeeEECCCCC
Confidence 3456 99999999998 778999999999999999742 222234889999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEE--eCCCEEEEE-------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVG--TDHFVLRLY------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~--~~~~~i~~~------------------- 250 (344)
+|++|+.|+.+.|||..... ..+....|...|.+++|+| ....||+| +.|+.|++|
T Consensus 315 ~lASGgnDN~~~Iwd~~~~~--p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcs 392 (484)
T KOG0305|consen 315 QLASGGNDNVVFIWDGLSPE--PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCS 392 (484)
T ss_pred eeccCCCccceEeccCCCcc--ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceee
Confidence 99999999999999996553 4456678999999999999 56777775 579999998
Q ss_pred ---cCCCCEEEE--EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 ---SSDGRIYCS--GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 ---~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
++..+-+++ |..+..|.||+..+.+.+..+. +|. ..|..++++|||..+++|+.|.++++|++-..
T Consensus 393 L~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~-gH~-~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 393 LIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELL-GHT-SRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEcCCCCEEEEecCCCCCcEEEEeccccceeeeec-CCc-ceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 445544554 3455689999999988888887 554 46999999999999999999999999999775
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=154.03 Aligned_cols=201 Identities=22% Similarity=0.313 Sum_probs=155.2
Q ss_pred ecCCCceEEEEECCCC--CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-
Q psy15157 116 TSHKSPCRAGAFSIDG--QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP- 192 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~--~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 192 (344)
.+|.+.|+.+..++-+ .+.|+-+..|.|+||++........... ........+++.++.+|.+.=..++|||-..
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~--~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g 225 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPG--LEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG 225 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCcc--ccccccccCceEEecccCccceeeeccccccc
Confidence 4788999999888754 4788888999999999975433222111 1112245678899999999999999999443
Q ss_pred EEEEEeCCCcEEEEEcCCCccc-cceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVR-KAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
.|+||..-+.|++|...++... ....+.+|...|-.++|+|.. ...|++||-||+|+|||+
T Consensus 226 ~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE------------------~~vfaScS~DgsIrIWDi 287 (440)
T KOG0302|consen 226 RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTE------------------DGVFASCSCDGSIRIWDI 287 (440)
T ss_pred ccccCccccceEeeeeccCceeecCccccccccchhhhccCCcc------------------CceEEeeecCceEEEEEe
Confidence 5888888899999999887642 223345588899999999953 445669999999999999
Q ss_pred CCCeE-EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC---CeeEEEeecCCCcCceeeee
Q psy15157 272 VSSKC-VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS---ARCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 272 ~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~ 337 (344)
+++.. ...+...|. +.|+.|.|+.+-.+|++|++||+++|||+|. ++++..|+.|.++.+.+...
T Consensus 288 Rs~~~~~~~~~kAh~-sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~ 356 (440)
T KOG0302|consen 288 RSGPKKAAVSTKAHN-SDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWH 356 (440)
T ss_pred cCCCccceeEeeccC-CceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEec
Confidence 99832 222234565 4799999999888999999999999999986 67899999999887776654
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-21 Score=171.42 Aligned_cols=163 Identities=25% Similarity=0.500 Sum_probs=133.1
Q ss_pred ceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CEEEEEe
Q psy15157 121 PCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PILASGS 198 (344)
Q Consensus 121 ~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~ 198 (344)
.+..+.|+. +.+++||++..|.|.+||+... ...+.+..+..|...++++.|++.. .+|+|||
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~---------------~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGS 153 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKS---------------IRNKLLTVFNEHERSANKLDFHSTEPNILISGS 153 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCcc---------------ccchhhhHhhhhccceeeeeeccCCccEEEecC
Confidence 455667765 5779999999999999999741 2244566788999999999999965 4899999
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EE
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK-CV 277 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~ 277 (344)
.||+|++||++..+....+. .....|+.+.|+|. .+.+|+++...|.+++||++... +.
T Consensus 154 QDg~vK~~DlR~~~S~~t~~--~nSESiRDV~fsp~------------------~~~~F~s~~dsG~lqlWDlRqp~r~~ 213 (839)
T KOG0269|consen 154 QDGTVKCWDLRSKKSKSTFR--SNSESIRDVKFSPG------------------YGNKFASIHDSGYLQLWDLRQPDRCE 213 (839)
T ss_pred CCceEEEEeeeccccccccc--ccchhhhceeeccC------------------CCceEEEecCCceEEEeeccCchhHH
Confidence 99999999999876555443 46677999999994 46677789999999999999764 44
Q ss_pred eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
..+. +|. ++|.++.|+|++.+|+|||.|++|+|||+.+++.
T Consensus 214 ~k~~-AH~-GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~ 254 (839)
T KOG0269|consen 214 KKLT-AHN-GPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA 254 (839)
T ss_pred HHhh-ccc-CceEEEeecCCCceeeecCCCccEEEEeccCCCc
Confidence 4444 666 5899999999999999999999999999986543
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-19 Score=141.63 Aligned_cols=171 Identities=20% Similarity=0.319 Sum_probs=130.8
Q ss_pred EecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 115 VTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
..+|.+.|-.++|+| +..+|++++.|.+|++||.+...+. .......+. .-+.|+|+|.+
T Consensus 60 ~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~------------------~~i~~~~en-i~i~wsp~g~~ 120 (313)
T KOG1407|consen 60 YRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCT------------------ARIETKGEN-INITWSPDGEY 120 (313)
T ss_pred ccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEE------------------EEeeccCcc-eEEEEcCCCCE
Confidence 579999999999997 6679999999999999999754332 222222222 23456666666
Q ss_pred EEEEeCCCcEEEEEcCCCc---------------------------------------cccceeeeccccceEEEEEecC
Q psy15157 194 LASGSKDKTVKMFDYSKSS---------------------------------------VRKAHKTIQESTFVRCLSFHPC 234 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~---------------------------------------~~~~~~~~~~~~~v~~~~~~~~ 234 (344)
++.++.|..|.+.|.++.+ +.....+..|.....|+.|+|+
T Consensus 121 ~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~ 200 (313)
T KOG1407|consen 121 IAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPD 200 (313)
T ss_pred EEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCC
Confidence 6666666666666644322 1222234457778899999999
Q ss_pred CCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEE
Q psy15157 235 GDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291 (344)
Q Consensus 235 ~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 291 (344)
|+|+++|+.|..+.+| +.+|++||+||.|..|-|=++.+|..+..+. +. ++...
T Consensus 201 GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~--~~-~~t~t 277 (313)
T KOG1407|consen 201 GRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP--CE-GPTFT 277 (313)
T ss_pred CceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee--cc-CCcee
Confidence 9999999999999999 6799999999999999999999999998885 33 46899
Q ss_pred EEEccCCCEEEEEeCC
Q psy15157 292 LTFTRNGKYLLSSGKD 307 (344)
Q Consensus 292 i~~~~~~~~l~s~~~d 307 (344)
++|+|...+|+-+++|
T Consensus 278 VAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 278 VAWHPKRPLLAYACDD 293 (313)
T ss_pred EEecCCCceeeEEecC
Confidence 9999999999877655
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-20 Score=149.70 Aligned_cols=203 Identities=20% Similarity=0.268 Sum_probs=160.3
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEc------CCccccccCCCCC----------------CcCCCCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDV------DRMLAKSSMESSE----------------PQNDQQGH 169 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~------~~~~~~~~~~~~~----------------~~~~~~~~ 169 (344)
...+.||.+.|+++.|++.+.++++++.|++.+||.. ............+ ......-.
T Consensus 183 L~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiR 262 (481)
T KOG0300|consen 183 LATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIR 262 (481)
T ss_pred eeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceee
Confidence 4567899999999999999999999999999999983 2111111000000 01111123
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
.++..+.+|.+.|.+..|-..++.+++++.|.+..+||++++.....+ .+|....+.++-+|..+++++.+.|.+.++
T Consensus 263 vPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~L--tGHd~ELtHcstHptQrLVvTsSrDtTFRL 340 (481)
T KOG0300|consen 263 VPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNIL--TGHDSELTHCSTHPTQRLVVTSSRDTTFRL 340 (481)
T ss_pred eeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccc--cCcchhccccccCCcceEEEEeccCceeEe
Confidence 456788999999999999999999999999999999999999765544 468888999999999999999999999999
Q ss_pred Ec-----------------------CCCCEEEEEeCCCcEEEEeCCCCe-EEeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 250 YS-----------------------SDGRIYCSGSKDGDIKIWDGVSSK-CVATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 250 ~~-----------------------~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
|+ ..+..+++|+.|.+|++||+++.+ ++.++.. .++++.++.+..+..|+.--
T Consensus 341 WDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRt---dS~~NRvavs~g~~iIAiPh 417 (481)
T KOG0300|consen 341 WDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRT---DSPANRVAVSKGHPIIAIPH 417 (481)
T ss_pred ccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeeec---CCccceeEeecCCceEEecc
Confidence 92 245668899999999999999865 4555542 24799999998888888888
Q ss_pred CCCcEEEEEcCCCe
Q psy15157 306 KDSLVKLWELSSAR 319 (344)
Q Consensus 306 ~dg~i~vwd~~~~~ 319 (344)
++..|++||+...+
T Consensus 418 DNRqvRlfDlnG~R 431 (481)
T KOG0300|consen 418 DNRQVRLFDLNGNR 431 (481)
T ss_pred CCceEEEEecCCCc
Confidence 89999999995443
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-19 Score=156.43 Aligned_cols=202 Identities=16% Similarity=0.238 Sum_probs=161.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-cCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH-IEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~ 192 (344)
.+.--..+|.+++|+...+.||.+-.||.|.||++. ..+-....+.++ ...|.+++|++ +.
T Consensus 20 f~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~-----------------~~w~~~~vi~g~~drsIE~L~W~e-~~ 81 (691)
T KOG2048|consen 20 FVDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLS-----------------NNWFLEPVIHGPEDRSIESLAWAE-GG 81 (691)
T ss_pred EEeeeccceEEEEEeccCCceeeeccCCcEEEEccC-----------------CCceeeEEEecCCCCceeeEEEcc-CC
Confidence 344456799999999999999999999999999996 334445556655 56899999994 45
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE-----------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL----------------------- 249 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~----------------------- 249 (344)
.|+|.+.+|+|.-||+.+.+.+. ......+.|++++.+|.+..+++|++||.+..
T Consensus 82 RLFS~g~sg~i~EwDl~~lk~~~--~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLs 159 (691)
T KOG2048|consen 82 RLFSSGLSGSITEWDLHTLKQKY--NIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLS 159 (691)
T ss_pred eEEeecCCceEEEEecccCceeE--EecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEE
Confidence 67888889999999999886543 44456788999999999999999999997665
Q ss_pred --EcCCCCEEEEEeCCCcEEEEeCCCCeEEeeec----c-cC-CCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 250 --YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS----K-AH-DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 250 --~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~-~~-~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
|++++..+++|+.||.|++||..++..+.... . .. ...-|+++.|-.++ .|++|..-|+|.+||-..|.++
T Consensus 160 lsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLi 238 (691)
T KOG2048|consen 160 LSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLI 238 (691)
T ss_pred EEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchh
Confidence 37899999999999999999999988766221 1 11 22347888887554 6899999999999999999999
Q ss_pred EEeecCCCcCceeee
Q psy15157 322 IAYTGAGSMGQQFEL 336 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~ 336 (344)
..+.-|.+....+..
T Consensus 239 qS~~~h~adVl~Lav 253 (691)
T KOG2048|consen 239 QSHSCHDADVLALAV 253 (691)
T ss_pred hhhhhhhcceeEEEE
Confidence 998887665544443
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.8e-20 Score=161.67 Aligned_cols=174 Identities=22% Similarity=0.350 Sum_probs=145.7
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..+|.||+..|.|+....++. +++||.|.++++|... ++...+.+|...|++++.-|++
T Consensus 94 ~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~--------------------~l~~~l~gH~asVWAv~~l~e~ 152 (745)
T KOG0301|consen 94 LYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG--------------------ELVYSLQGHTASVWAVASLPEN 152 (745)
T ss_pred hhhhhccccceeeeecCCcCc-eEecccccceEEecch--------------------hhhcccCCcchheeeeeecCCC
Confidence 456899999999999888887 9999999999999874 3455689999999999999988
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.++||+.|.+|++|.- ++..+.+ .+|...|+.+++-++ ..+++|+.||.|++|
T Consensus 153 -~~vTgsaDKtIklWk~--~~~l~tf--~gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis 226 (745)
T KOG0301|consen 153 -TYVTGSADKTIKLWKG--GTLLKTF--SGHTDCVRGLAVLDD-SHFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSIS 226 (745)
T ss_pred -cEEeccCcceeeeccC--Cchhhhh--ccchhheeeeEEecC-CCeEeecCCceEEEEeccCceeeeeeccceEEEEEE
Confidence 8999999999999985 4445555 458999999999875 457789999999999
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..++..+++++.|++++||+.. ++.+.+.... -.|+++++-++|. +++|+.||.||||..+.
T Consensus 227 ~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPt--tsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 227 MALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPT--TSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred ecCCCCeEEEecCCceEEEeecC--ceEEEEecCc--cceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence 3456778899999999999976 7777775332 3599999998888 67788899999998763
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-19 Score=151.37 Aligned_cols=206 Identities=16% Similarity=0.295 Sum_probs=163.5
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASG 197 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 197 (344)
.+.|+++.|+|...++++|+.||+++||.++. .....++.+.-...+|.+.+|.|+|. .++++
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDG----------------k~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s 276 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDG----------------KVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTS 276 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecC----------------ccChhheeeeeccCccceeeecCCCceEEEec
Confidence 46899999999999999999999999999973 33445677777788999999999999 89999
Q ss_pred eCCCcEEEEEcCCCccccceeeecc-ccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCCC
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQE-STFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSDG 254 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~~ 254 (344)
+....++.||+.+.+..+.....+. ...+..+..++++++|+..+..|.|.+. +.++
T Consensus 277 ~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSds 356 (514)
T KOG2055|consen 277 GRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDS 356 (514)
T ss_pred ccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCC
Confidence 9999999999998876544333332 2356778899999999999999999873 8899
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC------CeeEEEeecCC
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS------ARCLIAYTGAG 328 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~~~~~ 328 (344)
+.|++++.+|.|.+||++...+++.+..... -.-++++.+++|.||++|++.|.|-|||..+ .+++.++..-.
T Consensus 357 k~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~-v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLt 435 (514)
T KOG2055|consen 357 KELLASGGTGEVYVWNLRQNSCLHRFVDDGS-VHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLT 435 (514)
T ss_pred cEEEEEcCCceEEEEecCCcceEEEEeecCc-cceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhh
Confidence 9999999999999999999999998864322 2347788889999999999999999999654 23444433222
Q ss_pred CcCceeeeeeeccCC
Q psy15157 329 SMGQQFELTLTVDAD 343 (344)
Q Consensus 329 ~~~~~~~~~~~~~~~ 343 (344)
.....+.|++|.+
T Consensus 436 --t~Itsl~Fn~d~q 448 (514)
T KOG2055|consen 436 --TAITSLQFNHDAQ 448 (514)
T ss_pred --eeeeeeeeCcchh
Confidence 2334455555544
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.4e-19 Score=157.36 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=94.6
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
.+..+.++...|+++.=+|-=+.+|.|..+|+|.|+++.. .+.+.+++...++|+.++|..|
T Consensus 194 ~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~------------------dkil~sFk~d~g~VtslSFrtD 255 (910)
T KOG1539|consen 194 VVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKF------------------DKILMSFKQDWGRVTSLSFRTD 255 (910)
T ss_pred EEEEecccccceeEeccCCcceEEEEeccCceEEEEEccc------------------CcEEEEEEccccceeEEEeccC
Confidence 4556788999999999999889999999999999999953 4567777755799999999999
Q ss_pred CC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 191 AP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 191 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
|+ ++++|+..|.+.+||++..+...... ..|.+.+....|.|....+++++.|+.+++|
T Consensus 256 G~p~las~~~~G~m~~wDLe~kkl~~v~~-nah~~sv~~~~fl~~epVl~ta~~DnSlk~~ 315 (910)
T KOG1539|consen 256 GNPLLASGRSNGDMAFWDLEKKKLINVTR-NAHYGSVTGATFLPGEPVLVTAGADNSLKVW 315 (910)
T ss_pred CCeeEEeccCCceEEEEEcCCCeeeeeee-ccccCCcccceecCCCceEeeccCCCceeEE
Confidence 98 77888888999999998876544333 2345556666666666666666666666665
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-19 Score=157.25 Aligned_cols=189 Identities=21% Similarity=0.328 Sum_probs=157.0
Q ss_pred ceeEEecCCCceEE-EEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRA-GAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~-~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
+...+.+|.+-|.+ +++-+ ++-.+++|+.|++|.+|... ...+..++.+|.+.|++++..
T Consensus 49 ~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~------------------~~~P~~~LkgH~snVC~ls~~ 110 (745)
T KOG0301|consen 49 ETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLS------------------QAEPLYTLKGHKSNVCSLSIG 110 (745)
T ss_pred cceecccCcceeeccceeccccCcceEeecccceEEEEecC------------------CCCchhhhhccccceeeeecC
Confidence 34556788888877 88875 55579999999999999984 356788999999999999988
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc-----------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS----------------- 251 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~----------------- 251 (344)
.++. ++|||.|.++++|-...- . ....+|...|+++..-|.+ .+++|+.|..|++|.
T Consensus 111 ~~~~-~iSgSWD~TakvW~~~~l--~--~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~~~~l~tf~gHtD~VRg 184 (745)
T KOG0301|consen 111 EDGT-LISGSWDSTAKVWRIGEL--V--YSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKGGTLLKTFSGHTDCVRG 184 (745)
T ss_pred CcCc-eEecccccceEEecchhh--h--cccCCcchheeeeeecCCC-cEEeccCcceeeeccCCchhhhhccchhheee
Confidence 8876 999999999999987543 2 3357899999999999988 889999999999992
Q ss_pred ---CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 252 ---SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 252 ---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
-++..|++++.||.|++|++ +++++.... +|. +.|.++....++..++++|+|+++++|+.. ++...+..++
T Consensus 185 L~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~-ght-n~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPt 259 (745)
T KOG0301|consen 185 LAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMH-GHT-NFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPT 259 (745)
T ss_pred eEEecCCCeEeecCCceEEEEec-cCceeeeee-ccc-eEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCc
Confidence 34556779999999999998 788887776 444 479999988888999999999999999985 7777766554
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=151.00 Aligned_cols=206 Identities=17% Similarity=0.244 Sum_probs=156.2
Q ss_pred eEEecCCCceEEEEECCCC--CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDG--QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~--~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....-|.+.|++++|+|.. +++|+|+..|.|-+||+.+. .....-+..+..|.++|.++.|+|.
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~--------------~~d~d~v~~f~~hs~~Vs~l~F~P~ 245 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQ--------------EKDKDGVYLFTPHSGPVSGLKFSPA 245 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCC--------------CCccCceEEeccCCccccceEecCC
Confidence 3456789999999999954 58999999999999999521 1223446678899999999999996
Q ss_pred CC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 191 AP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 191 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
.. .+++.|.||+|++-|++.......+........+..+.|+.+...++.+..-|...+|
T Consensus 246 n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI 325 (498)
T KOG4328|consen 246 NTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKI 325 (498)
T ss_pred ChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhccc
Confidence 54 8999999999999999987654444443455667888888888888888877777776
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEee--ecc-cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc----CC
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVAT--FSK-AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL----SS 317 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~-~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~----~~ 317 (344)
.....+++|++.|++.+|||++....... +.. .|. ..|++..|+|.+-.|++.+.|..|+|||. ..
T Consensus 326 ~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~Hr-rsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~ 404 (498)
T KOG4328|consen 326 TSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHR-RSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAK 404 (498)
T ss_pred ceeecCCCCchheeecccCcceeeeehhhhcCCCCcceeccccc-ceeeeeEEcCCCCceEeeccCCceEEeeccccccc
Confidence 22456789999999999999987533322 221 343 46999999998888999999999999998 34
Q ss_pred CeeEEEeecCCCcCce
Q psy15157 318 ARCLIAYTGAGSMGQQ 333 (344)
Q Consensus 318 ~~~~~~~~~~~~~~~~ 333 (344)
..++..+....-.+++
T Consensus 405 ~~p~~~I~Hn~~t~Rw 420 (498)
T KOG4328|consen 405 DEPLGTIPHNNRTGRW 420 (498)
T ss_pred CCccceeeccCccccc
Confidence 4555555554444443
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=152.78 Aligned_cols=207 Identities=16% Similarity=0.260 Sum_probs=155.5
Q ss_pred EEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.|.||.+.|.|++=+|.. ..+++|+.||.|+|||+.. ..+..++..|.+.|..|++.. .
T Consensus 61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsq------------------R~~~~~f~AH~G~V~Gi~v~~--~ 120 (433)
T KOG0268|consen 61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQ------------------RECIRTFKAHEGLVRGICVTQ--T 120 (433)
T ss_pred hccccccccchhhcCcchhhhhhccccCceEEEEehhh------------------hhhhheeecccCceeeEEecc--c
Confidence 358999999999999976 7899999999999999953 456778999999999999987 6
Q ss_pred EEEEEeCCCcEEEEEcCCCcc-----------------ccce-------------------eeeccccceEEEEEecCC-
Q psy15157 193 ILASGSKDKTVKMFDYSKSSV-----------------RKAH-------------------KTIQESTFVRCLSFHPCG- 235 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~-----------------~~~~-------------------~~~~~~~~v~~~~~~~~~- 235 (344)
.+++++.|.+|+.|-+...-. ...+ ...-....|.++.|+|..
T Consensus 121 ~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvET 200 (433)
T KOG0268|consen 121 SFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVET 200 (433)
T ss_pred ceEEecCCcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcc
Confidence 788999999999997432100 0000 000123456788888865
Q ss_pred CEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEE
Q psy15157 236 DYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLT 293 (344)
Q Consensus 236 ~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~ 293 (344)
..|++|..|+.|.+| +|.+-.|++|+.|..++.||++...........|. +.|.+++
T Consensus 201 sILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhv-sAV~dVd 279 (433)
T KOG0268|consen 201 SILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHV-SAVMDVD 279 (433)
T ss_pred hheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccc-eeEEEec
Confidence 456667789988885 78888899999999999999998654444433554 4699999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 294 FTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 294 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
|+|.|+-+++||.|.+|+||.++.+..--.| .-.-+...+++.++.|.
T Consensus 280 fsptG~EfvsgsyDksIRIf~~~~~~SRdiY-htkRMq~V~~Vk~S~Ds 327 (433)
T KOG0268|consen 280 FSPTGQEFVSGSYDKSIRIFPVNHGHSRDIY-HTKRMQHVFCVKYSMDS 327 (433)
T ss_pred cCCCcchhccccccceEEEeecCCCcchhhh-hHhhhheeeEEEEeccc
Confidence 9999999999999999999999887653333 12234445555555554
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=150.69 Aligned_cols=203 Identities=17% Similarity=0.299 Sum_probs=154.3
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...|..|...|+++.|+|+|++||+|+.+|.|.+|........ ....+...+...+.....+.+|...|..++|+|++
T Consensus 58 ~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~--~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~ 135 (434)
T KOG1009|consen 58 LSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIF--DADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDS 135 (434)
T ss_pred eecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCc--cccchhhhCccceEEEEEecccccchhhhhccCCC
Confidence 4567899999999999999999999999999999987641111 01112223345577788899999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.++++++.|.++++||+..+...... ..|...+..++|.|.++++++-+.|...+.+
T Consensus 136 ~~l~s~s~dns~~l~Dv~~G~l~~~~--~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~ 213 (434)
T KOG1009|consen 136 NFLVSGSVDNSVRLWDVHAGQLLAIL--DDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAF 213 (434)
T ss_pred ceeeeeeccceEEEEEeccceeEeec--cccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeeccc
Confidence 99999999999999999998765433 4566778888888887777776655533322
Q ss_pred --------------------------------------------------------------------------------
Q psy15157 251 -------------------------------------------------------------------------------- 250 (344)
Q Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T Consensus 214 ~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pV 293 (434)
T KOG1009|consen 214 NEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPV 293 (434)
T ss_pred CCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeee
Confidence
Q ss_pred ---------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 251 ---------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 251 ---------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
-|-+..++.++.+ .++|||..+.+++.....-|- ..|+.++|++||.+|+..|.||...+--+
T Consensus 294 y~elrp~~~~~~~~~lpyrlvfaiAt~~-svyvydtq~~~P~~~v~nihy-~~iTDiaws~dg~~l~vSS~DGyCS~vtf 371 (434)
T KOG1009|consen 294 YYELRPLSSEKFLFVLPYRLVFAIATKN-SVYVYDTQTLEPLAVVDNIHY-SAITDIAWSDDGSVLLVSSTDGFCSLVTF 371 (434)
T ss_pred EEEeccccccccccccccceEEEEeecc-eEEEeccccccceEEEeeeee-eeecceeecCCCcEEEEeccCCceEEEEE
Confidence 1223344555444 688999888887777765554 57999999999999999999999888766
Q ss_pred CCCee
Q psy15157 316 SSARC 320 (344)
Q Consensus 316 ~~~~~ 320 (344)
...++
T Consensus 372 e~~el 376 (434)
T KOG1009|consen 372 EPWEL 376 (434)
T ss_pred cchhc
Confidence 65443
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.4e-21 Score=169.35 Aligned_cols=181 Identities=24% Similarity=0.486 Sum_probs=154.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+..|...|.|+..-..++.+++|+.|..+-+|.+.. ...+..+.+|...|.++.|++...+
T Consensus 23 ~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~k------------------p~~i~S~~~hespIeSl~f~~~E~L 84 (825)
T KOG0267|consen 23 EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGK------------------PNAITSLTGHESPIESLTFDTSERL 84 (825)
T ss_pred hhhhhhhhhceeeeeccceeeccCCCceeeccccccC------------------CchhheeeccCCcceeeecCcchhh
Confidence 3467999999999877899999999999999999853 2223458899999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~ 273 (344)
|++|+.+|+|++||+...+.... ..+|...+.++.|+|-+.|. +.|+.|+.+++||.+.
T Consensus 85 laagsasgtiK~wDleeAk~vrt--Ltgh~~~~~sv~f~P~~~~~-------------------a~gStdtd~~iwD~Rk 143 (825)
T KOG0267|consen 85 LAAGSASGTIKVWDLEEAKIVRT--LTGHLLNITSVDFHPYGEFF-------------------ASGSTDTDLKIWDIRK 143 (825)
T ss_pred hcccccCCceeeeehhhhhhhhh--hhccccCcceeeeccceEEe-------------------ccccccccceehhhhc
Confidence 99999999999999998765543 35677788999999965554 4789999999999998
Q ss_pred CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceee
Q psy15157 274 SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 274 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 335 (344)
..|.+.+.. |.. .+..+.|+|+|+++++|++|..++|||+..|+.+..|++|.+.+....
T Consensus 144 ~Gc~~~~~s-~~~-vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle 203 (825)
T KOG0267|consen 144 KGCSHTYKS-HTR-VVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLE 203 (825)
T ss_pred cCceeeecC-Ccc-eeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccc
Confidence 889988875 553 589999999999999999999999999999999999998876655444
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=150.23 Aligned_cols=169 Identities=22% Similarity=0.388 Sum_probs=137.3
Q ss_pred EecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-C
Q psy15157 115 VTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-P 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 192 (344)
+.||+++|..++|+| +.+.+|+||.|.+|.||.+....... .-..++..+.+|...|..++|||.. +
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~-----------~ltepvv~L~gH~rrVg~V~wHPtA~N 145 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTR-----------DLTEPVVELYGHQRRVGLVQWHPTAPN 145 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCccccc-----------CcccceEEEeecceeEEEEeecccchh
Confidence 579999999999999 66789999999999999996422111 2235688899999999999999965 5
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~ 272 (344)
.|+|++.|.+|.+||+.++..... ..|...|+++.|+.+|.+ +++.+.|..|||||.+
T Consensus 146 VLlsag~Dn~v~iWnv~tgeali~---l~hpd~i~S~sfn~dGs~-------------------l~TtckDKkvRv~dpr 203 (472)
T KOG0303|consen 146 VLLSAGSDNTVSIWNVGTGEALIT---LDHPDMVYSMSFNRDGSL-------------------LCTTCKDKKVRVIDPR 203 (472)
T ss_pred hHhhccCCceEEEEeccCCceeee---cCCCCeEEEEEeccCCce-------------------eeeecccceeEEEcCC
Confidence 899999999999999999865433 348899999999985554 4488999999999999
Q ss_pred CCeEEeeecccCCCccEEEEEEccCCCEEEEE---eCCCcEEEEEcCC
Q psy15157 273 SSKCVATFSKAHDGAEISSLTFTRNGKYLLSS---GKDSLVKLWELSS 317 (344)
Q Consensus 273 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~---~~dg~i~vwd~~~ 317 (344)
+++.+..-. .|.+..-..+.|-.+|.++-|| -.+..+-+||-..
T Consensus 204 ~~~~v~e~~-~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~n 250 (472)
T KOG0303|consen 204 RGTVVSEGV-AHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNN 250 (472)
T ss_pred CCcEeeecc-cccCCCcceeEEeccCceeeeccccccccceeccCccc
Confidence 999988874 6777777788898899954444 2567799998755
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=152.43 Aligned_cols=189 Identities=19% Similarity=0.363 Sum_probs=145.3
Q ss_pred eeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+.+|.+.|+.+.|.|+ .+++++||.|.+|++|++.++.+.. ...-+.+|.+.|.++.|+++
T Consensus 128 ~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~---------------VfGG~egHrdeVLSvD~~~~ 192 (385)
T KOG1034|consen 128 SKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVA---------------VFGGVEGHRDEVLSVDFSLD 192 (385)
T ss_pred ccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEE---------------EecccccccCcEEEEEEcCC
Confidence 3457899999999999995 4799999999999999997654432 22345689999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccce--------------------------eeeccccceEEEEEecCCCEEEEEeCC
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAH--------------------------KTIQESTFVRCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~~ 244 (344)
+..|+||+.|.++++|++...+....+ ...-|...|.|+.| -|+++++-+.+
T Consensus 193 gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw--~gd~ilSksce 270 (385)
T KOG1034|consen 193 GDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRW--FGDFILSKSCE 270 (385)
T ss_pred CCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHH--HhhheeecccC
Confidence 999999999999999999843221111 01113344445554 35778887778
Q ss_pred CEEEEE---------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEE--eeeccc
Q psy15157 245 FVLRLY---------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCV--ATFSKA 283 (344)
Q Consensus 245 ~~i~~~---------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~ 283 (344)
+.|..| ++-++.||.|...|.|.+||++..++. .++...
T Consensus 271 naI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s 350 (385)
T KOG1034|consen 271 NAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHS 350 (385)
T ss_pred ceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEec
Confidence 888887 556678899999999999999987653 223223
Q ss_pred CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 284 ~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..+..|...+|+.||..|+..++|++|.-||-.+
T Consensus 351 ~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv~ 384 (385)
T KOG1034|consen 351 KSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRVS 384 (385)
T ss_pred cccceeeeeeecccCcEEEEEeCCCcEEEEEeec
Confidence 3446799999999999999999999999998643
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=151.81 Aligned_cols=188 Identities=20% Similarity=0.335 Sum_probs=149.6
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC--
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-- 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-- 191 (344)
.+.+|-..|+|+.|+-||.+|+|||.||.|.+|.+....... +.....+...+..|+-+|+++...+.+
T Consensus 118 v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~---------~~~~~~p~~~f~~HtlsITDl~ig~Gg~~ 188 (476)
T KOG0646|consen 118 VLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD---------NDHSVKPLHIFSDHTLSITDLQIGSGGTN 188 (476)
T ss_pred HHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc---------cCCCccceeeeccCcceeEEEEecCCCcc
Confidence 357999999999999999999999999999999985422111 112456788999999999999988764
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
..++|+|.|.++++||+..+.....+. ....+.+++.+|-+..+++|+.+|.|.+.
T Consensus 189 ~rl~TaS~D~t~k~wdlS~g~LLlti~---fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~ 265 (476)
T KOG0646|consen 189 ARLYTASEDRTIKLWDLSLGVLLLTIT---FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEEN 265 (476)
T ss_pred ceEEEecCCceEEEEEeccceeeEEEe---cCCcceeEEEcccccEEEecCCcceEEeeehhcCCccccccccccccccc
Confidence 489999999999999999987654443 45679999999999999999999999874
Q ss_pred --------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE-EeCCCc
Q psy15157 251 --------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS-SGKDSL 309 (344)
Q Consensus 251 --------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s-~~~dg~ 309 (344)
+.||..|++|+.||.+.|||+.+.++++++.. ..++|+.+.+.|=-+-.+. -.....
T Consensus 266 t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~--~kgpVtnL~i~~~~~~~~l~~~~~ps 343 (476)
T KOG0646|consen 266 TQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQT--SKGPVTNLQINPLERGIILFEHKQPS 343 (476)
T ss_pred ceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhh--hccccceeEeeccccceecccccCcc
Confidence 67899999999999999999999999988862 2357999998664333333 223333
Q ss_pred EEEEEc
Q psy15157 310 VKLWEL 315 (344)
Q Consensus 310 i~vwd~ 315 (344)
+-.|++
T Consensus 344 ~~~~~l 349 (476)
T KOG0646|consen 344 LPNPHL 349 (476)
T ss_pred CCchHh
Confidence 444444
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-19 Score=155.07 Aligned_cols=204 Identities=20% Similarity=0.272 Sum_probs=148.9
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCcccccc--CCCCC-------CcCCCCCCceEEEecCCcCCeE
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSS--MESSE-------PQNDQQGHPVIRTLYDHIEEVT 183 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~h~~~v~ 183 (344)
.+.||.+.|.+++|.+ +...|++|+.||.|.|||++-...... ++... +.......+.+..-..|...|.
T Consensus 139 ~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ 218 (720)
T KOG0321|consen 139 LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIF 218 (720)
T ss_pred eecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCcee
Confidence 4679999999999999 456899999999999999964221110 00000 0011111222334455666666
Q ss_pred E---EEEcCCCCEEEEEeC-CCcEEEEEcCCCcccc------ceeeecc---ccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 184 C---LEFHPSAPILASGSK-DKTVKMFDYSKSSVRK------AHKTIQE---STFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 184 ~---~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~------~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
+ +.+..|...||+++. |+.|+|||+++..... ......+ ...+.++..+..|.++++.+.|+.|.+|
T Consensus 219 ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~y 298 (720)
T KOG0321|consen 219 SSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFY 298 (720)
T ss_pred eeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEE
Confidence 6 666678888998887 9999999999864321 1111122 3457888888899999988889999999
Q ss_pred ---------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC-CCEEE
Q psy15157 251 ---------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN-GKYLL 302 (344)
Q Consensus 251 ---------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~ 302 (344)
+|++.++++|+.|...++|.+.+.+.-..+..+|. ..|++++|.|. -.-++
T Consensus 299 nm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght-~eVt~V~w~pS~~t~v~ 377 (720)
T KOG0321|consen 299 NMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHT-REVTTVRWLPSATTPVA 377 (720)
T ss_pred eccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcc-eEEEEEeeccccCCCce
Confidence 79999999999999999999998876666655665 47999999883 23378
Q ss_pred EEeCCCcEEEEEcCCC
Q psy15157 303 SSGKDSLVKLWELSSA 318 (344)
Q Consensus 303 s~~~dg~i~vwd~~~~ 318 (344)
++++|..+++|++..+
T Consensus 378 TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 378 TCSDDFRVKIWRLSNG 393 (720)
T ss_pred eeccCcceEEEeccCc
Confidence 8899999999999654
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.1e-19 Score=140.03 Aligned_cols=198 Identities=17% Similarity=0.285 Sum_probs=154.6
Q ss_pred ecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCC--------------------------CCcCCCCC
Q psy15157 116 TSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESS--------------------------EPQNDQQG 168 (344)
Q Consensus 116 ~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~--------------------------~~~~~~~~ 168 (344)
.+|+-.|..+.|-| |...|.+++-|.+++|||.++......+.-. ....+...
T Consensus 98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S 177 (397)
T KOG4283|consen 98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS 177 (397)
T ss_pred ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccC
Confidence 57899999999998 6679999999999999999874332211111 11124456
Q ss_pred CceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCc-cc-----------ccee-eeccccceEEEEEecC
Q psy15157 169 HPVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSS-VR-----------KAHK-TIQESTFVRCLSFHPC 234 (344)
Q Consensus 169 ~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~-~~-----------~~~~-~~~~~~~v~~~~~~~~ 234 (344)
+....++.+|.+.|.++.|+|... .|++|+.||.|++||++... +. ...+ ...|.+.+..++|..+
T Consensus 178 Gs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd 257 (397)
T KOG4283|consen 178 GSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSD 257 (397)
T ss_pred CcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeeccc
Confidence 677889999999999999999877 67899999999999998641 11 1111 2346778999999999
Q ss_pred CCEEEEEeCCCEEEEEc----------------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC
Q psy15157 235 GDYMVVGTDHFVLRLYS----------------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286 (344)
Q Consensus 235 ~~~l~~~~~~~~i~~~~----------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 286 (344)
+.++++++.|..+++|. .+...++---.++.+.++++-++..+..+..+ .
T Consensus 258 ~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h--~ 335 (397)
T KOG4283|consen 258 ARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTH--L 335 (397)
T ss_pred chhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecc--c
Confidence 99999999999999991 12223333345688999999999999888744 3
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
..|.+..+-|+-+...+|..|+.|..|-.
T Consensus 336 k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 336 KRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ceeeEEeecCchhhhhccccCCccccccc
Confidence 57999999999999999999999999976
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=152.27 Aligned_cols=176 Identities=22% Similarity=0.432 Sum_probs=152.9
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
....-.+.+++.+||.+..+++..||.|.|||+.+ ...++.|.+|.+.+.||..+++|..|.
T Consensus 506 tssapaCyALa~spDakvcFsccsdGnI~vwDLhn------------------q~~VrqfqGhtDGascIdis~dGtklW 567 (705)
T KOG0639|consen 506 TSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN------------------QTLVRQFQGHTDGASCIDISKDGTKLW 567 (705)
T ss_pred CCcchhhhhhhcCCccceeeeeccCCcEEEEEccc------------------ceeeecccCCCCCceeEEecCCCceee
Confidence 33345688899999999999999999999999953 567899999999999999999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCC
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSD 253 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~ 253 (344)
||+-|.+|+.||+++++....+. ....|.++.++|++.++++|..++.+.+. .+-
T Consensus 568 TGGlDntvRcWDlregrqlqqhd---F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~c 644 (705)
T KOG0639|consen 568 TGGLDNTVRCWDLREGRQLQQHD---FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYC 644 (705)
T ss_pred cCCCccceeehhhhhhhhhhhhh---hhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEeccc
Confidence 99999999999999986544433 34568999999999999999999888874 678
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
|+++++.+.|..+-.|...-|..+.... +.+.|.++.++.|.+||+||+.|..-.||.+
T Consensus 645 GkwfvStGkDnlLnawrtPyGasiFqsk---E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 645 GKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred CceeeecCchhhhhhccCccccceeecc---ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 9999999999999999998887776654 2357999999999999999999998888875
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-18 Score=138.01 Aligned_cols=143 Identities=24% Similarity=0.328 Sum_probs=114.7
Q ss_pred ceeEEecCCCceEEEEECCCCC--EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQ--LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~--~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
+...+..|.+.|+++.|.+.-. .|++|+.||.|.+|+.. .+..+.++++|.+.|+.++.|
T Consensus 75 qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~------------------~W~~~~slK~H~~~Vt~lsiH 136 (362)
T KOG0294|consen 75 QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG------------------SWELLKSLKAHKGQVTDLSIH 136 (362)
T ss_pred hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcC------------------CeEEeeeecccccccceeEec
Confidence 4456778999999999998665 89999999999999984 477889999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC----------------------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC---------------------------------- 234 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---------------------------------- 234 (344)
|.+++-++.+.|+.+++||+..++....... .+. .+.+.|+|.
T Consensus 137 PS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~--at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~ 213 (362)
T KOG0294|consen 137 PSGKLALSVGGDQVLRTWNLVRGRVAFVLNL-KNK--ATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILC 213 (362)
T ss_pred CCCceEEEEcCCceeeeehhhcCccceeecc-CCc--ceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhcccccee
Confidence 9999999999999999999988764332221 111 111333333
Q ss_pred -----CCEEEEEeCCCEEEEE-------------------------cCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 235 -----GDYMVVGTDHFVLRLY-------------------------SSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 235 -----~~~l~~~~~~~~i~~~-------------------------~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
+.++++|.+++.+.+| .+++.+|+++|.||.|++||++..
T Consensus 214 ~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 214 ATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred eeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 4466677788888887 567789999999999999998876
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=146.08 Aligned_cols=165 Identities=28% Similarity=0.403 Sum_probs=132.2
Q ss_pred ecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CE
Q psy15157 116 TSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PI 193 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~ 193 (344)
.+|++.|.+++|+.+ .+.||+||.|.+|++||+.+ +++..++..|...|.++.|+|.. ..
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~------------------g~p~~s~~~~~k~Vq~l~wh~~~p~~ 301 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDT------------------GKPKSSITHHGKKVQTLEWHPYEPSV 301 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCceEEEEEcCC------------------CCcceehhhcCCceeEEEecCCCceE
Confidence 479999999999875 45899999999999999965 45667778899999999999965 58
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~ 273 (344)
|++|+.|++|.+.|.+..... .....-.+.|-.++|+|... ..++++..||+++-+|+|+
T Consensus 302 LLsGs~D~~V~l~D~R~~~~s--~~~wk~~g~VEkv~w~~~se------------------~~f~~~tddG~v~~~D~R~ 361 (463)
T KOG0270|consen 302 LLSGSYDGTVALKDCRDPSNS--GKEWKFDGEVEKVAWDPHSE------------------NSFFVSTDDGTVYYFDIRN 361 (463)
T ss_pred EEeccccceEEeeeccCcccc--CceEEeccceEEEEecCCCc------------------eeEEEecCCceEEeeecCC
Confidence 999999999999999963221 11223345688899988543 3444788999999999997
Q ss_pred C-eEEeeecccCCCccEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCee
Q psy15157 274 S-KCVATFSKAHDGAEISSLTFTRN-GKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 274 ~-~~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
. +++.++. .|.+ +|.++++++. ...|++++.|+.|++|++.....
T Consensus 362 ~~~~vwt~~-AHd~-~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~ 408 (463)
T KOG0270|consen 362 PGKPVWTLK-AHDD-EISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSP 408 (463)
T ss_pred CCCceeEEE-eccC-CcceEEecCCCCcceeeccccceEEEEeecCCCC
Confidence 6 7888886 5654 7999999874 44688899999999999976554
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-18 Score=136.09 Aligned_cols=169 Identities=22% Similarity=0.289 Sum_probs=135.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC--
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-- 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-- 192 (344)
...|.++|.+++|+.||..+++|+.|+.+++||+.++ ....+..|.++|.++.|-+...
T Consensus 68 ~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-------------------Q~~~v~~Hd~pvkt~~wv~~~~~~ 128 (347)
T KOG0647|consen 68 QQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-------------------QVSQVAAHDAPVKTCHWVPGMNYQ 128 (347)
T ss_pred hhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-------------------CeeeeeecccceeEEEEecCCCcc
Confidence 3679999999999999999999999999999999642 4567788999999999988665
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeee---------------------------------------ccccceEEEEEec
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTI---------------------------------------QESTFVRCLSFHP 233 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------------------------------------~~~~~v~~~~~~~ 233 (344)
.|+|||.|.+|+.||.+.......+... .....++|++..+
T Consensus 129 cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~ 208 (347)
T KOG0647|consen 129 CLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQ 208 (347)
T ss_pred eeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEe
Confidence 8999999999999998875432211100 0123468899888
Q ss_pred CCCEEEEEeCCCEEEEE----------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEee
Q psy15157 234 CGDYMVVGTDHFVLRLY----------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVAT 279 (344)
Q Consensus 234 ~~~~l~~~~~~~~i~~~----------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 279 (344)
+.+..+.|+-+|.+.+. .|.-..|+|++.||++.+||-.....+..
T Consensus 209 d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~ 288 (347)
T KOG0647|consen 209 DKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKT 288 (347)
T ss_pred cCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhc
Confidence 88888999888887774 45556789999999999999877766665
Q ss_pred ecccCCCccEEEEEEccCCCEEEEE
Q psy15157 280 FSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 280 ~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
.. .+. .+|++++|+.+|.+++-+
T Consensus 289 s~-~~~-qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 289 SE-THP-QPITCCSFNRNGSIFAYA 311 (347)
T ss_pred cC-cCC-CccceeEecCCCCEEEEE
Confidence 54 333 579999999999998765
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-18 Score=143.98 Aligned_cols=206 Identities=18% Similarity=0.310 Sum_probs=154.8
Q ss_pred ceeEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCC-------------CCCc-------------
Q psy15157 111 ETAYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMES-------------SEPQ------------- 163 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~-------------~~~~------------- 163 (344)
.+..+..|.++|.++.|+| +-..+++.|+||+|++-|+++......... .+..
T Consensus 226 ~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~ 305 (498)
T KOG4328|consen 226 GVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNV 305 (498)
T ss_pred ceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEE
Confidence 3566789999999999999 556899999999999999976422110000 0000
Q ss_pred -CCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccc--eeeeccccceEEEEEecCCCEEE
Q psy15157 164 -NDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKA--HKTIQESTFVRCLSFHPCGDYMV 239 (344)
Q Consensus 164 -~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~ 239 (344)
.....+.....+.-|...|++++++|-.. +|+||+.|++++|||++.-..... +....|...|.+..|+|.+..|+
T Consensus 306 iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~ 385 (498)
T KOG4328|consen 306 IDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLL 385 (498)
T ss_pred EEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceE
Confidence 00111222334556888999999999665 889999999999999998655543 56667889999999999988899
Q ss_pred EEeCCCEEEEE--------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCc
Q psy15157 240 VGTDHFVLRLY--------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287 (344)
Q Consensus 240 ~~~~~~~i~~~--------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 287 (344)
+.+.|..|++| +|+..++++|-.-..|-|+|...++.+..+..... .
T Consensus 386 TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~-~ 464 (498)
T KOG4328|consen 386 TTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPES-S 464 (498)
T ss_pred eeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccc-c
Confidence 99999999997 78889999999999999999999998877653332 2
Q ss_pred cEEEE-EEccCCCEEEE-EeCCCcEEEEEcCC
Q psy15157 288 EISSL-TFTRNGKYLLS-SGKDSLVKLWELSS 317 (344)
Q Consensus 288 ~v~~i-~~~~~~~~l~s-~~~dg~i~vwd~~~ 317 (344)
.|.++ .|+|-+..+++ ++..|.|+||--..
T Consensus 465 tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k~ 496 (498)
T KOG4328|consen 465 TIPSVNEFHPMRDTLAAGGNSSGKIYVFTNKK 496 (498)
T ss_pred ccccceeecccccceeccCCccceEEEEecCC
Confidence 34444 79998884555 45778888886543
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=143.75 Aligned_cols=175 Identities=25% Similarity=0.353 Sum_probs=140.0
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCc
Q psy15157 123 RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKT 202 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 202 (344)
.+++|+.+|..+++|+.||++|||++.++ ..+.....|.+.|.++.|+|||++|++-+.| .
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~------------------~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~ 208 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSM------------------LTILEEIAHHAEVKDLDFSPDGKFLASIGAD-S 208 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcc------------------hhhhhhHhhcCccccceeCCCCcEEEEecCC-c
Confidence 88999999999999999999999997542 2344556799999999999999999999999 9
Q ss_pred EEEEEcCCCccccceeeeccccceEEEEEecCC---CEE--EEEeCCCEEEEE---------------------------
Q psy15157 203 VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG---DYM--VVGTDHFVLRLY--------------------------- 250 (344)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l--~~~~~~~~i~~~--------------------------- 250 (344)
.+||+.+++.................+.|+.++ .+. +.-...+.++.|
T Consensus 209 ~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~ 288 (398)
T KOG0771|consen 209 ARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLA 288 (398)
T ss_pred eEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEE
Confidence 999999998544433323334445666777665 222 222233344432
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+.+|++++.|+.||.|-|++..+.+.++.++..|.. .|+.+.|+||.+++++.+.|..+.|..+.-
T Consensus 289 VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~-~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 289 VSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLG-FVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhhee-eeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 789999999999999999999999999999888875 799999999999999999999988887754
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-18 Score=145.10 Aligned_cols=198 Identities=17% Similarity=0.253 Sum_probs=162.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.-.|++......|+++|+..+.|+|||+.. ..+.+.+.+|...|+++.++....+|++++..
T Consensus 81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~------------------kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~g 142 (673)
T KOG4378|consen 81 NAFCVACASQSLYEISGGQSGCVKIWDLRA------------------KLIHRFLKDHQSTVTYVDYNNTDEYIASVSDG 142 (673)
T ss_pred hHHHHhhhhcceeeeccCcCceeeehhhHH------------------HHHhhhccCCcceeEEEEecCCcceeEEeccC
Confidence 445555555568999999999999999963 34466788999999999999999999999999
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEE-EEEeCCCEEEEEc-------------------------CCC
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGTDHFVLRLYS-------------------------SDG 254 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~~-------------------------~~~ 254 (344)
|.|.|..+.++.....+.. .....++-+.|+|..+++ .+++++|.+.+|+ .+.
T Consensus 143 Gdiiih~~~t~~~tt~f~~-~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne 221 (673)
T KOG4378|consen 143 GDIIIHGTKTKQKTTTFTI-DSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNE 221 (673)
T ss_pred CcEEEEecccCccccceec-CCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCcc
Confidence 9999999998765555543 334567789999987655 5688999999992 345
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC-eeEEEeecCCCcCce
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-RCLIAYTGAGSMGQQ 333 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~ 333 (344)
.+|++.+.|..|.+||.++.+....+.-. .+..+++|.++|.+|+.|+..|.|..||++.. .++.++..|.....+
T Consensus 222 ~l~vsVG~Dkki~~yD~~s~~s~~~l~y~---~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~ 298 (673)
T KOG4378|consen 222 ALLVSVGYDKKINIYDIRSQASTDRLTYS---HPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTR 298 (673)
T ss_pred ceEEEecccceEEEeecccccccceeeec---CCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeE
Confidence 78899999999999999988877777533 36899999999999999999999999999975 578888888888777
Q ss_pred eeeeeec
Q psy15157 334 FELTLTV 340 (344)
Q Consensus 334 ~~~~~~~ 340 (344)
+++..++
T Consensus 299 vafq~s~ 305 (673)
T KOG4378|consen 299 VAFQPSP 305 (673)
T ss_pred EEeeecc
Confidence 7776654
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.9e-18 Score=148.35 Aligned_cols=143 Identities=20% Similarity=0.203 Sum_probs=100.2
Q ss_pred CccceeEEecCCCceEEEEECCCCC---EEEEEeCCCeEEEEEcCCccccccCCC---CCCcCCCCCCceE---------
Q psy15157 108 AQYETAYVTSHKSPCRAGAFSIDGQ---LCATGSVDASIKILDVDRMLAKSSMES---SEPQNDQQGHPVI--------- 172 (344)
Q Consensus 108 ~~~~~~~~~~h~~~v~~~~~s~~~~---~l~sg~~dg~v~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~--------- 172 (344)
....+..+.||.+.|++++|...+. +|||+|.|..||||.+.-......... .....+.......
T Consensus 180 ~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ 259 (764)
T KOG1063|consen 180 SFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISF 259 (764)
T ss_pred ceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEeh
Confidence 3445677899999999999987444 899999999999999853221110000 0000011111111
Q ss_pred -EEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcc--------------------------------------
Q psy15157 173 -RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSV-------------------------------------- 213 (344)
Q Consensus 173 -~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-------------------------------------- 213 (344)
..+.||.+.|.++.|+|.+..|+|++.|.++.+|.-.+..-
T Consensus 260 eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg 339 (764)
T KOG1063|consen 260 EALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGG 339 (764)
T ss_pred hhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCc
Confidence 23459999999999999999999999999999997433200
Q ss_pred ------------ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 214 ------------RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 214 ------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
.....+.+|...|+.+.|+|.|.++++.+.|.+-|+|
T Consensus 340 ~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlF 388 (764)
T KOG1063|consen 340 FHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLF 388 (764)
T ss_pred EEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeee
Confidence 0011223467789999999999999999999999986
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=133.30 Aligned_cols=164 Identities=27% Similarity=0.437 Sum_probs=125.7
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
..|..++.+++|.+ ...+++|+.||.|+.+|+++. ....+..|...|.|+..++....++
T Consensus 51 ~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~-------------------~~~~igth~~~i~ci~~~~~~~~vI 110 (323)
T KOG1036|consen 51 FKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTG-------------------NEDQIGTHDEGIRCIEYSYEVGCVI 110 (323)
T ss_pred eecCCceeeeeccC-CceEEEeccCceEEEEEecCC-------------------cceeeccCCCceEEEEeeccCCeEE
Confidence 46899999999986 667899999999999999742 2345677999999999999888999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------- 250 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------- 250 (344)
+||.|++|++||.+.......+ .....|.|+.. .|+.|++|+.+..+.+|
T Consensus 111 sgsWD~~ik~wD~R~~~~~~~~---d~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~ 185 (323)
T KOG1036|consen 111 SGSWDKTIKFWDPRNKVVVGTF---DQGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVAL 185 (323)
T ss_pred EcccCccEEEEecccccccccc---ccCceEEEEec--cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEE
Confidence 9999999999998853222111 11223443332 44555555555555554
Q ss_pred -------------------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCe
Q psy15157 251 -------------------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSK 275 (344)
Q Consensus 251 -------------------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~ 275 (344)
+|--..|+||+.||.|-+||+.+.+
T Consensus 186 ~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rK 265 (323)
T KOG1036|consen 186 VPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRK 265 (323)
T ss_pred ecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchh
Confidence 5556779999999999999999998
Q ss_pred EEeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 276 CVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 276 ~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
.+..+... . ..|.+++|+.+|..||.++.
T Consensus 266 rl~q~~~~-~-~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 266 RLKQLAKY-E-TSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred hhhhccCC-C-CceEEEEeccCCCeEEEEec
Confidence 88888644 2 35999999999999999874
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-18 Score=152.55 Aligned_cols=186 Identities=22% Similarity=0.338 Sum_probs=155.9
Q ss_pred eEEecCCCceEEEEECC---CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 113 AYVTSHKSPCRAGAFSI---DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~---~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..+.+|...|.|+.||. ..++||+++.|+.|+|||+. ....+++++.+|...|+++.|..
T Consensus 495 ~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~-----------------rny~l~qtld~HSssITsvKFa~ 557 (1080)
T KOG1408|consen 495 CFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVK-----------------RNYDLVQTLDGHSSSITSVKFAC 557 (1080)
T ss_pred hheecccceeEEEeecCchhhhHhhhhccCCceEEEEecc-----------------cccchhhhhcccccceeEEEEee
Confidence 34679999999999985 35699999999999999995 45677899999999999999988
Q ss_pred CC--CEEEEEeCCCcEEEEEcCCCcccccee---eeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------
Q psy15157 190 SA--PILASGSKDKTVKMFDYSKSSVRKAHK---TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 190 ~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------- 250 (344)
+| ..+++++.|..|.+--.........+. .......++.++..|..+++++++.|..|++|
T Consensus 558 ~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs 637 (1080)
T KOG1408|consen 558 NGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGS 637 (1080)
T ss_pred cCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeeccc
Confidence 77 589999999988754333211111111 11234568999999999999999999999998
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+|.|-|+++.+.|.++.++|..+++++....+ |.. .|+.+.|.+|-+.|++.+.||.|.||.+..
T Consensus 638 ~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~G-HsE-~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 638 RDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTG-HSE-AVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred ccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcC-cch-heeeeeecccchhheeecCCceEEEEECch
Confidence 79999999999999999999999999999874 443 599999999999999999999999999864
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-17 Score=150.69 Aligned_cols=176 Identities=22% Similarity=0.327 Sum_probs=140.5
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+.-.+-++++++|+.+|+++|.||.|-.|++-++.. ......+++|.++|.++.|+|++++
T Consensus 91 iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D------------------~s~~~~lrgh~apVl~l~~~p~~~f 152 (933)
T KOG1274|consen 91 ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDD------------------SSQEKVLRGHDAPVLQLSYDPKGNF 152 (933)
T ss_pred eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccc------------------cchheeecccCCceeeeeEcCCCCE
Confidence 3445567999999999999999999999999999853 4456788999999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeec------cccceEEEEEecCCCEEEEEeCCCEEEEE-----------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQ------ESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------- 250 (344)
||+.+.||.|++||+.++.+...+.... ....+..++|+|+|..+++...++.|.+|
T Consensus 153 LAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~s 232 (933)
T KOG1274|consen 153 LAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSS 232 (933)
T ss_pred EEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccc
Confidence 9999999999999999886544432211 13456779999998888888888888875
Q ss_pred --------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEE
Q psy15157 251 --------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vw 313 (344)
+|.|.|||+++.||.|.|||..+-+. +.....|.+++|.|+.+-+-.-...|...+|
T Consensus 233 s~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~------~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 233 SKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER------HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred cceEEEEEcCCCcEEeeeccCCcEEEEecccchh------ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 89999999999999999999988222 2223469999999988866544444444333
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.9e-18 Score=147.46 Aligned_cols=204 Identities=18% Similarity=0.197 Sum_probs=145.2
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-E
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-I 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 193 (344)
...|...|..+.|-|-...|++++.|.++++||++... ..-...+.+|.+.|.+++|+|... .
T Consensus 96 ~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~----------------l~G~~~~~GH~~SvkS~cf~~~n~~v 159 (720)
T KOG0321|consen 96 PLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR----------------LVGGRLNLGHTGSVKSECFMPTNPAV 159 (720)
T ss_pred cccccceeEeeccCCCceeEEEccCCceeeeeeeccce----------------eecceeecccccccchhhhccCCCcc
Confidence 35899999999999966699999999999999997421 111234789999999999999665 8
Q ss_pred EEEEeCCCcEEEEEcCCCcccc-------------------------ceeeeccccceEE---EEEecCCCEEEEEeC-C
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRK-------------------------AHKTIQESTFVRC---LSFHPCGDYMVVGTD-H 244 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~-------------------------~~~~~~~~~~v~~---~~~~~~~~~l~~~~~-~ 244 (344)
|++|+.||.|.|||++-..... ......+...|.+ +-+..|...|++++. |
T Consensus 160 F~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D 239 (720)
T KOG0321|consen 160 FCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAAD 239 (720)
T ss_pred eeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCC
Confidence 9999999999999986542100 0000112223333 445567888888777 9
Q ss_pred CEEEEE----------------------------------cCCCCEEEEEeCCCcEEEEeCCCCe--EEeeecccCCCcc
Q psy15157 245 FVLRLY----------------------------------SSDGRIYCSGSKDGDIKIWDGVSSK--CVATFSKAHDGAE 288 (344)
Q Consensus 245 ~~i~~~----------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~ 288 (344)
+.|++| +..|.++++.+.|+.|++||+.+.. ++..+.+......
T Consensus 240 ~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf 319 (720)
T KOG0321|consen 240 STIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSF 319 (720)
T ss_pred cceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCccccee
Confidence 999999 5678888888899999999998653 3333332211111
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCe-eEEEeecCCCcCcee
Q psy15157 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSAR-CLIAYTGAGSMGQQF 334 (344)
Q Consensus 289 v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~ 334 (344)
-..-..+|++.+|++|+.|...++|.+.+.+ ....+.||.--...+
T Consensus 320 ~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V 366 (720)
T KOG0321|consen 320 YVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTV 366 (720)
T ss_pred eeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEE
Confidence 1222468999999999999999999998864 344555664433333
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.1e-16 Score=134.28 Aligned_cols=204 Identities=18% Similarity=0.246 Sum_probs=140.2
Q ss_pred EEecCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+..| ..+.+++|+|+++.+ ++++.++.|++||..++ .....+..+.. +..++|+|+++
T Consensus 26 ~~~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~------------------~~~~~~~~~~~-~~~~~~~~~g~ 85 (300)
T TIGR03866 26 TFPVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATG------------------EVIGTLPSGPD-PELFALHPNGK 85 (300)
T ss_pred EEECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCC------------------cEEEeccCCCC-ccEEEECCCCC
Confidence 34444 347889999999876 67778999999998642 23333433333 46789999998
Q ss_pred EEE-EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCE-EEE---------------------
Q psy15157 193 ILA-SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV-LRL--------------------- 249 (344)
Q Consensus 193 ~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-i~~--------------------- 249 (344)
.++ +++.|+.|++||+.+.+....+ .....+.+++|+|+|.+++++..++. +..
T Consensus 86 ~l~~~~~~~~~l~~~d~~~~~~~~~~---~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 162 (300)
T TIGR03866 86 ILYIANEDDNLVTVIDIETRKVLAEI---PVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFA 162 (300)
T ss_pred EEEEEcCCCCeEEEEECCCCeEEeEe---eCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEE
Confidence 665 4566899999999886543322 22334678999999999998876543 222
Q ss_pred -EcCCCCEEEEE-eCCCcEEEEeCCCCeEEeeecccC-----CCccEEEEEEccCCCEEEE-EeCCCcEEEEEcCCCeeE
Q psy15157 250 -YSSDGRIYCSG-SKDGDIKIWDGVSSKCVATFSKAH-----DGAEISSLTFTRNGKYLLS-SGKDSLVKLWELSSARCL 321 (344)
Q Consensus 250 -~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~l~s-~~~dg~i~vwd~~~~~~~ 321 (344)
|+++|++++.+ ..++.|++||+.+++.+..+.... .......+.|+|+++++++ .+.++.|.+||+++++.+
T Consensus 163 ~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~ 242 (300)
T TIGR03866 163 EFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVL 242 (300)
T ss_pred EECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence 36788877544 568999999999998776653111 1112456889999998655 456778999999999887
Q ss_pred EEeecCCCcCceeeeeeeccCC
Q psy15157 322 IAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..+..+. ....+.++++++
T Consensus 243 ~~~~~~~---~~~~~~~~~~g~ 261 (300)
T TIGR03866 243 DYLLVGQ---RVWQLAFTPDEK 261 (300)
T ss_pred EEEEeCC---CcceEEECCCCC
Confidence 6654322 234555666553
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=149.40 Aligned_cols=126 Identities=19% Similarity=0.233 Sum_probs=98.9
Q ss_pred ceeEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
....+.+|.+.|+.+.|+| +..+|||||.|..|+||.+..+..... ......+.+..-.|.++.|||
T Consensus 71 ~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~L------------Sape~~~g~~~~~vE~l~fHp 138 (1012)
T KOG1445|consen 71 DIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKL------------SAPEIDVGGGNVIVECLRFHP 138 (1012)
T ss_pred ccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCccccc------------CCcceeecCCceEEEEeeccc
Confidence 4557889999999999999 566999999999999999974321111 112233444455789999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
...-|+..+..|+++|||+.+++.. +...+|...|.+..|+.||..+++++.|..+++|
T Consensus 139 TaDgil~s~a~g~v~i~D~stqk~~--~el~~h~d~vQSa~WseDG~llatscKdkqirif 197 (1012)
T KOG1445|consen 139 TADGILASGAHGSVYITDISTQKTA--VELSGHTDKVQSADWSEDGKLLATSCKDKQIRIF 197 (1012)
T ss_pred CcCceEEeccCceEEEEEcccCcee--ecccCCchhhhccccccCCceEeeecCCcceEEe
Confidence 7665555556799999999998543 4556788899999999999999999999999998
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.8e-18 Score=143.78 Aligned_cols=191 Identities=17% Similarity=0.306 Sum_probs=157.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
..-|+++.+.|||+-|++|+.-.++.|||+.. .+......+....-....++.+||.+..++|.
T Consensus 465 dnyiRSckL~pdgrtLivGGeastlsiWDLAa----------------pTprikaeltssapaCyALa~spDakvcFscc 528 (705)
T KOG0639|consen 465 DNYIRSCKLLPDGRTLIVGGEASTLSIWDLAA----------------PTPRIKAELTSSAPACYALAISPDAKVCFSCC 528 (705)
T ss_pred ccceeeeEecCCCceEEeccccceeeeeeccC----------------CCcchhhhcCCcchhhhhhhcCCccceeeeec
Confidence 45688999999999999999999999999963 11222223333344577889999999999999
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCCCCE
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSDGRI 256 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~~~~ 256 (344)
.||.|.|||+.+....+.+ .+|...+.||..+++|..|.+|+-|++++-| .|.+.+
T Consensus 529 sdGnI~vwDLhnq~~Vrqf--qGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dW 606 (705)
T KOG0639|consen 529 SDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDW 606 (705)
T ss_pred cCCcEEEEEcccceeeecc--cCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccc
Confidence 9999999999987665544 5788899999999999999999999999999 689999
Q ss_pred EEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 257 YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 257 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
++.|-.++.+.|......+.. .+. .|+ +-|.++.|.+.|+++++.+.|+.+-.|.+.-|..+...+...++
T Consensus 607 lavGMens~vevlh~skp~ky-qlh-lhe-ScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsV 677 (705)
T KOG0639|consen 607 LAVGMENSNVEVLHTSKPEKY-QLH-LHE-SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV 677 (705)
T ss_pred eeeecccCcEEEEecCCccce-eec-ccc-cEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcc
Confidence 999999999988886654433 232 333 56999999999999999999999999999999888877765544
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.4e-17 Score=129.76 Aligned_cols=204 Identities=19% Similarity=0.321 Sum_probs=152.0
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcC-----CCCC----------CceEEEecC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQN-----DQQG----------HPVIRTLYD 177 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~-----~~~~----------~~~~~~~~~ 177 (344)
.++.+|..+|++++||++|+.|+|+|.|.+|.+||+..+..........+.+ .... .+.+..+..
T Consensus 59 r~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~ 138 (405)
T KOG1273|consen 59 RMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSD 138 (405)
T ss_pred hhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecC
Confidence 3578999999999999999999999999999999997654332221111100 0000 111111111
Q ss_pred C-------------cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC
Q psy15157 178 H-------------IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 178 h-------------~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 244 (344)
. .....+..|.+.|+++++|...|.+.++|..+.++...++... ...|..+.++..|+.++.-+.|
T Consensus 139 ~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits-~~~IK~I~~s~~g~~liiNtsD 217 (405)
T KOG1273|consen 139 PKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITS-VQAIKQIIVSRKGRFLIINTSD 217 (405)
T ss_pred CceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeech-heeeeEEEEeccCcEEEEecCC
Confidence 0 0111233578889999999999999999999987776666433 4678999999999999999999
Q ss_pred CEEEEE----------------------------------cCCCCEEEEEeCC-CcEEEEeCCCCeEEeeecccCCCccE
Q psy15157 245 FVLRLY----------------------------------SSDGRIYCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEI 289 (344)
Q Consensus 245 ~~i~~~----------------------------------~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v 289 (344)
.+|+.| +.+|.|++.|+.. ..++||....|..+..+.+.. +...
T Consensus 218 RvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~k-gE~l 296 (405)
T KOG1273|consen 218 RVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTK-GEEL 296 (405)
T ss_pred ceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCc-hhhe
Confidence 999998 6789998877643 569999999999998887443 3458
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
..+.|+|-...+++- ..|.|++|....-.
T Consensus 297 ~DV~whp~rp~i~si-~sg~v~iw~~~~~e 325 (405)
T KOG1273|consen 297 LDVNWHPVRPIIASI-ASGVVYIWAVVQVE 325 (405)
T ss_pred eecccccceeeeeec-cCCceEEEEeeccc
Confidence 889999988888877 78999999875543
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-16 Score=135.38 Aligned_cols=199 Identities=17% Similarity=0.268 Sum_probs=153.9
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.-|.|++|.++|+ ++||..+|.|.||+..+ ....+....|.+.|.+++...+|.+| ||+.
T Consensus 247 k~Vl~v~F~engd-viTgDS~G~i~Iw~~~~------------------~~~~k~~~aH~ggv~~L~~lr~Gtll-SGgK 306 (626)
T KOG2106|consen 247 KFVLCVTFLENGD-VITGDSGGNILIWSKGT------------------NRISKQVHAHDGGVFSLCMLRDGTLL-SGGK 306 (626)
T ss_pred eEEEEEEEcCCCC-EEeecCCceEEEEeCCC------------------ceEEeEeeecCCceEEEEEecCccEe-ecCc
Confidence 5799999999886 68999999999999843 34444555999999999999998655 5999
Q ss_pred CCcEEEEEcCCCccc--------------------------------------cceeeeccccceEEEEEecCCCEEEEE
Q psy15157 200 DKTVKMFDYSKSSVR--------------------------------------KAHKTIQESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 200 dg~i~iwd~~~~~~~--------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~ 241 (344)
|+.|..||-.-.+.. .......|....+.++.+|+.+.++++
T Consensus 307 DRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~ 386 (626)
T KOG2106|consen 307 DRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTC 386 (626)
T ss_pred cceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeec
Confidence 999999992211100 001123455667889999999999999
Q ss_pred eCCCEEEEE--------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 242 TDHFVLRLY--------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 242 ~~~~~i~~~--------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+.|+.+++| +|.| .++.|...|...+.|.++...+..-. . +.+++++.|+|+|.+|
T Consensus 387 gqdk~v~lW~~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~-d--~~~ls~v~ysp~G~~l 462 (626)
T KOG2106|consen 387 GQDKHVRLWNDHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHT-D--NEQLSVVRYSPDGAFL 462 (626)
T ss_pred cCcceEEEccCCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEe-c--CCceEEEEEcCCCCEE
Confidence 999999998 6778 88999999999999999866554443 2 4689999999999999
Q ss_pred EEEeCCCcEEEEEcCCC-eeEEEeecCCCcCceeeeeeeccCC
Q psy15157 302 LSSGKDSLVKLWELSSA-RCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 302 ~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+.|+.|+.|++|-+..+ +....+.-+.+ .....+.|++|..
T Consensus 463 Avgs~d~~iyiy~Vs~~g~~y~r~~k~~g-s~ithLDwS~Ds~ 504 (626)
T KOG2106|consen 463 AVGSHDNHIYIYRVSANGRKYSRVGKCSG-SPITHLDWSSDSQ 504 (626)
T ss_pred EEecCCCeEEEEEECCCCcEEEEeeeecC-ceeEEeeecCCCc
Confidence 99999999999999764 44444443333 5667777777654
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-18 Score=160.13 Aligned_cols=206 Identities=22% Similarity=0.319 Sum_probs=155.0
Q ss_pred CCceEEEEECCCCCE----EEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-E
Q psy15157 119 KSPCRAGAFSIDGQL----CATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-I 193 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~----l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 193 (344)
...-+.++|.+.|.. +|.|..||.|.+||..... .......+.+...|.+.|..+.|++... +
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~------------~~~~~~~la~~~~h~G~V~gLDfN~~q~nl 131 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASII------------ANASEEVLATKSKHTGPVLGLDFNPFQGNL 131 (1049)
T ss_pred cccceeeeecccCCCccceeeccccCCceEEecchhhc------------cCcchHHHhhhcccCCceeeeeccccCCce
Confidence 456788999987664 8999999999999986421 1233456778889999999999999765 9
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC-CCEEEEEeCCCEEEEE----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~---------------------- 250 (344)
|++|+.||.|.|||+.+.+.............|.+++|+.. ...|++++.+|.+.+|
T Consensus 132 LASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~ 211 (1049)
T KOG0307|consen 132 LASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSV 211 (1049)
T ss_pred eeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceee
Confidence 99999999999999988654333322334567999999985 4566778888888888
Q ss_pred ---cCCC-CEEEEEeCCC---cEEEEeCCCCe-EEeeecccCCCccEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 251 ---SSDG-RIYCSGSKDG---DIKIWDGVSSK-CVATFSKAHDGAEISSLTFTRNG-KYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ---~~~~-~~l~~~~~dg---~i~iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
+|+. ..+++++.|. .|.+||+|.-. .++.+ .+|.. .|.++.|++.+ ++|++++.|+.|.+|+..+|+.+
T Consensus 212 l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~-~~H~~-GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl 289 (1049)
T KOG0307|consen 212 LAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKIL-EGHQR-GILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVL 289 (1049)
T ss_pred eeeCCCCceeeeeecCCCCCceeEeecccccCCchhhh-ccccc-ceeeeccCCCCchhhhcccCCCCeeEecCCCceEe
Confidence 3332 3455666553 59999988654 44444 35654 59999999965 89999999999999999999999
Q ss_pred EEeecCCCcCceeeeeeec
Q psy15157 322 IAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~ 340 (344)
..+... ..=++.+.|++
T Consensus 290 ~~~p~~--~nW~fdv~w~p 306 (1049)
T KOG0307|consen 290 GELPAQ--GNWCFDVQWCP 306 (1049)
T ss_pred eecCCC--CcceeeeeecC
Confidence 988763 23355555554
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-16 Score=139.33 Aligned_cols=187 Identities=19% Similarity=0.318 Sum_probs=156.0
Q ss_pred eeEEecC-CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSH-KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h-~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...++++ ...|.+++|++ +..|.+.+.+|+|.-||+.+ .+....+....+.|++++.+|.
T Consensus 61 ~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~------------------lk~~~~~d~~gg~IWsiai~p~ 121 (691)
T KOG2048|consen 61 EPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHT------------------LKQKYNIDSNGGAIWSIAINPE 121 (691)
T ss_pred eEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEeccc------------------CceeEEecCCCcceeEEEeCCc
Confidence 3345555 56799999995 55677888899999999954 4556677778899999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------- 251 (344)
+..++.|+.||.+..++...+............+.+.++.|+|++..++.|+.||.|++|+
T Consensus 122 ~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k 201 (691)
T KOG2048|consen 122 NTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSK 201 (691)
T ss_pred cceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeeccccccc
Confidence 9999999999988888888776655445555678999999999999999999999999992
Q ss_pred -----------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 252 -----------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 252 -----------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
-....+++|...|+|.+||...+..++.+.. |. +.|.+++..+++.+++++|.|+.|..+...+++
T Consensus 202 ~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~-h~-adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~ 278 (691)
T KOG2048|consen 202 REPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSC-HD-ADVLALAVADNEDRVFSAGVDPKIIQYSLTTNK 278 (691)
T ss_pred CCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhh-hh-cceeEEEEcCCCCeEEEccCCCceEEEEecCCc
Confidence 2345678999999999999999999988874 44 469999999999999999999999988887663
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-16 Score=136.31 Aligned_cols=192 Identities=23% Similarity=0.322 Sum_probs=143.6
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCC-CCCC-------------c---------CCCCCCceE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSME-SSEP-------------Q---------NDQQGHPVI 172 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~-~~~~-------------~---------~~~~~~~~~ 172 (344)
..|.+.|.+++.-.+|.+|- |+.|+.|..||-+- ....... +.+. . ...-.....
T Consensus 284 ~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y-~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~ 361 (626)
T KOG2106|consen 284 HAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNY-RKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFT 361 (626)
T ss_pred eecCCceEEEEEecCccEee-cCccceEEeccccc-cccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCce
Confidence 39999999999999997665 99999999999421 1110000 0000 0 000111223
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE---
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL--- 249 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--- 249 (344)
....+|....+.++.+|+.+++++++.|+.+++|+ ..+..... .-..++.|+.|+|.| .+++|+..|.-.+
T Consensus 362 ~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~---~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~ 435 (626)
T KOG2106|consen 362 LTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTK---IIEDPAECADFHPSG-VVAVGTATGRWFVLDT 435 (626)
T ss_pred EEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEE---EecCceeEeeccCcc-eEEEeeccceEEEEec
Confidence 45678999999999999999999999999999999 33333222 234678999999999 8999887776555
Q ss_pred -------------------EcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcE
Q psy15157 250 -------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310 (344)
Q Consensus 250 -------------------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i 310 (344)
|+|+|.+||.|+.|+.|++|-+............+.+++|+.+.|++|+++|.+-+-|-.|
T Consensus 436 e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~ei 515 (626)
T KOG2106|consen 436 ETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEI 515 (626)
T ss_pred ccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEE
Confidence 4899999999999999999998765443333334445899999999999999999999999
Q ss_pred EEEEc
Q psy15157 311 KLWEL 315 (344)
Q Consensus 311 ~vwd~ 315 (344)
..|..
T Consensus 516 LyW~~ 520 (626)
T KOG2106|consen 516 LYWKP 520 (626)
T ss_pred EEEcc
Confidence 99944
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-18 Score=155.35 Aligned_cols=200 Identities=18% Similarity=0.317 Sum_probs=157.7
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+.+|...|+|+.|...|.++++|+.|..|+||.+++ ..++..+.||.+.|+.++.+.+..+
T Consensus 185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et------------------~~~lAs~rGhs~ditdlavs~~n~~ 246 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMET------------------ARCLASCRGHSGDITDLAVSSNNTM 246 (1113)
T ss_pred HHHhhhhheeeeeeccccceEeecCccceeeeeeccc------------------hhhhccCCCCccccchhccchhhhh
Confidence 3569999999999999999999999999999999864 4556788999999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS---------------------- 251 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~---------------------- 251 (344)
+++++.|..|++|.+.++..+..+ .+|.+.|++++|+|-. +.+.||++++|+
T Consensus 247 iaaaS~D~vIrvWrl~~~~pvsvL--rghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~ 320 (1113)
T KOG0644|consen 247 IAAASNDKVIRVWRLPDGAPVSVL--RGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVD 320 (1113)
T ss_pred hhhcccCceEEEEecCCCchHHHH--hccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCccccccee
Confidence 999999999999999998765544 5789999999999943 678889999981
Q ss_pred -------------------------------CCC-----------CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccE
Q psy15157 252 -------------------------------SDG-----------RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEI 289 (344)
Q Consensus 252 -------------------------------~~~-----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 289 (344)
..+ .+.+++-.+..+.+|++.+|...+.+.. |. ..+
T Consensus 321 s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~g-hs-d~~ 398 (1113)
T KOG0644|consen 321 SILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMG-HS-DEV 398 (1113)
T ss_pred eeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcc-cc-cce
Confidence 111 2222333445677888888877776653 33 258
Q ss_pred EEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeecc
Q psy15157 290 SSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 290 ~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (344)
..+.++| |.+...+++.||.+.|||+-.|.+++.|.-. .+..+.-.|+.|
T Consensus 399 yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g--h~kl~d~kFSqd 449 (1113)
T KOG0644|consen 399 YVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG--HGKLVDGKFSQD 449 (1113)
T ss_pred eeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecc--cceeeccccCCC
Confidence 8899999 5566678999999999999999998887622 333444455544
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-16 Score=140.12 Aligned_cols=204 Identities=17% Similarity=0.248 Sum_probs=148.5
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCc-cccccCCCCC------C---------cCCCCCCce-EEE
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRM-LAKSSMESSE------P---------QNDQQGHPV-IRT 174 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~-~~~~~~~~~~------~---------~~~~~~~~~-~~~ 174 (344)
...+.+|++.|+|++|+.||+.+|+|+.|..|.+|...-. ....+..... + ..+..-+.. ...
T Consensus 46 lqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~ 125 (1081)
T KOG1538|consen 46 LQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKS 125 (1081)
T ss_pred ccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhh
Confidence 3467999999999999999999999999999999986421 0000000000 0 000000000 001
Q ss_pred ec--CCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC-----CCEEEEEeCCCEE
Q psy15157 175 LY--DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-----GDYMVVGTDHFVL 247 (344)
Q Consensus 175 ~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~~~~i 247 (344)
.. .....|.+++|..||++|+.|-.||+|.+-+-........-...+.+.+|++++|+|. ...+++.....++
T Consensus 126 V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTL 205 (1081)
T KOG1538|consen 126 VSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTL 205 (1081)
T ss_pred HHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEecccee
Confidence 11 1235688999999999999999999999987654433333344456789999999995 3578888888887
Q ss_pred EEE----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 248 RLY----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 248 ~~~----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
.+| -++|.+++.|+.|+.+++|- +.|-.+.++.. .+.+|+.++..|++++++.|+
T Consensus 206 SFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~--~D~WIWtV~~~PNsQ~v~~GC 282 (1081)
T KOG1538|consen 206 SFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGE--QDSWIWTVQAKPNSQYVVVGC 282 (1081)
T ss_pred EEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccc--cceeEEEEEEccCCceEEEEE
Confidence 776 57899999999999999997 55666666643 346899999999999999999
Q ss_pred CCCcEEEEEcCCC
Q psy15157 306 KDSLVKLWELSSA 318 (344)
Q Consensus 306 ~dg~i~vwd~~~~ 318 (344)
.||+|-.|++...
T Consensus 283 qDGTiACyNl~fS 295 (1081)
T KOG1538|consen 283 QDGTIACYNLIFS 295 (1081)
T ss_pred ccCeeehhhhHHh
Confidence 9999999998643
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-15 Score=131.53 Aligned_cols=184 Identities=14% Similarity=0.178 Sum_probs=134.5
Q ss_pred eEEEEECCCCCEEEE-EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 122 CRAGAFSIDGQLCAT-GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 122 v~~~~~s~~~~~l~s-g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
+..++|+|+++.+++ ++.|+.|++||+.+ ...+..+. +...+.+++|+|++.++++++.+
T Consensus 75 ~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~------------------~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~ 135 (300)
T TIGR03866 75 PELFALHPNGKILYIANEDDNLVTVIDIET------------------RKVLAEIP-VGVEPEGMAVSPDGKIVVNTSET 135 (300)
T ss_pred ccEEEECCCCCEEEEEcCCCCeEEEEECCC------------------CeEEeEee-CCCCcceEEECCCCCEEEEEecC
Confidence 577899999997655 45689999999963 22233332 22346789999999999988877
Q ss_pred C-cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------------------
Q psy15157 201 K-TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------------------- 250 (344)
Q Consensus 201 g-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------------------- 250 (344)
+ .+.+||..+++..... .....+.+++|+|+|.++++++ .++.+.+|
T Consensus 136 ~~~~~~~d~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i 212 (300)
T TIGR03866 136 TNMAHFIDTKTYEIVDNV---LVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGI 212 (300)
T ss_pred CCeEEEEeCCCCeEEEEE---EcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccce
Confidence 5 4677898776543222 1233457789999999886554 57777776
Q ss_pred --cCCCCEEEE-EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 --SSDGRIYCS-GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 --~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+++++++++ .+.++.|.+||.++++.+..+... ..+.+++|+|+|++|+++ +.+|.|++||+++++++..++.
T Consensus 213 ~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~ 289 (300)
T TIGR03866 213 KLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVG---QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV 289 (300)
T ss_pred EECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeC---CCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc
Confidence 355666443 445678999999988877655322 258899999999999886 5689999999999999999986
Q ss_pred CCCc
Q psy15157 327 AGSM 330 (344)
Q Consensus 327 ~~~~ 330 (344)
...+
T Consensus 290 ~~~~ 293 (300)
T TIGR03866 290 GRLP 293 (300)
T ss_pred cccc
Confidence 5443
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.5e-17 Score=144.39 Aligned_cols=178 Identities=24% Similarity=0.394 Sum_probs=148.4
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
...+++++.++.|++.+.|+..|+|-+|++.++.....+ ..-..|.++|++++...-++.++|++
T Consensus 448 ~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf---------------~~~~ah~~~V~gla~D~~n~~~vsa~ 512 (910)
T KOG1539|consen 448 DINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSF---------------GDSPAHKGEVTGLAVDGTNRLLVSAG 512 (910)
T ss_pred CcceEEEEEeccCceEEEeccCCeEEEEEcccCeeeccc---------------ccCccccCceeEEEecCCCceEEEcc
Confidence 378999999999999999999999999999764332211 01247999999999999999999999
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCC
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGR 255 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~ 255 (344)
.+|.+++||..+...+... .-...+.++.++.....++++.++-.|+++ +|+|+
T Consensus 513 ~~Gilkfw~f~~k~l~~~l---~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~Dgr 589 (910)
T KOG1539|consen 513 ADGILKFWDFKKKVLKKSL---RLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGR 589 (910)
T ss_pred CcceEEEEecCCcceeeee---ccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCc
Confidence 9999999999887543333 235567888888888888888888888875 89999
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-CcEEEEEcCC
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-SLVKLWELSS 317 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-g~i~vwd~~~ 317 (344)
++++++.|++|++||+.++.++-.+.. ..+..++.|+|+|.+|+|...| .-|++|-=++
T Consensus 590 WlisasmD~tIr~wDlpt~~lID~~~v---d~~~~sls~SPngD~LAT~Hvd~~gIylWsNks 649 (910)
T KOG1539|consen 590 WLISASMDSTIRTWDLPTGTLIDGLLV---DSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKS 649 (910)
T ss_pred EEEEeecCCcEEEEeccCcceeeeEec---CCcceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence 999999999999999999999877752 2468999999999999999888 5699996544
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-16 Score=128.10 Aligned_cols=188 Identities=16% Similarity=0.276 Sum_probs=159.6
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+.--..+|+|.+|++|+..+|.+-....|.||.... ...++...++..|...|++++|+|..+.|
T Consensus 6 ~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~---------------~~~w~~~htls~Hd~~vtgvdWap~snrI 70 (361)
T KOG1523|consen 6 FHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLG---------------ADLWEPAHTLSEHDKIVTGVDWAPKSNRI 70 (361)
T ss_pred eeeccCceeeeeecCCCceEEeccCCceEEEEEecC---------------CCCceeceehhhhCcceeEEeecCCCCce
Confidence 333467999999999999999999999999999863 13367789999999999999999999999
Q ss_pred EEEeCCCcEEEEEc-CCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------
Q psy15157 195 ASGSKDKTVKMFDY-SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------- 250 (344)
++|+.|..-++|.. ..++.........++...+++.|+|.++.|++|+....|.+|
T Consensus 71 vtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~ 150 (361)
T KOG1523|consen 71 VTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVT 150 (361)
T ss_pred eEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCcccccee
Confidence 99999999999999 666667777777888999999999999999999999998885
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCC------------------CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVS------------------SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
.|++-++++|+.|+..+||..-- |..+..+. ..++.+..+.|+|+|..|+-.+.|+
T Consensus 151 sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~--~~ggwvh~v~fs~sG~~lawv~Hds 228 (361)
T KOG1523|consen 151 SLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS--SSGGWVHGVLFSPSGNRLAWVGHDS 228 (361)
T ss_pred eeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc--cCCCceeeeEeCCCCCEeeEecCCC
Confidence 78999999999999999997321 11122221 3456899999999999999999999
Q ss_pred cEEEEEcCCCe
Q psy15157 309 LVKLWELSSAR 319 (344)
Q Consensus 309 ~i~vwd~~~~~ 319 (344)
.+.+=|.....
T Consensus 229 ~v~~~da~~p~ 239 (361)
T KOG1523|consen 229 TVSFVDAAGPS 239 (361)
T ss_pred ceEEeecCCCc
Confidence 99999987664
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-17 Score=140.33 Aligned_cols=196 Identities=24% Similarity=0.308 Sum_probs=148.5
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--C
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS--A 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~ 191 (344)
.|.||++.|+|+.|+.+|.+|++||.|-.+.|||.-. .......-.+|.+.|.++.|-|. .
T Consensus 45 eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~-----------------~KllhsI~TgHtaNIFsvKFvP~tnn 107 (758)
T KOG1310|consen 45 ELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFE-----------------YKLLHSISTGHTANIFSVKFVPYTNN 107 (758)
T ss_pred hhccccceecceeecCCCCEEeecCCcceEEeecchh-----------------cceeeeeecccccceeEEeeeccCCC
Confidence 4789999999999999999999999999999999842 12223344689999999999994 4
Q ss_pred CEEEEEeCCCcEEEEEcCCCc--------cccceeeeccccceEEEEEecCC-CEEEEEeCCCEEEEE------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSS--------VRKAHKTIQESTFVRCLSFHPCG-DYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~~------------ 250 (344)
.+++||..|..|+++|+...+ .........|...|..++-.|++ ..+.+++.||+++-+
T Consensus 108 riv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~ 187 (758)
T KOG1310|consen 108 RIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDE 187 (758)
T ss_pred eEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccc
Confidence 599999999999999998521 11222334467778889999988 788999999999987
Q ss_pred ----------------------cCCCCEEEEEeCCCcEEEEeCCCC--------e----------EEeeecccCC----C
Q psy15157 251 ----------------------SSDGRIYCSGSKDGDIKIWDGVSS--------K----------CVATFSKAHD----G 286 (344)
Q Consensus 251 ----------------------~~~~~~l~~~~~dg~i~iwd~~~~--------~----------~~~~~~~~~~----~ 286 (344)
..+..+|++|+.|-..++||.+.. . ++.-+...|- +
T Consensus 188 ~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~g 267 (758)
T KOG1310|consen 188 DCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQG 267 (758)
T ss_pred cccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCccc
Confidence 235678999999999999994321 1 2222222221 0
Q ss_pred ---c---cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 287 ---A---EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 287 ---~---~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
. -++-++|+|+|.-|+..=..-.|+++|+..++....|..
T Consensus 268 n~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~~y~~ 313 (758)
T KOG1310|consen 268 NLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSPTPYFL 313 (758)
T ss_pred ccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCceeecC
Confidence 1 156778999999888776667899999998887666543
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-17 Score=131.47 Aligned_cols=170 Identities=20% Similarity=0.333 Sum_probs=111.2
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc--ceeeeccccceEEEEEecCCC--------------
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGD-------------- 236 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-------------- 236 (344)
..+++|.+.|++++|+.||+.|+|++.|++|++|++++..... .++..-.....+.+.|.||.+
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~v 159 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCV 159 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEE
Confidence 4688999999999999999999999999999999987643211 111111112234455555544
Q ss_pred -----------------------------------------EEEEEeCCCEEEEE----------------------cCC
Q psy15157 237 -----------------------------------------YMVVGTDHFVLRLY----------------------SSD 253 (344)
Q Consensus 237 -----------------------------------------~l~~~~~~~~i~~~----------------------~~~ 253 (344)
+|.+++.|..|.+| +|+
T Consensus 160 yk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP~ 239 (420)
T KOG2096|consen 160 YKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSPD 239 (420)
T ss_pred EEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCCC
Confidence 44444444444444 566
Q ss_pred CCEEEEEeCCCcEEEEeCCC---C-----eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC-------C
Q psy15157 254 GRIYCSGSKDGDIKIWDGVS---S-----KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS-------A 318 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~---~-----~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~-------~ 318 (344)
|+++++++..-.+++|..-- | ..+..+. +|. +.|..++|+++.+.+++.+.||++++||+.- .
T Consensus 240 GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~Lk-GH~-saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDp 317 (420)
T KOG2096|consen 240 GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLK-GHQ-SAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDP 317 (420)
T ss_pred CcEEEEecCCCCceEEEEEeccCcchhhhhhhheec-cch-hheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCc
Confidence 77777766666677776421 1 1122333 444 4699999999999999999999999999852 2
Q ss_pred eeEEEe--ecCCCcCceeeeeeeccCCC
Q psy15157 319 RCLIAY--TGAGSMGQQFELTLTVDADV 344 (344)
Q Consensus 319 ~~~~~~--~~~~~~~~~~~~~~~~~~~~ 344 (344)
+.++++ ..|.+.+....+.++|++++
T Consensus 318 k~Lk~g~~pl~aag~~p~RL~lsP~g~~ 345 (420)
T KOG2096|consen 318 KILKEGSAPLHAAGSEPVRLELSPSGDS 345 (420)
T ss_pred hHhhcCCcchhhcCCCceEEEeCCCCcE
Confidence 344444 23444555567777777653
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.5e-17 Score=128.22 Aligned_cols=183 Identities=17% Similarity=0.283 Sum_probs=139.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~ 189 (344)
+...+++|.+.|+++.|..+++ |.+|..-|.|++|++.+ ......++ .|...|+.+.--|
T Consensus 6 P~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt------------------~r~~~~~r~~g~~~it~lq~~p 66 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQT------------------ERDLPLIRLFGRLFITNLQSIP 66 (323)
T ss_pred CeeEeccccchheehhhccchh-hhcccccceEEEEEeec------------------CccchhhhhhccceeeceeecC
Confidence 3456789999999999987665 88999999999999954 23344455 5677888888888
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcccccee---------------------------------------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHK--------------------------------------------------- 218 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------------------------------- 218 (344)
+ ..+.+-+.|+.+.+|++..+.......
T Consensus 67 ~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~ 145 (323)
T KOG0322|consen 67 N-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDS 145 (323)
T ss_pred C-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCch
Confidence 7 467788999999999976532111000
Q ss_pred eeccccceEEEEEec-CCC--EEEEEeCCCEEEEE---------------------------------------------
Q psy15157 219 TIQESTFVRCLSFHP-CGD--YMVVGTDHFVLRLY--------------------------------------------- 250 (344)
Q Consensus 219 ~~~~~~~v~~~~~~~-~~~--~l~~~~~~~~i~~~--------------------------------------------- 250 (344)
.....+.+.|..+.- ++. ++++|..+|.+.+|
T Consensus 146 ~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga 225 (323)
T KOG0322|consen 146 ERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGA 225 (323)
T ss_pred hccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCc
Confidence 000122344444322 333 45678889999998
Q ss_pred ----------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc
Q psy15157 251 ----------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296 (344)
Q Consensus 251 ----------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~ 296 (344)
.||++++|+++.|+.||||..++..++..+. .|. +.|++++|+|
T Consensus 226 ~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLk-yHs-agvn~vAfsp 303 (323)
T KOG0322|consen 226 DDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLK-YHS-AGVNAVAFSP 303 (323)
T ss_pred cccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhh-hhh-cceeEEEeCC
Confidence 5899999999999999999999999998887 555 4699999999
Q ss_pred CCCEEEEEeCCCcEEEEEc
Q psy15157 297 NGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 297 ~~~~l~s~~~dg~i~vwd~ 315 (344)
+...+++++.|+.|.+|++
T Consensus 304 d~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 304 DCELMAAASKDARISLWKL 322 (323)
T ss_pred CCchhhhccCCceEEeeec
Confidence 9999999999999999986
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=131.37 Aligned_cols=214 Identities=19% Similarity=0.246 Sum_probs=156.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~ 190 (344)
..-+.+|.+.|+++.||.++++|++|+.|..+++|+++..... ...+++... ..|...|.|++|...
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~------------k~~KPI~~~~~~H~SNIF~L~F~~~ 116 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVR------------KTPKPIGVMEHPHRSNIFSLEFDLE 116 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhh------------cCCCCceeccCccccceEEEEEccC
Confidence 3346799999999999999999999999999999999743221 122333333 346689999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------- 251 (344)
..++++|..+++|...|+.+.+.+..+......+.|+.+..+|..+.+++.+.++.+.+|+
T Consensus 117 N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~ 196 (609)
T KOG4227|consen 117 NRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKN 196 (609)
T ss_pred CeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCcc
Confidence 9999999999999999999986655554444455899999999999999999999999991
Q ss_pred --------CCCCEEEEEeCCCcEEEEeCCCCeE-----------------------------E-----------------
Q psy15157 252 --------SDGRIYCSGSKDGDIKIWDGVSSKC-----------------------------V----------------- 277 (344)
Q Consensus 252 --------~~~~~l~~~~~dg~i~iwd~~~~~~-----------------------------~----------------- 277 (344)
....++++.+..+-+-+||.+.... .
T Consensus 197 F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~ 276 (609)
T KOG4227|consen 197 FYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQ 276 (609)
T ss_pred ceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecc
Confidence 1235667777777788888543110 0
Q ss_pred --eeecccCC------CccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC-----------------------eeEEEeec
Q psy15157 278 --ATFSKAHD------GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-----------------------RCLIAYTG 326 (344)
Q Consensus 278 --~~~~~~~~------~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-----------------------~~~~~~~~ 326 (344)
..++..|. ...+.+++|..| .-+++|+++-.|++|.+... +.+..++|
T Consensus 277 R~~V~k~D~N~~GY~N~~T~KS~~F~~D-~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrG 355 (609)
T KOG4227|consen 277 RCFVLKSDHNPNGYCNIKTIKSMTFIDD-YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRG 355 (609)
T ss_pred cceeEeccCCCCcceeeeeeeeeeeecc-eeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEec
Confidence 00111111 123666777644 34899999999999988531 24567889
Q ss_pred CCCcCceeeeee
Q psy15157 327 AGSMGQQFELTL 338 (344)
Q Consensus 327 ~~~~~~~~~~~~ 338 (344)
|.+...++.|..
T Consensus 356 HRSv~NQVRF~~ 367 (609)
T KOG4227|consen 356 HRSVPNQVRFSQ 367 (609)
T ss_pred ccccccceeecC
Confidence 988888877653
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=129.48 Aligned_cols=207 Identities=18% Similarity=0.248 Sum_probs=153.2
Q ss_pred cCCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-
Q psy15157 117 SHKSPCRAGAFSID----GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA- 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~----~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 191 (344)
.|...-..++|+-+ ..++|.|+.-|.|+|.|+.+ .+....+.+|...|+.+.++|+.
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~------------------~~~~~~~~ghG~sINeik~~p~~~ 148 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVS------------------GQCSKNYRGHGGSINEIKFHPDRP 148 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecch------------------hhhccceeccCccchhhhcCCCCC
Confidence 47777888888753 34899999999999999964 45566788999999999999976
Q ss_pred CEEEEEeCCCcEEEEEcCCCcccccee-eeccccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHK-TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------- 251 (344)
+++++||.|.+|++|++++..+...+. ..+|...|.++.|+++|.+|++++-|..+.+|.
T Consensus 149 qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~ 228 (385)
T KOG1034|consen 149 QLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPN 228 (385)
T ss_pred cEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCC
Confidence 589999999999999999987766554 245788999999999999999999999999990
Q ss_pred -------------C-----------------CCCEEEEEeCCCcEEEEeC-CCCeE-------------EeeecccCCCc
Q psy15157 252 -------------S-----------------DGRIYCSGSKDGDIKIWDG-VSSKC-------------VATFSKAHDGA 287 (344)
Q Consensus 252 -------------~-----------------~~~~l~~~~~dg~i~iwd~-~~~~~-------------~~~~~~~~~~~ 287 (344)
| -|.++++-|-++.|..|.. +-++. +..+.-.....
T Consensus 229 ~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~i 308 (385)
T KOG1034|consen 229 KTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDI 308 (385)
T ss_pred CccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccce
Confidence 1 2567888888999999986 22222 11221111111
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee--EEEeecCCCcCceeeeeeecc
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARC--LIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 341 (344)
+....+|+|-++.|+.|...|.|++||++..++ ..++..+.+....-.++|+-|
T Consensus 309 Wfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~d 364 (385)
T KOG1034|consen 309 WFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRD 364 (385)
T ss_pred EEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeeccc
Confidence 233345677789999999999999999998765 334444433333334444444
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.2e-17 Score=142.06 Aligned_cols=185 Identities=19% Similarity=0.317 Sum_probs=144.3
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCC-----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDA-----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 186 (344)
+..+-||.-.|.|++.+|+|+++||+.... -|++|+..+ +.....+.+|.-.|+.++
T Consensus 518 v~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~------------------W~~~~~L~~HsLTVT~l~ 579 (764)
T KOG1063|consen 518 VHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN------------------WLQVQELEGHSLTVTRLA 579 (764)
T ss_pred hHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc------------------hhhhheecccceEEEEEE
Confidence 344679999999999999999999998754 488999843 555667899999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCcccccee---eeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------
Q psy15157 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHK---TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------- 250 (344)
Q Consensus 187 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------- 250 (344)
|+||+++|++.+.|+++.+|....... ..+. ...|..-|++..|+|++.++++++.|..+.+|
T Consensus 580 FSpdg~~LLsvsRDRt~sl~~~~~~~~-~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~ 658 (764)
T KOG1063|consen 580 FSPDGRYLLSVSRDRTVSLYEVQEDIK-DEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRF 658 (764)
T ss_pred ECCCCcEEEEeecCceEEeeeeecccc-hhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhh
Confidence 999999999999999999999754321 1122 34577889999999999999999999999999
Q ss_pred -------------------cCCCCEEEEEeCCCcEEEEeCCC-------CeEEee--e--cccCCCccEEEEEEccC---
Q psy15157 251 -------------------SSDGRIYCSGSKDGDIKIWDGVS-------SKCVAT--F--SKAHDGAEISSLTFTRN--- 297 (344)
Q Consensus 251 -------------------~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~--~--~~~~~~~~v~~i~~~~~--- 297 (344)
...+..++.|-..|.|.+|.... +..... . ...+. ..|+.+.|.|.
T Consensus 659 a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~aV~rl~w~p~~~~ 737 (764)
T KOG1063|consen 659 ACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPD-SAVNRLLWRPTCSD 737 (764)
T ss_pred chhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChH-HhhheeEecccccc
Confidence 12344788899999999999551 111110 0 01222 45999999975
Q ss_pred -------CCEEEEEeCCCcEEEEEcC
Q psy15157 298 -------GKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 298 -------~~~l~s~~~dg~i~vwd~~ 316 (344)
...|++|++|..++++++.
T Consensus 738 ~~~~~~~~l~la~~g~D~~vri~nv~ 763 (764)
T KOG1063|consen 738 DWVEDKEWLNLAVGGDDESVRIFNVD 763 (764)
T ss_pred ccccccceeEEeeecccceeEEeecc
Confidence 2347999999999999874
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-16 Score=137.07 Aligned_cols=215 Identities=20% Similarity=0.266 Sum_probs=159.1
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC-----------------------------
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE----------------------------- 161 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~----------------------------- 161 (344)
....+.||++.|+|+...|.|.+|++|+.||+|+||.+.++.+........
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp 471 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP 471 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence 345678999999999999999999999999999999997654321111000
Q ss_pred ---------------------C-------cCCCC----CCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC---CcEEEE
Q psy15157 162 ---------------------P-------QNDQQ----GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD---KTVKMF 206 (344)
Q Consensus 162 ---------------------~-------~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iw 206 (344)
. .+... ...-+...-.|...|..+.||..|.+|++...+ ..|.|.
T Consensus 472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliH 551 (733)
T KOG0650|consen 472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIH 551 (733)
T ss_pred cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEE
Confidence 0 00000 011133445688899999999999999987653 669999
Q ss_pred EcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCC
Q psy15157 207 DYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKD 263 (344)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~d 263 (344)
++...+....+. ...+.+.++.|+|...++++++.. .+++| +|.|.-|+.|+.|
T Consensus 552 QLSK~~sQ~PF~--kskG~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d 628 (733)
T KOG0650|consen 552 QLSKRKSQSPFR--KSKGLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYD 628 (733)
T ss_pred ecccccccCchh--hcCCceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCC
Confidence 998775543332 345679999999999999988754 45665 7899999999999
Q ss_pred CcEEEEeCCCC-eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC------CC---eeEEEeecCCCc
Q psy15157 264 GDIKIWDGVSS-KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS------SA---RCLIAYTGAGSM 330 (344)
Q Consensus 264 g~i~iwd~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~------~~---~~~~~~~~~~~~ 330 (344)
+.+..||+.-. ++.+++. .|. ..+++++|++.-.++++|++||++.|+.-. .. -++..++||...
T Consensus 629 ~k~~WfDldlsskPyk~lr-~H~-~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~ 703 (733)
T KOG0650|consen 629 KKMCWFDLDLSSKPYKTLR-LHE-KAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKT 703 (733)
T ss_pred CeeEEEEcccCcchhHHhh-hhh-hhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceee
Confidence 99999999865 4445554 555 469999999999999999999999988432 22 246677787544
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.8e-17 Score=134.74 Aligned_cols=194 Identities=19% Similarity=0.281 Sum_probs=138.5
Q ss_pred ceEEEEECC-------CCCEEEEEeCCCeEEEEEcCCccccccCC--C-CCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 121 PCRAGAFSI-------DGQLCATGSVDASIKILDVDRMLAKSSME--S-SEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 121 ~v~~~~~s~-------~~~~l~sg~~dg~v~iwd~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...|++|.. -|+|+|.|..|..|.|||+.-........ . ...+.....++.-....+|+..|.+++|+..
T Consensus 175 fPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~ 254 (463)
T KOG0270|consen 175 FPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRN 254 (463)
T ss_pred cchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccc
Confidence 346666642 36799999999999999996321111000 0 0000000111112234579999999999886
Q ss_pred C-CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 191 A-PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 191 ~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw 269 (344)
- +.|+|||.|.+|++||+.++++...+. .|...|.++.|+|. ...++++|+.|+++.+.
T Consensus 255 ~~nVLaSgsaD~TV~lWD~~~g~p~~s~~--~~~k~Vq~l~wh~~------------------~p~~LLsGs~D~~V~l~ 314 (463)
T KOG0270|consen 255 FRNVLASGSADKTVKLWDVDTGKPKSSIT--HHGKKVQTLEWHPY------------------EPSVLLSGSYDGTVALK 314 (463)
T ss_pred cceeEEecCCCceEEEEEcCCCCcceehh--hcCCceeEEEecCC------------------CceEEEeccccceEEee
Confidence 5 489999999999999999998765554 57889999999995 45566699999999999
Q ss_pred eCCCCeEE-eeecccCCCccEEEEEEccCCC-EEEEEeCCCcEEEEEcCCC-eeEEEeecCCCcCceeeee
Q psy15157 270 DGVSSKCV-ATFSKAHDGAEISSLTFTRNGK-YLLSSGKDSLVKLWELSSA-RCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 270 d~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~ 337 (344)
|.+..... ..++ . .+.|-.++|+|... .++++.+||+|+-+|+|+. +++.+++.|....+.+++.
T Consensus 315 D~R~~~~s~~~wk-~--~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n 382 (463)
T KOG0270|consen 315 DCRDPSNSGKEWK-F--DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVN 382 (463)
T ss_pred eccCccccCceEE-e--ccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEec
Confidence 99953222 2222 1 24689999999554 5777889999999999985 9999999998877766654
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=125.30 Aligned_cols=167 Identities=22% Similarity=0.288 Sum_probs=127.9
Q ss_pred ecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-E
Q psy15157 116 TSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-I 193 (344)
Q Consensus 116 ~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 193 (344)
..+..++++..|+. +-+++.+.|-|.++.|||++++ ..+.....+-.|..+|.+++|...+. .
T Consensus 147 s~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~---------------~~~~vkTQLIAHDKEV~DIaf~~~s~~~ 211 (364)
T KOG0290|consen 147 SEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETG---------------VSGTVKTQLIAHDKEVYDIAFLKGSRDV 211 (364)
T ss_pred cccCCcccccccccCCcceeEeecccCeEEEEEEeec---------------cccceeeEEEecCcceeEEEeccCccce
Confidence 46778999999987 7789999999999999999753 12334556778999999999998664 8
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeecc-ccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC-CcEEEEeC
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQE-STFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKD-GDIKIWDG 271 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~d-g~i~iwd~ 271 (344)
|+|++.||+||+||++....-..+-.... ..+...++|+++ +-+++|+-..| ..|.|.|+
T Consensus 212 FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkq------------------DpnymATf~~dS~~V~iLDi 273 (364)
T KOG0290|consen 212 FASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQ------------------DPNYMATFAMDSNKVVILDI 273 (364)
T ss_pred EEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcC------------------CchHHhhhhcCCceEEEEEe
Confidence 99999999999999998654333322222 556778888874 33444444433 46999999
Q ss_pred CCC-eEEeeecccCCCccEEEEEEccC-CCEEEEEeCCCcEEEEEcCC
Q psy15157 272 VSS-KCVATFSKAHDGAEISSLTFTRN-GKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 272 ~~~-~~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~~ 317 (344)
+.. ..+..+. .|. +.|++|+|.|. ...|.++|+|..+.+||+.+
T Consensus 274 R~P~tpva~L~-~H~-a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 274 RVPCTPVARLR-NHQ-ASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred cCCCcceehhh-cCc-ccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 875 4566665 454 57999999994 56799999999999999965
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.8e-16 Score=120.69 Aligned_cols=175 Identities=19% Similarity=0.237 Sum_probs=127.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.|..-+++|.+++|+.|+.+|.|.++.+++...... ...+...+...++|.++|..++|+ ..+|++|+ |
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa--------~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-d 80 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSA--------EPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-D 80 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhcccc--------CCCCCcceeeccccCCCeeeeeee--hhheeecc-C
Confidence 355567899999999999999999999975432221 123344566779999999999999 34777777 5
Q ss_pred CcEEEEEcCCCcc----cc--ceeeec-----cccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 201 KTVKMFDYSKSSV----RK--AHKTIQ-----ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 201 g~i~iwd~~~~~~----~~--~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw 269 (344)
|.|+=|..+.... +. ...... .-..|+++...|..+ -++.++.|+.++-|
T Consensus 81 G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~en-------------------Si~~AgGD~~~y~~ 141 (325)
T KOG0649|consen 81 GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSEN-------------------SILFAGGDGVIYQV 141 (325)
T ss_pred ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCC-------------------cEEEecCCeEEEEE
Confidence 9999998765321 00 011111 123466677766433 33355689999999
Q ss_pred eCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 270 DGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
|+++|+....++ +|.+ .|.++.--.....+++|++||++|+||+++++++..+...
T Consensus 142 dlE~G~i~r~~r-GHtD-YvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~y 197 (325)
T KOG0649|consen 142 DLEDGRIQREYR-GHTD-YVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPY 197 (325)
T ss_pred EecCCEEEEEEc-CCcc-eeeeeeecccCcceeecCCCccEEEEeccccceeEEeccc
Confidence 999999999998 5553 6999987555566999999999999999999998887654
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-15 Score=119.47 Aligned_cols=160 Identities=18% Similarity=0.367 Sum_probs=111.0
Q ss_pred EEEEECCCCCEEEEEeC----------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCC
Q psy15157 123 RAGAFSIDGQLCATGSV----------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSA 191 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~ 191 (344)
-.+.|+++|++|+.-.. -|...+|.++. . ......+. ...++|.+++|+|++
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~----------------~-~~~~~~i~l~~~~~I~~~~WsP~g 71 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNE----------------K-NIPVESIELKKEGPIHDVAWSPNG 71 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEec----------------C-CCccceeeccCCCceEEEEECcCC
Confidence 35678999987665332 23455665532 1 11122222 234579999999999
Q ss_pred CEEEE--EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 192 PILAS--GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 192 ~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw 269 (344)
..|+. |..++.|.+||++. +.. ... ....+..+.|+|+|+++++++ .+...|.|.+|
T Consensus 72 ~~favi~g~~~~~v~lyd~~~-~~i--~~~--~~~~~n~i~wsP~G~~l~~~g----------------~~n~~G~l~~w 130 (194)
T PF08662_consen 72 NEFAVIYGSMPAKVTLYDVKG-KKI--FSF--GTQPRNTISWSPDGRFLVLAG----------------FGNLNGDLEFW 130 (194)
T ss_pred CEEEEEEccCCcccEEEcCcc-cEe--Eee--cCCCceEEEECCCCCEEEEEE----------------ccCCCcEEEEE
Confidence 97654 44678999999962 222 222 245678899999888888754 23456789999
Q ss_pred eCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC------CCcEEEEEcCCCeeEEEee
Q psy15157 270 DGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK------DSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~ 325 (344)
|.++.+.+.... +. .++.++|+|||++|++++. |+.++||++ .|+.+....
T Consensus 131 d~~~~~~i~~~~--~~--~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~~ 187 (194)
T PF08662_consen 131 DVRKKKKISTFE--HS--DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKKP 187 (194)
T ss_pred ECCCCEEeeccc--cC--cEEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEecc
Confidence 999988887764 32 3789999999999999864 788999999 577776654
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=138.32 Aligned_cols=154 Identities=19% Similarity=0.286 Sum_probs=119.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.|+.++|-|||..|+.+. +..+.+||.+. +..+.++++|.+.|.|++|+.+|+.++||+.|
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~nd------------------G~llqtLKgHKDtVycVAys~dGkrFASG~aD 74 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSD------------------GTLLQPLKGHKDTVYCVAYAKDGKRFASGSAD 74 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCC------------------cccccccccccceEEEEEEccCCceeccCCCc
Confidence 899999999999887774 55799999853 56788999999999999999999999999999
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCE--------------------EEEEcCCCCEEEEE
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV--------------------LRLYSSDGRIYCSG 260 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--------------------i~~~~~~~~~l~~~ 260 (344)
..|.+|.-.-. ...+ ..|...|.|+.|+|....+++|+-+.. ..-|..||.+++.|
T Consensus 75 K~VI~W~~klE---G~Lk-YSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG 150 (1081)
T KOG1538|consen 75 KSVIIWTSKLE---GILK-YSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALG 150 (1081)
T ss_pred eeEEEeccccc---ceee-eccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEe
Confidence 99999985432 2233 468899999999999999988763211 12378999999999
Q ss_pred eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC
Q psy15157 261 SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN 297 (344)
Q Consensus 261 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 297 (344)
-.+|+|.+-+....+.+..-..+..+.+|.+++|+|.
T Consensus 151 ~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~ 187 (1081)
T KOG1538|consen 151 MFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPS 187 (1081)
T ss_pred ccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCC
Confidence 9999999987443333332222334457888888774
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-16 Score=131.85 Aligned_cols=174 Identities=19% Similarity=0.296 Sum_probs=132.2
Q ss_pred CCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 119 KSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 119 ~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
..+|..+.|.++.. .+|||+.|..|+||.+++...... ...-.....+..|...|+++.|+|+|.+|+||
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~---------~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg 83 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGG---------DMKVEYLSSLSRHTRAVNVVRFSPDGELLASG 83 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCC---------ceeEEEeecccCCcceeEEEEEcCCcCeeeec
Confidence 46899999998766 999999999999999975321110 01234567788999999999999999999999
Q ss_pred eCCCcEEEEEcCCCc--------------cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC
Q psy15157 198 SKDKTVKMFDYSKSS--------------VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKD 263 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~d 263 (344)
+.+|.|.+|-...-. .........|...+..++|+| ++.++++++.|
T Consensus 84 ~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~-------------------d~~~l~s~s~d 144 (434)
T KOG1009|consen 84 GDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP-------------------DSNFLVSGSVD 144 (434)
T ss_pred CCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC-------------------CCceeeeeecc
Confidence 999999999866211 111112223445566666666 55666689999
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
..+++||+..|.....+. .|. ..+..++|+|-++++++-+.|...+.+.+...+.++
T Consensus 145 ns~~l~Dv~~G~l~~~~~-dh~-~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~ 201 (434)
T KOG1009|consen 145 NSVRLWDVHAGQLLAILD-DHE-HYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIK 201 (434)
T ss_pred ceEEEEEeccceeEeecc-ccc-cccceeecchhhhhhhhhccCcccceeeeeeeeeee
Confidence 999999999999988876 343 469999999999999999999988888876654433
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-15 Score=123.42 Aligned_cols=213 Identities=18% Similarity=0.297 Sum_probs=156.9
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEc-------CCCCE
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFH-------PSAPI 193 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-------~~~~~ 193 (344)
...+.|||||..+++-+.|..+++|++........... ....+....++ .....|...+|. |+..+
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~------~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l 125 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADG------PLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNL 125 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCC------ccccccceeEEeccCCEEEEEEeeeccccCCCccce
Confidence 45578999999999999999999999964222111000 00011111111 234567788886 46679
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeecccc---ceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQEST---FVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++.+.|.-|++||.-+++....+....|.. ...+++|+|||.+|++|. +..|++|
T Consensus 126 ~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~ 204 (406)
T KOG2919|consen 126 FAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKF 204 (406)
T ss_pred eeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccc
Confidence 9999999999999999998877766554433 346799999999998765 4566776
Q ss_pred -----------cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy15157 251 -----------SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSS 317 (344)
Q Consensus 251 -----------~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~ 317 (344)
+| +...++.|+....+-||.-..+.++..+- +|.+ .|+.+.|.++|+.|++|. .|..|..||+|.
T Consensus 205 gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llg-gh~g-GvThL~~~edGn~lfsGaRk~dkIl~WDiR~ 282 (406)
T KOG2919|consen 205 GQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLG-GHGG-GVTHLQWCEDGNKLFSGARKDDKILCWDIRY 282 (406)
T ss_pred cccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeec-ccCC-CeeeEEeccCcCeecccccCCCeEEEEeehh
Confidence 33 44588899999999999888888887775 5554 599999999999999987 578899999987
Q ss_pred -CeeEEEeecCCC-cCceeeeeeeccCC
Q psy15157 318 -ARCLIAYTGAGS-MGQQFELTLTVDAD 343 (344)
Q Consensus 318 -~~~~~~~~~~~~-~~~~~~~~~~~~~~ 343 (344)
+.++..+..|.. .++.+-|...+.++
T Consensus 283 ~~~pv~~L~rhv~~TNQRI~FDld~~~~ 310 (406)
T KOG2919|consen 283 SRDPVYALERHVGDTNQRILFDLDPKGE 310 (406)
T ss_pred ccchhhhhhhhccCccceEEEecCCCCc
Confidence 567888888866 66777776666554
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=148.71 Aligned_cols=189 Identities=20% Similarity=0.306 Sum_probs=146.2
Q ss_pred eEEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
.....|++.|..+.|++.. ++||+|+.||.|.|||+++....... .-....+.|.+++|+..-
T Consensus 110 a~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~----------------~~~~~~~eI~~lsWNrkv 173 (1049)
T KOG0307|consen 110 ATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTP----------------GSQAPPSEIKCLSWNRKV 173 (1049)
T ss_pred hhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCC----------------CCCCCcccceEeccchhh
Confidence 3457899999999999955 59999999999999999752111100 012345789999999854
Q ss_pred -CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC-CEEEEEeCC---CEEEEEc---------------
Q psy15157 192 -PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG-DYMVVGTDH---FVLRLYS--------------- 251 (344)
Q Consensus 192 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~---~~i~~~~--------------- 251 (344)
.+|++++.+|.+.|||++..+.+..+........+..++|+|++ ..+++++.| -.|.+|+
T Consensus 174 qhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~ 253 (1049)
T KOG0307|consen 174 SHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQ 253 (1049)
T ss_pred hHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccc
Confidence 48899999999999999987554444433333457889999975 456666654 4677772
Q ss_pred ----------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCe
Q psy15157 252 ----------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 252 ----------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~vwd~~~~~ 319 (344)
.|.+++++++.|+.|.+|+.++++.+..+.. .+.++..+.|.|... .++.++-||.|-|+.+.++.
T Consensus 254 ~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~--~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 254 RGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA--QGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred cceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC--CCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 3458999999999999999999999999864 446899999999655 77888999999999997654
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.9e-16 Score=125.73 Aligned_cols=153 Identities=21% Similarity=0.335 Sum_probs=120.6
Q ss_pred CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--CCCEEEEEeCCCcEEEEEcC
Q psy15157 132 QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--SAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 132 ~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~ 209 (344)
..+|++-..|+|++||..+ ...+..++++...++.++|.. ....+.+|+.||+|++||++
T Consensus 41 ~~vav~lSngsv~lyd~~t------------------g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~R 102 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGT------------------GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIR 102 (376)
T ss_pred eeEEEEecCCeEEEEeccc------------------hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEee
Confidence 5788888999999999864 456778899999999999977 45589999999999999999
Q ss_pred CCccccceeeeccc-cceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE-EeeecccCCCc
Q psy15157 210 KSSVRKAHKTIQES-TFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC-VATFSKAHDGA 287 (344)
Q Consensus 210 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~ 287 (344)
.......+....+. .+..|++.+..++.+++|+.. -..+-.+.+||++..+. +..+...|..
T Consensus 103 s~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~---------------~~s~A~v~lwDvR~~qq~l~~~~eSH~D- 166 (376)
T KOG1188|consen 103 SQAESARISWTQQSGTPFICLDLNCKKNIIACGTEL---------------TRSDASVVLWDVRSEQQLLRQLNESHND- 166 (376)
T ss_pred cchhhhheeccCCCCCcceEeeccCcCCeEEecccc---------------ccCceEEEEEEeccccchhhhhhhhccC-
Confidence 87665555554444 456777766666666665431 23566799999998876 6677666664
Q ss_pred cEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCC
Q psy15157 288 EISSLTFTR-NGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 288 ~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
.|+++.|+| +.+.|++||.||.|.+||+...
T Consensus 167 DVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 167 DVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred cceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 599999999 6678999999999999999754
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-16 Score=123.15 Aligned_cols=187 Identities=20% Similarity=0.328 Sum_probs=133.5
Q ss_pred eEEecCCCceEEEEECC-CCCEEEEEeCC-------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeE
Q psy15157 113 AYVTSHKSPCRAGAFSI-DGQLCATGSVD-------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVT 183 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~-~~~~l~sg~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~ 183 (344)
..|..|.+.|+.++-+| +.++|+|+..+ ..+.||.+......+ ...+.+.+..+. .+-+.|.
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S---------~~~tlE~v~~Ldteavg~i~ 127 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQS---------NSSTLECVASLDTEAVGKIN 127 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcc---------ccchhhHhhcCCHHHhCcee
Confidence 34678899999999999 56677777553 247799986432221 122334445554 5667999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCccc-cceee---eccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEE
Q psy15157 184 CLEFHPSAPILASGSKDKTVKMFDYSKSSVR-KAHKT---IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCS 259 (344)
Q Consensus 184 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~ 259 (344)
|+.|.|++..+++-. |..|.+|++..+..+ ..... ..+....++-+|+|. .+|+.+++
T Consensus 128 cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspH-----------------Hdgnqv~t 189 (370)
T KOG1007|consen 128 CVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPH-----------------HDGNQVAT 189 (370)
T ss_pred eEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCC-----------------CccceEEE
Confidence 999999999888766 889999999876542 11111 112334555667762 24555544
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE-EEEEeCCCcEEEEEcCCC-eeEEEeecCC
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY-LLSSGKDSLVKLWELSSA-RCLIAYTGAG 328 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~s~~~dg~i~vwd~~~~-~~~~~~~~~~ 328 (344)
..|+++..||+++.++...+..+|. ..|..+.|+|+.++ |++|++||.|++||++.- .++.++.+|.
T Consensus 190 -t~d~tl~~~D~RT~~~~~sI~dAHg-q~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~Hs 258 (370)
T KOG1007|consen 190 -TSDSTLQFWDLRTMKKNNSIEDAHG-QRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHS 258 (370)
T ss_pred -eCCCcEEEEEccchhhhcchhhhhc-ceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCc
Confidence 4688999999999999999987775 46999999998765 788999999999999875 4667777664
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=122.96 Aligned_cols=178 Identities=19% Similarity=0.269 Sum_probs=125.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE-EecCCcCCeEEEEEcCCC-CEEEEEe
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-TLYDHIEEVTCLEFHPSA-PILASGS 198 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~-~~l~s~~ 198 (344)
...+++|+|||.+|++| ...+|++||+....... .....+. .-.+..+-|.+++|+|-. ..++.|+
T Consensus 160 aAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c-----------~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gs 227 (406)
T KOG2919|consen 160 AAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDC-----------PVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGS 227 (406)
T ss_pred hheeEEecCCCCeEeec-ccceEEEeeccCCCCCC-----------cchhhhhcccccccceeeeeeccCCCCcceeeec
Confidence 45789999999999987 56789999995321110 0000000 012346778999999955 4899999
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEE
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS-KCV 277 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~ 277 (344)
.-.++-|+.-...+... ...+|.+.|+.++|+++|+.|++|. -.|..|..||++.. .++
T Consensus 228 Y~q~~giy~~~~~~pl~--llggh~gGvThL~~~edGn~lfsGa------------------Rk~dkIl~WDiR~~~~pv 287 (406)
T KOG2919|consen 228 YGQRVGIYNDDGRRPLQ--LLGGHGGGVTHLQWCEDGNKLFSGA------------------RKDDKILCWDIRYSRDPV 287 (406)
T ss_pred ccceeeeEecCCCCcee--eecccCCCeeeEEeccCcCeecccc------------------cCCCeEEEEeehhccchh
Confidence 99999998877765443 3357889999999999888887653 24668999999865 455
Q ss_pred eeecccCC-CccEEEEEEccCCCEEEEEeCCCcEEEEEcCC-CeeEEEeecCCCc
Q psy15157 278 ATFSKAHD-GAEISSLTFTRNGKYLLSSGKDSLVKLWELSS-ARCLIAYTGAGSM 330 (344)
Q Consensus 278 ~~~~~~~~-~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~ 330 (344)
..+..+.. ...-.-....|++++|++|+.||.|++||++. |..+..+..+...
T Consensus 288 ~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~ 342 (406)
T KOG2919|consen 288 YALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDT 342 (406)
T ss_pred hhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccccccc
Confidence 55543322 11222345578999999999999999999998 7766666555433
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=121.82 Aligned_cols=166 Identities=20% Similarity=0.263 Sum_probs=124.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--CCCEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--SAPIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l 194 (344)
.|-+.|.|+.|.|++..+|+-. |..|.+|++.......... ....-..|....++-+|+| +++.+
T Consensus 121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev------------~ss~s~e~~~~ftsg~WspHHdgnqv 187 (370)
T KOG1007|consen 121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEV------------LSSESAEMRHSFTSGAWSPHHDGNQV 187 (370)
T ss_pred HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheee------------cccccccccceecccccCCCCccceE
Confidence 5667999999999999999885 8889999997532210000 0001123667788899999 66677
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++. .|+++..||+++.+....+. ..|...+..+.|+|+..+++ ++|+.||.|+|||.+..
T Consensus 188 ~tt-~d~tl~~~D~RT~~~~~sI~-dAHgq~vrdlDfNpnkq~~l------------------vt~gDdgyvriWD~R~t 247 (370)
T KOG1007|consen 188 ATT-SDSTLQFWDLRTMKKNNSIE-DAHGQRVRDLDFNPNKQHIL------------------VTCGDDGYVRIWDTRKT 247 (370)
T ss_pred EEe-CCCcEEEEEccchhhhcchh-hhhcceeeeccCCCCceEEE------------------EEcCCCccEEEEeccCC
Confidence 764 48999999999876555444 45778899999999765554 48999999999999875
Q ss_pred e-EEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCC
Q psy15157 275 K-CVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 275 ~-~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+ ++..+. .|. .+|.++.|+| ..++|++||.|..|.+|...+
T Consensus 248 k~pv~el~-~Hs-HWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 248 KFPVQELP-GHS-HWVWAVRFNPEHDQLILSGGSDSAVNLSCASS 290 (370)
T ss_pred CccccccC-CCc-eEEEEEEecCccceEEEecCCCceeEEEeccc
Confidence 4 556665 343 4899999999 456788999999999997653
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.5e-15 Score=126.09 Aligned_cols=149 Identities=25% Similarity=0.446 Sum_probs=131.8
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE-------
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY------- 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~------- 250 (344)
.+.|+++.|||...++++|+.||+++||-+............-...+|.+.+|.|+|. .+++++....+..|
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 4689999999999999999999999999997765444444445678899999999999 88888888888888
Q ss_pred -------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEE
Q psy15157 251 -------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVK 311 (344)
Q Consensus 251 -------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~ 311 (344)
++++++++..+..|.|.+....+++.+..++. . +.|..++|+.+++.|++++.+|.|+
T Consensus 293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki--e-G~v~~~~fsSdsk~l~~~~~~GeV~ 369 (514)
T KOG2055|consen 293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI--E-GVVSDFTFSSDSKELLASGGTGEVY 369 (514)
T ss_pred ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee--c-cEEeeEEEecCCcEEEEEcCCceEE
Confidence 78999999999999999999999999988863 2 4699999999999999999999999
Q ss_pred EEEcCCCeeEEEeecCCCc
Q psy15157 312 LWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 312 vwd~~~~~~~~~~~~~~~~ 330 (344)
+||++...+++.|...++.
T Consensus 370 v~nl~~~~~~~rf~D~G~v 388 (514)
T KOG2055|consen 370 VWNLRQNSCLHRFVDDGSV 388 (514)
T ss_pred EEecCCcceEEEEeecCcc
Confidence 9999999999999987665
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-14 Score=129.89 Aligned_cols=191 Identities=19% Similarity=0.203 Sum_probs=134.2
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
...+..|...+.+.+|||||++++.++.+ ..|++||+.++. ...+..+.+|. ..++|+
T Consensus 196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~----------------~~~l~~~~g~~---~~~~wS 256 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGA----------------RKVVASFRGHN---GAPAFS 256 (429)
T ss_pred ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCc----------------eEEEecCCCcc---CceeEC
Confidence 34567888899999999999999988754 369999986421 12233334443 368999
Q ss_pred CCCCEEEEE-eCCCcEEEE--EcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEE---------------
Q psy15157 189 PSAPILASG-SKDKTVKMF--DYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRL--------------- 249 (344)
Q Consensus 189 ~~~~~l~s~-~~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~--------------- 249 (344)
|+|+.|+.+ +.+|.+.|| |+.++... ....+...+....|+|+|+.|+.++ .++...+
T Consensus 257 PDG~~La~~~~~~g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~ 333 (429)
T PRK01742 257 PDGSRLAFASSKDGVLNIYVMGANGGTPS---QLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGG 333 (429)
T ss_pred CCCCEEEEEEecCCcEEEEEEECCCCCeE---eeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecC
Confidence 999977765 468876665 55554332 2223444577899999999877654 3444444
Q ss_pred ------EcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc--CCCeeE
Q psy15157 250 ------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL--SSARCL 321 (344)
Q Consensus 250 ------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~--~~~~~~ 321 (344)
|+|+|+.++..+.++ +.+||+.+++...... .. ...++.|+|||++|+.++.++.+.+|++ .+|+.+
T Consensus 334 ~~~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~-~~---~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~ 408 (429)
T PRK01742 334 RGYSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSS-TF---LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFK 408 (429)
T ss_pred CCCCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecC-CC---CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCce
Confidence 378999998887765 5669998887543322 22 1346789999999999999999988886 368888
Q ss_pred EEeecCCC
Q psy15157 322 IAYTGAGS 329 (344)
Q Consensus 322 ~~~~~~~~ 329 (344)
..+.++.+
T Consensus 409 ~~l~~~~g 416 (429)
T PRK01742 409 ARLPGSDG 416 (429)
T ss_pred EEccCCCC
Confidence 88887654
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-16 Score=136.42 Aligned_cols=167 Identities=18% Similarity=0.294 Sum_probs=124.8
Q ss_pred CCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEE
Q psy15157 118 HKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~ 195 (344)
....|+.+.|.| |...||.++.||.|++|.+...... .....+...+..|...|+++.|||- ...|+
T Consensus 626 Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~-----------e~~~tPe~~lt~h~eKI~slRfHPLAadvLa 694 (1012)
T KOG1445|consen 626 NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLP-----------ENEMTPEKILTIHGEKITSLRFHPLAADVLA 694 (1012)
T ss_pred cCceeeecccCCCChHHeeecccCceEEEEEeccCCCC-----------cccCCcceeeecccceEEEEEecchhhhHhh
Confidence 346799999999 7789999999999999999642111 1223445678899999999999994 45899
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 275 (344)
+++.|-+|++||+.+.+.. .+..+|...|..++|+|+|+.++ +.+.||+|++|+.++++
T Consensus 695 ~asyd~Ti~lWDl~~~~~~--~~l~gHtdqIf~~AWSpdGr~~A-------------------tVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 695 VASYDSTIELWDLANAKLY--SRLVGHTDQIFGIAWSPDGRRIA-------------------TVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred hhhccceeeeeehhhhhhh--heeccCcCceeEEEECCCCccee-------------------eeecCceEEEeCCCCCC
Confidence 9999999999999988654 34567899999999999766655 77888888888888765
Q ss_pred EE-eeecccCCCccEEEEEEccCCCEEEEEeCCC----cEEEEEcCC
Q psy15157 276 CV-ATFSKAHDGAEISSLTFTRNGKYLLSSGKDS----LVKLWELSS 317 (344)
Q Consensus 276 ~~-~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg----~i~vwd~~~ 317 (344)
.. +.-. +..+..-..|.|.-+|+++++.|.|. .|.+||..+
T Consensus 754 ~pv~Eg~-gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 754 QPVYEGK-GPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQT 799 (1012)
T ss_pred CccccCC-CCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhh
Confidence 33 2222 22223345677888899988877654 466776554
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.7e-15 Score=121.28 Aligned_cols=175 Identities=16% Similarity=0.233 Sum_probs=128.5
Q ss_pred cceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 110 YETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
-++..|.||...|-.++|+|. .+.|++++.|.+|.+|++.+ +..+.++. |...|.++.|+
T Consensus 122 epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~t------------------geali~l~-hpd~i~S~sfn 182 (472)
T KOG0303|consen 122 EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGT------------------GEALITLD-HPDMVYSMSFN 182 (472)
T ss_pred cceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccC------------------CceeeecC-CCCeEEEEEec
Confidence 457789999999999999995 56899999999999999975 34455555 99999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEE
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i 268 (344)
.+|.+|++.+.|..|+|||.++++....-. ......-...-|-.+|..+.+|. +...+..+-+
T Consensus 183 ~dGs~l~TtckDKkvRv~dpr~~~~v~e~~-~heG~k~~Raifl~~g~i~tTGf----------------sr~seRq~aL 245 (472)
T KOG0303|consen 183 RDGSLLCTTCKDKKVRVIDPRRGTVVSEGV-AHEGAKPARAIFLASGKIFTTGF----------------SRMSERQIAL 245 (472)
T ss_pred cCCceeeeecccceeEEEcCCCCcEeeecc-cccCCCcceeEEeccCceeeecc----------------ccccccceec
Confidence 999999999999999999999987654432 11222334455666666444332 3456788999
Q ss_pred EeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCee
Q psy15157 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSARC 320 (344)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~ 320 (344)
||....+....+..-...+.|.---|++|.+.++.+| .|+.||.|.+....+
T Consensus 246 wdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P 298 (472)
T KOG0303|consen 246 WDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPP 298 (472)
T ss_pred cCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCc
Confidence 9976543322222122223477777899988876655 799999999987663
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-14 Score=112.60 Aligned_cols=188 Identities=15% Similarity=0.248 Sum_probs=130.1
Q ss_pred CccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 108 AQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 108 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
.+.......+|.++|+.++|. .++|++|+ ||.|+-|..+.+....... ..+. -..+.++-.-.--.|+++..
T Consensus 51 gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K---~lwe--~~~P~~~~~~evPeINam~l 122 (325)
T KOG0649|consen 51 GKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATK---RLWE--VKIPMQVDAVEVPEINAMWL 122 (325)
T ss_pred CCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccch---hhhh--hcCccccCcccCCccceeEe
Confidence 334445558999999999998 55777776 5999999987543321100 0000 00011111112346899999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIK 267 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~ 267 (344)
.|..+-++.++.|+.++-||+++++..+.+ .+|...+.++.--.. ...+++|+.||++|
T Consensus 123 dP~enSi~~AgGD~~~y~~dlE~G~i~r~~--rGHtDYvH~vv~R~~-------------------~~qilsG~EDGtvR 181 (325)
T KOG0649|consen 123 DPSENSILFAGGDGVIYQVDLEDGRIQREY--RGHTDYVHSVVGRNA-------------------NGQILSGAEDGTVR 181 (325)
T ss_pred ccCCCcEEEecCCeEEEEEEecCCEEEEEE--cCCcceeeeeeeccc-------------------CcceeecCCCccEE
Confidence 998877777778999999999999876655 468888888876332 22344899999999
Q ss_pred EEeCCCCeEEeeecc--------cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 268 IWDGVSSKCVATFSK--------AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 268 iwd~~~~~~~~~~~~--------~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+||.++++++..+.. .+.+.+|-+++-+ ..+|++|+ ...+.+|.+++.++..+|.-.
T Consensus 182 vWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCGg-Gp~lslwhLrsse~t~vfpip 246 (325)
T KOG0649|consen 182 VWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCGG-GPKLSLWHLRSSESTCVFPIP 246 (325)
T ss_pred EEeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEecC-CCceeEEeccCCCceEEEecc
Confidence 999999999887752 2334556666664 56777766 567999999999887777543
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.4e-14 Score=131.80 Aligned_cols=210 Identities=16% Similarity=0.199 Sum_probs=156.5
Q ss_pred CCCccceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEE
Q psy15157 106 EPAQYETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC 184 (344)
Q Consensus 106 ~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 184 (344)
.+....+..+..|...|..++.++. +.+|+|||.||+|++|+........ ...+...++....+.+.+
T Consensus 1035 ~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~-----------~s~rS~ltys~~~sr~~~ 1103 (1431)
T KOG1240|consen 1035 NPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEG-----------GSARSELTYSPEGSRVEK 1103 (1431)
T ss_pred CccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCc-----------ceeeeeEEEeccCCceEE
Confidence 4556667888999999999999875 4899999999999999997532221 223444556557788999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCcccc-------ceeeeccccceEEEEEec-CCC-EEEEEeCCCEEEEE-----
Q psy15157 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRK-------AHKTIQESTFVRCLSFHP-CGD-YMVVGTDHFVLRLY----- 250 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~-~l~~~~~~~~i~~~----- 250 (344)
+...+.+..+|.++.||.|++.++....... .......+..+...+|.. .+. .++.++..+.+..|
T Consensus 1104 vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~ 1183 (1431)
T KOG1240|consen 1104 VTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMR 1183 (1431)
T ss_pred EEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhh
Confidence 9999999999999999999999987621111 111111222333344433 233 67788888888888
Q ss_pred --------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCC---CEEEEEe--
Q psy15157 251 --------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG---KYLLSSG-- 305 (344)
Q Consensus 251 --------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~---~~l~s~~-- 305 (344)
+|.+.++++|+..|.+-+||++-+.++..+...+. .+|+.+..+|-. .+.++++
T Consensus 1184 ~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~-~~i~~v~~~~~~~~~S~~vs~~~~ 1262 (1431)
T KOG1240|consen 1184 HDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR-APIRHVWLCPTYPQESVSVSAGSS 1262 (1431)
T ss_pred hhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCccc-CCcceEEeeccCCCCceEEEeccc
Confidence 78899999999999999999999999988875554 688888888733 3555544
Q ss_pred CCCcEEEEEcCCCeeEEEeecC
Q psy15157 306 KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 306 ~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..+.|.+|++.+|.+-.+|-..
T Consensus 1263 ~~nevs~wn~~~g~~~~vl~~s 1284 (1431)
T KOG1240|consen 1263 SNNEVSTWNMETGLRQTVLWAS 1284 (1431)
T ss_pred CCCceeeeecccCcceEEEEcC
Confidence 5788999999999887777654
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.5e-14 Score=129.84 Aligned_cols=117 Identities=16% Similarity=0.172 Sum_probs=96.7
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.|.-.++|.++||+++++|+|..||.|.+|.=-.. .........+.-|..+|++++|+++|.+|+|
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~--------------~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlS 268 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGS--------------SDDSETCTLLHWHHDEVNSLSFSSDGAYLLS 268 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEecccc--------------ccccccceEEEecccccceeEEecCCceEee
Confidence 57777999999999999999999999999964210 1122335677889999999999999999999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
|+..|-+.+|.+.+++. .+ ...-.++|..+.++|++.+.++...|+.|.+.
T Consensus 269 GG~E~VLv~Wq~~T~~k--qf-LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li 319 (792)
T KOG1963|consen 269 GGREGVLVLWQLETGKK--QF-LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLI 319 (792)
T ss_pred cccceEEEEEeecCCCc--cc-ccccCCeeEEEEEcCCCCeEEEEecCceEEEE
Confidence 99999999999999862 22 23356789999999999999999889888874
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-12 Score=114.62 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=123.4
Q ss_pred CCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
+.+....++++|++++|++++ .++.|.+|+++.. .......... ..+....++|+|+++++++
T Consensus 33 ~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~---------------g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v 96 (330)
T PRK11028 33 VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADD---------------GALTFAAESP-LPGSPTHISTDHQGRFLFS 96 (330)
T ss_pred cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCC---------------CceEEeeeec-CCCCceEEEECCCCCEEEE
Confidence 446678899999999887664 5788999998521 0011111111 2234678999999998877
Q ss_pred EeC-CCcEEEEEcCCCc-cccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE-----------------------
Q psy15157 197 GSK-DKTVKMFDYSKSS-VRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY----------------------- 250 (344)
Q Consensus 197 ~~~-dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~----------------------- 250 (344)
++. ++.|.+|++.+.. ...............+++++|+|+++++++ .++.|.+|
T Consensus 97 ~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~ 176 (330)
T PRK11028 97 ASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAG 176 (330)
T ss_pred EEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCC
Confidence 764 8999999997432 212222222233467788999999987654 34666655
Q ss_pred ------cCCCCEEEEEeC-CCcEEEEeCCC--C--eEEeeecccC----CCccEEEEEEccCCCEEEEEe-CCCcEEEEE
Q psy15157 251 ------SSDGRIYCSGSK-DGDIKIWDGVS--S--KCVATFSKAH----DGAEISSLTFTRNGKYLLSSG-KDSLVKLWE 314 (344)
Q Consensus 251 ------~~~~~~l~~~~~-dg~i~iwd~~~--~--~~~~~~~~~~----~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd 314 (344)
+|+|+++++++. ++.|.+||+.. + +.+..+.... .......+.++|++++|+++. .++.|.+|+
T Consensus 177 p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~ 256 (330)
T PRK11028 177 PRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFS 256 (330)
T ss_pred CceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEE
Confidence 677888877776 89999999873 2 3333332110 111234688999999999985 478999999
Q ss_pred cCCCe
Q psy15157 315 LSSAR 319 (344)
Q Consensus 315 ~~~~~ 319 (344)
+....
T Consensus 257 i~~~~ 261 (330)
T PRK11028 257 VSEDG 261 (330)
T ss_pred EeCCC
Confidence 96543
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.4e-14 Score=123.42 Aligned_cols=137 Identities=16% Similarity=0.267 Sum_probs=89.6
Q ss_pred CCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCC-----------cCCCCCCceEEEecCCcCCeEEEE
Q psy15157 119 KSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEP-----------QNDQQGHPVIRTLYDHIEEVTCLE 186 (344)
Q Consensus 119 ~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~h~~~v~~~~ 186 (344)
+..|+|+.|-| +...|+.+-.+|.+.+||.+...... ...... ........++..+.--.+.|+..+
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t-~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~ 297 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGAT-APSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFA 297 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCC-CCcccccCCCCeeEEeeeeccccCCccceeEecccccccee
Confidence 47899999998 44578888899999999874211111 000000 000111123333333456899999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEE
Q psy15157 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYC 258 (344)
Q Consensus 187 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~ 258 (344)
|+|||++||+.+.||.+||||..+.++...++.. -+...|++|+|||+||++|++|..+.+|+-..+.++
T Consensus 298 FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSY--FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVV 367 (636)
T KOG2394|consen 298 FSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSY--FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVV 367 (636)
T ss_pred EcCCCceEEEEecCceEEEeeccHHHHHHHHHhh--ccceEEEEEcCCccEEEecCCcceEEEEEeccceEE
Confidence 9999999999999999999999987665554432 346899999998887775555555555544333333
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-14 Score=116.47 Aligned_cols=178 Identities=16% Similarity=0.232 Sum_probs=130.3
Q ss_pred EEecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-CCeEEEEEcCC
Q psy15157 114 YVTSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-EEVTCLEFHPS 190 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~ 190 (344)
.+.+|...++.++|.. ....+.+|+.||+|++||++... .........+. .+..+++..-.
T Consensus 65 ~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~----------------e~a~~~~~~~~~~~f~~ld~nck 128 (376)
T KOG1188|consen 65 EFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQA----------------ESARISWTQQSGTPFICLDLNCK 128 (376)
T ss_pred eecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecch----------------hhhheeccCCCCCcceEeeccCc
Confidence 4578888899999976 56789999999999999997521 22233344444 46677777767
Q ss_pred CCEEEEEeC----CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcE
Q psy15157 191 APILASGSK----DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDI 266 (344)
Q Consensus 191 ~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i 266 (344)
++++++|+. |-.|.+||++..+.........|...|++++|+|. +.++|++||.||.|
T Consensus 129 ~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~------------------~pnlLlSGSvDGLv 190 (376)
T KOG1188|consen 129 KNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPS------------------DPNLLLSGSVDGLV 190 (376)
T ss_pred CCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCC------------------CCCeEEeecccceE
Confidence 778888754 67899999998765222334568899999999995 56677799999999
Q ss_pred EEEeCCCCeEEeee-cccCCCccEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 267 KIWDGVSSKCVATF-SKAHDGAEISSLTFTRNG-KYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 267 ~iwd~~~~~~~~~~-~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.+||++....--.+ .....+..|.++.|..++ +.|.+-+......+|++..+.+...+.
T Consensus 191 nlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~ 251 (376)
T KOG1188|consen 191 NLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLE 251 (376)
T ss_pred EeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhccc
Confidence 99998765321111 111223569999999876 358888889999999999887655543
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.5e-14 Score=122.30 Aligned_cols=165 Identities=20% Similarity=0.358 Sum_probs=127.4
Q ss_pred CccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 108 AQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 108 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
...+...+.+|.++|.|+++++++..+.+|+-||+|+.|++... ...............+.||.+.|+.+++
T Consensus 333 ~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n--------~dp~ds~dp~vl~~~l~Ghtdavw~l~~ 404 (577)
T KOG0642|consen 333 DVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPN--------QDPDDSYDPSVLSGTLLGHTDAVWLLAL 404 (577)
T ss_pred ceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCC--------CCcccccCcchhccceeccccceeeeee
Confidence 33456678999999999999999999999999999999988510 0011111222445678999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccce------------------------------------------eee-----
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAH------------------------------------------KTI----- 220 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------------------------------------------~~~----- 220 (344)
|+....|++|+.||+++.|+...... ..+ .+.
T Consensus 405 s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~ 483 (577)
T KOG0642|consen 405 SSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSAS 483 (577)
T ss_pred cccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCC
Confidence 99999999999999999999654322 000 000
Q ss_pred ---ccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 221 ---QESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 221 ---~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
.....+.-+.++|.+.+.+.+..++.|+++ +++|.+|++++.|+.+++|.+...
T Consensus 484 ~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 484 PGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred CcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccch
Confidence 011335667788888999999999999987 789999999999999999999888
Q ss_pred eEEeeec
Q psy15157 275 KCVATFS 281 (344)
Q Consensus 275 ~~~~~~~ 281 (344)
.++....
T Consensus 564 ~~~~es~ 570 (577)
T KOG0642|consen 564 TCVLEST 570 (577)
T ss_pred heeeccc
Confidence 7776654
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-13 Score=124.25 Aligned_cols=188 Identities=15% Similarity=0.169 Sum_probs=135.1
Q ss_pred cCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC--E
Q psy15157 117 SHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP--I 193 (344)
Q Consensus 117 ~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~ 193 (344)
.-...|+|+.|+| +..++|.|..+|.|.+||+....... ..........|..+++.+.|..+.. -
T Consensus 240 ~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~------------~s~ls~~~~sh~~~v~~vvW~~~~~~~~ 307 (555)
T KOG1587|consen 240 ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTP------------PSGLSALEVSHSEPVTAVVWLQNEHNTE 307 (555)
T ss_pred ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCC------------CcccccccccCCcCeEEEEEeccCCCCc
Confidence 4577999999999 77899999999999999997532110 1112233456899999999977544 4
Q ss_pred EEEEeCCCcEEEEEcCCCccccce------e----eeccccceEEEEEec-CCCEEEEEeCCCEEEEE------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAH------K----TIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~------~----~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~------------ 250 (344)
|++++.||.|+.|+++.-...... . .......+++++|.+ +-..+++|+..|.|..-
T Consensus 308 f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~ 387 (555)
T KOG1587|consen 308 FFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVS 387 (555)
T ss_pred eEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccc
Confidence 999999999999987654321100 0 012244688899988 45678899999988762
Q ss_pred -------------------cCCCCEEEEEeCCCcEEEEeCC-CCeEEeeecccCCCccEEEEEEccCC-CEEEEEeCCCc
Q psy15157 251 -------------------SSDGRIYCSGSKDGDIKIWDGV-SSKCVATFSKAHDGAEISSLTFTRNG-KYLLSSGKDSL 309 (344)
Q Consensus 251 -------------------~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~ 309 (344)
+|-+..++..+.|.+++||... ...++..+.... ..|++++|||.. ..++++..||.
T Consensus 388 ~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~--~~v~~vaWSptrpavF~~~d~~G~ 465 (555)
T KOG1587|consen 388 YKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSP--DYVTDVAWSPTRPAVFATVDGDGN 465 (555)
T ss_pred ccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhcc--ceeeeeEEcCcCceEEEEEcCCCc
Confidence 4445555555559999999987 555555554322 359999999965 45677788999
Q ss_pred EEEEEcCCC
Q psy15157 310 VKLWELSSA 318 (344)
Q Consensus 310 i~vwd~~~~ 318 (344)
|.+||+...
T Consensus 466 l~iWDLl~~ 474 (555)
T KOG1587|consen 466 LDIWDLLQD 474 (555)
T ss_pred eehhhhhcc
Confidence 999999754
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-13 Score=112.67 Aligned_cols=162 Identities=19% Similarity=0.248 Sum_probs=119.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE--
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS-- 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-- 196 (344)
..+|.++.++ .+.|+++-.+ .|+|||++++....... +...+...+.++.+++.+.+++-
T Consensus 87 pt~IL~VrmN--r~RLvV~Lee-~IyIydI~~MklLhTI~---------------t~~~n~~gl~AlS~n~~n~ylAyp~ 148 (391)
T KOG2110|consen 87 PTSILAVRMN--RKRLVVCLEE-SIYIYDIKDMKLLHTIE---------------TTPPNPKGLCALSPNNANCYLAYPG 148 (391)
T ss_pred CCceEEEEEc--cceEEEEEcc-cEEEEecccceeehhhh---------------ccCCCccceEeeccCCCCceEEecC
Confidence 3456667765 4456665544 49999998775544322 22234555666666666667663
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCc-EEEEeCCCCe
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGD-IKIWDGVSSK 275 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~-i~iwd~~~~~ 275 (344)
....|.|.+||..+-+.. ..+..|.+.+.|++|+++|.+|| |+|..|+ ||||.+.+|+
T Consensus 149 s~t~GdV~l~d~~nl~~v--~~I~aH~~~lAalafs~~G~llA-------------------TASeKGTVIRVf~v~~G~ 207 (391)
T KOG2110|consen 149 STTSGDVVLFDTINLQPV--NTINAHKGPLAALAFSPDGTLLA-------------------TASEKGTVIRVFSVPEGQ 207 (391)
T ss_pred CCCCceEEEEEcccceee--eEEEecCCceeEEEECCCCCEEE-------------------EeccCceEEEEEEcCCcc
Confidence 334699999999876544 34457999999999999777666 5555554 8999999999
Q ss_pred EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 276 CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 276 ~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
.+..|+.+..-..|.+++|+|++++|.+.|+.++|++|.+....
T Consensus 208 kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 208 KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 99999876666679999999999999999999999999996543
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-12 Score=117.31 Aligned_cols=179 Identities=35% Similarity=0.576 Sum_probs=136.0
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.....+..|...|.+++|+|++.++++++. |+.+++|+... ...+..+.+|...|.+++|+
T Consensus 146 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~v~~~~~~ 207 (466)
T COG2319 146 KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT------------------GKPLSTLAGHTDPVSSLAFS 207 (466)
T ss_pred eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC------------------CceEEeeccCCCceEEEEEc
Confidence 344567899999999999999999999886 99999999853 45567777899999999999
Q ss_pred CCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 189 PSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIK 267 (344)
Q Consensus 189 ~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~ 267 (344)
|++. .+++++.|+.|++||...+..... ....+.... ...|++ ++.++++++.|+.++
T Consensus 208 ~~~~~~~~~~~~d~~i~~wd~~~~~~~~~-~~~~~~~~~-~~~~~~-------------------~~~~~~~~~~d~~~~ 266 (466)
T COG2319 208 PDGGLLIASGSSDGTIRLWDLSTGKLLRS-TLSGHSDSV-VSSFSP-------------------DGSLLASGSSDGTIR 266 (466)
T ss_pred CCcceEEEEecCCCcEEEEECCCCcEEee-ecCCCCcce-eEeECC-------------------CCCEEEEecCCCcEE
Confidence 9998 566669999999998875443321 122233322 114555 445555889999999
Q ss_pred EEeCCCCeE-EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee--cCCC
Q psy15157 268 IWDGVSSKC-VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT--GAGS 329 (344)
Q Consensus 268 iwd~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~ 329 (344)
+||.+.... ...+ ..| ...+.++.|+|++..+++++.|+.+.+||+.+........ .|..
T Consensus 267 ~~~~~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 329 (466)
T COG2319 267 LWDLRSSSSLLRTL-SGH-SSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEG 329 (466)
T ss_pred EeeecCCCcEEEEE-ecC-CccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCC
Confidence 999987664 4444 244 3579999999999999999999999999999888777766 5555
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=117.61 Aligned_cols=167 Identities=20% Similarity=0.291 Sum_probs=131.5
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-cCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH-IEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~ 190 (344)
...+.+|++.|+++.++....|+|+++..|.|.|..+.+.... ..+... ...|.-+.++|.
T Consensus 114 hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~t------------------t~f~~~sgqsvRll~ys~s 175 (673)
T KOG4378|consen 114 HRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKT------------------TTFTIDSGQSVRLLRYSPS 175 (673)
T ss_pred hhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccc------------------cceecCCCCeEEEeecccc
Confidence 3457899999999999999999999999999999998653221 222222 345678999998
Q ss_pred CC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE------------------
Q psy15157 191 AP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~------------------ 250 (344)
.+ +|.+++.+|.|.+||+........ ....|..+...++|+|... +|++.+.|..|.+|
T Consensus 176 kr~lL~~asd~G~VtlwDv~g~sp~~~-~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Pls 254 (673)
T KOG4378|consen 176 KRFLLSIASDKGAVTLWDVQGMSPIFH-ASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLS 254 (673)
T ss_pred cceeeEeeccCCeEEEEeccCCCcccc-hhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcc
Confidence 77 677899999999999977654332 2345888899999999655 56677889999987
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCC
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG 298 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 298 (344)
.++|.+|+.|+..|.|..||++..+........|.. .|++++|-|..
T Consensus 255 tvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~-sVt~vafq~s~ 305 (673)
T KOG4378|consen 255 TVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDA-SVTRVAFQPSP 305 (673)
T ss_pred eeeecCCceEEEeecCCceEEEEecccCCCCceEeeeccc-ceeEEEeeecc
Confidence 689999999999999999999987655555446664 59999998764
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-12 Score=112.78 Aligned_cols=178 Identities=15% Similarity=0.246 Sum_probs=120.8
Q ss_pred CceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE-EE
Q psy15157 120 SPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA-SG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~ 197 (344)
+....++|+|+++++++++. ++.|.+|++++... .......+. +.....+++++|++++++ +.
T Consensus 80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~--------------~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~ 144 (330)
T PRK11028 80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGI--------------PVAPIQIIE-GLEGCHSANIDPDNRTLWVPC 144 (330)
T ss_pred CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCC--------------CCCceeecc-CCCcccEeEeCCCCCEEEEee
Confidence 45678999999998888764 88999999863100 001122222 223456788999998775 45
Q ss_pred eCCCcEEEEEcCCCccccc-----eeeeccccceEEEEEecCCCEEEEEeC-CCEEEEE---------------------
Q psy15157 198 SKDKTVKMFDYSKSSVRKA-----HKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRLY--------------------- 250 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~~--------------------- 250 (344)
..++.|.+||+.+...... .. .........+.|+|+|++++++.. ++.+.+|
T Consensus 145 ~~~~~v~v~d~~~~g~l~~~~~~~~~-~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~ 223 (330)
T PRK11028 145 LKEDRIRLFTLSDDGHLVAQEPAEVT-TVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPAD 223 (330)
T ss_pred CCCCEEEEEEECCCCcccccCCCcee-cCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCc
Confidence 5679999999976322111 11 112344678999999999988765 5666554
Q ss_pred ------------cCCCCEEEEEeC-CCcEEEEeCCCCe----EEeeecccCCCccEEEEEEccCCCEEEEEeC-CCcEEE
Q psy15157 251 ------------SSDGRIYCSGSK-DGDIKIWDGVSSK----CVATFSKAHDGAEISSLTFTRNGKYLLSSGK-DSLVKL 312 (344)
Q Consensus 251 ------------~~~~~~l~~~~~-dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-dg~i~v 312 (344)
+|+|++++++.. ++.|.+|++.... .+..+.. +.....+.++|+|++|++++. +++|.+
T Consensus 224 ~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~---~~~p~~~~~~~dg~~l~va~~~~~~v~v 300 (330)
T PRK11028 224 FSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT---ETQPRGFNIDHSGKYLIAAGQKSHHISV 300 (330)
T ss_pred CCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec---cccCCceEECCCCCEEEEEEccCCcEEE
Confidence 478888888754 6889999985432 2222221 123567899999999998775 899999
Q ss_pred EEcC
Q psy15157 313 WELS 316 (344)
Q Consensus 313 wd~~ 316 (344)
|++.
T Consensus 301 ~~~~ 304 (330)
T PRK11028 301 YEID 304 (330)
T ss_pred EEEc
Confidence 9885
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=7e-13 Score=109.54 Aligned_cols=192 Identities=14% Similarity=0.165 Sum_probs=132.2
Q ss_pred cCCCceEEEEECCCCCEEEEEe--CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGS--VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
.|...+.++.+++.+.++|--+ ..|.|.|||+.+ .+.+..+..|.+.+-+++|+++|.+|
T Consensus 127 ~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~n------------------l~~v~~I~aH~~~lAalafs~~G~ll 188 (391)
T KOG2110|consen 127 PNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTIN------------------LQPVNTINAHKGPLAALAFSPDGTLL 188 (391)
T ss_pred CCccceEeeccCCCCceEEecCCCCCceEEEEEccc------------------ceeeeEEEecCCceeEEEECCCCCEE
Confidence 4556677777777778888643 368899999954 56678888999999999999999999
Q ss_pred EEEeCCCc-EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCC-------------CCEEEEE
Q psy15157 195 ASGSKDKT-VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD-------------GRIYCSG 260 (344)
Q Consensus 195 ~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~-------------~~~l~~~ 260 (344)
||+|..|+ |||+.+.+++....++.......|.+++|+|++.+|++.+..++|.+|.-+ ..++-.-
T Consensus 189 ATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~ 268 (391)
T KOG2110|consen 189 ATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKV 268 (391)
T ss_pred EEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccccCCCCCCCCCCcccchh
Confidence 99999998 789999999877666654456679999999999999999999999998111 1111000
Q ss_pred eC-------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC--CeeEEEeecC
Q psy15157 261 SK-------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS--ARCLIAYTGA 327 (344)
Q Consensus 261 ~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~--~~~~~~~~~~ 327 (344)
+. .+.-.+||....-....+..... ..+..+.=.+...++..++.||.++.|.+.. |.....++.|
T Consensus 269 sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~-~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~~gGec~lik~h 343 (391)
T KOG2110|consen 269 SKAATSYLPSQVSSVLDQSRKFATAKLPESGR-KNICSLSSIQKIPRVLVASYDGHLYSYRLPPKEGGECALIKRH 343 (391)
T ss_pred hhhhhhhcchhhhhhhhhccceeEEEccCCCc-cceEEeeccCCCCEEEEEEcCCeEEEEEcCCCCCceeEEEEee
Confidence 00 11222345433333333332211 1244443345788999999999999998754 3333344433
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.7e-14 Score=120.67 Aligned_cols=149 Identities=22% Similarity=0.326 Sum_probs=111.9
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 210 (344)
...|+.++.||.+.|-+-. .+..+.+..|.+.+.+-.|+|+|.-|++++.||.|++|.- +
T Consensus 75 ~d~~~i~s~DGkf~il~k~-------------------~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-s 134 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKS-------------------ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-S 134 (737)
T ss_pred cceEEEEcCCceEEEeccc-------------------chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-c
Confidence 3478888899999988643 4455677889999999999999999999999999999984 3
Q ss_pred CccccceeeeccccceEEEEEecCCCEEEEEeCC--------------------CEEE--EEcCCCCEEEEEeCCCcEEE
Q psy15157 211 SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--------------------FVLR--LYSSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 211 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--------------------~~i~--~~~~~~~~l~~~~~dg~i~i 268 (344)
+-..... .+...+|+|++|.|+.+.++.|..+ |.|. -|++...++++|+.|-..++
T Consensus 135 GMLRStl--~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKv 212 (737)
T KOG1524|consen 135 GMLRSTV--VQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKI 212 (737)
T ss_pred chHHHHH--hhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEe
Confidence 4333322 3456789999999987776665432 2221 16899999999999999999
Q ss_pred EeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
||.. |..+..-. .| ..+|++++|+|+ +.++.++
T Consensus 213 WD~~-G~~Lf~S~-~~-ey~ITSva~npd-~~~~v~S 245 (737)
T KOG1524|consen 213 WDAQ-GANLFTSA-AE-EYAITSVAFNPE-KDYLLWS 245 (737)
T ss_pred eccc-CcccccCC-hh-ccceeeeeeccc-cceeeee
Confidence 9964 44443332 33 357999999999 5555555
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-14 Score=122.43 Aligned_cols=204 Identities=22% Similarity=0.244 Sum_probs=149.1
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCC-----------------cC------------
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEP-----------------QN------------ 164 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~-----------------~~------------ 164 (344)
.|.+|.+.|+.+.|+..|..+++||.|..|.+||..+......+..... ..
T Consensus 137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i 216 (559)
T KOG1334|consen 137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEI 216 (559)
T ss_pred cccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeee
Confidence 4679999999999999999999999999999999976443332221110 00
Q ss_pred -CCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeee----------------------
Q psy15157 165 -DQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTI---------------------- 220 (344)
Q Consensus 165 -~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------------------- 220 (344)
......-...+..|.++|.-++.-|+.. -|.|++.|+.+.-+|++.......+...
T Consensus 217 ~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~ 296 (559)
T KOG1334|consen 217 LETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNE 296 (559)
T ss_pred ccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccc
Confidence 0011112345677999999999999775 7899999999999998765322111000
Q ss_pred -------------------------------------ccccceEEEEEecCCCEEEEEeCCCEEEEE-------------
Q psy15157 221 -------------------------------------QESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------- 250 (344)
Q Consensus 221 -------------------------------------~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------- 250 (344)
.....|+|++|+.++.-+++...|-.|.+|
T Consensus 297 faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~ 376 (559)
T KOG1334|consen 297 FAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPS 376 (559)
T ss_pred cccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCC
Confidence 012246777777665555555555555554
Q ss_pred --------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 251 --------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 --------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
.|...|+++||.-|.|.||+-.+++.+..+...++ -|+|+.=+|--..|+++
T Consensus 377 s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~--VVNCLEpHP~~PvLAsS 454 (559)
T KOG1334|consen 377 SPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRH--VVNCLEPHPHLPVLASS 454 (559)
T ss_pred cchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccc--eEeccCCCCCCchhhcc
Confidence 57788999999999999999999999888875444 69999999999999999
Q ss_pred eCCCcEEEEEcCCCe
Q psy15157 305 GKDSLVKLWELSSAR 319 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~ 319 (344)
|-|..|+||--.+.+
T Consensus 455 Gid~DVKIWTP~~~e 469 (559)
T KOG1334|consen 455 GIDHDVKIWTPLTAE 469 (559)
T ss_pred CCccceeeecCCccc
Confidence 999999999875443
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-12 Score=105.82 Aligned_cols=165 Identities=18% Similarity=0.256 Sum_probs=116.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.-..+|.++.++++ .+++. ..+.|.||...... .....+.+.....+ +.+++-+.+..+|+-
T Consensus 92 ~f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~--------------k~l~~~et~~NPkG-lC~~~~~~~k~~Laf 153 (346)
T KOG2111|consen 92 SFNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNP--------------KLLHVIETRSNPKG-LCSLCPTSNKSLLAF 153 (346)
T ss_pred EeccceeeEEEcCC--eEEEE-ecCeEEEEEcCCCh--------------hheeeeecccCCCc-eEeecCCCCceEEEc
Confidence 45678888888754 44444 36789999986210 00111222222222 333322223334443
Q ss_pred -EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCc-EEEEeCCCC
Q psy15157 197 -GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGD-IKIWDGVSS 274 (344)
Q Consensus 197 -~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~-i~iwd~~~~ 274 (344)
|-.-|.|+|-|+...+.........|...|.|++.+-+|..+| |+|..|+ |||||..+|
T Consensus 154 Pg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vA-------------------TaStkGTLIRIFdt~~g 214 (346)
T KOG2111|consen 154 PGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVA-------------------TASTKGTLIRIFDTEDG 214 (346)
T ss_pred CCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEE-------------------EeccCcEEEEEEEcCCC
Confidence 3446999999998765534455677999999999998666555 6666665 899999999
Q ss_pred eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+.++.+..+...+.|.+++|+|++.+|+++|+-|+|+||.++..
T Consensus 215 ~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 215 TLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred cEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence 99999998877788999999999999999999999999999764
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.6e-12 Score=113.66 Aligned_cols=190 Identities=16% Similarity=0.168 Sum_probs=127.4
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..+..+...+.+.+|||||+.|+..+. +..|.+|++.++. ...+..+.+ .+...+|+|
T Consensus 192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~----------------~~~l~~~~~---~~~~~~~SP 252 (429)
T PRK03629 192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA----------------VRQVASFPR---HNGAPAFSP 252 (429)
T ss_pred EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC----------------eEEccCCCC---CcCCeEECC
Confidence 345566778999999999998887543 3568899986421 111222233 344679999
Q ss_pred CCCEEEEE-eCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-CEEEE----------------
Q psy15157 190 SAPILASG-SKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-FVLRL---------------- 249 (344)
Q Consensus 190 ~~~~l~s~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~---------------- 249 (344)
||+.|+.. +.+| .|++||+.+++.... ......+....|+|+|+.|+..+.. +...+
T Consensus 253 DG~~La~~~~~~g~~~I~~~d~~tg~~~~l---t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~ 329 (429)
T PRK03629 253 DGSKLAFALSKTGSLNLYVMDLASGQIRQV---TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWE 329 (429)
T ss_pred CCCEEEEEEcCCCCcEEEEEECCCCCEEEc---cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecC
Confidence 99977644 4455 488999987754322 2223456788999999988776643 33333
Q ss_pred --------EcCCCCEEEEEeCC---CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCc---EEEEEc
Q psy15157 250 --------YSSDGRIYCSGSKD---GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL---VKLWEL 315 (344)
Q Consensus 250 --------~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~---i~vwd~ 315 (344)
|+|+|++++..+.+ ..|.+||+.+++.. .+.... ......|+|||++|+.++.++. ++++++
T Consensus 330 ~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~---~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~ 405 (429)
T PRK03629 330 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTF---LDETPSIAPNGTMVIYSSSQGMGSVLNLVST 405 (429)
T ss_pred CCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCC---CCCCceECCCCCEEEEEEcCCCceEEEEEEC
Confidence 37899988776544 35889999888644 333222 2346789999999999887765 677777
Q ss_pred CCCeeEEEeecCCC
Q psy15157 316 SSARCLIAYTGAGS 329 (344)
Q Consensus 316 ~~~~~~~~~~~~~~ 329 (344)
+|+....+.++.+
T Consensus 406 -~G~~~~~l~~~~~ 418 (429)
T PRK03629 406 -DGRFKARLPATDG 418 (429)
T ss_pred -CCCCeEECccCCC
Confidence 5666677776543
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.6e-13 Score=108.60 Aligned_cols=179 Identities=16% Similarity=0.214 Sum_probs=141.6
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..++..|...|++++|+|..+.+++++.|..-+||.... ...+++...+..+...++++.|+|.+
T Consensus 48 ~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~---------------~~~WkptlvLlRiNrAAt~V~WsP~e 112 (361)
T KOG1523|consen 48 AHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPS---------------GGTWKPTLVLLRINRAATCVKWSPKE 112 (361)
T ss_pred ceehhhhCcceeEEeecCCCCceeEccCCCCccccccCC---------------CCeeccceeEEEeccceeeEeecCcC
Confidence 446788999999999999999999999999999998742 24567777888899999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCcccccee--eeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHK--TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
+.|++|+.-..|.||-++..+.-...+ .......|+++.|+|++-++++|+.|+.+++|
T Consensus 113 nkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk 192 (361)
T KOG1523|consen 113 NKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSK 192 (361)
T ss_pred ceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccC
Confidence 999999999999999987654321111 12345679999999999999999999999997
Q ss_pred ----------------------cCCCCEEEEEeCCCcEEEEeCCCCe-EEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 251 ----------------------SSDGRIYCSGSKDGDIKIWDGVSSK-CVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 251 ----------------------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
+|+|..|+-.+.|+.+.+-|..... .+......+ -+..++.|-.+. .++.++.|
T Consensus 193 ~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~--lP~ls~~~ise~-~vv~ag~~ 269 (361)
T KOG1523|consen 193 MPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQ--LPLLSVSWISEN-SVVAAGYD 269 (361)
T ss_pred CcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhcc--CCceeeEeecCC-ceeecCCC
Confidence 7889999999999999999977664 344443233 356777776543 34445555
Q ss_pred C
Q psy15157 308 S 308 (344)
Q Consensus 308 g 308 (344)
.
T Consensus 270 c 270 (361)
T KOG1523|consen 270 C 270 (361)
T ss_pred C
Confidence 3
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-11 Score=111.23 Aligned_cols=192 Identities=32% Similarity=0.541 Sum_probs=146.3
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-CCeEEEEE-cCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-EEVTCLEF-HPSA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~-~~~~ 191 (344)
.+..|...+.++.|.+.+..++.++.|+.+.+|+.... ......+..+. ..+..+.+ ++++
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNG-----------------EKLIKSLEGLHDSSVSKLALSSPDG 122 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCC-----------------ceeEEEEeccCCCceeeEEEECCCc
Confidence 45789999999999999999999999999999998642 12344455533 36777777 7877
Q ss_pred C-EEEEEeC-CCcEEEEEcCC-CccccceeeeccccceEEEEEecCCCEEEEEeC-CCEEEEE-----------------
Q psy15157 192 P-ILASGSK-DKTVKMFDYSK-SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRLY----------------- 250 (344)
Q Consensus 192 ~-~l~s~~~-dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~~----------------- 250 (344)
. .++..+. |+.+.+||... .. .......|...+..++|+|++.+++.++. ++.+++|
T Consensus 123 ~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (466)
T COG2319 123 NSILLASSSLDGTVKLWDLSTPGK--LIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDP 200 (466)
T ss_pred ceEEeccCCCCccEEEEEecCCCe--EEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCc
Confidence 7 5555444 99999999987 32 23344567788999999999998888885 9999998
Q ss_pred ------cCCCC-EEEEEeCCCcEEEEeCCCCeEEe-eecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee-E
Q psy15157 251 ------SSDGR-IYCSGSKDGDIKIWDGVSSKCVA-TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC-L 321 (344)
Q Consensus 251 ------~~~~~-~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~ 321 (344)
.+++. ++++++.|+.|++||...+.... .+. .|.. .. ...|+|++.++++++.|+.+++|+++.... +
T Consensus 201 v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 277 (466)
T COG2319 201 VSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLS-GHSD-SV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLL 277 (466)
T ss_pred eEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecC-CCCc-ce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEE
Confidence 55666 55555999999999988777777 454 3332 22 228999998999999999999999997765 5
Q ss_pred EEeecC
Q psy15157 322 IAYTGA 327 (344)
Q Consensus 322 ~~~~~~ 327 (344)
..+.+|
T Consensus 278 ~~~~~~ 283 (466)
T COG2319 278 RTLSGH 283 (466)
T ss_pred EEEecC
Confidence 555444
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.9e-13 Score=126.21 Aligned_cols=161 Identities=17% Similarity=0.215 Sum_probs=129.0
Q ss_pred CCCceEEEecCCcCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCccc-----cceeeeccccceEEEEEecCCCEEEE
Q psy15157 167 QGHPVIRTLYDHIEEVTCLEFHPSA-PILASGSKDKTVKMFDYSKSSVR-----KAHKTIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 167 ~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
..+..+..+..|...+..++.++.. .+|+|||.||+|++||.+.-... ...........+.++.+.+.++.+++
T Consensus 1036 p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1036 PRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred ccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEE
Confidence 4466788899999999999998766 89999999999999998753211 11222225678899999999999999
Q ss_pred EeCCCEEEEE---------------------------------cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCC
Q psy15157 241 GTDHFVLRLY---------------------------------SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286 (344)
Q Consensus 241 ~~~~~~i~~~---------------------------------~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 286 (344)
++.||.|++. ...+ ..++.+..-+.|..||.++......++.....
T Consensus 1116 ~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~h 1195 (1431)
T KOG1240|consen 1116 STKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRH 1195 (1431)
T ss_pred EcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccc
Confidence 9999999986 1122 36777888899999999988766665533333
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+.|++++.+|.+.+++.|+..|.+.+||+|=+.++..+..+
T Consensus 1196 G~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P 1236 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHP 1236 (1431)
T ss_pred cceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCc
Confidence 57999999999999999999999999999999888877643
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.3e-13 Score=113.24 Aligned_cols=154 Identities=21% Similarity=0.276 Sum_probs=113.3
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCC---------
Q psy15157 183 TCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD--------- 253 (344)
Q Consensus 183 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~--------- 253 (344)
.+++|+.+|..+++|+.||++|+|++..... ......|...|.++.|+|||++|++-+.+ ..++|+.+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t--~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLT--ILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchh--hhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 7899999999999999999999999765532 33445678889999999999999999999 99999321
Q ss_pred ----------------C---C-EEE-EEeCCCcEEEEeCCCCeE---E--eeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 254 ----------------G---R-IYC-SGSKDGDIKIWDGVSSKC---V--ATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 254 ----------------~---~-~l~-~~~~dg~i~iwd~~~~~~---~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
+ . +++ .-..-+.|+.||+..... . ......+ ..|++++.+++|++++.|+.|
T Consensus 225 ~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~--~siSsl~VS~dGkf~AlGT~d 302 (398)
T KOG0771|consen 225 PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRF--KSISSLAVSDDGKFLALGTMD 302 (398)
T ss_pred CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhcc--CcceeEEEcCCCcEEEEeccC
Confidence 1 1 222 223334566655443221 1 1111122 259999999999999999999
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 308 SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 308 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
|.|-|++..+-++++-++..... ....++|+||.
T Consensus 303 GsVai~~~~~lq~~~~vk~aH~~-~VT~ltF~Pds 336 (398)
T KOG0771|consen 303 GSVAIYDAKSLQRLQYVKEAHLG-FVTGLTFSPDS 336 (398)
T ss_pred CcEEEEEeceeeeeEeehhhhee-eeeeEEEcCCc
Confidence 99999999999988877754333 67777777764
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=119.49 Aligned_cols=161 Identities=20% Similarity=0.287 Sum_probs=117.7
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC----------------------CcCCCCCCceE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE----------------------PQNDQQGHPVI 172 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 172 (344)
+.+|.+.|.|-.|+|||.-|+|++.||.|++|.-..+.........+ ..........+
T Consensus 100 v~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~ 179 (737)
T KOG1524|consen 100 ISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKI 179 (737)
T ss_pred hhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccce
Confidence 57899999999999999999999999999999986554322211111 01112223344
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS 252 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~ 252 (344)
...+.|.+-|.++.|++..++++||+.|-..++||.-.. ..+....|..+|++++|+|+ ..++++
T Consensus 180 i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~---~Lf~S~~~ey~ITSva~npd-~~~~v~----------- 244 (737)
T KOG1524|consen 180 IRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGA---NLFTSAAEEYAITSVAFNPE-KDYLLW----------- 244 (737)
T ss_pred eEEeccCcEEEEeecCccccceeecCCceeEEeecccCc---ccccCChhccceeeeeeccc-cceeee-----------
Confidence 567889999999999999999999999999999996543 23455568889999999997 444432
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEE
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v 312 (344)
|.. +.| +..... +.|..++|++||..++.|+..|.+.+
T Consensus 245 --------S~n-t~R------------~~~p~~-GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 245 --------SYN-TAR------------FSSPRV-GSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred --------eee-eee------------ecCCCc-cceEEEEEcCCCceeeccccCceEEE
Confidence 211 222 333333 46899999999999999888887654
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=114.23 Aligned_cols=179 Identities=22% Similarity=0.403 Sum_probs=137.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
..-.|...|+.+.|+..|+||+|..-+ ..|.|+++... ....-|....+.|.++.|+|.
T Consensus 516 ~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~------------------~sQ~PF~kskG~vq~v~FHPs 577 (733)
T KOG0650|consen 516 IVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKR------------------KSQSPFRKSKGLVQRVKFHPS 577 (733)
T ss_pred EEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccc------------------cccCchhhcCCceeEEEecCC
Confidence 445788999999999999999997664 46889988532 222334455677999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
..+|+.++. ..|+|||+......+.. ......|..++.+|.|..|++|+.++.+..|
T Consensus 578 ~p~lfVaTq-~~vRiYdL~kqelvKkL--~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr 654 (733)
T KOG0650|consen 578 KPYLFVATQ-RSVRIYDLSKQELVKKL--LTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVR 654 (733)
T ss_pred CceEEEEec-cceEEEehhHHHHHHHH--hcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhh
Confidence 998888775 78999999886554443 3356679999999999999999999999887
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCC------CCe---EEeeecccCC--CccEEEEEEccCCCEEEEEeCCCcEEEE
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGV------SSK---CVATFSKAHD--GAEISSLTFTRNGKYLLSSGKDSLVKLW 313 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~------~~~---~~~~~~~~~~--~~~v~~i~~~~~~~~l~s~~~dg~i~vw 313 (344)
++.-.++++|+.||++.||-.. ..- ++..+.++.. ...|..+.|+|...+|++++.||+|++|
T Consensus 655 ~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 655 SVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred hhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 3455689999999999998532 111 2233332211 1237888999999999999999999998
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.2e-12 Score=117.49 Aligned_cols=194 Identities=20% Similarity=0.320 Sum_probs=149.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC--
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-- 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-- 192 (344)
+.|-...-..-.||+|+++++... +..|.||...+ +.++..+.+|..++..+.+.|...
T Consensus 12 lgg~n~~~~~avfSnD~k~l~~~~-~~~V~VyS~~T------------------g~~i~~l~~~~a~l~s~~~~~~~~~~ 72 (792)
T KOG1963|consen 12 LGGRNGNKSPAVFSNDAKFLFLCT-GNFVKVYSTAT------------------GECITSLEDHTAPLTSVIVLPSSENA 72 (792)
T ss_pred eccccceecccccccCCcEEEEee-CCEEEEEecch------------------HhhhhhcccccCccceeeecCCCccc
Confidence 333333334457899998877764 56899999965 445567889999999999988554
Q ss_pred -EEEEEeCCCcEEEEEcCCCccccce------------------------------------------------------
Q psy15157 193 -ILASGSKDKTVKMFDYSKSSVRKAH------------------------------------------------------ 217 (344)
Q Consensus 193 -~l~s~~~dg~i~iwd~~~~~~~~~~------------------------------------------------------ 217 (344)
++++++.||.|++||...+...+.+
T Consensus 73 ~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~ 152 (792)
T KOG1963|consen 73 NYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSA 152 (792)
T ss_pred eEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeecccc
Confidence 6789999999999995554322211
Q ss_pred -----------------------------------------------eeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 218 -----------------------------------------------KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 218 -----------------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
....|...++|.++||+++++++|..+|.|.+|
T Consensus 153 ~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw 232 (792)
T KOG1963|consen 153 KGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVW 232 (792)
T ss_pred chhhhhhhcCCccEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEE
Confidence 000123346889999999999999999999998
Q ss_pred ---------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 251 ---------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 251 ---------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
+++|.+|++|+..|.+.+|.+.+++ +.+. ..-+++|..+.++||+.+.+.
T Consensus 233 ~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kqfL-PRLgs~I~~i~vS~ds~~~sl 309 (792)
T KOG1963|consen 233 RDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--KQFL-PRLGSPILHIVVSPDSDLYSL 309 (792)
T ss_pred eccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC--cccc-cccCCeeEEEEEcCCCCeEEE
Confidence 7899999999999999999999998 3333 233468999999999999999
Q ss_pred EeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 304 SGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
...|+.|.+....+-....++.|-...
T Consensus 310 ~~~DNqI~li~~~dl~~k~tIsgi~~~ 336 (792)
T KOG1963|consen 310 VLEDNQIHLIKASDLEIKSTISGIKPP 336 (792)
T ss_pred EecCceEEEEeccchhhhhhccCccCC
Confidence 999999999988777766666654433
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=2e-12 Score=116.94 Aligned_cols=195 Identities=18% Similarity=0.198 Sum_probs=134.6
Q ss_pred EecCCCceEEEEECCCC--CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-
Q psy15157 115 VTSHKSPCRAGAFSIDG--QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA- 191 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~--~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 191 (344)
...|..+|+.+.|-.+. .-|++++.||.|..|+++...........+. ......-..-...+++++|.+..
T Consensus 287 ~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~------~~~~~~~~~~~~~~t~~~F~~~~p 360 (555)
T KOG1587|consen 287 EVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLES------KKHKGQQSSKAVGATSLKFEPTDP 360 (555)
T ss_pred cccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhccccc------ccccccccccccceeeEeeccCCC
Confidence 45799999999997644 4599999999999998864322111000000 00000001123468899999854
Q ss_pred CEEEEEeCCCcEEEEEcCCCcccc------ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRK------AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------- 251 (344)
..|+.|+.+|.|.--+....+... ......|.++|+++.++|=+..++..+.|..+++|+
T Consensus 361 ~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~ 440 (555)
T KOG1587|consen 361 NHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSS 440 (555)
T ss_pred ceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhc
Confidence 489999999999874433222111 113345788999999999877777666699999992
Q ss_pred ----------C-CCCEEEEEeCCCcEEEEeCCCC--eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 252 ----------S-DGRIYCSGSKDGDIKIWDGVSS--KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 252 ----------~-~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
| ....|+++..||.|.+||+... +++.+.... ....+.+.|+++|+.|+.|+..|.+++|++..
T Consensus 441 ~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~--~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 441 PDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVC--SPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred cceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccccc--ccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 2 2356888899999999998754 344444322 34578889999999999999999999999954
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.4e-12 Score=107.16 Aligned_cols=192 Identities=17% Similarity=0.214 Sum_probs=144.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-E
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-I 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 193 (344)
...-..+|..++.. ...|++|-.+|.+.+|....+... ...+..+..+ ..+..+.-++... +
T Consensus 101 ~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~~k~~d~h--------------ss~l~~la~g-~g~~~~r~~~~~p~I 163 (412)
T KOG3881|consen 101 VSLGTKSIKGLKLA--DGTLITCVSSGNLQVRHDKSGDLH--------------SSKLIKLATG-PGLYDVRQTDTDPYI 163 (412)
T ss_pred cccccccccchhhc--CCEEEEEecCCcEEEEeccCCccc--------------cccceeeecC-CceeeeccCCCCCce
Confidence 34556677777665 346778888999999998632111 1122222222 4566677777655 5
Q ss_pred EEEEeCC--CcEEEEEcCCCccccceeeec-------cccceEEEEEecC--CCEEEEEeCCCEEEEE------------
Q psy15157 194 LASGSKD--KTVKMFDYSKSSVRKAHKTIQ-------ESTFVRCLSFHPC--GDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 194 l~s~~~d--g~i~iwd~~~~~~~~~~~~~~-------~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~------------ 250 (344)
+++|+.. ..+.|||+...+.+...+... -.-+++.+.|-+. ...|++++.-+.+++|
T Consensus 164 va~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~f 243 (412)
T KOG3881|consen 164 VATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQF 243 (412)
T ss_pred EecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEe
Confidence 6669988 889999998874333222211 2346788999987 8899999999999999
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
.|+|+++++|..-|.+..||++.++.......+..+ .|.+|..+|.+++|+++|-|..|||+|+.+.
T Consensus 244 d~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tG-sirsih~hp~~~~las~GLDRyvRIhD~ktr 322 (412)
T KOG3881|consen 244 DFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITG-SIRSIHCHPTHPVLASCGLDRYVRIHDIKTR 322 (412)
T ss_pred ccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccC-CcceEEEcCCCceEEeeccceeEEEeecccc
Confidence 578999999999999999999999988774445554 6999999999999999999999999999997
Q ss_pred eeEEEe
Q psy15157 319 RCLIAY 324 (344)
Q Consensus 319 ~~~~~~ 324 (344)
++++..
T Consensus 323 kll~kv 328 (412)
T KOG3881|consen 323 KLLHKV 328 (412)
T ss_pred hhhhhh
Confidence 776554
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.6e-12 Score=112.20 Aligned_cols=187 Identities=20% Similarity=0.227 Sum_probs=123.8
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
.+..+...+.+.+|+|||+.++..+.+ ..|.+||+.++ .. ..+....+.+...+|+|+
T Consensus 190 ~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g------------------~~-~~l~~~~g~~~~~~~SPD 250 (427)
T PRK02889 190 SALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATG------------------RR-RVVANFKGSNSAPAWSPD 250 (427)
T ss_pred EeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCC------------------CE-EEeecCCCCccceEECCC
Confidence 345678889999999999998887653 35999998642 11 122223345668899999
Q ss_pred CCEEE-EEeCCCcEEEEEcC--CCccccceeeeccccceEEEEEecCCCEEEEEeC-CCEEEE-----------------
Q psy15157 191 APILA-SGSKDKTVKMFDYS--KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRL----------------- 249 (344)
Q Consensus 191 ~~~l~-s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~----------------- 249 (344)
|+.|+ +.+.+|...||.++ .+... ....+........|+|+|++++..+. .+...+
T Consensus 251 G~~la~~~~~~g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g 327 (427)
T PRK02889 251 GRTLAVALSRDGNSQIYTVNADGSGLR---RLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTG 327 (427)
T ss_pred CCEEEEEEccCCCceEEEEECCCCCcE---ECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCC
Confidence 98765 66778887777653 33221 11223334566789999998876553 233333
Q ss_pred -------EcCCCCEEEEEeCCC---cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC---cEEEEEcC
Q psy15157 250 -------YSSDGRIYCSGSKDG---DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS---LVKLWELS 316 (344)
Q Consensus 250 -------~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg---~i~vwd~~ 316 (344)
|+|+|++++..+.++ .|.+||+.+++...... .. ......|+|||+.|+.++.++ .+++.++
T Consensus 328 ~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~-~~---~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~- 402 (427)
T PRK02889 328 SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTD-TT---RDESPSFAPNGRYILYATQQGGRSVLAAVSS- 402 (427)
T ss_pred CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccC-CC---CccCceECCCCCEEEEEEecCCCEEEEEEEC-
Confidence 488999998777654 59999998887543322 21 245789999999988876544 3566666
Q ss_pred CCeeEEEeecC
Q psy15157 317 SARCLIAYTGA 327 (344)
Q Consensus 317 ~~~~~~~~~~~ 327 (344)
+|+....+..+
T Consensus 403 ~g~~~~~l~~~ 413 (427)
T PRK02889 403 DGRIKQRLSVQ 413 (427)
T ss_pred CCCceEEeecC
Confidence 46555556543
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.8e-13 Score=116.02 Aligned_cols=182 Identities=20% Similarity=0.293 Sum_probs=138.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcC---------------------CCCCCceEEEecCCc
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQN---------------------DQQGHPVIRTLYDHI 179 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~h~ 179 (344)
....+.++.+|++++.|+.-|.|-.+|+.++.........+... -...+..+..++.|
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk~~- 209 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLKRH- 209 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeehhhc-
Confidence 45678899999999999999999999998764433222211110 01222333334433
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEE
Q psy15157 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCS 259 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~ 259 (344)
..|..+.|-|..-+|++++..|.++--|+.+|+....+.. ..+.+..++-+|-+.. +-+
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t--~~G~~~vm~qNP~NaV-------------------ih~ 268 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRT--GAGRTDVMKQNPYNAV-------------------IHL 268 (545)
T ss_pred CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHc--cCCccchhhcCCccce-------------------EEE
Confidence 4578899999998999999999999999999987766654 4456677777774443 337
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
|...|+|.+|...+.+++..+. .|. ++|.+|++.++|+|++|.|.|..++|||++.-..+.++..
T Consensus 269 GhsnGtVSlWSP~skePLvKiL-cH~-g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t 333 (545)
T KOG1272|consen 269 GHSNGTVSLWSPNSKEPLVKIL-CHR-GPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT 333 (545)
T ss_pred cCCCceEEecCCCCcchHHHHH-hcC-CCcceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence 8889999999999888888776 444 4799999999999999999999999999999888877765
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-12 Score=102.86 Aligned_cols=124 Identities=19% Similarity=0.284 Sum_probs=89.1
Q ss_pred CCCceEEEEECCCCCEEEE--EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCAT--GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~s--g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
..++|.+++|+|+|+.||+ |..++.|.+||++ ...+..+ +...++.+.|+|+|++|+
T Consensus 58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-------------------~~~i~~~--~~~~~n~i~wsP~G~~l~ 116 (194)
T PF08662_consen 58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-------------------GKKIFSF--GTQPRNTISWSPDGRFLV 116 (194)
T ss_pred CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-------------------ccEeEee--cCCCceEEEECCCCCEEE
Confidence 4567999999999998655 4467899999985 2333444 356788999999999999
Q ss_pred EEeCC---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy15157 196 SGSKD---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 196 s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~ 272 (344)
+|+.+ |.|.+||+++.+.+.. ..+ ..++.++|+|+|+++++++.... -..|..++||+.
T Consensus 117 ~~g~~n~~G~l~~wd~~~~~~i~~---~~~-~~~t~~~WsPdGr~~~ta~t~~r-------------~~~dng~~Iw~~- 178 (194)
T PF08662_consen 117 LAGFGNLNGDLEFWDVRKKKKIST---FEH-SDATDVEWSPDGRYLATATTSPR-------------LRVDNGFKIWSF- 178 (194)
T ss_pred EEEccCCCcEEEEEECCCCEEeec---ccc-CcEEEEEEcCCCCEEEEEEeccc-------------eeccccEEEEEe-
Confidence 88754 6799999997644322 223 34789999999999998653211 235777888886
Q ss_pred CCeEEeee
Q psy15157 273 SSKCVATF 280 (344)
Q Consensus 273 ~~~~~~~~ 280 (344)
.|+.+...
T Consensus 179 ~G~~l~~~ 186 (194)
T PF08662_consen 179 QGRLLYKK 186 (194)
T ss_pred cCeEeEec
Confidence 45555443
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-11 Score=110.99 Aligned_cols=189 Identities=17% Similarity=0.179 Sum_probs=126.2
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
...+..|...+.+.+|+|||+.++..+.+ ..|.+||+.++. ...+..+.+...+.+|+
T Consensus 196 ~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~-------------------~~~l~~~~g~~~~~~~S 256 (433)
T PRK04922 196 PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ-------------------RELVASFRGINGAPSFS 256 (433)
T ss_pred ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC-------------------EEEeccCCCCccCceEC
Confidence 34456778889999999999999987743 469999986421 11222333445578999
Q ss_pred CCCCEEE-EEeCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-CCEEEE---------------
Q psy15157 189 PSAPILA-SGSKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRL--------------- 249 (344)
Q Consensus 189 ~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~--------------- 249 (344)
|+|+.|+ +.+.+| .|++||+.+++.... ..+.......+|+|+|++++.++. ++...+
T Consensus 257 pDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~l---t~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~ 333 (433)
T PRK04922 257 PDGRRLALTLSRDGNPEIYVMDLGSRQLTRL---TNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTF 333 (433)
T ss_pred CCCCEEEEEEeCCCCceEEEEECCCCCeEEC---ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeec
Confidence 9998664 556665 599999988754322 223333466899999998887653 222222
Q ss_pred ---------EcCCCCEEEEEeCCC---cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC---CcEEEEE
Q psy15157 250 ---------YSSDGRIYCSGSKDG---DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD---SLVKLWE 314 (344)
Q Consensus 250 ---------~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d---g~i~vwd 314 (344)
|+|+|++++..+.++ .|.+||+.+++.. .+.... ......|+|||++|+..+.+ +.|++++
T Consensus 334 ~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~---~~~~p~~spdG~~i~~~s~~~g~~~L~~~~ 409 (433)
T PRK04922 334 QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGS---LDESPSFAPNGSMVLYATREGGRGVLAAVS 409 (433)
T ss_pred CCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCC---CCCCceECCCCCEEEEEEecCCceEEEEEE
Confidence 488999988765443 5999999888755 332221 24567899999988776653 4588888
Q ss_pred cCCCeeEEEeecC
Q psy15157 315 LSSARCLIAYTGA 327 (344)
Q Consensus 315 ~~~~~~~~~~~~~ 327 (344)
+. |.....+..+
T Consensus 410 ~~-g~~~~~l~~~ 421 (433)
T PRK04922 410 TD-GRVRQRLVSA 421 (433)
T ss_pred CC-CCceEEcccC
Confidence 84 4445555543
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.6e-12 Score=111.01 Aligned_cols=148 Identities=23% Similarity=0.395 Sum_probs=116.3
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceee--eccccceEEEEEecCCC-EEEEEeCCCEEEEE--------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKT--IQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~-------------- 250 (344)
.|.+--++.|-.-|.|++.|.......+.+.. ......++|+.|-|.++ .++++-.+|.+.+|
T Consensus 182 ~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~ 261 (636)
T KOG2394|consen 182 TPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQ 261 (636)
T ss_pred CCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCccc
Confidence 34566678888889999998766433222211 12346799999999554 45556667777665
Q ss_pred -------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEE
Q psy15157 251 -------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLT 293 (344)
Q Consensus 251 -------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~ 293 (344)
++||++||+.+.||.+||||..+.+.+...+... +...|++
T Consensus 262 ~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYF--GGLLCvc 339 (636)
T KOG2394|consen 262 ALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYF--GGLLCVC 339 (636)
T ss_pred ccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhc--cceEEEE
Confidence 7899999999999999999999988877776444 2489999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeee
Q psy15157 294 FTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 294 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 337 (344)
|+|||+||++|++|..|.||.+..++.+..-.||.+=...+.|.
T Consensus 340 WSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 340 WSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred EcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 99999999999999999999999999999988998777776664
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-12 Score=120.07 Aligned_cols=192 Identities=21% Similarity=0.240 Sum_probs=129.4
Q ss_pred CCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE-------ecCCcCCeEEEEEcC
Q psy15157 119 KSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT-------LYDHIEEVTCLEFHP 189 (344)
Q Consensus 119 ~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~h~~~v~~~~~~~ 189 (344)
...|+.+.+-. |..++++|+.||.|+||+--... ....+.+.. +.+-.+.-.-++|..
T Consensus 1109 ~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~-------------~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ 1175 (1387)
T KOG1517|consen 1109 DTRVSDLELINEQDDALLLTASSDGVIRIWKDYADK-------------WKKPELVTAWSSLSDQLPGARGTGLVVDWQQ 1175 (1387)
T ss_pred CCccceeeeecccchhheeeeccCceEEEecccccc-------------cCCceeEEeeccccccCccCCCCCeeeehhh
Confidence 34688888754 55699999999999999752110 011111111 112222224567888
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~------------------ 250 (344)
...+|++++.-..|+|||.........+.. +....++++.-+- .|+.+++|..||.+++|
T Consensus 1176 ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~-~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~ 1254 (1387)
T KOG1517|consen 1176 QSGHLLVTGDVRSIRIWDAHKEQVVADIPY-GSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHN 1254 (1387)
T ss_pred hCCeEEecCCeeEEEEEecccceeEeeccc-CCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccC
Confidence 777777777789999999988655444432 2445567665443 47999999999999998
Q ss_pred ----------cCCCC-EEEEEeCCCcEEEEeCCCCeEE--eeecccCC-CccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 ----------SSDGR-IYCSGSKDGDIKIWDGVSSKCV--ATFSKAHD-GAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ----------~~~~~-~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~-~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.+.|- .+++|+.||.|++||++..... ..+..+.+ ++.++++..+++...+++|+. +.|+||++
T Consensus 1255 ~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~- 1332 (1387)
T KOG1517|consen 1255 DVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL- 1332 (1387)
T ss_pred CcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEec-
Confidence 12222 4889999999999999984222 12221111 234899999999999999998 99999999
Q ss_pred CCeeEEEeec
Q psy15157 317 SARCLIAYTG 326 (344)
Q Consensus 317 ~~~~~~~~~~ 326 (344)
.|+.+..++.
T Consensus 1333 ~G~~l~~~k~ 1342 (1387)
T KOG1517|consen 1333 SGEQLNIIKY 1342 (1387)
T ss_pred Chhhhccccc
Confidence 5555555543
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=104.70 Aligned_cols=191 Identities=13% Similarity=0.197 Sum_probs=134.6
Q ss_pred ecCCCceEEEEECCCC-----CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-
Q psy15157 116 TSHKSPCRAGAFSIDG-----QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP- 189 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~-----~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~- 189 (344)
..|.-+++.+.|.|+. ++|||.+ ..+|+|.+.......... ..-....-..+..++++..|+.
T Consensus 93 fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~---------~~L~~~kns~~~aPlTSFDWne~ 161 (364)
T KOG0290|consen 93 FDHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQ---------SVLNNNKNSEFCAPLTSFDWNEV 161 (364)
T ss_pred CCCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehh---------hhhccCcccccCCcccccccccC
Confidence 4788999999999975 3677754 479999986321100000 0000011234667899999988
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcc-ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEE
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSV-RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i 268 (344)
+-+++.+++-|-+..|||+.++.. ...-....|...|..++|...+. ..|++.+.||.+|+
T Consensus 162 dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~------------------~~FASvgaDGSvRm 223 (364)
T KOG0290|consen 162 DPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSR------------------DVFASVGADGSVRM 223 (364)
T ss_pred CcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCcc------------------ceEEEecCCCcEEE
Confidence 556899999999999999998732 11234467899999999988543 34558999999999
Q ss_pred EeCCCCeEEeeecccCC-CccEEEEEEcc-CCCEEEEEeCC-CcEEEEEcCC-CeeEEEeecCCCcCceee
Q psy15157 269 WDGVSSKCVATFSKAHD-GAEISSLTFTR-NGKYLLSSGKD-SLVKLWELSS-ARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 269 wd~~~~~~~~~~~~~~~-~~~v~~i~~~~-~~~~l~s~~~d-g~i~vwd~~~-~~~~~~~~~~~~~~~~~~ 335 (344)
||++..+.-..+..... ..+...++|++ |-+|+++-..| ..|.|.|+|. ...+..+++|++....++
T Consensus 224 FDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIa 294 (364)
T KOG0290|consen 224 FDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIA 294 (364)
T ss_pred EEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceE
Confidence 99998765544432222 34688999998 56678876554 5699999997 467889999987766544
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-11 Score=109.73 Aligned_cols=187 Identities=15% Similarity=0.143 Sum_probs=126.6
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
...+..|...+.+.+|+|||+.|+..+. +..|.+||+.++ . ...+..+.+.+...+|+
T Consensus 194 ~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g------------------~-~~~l~~~~g~~~~~~~S 254 (435)
T PRK05137 194 VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETG------------------Q-RELVGNFPGMTFAPRFS 254 (435)
T ss_pred cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCC------------------c-EEEeecCCCcccCcEEC
Confidence 3456788889999999999998888764 467999998642 1 12334455667788999
Q ss_pred CCCCEEE-EEeCCCc--EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-CC--EEEE-------------
Q psy15157 189 PSAPILA-SGSKDKT--VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HF--VLRL------------- 249 (344)
Q Consensus 189 ~~~~~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~------------- 249 (344)
|+|+.|+ +.+.++. |.+||+.++.... ...+........|+|+|+.++..+. ++ .+.+
T Consensus 255 PDG~~la~~~~~~g~~~Iy~~d~~~~~~~~---Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~ 331 (435)
T PRK05137 255 PDGRKVVMSLSQGGNTDIYTMDLRSGTTTR---LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISF 331 (435)
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCceEE---ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeec
Confidence 9998664 6666665 7777887765432 2223344567899999998887653 22 2222
Q ss_pred ---------EcCCCCEEEEEeCC---CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC------CcEE
Q psy15157 250 ---------YSSDGRIYCSGSKD---GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD------SLVK 311 (344)
Q Consensus 250 ---------~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d------g~i~ 311 (344)
|+|+|+.++..+.+ ..|.+||...+.. ..+... ..+..+.|+|||+.|+..+.+ ..++
T Consensus 332 ~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~~---~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~ 407 (435)
T PRK05137 332 GGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTSG---FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLY 407 (435)
T ss_pred CCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccCC---CCCCCCeECCCCCEEEEEEccCCCCCcceEE
Confidence 58999998876644 3588889765543 333322 236678999999998765432 3588
Q ss_pred EEEcCCCeeEEEee
Q psy15157 312 LWELSSARCLIAYT 325 (344)
Q Consensus 312 vwd~~~~~~~~~~~ 325 (344)
++|+..+.. ..+.
T Consensus 408 ~~dl~g~~~-~~l~ 420 (435)
T PRK05137 408 TVDLTGRNE-REVP 420 (435)
T ss_pred EEECCCCce-EEcc
Confidence 888866544 4444
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.9e-12 Score=110.08 Aligned_cols=177 Identities=16% Similarity=0.191 Sum_probs=136.4
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE------cC-------------
Q psy15157 129 IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF------HP------------- 189 (344)
Q Consensus 129 ~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~------~~------------- 189 (344)
|-..|+|....||.++||++.+......+.+.. . -.+..++..| +|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~------------~---~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s 67 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA------------S---LSGTCTYTKWGLSADYSPMKWLSLEKAKKAS 67 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccch------------h---ccCcceeEEEEEEeccchHHHHhHHHHhhcc
Confidence 456799999999999999997543322221111 0 1112222222 22
Q ss_pred -CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEE
Q psy15157 190 -SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 190 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i 268 (344)
+-..++-|...|.|.+|++..++....+....|.+.|.++.++.+-. .|.+++.|+.+..
T Consensus 68 ~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~-------------------ciyS~~ad~~v~~ 128 (541)
T KOG4547|consen 68 LDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLG-------------------CIYSVGADLKVVY 128 (541)
T ss_pred CCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccC-------------------ceEecCCceeEEE
Confidence 33378889999999999999998888887788999999998877444 4447888999999
Q ss_pred EeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|+...++.++.+..... .+.+++.+|||..+++++ +.|++||+.+++.+..|+||++..+.+.|...+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~--~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~ 199 (541)
T KOG4547|consen 129 ILEKEKVIIRIWKEQKP--LVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGI 199 (541)
T ss_pred EecccceeeeeeccCCC--ccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEecccc
Confidence 99999998888874443 589999999999999887 689999999999999999999999999998876653
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.8e-12 Score=100.50 Aligned_cols=164 Identities=12% Similarity=0.146 Sum_probs=120.0
Q ss_pred cCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcc--ccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE-
Q psy15157 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSV--RKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY- 250 (344)
Q Consensus 176 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~- 250 (344)
.+|.+-|.++.|.+.|+.+++|+.|++|+|||.++... .....-..|.+.|..+.|.+ -|+.+++++.|+++.+|
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 46888999999999999999999999999999765432 22333345788899999975 48999999999999999
Q ss_pred ---------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeE------Eeeec-----ccCCC
Q psy15157 251 ---------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKC------VATFS-----KAHDG 286 (344)
Q Consensus 251 ---------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~-----~~~~~ 286 (344)
..-|-.+++++.||.+|||+.-.... ...+. .+...
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 23467899999999999998654322 22222 11122
Q ss_pred ccEEEEEEccC---CCEEEEEeCC-----CcEEEEEcCCCe----eEEEeecCCCcCceeeeeee
Q psy15157 287 AEISSLTFTRN---GKYLLSSGKD-----SLVKLWELSSAR----CLIAYTGAGSMGQQFELTLT 339 (344)
Q Consensus 287 ~~v~~i~~~~~---~~~l~s~~~d-----g~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~ 339 (344)
.+..|+.|+|. ..+|+.|+++ +.++||....+. .+.++.+|+.+.+.+++.-+
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn 234 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPN 234 (361)
T ss_pred CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccc
Confidence 35789999973 4568888766 478999876542 34566777777666555433
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.6e-12 Score=116.54 Aligned_cols=186 Identities=18% Similarity=0.249 Sum_probs=130.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--CCCEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--SAPIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l 194 (344)
+...+...+.|+|-...++++...-.|+|||.+.+.....++.. ......|+.+.+-. |..++
T Consensus 1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~---------------~~~~t~Vs~l~liNe~D~aLl 1126 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNG---------------AFPDTRVSDLELINEQDDALL 1126 (1387)
T ss_pred cCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCC---------------CCCCCccceeeeecccchhhe
Confidence 44456778889998899999987788999999754332222210 12345688888865 44589
Q ss_pred EEEeCCCcEEEEEcCCC-----cccccee------eeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------
Q psy15157 195 ASGSKDKTVKMFDYSKS-----SVRKAHK------TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~-----~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------- 250 (344)
++|+.||.|+||+--.. +...... ....... .-+.|..+..+|+++++-..|++|
T Consensus 1127 Ltas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~-~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~ 1205 (1387)
T KOG1517|consen 1127 LTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTG-LVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPY 1205 (1387)
T ss_pred eeeccCceEEEecccccccCCceeEEeeccccccCccCCCCC-eeeehhhhCCeEEecCCeeEEEEEecccceeEeeccc
Confidence 99999999999973221 1111110 0011111 446788888888888889999999
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeE---EeeecccCCCccEEEEEEccCCCE-EEEEeCCCcEEEEE
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKC---VATFSKAHDGAEISSLTFTRNGKY-LLSSGKDSLVKLWE 314 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~i~~~~~~~~-l~s~~~dg~i~vwd 314 (344)
...|+.+++|..||.|++||.+.... +...+.+....+|..+.+.+.|-- |++|+.||.|++||
T Consensus 1206 ~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~D 1285 (1387)
T KOG1517|consen 1206 GSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLD 1285 (1387)
T ss_pred CCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEe
Confidence 24589999999999999999886533 344443332234899999887655 99999999999999
Q ss_pred cCCC
Q psy15157 315 LSSA 318 (344)
Q Consensus 315 ~~~~ 318 (344)
++..
T Consensus 1286 lR~~ 1289 (1387)
T KOG1517|consen 1286 LRMS 1289 (1387)
T ss_pred cccC
Confidence 9984
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.5e-12 Score=113.89 Aligned_cols=172 Identities=16% Similarity=0.165 Sum_probs=113.2
Q ss_pred CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCccccc
Q psy15157 140 DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD---KTVKMFDYSKSSVRKA 216 (344)
Q Consensus 140 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~ 216 (344)
+..|.+||.+. .....+..|...+.+.+|+|+|+.|+.++.+ ..|++||+.+++....
T Consensus 183 ~~~i~i~d~dg-------------------~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l 243 (429)
T PRK01742 183 PYEVRVADYDG-------------------FNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV 243 (429)
T ss_pred eEEEEEECCCC-------------------CCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE
Confidence 46899999852 1134566788889999999999988877654 3699999988753222
Q ss_pred eeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE------------------------cCCCCEEEEEe-CCCcEEEEe
Q psy15157 217 HKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY------------------------SSDGRIYCSGS-KDGDIKIWD 270 (344)
Q Consensus 217 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~------------------------~~~~~~l~~~~-~dg~i~iwd 270 (344)
... ......++|+|+|+.|+++. .++...+| +|+|+.++..+ .+|..+||+
T Consensus 244 ~~~---~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~ 320 (429)
T PRK01742 244 ASF---RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYR 320 (429)
T ss_pred ecC---CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEE
Confidence 211 12234689999999988764 56665554 78898766554 578888887
Q ss_pred CCCC-eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 271 GVSS-KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 271 ~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+... .....+ .+. . ....|+|||++|+..+.++ +.+||+.+++........ ......+++|++
T Consensus 321 ~~~~~~~~~~l--~~~-~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~----~~~~~~~sPdG~ 384 (429)
T PRK01742 321 MSASGGGASLV--GGR-G--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF----LDESPSISPNGI 384 (429)
T ss_pred EECCCCCeEEe--cCC-C--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC----CCCCceECCCCC
Confidence 6432 222222 222 1 3568999999998887755 666999988764322221 123445666654
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.5e-11 Score=97.91 Aligned_cols=169 Identities=16% Similarity=0.192 Sum_probs=108.3
Q ss_pred cCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 117 SHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 117 ~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
..+..|+|++|-|. +.-|+.|...| |.||............ .........+..-.+| ..|+++.|.+||..++
T Consensus 138 ~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~----~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~ 211 (445)
T KOG2139|consen 138 VSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNI----RMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILV 211 (445)
T ss_pred hhhcceeEEEeccCCcceeeeeecce-eEEEEcCccccccccc----ccccccchhheeCCCC-ceeeEEEEcCCCCEEe
Confidence 34568999999995 45777777655 9999886432211100 0001112223334455 6899999999999999
Q ss_pred EEeC-CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 196 SGSK-DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 196 s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
+++. |..|.|||..++...... ....+.+.-+.|+|+|.+++ ++.-|+..++|+....
T Consensus 212 tAS~gsssi~iWdpdtg~~~pL~--~~glgg~slLkwSPdgd~lf-------------------aAt~davfrlw~e~q~ 270 (445)
T KOG2139|consen 212 TASFGSSSIMIWDPDTGQKIPLI--PKGLGGFSLLKWSPDGDVLF-------------------AATCDAVFRLWQENQS 270 (445)
T ss_pred ecccCcceEEEEcCCCCCccccc--ccCCCceeeEEEcCCCCEEE-------------------Eecccceeeeehhccc
Confidence 8876 578999999998765443 23445577788888665555 6778888999954433
Q ss_pred eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
.......... +.|...+|+|+|++|+-.+ .|.-++|.+
T Consensus 271 wt~erw~lgs--grvqtacWspcGsfLLf~~-sgsp~lysl 308 (445)
T KOG2139|consen 271 WTKERWILGS--GRVQTACWSPCGSFLLFAC-SGSPRLYSL 308 (445)
T ss_pred ceecceeccC--CceeeeeecCCCCEEEEEE-cCCceEEEE
Confidence 2222222122 2699999999999865544 233344444
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-12 Score=113.87 Aligned_cols=143 Identities=23% Similarity=0.428 Sum_probs=113.3
Q ss_pred EEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEE
Q psy15157 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRL 249 (344)
Q Consensus 172 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~ 249 (344)
...+.||++-|++++|+.+|.+|+||+.|-.+.|||.-..+....+. .+|...|-++.|-| +.+.+++|..|..|++
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~-TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSIS-TGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeee-cccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 45678999999999999999999999999999999988665554444 46888899999998 5678899999999999
Q ss_pred E---------------------------------cCCC-CEEEEEeCCCcEEEEeCCCCe-------EEeeecccC-CCc
Q psy15157 250 Y---------------------------------SSDG-RIYCSGSKDGDIKIWDGVSSK-------CVATFSKAH-DGA 287 (344)
Q Consensus 250 ~---------------------------------~~~~-~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~-~~~ 287 (344)
| .|++ +.+.+++.||+|+-+|++... +...+...+ .--
T Consensus 122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li 201 (758)
T KOG1310|consen 122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI 201 (758)
T ss_pred EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence 8 3444 788999999999999998632 111111111 112
Q ss_pred cEEEEEEcc-CCCEEEEEeCCCcEEEEEc
Q psy15157 288 EISSLTFTR-NGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 288 ~v~~i~~~~-~~~~l~s~~~dg~i~vwd~ 315 (344)
...++..+| +..+|++|+.|-..++||.
T Consensus 202 elk~ltisp~rp~~laVGgsdpfarLYD~ 230 (758)
T KOG1310|consen 202 ELKCLTISPSRPYYLAVGGSDPFARLYDR 230 (758)
T ss_pred eeeeeeecCCCCceEEecCCCchhhhhhh
Confidence 467899999 4567899999999999994
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.1e-10 Score=100.70 Aligned_cols=197 Identities=16% Similarity=0.210 Sum_probs=125.9
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+......-..+.|++||+++++++.||.|.++|+.+ .+.+.++..-. ...+++++++|++
T Consensus 31 ~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~------------------~~~v~~i~~G~-~~~~i~~s~DG~~ 91 (369)
T PF02239_consen 31 RIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLAT------------------GKVVATIKVGG-NPRGIAVSPDGKY 91 (369)
T ss_dssp EEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTS------------------SSEEEEEE-SS-EEEEEEE--TTTE
T ss_pred EEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCc------------------ccEEEEEecCC-CcceEEEcCCCCE
Confidence 3443333344578999999999999999999999964 34555665433 4578999999998
Q ss_pred EEEEe-CCCcEEEEEcCCCccccceeee-------------------------------------------------ccc
Q psy15157 194 LASGS-KDKTVKMFDYSKSSVRKAHKTI-------------------------------------------------QES 223 (344)
Q Consensus 194 l~s~~-~dg~i~iwd~~~~~~~~~~~~~-------------------------------------------------~~~ 223 (344)
++++. .++.+.++|..+.+....+... ...
T Consensus 92 ~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g 171 (369)
T PF02239_consen 92 VYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVG 171 (369)
T ss_dssp EEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--
T ss_pred EEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccc
Confidence 87665 6899999998775443322110 001
Q ss_pred cceEEEEEecCCCEEEEEe-CCCEEEEE----------------------------------------------------
Q psy15157 224 TFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------------------------------------------- 250 (344)
Q Consensus 224 ~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------------------------------------------- 250 (344)
.......|+|+++|++++. .++.+.++
T Consensus 172 ~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v 251 (369)
T PF02239_consen 172 RFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPV 251 (369)
T ss_dssp TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TT
T ss_pred ccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCcc
Confidence 1234567788888776642 22233222
Q ss_pred -------------------------cCCCCEEEEE----eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 251 -------------------------SSDGRIYCSG----SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 251 -------------------------~~~~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+|+++++++. ...+.|.++|.++.+.+..+..... ..+..+.|+++|+++
T Consensus 252 ~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~-~~~~h~ef~~dG~~v 330 (369)
T PF02239_consen 252 SVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPG-KRVVHMEFNPDGKEV 330 (369)
T ss_dssp T-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT---EEEEEE-TTSSEE
T ss_pred ccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCC-CcEeccEECCCCCEE
Confidence 7899999887 4558899999999988888763332 348999999999988
Q ss_pred EEEeCC--CcEEEEEcCCCeeEEEeecCCCc
Q psy15157 302 LSSGKD--SLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 302 ~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
..+..+ +.|.+||..+.+.+..++.....
T Consensus 331 ~vS~~~~~~~i~v~D~~Tl~~~~~i~~~tP~ 361 (369)
T PF02239_consen 331 WVSVWDGNGAIVVYDAKTLKEKKRIPVPTPT 361 (369)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEEEE--SEE
T ss_pred EEEEecCCCEEEEEECCCcEEEEEEEeeCCC
Confidence 766544 36999999999999999854433
|
... |
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.5e-12 Score=116.40 Aligned_cols=152 Identities=20% Similarity=0.281 Sum_probs=122.0
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 125 GAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204 (344)
Q Consensus 125 ~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 204 (344)
+.++++.-++++|+.-+.|.+|+... ...+. .+.+|.+.|.++.|+-+|.+++++|.|++++
T Consensus 139 ~g~s~~~~~i~~gsv~~~iivW~~~~-----------------dn~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiR 200 (967)
T KOG0974|consen 139 IGDSAEELYIASGSVFGEIIVWKPHE-----------------DNKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIR 200 (967)
T ss_pred EeccCcEEEEEeccccccEEEEeccc-----------------cCCcc-eecccCCceEEEEEccCCcEEEEEecCccee
Confidence 34566777999999999999999851 11122 6789999999999999999999999999999
Q ss_pred EEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC
Q psy15157 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284 (344)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 284 (344)
+|++.+.+... ....+|...++.++|+|+ .++ +++.|.+.++|+.. +.....+. .|
T Consensus 201 lW~i~s~~~~~-~~~fgHsaRvw~~~~~~n--~i~-------------------t~gedctcrvW~~~-~~~l~~y~-~h 256 (967)
T KOG0974|consen 201 LWPIDSREVLG-CTGFGHSARVWACCFLPN--RII-------------------TVGEDCTCRVWGVN-GTQLEVYD-EH 256 (967)
T ss_pred eeecccccccC-cccccccceeEEEEeccc--eeE-------------------EeccceEEEEEecc-cceehhhh-hh
Confidence 99999987655 234678999999999885 444 77888888888644 33344555 45
Q ss_pred CCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 285 DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 285 ~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
.+..|..++..++...++|++.||.+++||+...
T Consensus 257 ~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 257 SGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred hhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 5567999999999999999999999999998653
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-11 Score=100.89 Aligned_cols=198 Identities=18% Similarity=0.310 Sum_probs=136.4
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC------------cCCeEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH------------IEEVTCL 185 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h------------~~~v~~~ 185 (344)
..+-|.++.|...|.+||||..+|.|.+|.-+.... ........++.| ...|+.+
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~-------------~ey~~~t~fqshepEFDYLkSleieEKinkI 90 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYK-------------GEYNFQTEFQSHEPEFDYLKSLEIEEKINKI 90 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccc-------------cceeeeeeeeccCcccchhhhhhhhhhhhhc
Confidence 345789999999999999999999999997653211 011122233333 3468899
Q ss_pred EEcCCCC--EEEEEeCCCcEEEEEcCCCcccc------------------ce----------------eeeccccceEEE
Q psy15157 186 EFHPSAP--ILASGSKDKTVKMFDYSKSSVRK------------------AH----------------KTIQESTFVRCL 229 (344)
Q Consensus 186 ~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~------------------~~----------------~~~~~~~~v~~~ 229 (344)
.|.++++ .++..+.|.+|++|-+....... .. -...|..-|.++
T Consensus 91 rw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSI 170 (433)
T KOG1354|consen 91 RWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSI 170 (433)
T ss_pred eecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeee
Confidence 9998765 67778889999999976543211 00 012355668899
Q ss_pred EEecCCCEEEEEeCCCEEEEE-------------------------------c-CCCCEEEEEeCCCcEEEEeCCCCeEE
Q psy15157 230 SFHPCGDYMVVGTDHFVLRLY-------------------------------S-SDGRIYCSGSKDGDIKIWDGVSSKCV 277 (344)
Q Consensus 230 ~~~~~~~~l~~~~~~~~i~~~-------------------------------~-~~~~~l~~~~~dg~i~iwd~~~~~~~ 277 (344)
.++.|+..++++ +|-.|.+| + ...+.++-.+..|+|++.|++....-
T Consensus 171 S~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLC 249 (433)
T KOG1354|consen 171 SVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALC 249 (433)
T ss_pred eecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhh
Confidence 999988887764 56778888 2 23567788899999999999854211
Q ss_pred e----eeccc---CC-------CccEEEEEEccCCCEEEEEeCCCcEEEEEc-CCCeeEEEeecCCCc
Q psy15157 278 A----TFSKA---HD-------GAEISSLTFTRNGKYLLSSGKDSLVKLWEL-SSARCLIAYTGAGSM 330 (344)
Q Consensus 278 ~----~~~~~---~~-------~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~-~~~~~~~~~~~~~~~ 330 (344)
- .+... .. -+.|..+.|+++|+|+++-+ --+|++||+ ...+++.+++-|...
T Consensus 250 d~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~l 316 (433)
T KOG1354|consen 250 DAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYL 316 (433)
T ss_pred cchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhH
Confidence 0 11100 00 13588999999999999865 367999999 557788888776443
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.9e-11 Score=106.67 Aligned_cols=197 Identities=19% Similarity=0.283 Sum_probs=142.4
Q ss_pred cCCCceEEEEECCCCCE-EEEEeCCCeEEEEEcCCcccccc--CCCCC--------------------------------
Q psy15157 117 SHKSPCRAGAFSIDGQL-CATGSVDASIKILDVDRMLAKSS--MESSE-------------------------------- 161 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~-l~sg~~dg~v~iwd~~~~~~~~~--~~~~~-------------------------------- 161 (344)
+|....+.|..+|||+| +|||.+--.|++||+.+...... .+...
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 67888899999999996 56677888999999965321110 00000
Q ss_pred -----------------------------CcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q psy15157 162 -----------------------------PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS 212 (344)
Q Consensus 162 -----------------------------~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 212 (344)
...+...+..+..+....+.+++|..++-..+|++|+.+|.|..||.++..
T Consensus 129 ~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ks 208 (703)
T KOG2321|consen 129 RTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKS 208 (703)
T ss_pred eeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhh
Confidence 001122233344444456789999999999999999999999999998865
Q ss_pred cccceeeec----c-----ccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------------C-CCCEE
Q psy15157 213 VRKAHKTIQ----E-----STFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------------S-DGRIY 257 (344)
Q Consensus 213 ~~~~~~~~~----~-----~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------------~-~~~~l 257 (344)
....+.... + ...|+++.|+.+|-.+++|+..|.+.+|+ . ++..+
T Consensus 209 rv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v 288 (703)
T KOG2321|consen 209 RVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKV 288 (703)
T ss_pred hheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceE
Confidence 443332211 1 23489999999999999999999999982 1 23344
Q ss_pred EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 258 CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
++ .....++|||-.+|+....+.... .++.+|+-|++-.++++-+++.+..|-+..
T Consensus 289 ~S-~Dk~~~kiWd~~~Gk~~asiEpt~---~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 289 VS-MDKRILKIWDECTGKPMASIEPTS---DLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred Ee-cchHHhhhcccccCCceeeccccC---CcCceeeecCCceEEEecCCCcceeEEccc
Confidence 33 445679999999999988886433 489999999999999999988887776654
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=3e-11 Score=99.81 Aligned_cols=156 Identities=20% Similarity=0.307 Sum_probs=111.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCC-EEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAP-ILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~s 196 (344)
...++.++|++.-..+|++..|-.|++|+-.. .....++ .-...|+|++|-|.+. .|+.
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-------------------t~pt~Lks~sQrnvtclawRPlsaselav 158 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-------------------TCPTKLKSVSQRNVTCLAWRPLSASELAV 158 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCC-------------------CCCceecchhhcceeEEEeccCCcceeee
Confidence 34678889998777899999999999998652 1111222 2345799999999765 5666
Q ss_pred EeCCCcEEEEEcCCCcc------------ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC
Q psy15157 197 GSKDKTVKMFDYSKSSV------------RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG 264 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg 264 (344)
|+. +-|++|....... ...++ .....+|++++|+++|..++++ .-.|.
T Consensus 159 gCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl~-~pgh~pVtsmqwn~dgt~l~tA------------------S~gss 218 (445)
T KOG2139|consen 159 GCR-AGICIWSDSRTLNANRNIRMMSTHHLQVLQ-DPGHNPVTSMQWNEDGTILVTA------------------SFGSS 218 (445)
T ss_pred eec-ceeEEEEcCcccccccccccccccchhhee-CCCCceeeEEEEcCCCCEEeec------------------ccCcc
Confidence 654 6699998653211 11112 2234678999999877666643 23456
Q ss_pred cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
.|.|||..++..+....... +.++-+.|+|||.+|+++.-|+..++|+.
T Consensus 219 si~iWdpdtg~~~pL~~~gl--gg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 219 SIMIWDPDTGQKIPLIPKGL--GGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred eEEEEcCCCCCcccccccCC--CceeeEEEcCCCCEEEEecccceeeeehh
Confidence 79999999998776553222 35889999999999999999999999944
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=99.77 Aligned_cols=138 Identities=14% Similarity=0.265 Sum_probs=97.6
Q ss_pred EEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCE-----
Q psy15157 173 RTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV----- 246 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~----- 246 (344)
..+..-...+.+++|+|+|+ +|.+...|-.|.+|.+.+.+. .........+..++|+|+|++.+.++.-..
T Consensus 85 ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~---~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~ 161 (447)
T KOG4497|consen 85 CKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG---YLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQ 161 (447)
T ss_pred EEeccCCCcceeeeECCCcceEeeeecceeEEEEEEecccee---EEecccccCceeEEECCCCceeeeeecccHHHHHH
Confidence 34555667899999999996 666777899999999988643 222223445688999999999998764211
Q ss_pred ---------------------EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 247 ---------------------LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 247 ---------------------i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
-.-|+|||..++ +||.--.-.+.... .+-.+..+.|+|.+++|+.|+
T Consensus 162 i~~c~~W~ll~~f~~dT~DltgieWsPdg~~la---------Vwd~~Leykv~aYe---~~lG~k~v~wsP~~qflavGs 229 (447)
T KOG4497|consen 162 ISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLA---------VWDNVLEYKVYAYE---RGLGLKFVEWSPCNQFLAVGS 229 (447)
T ss_pred HHhhHHHHHHHhcCCCcccccCceECCCCcEEE---------Eecchhhheeeeee---eccceeEEEeccccceEEeec
Confidence 112577777665 57643333332332 223489999999999999999
Q ss_pred CCCcEEEEEcCCCeeEEEee
Q psy15157 306 KDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 306 ~dg~i~vwd~~~~~~~~~~~ 325 (344)
.|+.+|+-+--+-+.+..|-
T Consensus 230 yD~~lrvlnh~tWk~f~efl 249 (447)
T KOG4497|consen 230 YDQMLRVLNHFTWKPFGEFL 249 (447)
T ss_pred cchhhhhhceeeeeehhhhc
Confidence 99999998777766665553
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=6e-12 Score=109.46 Aligned_cols=187 Identities=13% Similarity=0.142 Sum_probs=136.8
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.....+.||+..|+.++--.+.+-+++++.|.+|++|.++.. .....+..+..++..|+.+|.++.|-.
T Consensus 726 irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~E-----------gD~~~tsaCQfTY~aHkk~i~~igfL~ 794 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPE-----------GDEIGTSACQFTYQAHKKPIHDIGFLA 794 (1034)
T ss_pred eeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccc-----------cCccccceeeeEhhhccCcccceeeee
Confidence 344567899999999988778889999999999999999641 122234557788999999999999998
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEE-EeCCCcEEE
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCS-GSKDGDIKI 268 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~-~~~dg~i~i 268 (344)
+.+.+++ .||-|.+||.--++....+.-....+.+..+..-++ .+..++.. ++...+|++
T Consensus 795 ~lr~i~S--cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~n-----------------v~~~iliAgcsaeSTVKl 855 (1034)
T KOG4190|consen 795 DLRSIAS--CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLEN-----------------VDRHILIAGCSAESTVKL 855 (1034)
T ss_pred ccceeee--ccCcceeecccccchhHhhhcCcccCCCceeEeccc-----------------Ccchheeeeccchhhhee
Confidence 8877765 479999999766655443332222222333333332 12222223 477889999
Q ss_pred EeCCCCeEEeeeccc---CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 269 WDGVSSKCVATFSKA---HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 269 wd~~~~~~~~~~~~~---~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|.++++....++.. ..++.+.+++..+.|++++.+-.+|.|.+.|.++|+.+..++.
T Consensus 856 ~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrp 916 (1034)
T KOG4190|consen 856 FDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRP 916 (1034)
T ss_pred eecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCc
Confidence 999998877666522 1224589999999999999999999999999999998876654
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-12 Score=118.60 Aligned_cols=185 Identities=19% Similarity=0.239 Sum_probs=130.2
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.||.+.|+.++.+.+.-++|++|.|..|++|.+.. +.++..+.+|++.|++++|+|-.
T Consensus 226 As~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~------------------~~pvsvLrghtgavtaiafsP~~- 286 (1113)
T KOG0644|consen 226 ASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD------------------GAPVSVLRGHTGAVTAIAFSPRA- 286 (1113)
T ss_pred ccCCCCccccchhccchhhhhhhhcccCceEEEEecCC------------------CchHHHHhccccceeeeccCccc-
Confidence 44679999999999999999999999999999999853 56778899999999999999975
Q ss_pred EEEEEeCCCcEEEEEcCCCccccc---eeee-------------------------ccccceEEEEEecCCCEEEEEe--
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKA---HKTI-------------------------QESTFVRCLSFHPCGDYMVVGT-- 242 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~---~~~~-------------------------~~~~~v~~~~~~~~~~~l~~~~-- 242 (344)
+.+.||++++||.+-.-.... .... .......+++|...+-.++...
T Consensus 287 ---sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd 363 (1113)
T KOG0644|consen 287 ---SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSD 363 (1113)
T ss_pred ---cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEecccc
Confidence 778899999999871110000 0000 0001112222222222222222
Q ss_pred ---------CCCEEEEE-----------------------c-CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccE
Q psy15157 243 ---------DHFVLRLY-----------------------S-SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEI 289 (344)
Q Consensus 243 ---------~~~~i~~~-----------------------~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 289 (344)
.+..+.+| + -+.++..+++.||.+.|||+-.|.+++....+|. .+
T Consensus 364 ~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~--kl 441 (1113)
T KOG0644|consen 364 LSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHG--KL 441 (1113)
T ss_pred ccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccc--ee
Confidence 22233334 1 2334456889999999999999988877765543 57
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
...+|+++|..++...+-|.++|.....++..
T Consensus 442 ~d~kFSqdgts~~lsd~hgql~i~g~gqs~s~ 473 (1113)
T KOG0644|consen 442 VDGKFSQDGTSIALSDDHGQLYILGTGQSKSQ 473 (1113)
T ss_pred eccccCCCCceEecCCCCCceEEeccCCCccc
Confidence 78899999999999999999999887665543
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.8e-11 Score=96.94 Aligned_cols=169 Identities=18% Similarity=0.253 Sum_probs=121.4
Q ss_pred eEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 171 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
+...+++|.+.|+++.|..++. |.+|..-|.|++|++.+.+....+.. .+...|+.+.--|+ +.+.+-+.|..+.+|
T Consensus 6 P~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~-~g~~~it~lq~~p~-d~l~tqgRd~~L~lw 82 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRL-FGRLFITNLQSIPN-DSLDTQGRDPLLILW 82 (323)
T ss_pred CeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhh-hccceeeceeecCC-cchhhcCCCceEEEE
Confidence 4556779999999999988775 88999999999999988765444432 34556777766665 445555566666665
Q ss_pred -------------------------------------------------------------------------------c
Q psy15157 251 -------------------------------------------------------------------------------S 251 (344)
Q Consensus 251 -------------------------------------------------------------------------------~ 251 (344)
.
T Consensus 83 ~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c 162 (323)
T KOG0322|consen 83 TIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHAC 162 (323)
T ss_pred EccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccc
Confidence 0
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeec----------c-------------------------------cC------
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFS----------K-------------------------------AH------ 284 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----------~-------------------------------~~------ 284 (344)
..--++++|-++|.+.+||+.++..+..+. . .+
T Consensus 163 ~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq 242 (323)
T KOG0322|consen 163 GSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQ 242 (323)
T ss_pred cceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCccc
Confidence 111246678889999999998862211110 0 00
Q ss_pred -------CCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCCC
Q psy15157 285 -------DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDADV 344 (344)
Q Consensus 285 -------~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (344)
....|..+..-||++.++|+|.|+.||||..++.+++..++.|.+. ..++.|++|++|
T Consensus 243 ~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsag--vn~vAfspd~~l 307 (323)
T KOG0322|consen 243 IRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAG--VNAVAFSPDCEL 307 (323)
T ss_pred ccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcc--eeEEEeCCCCch
Confidence 0112677778889999999999999999999999999999999844 566677777654
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-11 Score=101.91 Aligned_cols=148 Identities=13% Similarity=0.173 Sum_probs=115.3
Q ss_pred EEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc---ce--eeeccccceEEEEEecCCCEEEEEeCCCE
Q psy15157 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK---AH--KTIQESTFVRCLSFHPCGDYMVVGTDHFV 246 (344)
Q Consensus 172 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 246 (344)
...+.+|.+-|+++.|+.++++|++|+.|..+++|.+...-..+ .+ ....|...|.|++|+..+.++++|..+++
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT 128 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcce
Confidence 34567899999999999999999999999999999986532111 11 22335578999999999999999999998
Q ss_pred EEEE-------------------------cCCCCEEEEEeCCCcEEEEeCCCCe-EEeeecccCCCccEEEEEEccC-CC
Q psy15157 247 LRLY-------------------------SSDGRIYCSGSKDGDIKIWDGVSSK-CVATFSKAHDGAEISSLTFTRN-GK 299 (344)
Q Consensus 247 i~~~-------------------------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~i~~~~~-~~ 299 (344)
+.+. +|..+.|++.+.++.|.+||.+... .+..+-.+..+....++-|+|. ..
T Consensus 129 VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~ 208 (609)
T KOG4227|consen 129 VIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPA 208 (609)
T ss_pred eEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCce
Confidence 8764 6778999999999999999998654 3222222333445788899995 55
Q ss_pred EEEEEeCCCcEEEEEcCCCe
Q psy15157 300 YLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 300 ~l~s~~~dg~i~vwd~~~~~ 319 (344)
+|++.+.-+-+-+||.+...
T Consensus 209 Li~~~~~~~G~~~~D~R~~~ 228 (609)
T KOG4227|consen 209 LILVNSETGGPNVFDRRMQA 228 (609)
T ss_pred eEEeccccCCCCceeecccc
Confidence 67888888999999998753
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.4e-09 Score=98.56 Aligned_cols=187 Identities=17% Similarity=0.204 Sum_probs=116.6
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCC-C--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVD-A--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~d-g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
.+..+...+.+..|||||+.|+..+.+ + .|.+||+.++. ...+..+ .+.....+|+|+
T Consensus 212 ~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~----------------~~~lt~~---~g~~~~~~wSPD 272 (448)
T PRK04792 212 MLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV----------------REKVTSF---PGINGAPRFSPD 272 (448)
T ss_pred EeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCC----------------eEEecCC---CCCcCCeeECCC
Confidence 344566778899999999988876543 3 57788875321 1112122 223346799999
Q ss_pred CCEEE-EEeCCCc--EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-CCEEEE-----------------
Q psy15157 191 APILA-SGSKDKT--VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRL----------------- 249 (344)
Q Consensus 191 ~~~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~----------------- 249 (344)
|+.|+ +.+.+|. |+++|+.+++.... ..+........|+|+|++++..+. ++...+
T Consensus 273 G~~La~~~~~~g~~~Iy~~dl~tg~~~~l---t~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g 349 (448)
T PRK04792 273 GKKLALVLSKDGQPEIYVVDIATKALTRI---TRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEG 349 (448)
T ss_pred CCEEEEEEeCCCCeEEEEEECCCCCeEEC---ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCC
Confidence 99665 5566675 77778877654322 123334567889999998876543 222222
Q ss_pred -------EcCCCCEEEEEeCC-C--cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC-CC--cEEEEEcC
Q psy15157 250 -------YSSDGRIYCSGSKD-G--DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK-DS--LVKLWELS 316 (344)
Q Consensus 250 -------~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-dg--~i~vwd~~ 316 (344)
|+|+|++++..+.+ + .|.++|+.+++... +.... ......|+|||+.|+..+. ++ .+++++.
T Consensus 350 ~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~~---~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~- 424 (448)
T PRK04792 350 EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTSTR---LDESPSVAPNGTMVIYSTTYQGKQVLAAVSI- 424 (448)
T ss_pred CCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCCC---CCCCceECCCCCEEEEEEecCCceEEEEEEC-
Confidence 47899888776553 3 46667888776533 32121 1224579999998876553 33 3777887
Q ss_pred CCeeEEEeecC
Q psy15157 317 SARCLIAYTGA 327 (344)
Q Consensus 317 ~~~~~~~~~~~ 327 (344)
+|+....+..+
T Consensus 425 ~G~~~~~l~~~ 435 (448)
T PRK04792 425 DGRFKARLPAG 435 (448)
T ss_pred CCCceEECcCC
Confidence 56666666554
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.9e-10 Score=100.22 Aligned_cols=161 Identities=16% Similarity=0.153 Sum_probs=104.1
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEE-EeCCCEEE
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKD---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV-GTDHFVLR 248 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i~ 248 (344)
+.+..+...+.+.+|+|+|+.|+..+.+ ..|.+||+.+++.... ........+..|+|+|+.++. .+.++...
T Consensus 189 ~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l---~~~~g~~~~~~~SPDG~~la~~~~~~g~~~ 265 (427)
T PRK02889 189 QSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV---ANFKGSNSAPAWSPDGRTLAVALSRDGNSQ 265 (427)
T ss_pred eEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe---ecCCCCccceEECCCCCEEEEEEccCCCce
Confidence 3445677789999999999988776643 3599999988754322 112234567899999998875 45566555
Q ss_pred EE------------------------cCCCCEEEEEeC-CCcEEEEe--CCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 249 LY------------------------SSDGRIYCSGSK-DGDIKIWD--GVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 249 ~~------------------------~~~~~~l~~~~~-dg~i~iwd--~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+| +|+|+.++..+. +|...+|. ..+++........ .......|+|||++|
T Consensus 266 Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g---~~~~~~~~SpDG~~I 342 (427)
T PRK02889 266 IYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTG---SYNTSPRISPDGKLL 342 (427)
T ss_pred EEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCC---CCcCceEECCCCCEE
Confidence 54 889998776554 45556664 4444432222111 224467899999999
Q ss_pred EEEeCCC---cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 302 LSSGKDS---LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 302 ~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..+.++ .|++||+.+++... +.... ......+++|+.
T Consensus 343 a~~s~~~g~~~I~v~d~~~g~~~~-lt~~~---~~~~p~~spdg~ 383 (427)
T PRK02889 343 AYISRVGGAFKLYVQDLATGQVTA-LTDTT---RDESPSFAPNGR 383 (427)
T ss_pred EEEEccCCcEEEEEEECCCCCeEE-ccCCC---CccCceECCCCC
Confidence 8776554 59999998887543 33221 123456666653
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.3e-09 Score=97.25 Aligned_cols=187 Identities=14% Similarity=0.151 Sum_probs=119.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..+..+...+...+|||||+.|+..+.+ ..|.+|++.++. ...+....+.+...+|+|
T Consensus 192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~-------------------~~~l~~~~g~~~~~~~Sp 252 (430)
T PRK00178 192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR-------------------REQITNFEGLNGAPAWSP 252 (430)
T ss_pred eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC-------------------EEEccCCCCCcCCeEECC
Confidence 3455677889999999999998876644 358888886421 112222233455689999
Q ss_pred CCCEEE-EEeCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-CC--EEEE--------------
Q psy15157 190 SAPILA-SGSKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HF--VLRL-------------- 249 (344)
Q Consensus 190 ~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~-------------- 249 (344)
+|+.|+ +.+.+| .|++||+.++..... ..+........|+|+|+.++..+. ++ .+..
T Consensus 253 DG~~la~~~~~~g~~~Iy~~d~~~~~~~~l---t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~ 329 (430)
T PRK00178 253 DGSKLAFVLSKDGNPEIYVMDLASRQLSRV---TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV 329 (430)
T ss_pred CCCEEEEEEccCCCceEEEEECCCCCeEEc---ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC
Confidence 998765 555555 588889987654321 122333556789999998876653 22 2222
Q ss_pred --------EcCCCCEEEEEeCCC---cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC---CcEEEEEc
Q psy15157 250 --------YSSDGRIYCSGSKDG---DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD---SLVKLWEL 315 (344)
Q Consensus 250 --------~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d---g~i~vwd~ 315 (344)
|+|+|+.++..+.++ .|.+||+.+++... +.... ......|+|||+.++..+.+ ..|+++++
T Consensus 330 ~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~~~---~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~ 405 (430)
T PRK00178 330 GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTDTS---LDESPSVAPNGTMLIYATRQQGRGVLMLVSI 405 (430)
T ss_pred CCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccCCC---CCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 478999888766542 48889998876533 32221 12345899999998776543 34777787
Q ss_pred CCCeeEEEeec
Q psy15157 316 SSARCLIAYTG 326 (344)
Q Consensus 316 ~~~~~~~~~~~ 326 (344)
. |.....+..
T Consensus 406 ~-g~~~~~l~~ 415 (430)
T PRK00178 406 N-GRVRLPLPT 415 (430)
T ss_pred C-CCceEECcC
Confidence 4 444444543
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.6e-10 Score=102.19 Aligned_cols=129 Identities=12% Similarity=0.143 Sum_probs=103.0
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
......|+.|+....++|+|+.||.++|-.+.+......... .....+...-+++.||.+.|.-+.|+.+.+.|-|.
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~g---laa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtS 89 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSG---LAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTS 89 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccc---cccccccchhhhhccCcceEEEEEecccccccccc
Confidence 345789999999999999999999999999875321111100 11123344567889999999999999999999999
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
..+|.|.+|-+-.++....+......+.|.+++|+.+|..++....||.+.+
T Consensus 90 Dt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV 141 (1189)
T KOG2041|consen 90 DTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV 141 (1189)
T ss_pred CCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence 9999999999998887666665667778999999999999999988888765
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-09 Score=89.95 Aligned_cols=191 Identities=16% Similarity=0.274 Sum_probs=123.7
Q ss_pred EecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCc--------------------------CCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQ--------------------------NDQQ 167 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~--------------------------~~~~ 167 (344)
+..-..++..+.|||||+ +|.+..-|-.|.||.+.+............. ..-.
T Consensus 87 Ideg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~ 166 (447)
T KOG4497|consen 87 IDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCK 166 (447)
T ss_pred eccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhH
Confidence 345567899999999996 5566667889999999764322111000000 0001
Q ss_pred CCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE
Q psy15157 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 168 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i 247 (344)
.+..+..+.-.+-..+.+.|+|||+.|+ +||---. ..+.....+-.+..++|+|.++++++|+.|+.+
T Consensus 167 ~W~ll~~f~~dT~DltgieWsPdg~~la---------Vwd~~Le---ykv~aYe~~lG~k~v~wsP~~qflavGsyD~~l 234 (447)
T KOG4497|consen 167 AWILLKEFKLDTIDLTGIEWSPDGNWLA---------VWDNVLE---YKVYAYERGLGLKFVEWSPCNQFLAVGSYDQML 234 (447)
T ss_pred HHHHHHhcCCCcccccCceECCCCcEEE---------Eecchhh---heeeeeeeccceeEEEeccccceEEeeccchhh
Confidence 1112222333334456666666665443 5652211 111122234568889999999999999999988
Q ss_pred EEE-----------------------------------------------------------------------------
Q psy15157 248 RLY----------------------------------------------------------------------------- 250 (344)
Q Consensus 248 ~~~----------------------------------------------------------------------------- 250 (344)
++.
T Consensus 235 rvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~ 314 (447)
T KOG4497|consen 235 RVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDF 314 (447)
T ss_pred hhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCC
Confidence 873
Q ss_pred ------------cCCCCEEEEEeCC--CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 ------------SSDGRIYCSGSKD--GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ------------~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
++|..++++-... ..+-+||++..+....+...| +|.+..|+|....|+.+.....+++|...
T Consensus 315 pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~---piraf~WdP~~prL~vctg~srLY~W~ps 391 (447)
T KOG4497|consen 315 PNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKH---PIRAFEWDPGRPRLVVCTGKSRLYFWAPS 391 (447)
T ss_pred CCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhcc---ceeEEEeCCCCceEEEEcCCceEEEEcCC
Confidence 6677777765433 568999999887766665433 69999999999889888888889999886
Q ss_pred CCee
Q psy15157 317 SARC 320 (344)
Q Consensus 317 ~~~~ 320 (344)
...+
T Consensus 392 g~~~ 395 (447)
T KOG4497|consen 392 GPRV 395 (447)
T ss_pred CceE
Confidence 5443
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.30 E-value=2e-09 Score=97.36 Aligned_cols=187 Identities=20% Similarity=0.218 Sum_probs=122.6
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..+..+...+...+|+|||++++.++.+ ..|++||+.++ . ...+..+.+.+.+++|+|
T Consensus 183 ~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g------------------~-~~~~~~~~~~~~~~~~sp 243 (417)
T TIGR02800 183 QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATG------------------Q-REKVASFPGMNGAPAFSP 243 (417)
T ss_pred EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCC------------------C-EEEeecCCCCccceEECC
Confidence 3455677789999999999999887654 47999998642 1 122233445567789999
Q ss_pred CCCEEE-EEeCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-C--EEEE--------------
Q psy15157 190 SAPILA-SGSKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-F--VLRL-------------- 249 (344)
Q Consensus 190 ~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~--~i~~-------------- 249 (344)
+++.|+ +.+.++ .|++||+.++...... .+........|+|+|++|+..+.. + .+.+
T Consensus 244 Dg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~---~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~ 320 (417)
T TIGR02800 244 DGSKLAVSLSKDGNPDIYVMDLDGKQLTRLT---NGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFR 320 (417)
T ss_pred CCCEEEEEECCCCCccEEEEECCCCCEEECC---CCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC
Confidence 998665 555444 5888998876432221 222334457899999988766532 2 2322
Q ss_pred --------EcCCCCEEEEEeCCC---cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC---cEEEEEc
Q psy15157 250 --------YSSDGRIYCSGSKDG---DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS---LVKLWEL 315 (344)
Q Consensus 250 --------~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg---~i~vwd~ 315 (344)
|+|+|++++.++.++ .|.+||+.++.... +.... ......|+|||++|+..+.++ .+++.+.
T Consensus 321 ~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~---~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 321 GGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERV-LTDTG---LDESPSFAPNGRMILYATTRGGRGVLGLVST 396 (417)
T ss_pred CCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEE-ccCCC---CCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence 378999998888776 79999988765432 22111 234568999999988876554 3555554
Q ss_pred CCCeeEEEeec
Q psy15157 316 SSARCLIAYTG 326 (344)
Q Consensus 316 ~~~~~~~~~~~ 326 (344)
+|+....+..
T Consensus 397 -~g~~~~~~~~ 406 (417)
T TIGR02800 397 -DGRFRARLPL 406 (417)
T ss_pred -CCceeeECCC
Confidence 4555555544
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.6e-10 Score=90.19 Aligned_cols=196 Identities=13% Similarity=0.206 Sum_probs=126.0
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC-------------------------------CcCCCCCCc
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE-------------------------------PQNDQQGHP 170 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~-------------------------------~~~~~~~~~ 170 (344)
...++|+.|...+++|..+| .+||+++............ ..++.....
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~ 86 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKER 86 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCc
Confidence 34489999999999987776 8999987532211111000 011112222
Q ss_pred eEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK-SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 171 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
++.++ ....+|.++.+.++ .++..- .+.|+||...+ .+....+.....+..+.+++-+.+..+|+.
T Consensus 87 ~i~el-~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~Laf--------- 153 (346)
T KOG2111|consen 87 CIIEL-SFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAF--------- 153 (346)
T ss_pred EEEEE-EeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEc---------
Confidence 22222 23456777777655 344433 57899998873 333444443333334443333322222222
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCCCEEEEEeCCCc-EEEEEcCCCeeEEEeec
Q psy15157 250 YSSDGRIYCSGSKDGDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL-VKLWELSSARCLIAYTG 326 (344)
Q Consensus 250 ~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~-i~vwd~~~~~~~~~~~~ 326 (344)
-|-.-|.|+|-|+...+. ...+. +|. +.|.+++.+.+|..+||+|..|+ |||||..+|+.+..++.
T Consensus 154 ---------Pg~k~GqvQi~dL~~~~~~~p~~I~-AH~-s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RR 222 (346)
T KOG2111|consen 154 ---------PGFKTGQVQIVDLASTKPNAPSIIN-AHD-SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRR 222 (346)
T ss_pred ---------CCCccceEEEEEhhhcCcCCceEEE-ccc-CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeec
Confidence 345568999999887665 23443 665 57999999999999999999998 89999999999999998
Q ss_pred CCCcCceeeeeeeccC
Q psy15157 327 AGSMGQQFELTLTVDA 342 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (344)
........++.|+++.
T Consensus 223 G~d~A~iy~iaFSp~~ 238 (346)
T KOG2111|consen 223 GVDRADIYCIAFSPNS 238 (346)
T ss_pred CCchheEEEEEeCCCc
Confidence 8888888888888875
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.1e-09 Score=96.76 Aligned_cols=190 Identities=17% Similarity=0.115 Sum_probs=114.4
Q ss_pred EecCCCceEEEEECCCCCE---EEEEeCCCe--EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 115 VTSHKSPCRAGAFSIDGQL---CATGSVDAS--IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~---l~sg~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
++.....+..-+|||||+. +++...+|. |.+.++.++ ....+.. ..+.....+|+|
T Consensus 180 lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g----------------~~~~lt~---~~g~~~~p~wSP 240 (428)
T PRK01029 180 LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENP----------------AGKKILA---LQGNQLMPTFSP 240 (428)
T ss_pred cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCC----------------CceEeec---CCCCccceEECC
Confidence 4445566777899999974 234444544 566666432 1122222 333445679999
Q ss_pred CCCEEEEEeC-----CCcEEEEEcCCCccccceeeec-cccceEEEEEecCCCEEEEEe-CCCEEEE-------------
Q psy15157 190 SAPILASGSK-----DKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFHPCGDYMVVGT-DHFVLRL------------- 249 (344)
Q Consensus 190 ~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~~i~~------------- 249 (344)
||+.|+..+. |..+.+|++..+.......... ........+|+|+|+.|+..+ .++...+
T Consensus 241 DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~ 320 (428)
T PRK01029 241 RKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPR 320 (428)
T ss_pred CCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceE
Confidence 9987765442 2234457766532111111111 122345679999999887654 2332222
Q ss_pred -------------EcCCCCEEEEEeCC---CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC---CCcE
Q psy15157 250 -------------YSSDGRIYCSGSKD---GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK---DSLV 310 (344)
Q Consensus 250 -------------~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~---dg~i 310 (344)
|+|+|+.++..+.+ ..|.+||+.+++...... .. ..+....|+|||++|+..+. ...|
T Consensus 321 ~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~-~~--~~~~~p~wSpDG~~L~f~~~~~g~~~L 397 (428)
T PRK01029 321 LLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT-SP--ENKESPSWAIDSLHLVYSAGNSNESEL 397 (428)
T ss_pred EeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC-CC--CCccceEECCCCCEEEEEECCCCCceE
Confidence 48999988766543 369999999887654332 21 24677899999998875432 3569
Q ss_pred EEEEcCCCeeEEEeec
Q psy15157 311 KLWELSSARCLIAYTG 326 (344)
Q Consensus 311 ~vwd~~~~~~~~~~~~ 326 (344)
++||+.+++......+
T Consensus 398 ~~vdl~~g~~~~Lt~~ 413 (428)
T PRK01029 398 YLISLITKKTRKIVIG 413 (428)
T ss_pred EEEECCCCCEEEeecC
Confidence 9999988876554443
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-09 Score=98.30 Aligned_cols=162 Identities=15% Similarity=0.096 Sum_probs=106.2
Q ss_pred EEEecCCcCCeEEEEEcCCCCEEEEEeC---CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEE-EeCCCEE
Q psy15157 172 IRTLYDHIEEVTCLEFHPSAPILASGSK---DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV-GTDHFVL 247 (344)
Q Consensus 172 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i 247 (344)
.+.+..|...+.+.+|+|||+.|+..+. +..|.+||+.+++... + ......+...+|+|+|+.|+. .+.++..
T Consensus 194 ~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-l--~~~~g~~~~~~~SPDG~~la~~~~~~g~~ 270 (435)
T PRK05137 194 VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL-V--GNFPGMTFAPRFSPDGRKVVMSLSQGGNT 270 (435)
T ss_pred cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE-e--ecCCCcccCcEECCCCCEEEEEEecCCCc
Confidence 3455677888999999999998877653 4689999998875422 1 223445677899999998764 4444443
Q ss_pred EE------------------------EcCCCCEEEEEeC-CC--cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 248 RL------------------------YSSDGRIYCSGSK-DG--DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 248 ~~------------------------~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
.+ |+|+|+.++..+. +| .|++||+..++... +... . ..+....|+|||++
T Consensus 271 ~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~~-~-~~~~~~~~SpdG~~ 347 (435)
T PRK05137 271 DIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISFG-G-GRYSTPVWSPRGDL 347 (435)
T ss_pred eEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eecC-C-CcccCeEECCCCCE
Confidence 33 3889998877664 33 68888987665433 3212 2 24667889999999
Q ss_pred EEEEeCC---CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 301 LLSSGKD---SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 301 l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|+..+.+ ..|.+||+.++. ...+.... ......|++|+.
T Consensus 348 ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~~---~~~~p~~spDG~ 389 (435)
T PRK05137 348 IAFTKQGGGQFSIGVMKPDGSG-ERILTSGF---LVEGPTWAPNGR 389 (435)
T ss_pred EEEEEcCCCceEEEEEECCCCc-eEeccCCC---CCCCCeECCCCC
Confidence 9876543 368889986554 33343211 234455666553
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.7e-10 Score=105.07 Aligned_cols=116 Identities=18% Similarity=0.179 Sum_probs=97.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+.||.+.|..+.++.||+++++.|.|.++++|++++.. ....+..+|...|+.+.|+|+ .
T Consensus 170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~-----------------~~~~~~fgHsaRvw~~~~~~n--~ 230 (967)
T KOG0974|consen 170 RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSRE-----------------VLGCTGFGHSARVWACCFLPN--R 230 (967)
T ss_pred eecccCCceEEEEEccCCcEEEEEecCcceeeeeccccc-----------------ccCcccccccceeEEEEeccc--e
Confidence 578999999999999999999999999999999997531 112466799999999999999 8
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
++|++.|.+.++|+.+..... .+. ......++.++..+....+++++.|+.+++|
T Consensus 231 i~t~gedctcrvW~~~~~~l~-~y~-~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~ 285 (967)
T KOG0974|consen 231 IITVGEDCTCRVWGVNGTQLE-VYD-EHSGKGIWKIAVPIGVIIKVTGGNDSTLKLW 285 (967)
T ss_pred eEEeccceEEEEEecccceeh-hhh-hhhhcceeEEEEcCCceEEEeeccCcchhhh
Confidence 999999999999987654432 222 2234568999999999999999999999987
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.2e-11 Score=103.59 Aligned_cols=180 Identities=18% Similarity=0.250 Sum_probs=133.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|..+.|-|..-+|++++..|.++--|+.+ ++.+..+..-.+.+..++-+|-...+-+|..
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~------------------GklVa~~~t~~G~~~vm~qNP~NaVih~Ghs 271 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASEAGFLKYQDVST------------------GKLVASIRTGAGRTDVMKQNPYNAVIHLGHS 271 (545)
T ss_pred CchhhhcccchhheeeecccCCceEEEeech------------------hhhhHHHHccCCccchhhcCCccceEEEcCC
Confidence 4577778888888999999999999999965 4445556666778888999998889999999
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEee
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVAT 279 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 279 (344)
+|+|.+|........ .+...|.++|.+++++++|.|++ |.+.|..++|||++.-..+.+
T Consensus 272 nGtVSlWSP~skePL--vKiLcH~g~V~siAv~~~G~YMa-------------------TtG~Dr~~kIWDlR~~~ql~t 330 (545)
T KOG1272|consen 272 NGTVSLWSPNSKEPL--VKILCHRGPVSSIAVDRGGRYMA-------------------TTGLDRKVKIWDLRNFYQLHT 330 (545)
T ss_pred CceEEecCCCCcchH--HHHHhcCCCcceEEECCCCcEEe-------------------ecccccceeEeeeccccccce
Confidence 999999998876543 44567899999999999655555 889999999999999887777
Q ss_pred ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC-C--CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 280 FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-S--ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 280 ~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+...+ +...+++|..| +++.|....|.||.=. . +..-.-|-.|.-.+....+-|++-.|
T Consensus 331 ~~tp~---~a~~ls~Sqkg--lLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~ED 392 (545)
T KOG1272|consen 331 YRTPH---PASNLSLSQKG--LLALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYED 392 (545)
T ss_pred eecCC---Ccccccccccc--ceeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHH
Confidence 76533 46788888554 5556666789999532 2 23333444555555555555555443
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=3e-10 Score=93.40 Aligned_cols=202 Identities=20% Similarity=0.285 Sum_probs=140.3
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCC--C---------------CC------CcCCCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSME--S---------------SE------PQNDQQGH 169 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~--~---------------~~------~~~~~~~~ 169 (344)
.....|...|..+-|+....++++.+.|..+.---.+.+....... . .. ........
T Consensus 108 r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~ 187 (404)
T KOG1409|consen 108 KDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGC 187 (404)
T ss_pred hhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCC
Confidence 3456899999999999989999999998766433332221111000 0 00 00123445
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
.++.++.+|.+.+.+++|.+....|.+|..|..+.+||+...+. ..+...+|...|..+...+.-+.+++++.|+.|.+
T Consensus 188 ~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g-~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~ 266 (404)
T KOG1409|consen 188 QLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKG-TAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVV 266 (404)
T ss_pred ceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcc-eeeeeccchhhhhhhhhhhhheeeeeccCCCeEEE
Confidence 67788999999999999999999999999999999999976543 33455678888888888888899999999999999
Q ss_pred E--------------------------------------------------------cCCCCEEEEEeCCCcEEEEeCCC
Q psy15157 250 Y--------------------------------------------------------SSDGRIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 250 ~--------------------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~ 273 (344)
| +.+.....+-+..-.+|+-|...
T Consensus 267 w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p~mg~e~~vR~~~~c~ 346 (404)
T KOG1409|consen 267 WNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTMGFEFSVRVCDSCY 346 (404)
T ss_pred EeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccccccccceeEEEEecccc
Confidence 9 11111112222233455554221
Q ss_pred -------CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 274 -------SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 274 -------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..++......++ .|+++.+..+-..|+|+|.|..|+|||+++
T Consensus 347 ~~i~~~~~t~LA~phei~t--gItamhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 347 PTIKDEERTPLAIPHEIKT--GITAMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred hhhhcCCCCcccccccccc--ceeEEEhhhhccceeecCCceEEEEEechh
Confidence 112333333343 499999988888999999999999999965
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2e-10 Score=98.31 Aligned_cols=249 Identities=15% Similarity=0.167 Sum_probs=167.0
Q ss_pred HHHHHhHHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccccCCCCCCccchh-cccC
Q psy15157 11 AEVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRMEPSIGLNPIQE-ILIG 89 (344)
Q Consensus 11 ~~~~~~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 89 (344)
..+++++..+..++-+++..||.+-+.++-.. ..--.|.....+-+..+|..... +............+ ..+.
T Consensus 257 GkDlrrHTnFtdYY~R~~nsDGkrIvFq~~Gd----IylydP~td~lekldI~lpl~rk--~k~~k~~~pskyledfa~~ 330 (668)
T COG4946 257 GKDLRRHTNFTDYYPRNANSDGKRIVFQNAGD----IYLYDPETDSLEKLDIGLPLDRK--KKQPKFVNPSKYLEDFAVV 330 (668)
T ss_pred CchhhhcCCchhccccccCCCCcEEEEecCCc----EEEeCCCcCcceeeecCCccccc--cccccccCHHHhhhhhccC
Confidence 45789999999999999999997655444322 22223333334445555555422 11111111111222 3455
Q ss_pred CCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCC-eEEEEEcCCccccccCCCCCCcCCCCC
Q psy15157 90 PGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDA-SIKILDVDRMLAKSSMESSEPQNDQQG 168 (344)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (344)
+|.-+.+.+.+......+....+. -.+|.+.|+-..+..+++-++.|..|| .+-|+|.+++
T Consensus 331 ~Gd~ia~VSRGkaFi~~~~~~~~i-qv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~----------------- 392 (668)
T COG4946 331 NGDYIALVSRGKAFIMRPWDGYSI-QVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGG----------------- 392 (668)
T ss_pred CCcEEEEEecCcEEEECCCCCeeE-EcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCc-----------------
Confidence 565555555554333322222222 247889999999999999999999999 8999998743
Q ss_pred CceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEE
Q psy15157 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248 (344)
Q Consensus 169 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~ 248 (344)
.+..+...-+.|.++..+++|+.++.+.....|.+.|+.+++....- ....+.|+.+.|||++++++.+-.+|
T Consensus 393 --e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~id--kS~~~lItdf~~~~nsr~iAYafP~g--- 465 (668)
T COG4946 393 --EVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLID--KSEYGLITDFDWHPNSRWIAYAFPEG--- 465 (668)
T ss_pred --eEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEec--ccccceeEEEEEcCCceeEEEecCcc---
Confidence 34455667788999999999999999999999999999998754322 23567799999999999999876432
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 249 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
-.-..|+++|+..++......... .=.+-+|+||+++|.--+
T Consensus 466 ------------y~tq~Iklydm~~~Kiy~vTT~ta---~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 466 ------------YYTQSIKLYDMDGGKIYDVTTPTA---YDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred ------------eeeeeEEEEecCCCeEEEecCCcc---cccCcccCCCCcEEEEEe
Confidence 223579999999888765443211 234668999999876544
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.4e-10 Score=94.28 Aligned_cols=168 Identities=14% Similarity=0.234 Sum_probs=111.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe--cCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL--YDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.+..+..++.++++|.+..+....++++.... .+.+..... ......++.+.........-..+
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~--------------~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkag 129 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENP--------------KGAKLLDVSCVPKRPTAISFIREDTSVLVADKAG 129 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCC--------------CcceeeeEeecccCcceeeeeeccceEEEEeecC
Confidence 34445667888999999888888888875311 011222222 12222333333332222333344
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
....+.+|....+. .....+|-..++.++|+||+++|+ ++..|..|++-.......+.
T Consensus 130 D~~~~di~s~~~~~---~~~~lGhvSml~dVavS~D~~~Ii-------------------taDRDEkIRvs~ypa~f~Ie 187 (390)
T KOG3914|consen 130 DVYSFDILSADSGR---CEPILGHVSMLLDVAVSPDDQFII-------------------TADRDEKIRVSRYPATFVIE 187 (390)
T ss_pred CceeeeeecccccC---cchhhhhhhhhheeeecCCCCEEE-------------------EecCCceEEEEecCcccchh
Confidence 45556666655433 344567889999999999766555 77888888888777766666
Q ss_pred eecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 279 TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 279 ~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+-.+|.. -|..++.-++ ..|++||.|++|++||+++|+++.++.-
T Consensus 188 sfclGH~e-FVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 188 SFCLGHKE-FVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTCDL 233 (390)
T ss_pred hhccccHh-heeeeeeccC-ceeeecCCCCcEEEEecccCCcccccch
Confidence 77666764 6999998854 5589999999999999999999987754
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.4e-09 Score=93.53 Aligned_cols=160 Identities=11% Similarity=0.124 Sum_probs=101.9
Q ss_pred EecCCcCCeEEEEEcCCCCEEEEEeC---CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCC--EE
Q psy15157 174 TLYDHIEEVTCLEFHPSAPILASGSK---DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHF--VL 247 (344)
Q Consensus 174 ~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~--~i 247 (344)
.+..+...+.+.+|+|||+.|+..+. +..|.+||+.+++...... .........|+|+|+.|+.. +.++ .+
T Consensus 193 ~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~---~~~~~~~~~~SPDG~~La~~~~~~g~~~I 269 (429)
T PRK03629 193 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS---FPRHNGAPAFSPDGSKLAFALSKTGSLNL 269 (429)
T ss_pred EeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccC---CCCCcCCeEECCCCCEEEEEEcCCCCcEE
Confidence 34456678999999999998775542 4579999998875432222 12234568999999988865 3344 34
Q ss_pred EE----------------------EcCCCCEEEEEeCC-Cc--EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEE
Q psy15157 248 RL----------------------YSSDGRIYCSGSKD-GD--IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLL 302 (344)
Q Consensus 248 ~~----------------------~~~~~~~l~~~~~d-g~--i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 302 (344)
.+ |+|+|+.++..+.+ +. |.++|+.+++.. .+... +.......|+|||++|+
T Consensus 270 ~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~--~~~~~~~~~SpDG~~Ia 346 (429)
T PRK03629 270 YVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWE--GSQNQDADVSSDGKFMV 346 (429)
T ss_pred EEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecC--CCCccCEEECCCCCEEE
Confidence 44 38899988766654 44 555577766543 23211 12356789999999988
Q ss_pred EEeCC---CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 303 SSGKD---SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 303 s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..+.+ ..|++||+.+++.. .+.... ......+++|+.
T Consensus 347 ~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~---~~~~p~~SpDG~ 386 (429)
T PRK03629 347 MVSSNGGQQHIAKQDLATGGVQ-VLTDTF---LDETPSIAPNGT 386 (429)
T ss_pred EEEccCCCceEEEEECCCCCeE-EeCCCC---CCCCceECCCCC
Confidence 76543 35889999888643 343221 223456666654
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.6e-09 Score=96.75 Aligned_cols=161 Identities=14% Similarity=0.135 Sum_probs=104.0
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCC--E
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKD---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHF--V 246 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~--~ 246 (344)
+.+..+...+.+.+|+|+++.|+.++.+ ..|++||+.+++..... .......+..|+|+|+.++.. +.++ .
T Consensus 197 ~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~---~~~g~~~~~~~SpDG~~l~~~~s~~g~~~ 273 (433)
T PRK04922 197 QTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVA---SFRGINGAPSFSPDGRRLALTLSRDGNPE 273 (433)
T ss_pred eEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEec---cCCCCccCceECCCCCEEEEEEeCCCCce
Confidence 3455667789999999999988877643 46999999877543221 122334578999999988643 4444 3
Q ss_pred EEE----------------------EcCCCCEEEEEeC-CCc--EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 247 LRL----------------------YSSDGRIYCSGSK-DGD--IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 247 i~~----------------------~~~~~~~l~~~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+.+ |+|+|+.++..+. +|. |+++|+.+++...... . +.....++|+|||++|
T Consensus 274 Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~-~--g~~~~~~~~SpDG~~I 350 (433)
T PRK04922 274 IYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTF-Q--GNYNARASVSPDGKKI 350 (433)
T ss_pred EEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeec-C--CCCccCEEECCCCCEE
Confidence 444 3789998877664 444 7777777765433222 1 1234568999999999
Q ss_pred EEEeCCC---cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 302 LSSGKDS---LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 302 ~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..+.++ .|.+||+.+++.. .+.... ......+++|+.
T Consensus 351 a~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~---~~~~p~~spdG~ 391 (433)
T PRK04922 351 AMVHGSGGQYRIAVMDLSTGSVR-TLTPGS---LDESPSFAPNGS 391 (433)
T ss_pred EEEECCCCceeEEEEECCCCCeE-ECCCCC---CCCCceECCCCC
Confidence 8765433 5999999888754 333221 123345666653
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-07 Score=82.54 Aligned_cols=189 Identities=17% Similarity=0.277 Sum_probs=122.0
Q ss_pred CCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe----------cCCcCCeEEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL----------YDHIEEVTCLEF 187 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~h~~~v~~~~~ 187 (344)
......+++++++++|+++.. +|+|.++++....... .....+ +.......++.|
T Consensus 86 g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~--------------~~~~~~~~~g~g~~~~rq~~~h~H~v~~ 151 (345)
T PF10282_consen 86 GSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLG--------------EVVQTVRHEGSGPNPDRQEGPHPHQVVF 151 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEE--------------EEEEEEESEEEESSTTTTSSTCEEEEEE
T ss_pred CCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccc--------------eeeeecccCCCCCcccccccccceeEEE
Confidence 345567999999999998875 8999999997421100 011111 112345778999
Q ss_pred cCCCCEEEEEeC-CCcEEEEEcCCCc--ccccee-eeccccceEEEEEecCCCEEEEEe-CCCEEEEE------------
Q psy15157 188 HPSAPILASGSK-DKTVKMFDYSKSS--VRKAHK-TIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY------------ 250 (344)
Q Consensus 188 ~~~~~~l~s~~~-dg~i~iwd~~~~~--~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~------------ 250 (344)
+|+++++++... ...|.+|++.... +..... ........+.+.|+|+++++++.. .++.|.++
T Consensus 152 ~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~ 231 (345)
T PF10282_consen 152 SPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEI 231 (345)
T ss_dssp -TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEE
Confidence 999997776543 4679999997764 222111 123456688999999999987764 34445544
Q ss_pred ---------------------cCCCCEEEEEe-CCCcEEEEeCC--CCe--EEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 251 ---------------------SSDGRIYCSGS-KDGDIKIWDGV--SSK--CVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 ---------------------~~~~~~l~~~~-~dg~i~iwd~~--~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+|+|++|+++. ....|.+|++. +++ .+..+.. .+.....+.++|+|++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~--~G~~Pr~~~~s~~g~~l~Va 309 (345)
T PF10282_consen 232 QTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPT--GGKFPRHFAFSPDGRYLYVA 309 (345)
T ss_dssp EEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEE--SSSSEEEEEE-TTSSEEEEE
T ss_pred EEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeC--CCCCccEEEEeCCCCEEEEE
Confidence 78999877765 45679999983 333 3333332 23347999999999999988
Q ss_pred e-CCCcEEEEEc--CCCeeEEE
Q psy15157 305 G-KDSLVKLWEL--SSARCLIA 323 (344)
Q Consensus 305 ~-~dg~i~vwd~--~~~~~~~~ 323 (344)
+ .++.|.+|++ .+|.+...
T Consensus 310 ~~~s~~v~vf~~d~~tG~l~~~ 331 (345)
T PF10282_consen 310 NQDSNTVSVFDIDPDTGKLTPV 331 (345)
T ss_dssp ETTTTEEEEEEEETTTTEEEEE
T ss_pred ecCCCeEEEEEEeCCCCcEEEe
Confidence 6 5678999876 46665443
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.4e-08 Score=91.91 Aligned_cols=142 Identities=16% Similarity=0.215 Sum_probs=98.0
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCC--E
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKD---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHF--V 246 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~--~ 246 (344)
+.+..+...+...+|+|+++.|+.++.+ ..|++||+.+++.... ......+.+++|+|+|+.|+.. +.++ .
T Consensus 183 ~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~---~~~~~~~~~~~~spDg~~l~~~~~~~~~~~ 259 (417)
T TIGR02800 183 QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV---ASFPGMNGAPAFSPDGSKLAVSLSKDGNPD 259 (417)
T ss_pred EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe---ecCCCCccceEECCCCCEEEEEECCCCCcc
Confidence 3444566678899999999988876654 4799999988754322 2233445678999999987754 3333 2
Q ss_pred EEE----------------------EcCCCCEEEEEeCC-C--cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 247 LRL----------------------YSSDGRIYCSGSKD-G--DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 247 i~~----------------------~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+.+ |+++|+.++..+.. + .|+++|+.+++... +... +..+..+.|+|+|++|
T Consensus 260 i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~-l~~~--~~~~~~~~~spdg~~i 336 (417)
T TIGR02800 260 IYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR-LTFR--GGYNASPSWSPDGDLI 336 (417)
T ss_pred EEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecC--CCCccCeEECCCCCEE
Confidence 333 36788887765543 3 58888888776433 3212 2346778999999999
Q ss_pred EEEeCCC---cEEEEEcCCCee
Q psy15157 302 LSSGKDS---LVKLWELSSARC 320 (344)
Q Consensus 302 ~s~~~dg---~i~vwd~~~~~~ 320 (344)
+.++.++ .|.+||+.++..
T Consensus 337 ~~~~~~~~~~~i~~~d~~~~~~ 358 (417)
T TIGR02800 337 AFVHREGGGFNIAVMDLDGGGE 358 (417)
T ss_pred EEEEccCCceEEEEEeCCCCCe
Confidence 9888776 799999988654
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-09 Score=88.14 Aligned_cols=159 Identities=16% Similarity=0.096 Sum_probs=110.6
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CEEEEEeCC
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PILASGSKD 200 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d 200 (344)
..++.|++.+..++++..+|.+.+-+... ...+.++..+.|.-+++...|+... +++.+|+.|
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~----------------~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD 187 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETE----------------MVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDD 187 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecce----------------eeeeecccccccceeeeeeecccCCCceEEecCCC
Confidence 45677888888899998999988544432 1123345788999999999998744 589999999
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CeEEee
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS-SKCVAT 279 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~ 279 (344)
+.+..||++.++...-.....|...|.++.-+| |.+.++++|+.|-.|++||.++ ++++..
T Consensus 188 ~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~------------------~~~~~I~TGsYDe~i~~~DtRnm~kPl~~ 249 (339)
T KOG0280|consen 188 GSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSP------------------PKPTYIATGSYDECIRVLDTRNMGKPLFK 249 (339)
T ss_pred ceEEEEEecCCcceeeecceeeecceEEEecCC------------------CCCceEEEeccccceeeeehhcccCcccc
Confidence 999999999443211111234677788888877 5777888999999999999994 555543
Q ss_pred ecccCCCccEEEEEEccCCC-EEEEEeCCCcEEEEEcCC
Q psy15157 280 FSKAHDGAEISSLTFTRNGK-YLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 280 ~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~vwd~~~ 317 (344)
-. .++.|..+.++|.-. .|+.++.-.-.+|-+...
T Consensus 250 ~~---v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~ 285 (339)
T KOG0280|consen 250 AK---VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSD 285 (339)
T ss_pred Cc---cccceEEEEecchhhhHHHHHHHhcCceEEEecc
Confidence 32 234699999998432 233333333345555544
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.9e-10 Score=112.35 Aligned_cols=182 Identities=15% Similarity=0.202 Sum_probs=126.4
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+..|-..|.++.-+|...+.+||+.||.|++|....+. .-......+. ..|+.+.|+.+|+.+
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~----------------~v~~~rt~g~-s~vtr~~f~~qGnk~ 2266 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQ----------------QVVCFRTAGN-SRVTRSRFNHQGNKF 2266 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCC----------------eEEEeeccCc-chhhhhhhcccCCce
Confidence 44566788999999999999999999999999985321 1111122233 789999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec----------CC--------------CEEEEEeCC-CEEEE
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP----------CG--------------DYMVVGTDH-FVLRL 249 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~--------------~~l~~~~~~-~~i~~ 249 (344)
..+..||.+.+|.+... .......|......+.|-. ++ .++-+|-.. -++..
T Consensus 2267 ~i~d~dg~l~l~q~~pk---~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~ 2343 (2439)
T KOG1064|consen 2267 GIVDGDGDLSLWQASPK---PYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLA 2343 (2439)
T ss_pred eeeccCCceeecccCCc---ceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEE
Confidence 99999999999998732 1122223444444444422 11 111112111 13334
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 250 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
|-|....|++|+.+|.|++||++..+..+.+.. ++ ...++++|+..|.|+||++..-..+++|++..
T Consensus 2344 ~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ 2410 (2439)
T KOG1064|consen 2344 YAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-----------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEH 2410 (2439)
T ss_pred EcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-----------hh-hhheeeccCcccceEEEEccccchhhcCchhh
Confidence 578888889999999999999988877666642 44 56788999999999999998888888887654
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.3e-09 Score=86.43 Aligned_cols=195 Identities=17% Similarity=0.226 Sum_probs=125.1
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC---------------------CcCC------CCC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE---------------------PQND------QQG 168 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~---------------------~~~~------~~~ 168 (344)
.-|+++-.+-+.+-.+..++++..||.+.+++.+............ -..+ ...
T Consensus 86 a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~ 165 (319)
T KOG4714|consen 86 AKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANT 165 (319)
T ss_pred eccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeec
Confidence 3455554444555567789999999999999986521100000000 0000 011
Q ss_pred CceEEEec---CCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeC
Q psy15157 169 HPVIRTLY---DHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTD 243 (344)
Q Consensus 169 ~~~~~~~~---~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 243 (344)
..+..++. .-...|.+++-+|..+ ++++|+.||.+.+||++....... ....|..+++.+.|+| ++..|+++++
T Consensus 166 ~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S-~l~ahk~~i~eV~FHpk~p~~Lft~se 244 (319)
T KOG4714|consen 166 LDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVS-LLKAHKAEIWEVHFHPKNPEHLFTCSE 244 (319)
T ss_pred ccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHH-HHHHhhhhhhheeccCCCchheeEecC
Confidence 11122221 1223488999999654 778889999999999998743322 2345788999999999 6789999999
Q ss_pred CCEEEEEcCCCCEEEEEeCCCcEEEEe---CCCC-eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 244 HFVLRLYSSDGRIYCSGSKDGDIKIWD---GVSS-KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 244 ~~~i~~~~~~~~~l~~~~~dg~i~iwd---~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
||.+..|+.++..|.++.....+..|= .... -.+..+.... ...|+++.. -|..|++|++-+-|++++
T Consensus 245 dGslw~wdas~~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~-~~SinsfDV--~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 245 DGSLWHWDASTTFLSISNQASVISSWLSGDPVKSRIEITSLLPSR-SLSINSFDV--LGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred CCcEEEEcCCCceEEecCccccccccccCCcccceEeeecccccc-ceeeeeeec--cCceEEeccccceEEEec
Confidence 999999999999998777777777883 1111 1122222111 124666555 588999999999998875
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.5e-09 Score=84.89 Aligned_cols=175 Identities=13% Similarity=0.151 Sum_probs=118.4
Q ss_pred CceEEEEECC---CCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 120 SPCRAGAFSI---DGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 120 ~~v~~~~~s~---~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
..+..+.|+. +|. .++-+..+|.|.++............ .+...+-......++.|++.+..++
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~------------~ls~~ki~~~~~lslD~~~~~~~i~ 137 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLR------------GLSSKKISVVEALSLDISTSGTKIF 137 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeec------------ccchhhhhheeeeEEEeeccCceEE
Confidence 4566777753 555 66777888999999765321111000 0000011111356888999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC-CC
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV-SS 274 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~-~~ 274 (344)
++-.+|.+.+-+..............|...++...|+.. +.+++++|+.|+.+..||++ .+
T Consensus 138 vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~------------------~pnlvytGgDD~~l~~~D~R~p~ 199 (339)
T KOG0280|consen 138 VSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDK------------------EPNLVYTGGDDGSLSCWDIRIPK 199 (339)
T ss_pred EEcCCCcEEEEecceeeeeecccccccceeeeeeecccC------------------CCceEEecCCCceEEEEEecCCc
Confidence 999999999777665554444444557777888888763 34566799999999999999 44
Q ss_pred eEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcC-CCeeEEEee
Q psy15157 275 KCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELS-SARCLIAYT 325 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~ 325 (344)
+.+..-...|. ..|.+|.-+| .+.+|++|+.|-.|++||+| -++++..-+
T Consensus 200 ~~i~~n~kvH~-~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~ 251 (339)
T KOG0280|consen 200 TFIWHNSKVHT-SGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK 251 (339)
T ss_pred ceeeecceeee-cceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc
Confidence 55544333444 4588998876 67899999999999999999 467665433
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.5e-08 Score=85.11 Aligned_cols=170 Identities=18% Similarity=0.247 Sum_probs=112.6
Q ss_pred CEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy15157 132 QLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210 (344)
Q Consensus 132 ~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 210 (344)
+++ ++-..+++|.|.|..+ .+.+..+......-..+.++||++++++++.||.|.++|+.+
T Consensus 6 ~l~~V~~~~~~~v~viD~~t------------------~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~ 67 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGAT------------------NKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLAT 67 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-------------------SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTS
T ss_pred cEEEEEecCCCEEEEEECCC------------------CeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCc
Confidence 444 4555689999999854 455666665444445678999999999999999999999999
Q ss_pred CccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE------------------------------cCCCCEEEE
Q psy15157 211 SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY------------------------------SSDGRIYCS 259 (344)
Q Consensus 211 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~------------------------------~~~~~~l~~ 259 (344)
.+....+. .......++++++|++++++. ..+.+.++ ++....++.
T Consensus 68 ~~~v~~i~---~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv 144 (369)
T PF02239_consen 68 GKVVATIK---VGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVV 144 (369)
T ss_dssp SSEEEEEE----SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEE
T ss_pred ccEEEEEe---cCCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEE
Confidence 87655554 344568899999999999875 56777776 233332333
Q ss_pred EeC-CCcEEEEeCCCCeEEe--eecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCeeEEEee
Q psy15157 260 GSK-DGDIKIWDGVSSKCVA--TFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 260 ~~~-dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.-. .+.|.+.|....+.+. .+. .+.......|+|+++|++++ ..+..|-++|..+++.+..+.
T Consensus 145 ~lkd~~~I~vVdy~d~~~~~~~~i~---~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~ 211 (369)
T PF02239_consen 145 NLKDTGEIWVVDYSDPKNLKVTTIK---VGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALID 211 (369)
T ss_dssp EETTTTEEEEEETTTSSCEEEEEEE-----TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEccCCeEEEEEeccccccceeeec---ccccccccccCcccceeeecccccceeEEEeeccceEEEEee
Confidence 333 3666666765543322 222 12357788999999997765 566789999999998877664
|
... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.5e-10 Score=91.58 Aligned_cols=136 Identities=17% Similarity=0.255 Sum_probs=101.3
Q ss_pred CcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcc--ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSV--RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
-.+.|.++.|...++++..|..+|.|...|++.... ........|...|+++..-. -++.
T Consensus 251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq------------------~s~q 312 (425)
T KOG2695|consen 251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQ------------------FSQQ 312 (425)
T ss_pred cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhc------------------cccc
Confidence 456788999999899999999999999999987521 12223345677777766543 2455
Q ss_pred EEEEEeCCCcEEEEeCCCCeE---EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKC---VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
+|++.+.+|.|++||.+.-++ +..+.++-+...-.-+-.++....++++|+|...|||.+++|+++.+++...+..
T Consensus 313 ~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~ 391 (425)
T KOG2695|consen 313 KLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSAS 391 (425)
T ss_pred eEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCccc
Confidence 666889999999999998777 7777644332222333456677789999999999999999999999988765443
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-07 Score=76.90 Aligned_cols=195 Identities=16% Similarity=0.114 Sum_probs=118.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC------CEE
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA------PIL 194 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~------~~l 194 (344)
.=+.++||||+.+||.+...|+|++||+........... ......-...|..+.|.+.. ..|
T Consensus 45 QWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~------------~~~~~d~~~Aiagl~Fl~~~~s~~ws~EL 112 (282)
T PF15492_consen 45 QWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPA------------MSFPGDLSDAIAGLIFLEYKKSAQWSYEL 112 (282)
T ss_pred hheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcc------------cccCCccccceeeeEeeccccccccceeE
Confidence 346789999999999999999999999963211110000 00001124567777775422 256
Q ss_pred EEEeCCCcEEEEEcCCCc---ccc--ceeeec-cccceEEEEEecCCCEEEEEeCCCE-----------EEEE-----cC
Q psy15157 195 ASGSKDKTVKMFDYSKSS---VRK--AHKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFV-----------LRLY-----SS 252 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~---~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~-----------i~~~-----~~ 252 (344)
+.-..+|.++-|-+..+. ... .+.... ....|.++.++|..+.|++|+.... +..| .|
T Consensus 113 lvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~P 192 (282)
T PF15492_consen 113 LVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSP 192 (282)
T ss_pred EEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCC
Confidence 667788888877764321 111 122211 3567999999999999988864321 2223 12
Q ss_pred CCCEEEEEeCCCc------EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 253 DGRIYCSGSKDGD------IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 253 ~~~~l~~~~~dg~------i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
....+ +...|+. -.+|.+-+.+... .. ......|..|..+|||+.|++...+|.|.+|++.+-++..+++-
T Consensus 193 yyk~v-~~~~~~~~~~~~~~~~~~~~~~~~fs-~~-~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~ 269 (282)
T PF15492_consen 193 YYKQV-TSSEDDITASSKRRGLLRIPSFKFFS-RQ-GQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQ 269 (282)
T ss_pred cEEEc-cccCccccccccccceeeccceeeee-cc-ccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccch
Confidence 22221 2222221 1233332222211 11 22234699999999999999999999999999999998888875
Q ss_pred CCCc
Q psy15157 327 AGSM 330 (344)
Q Consensus 327 ~~~~ 330 (344)
..-+
T Consensus 270 ~eqP 273 (282)
T PF15492_consen 270 DEQP 273 (282)
T ss_pred hhCC
Confidence 5433
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.8e-08 Score=86.21 Aligned_cols=122 Identities=21% Similarity=0.408 Sum_probs=92.2
Q ss_pred CcCCeEEEEEcCCCCEEEE--EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 178 HIEEVTCLEFHPSAPILAS--GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
..++|.++.|+|+++.|+. |-.=-.+.|+|++-. ..+. -..++-+++-|+|.|++++.++
T Consensus 269 k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~---~v~d--f~egpRN~~~fnp~g~ii~lAG------------- 330 (566)
T KOG2315|consen 269 KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK---PVFD--FPEGPRNTAFFNPHGNIILLAG------------- 330 (566)
T ss_pred CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC---EeEe--CCCCCccceEECCCCCEEEEee-------------
Confidence 4789999999999986654 344577999998653 2232 2345567889999998888766
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC------CCcEEEEEcCCCeeEEEee
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK------DSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~ 325 (344)
-|.--|.|-|||+.+.+++..+.... -+-+.|+|||++++|++. |+.++||+. +|..++...
T Consensus 331 ---FGNL~G~mEvwDv~n~K~i~~~~a~~----tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~~~ 398 (566)
T KOG2315|consen 331 ---FGNLPGDMEVWDVPNRKLIAKFKAAN----TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHEKM 398 (566)
T ss_pred ---cCCCCCceEEEeccchhhccccccCC----ceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeehhh
Confidence 35567899999999988888876332 356799999999999864 688999999 666665443
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.8e-08 Score=76.94 Aligned_cols=175 Identities=15% Similarity=0.048 Sum_probs=116.8
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcC
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILASGSKDKTVKMFDYS 209 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~ 209 (344)
..+||.|+..|...+|.+.+. .........|...|+-+.=.-+ .--+..++.|.++++.++.
T Consensus 84 c~~la~gG~~g~fd~~~~~tn-----------------~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~ 146 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTN-----------------DGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVS 146 (344)
T ss_pred ccEEEeccccceeeeecccCc-----------------ccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEe
Confidence 458999999999999998642 1112222333333322221112 2246667889999999987
Q ss_pred CCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------------cCCCCEEEEEeCC
Q psy15157 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------------SSDGRIYCSGSKD 263 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------------~~~~~~l~~~~~d 263 (344)
.+......... .-.+.+++++++++++++.++...|..| +.....+|++..|
T Consensus 147 ~~s~~~~~h~~--~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qd 224 (344)
T KOG4532|consen 147 GDSNKFAVHNQ--NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQD 224 (344)
T ss_pred cCcccceeecc--ccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecC
Confidence 76543332211 1237889999999999988877777665 5667789999999
Q ss_pred CcEEEEeCCCCeEEee----ecccCCCccEEEEEEccCCC--EEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 264 GDIKIWDGVSSKCVAT----FSKAHDGAEISSLTFTRNGK--YLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~----~~~~~~~~~v~~i~~~~~~~--~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
|++.|||++....... -+.+| .+.+..+.|++-|. +|+-.-.-+.+.+-|+++++-...+.
T Consensus 225 g~~~I~DVR~~~tpm~~~sstrp~h-nGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 225 GTCAIYDVRNMATPMAEISSTRPHH-NGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIV 291 (344)
T ss_pred CcEEEEEecccccchhhhcccCCCC-CCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEe
Confidence 9999999987543322 22344 45799999998654 35555556789999999987555443
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=6e-09 Score=87.24 Aligned_cols=137 Identities=12% Similarity=0.118 Sum_probs=109.4
Q ss_pred ceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 121 PCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 121 ~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.++++.|-+. ...||+++.-+.|++||.. ...+++..+..-..+|+++...|.++++++|.
T Consensus 204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~-----------------~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn 266 (412)
T KOG3881|consen 204 WITDIRFLEGSPNYKFATITRYHQVRLYDTR-----------------HQRRPVAQFDFLENPISSTGLTPSGNFIYTGN 266 (412)
T ss_pred eeccceecCCCCCceEEEEecceeEEEecCc-----------------ccCcceeEeccccCcceeeeecCCCcEEEEec
Confidence 4567788876 7799999999999999996 44667788888889999999999999999999
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
.-|.+..||++.++..... ..+..+.++++..+|.+.+++ +++-|..+||+|+.+.+++.
T Consensus 267 ~~g~l~~FD~r~~kl~g~~-~kg~tGsirsih~hp~~~~la-------------------s~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 267 TKGQLAKFDLRGGKLLGCG-LKGITGSIRSIHCHPTHPVLA-------------------SCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred ccchhheecccCceeeccc-cCCccCCcceEEEcCCCceEE-------------------eeccceeEEEeecccchhhh
Confidence 9999999999998765432 234567789999988555554 78999999999999977766
Q ss_pred eecccCCCccEEEEEEccC
Q psy15157 279 TFSKAHDGAEISSLTFTRN 297 (344)
Q Consensus 279 ~~~~~~~~~~v~~i~~~~~ 297 (344)
..... ..+++|.+.++
T Consensus 327 kvYvK---s~lt~il~~~~ 342 (412)
T KOG3881|consen 327 KVYVK---SRLTFILLRDD 342 (412)
T ss_pred hhhhh---ccccEEEecCC
Confidence 55422 34777877654
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.5e-07 Score=85.47 Aligned_cols=142 Identities=13% Similarity=0.124 Sum_probs=94.0
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCC--E
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKD---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHF--V 246 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~--~ 246 (344)
..+..+...+....|+|+|+.|+..+.+ ..|.+||+.+++...... .........|+|+|+.++.. +.++ .
T Consensus 192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~---~~g~~~~~~~SpDG~~la~~~~~~g~~~ 268 (430)
T PRK00178 192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITN---FEGLNGAPAWSPDGSKLAFVLSKDGNPE 268 (430)
T ss_pred eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccC---CCCCcCCeEECCCCCEEEEEEccCCCce
Confidence 3444567788999999999988766543 368999998875432221 22334568999999988753 3343 2
Q ss_pred EEE----------------------EcCCCCEEEEEeC-CC--cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 247 LRL----------------------YSSDGRIYCSGSK-DG--DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 247 i~~----------------------~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+.+ |+|+|+.++..+. +| .|+++|+.+++........ .......|+|||++|
T Consensus 269 Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~---~~~~~~~~Spdg~~i 345 (430)
T PRK00178 269 IYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVG---NYNARPRLSADGKTL 345 (430)
T ss_pred EEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCC---CCccceEECCCCCEE
Confidence 333 3788887766553 33 5778888777644322211 123457899999999
Q ss_pred EEEeCC-C--cEEEEEcCCCee
Q psy15157 302 LSSGKD-S--LVKLWELSSARC 320 (344)
Q Consensus 302 ~s~~~d-g--~i~vwd~~~~~~ 320 (344)
+..+.+ + .|.+||+.+++.
T Consensus 346 ~~~~~~~~~~~l~~~dl~tg~~ 367 (430)
T PRK00178 346 VMVHRQDGNFHVAAQDLQRGSV 367 (430)
T ss_pred EEEEccCCceEEEEEECCCCCE
Confidence 876643 3 488999988764
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.8e-07 Score=77.54 Aligned_cols=184 Identities=15% Similarity=0.208 Sum_probs=119.3
Q ss_pred CCceEEEEECCCCCEEEEEeC----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
......++++|++++|.++.. ++.|..|++.... .....+............++++|++++|
T Consensus 36 ~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~--------------g~L~~~~~~~~~g~~p~~i~~~~~g~~l 101 (345)
T PF10282_consen 36 GENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDT--------------GTLTLLNSVPSGGSSPCHIAVDPDGRFL 101 (345)
T ss_dssp SSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTT--------------TEEEEEEEEEESSSCEEEEEECTTSSEE
T ss_pred CCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCc--------------ceeEEeeeeccCCCCcEEEEEecCCCEE
Confidence 445677889999999988877 5689999886310 1122333333344556789999999988
Q ss_pred EEEeC-CCcEEEEEcCCC-ccccceeee-----------ccccceEEEEEecCCCEEEEEeC-CCEEEEE----------
Q psy15157 195 ASGSK-DKTVKMFDYSKS-SVRKAHKTI-----------QESTFVRCLSFHPCGDYMVVGTD-HFVLRLY---------- 250 (344)
Q Consensus 195 ~s~~~-dg~i~iwd~~~~-~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~~---------- 250 (344)
+++.. +|+|.++++... ......... +......++.++|+|+++++... ...|.+|
T Consensus 102 ~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~ 181 (345)
T PF10282_consen 102 YVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLT 181 (345)
T ss_dssp EEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEE
T ss_pred EEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEE
Confidence 88875 899999999873 332221111 12345678999999999988642 2333333
Q ss_pred ------------------cCCCCEEEEE-eCCCcEEEEeCC--CCe--EEeeec---ccCC-CccEEEEEEccCCCEEEE
Q psy15157 251 ------------------SSDGRIYCSG-SKDGDIKIWDGV--SSK--CVATFS---KAHD-GAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 251 ------------------~~~~~~l~~~-~~dg~i~iwd~~--~~~--~~~~~~---~~~~-~~~v~~i~~~~~~~~l~s 303 (344)
+|+++++++. -.++.|.+|++. .+. .+..+. .... ......|.++|||++|++
T Consensus 182 ~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyv 261 (345)
T PF10282_consen 182 PVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYV 261 (345)
T ss_dssp EEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEE
T ss_pred EeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEE
Confidence 7888877555 456779999887 443 222222 1111 125789999999999887
Q ss_pred Ee-CCCcEEEEEcC
Q psy15157 304 SG-KDSLVKLWELS 316 (344)
Q Consensus 304 ~~-~dg~i~vwd~~ 316 (344)
+. .++.|.+|++.
T Consensus 262 snr~~~sI~vf~~d 275 (345)
T PF10282_consen 262 SNRGSNSISVFDLD 275 (345)
T ss_dssp EECTTTEEEEEEEC
T ss_pred EeccCCEEEEEEEe
Confidence 65 56789999993
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.9e-07 Score=77.18 Aligned_cols=179 Identities=12% Similarity=0.103 Sum_probs=119.5
Q ss_pred ECCCCCEEEEEeC----------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-------CcCCeEEEEEcC
Q psy15157 127 FSIDGQLCATGSV----------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-------HIEEVTCLEFHP 189 (344)
Q Consensus 127 ~s~~~~~l~sg~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~~~~~~ 189 (344)
+||||+.++++.. +..|.+||..+.... ..+.- ....-..++++|
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~------------------~~i~~p~~p~~~~~~~~~~~~ls~ 114 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPI------------------ADIELPEGPRFLVGTYPWMTSLTP 114 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEE------------------eEEccCCCchhhccCccceEEECC
Confidence 9999997776655 788999999764332 22221 112234678899
Q ss_pred CCCEEEEEe-C-CCcEEEEEcCCCccccceeeec-----------------ccc------------ceEEE---------
Q psy15157 190 SAPILASGS-K-DKTVKMFDYSKSSVRKAHKTIQ-----------------EST------------FVRCL--------- 229 (344)
Q Consensus 190 ~~~~l~s~~-~-dg~i~iwd~~~~~~~~~~~~~~-----------------~~~------------~v~~~--------- 229 (344)
+|++|+... . +..|-+.|+.+++....+.... ... .....
T Consensus 115 dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~ 194 (352)
T TIGR02658 115 DNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEY 194 (352)
T ss_pred CCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccc
Confidence 999887666 3 6889999988876443322110 000 00111
Q ss_pred -----EEec-CCCEEEEEeCCCEEEEE-----------------------------------cCCCCEEEEEe-------
Q psy15157 230 -----SFHP-CGDYMVVGTDHFVLRLY-----------------------------------SSDGRIYCSGS------- 261 (344)
Q Consensus 230 -----~~~~-~~~~l~~~~~~~~i~~~-----------------------------------~~~~~~l~~~~------- 261 (344)
.|.+ +|.++++... |.+.+. +++++.++...
T Consensus 195 v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~t 273 (352)
T TIGR02658 195 LINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWT 273 (352)
T ss_pred cccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCcccc
Confidence 1223 5666666554 555542 45677776632
Q ss_pred ---CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCeeEEEeecC
Q psy15157 262 ---KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSG-KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 262 ---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~-~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..+.|.++|..+++.+..+..++ .+..++++||++ +|++.+ .++.|.++|+.+++.+.++..-
T Consensus 274 hk~~~~~V~ViD~~t~kvi~~i~vG~---~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~~v 341 (352)
T TIGR02658 274 HKTASRFLFVVDAKTGKRLRKIELGH---EIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVNQL 341 (352)
T ss_pred ccCCCCEEEEEECCCCeEEEEEeCCC---ceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeeccC
Confidence 12479999999999998887443 589999999999 887666 6788999999999999998443
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.5e-09 Score=106.25 Aligned_cols=150 Identities=21% Similarity=0.386 Sum_probs=118.6
Q ss_pred ecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCC
Q psy15157 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG 254 (344)
Q Consensus 175 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 254 (344)
+..+-..|.++.-||...+.+||+.||.|++|....++........+. ..++.+.|+.+|+.+.++..||.+-+|..+.
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p 2282 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQASP 2282 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccCC
Confidence 445667788999999999999999999999999998887777776655 8899999999999999999999999993221
Q ss_pred ----------------CE----EEEE---eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEE
Q psy15157 255 ----------------RI----YCSG---SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVK 311 (344)
Q Consensus 255 ----------------~~----l~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~ 311 (344)
++ ++++ +.++.+.+||..-.....-+...|.+ .++++++-|..+.|++||.+|.|+
T Consensus 2283 k~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~-gaT~l~~~P~~qllisggr~G~v~ 2361 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDG-GATVLAYAPKHQLLISGGRKGEVC 2361 (2439)
T ss_pred cceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCC-CceEEEEcCcceEEEecCCcCcEE
Confidence 12 2222 45678999996533222222235654 489999999999999999999999
Q ss_pred EEEcCCCeeEEEeec
Q psy15157 312 LWELSSARCLIAYTG 326 (344)
Q Consensus 312 vwd~~~~~~~~~~~~ 326 (344)
+||++..+.++.|+.
T Consensus 2362 l~D~rqrql~h~~~~ 2376 (2439)
T KOG1064|consen 2362 LFDIRQRQLRHTFQA 2376 (2439)
T ss_pred EeehHHHHHHHHhhh
Confidence 999999888777754
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.1e-07 Score=91.24 Aligned_cols=197 Identities=15% Similarity=0.207 Sum_probs=120.7
Q ss_pred ceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEEEEEe
Q psy15157 121 PCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPILASGS 198 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~ 198 (344)
....++++++++.|+.+. ..+.|+++|..+.................++.. .... .-..-.+++++| ++.++++.+
T Consensus 625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~-~~~~-~ln~P~gVa~dp~~g~LyVad~ 702 (1057)
T PLN02919 625 RPQGLAYNAKKNLLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKK-GTSQ-VLNSPWDVCFEPVNEKVYIAMA 702 (1057)
T ss_pred CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChh-hhHh-hcCCCeEEEEecCCCeEEEEEC
Confidence 468889998887655554 456799999865432111000000000000000 0000 012235889999 566778888
Q ss_pred CCCcEEEEEcCCCccccceeee-------------ccccceEEEEEecCCCEEEEE-eCCCEEEEEc-------------
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTI-------------QESTFVRCLSFHPCGDYMVVG-TDHFVLRLYS------------- 251 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~~------------- 251 (344)
.++.|++||..++.... +... ..-.....++++|+|+.++++ +.++.|++|+
T Consensus 703 ~~~~I~v~d~~~g~v~~-~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~ 781 (1057)
T PLN02919 703 GQHQIWEYNISDGVTRV-FSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGD 781 (1057)
T ss_pred CCCeEEEEECCCCeEEE-EecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecc
Confidence 88999999987764321 1000 011235678999999866554 4445665553
Q ss_pred -------------------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-----------CCccE
Q psy15157 252 -------------------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-----------DGAEI 289 (344)
Q Consensus 252 -------------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v 289 (344)
++|.++++-+.++.|++||..++........+. .....
T Consensus 782 ~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P 861 (1057)
T PLN02919 782 PTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEP 861 (1057)
T ss_pred cccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCc
Confidence 445667777778899999988876553321110 01246
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
..++++++|+.+++.+.++.|++||+.+++.
T Consensus 862 ~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 862 AGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred eEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 7899999999989989999999999999865
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.1e-08 Score=80.84 Aligned_cols=195 Identities=18% Similarity=0.293 Sum_probs=127.4
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC------------cCCeEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH------------IEEVTCL 185 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h------------~~~v~~~ 185 (344)
..+.|+++.|...|.|++||...|.|.+|.-+.... -..+....+++| ...|..+
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~-------------ceykf~teFQshe~EFDYLkSleieEKin~I 91 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYG-------------CEYKFFTEFQSHELEFDYLKSLEIEEKINAI 91 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccc-------------cchhhhhhhcccccchhhhhhccHHHHhhhe
Confidence 456799999999999999999999999998753210 001112223333 2457888
Q ss_pred EEcCCCC--EEEEEeCCCcEEEEEcCCCccccc-----------------------------------------eeeecc
Q psy15157 186 EFHPSAP--ILASGSKDKTVKMFDYSKSSVRKA-----------------------------------------HKTIQE 222 (344)
Q Consensus 186 ~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~-----------------------------------------~~~~~~ 222 (344)
.|..++. .++..+.|.+|++|.+........ +....|
T Consensus 92 ~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH 171 (460)
T COG5170 92 EWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAH 171 (460)
T ss_pred eeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccc
Confidence 8876543 677778899999999754311000 001234
Q ss_pred ccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------------------C-CCCEEEEEeCCCcEEEEe
Q psy15157 223 STFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------------------S-DGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 223 ~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------------------~-~~~~l~~~~~dg~i~iwd 270 (344)
..-+.++.|+.+...+++ .++-.|.+|. | ....+.-.+..|.|++-|
T Consensus 172 ~yhiNSiS~NsD~et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~D 250 (460)
T COG5170 172 PYHINSISFNSDKETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLND 250 (460)
T ss_pred eeEeeeeeecCchheeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehh
Confidence 555778888887776665 4566788881 2 234566678899999999
Q ss_pred CCCCeEE------ee--eccc-C-----CCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC-eeEEEeecC
Q psy15157 271 GVSSKCV------AT--FSKA-H-----DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-RCLIAYTGA 327 (344)
Q Consensus 271 ~~~~~~~------~~--~~~~-~-----~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~ 327 (344)
++..... .. +.+. + -...|..+.|+++|+|+++-+ --+|++||++.. .++.++.-|
T Consensus 251 lRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~~h 321 (460)
T COG5170 251 LRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIPMH 321 (460)
T ss_pred hhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCCceeechH
Confidence 9843211 11 1000 0 013588999999999998776 467999999874 567776443
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-07 Score=85.20 Aligned_cols=141 Identities=15% Similarity=0.136 Sum_probs=90.9
Q ss_pred EecCCcCCeEEEEEcCCCCEEEEEeC-CC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEE-EeCCCEEEE
Q psy15157 174 TLYDHIEEVTCLEFHPSAPILASGSK-DK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV-GTDHFVLRL 249 (344)
Q Consensus 174 ~~~~h~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~i~~ 249 (344)
.+..+...+.+..|+|||+.|+..+. ++ .|.+||+.+++...... .........|+|+|+.|+. .+.++...+
T Consensus 212 ~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~---~~g~~~~~~wSPDG~~La~~~~~~g~~~I 288 (448)
T PRK04792 212 MLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTS---FPGINGAPRFSPDGKKLALVLSKDGQPEI 288 (448)
T ss_pred EeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecC---CCCCcCCeeECCCCCEEEEEEeCCCCeEE
Confidence 44456678889999999998776544 33 58889988765422211 1223346799999998875 445554333
Q ss_pred ------------------------EcCCCCEEEEEeC-CC--cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEE
Q psy15157 250 ------------------------YSSDGRIYCSGSK-DG--DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLL 302 (344)
Q Consensus 250 ------------------------~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 302 (344)
|+|+|+.++..+. ++ .|+++|+.+++........ .......|+|||++|+
T Consensus 289 y~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g---~~~~~~~~SpDG~~l~ 365 (448)
T PRK04792 289 YVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEG---EQNLGGSITPDGRSMI 365 (448)
T ss_pred EEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCC---CCCcCeeECCCCCEEE
Confidence 3788988766553 33 4777788777654322111 1234578999999987
Q ss_pred EEeC-CC--cEEEEEcCCCee
Q psy15157 303 SSGK-DS--LVKLWELSSARC 320 (344)
Q Consensus 303 s~~~-dg--~i~vwd~~~~~~ 320 (344)
..+. ++ .|.++|+.+++.
T Consensus 366 ~~~~~~g~~~I~~~dl~~g~~ 386 (448)
T PRK04792 366 MVNRTNGKFNIARQDLETGAM 386 (448)
T ss_pred EEEecCCceEEEEEECCCCCe
Confidence 7654 33 466678887764
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=3e-08 Score=87.09 Aligned_cols=148 Identities=21% Similarity=0.396 Sum_probs=100.1
Q ss_pred CCcCCeEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCccccceeeec--------------------------c-------
Q psy15157 177 DHIEEVTCLEFHPSAPI-LASGSKDKTVKMFDYSKSSVRKAHKTIQ--------------------------E------- 222 (344)
Q Consensus 177 ~h~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------------------~------- 222 (344)
.|....+.|..+|||++ +++|...-.|++||+..-.+........ |
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 46677889999999995 5778888999999987643211100000 0
Q ss_pred ----ccceEEEEEec-CCCEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCCCcEEEEeCCCCe
Q psy15157 223 ----STFVRCLSFHP-CGDYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKDGDIKIWDGVSSK 275 (344)
Q Consensus 223 ----~~~v~~~~~~~-~~~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~i~iwd~~~~~ 275 (344)
+..-..++++. ....+++|+.....++= ++-..+|++|+.+|.|.+||.++..
T Consensus 129 ~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ks 208 (703)
T KOG2321|consen 129 RTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKS 208 (703)
T ss_pred eeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhh
Confidence 11122333332 33444555544444431 4556788999999999999999876
Q ss_pred EEeeeccc---------CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 276 CVATFSKA---------HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 276 ~~~~~~~~---------~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
.+..+... .....|+++.|+.+|-.+++|+.+|.|.|||+++.+++..-
T Consensus 209 rv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k 266 (703)
T KOG2321|consen 209 RVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK 266 (703)
T ss_pred hheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec
Confidence 65554321 11234999999999999999999999999999998876543
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.5e-08 Score=80.92 Aligned_cols=199 Identities=16% Similarity=0.255 Sum_probs=129.2
Q ss_pred CCceEEEEECCCCC--EEEEEeCCCeEEEEEcCCcccccc---CCCCC----------CcC---C-CCCCceEEEe-cCC
Q psy15157 119 KSPCRAGAFSIDGQ--LCATGSVDASIKILDVDRMLAKSS---MESSE----------PQN---D-QQGHPVIRTL-YDH 178 (344)
Q Consensus 119 ~~~v~~~~~s~~~~--~l~sg~~dg~v~iwd~~~~~~~~~---~~~~~----------~~~---~-~~~~~~~~~~-~~h 178 (344)
...|..+.|.++++ .++..+.|.+|++|.+........ ..... +.. + .....+.+.+ ..|
T Consensus 84 eEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaH 163 (433)
T KOG1354|consen 84 EEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAH 163 (433)
T ss_pred hhhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccc
Confidence 35789999998665 677777899999999864322110 00000 000 0 0001112222 468
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccce-ee-----eccccceEEEEEecC-CCEEEEEeCCCEEEEE-
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH-KT-----IQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY- 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~-----~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~- 250 (344)
.--|+++.++.|+..++|+. |=.|.+|++.-......+ .. ..-..-|++..|+|. ...++..+..|.|++.
T Consensus 164 tyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcD 242 (433)
T KOG1354|consen 164 TYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCD 242 (433)
T ss_pred eeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEee
Confidence 88899999999999888754 778999998653211111 11 111345788899995 5677888899999985
Q ss_pred --------------------------------------cCCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccC-------
Q psy15157 251 --------------------------------------SSDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAH------- 284 (344)
Q Consensus 251 --------------------------------------~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~------- 284 (344)
+.+|+++++-+. -+|++||+.. .+++.++.-+.
T Consensus 243 mR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc 321 (433)
T KOG1354|consen 243 MRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLC 321 (433)
T ss_pred chhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHH
Confidence 678899876543 5899999843 34444432110
Q ss_pred ---CC---ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 285 ---DG---AEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 285 ---~~---~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+. ..-..++|+-++.+++||+.....+++++..|.
T Consensus 322 ~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 322 SLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred HHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence 00 113567899899999999999999999976653
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.2e-08 Score=81.04 Aligned_cols=189 Identities=16% Similarity=0.260 Sum_probs=129.8
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.++||.+.|++...-|-..-+++.+.|.+++||--..- .+-++. .......+++++.+.++...
T Consensus 19 ~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds--------------~q~wps--I~~~mP~~~~~~~y~~e~~~ 82 (404)
T KOG1409|consen 19 KIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDS--------------GQYWPS--IYHYMPSPCSAMEYVSESRR 82 (404)
T ss_pred hhcCchhhhhhheeccCCCCeEEccccceeeeEEeccc--------------cccCch--hhhhCCCCceEeeeeccceE
Confidence 46899999999998887888999999999999964321 011111 11223467889999999999
Q ss_pred EEEEeCCCcEEEEEcCCC--ccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKS--SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL---------------------- 249 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---------------------- 249 (344)
|+.|-.+|++.-+.+... +.........|..++..+-|+-...++++.+.|..+.-
T Consensus 83 L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~ 162 (404)
T KOG1409|consen 83 LYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQ 162 (404)
T ss_pred EEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCc
Confidence 999999999998876432 11111112234444544444444444444433333221
Q ss_pred ------------------------------------------EcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCc
Q psy15157 250 ------------------------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287 (344)
Q Consensus 250 ------------------------------------------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 287 (344)
|++....+++|..|..+.+||+--.+-+.....+|. .
T Consensus 163 ~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~-~ 241 (404)
T KOG1409|consen 163 FDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHN-D 241 (404)
T ss_pred eeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccch-h
Confidence 478889999999999999999876554443333444 3
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
.|..+...+--+.+++++.||.|.+||+...+
T Consensus 242 kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 242 KVQALSYAQHTRQLISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred hhhhhhhhhhheeeeeccCCCeEEEEecccee
Confidence 58888888888899999999999999996543
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.8e-09 Score=59.86 Aligned_cols=36 Identities=33% Similarity=0.488 Sum_probs=34.1
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd 147 (344)
...+.+|.+.|++++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 4 VRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 457899999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.6e-06 Score=70.46 Aligned_cols=186 Identities=15% Similarity=0.268 Sum_probs=123.1
Q ss_pred ceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC----------eEEEEEcC
Q psy15157 121 PCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE----------VTCLEFHP 189 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~ 189 (344)
+...++++++|++++++.. .|.|.++-+....... .......|.+. +-+..+.|
T Consensus 90 ~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~---------------~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP 154 (346)
T COG2706 90 PPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQ---------------PVVQVVKHTGSGPHERQESPHVHSANFTP 154 (346)
T ss_pred CCeEEEECCCCCEEEEEEccCceEEEEEcccCCccc---------------cceeeeecCCCCCCccccCCccceeeeCC
Confidence 3378899999999999876 5789999886421111 01011112222 67788999
Q ss_pred CCCEEEEEeC-CCcEEEEEcCCCcccccee-eeccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------
Q psy15157 190 SAPILASGSK-DKTVKMFDYSKSSVRKAHK-TIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------- 250 (344)
++++|+++.. -..|.+|++..+.+..... ........+.|.|+|++++.++.+ -+++|.+|
T Consensus 155 ~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~ 234 (346)
T COG2706 155 DGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTID 234 (346)
T ss_pred CCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeec
Confidence 9998887754 3569999999876533221 124556678999999999987655 47777777
Q ss_pred -----------------cCCCCEEEEEeCC-CcEEEEeCCC--CeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-Cc
Q psy15157 251 -----------------SSDGRIYCSGSKD-GDIKIWDGVS--SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-SL 309 (344)
Q Consensus 251 -----------------~~~~~~l~~~~~d-g~i~iwd~~~--~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-g~ 309 (344)
+++|++|.++... ..|-+|.+.. ++....-....++.......|++.|++|+++..+ ..
T Consensus 235 tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~ 314 (346)
T COG2706 235 TLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDN 314 (346)
T ss_pred cCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCc
Confidence 7899999876543 3577776543 4322221112222336889999999999988755 45
Q ss_pred EEEEEcC--CCeeE
Q psy15157 310 VKLWELS--SARCL 321 (344)
Q Consensus 310 i~vwd~~--~~~~~ 321 (344)
|.+|... +|++-
T Consensus 315 i~vf~~d~~TG~L~ 328 (346)
T COG2706 315 ITVFERDKETGRLT 328 (346)
T ss_pred EEEEEEcCCCceEE
Confidence 7777664 45543
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.8e-09 Score=59.85 Aligned_cols=38 Identities=32% Similarity=0.636 Sum_probs=35.9
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 207 (344)
+++.++.+|.+.|++++|+|++.+|++|+.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 45788999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.4e-09 Score=98.39 Aligned_cols=176 Identities=19% Similarity=0.254 Sum_probs=118.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.++.|...-+|++|+-+.+.|+.|+-.|.|++|++.++ ........|.++|+-+.-+.+|..
T Consensus 1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG------------------~~e~s~ncH~SavT~vePs~dgs~ 1157 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSG------------------SMEESVNCHQSAVTLVEPSVDGST 1157 (1516)
T ss_pred hhhccccceeeEEeecCCceEEeeeccceEEEEEccCc------------------cccccccccccccccccccCCcce
Confidence 46789999999999999999999999999999999754 334456789999999999989886
Q ss_pred EEEEe-CCC-cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 194 LASGS-KDK-TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 194 l~s~~-~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
+++.+ ... ...+|++... ....+.+ ..-.++.|+.....-++|+......+|
T Consensus 1158 ~Ltsss~S~PlsaLW~~~s~-~~~~Hsf----~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~ 1232 (1516)
T KOG1832|consen 1158 QLTSSSSSSPLSALWDASST-GGPRHSF----DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYS 1232 (1516)
T ss_pred eeeeccccCchHHHhccccc-cCccccc----cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhh
Confidence 55443 333 5779998652 1112221 223456676654444555444444444
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+|...+++ .|| .+||.+..+.++.|..... --.-.|+|+|..++.-+ -|||+++-+.++..
T Consensus 1233 ~n~a~FsP~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~---~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~V 1299 (1516)
T KOG1832|consen 1233 NNLAHFSPCDTLIL---NDG--VLWDVRIPEAIHRFDQFTD---YGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSV 1299 (1516)
T ss_pred ccccccCCCcceEe---eCc--eeeeeccHHHHhhhhhhee---cccccccCCCceEEeec-----hhhhhHHHHHHhcC
Confidence 45555544 244 4688888777777653221 12235888888888877 48998887766554
Q ss_pred e
Q psy15157 325 T 325 (344)
Q Consensus 325 ~ 325 (344)
.
T Consensus 1300 P 1300 (1516)
T KOG1832|consen 1300 P 1300 (1516)
T ss_pred c
Confidence 3
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.6e-07 Score=82.37 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=70.1
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC--
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK-- 199 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-- 199 (344)
=+-+.|||-|.||+|-..-| |.+|-=.+ ...++.+ .|. .|.-+.|||..++|+|=+.
T Consensus 213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~------------------f~r~~RF-~Hp-~Vq~idfSP~EkYLVT~s~~p 271 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG-IALWGGES------------------FDRIQRF-YHP-GVQFIDFSPNEKYLVTYSPEP 271 (698)
T ss_pred eeeEEecCCceEEEEEeccc-eeeecCcc------------------HHHHHhc-cCC-CceeeecCCccceEEEecCCc
Confidence 36678999999999998877 88995432 1222222 243 4788999999999998553
Q ss_pred ---------CCcEEEEEcCCCccccceeeeccccce-EEEEEecCCCEEEEEeCC
Q psy15157 200 ---------DKTVKMFDYSKSSVRKAHKTIQESTFV-RCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 200 ---------dg~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~~ 244 (344)
...++|||+.+|...+.+........+ .-+.||-+++|+|....+
T Consensus 272 ~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~ 326 (698)
T KOG2314|consen 272 IIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN 326 (698)
T ss_pred cccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccc
Confidence 257999999999887777654332222 235677777777765553
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.3e-08 Score=88.40 Aligned_cols=162 Identities=14% Similarity=0.181 Sum_probs=113.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
..+.+.|++++ ++.|+-|+.+|.|++++... .+ .+...|... ..+|.+++||
T Consensus 38 ~~D~is~~av~--~~~~~~GtH~g~v~~~~~~~-------------------~~-~~~~~~s~~------~~~Gey~asC 89 (846)
T KOG2066|consen 38 QNDAISCCAVH--DKFFALGTHRGAVYLTTCQG-------------------NP-KTNFDHSSS------ILEGEYVASC 89 (846)
T ss_pred hhhHHHHHHhh--cceeeeccccceEEEEecCC-------------------cc-ccccccccc------ccCCceEEEe
Confidence 35678888887 78999999999999999852 11 233334333 5678999999
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCV 277 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 277 (344)
+.||+|.|-.+-+.+....+. -..++.+++++|+-.. ...+.+++|+..| +.++.-+-....
T Consensus 90 S~DGkv~I~sl~~~~~~~~~d---f~rpiksial~Pd~~~--------------~~sk~fv~GG~ag-lvL~er~wlgnk 151 (846)
T KOG2066|consen 90 SDDGKVVIGSLFTDDEITQYD---FKRPIKSIALHPDFSR--------------QQSKQFVSGGMAG-LVLSERNWLGNK 151 (846)
T ss_pred cCCCcEEEeeccCCccceeEe---cCCcceeEEeccchhh--------------hhhhheeecCcce-EEEehhhhhcCc
Confidence 999999999998876544443 3567899999996110 1345566777777 666654321111
Q ss_pred eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.....+...++|.++.|. |++++=++++| |+|||+.+++.+..++...
T Consensus 152 ~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~ 199 (846)
T KOG2066|consen 152 DSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPS 199 (846)
T ss_pred cceeeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCC
Confidence 111212333679999995 88998888777 7999999999888887654
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.4e-08 Score=82.51 Aligned_cols=88 Identities=19% Similarity=0.392 Sum_probs=71.4
Q ss_pred EEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc
Q psy15157 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS 251 (344)
Q Consensus 172 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~ 251 (344)
...+.+|-..+++++|+||+++++++..|..|++-.....-.+..+. .+|...|..++.-+
T Consensus 144 ~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfc-lGH~eFVS~isl~~------------------ 204 (390)
T KOG3914|consen 144 CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFC-LGHKEFVSTISLTD------------------ 204 (390)
T ss_pred cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhc-cccHhheeeeeecc------------------
Confidence 34567899999999999999999999999999998876654444443 56888898888754
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
+..|++||.|+++++||+++|+++.++
T Consensus 205 --~~~LlS~sGD~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 205 --NYLLLSGSGDKTLRLWDITSGKLLDTC 231 (390)
T ss_pred --CceeeecCCCCcEEEEecccCCccccc
Confidence 344568999999999999999887655
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.4e-06 Score=74.99 Aligned_cols=176 Identities=9% Similarity=0.007 Sum_probs=106.6
Q ss_pred ceEEEEECCCCCE-EEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE-
Q psy15157 121 PCRAGAFSIDGQL-CATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA- 195 (344)
Q Consensus 121 ~v~~~~~s~~~~~-l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~- 195 (344)
.+....|+|||+. ++..+.+ ..|.++|+.++ +. ..+....+......|+|||+.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg------------------~~-~~lt~~~g~~~~~~~SPDG~~la~ 249 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTG------------------KK-EKIASSQGMLVVSDVSKDGSKLLL 249 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCC------------------cE-EEEecCCCcEEeeEECCCCCEEEE
Confidence 6788999999984 6654443 45777787532 11 22222445566778999998554
Q ss_pred EEeCC--CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy15157 196 SGSKD--KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 196 s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~ 273 (344)
+.+.+ ..|.++|+.++...... ..........|+|+|+.|+..+.. .....|.+.|+.+
T Consensus 250 ~~~~~g~~~Iy~~dl~~g~~~~LT---~~~~~d~~p~~SPDG~~I~F~Sdr----------------~g~~~Iy~~dl~~ 310 (419)
T PRK04043 250 TMAPKGQPDIYLYDTNTKTLTQIT---NYPGIDVNGNFVEDDKRIVFVSDR----------------LGYPNIFMKKLNS 310 (419)
T ss_pred EEccCCCcEEEEEECCCCcEEEcc---cCCCccCccEECCCCCEEEEEECC----------------CCCceEEEEECCC
Confidence 44444 45777788776533221 112122345788988877764421 1123688889888
Q ss_pred CeEEeeecccCCCccEEEEEEccCCCEEEEEeCC---------CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 274 SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD---------SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 274 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
++..+...... . ...|+|||++|+..+.. ..|.+.|+.++.. ..+...+ .....+|++|++
T Consensus 311 g~~~rlt~~g~---~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~~---~~~~p~~SPDG~ 380 (419)
T PRK04043 311 GSVEQVVFHGK---N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTANG---VNQFPRFSSDGG 380 (419)
T ss_pred CCeEeCccCCC---c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCCC---CcCCeEECCCCC
Confidence 77644332111 1 24899999998766543 3688889988764 4444332 334577788775
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=8.9e-08 Score=76.28 Aligned_cols=187 Identities=19% Similarity=0.223 Sum_probs=108.5
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCC
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDK 201 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 201 (344)
|+.+.|+- ...|+++..++.+......+..+.....- .........+..|.++-.+-+.+-.++-++++..||
T Consensus 39 ~~~~~~v~-~~~lf~~e~~~~~ss~g~~r~~~~~~~~r------t~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg 111 (319)
T KOG4714|consen 39 LSKVSLSA-EYILFTGETSSQIISLGKGRGRCISLWER------DDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADG 111 (319)
T ss_pred EEEeechh-hheeecccchhheeeeccceEEEechhhc------ccCcCceeeeeccCCCCCcccccccCCceEecCCCc
Confidence 55566653 44677777777777666654433322110 111122333444554433334444566799999999
Q ss_pred cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-----CCCEEEEE------------------------cC
Q psy15157 202 TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-----DHFVLRLY------------------------SS 252 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~~i~~~------------------------~~ 252 (344)
.+.+++.+.-. ....+........-+.+....+..+.++. .-+..+.| ..
T Consensus 112 ~~~v~s~~~~~-~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~ 190 (319)
T KOG4714|consen 112 SLAVFSTDKDL-ALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPA 190 (319)
T ss_pred eEEEEechHHH-hhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcc
Confidence 99999976521 00011000000011111112222222211 01111111 23
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCC
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..+.+++|+.||.+.+||.+.......+...|. ++|+-+-|+| ++..|+++++||.+.-||..+
T Consensus 191 qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk-~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 191 QQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHK-AEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cccEEEEecCCCeEEEEEcccccchHHHHHHhh-hhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 457788999999999999999876666666676 5799999999 788999999999999999864
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=3e-08 Score=84.66 Aligned_cols=190 Identities=16% Similarity=0.215 Sum_probs=132.4
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
|.+.|+.+..+. .+++.+++.||.++.|.-.. ...-..+..+..|.+.|.+++.+-++.++.|.
T Consensus 8 hrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~---------------isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv 71 (558)
T KOG0882|consen 8 HRDVITHVFPTK-AKFIIQASLDGHKKFWKKSR---------------ISGVEFVKHFRAHLGVILSLAVSYDGWLFRSV 71 (558)
T ss_pred ccceeeeEeeeh-hheEEeeecchhhhhcCCCC---------------ccceeehhhhHHHHHHHHhhhccccceeEeec
Confidence 888888887664 67999999999999997532 12334566778899999999999999999998
Q ss_pred eC-CCcEEEEEcCCCccccceeeeccccceEEEEEecCC---CEEEEE-eCCCEEEEE----------------------
Q psy15157 198 SK-DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG---DYMVVG-TDHFVLRLY---------------------- 250 (344)
Q Consensus 198 ~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~-~~~~~i~~~---------------------- 250 (344)
+. |..++++|+.+-.....++...-...+.++ .++ | ..++++ .+++.+.++
T Consensus 72 ~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv-~sk-Gd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~ 149 (558)
T KOG0882|consen 72 EDPDHSVKVFDVENFDMINMIKLVDLPGFAEWV-TSK-GDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKK 149 (558)
T ss_pred cCcccceeEEEeeccchhhhcccccCCCceEEe-cCC-CCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEE
Confidence 87 999999999876554444333222222211 111 2 122222 234444444
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCC------CeEEe---------eecccCCCccEEEEEEccCCCEEEEEeCCCcEEE
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVS------SKCVA---------TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~------~~~~~---------~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v 312 (344)
.+.+..+++....|.|.-|.... .+... .+... .....++.|+|+|..+.+-+.|..|++
T Consensus 150 i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~--Kt~pts~Efsp~g~qistl~~DrkVR~ 227 (558)
T KOG0882|consen 150 IRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKA--KTEPTSFEFSPDGAQISTLNPDRKVRG 227 (558)
T ss_pred EEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhccccc--ccCccceEEccccCcccccCcccEEEE
Confidence 56667777888889999998762 11111 11111 235789999999999999999999999
Q ss_pred EEcCCCeeEEEeecC
Q psy15157 313 WELSSARCLIAYTGA 327 (344)
Q Consensus 313 wd~~~~~~~~~~~~~ 327 (344)
+++++|+.++.+...
T Consensus 228 F~~KtGklvqeiDE~ 242 (558)
T KOG0882|consen 228 FVFKTGKLVQEIDEV 242 (558)
T ss_pred EEeccchhhhhhhcc
Confidence 999999988877653
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.4e-06 Score=77.16 Aligned_cols=161 Identities=12% Similarity=0.067 Sum_probs=89.1
Q ss_pred CCCceEEEEECCCCCEEEEEeC-CC----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSV-DA----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.....+|||||+.|+..+. +| .+.+|++..+ ......+....+.+.....+|+|||+
T Consensus 229 ~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g---------------~~g~~~~lt~~~~~~~~~p~wSPDG~ 293 (428)
T PRK01029 229 LQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETG---------------AIGKPRRLLNEAFGTQGNPSFSPDGT 293 (428)
T ss_pred CCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccC---------------CCCcceEeecCCCCCcCCeEECCCCC
Confidence 3445566789999998876553 23 3444665421 01122222223333446779999999
Q ss_pred EEEEEe-CCCcEEEEEc--CCCccccceeeeccccceEEEEEecCCCEEEEEeCC---CEEEE-----------------
Q psy15157 193 ILASGS-KDKTVKMFDY--SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH---FVLRL----------------- 249 (344)
Q Consensus 193 ~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~i~~----------------- 249 (344)
.|+..+ .+|...+|.+ ..... ...........+....|+|+|++|+....+ ..+.+
T Consensus 294 ~Laf~s~~~g~~~ly~~~~~~~g~-~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~ 372 (428)
T PRK01029 294 RLVFVSNKDGRPRIYIMQIDPEGQ-SPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPEN 372 (428)
T ss_pred EEEEEECCCCCceEEEEECccccc-ceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCC
Confidence 766554 5676666654 32111 111111223456778999999998876532 23444
Q ss_pred -----EcCCCCEEEEEeC---CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC
Q psy15157 250 -----YSSDGRIYCSGSK---DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN 297 (344)
Q Consensus 250 -----~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 297 (344)
|+|+|+.|+.... ...|.+||+..++...... . . +.+...+|+|-
T Consensus 373 ~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~-~-~-g~~~~p~Ws~~ 425 (428)
T PRK01029 373 KESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVI-G-S-GEKRFPSWGAF 425 (428)
T ss_pred ccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-C-C-CcccCceecCC
Confidence 3677776654332 2457777877665443332 1 1 23556677764
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.9e-07 Score=79.95 Aligned_cols=194 Identities=18% Similarity=0.126 Sum_probs=140.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA- 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 191 (344)
.+..|-+.|.+++.+.+|.++.|++. |..++++|+++..... ...+..-.+.+.+ ..++..
T Consensus 48 hFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~Dmin----------------miKL~~lPg~a~w-v~skGd~ 110 (558)
T KOG0882|consen 48 HFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMIN----------------MIKLVDLPGFAEW-VTSKGDK 110 (558)
T ss_pred hhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhh----------------hcccccCCCceEE-ecCCCCe
Confidence 35688899999999999999999888 9999999997532221 1111111122211 112221
Q ss_pred --CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 192 --PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 192 --~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
.+-++.-.+|.|.++|-....+...+...-|..+|.++.+++.++.+++....|.|.-|
T Consensus 111 ~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~ 190 (558)
T KOG0882|consen 111 ISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKH 190 (558)
T ss_pred eeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccc
Confidence 12334445799999997766544445445688899999999999999999999999998
Q ss_pred -------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecc-----------------------------
Q psy15157 251 -------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK----------------------------- 282 (344)
Q Consensus 251 -------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------------------------- 282 (344)
+|+|..+.+-+.|..|++++.++++.++.+..
T Consensus 191 eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmavere 270 (558)
T KOG0882|consen 191 ETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERE 270 (558)
T ss_pred cchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhh
Confidence 78888899999999999999999887655421
Q ss_pred --cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 283 --AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 283 --~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.+....-+.+.|+..|++|+-|+-=| |++.++.++++++.+.
T Consensus 271 lek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~g 314 (558)
T KOG0882|consen 271 LEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILG 314 (558)
T ss_pred HhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEec
Confidence 11112245677888899999887655 8999999999988874
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.7e-08 Score=87.89 Aligned_cols=187 Identities=15% Similarity=0.193 Sum_probs=124.4
Q ss_pred ceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
-..++.||...|+.+.|++. ...+++++.|..+..||+++ ...++.....-......++|+-
T Consensus 106 Ief~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rS-----------------p~~p~ys~~~w~s~asqVkwny 168 (1081)
T KOG0309|consen 106 IEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRS-----------------PHRPFYSTSSWRSAASQVKWNY 168 (1081)
T ss_pred eEEEEecCccceeccccCCCCCcceeeccccccceeeeccC-----------------CCcceeeeecccccCceeeecc
Confidence 34568999999999999985 45899999999999999973 2334444444455667899988
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEEcC----------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLYSS---------------- 252 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~~~---------------- 252 (344)
....+.+.+..+.|++||.+.+.... .....+...++.+.|+. ....+..++.|+++++|+.
T Consensus 169 k~p~vlasshg~~i~vwd~r~gs~pl-~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~p 247 (1081)
T KOG0309|consen 169 KDPNVLASSHGNDIFVWDLRKGSTPL-CSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFP 247 (1081)
T ss_pred cCcchhhhccCCceEEEeccCCCcce-EEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCc
Confidence 66666666778899999999876422 23334666777788765 3556778889999999921
Q ss_pred ----------CCCEEEEEeCCCcEEEEe---------CCC-CeEEeeecccCCCccEEEEEEccCC----------CEEE
Q psy15157 253 ----------DGRIYCSGSKDGDIKIWD---------GVS-SKCVATFSKAHDGAEISSLTFTRNG----------KYLL 302 (344)
Q Consensus 253 ----------~~~~l~~~~~dg~i~iwd---------~~~-~~~~~~~~~~~~~~~v~~i~~~~~~----------~~l~ 302 (344)
+|.++.---.+..+.+++ ..+ ...++.+. +|.. .|....|-..+ -.|+
T Consensus 248 iw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~-GH~D-~V~eFlWR~r~e~~~d~d~rdfQLV 325 (1081)
T KOG0309|consen 248 IWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFV-GHDD-VVLEFLWRKRKECDGDYDSRDFQLV 325 (1081)
T ss_pred ceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeec-Ccch-HHHHHhhhhcccccCCCCccceeEE
Confidence 122221111122333333 222 24566776 3432 35444443322 2589
Q ss_pred EEeCCCcEEEEEcCC
Q psy15157 303 SSGKDSLVKLWELSS 317 (344)
Q Consensus 303 s~~~dg~i~vwd~~~ 317 (344)
|=+.|..+++|-+.+
T Consensus 326 TWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 326 TWSKDQTLRLWPIDS 340 (1081)
T ss_pred EeecCCceEeeeccH
Confidence 999999999998854
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.5e-07 Score=78.73 Aligned_cols=147 Identities=22% Similarity=0.306 Sum_probs=111.9
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
+...++-|...|.|.+|++..+.... ...-..|.+.|+++.++.+-..|.|++.|+.+..|+..
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~it~----------------~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~ 132 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGEITA----------------KLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEK 132 (541)
T ss_pred CceEEEeecCCccEEEEEecCCeEEE----------------EEecCCCCCcceeeecccccCceEecCCceeEEEEecc
Confidence 44578888889999999986432111 22235799999999999999999999999999999998
Q ss_pred CCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccE
Q psy15157 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEI 289 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 289 (344)
..+..+... .....+.+++.+|||..++ +++ +.|++||+++++.+..|. +|. ++|
T Consensus 133 ~~~~~~~~~--~~~~~~~sl~is~D~~~l~-------------------~as--~~ik~~~~~~kevv~~ft-gh~-s~v 187 (541)
T KOG4547|consen 133 EKVIIRIWK--EQKPLVSSLCISPDGKILL-------------------TAS--RQIKVLDIETKEVVITFT-GHG-SPV 187 (541)
T ss_pred cceeeeeec--cCCCccceEEEcCCCCEEE-------------------ecc--ceEEEEEccCceEEEEec-CCC-cce
Confidence 876655443 3445578888988766665 333 579999999999999997 443 589
Q ss_pred EEEEEccC-----CCEEEEE-eCCCcEEEEEcCC
Q psy15157 290 SSLTFTRN-----GKYLLSS-GKDSLVKLWELSS 317 (344)
Q Consensus 290 ~~i~~~~~-----~~~l~s~-~~dg~i~vwd~~~ 317 (344)
+++.|.-+ |.+++++ ..+..|.+|-+..
T Consensus 188 ~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 188 RTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred EEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 99999877 7777665 4566688887755
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.2e-05 Score=78.78 Aligned_cols=185 Identities=14% Similarity=0.198 Sum_probs=124.9
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
..+.|.++.|-++...++.+..+|.|.+...+.. .....+.....-...|.+++||||+.+|+..
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~---------------~~~~~~E~VG~vd~GI~a~~WSPD~Ella~v 138 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPD---------------PDEDEIEIVGSVDSGILAASWSPDEELLALV 138 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCC---------------CCCceeEEEEEEcCcEEEEEECCCcCEEEEE
Confidence 4578999999999999999999999999933210 1112233334456789999999999999999
Q ss_pred eCCCcEEEEEcCC-----------------------Cccccce---------------ee-------eccccceEEEEEe
Q psy15157 198 SKDKTVKMFDYSK-----------------------SSVRKAH---------------KT-------IQESTFVRCLSFH 232 (344)
Q Consensus 198 ~~dg~i~iwd~~~-----------------------~~~~~~~---------------~~-------~~~~~~v~~~~~~ 232 (344)
+.++++.+-+-.= |+....+ .. ......-..++|-
T Consensus 139 T~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWR 218 (928)
T PF04762_consen 139 TGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWR 218 (928)
T ss_pred eCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEEC
Confidence 9888887765100 0000000 00 0012234568999
Q ss_pred cCCCEEEEEeC------CCEEEEE----------------------cCCCCEEEEEeC---CCcEEEEeCCCCeEEeeec
Q psy15157 233 PCGDYMVVGTD------HFVLRLY----------------------SSDGRIYCSGSK---DGDIKIWDGVSSKCVATFS 281 (344)
Q Consensus 233 ~~~~~l~~~~~------~~~i~~~----------------------~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~ 281 (344)
.||.|+++.+- ...+++| .|.|+++|+... ...|.+|. ++|-....|.
T Consensus 219 GDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~ 297 (928)
T PF04762_consen 219 GDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFT 297 (928)
T ss_pred CCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEe
Confidence 99999998764 2567776 688898887764 34577777 3443333332
Q ss_pred c--cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 282 K--AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 282 ~--~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
. ......|..+.|++|+..|+..-.|. |.+|-..+-.
T Consensus 298 l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYH 336 (928)
T PF04762_consen 298 LRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYH 336 (928)
T ss_pred cCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCE
Confidence 2 23345799999999999999977655 9999887765
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.6e-06 Score=72.78 Aligned_cols=204 Identities=15% Similarity=0.168 Sum_probs=121.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccc-cC-CCC-C----------------------CcCCCCCCceEEEe
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKS-SM-ESS-E----------------------PQNDQQGHPVIRTL 175 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~-~~-~~~-~----------------------~~~~~~~~~~~~~~ 175 (344)
.|+.+.|+++..-|++|...|.|.||.+....... .. ... + ...-..+..+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 58899999998899999999999999886432221 00 000 0 00001223455556
Q ss_pred cCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeec------cccceEEEEEec-----CC---CEEEEE
Q psy15157 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ------ESTFVRCLSFHP-----CG---DYMVVG 241 (344)
Q Consensus 176 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~~-----~~---~~l~~~ 241 (344)
....++|++++.+ +=.+++.|..+|.+.|.|++....+....... ....++++.|.. ++ -.+++|
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 6678999999997 44499999999999999998876544322222 345678888873 22 478899
Q ss_pred eCCCEEEEE---------------------------------------------------cCCCCEEEEEeCCCcEEEEe
Q psy15157 242 TDHFVLRLY---------------------------------------------------SSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 242 ~~~~~i~~~---------------------------------------------------~~~~~~l~~~~~dg~i~iwd 270 (344)
+..|.+.+| ...-..++....+..|+++.
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~ 241 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK 241 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence 999999987 00112234445567799998
Q ss_pred CCCCeEEeeecccCCCccEEEEEEc-----cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTFT-----RNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~~-----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..+.+..+.....+ ....++.+- ..+..|++-..+|.|+++.+..-+.+..+.-.
T Consensus 242 ~~~~k~~~K~~~~~--~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~ 301 (395)
T PF08596_consen 242 PPKSKGAHKSFDDP--FLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLP 301 (395)
T ss_dssp TT---EEEEE-SS---EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-S
T ss_pred CCCCcccceeeccc--cccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCC
Confidence 88877666554221 123344452 35667888889999999999999998887764
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.1e-05 Score=63.32 Aligned_cols=189 Identities=11% Similarity=0.135 Sum_probs=124.6
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+.++-|+|+|+++.|.++-.+ |.|.-|.++... .....+.....-..+-+.++++++++
T Consensus 36 v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~--------------G~Lt~ln~~~~~g~~p~yvsvd~~g~ 101 (346)
T COG2706 36 VAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDD--------------GRLTFLNRQTLPGSPPCYVSVDEDGR 101 (346)
T ss_pred ccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCC--------------CeEEEeeccccCCCCCeEEEECCCCC
Confidence 4567788999999999988887655 678888775310 00111111122223337899999999
Q ss_pred EEEEEeC-CCcEEEEEcCC-Cccccceeeeccccc----------eEEEEEecCCCEEEEEeC-CCEEEEE---------
Q psy15157 193 ILASGSK-DKTVKMFDYSK-SSVRKAHKTIQESTF----------VRCLSFHPCGDYMVVGTD-HFVLRLY--------- 250 (344)
Q Consensus 193 ~l~s~~~-dg~i~iwd~~~-~~~~~~~~~~~~~~~----------v~~~~~~~~~~~l~~~~~-~~~i~~~--------- 250 (344)
+++++.. -|.|.++-+.. +..........|... +....+.|+++++++... .-.+.+|
T Consensus 102 ~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~ 181 (346)
T COG2706 102 FVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTP 181 (346)
T ss_pred EEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccc
Confidence 9888876 48899999865 544444344444444 778889999999988752 2233333
Q ss_pred -----------------cCCCCEEEEEe-CCCcEEEEeCCCC--e--EEeeec---c-cCCCccEEEEEEccCCCEEEEE
Q psy15157 251 -----------------SSDGRIYCSGS-KDGDIKIWDGVSS--K--CVATFS---K-AHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 -----------------~~~~~~l~~~~-~dg~i~iwd~~~~--~--~~~~~~---~-~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+|++++..+.+ -+++|-+|..... + .++.+. . .....+..+|..++||++|.++
T Consensus 182 ~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYas 261 (346)
T COG2706 182 ADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYAS 261 (346)
T ss_pred ccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEe
Confidence 78888876554 5788999987763 2 223222 1 1222457889999999999887
Q ss_pred eC-CCcEEEEEcCCC
Q psy15157 305 GK-DSLVKLWELSSA 318 (344)
Q Consensus 305 ~~-dg~i~vwd~~~~ 318 (344)
.. ...|.+|.+...
T Consensus 262 NRg~dsI~~f~V~~~ 276 (346)
T COG2706 262 NRGHDSIAVFSVDPD 276 (346)
T ss_pred cCCCCeEEEEEEcCC
Confidence 52 346888877653
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.4e-06 Score=68.64 Aligned_cols=162 Identities=10% Similarity=0.024 Sum_probs=109.8
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE-EecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-TLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
+.++++++|++++++.+....|..|.++. ....... ....-.+.-.+..|+.....+|++..|
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~----------------~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qd 224 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDD----------------ESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQD 224 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCC----------------ccceeeeeEecccCCCceeeeeccCcceEEEEecC
Confidence 78899999999999999999999999863 1222222 334445556788999999999999999
Q ss_pred CcEEEEEcCCCcccc---ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE
Q psy15157 201 KTVKMFDYSKSSVRK---AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCV 277 (344)
Q Consensus 201 g~i~iwd~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 277 (344)
|++.|||++...... ......|.+.++.+.|++.|.. . +|+..-.=+.+++.|+++++..
T Consensus 225 g~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~l----------------D-LLf~sEhfs~~hv~D~R~~~~~ 287 (344)
T KOG4532|consen 225 GTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLL----------------D-LLFISEHFSRVHVVDTRNYVNH 287 (344)
T ss_pred CcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcc----------------e-EEEEecCcceEEEEEcccCcee
Confidence 999999998754221 1122347888999999985431 1 2223333467899999998766
Q ss_pred eeeccc------CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 278 ATFSKA------HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 278 ~~~~~~------~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+.+... |....|..-.|+.++.-+.+.+++. +.=|++.+
T Consensus 288 q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~-~ae~ni~s 332 (344)
T KOG4532|consen 288 QVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQ-GAEYNILS 332 (344)
T ss_pred eEEecCccccccccccccccccccCCCcccccccchh-hheeeccc
Confidence 554321 1112366777777776666665442 34455543
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.4e-08 Score=84.45 Aligned_cols=147 Identities=17% Similarity=0.235 Sum_probs=111.2
Q ss_pred eEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEE
Q psy15157 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLR 248 (344)
Q Consensus 171 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~ 248 (344)
....+..|.+-|+.+.|+..|..|+||+.|..|.+||+..++....+. .+|...|-.-.|-| +...++.++.||.++
T Consensus 134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~-SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr 212 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFE-SGHCNNVFQAKFIPFSGDRTIVTSSRDGQVR 212 (559)
T ss_pred hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccc-cccccchhhhhccCCCCCcCceeccccCcee
Confidence 345678899999999999999999999999999999998876543333 34555566666777 356788888898888
Q ss_pred EE--------------------------cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeec--ccCCC--ccEEEEEEccC
Q psy15157 249 LY--------------------------SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFS--KAHDG--AEISSLTFTRN 297 (344)
Q Consensus 249 ~~--------------------------~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~--~~v~~i~~~~~ 297 (344)
+- .| ...-|.+++.|+.+.-+|++++.....+. ..+.. ....+++.+|.
T Consensus 213 ~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~ 292 (559)
T KOG1334|consen 213 VSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPR 292 (559)
T ss_pred eeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCC
Confidence 73 12 33457789999999999999875543332 12222 25788999995
Q ss_pred CC-EEEEEeCCCcEEEEEcCCC
Q psy15157 298 GK-YLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 298 ~~-~l~s~~~dg~i~vwd~~~~ 318 (344)
.. .+++|+.|..+++||.+.-
T Consensus 293 nt~~faVgG~dqf~RvYD~R~~ 314 (559)
T KOG1334|consen 293 NTNEFAVGGSDQFARVYDQRRI 314 (559)
T ss_pred CccccccCChhhhhhhhcccch
Confidence 54 7899999999999999763
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.2e-07 Score=78.42 Aligned_cols=101 Identities=15% Similarity=0.216 Sum_probs=74.9
Q ss_pred CCceEEEEECCCCCEEEEE--eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATG--SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.++|.++.|+++++-|+++ -.-.++.|||++ +.++. .--.++=+++-|+|.|++++.
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-------------------~~~v~--df~egpRN~~~fnp~g~ii~l 328 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-------------------GKPVF--DFPEGPRNTAFFNPHGNIILL 328 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCC-------------------CCEeE--eCCCCCccceEECCCCCEEEE
Confidence 7899999999999876654 345679999986 22333 334566788999999998888
Q ss_pred EeCC---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC
Q psy15157 197 GSKD---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 197 ~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 244 (344)
++.+ |.|-|||+.+.+.+..+. ...-+-+.|+|+|.+|++++..
T Consensus 329 AGFGNL~G~mEvwDv~n~K~i~~~~----a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 329 AGFGNLPGDMEVWDVPNRKLIAKFK----AANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred eecCCCCCceEEEeccchhhccccc----cCCceEEEEcCCCcEEEEEecc
Confidence 7764 889999998865443332 2234557999999999988753
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1e-05 Score=70.20 Aligned_cols=152 Identities=13% Similarity=0.159 Sum_probs=111.3
Q ss_pred ECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCC-cEE
Q psy15157 127 FSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDK-TVK 204 (344)
Q Consensus 127 ~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~ 204 (344)
|++ +|++++..|. |...|.+... +.. .--+|.+.|.-..+.-+++-++.|..|| .+-
T Consensus 327 fa~~~Gd~ia~VSR-GkaFi~~~~~------------------~~~--iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~ 385 (668)
T COG4946 327 FAVVNGDYIALVSR-GKAFIMRPWD------------------GYS--IQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLG 385 (668)
T ss_pred hccCCCcEEEEEec-CcEEEECCCC------------------Cee--EEcCCCCceEEEEEccCCcceEEeccCCceEE
Confidence 444 6888888875 6677776532 111 2236777798888888888899999999 899
Q ss_pred EEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC
Q psy15157 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284 (344)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 284 (344)
|+|.++++... ....-+.|.++..+++|++++ .+.....|.+.|+.+++... +....
T Consensus 386 iyd~~~~e~kr---~e~~lg~I~av~vs~dGK~~v-------------------vaNdr~el~vididngnv~~-idkS~ 442 (668)
T COG4946 386 IYDKDGGEVKR---IEKDLGNIEAVKVSPDGKKVV-------------------VANDRFELWVIDIDNGNVRL-IDKSE 442 (668)
T ss_pred EEecCCceEEE---eeCCccceEEEEEcCCCcEEE-------------------EEcCceEEEEEEecCCCeeE-ecccc
Confidence 99999876432 334556788999998776666 56666778888998887543 33233
Q ss_pred CCccEEEEEEccCCCEEEEEeCCC----cEEEEEcCCCeeEEE
Q psy15157 285 DGAEISSLTFTRNGKYLLSSGKDS----LVKLWELSSARCLIA 323 (344)
Q Consensus 285 ~~~~v~~i~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~ 323 (344)
.+-|+.++|+|++++++-+=-+| .|+++|+.+++....
T Consensus 443 -~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~v 484 (668)
T COG4946 443 -YGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDV 484 (668)
T ss_pred -cceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEe
Confidence 35699999999999999876555 589999988876543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.1e-05 Score=78.50 Aligned_cols=194 Identities=13% Similarity=0.167 Sum_probs=112.8
Q ss_pred EEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE-eCC
Q psy15157 123 RAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG-SKD 200 (344)
Q Consensus 123 ~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d 200 (344)
..+++++ +++++++-+.++.|++||................. ..+.. -...-..-..+++.++++.|+.+ ..+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~--~dG~~---~~a~f~~P~GIavd~~gn~LYVaDt~n 645 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGL--RDGSF---EDATFNRPQGLAYNAKKNLLYVADTEN 645 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCC--CCCch---hccccCCCcEEEEeCCCCEEEEEeCCC
Confidence 4578876 46677887788899999986422110000000000 00000 00122345788999988755444 456
Q ss_pred CcEEEEEcCCCccccceeeec---------------cccceEEEEEecC-CCEEEEEeCCCEEEEE--------------
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQ---------------ESTFVRCLSFHPC-GDYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~-------------- 250 (344)
+.|+++|..++... .+...+ .-.....++++|+ +..+++.+.++.|++|
T Consensus 646 ~~Ir~id~~~~~V~-tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G 724 (1057)
T PLN02919 646 HALREIDFVNETVR-TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDG 724 (1057)
T ss_pred ceEEEEecCCCEEE-EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCC
Confidence 78999998765432 111000 0113467899995 4444444444444443
Q ss_pred -----------------------cCCCC-EEEEEeCCCcEEEEeCCCCeEEeeec-----------cc-CC-------Cc
Q psy15157 251 -----------------------SSDGR-IYCSGSKDGDIKIWDGVSSKCVATFS-----------KA-HD-------GA 287 (344)
Q Consensus 251 -----------------------~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~-----------~~-~~-------~~ 287 (344)
+++|. ++++-+.++.|++||+.++....... .. .. ..
T Consensus 725 ~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~ 804 (1057)
T PLN02919 725 YERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQ 804 (1057)
T ss_pred ccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhcc
Confidence 45666 45555667899999988765321110 00 00 01
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
....++++++|+.+++.+.++.|++||..++....
T Consensus 805 ~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~t 839 (1057)
T PLN02919 805 HPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTT 839 (1057)
T ss_pred CCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEE
Confidence 24689999999988888999999999998876553
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-06 Score=81.04 Aligned_cols=151 Identities=17% Similarity=0.247 Sum_probs=108.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC-
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK- 199 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~- 199 (344)
.|+-++. +++++.+|...|+|.+-|.++ .+.+.++..|.+.|.++.. .|++|++|+.
T Consensus 179 ~v~imR~--Nnr~lf~G~t~G~V~LrD~~s------------------~~~iht~~aHs~siSDfDv--~GNlLitCG~S 236 (1118)
T KOG1275|consen 179 GVTIMRY--NNRNLFCGDTRGTVFLRDPNS------------------FETIHTFDAHSGSISDFDV--QGNLLITCGYS 236 (1118)
T ss_pred ceEEEEe--cCcEEEeecccceEEeecCCc------------------Cceeeeeeccccceeeeec--cCCeEEEeecc
Confidence 3555554 588999999999999999854 6778899999999988765 5789999886
Q ss_pred --------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 200 --------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 200 --------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
|.-|+|||++.-+.+..+...... .-+.|+|.- ...+++++..|...+-|.
T Consensus 237 ~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P---~flrf~Psl------------------~t~~~V~S~sGq~q~vd~ 295 (1118)
T KOG1275|consen 237 MRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP---QFLRFHPSL------------------TTRLAVTSQSGQFQFVDT 295 (1118)
T ss_pred cccccccccchhhhhhhhhhhccCCcccccCc---hhhhhcccc------------------cceEEEEecccceeeccc
Confidence 566899999987665555433222 345677742 234446777888888883
Q ss_pred CCC-eE-EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 272 VSS-KC-VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 272 ~~~-~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
.+. ++ .........+..+.+++++++|+.|+.|..+|.|.+|-
T Consensus 296 ~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 296 ATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 321 11 11111122334599999999999999999999999997
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.2e-05 Score=76.98 Aligned_cols=193 Identities=12% Similarity=0.187 Sum_probs=118.3
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCc----ccccc------------CCCCCCcCCCCCCce---------
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRM----LAKSS------------MESSEPQNDQQGHPV--------- 171 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~----~~~~~------------~~~~~~~~~~~~~~~--------- 171 (344)
.=...|.|++||||+..|+.+..++++.+.+.+=. ..... +.+.+.+.....++.
T Consensus 118 ~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~ 197 (928)
T PF04762_consen 118 SVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPT 197 (928)
T ss_pred EEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCC
Confidence 34678999999999999999999999988754210 00000 000111111111110
Q ss_pred -----EEEecCCcCCeEEEEEcCCCCEEEEEeC---C---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEE
Q psy15157 172 -----IRTLYDHIEEVTCLEFHPSAPILASGSK---D---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 172 -----~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
...+. +...-..++|-.||.+|++.+. . +.++||+-+ |....... .-.+--.+++|-|.|++|++
T Consensus 198 ~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE--~v~gLe~~l~WrPsG~lIA~ 273 (928)
T PF04762_consen 198 VPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSE--PVDGLEGALSWRPSGNLIAS 273 (928)
T ss_pred CCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccc--cCCCccCCccCCCCCCEEEE
Confidence 11222 4456678999999999988775 2 579999965 44322221 22233456899999999998
Q ss_pred EeC---CCEEEE--------------------------EcCCCCEEEEEeCCCcEEEEeCCCCeE--EeeecccCCCccE
Q psy15157 241 GTD---HFVLRL--------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKC--VATFSKAHDGAEI 289 (344)
Q Consensus 241 ~~~---~~~i~~--------------------------~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v 289 (344)
... ...|.+ |++++..|+....|. |.+|-..+... .+.+.-... ..+
T Consensus 274 ~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~-~~~ 351 (928)
T PF04762_consen 274 SQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSS-ESV 351 (928)
T ss_pred EEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCC-CCC
Confidence 753 222222 689999999877655 99999877642 333332222 235
Q ss_pred EEEEEccC-CCEEEEEeCCCcEEEEEc
Q psy15157 290 SSLTFTRN-GKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 290 ~~i~~~~~-~~~l~s~~~dg~i~vwd~ 315 (344)
..+.|+|. ...|...+.+|.+..+++
T Consensus 352 ~~~~Wdpe~p~~L~v~t~~g~~~~~~~ 378 (928)
T PF04762_consen 352 NFVKWDPEKPLRLHVLTSNGQYEIYDF 378 (928)
T ss_pred CceEECCCCCCEEEEEecCCcEEEEEE
Confidence 56999994 445777776677755443
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=5.9e-06 Score=75.96 Aligned_cols=143 Identities=15% Similarity=0.245 Sum_probs=96.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-----CCEEEEEeCCCcEE
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-----APILASGSKDKTVK 204 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~l~s~~~dg~i~ 204 (344)
+|.+++|||.||+|.|-.+-+.. .. +......++.+++++|+ .+.+++|+.-| +.
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~------------------~~-~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lv 141 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDD------------------EI-TQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LV 141 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCc------------------cc-eeEecCCcceeEEeccchhhhhhhheeecCcce-EE
Confidence 49999999999999999875321 11 11234568899999997 45899999988 77
Q ss_pred EEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC
Q psy15157 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH 284 (344)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 284 (344)
++.-+--............++|.++.| .|+++|-++.+| |+|||+.+++.+..+...+
T Consensus 142 L~er~wlgnk~~v~l~~~eG~I~~i~W---------------------~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~ 199 (846)
T KOG2066|consen 142 LSERNWLGNKDSVVLSEGEGPIHSIKW---------------------RGNLIAWANDDG-VKVYDTPTRQRLTNIPPPS 199 (846)
T ss_pred EehhhhhcCccceeeecCccceEEEEe---------------------cCcEEEEecCCC-cEEEeccccceeeccCCCC
Confidence 776433222233333445678899988 344555666665 8999999988887776443
Q ss_pred CC----ccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 285 DG----AEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 285 ~~----~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.. .....+.|.++.+ |+.| ...+|+|..++
T Consensus 200 ~~~R~e~fpphl~W~~~~~-LVIG-W~d~v~i~~I~ 233 (846)
T KOG2066|consen 200 QSVRPELFPPHLHWQDEDR-LVIG-WGDSVKICSIK 233 (846)
T ss_pred CCCCcccCCCceEecCCCe-EEEe-cCCeEEEEEEe
Confidence 21 2245778887654 3433 44568888887
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.2e-06 Score=72.55 Aligned_cols=80 Identities=19% Similarity=0.252 Sum_probs=66.7
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
++.+|...|+.++|||..+ ++..++.+..|+|.|+++ ...+..+..| ..+++++|.-+..
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet------------------~~~vssy~a~-~~~wSC~wDlde~ 248 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLET------------------SCVVSSYIAY-NQIWSCCWDLDER 248 (463)
T ss_pred cccccchhhhhhccCccccceeeeeccCceEEEEeccc------------------ceeeeheecc-CCceeeeeccCCc
Confidence 6788999999999999776 889999999999999975 2334455556 7899999988665
Q ss_pred -EEEEEeCCCcEEEEEcCCCc
Q psy15157 193 -ILASGSKDKTVKMFDYSKSS 212 (344)
Q Consensus 193 -~l~s~~~dg~i~iwd~~~~~ 212 (344)
++..|-.+|.|.|||++..+
T Consensus 249 h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 249 HVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred ceeEEeccCceEEEEEccCCC
Confidence 78899999999999998753
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.54 E-value=0.00024 Score=59.33 Aligned_cols=189 Identities=13% Similarity=0.110 Sum_probs=118.4
Q ss_pred EEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc-CCCCEEEEEeCCC
Q psy15157 124 AGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH-PSAPILASGSKDK 201 (344)
Q Consensus 124 ~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~~~dg 201 (344)
+..|.+ ++.++++--..+.|..|+..+. ....+.... ...+++. +++ .|+.+.. +
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~-------------------~~~~~~~~~--~~G~~~~~~~g-~l~v~~~-~ 60 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTG-------------------EVEVIDLPG--PNGMAFDRPDG-RLYVADS-G 60 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTT-------------------EEEEEESSS--EEEEEEECTTS-EEEEEET-T
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCC-------------------eEEEEecCC--CceEEEEccCC-EEEEEEc-C
Confidence 567887 7777777777899999998642 111121111 6777787 565 4444554 4
Q ss_pred cEEEEEcCCCccccceeee--c-cccceEEEEEecCCCEEEEEeCC--------CEEEE---------------------
Q psy15157 202 TVKMFDYSKSSVRKAHKTI--Q-ESTFVRCLSFHPCGDYMVVGTDH--------FVLRL--------------------- 249 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~~--------~~i~~--------------------- 249 (344)
.+.++|..+++........ . .....+.++++|+|++.++.... +.+..
T Consensus 61 ~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~pNGi~ 140 (246)
T PF08450_consen 61 GIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGKVTVVADGLGFPNGIA 140 (246)
T ss_dssp CEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTSEEEEEEEEESSEEEEE
T ss_pred ceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCCeEEEEecCcccccceE
Confidence 4566698887654444432 1 34568899999999966654432 23332
Q ss_pred EcCCCCEEE-EEeCCCcEEEEeCCCCeE----Eeeecc-cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 250 YSSDGRIYC-SGSKDGDIKIWDGVSSKC----VATFSK-AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 250 ~~~~~~~l~-~~~~dg~i~iwd~~~~~~----~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
|+++++.|+ +-+..+.|..|++..... ...+.. ....+..-.++++.+|++.++.-..+.|.++|.. |+.+..
T Consensus 141 ~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~ 219 (246)
T PF08450_consen 141 FSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLRE 219 (246)
T ss_dssp EETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEE
T ss_pred ECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEE
Confidence 378888664 667778899998853211 112211 1111247889999999988888889999999987 999888
Q ss_pred eecCCCcCceeeeee
Q psy15157 324 YTGAGSMGQQFELTL 338 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~ 338 (344)
+.-... ......|
T Consensus 220 i~~p~~--~~t~~~f 232 (246)
T PF08450_consen 220 IELPVP--RPTNCAF 232 (246)
T ss_dssp EE-SSS--SEEEEEE
T ss_pred EcCCCC--CEEEEEE
Confidence 887633 3444444
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.5e-07 Score=76.69 Aligned_cols=146 Identities=20% Similarity=0.225 Sum_probs=98.9
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPILASG 197 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~ 197 (344)
++.|.++.|...++++..|...|.|...|++... ....+. .....|.+.|+++..-. ++++|++.
T Consensus 252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rn------------qG~~~~--a~rlyh~Ssvtslq~Lq~s~q~LmaS 317 (425)
T KOG2695|consen 252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRN------------QGNGWC--AQRLYHDSSVTSLQILQFSQQKLMAS 317 (425)
T ss_pred chhHHHHHhcccCCeeEecccCCcEEEEEeeecc------------cCCCcc--eEEEEcCcchhhhhhhccccceEeec
Confidence 4568888898889999999999999999997431 111122 22335899999998877 77899999
Q ss_pred eCCCcEEEEEcCCCcccc-ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE
Q psy15157 198 SKDKTVKMFDYSKSSVRK-AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC 276 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 276 (344)
+.+|+|++||++.-+... .....+| |+..+..|-+ .++....+++++.|...|||.++++..
T Consensus 318 ~M~gkikLyD~R~~K~~~~V~qYeGH---vN~~a~l~~~--------------v~~eeg~I~s~GdDcytRiWsl~~ghL 380 (425)
T KOG2695|consen 318 DMTGKIKLYDLRATKCKKSVMQYEGH---VNLSAYLPAH--------------VKEEEGSIFSVGDDCYTRIWSLDSGHL 380 (425)
T ss_pred cCcCceeEeeehhhhcccceeeeecc---cccccccccc--------------cccccceEEEccCeeEEEEEecccCce
Confidence 999999999998765532 2223333 2222222200 123455666789999999999999998
Q ss_pred EeeecccCCC--ccEEEEEEc
Q psy15157 277 VATFSKAHDG--AEISSLTFT 295 (344)
Q Consensus 277 ~~~~~~~~~~--~~v~~i~~~ 295 (344)
+.++...... ..+.+++|.
T Consensus 381 l~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 381 LCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred eeccCCCCccccccccceehh
Confidence 8887633211 124555554
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=6e-07 Score=81.48 Aligned_cols=160 Identities=21% Similarity=0.319 Sum_probs=109.5
Q ss_pred ceEEEEECCCCC---EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEE
Q psy15157 121 PCRAGAFSIDGQ---LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILAS 196 (344)
Q Consensus 121 ~v~~~~~s~~~~---~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 196 (344)
.|-...|++... ++++.+ ...-.+|++.. .........+.+|...|+++-|+|+.. .+++
T Consensus 69 ~vad~qws~h~a~~~wiVsts-~qkaiiwnlA~---------------ss~~aIef~lhghsraitd~n~~~q~pdVlat 132 (1081)
T KOG0309|consen 69 QVADVQWSPHPAKPYWIVSTS-NQKAIIWNLAK---------------SSSNAIEFVLHGHSRAITDINFNPQHPDVLAT 132 (1081)
T ss_pred hhcceecccCCCCceeEEecC-cchhhhhhhhc---------------CCccceEEEEecCccceeccccCCCCCcceee
Confidence 466778887432 444444 45566898852 133455667889999999999999776 8999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK- 275 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~- 275 (344)
++.|-.+..||++..... ......-......++|+-. ++..+ +.+....|++||.+.|.
T Consensus 133 csvdt~vh~wd~rSp~~p-~ys~~~w~s~asqVkwnyk------------------~p~vl-asshg~~i~vwd~r~gs~ 192 (1081)
T KOG0309|consen 133 CSVDTYVHAWDMRSPHRP-FYSTSSWRSAASQVKWNYK------------------DPNVL-ASSHGNDIFVWDLRKGST 192 (1081)
T ss_pred ccccccceeeeccCCCcc-eeeeecccccCceeeeccc------------------Ccchh-hhccCCceEEEeccCCCc
Confidence 999999999999986432 2222222334556777653 23333 34556679999999875
Q ss_pred EEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCC
Q psy15157 276 CVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 276 ~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
++..++ .|. ..|+.+.|+. .-..+.+++.||+|+.||....
T Consensus 193 pl~s~K-~~v-s~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 193 PLCSLK-GHV-SSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred ceEEec-ccc-eeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 444554 444 4688888875 2345889999999999998654
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.4e-05 Score=74.19 Aligned_cols=181 Identities=15% Similarity=0.226 Sum_probs=117.7
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC-eEEEEEcCCCCEEEEEeCCC---
Q psy15157 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE-VTCLEFHPSAPILASGSKDK--- 201 (344)
Q Consensus 126 ~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~dg--- 201 (344)
+|++.+..++.|+.+|.|.+.+-. ...+..++.+... |..+....+..+|++.+.|+
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s-------------------~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~n 90 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS-------------------FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGN 90 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc-------------------ceeeehheecchhhhhHhhcccCceEEEEEeecCCCC
Confidence 456788899999999999888753 3444667777766 44444444446888877765
Q ss_pred --cEEEEEcCCCcccc------ceeeec-----cccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 202 --TVKMFDYSKSSVRK------AHKTIQ-----ESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 202 --~i~iwd~~~~~~~~------~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
.++|||++...... .+.... ...++.+++.+.+-..+++|-.+|.|..+
T Consensus 91 p~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~ 170 (933)
T KOG2114|consen 91 PVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRG 170 (933)
T ss_pred ceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccC
Confidence 49999987642111 112222 35678899999999999999999999987
Q ss_pred ---------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 251 ---------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ---------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
..++..++-...-..|.+|.+....+..... .++|..++|..+++....+++++ +..+.+||......-
T Consensus 171 ~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~l-d~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~c 248 (933)
T KOG2114|consen 171 KEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVL-DNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPC 248 (933)
T ss_pred CCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeee-ccCCccceeeecCCCCccEEEec-CceEEEEcCCCccee
Confidence 1233331222233468888877433222222 34556799999987555466555 456888888765555
Q ss_pred EEee-cC
Q psy15157 322 IAYT-GA 327 (344)
Q Consensus 322 ~~~~-~~ 327 (344)
.+|. |+
T Consensus 249 faf~~g~ 255 (933)
T KOG2114|consen 249 FAFEVGE 255 (933)
T ss_pred eeecCCC
Confidence 5665 44
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.7e-05 Score=72.73 Aligned_cols=184 Identities=13% Similarity=0.113 Sum_probs=128.3
Q ss_pred eeEEecCCCceEEEEECCCC------------CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc
Q psy15157 112 TAYVTSHKSPCRAGAFSIDG------------QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI 179 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~------------~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 179 (344)
.+.+.-|+..|+.+.|.|-. -++|++...|.|.+||+.. ...+..+..|.
T Consensus 48 iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~------------------~s~~~~l~~~~ 109 (1062)
T KOG1912|consen 48 IQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVL------------------ASVINWLSHSN 109 (1062)
T ss_pred hhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehh------------------hhhhhhhcCCC
Confidence 34567899999999997621 2678888899999999964 23345667788
Q ss_pred CCeEEEEEcC---CC-CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE----
Q psy15157 180 EEVTCLEFHP---SA-PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY---- 250 (344)
Q Consensus 180 ~~v~~~~~~~---~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~---- 250 (344)
.++..++|-+ +. ..|++-....+|.+|+..+|+....+. .......|+.++| +.+.+.+-+..|.+.+.
T Consensus 110 ~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~--ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~ 187 (1062)
T KOG1912|consen 110 DSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYD--YSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLG 187 (1062)
T ss_pred cchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccc--cCCcceeeeeeCCCCcceEEEEccCceEEEEeccC
Confidence 8888999876 33 366666667899999999987654443 3445577788888 56666666666666553
Q ss_pred ---------------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEee
Q psy15157 251 ---------------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVAT 279 (344)
Q Consensus 251 ---------------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 279 (344)
+|.-+-++-......+.++|++-..++..
T Consensus 188 ~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~v 267 (1062)
T KOG1912|consen 188 LSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAV 267 (1062)
T ss_pred CCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEE
Confidence 22223333344566788999888877777
Q ss_pred ecccCCCccEEEEEEccCC--CEEEEEeCCCcEEEEEcCC
Q psy15157 280 FSKAHDGAEISSLTFTRNG--KYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 280 ~~~~~~~~~v~~i~~~~~~--~~l~s~~~dg~i~vwd~~~ 317 (344)
+.....+ +.-+.|-|++ ..|++.-.||.+.+|--+.
T Consensus 268 vpier~~--akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 268 VPIERGG--AKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred EEeccCC--cceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 6544433 4556677655 4689999999999997655
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.9e-05 Score=69.31 Aligned_cols=186 Identities=11% Similarity=0.113 Sum_probs=114.9
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
-.+.+.||++.|.-+.|+.+.+.|-|...+|.|.||-+-++. +-...+-....+.|.+++|+.+
T Consensus 63 mNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgs----------------W~EEMiNnRnKSvV~SmsWn~d 126 (1189)
T KOG2041|consen 63 MNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGS----------------WCEEMINNRNKSVVVSMSWNLD 126 (1189)
T ss_pred hhhhhccCcceEEEEEeccccccccccCCCceEEEEeeeccc----------------HHHHHhhCcCccEEEEEEEcCC
Confidence 345689999999999999999999999999999999874321 1111112234556778888888
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcccc----------------------------------------c------ee----ee
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRK----------------------------------------A------HK----TI 220 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~----------------------------------------~------~~----~~ 220 (344)
|..++..-.||.|.+=.+...+... . .. ..
T Consensus 127 G~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s 206 (1189)
T KOG2041|consen 127 GTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFS 206 (1189)
T ss_pred CcEEEEEEccCCEEEEeeccceecchhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeec
Confidence 8777666666666544432221000 0 00 00
Q ss_pred ccccceEEEEEe--------cCCCEEEEEeCCCEEEE----------------------EcCCCCEEEEEeCCC------
Q psy15157 221 QESTFVRCLSFH--------PCGDYMVVGTDHFVLRL----------------------YSSDGRIYCSGSKDG------ 264 (344)
Q Consensus 221 ~~~~~v~~~~~~--------~~~~~l~~~~~~~~i~~----------------------~~~~~~~l~~~~~dg------ 264 (344)
..+..+..+.|. |+...++++..+|.+.+ |+++|..++.++.+.
T Consensus 207 ~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~ 286 (1189)
T KOG2041|consen 207 NFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPT 286 (1189)
T ss_pred CCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCCcEEEEccCcccccCcc
Confidence 001123334443 36667888887777765 799999999988663
Q ss_pred ---cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 265 ---DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 265 ---~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.|++|. .-|+.+.++... +..|++++|--.|-.++.+- |+.|++=+++
T Consensus 287 d~n~v~Fys-p~G~i~gtlkvp--g~~It~lsWEg~gLriA~Av-dsfiyfanIR 337 (1189)
T KOG2041|consen 287 DSNKVHFYS-PYGHIVGTLKVP--GSCITGLSWEGTGLRIAIAV-DSFIYFANIR 337 (1189)
T ss_pred ccceEEEec-cchhheEEEecC--CceeeeeEEcCCceEEEEEe-cceEEEEeec
Confidence 455554 345556666532 34699999976665554443 5566554443
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.5e-05 Score=63.93 Aligned_cols=181 Identities=16% Similarity=0.195 Sum_probs=114.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeC-----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSV-----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.|.|| -.||+||++|++.-. .|.|-|||.. .....+..+..|.-.--.+.+.
T Consensus 51 HFyGH------g~fs~dG~~LytTEnd~~~g~G~IgVyd~~-----------------~~~~ri~E~~s~GIGPHel~l~ 107 (305)
T PF07433_consen 51 HFYGH------GVFSPDGRLLYTTENDYETGRGVIGVYDAA-----------------RGYRRIGEFPSHGIGPHELLLM 107 (305)
T ss_pred EEecC------EEEcCCCCEEEEeccccCCCcEEEEEEECc-----------------CCcEEEeEecCCCcChhhEEEc
Confidence 45677 379999999998644 4789999996 2345566666666556677888
Q ss_pred CCCCEEEEEe------------------CCCcEEEEEcCCCccccceee--eccccceEEEEEecCCCEEEEEeCCCEEE
Q psy15157 189 PSAPILASGS------------------KDKTVKMFDYSKSSVRKAHKT--IQESTFVRCLSFHPCGDYMVVGTDHFVLR 248 (344)
Q Consensus 189 ~~~~~l~s~~------------------~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~~i~ 248 (344)
|+++.|+.+. .+-++...|..+++....... ..+...|..++++++|..++.+-..+.-.
T Consensus 108 pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~ 187 (305)
T PF07433_consen 108 PDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPG 187 (305)
T ss_pred CCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCC
Confidence 8887666542 234455566667766555444 33556788889988877666554332110
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCeeEEEeec
Q psy15157 249 LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 249 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~ 326 (344)
..-.+++.-..++.+...+..... .. .-. ..+-+|++++++.++++.+ .-+.+.+||..+++.+....-
T Consensus 188 ---~~~PLva~~~~g~~~~~~~~p~~~----~~-~l~-~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l 257 (305)
T PF07433_consen 188 ---DAPPLVALHRRGGALRLLPAPEEQ----WR-RLN-GYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL 257 (305)
T ss_pred ---ccCCeEEEEcCCCcceeccCChHH----HH-hhC-CceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc
Confidence 011233333333334444432221 11 111 3689999999998876555 677899999999998877654
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=0.00015 Score=65.34 Aligned_cols=170 Identities=11% Similarity=0.025 Sum_probs=94.1
Q ss_pred cCCCceEEEEECCCCCEEEE-EeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 117 SHKSPCRAGAFSIDGQLCAT-GSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~s-g~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
...+.+....|+|||+.++. .+.++ .|.++|+.++ . ...+..+........|+|||+.
T Consensus 230 ~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g------------------~-~~~LT~~~~~d~~p~~SPDG~~ 290 (419)
T PRK04043 230 SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK------------------T-LTQITNYPGIDVNGNFVEDDKR 290 (419)
T ss_pred cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC------------------c-EEEcccCCCccCccEECCCCCE
Confidence 34455667889999986654 44343 4666676431 1 2223333332335579999986
Q ss_pred EEEEe-CCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy15157 194 LASGS-KDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 194 l~s~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd 270 (344)
|+-.+ ..| .|.+.|+.+++..+... .+. . ...|+|+|++++....... .. .+.....|.+.|
T Consensus 291 I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~-~g~--~--~~~~SPDG~~Ia~~~~~~~-------~~---~~~~~~~I~v~d 355 (419)
T PRK04043 291 IVFVSDRLGYPNIFMKKLNSGSVEQVVF-HGK--N--NSSVSTYKNYIVYSSRETN-------NE---FGKNTFNLYLIS 355 (419)
T ss_pred EEEEECCCCCceEEEEECCCCCeEeCcc-CCC--c--CceECCCCCEEEEEEcCCC-------cc---cCCCCcEEEEEE
Confidence 65444 333 57777887765432221 111 1 2478998888876543210 00 000114688889
Q ss_pred CCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-C--cEEEEEcCCCeeEEEee
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-S--LVKLWELSSARCLIAYT 325 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-g--~i~vwd~~~~~~~~~~~ 325 (344)
+.++... .+.... ......|+|||+.|+..+.+ + .+.+.++.. +....+.
T Consensus 356 ~~~g~~~-~LT~~~---~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g-~~~~~l~ 408 (419)
T PRK04043 356 TNSDYIR-RLTANG---VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY-NKSFLFP 408 (419)
T ss_pred CCCCCeE-ECCCCC---CcCCeEECCCCCEEEEEEccCCcEEEEEEecCC-CeeEEee
Confidence 8887653 333221 23357899999987665433 2 366777744 3333443
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.7e-07 Score=79.09 Aligned_cols=137 Identities=18% Similarity=0.231 Sum_probs=97.6
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-----cccceeeeccccceEEEEEecCCCEEEEEeCC
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS-----VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 244 (344)
-.+..+.+|+..|..++--.+.+-+++++.|.+|++|.++... ....+....|..+|.++.|-.+.++++
T Consensus 726 irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~----- 800 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIA----- 800 (1034)
T ss_pred eeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceee-----
Confidence 3456788999999999888888899999999999999986531 123344556888899888877665554
Q ss_pred CEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc--CCCEEEEE-eCCCcEEEEEcCCCeeE
Q psy15157 245 FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR--NGKYLLSS-GKDSLVKLWELSSARCL 321 (344)
Q Consensus 245 ~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~s~-~~dg~i~vwd~~~~~~~ 321 (344)
+.||.|++||.--++.+.........+.+..+..-+ +...++.| +...+|+++|.++++..
T Consensus 801 ----------------ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~ 864 (1034)
T KOG4190|consen 801 ----------------SCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWT 864 (1034)
T ss_pred ----------------eccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccce
Confidence 458889999988887765443222222344444444 45555555 78899999999999877
Q ss_pred EEeecC
Q psy15157 322 IAYTGA 327 (344)
Q Consensus 322 ~~~~~~ 327 (344)
..++-.
T Consensus 865 ~E~kVc 870 (1034)
T KOG4190|consen 865 CELKVC 870 (1034)
T ss_pred eeEEec
Confidence 666543
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.6e-06 Score=77.21 Aligned_cols=75 Identities=25% Similarity=0.258 Sum_probs=62.8
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.....|.|++++|+.+.|+.|..||+|.+||..+. +..+....-..+.++|||+|.++++
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~--------------------~t~~~ka~~~P~~iaWHp~gai~~V 316 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRG--------------------VTLLAKAEFIPTLIAWHPDGAIFVV 316 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCC--------------------eeeeeeecccceEEEEcCCCcEEEE
Confidence 57789999999999999999999999999998642 1222233445789999999999999
Q ss_pred EeCCCcEEEEEcCCC
Q psy15157 197 GSKDKTVKMFDYSKS 211 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~ 211 (344)
|+..|.+.+||+.-.
T Consensus 317 ~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 317 GSEQGELQCFDMALS 331 (545)
T ss_pred EcCCceEEEEEeecC
Confidence 999999999998654
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00014 Score=65.01 Aligned_cols=134 Identities=10% Similarity=0.048 Sum_probs=86.2
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccc--c---ceEEEEEec--CCCEEEEEeCCCEEEEEc-------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQES--T---FVRCLSFHP--CGDYMVVGTDHFVLRLYS------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~---~v~~~~~~~--~~~~l~~~~~~~~i~~~~------------- 251 (344)
..++.+..+|.+..+|..+++........... . ....+.-+| .+..+++++.++.+..++
T Consensus 191 ~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~ 270 (377)
T TIGR03300 191 GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS 270 (377)
T ss_pred CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC
Confidence 35677888899999999888654332211000 0 000000011 245666666666666552
Q ss_pred ------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 252 ------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 252 ------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
..+..++.++.+|.+..+|..+++.+........ ....+... .+..|++++.+|.|++||..+|+.+.+++
T Consensus 271 ~~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~-~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~ 347 (377)
T TIGR03300 271 SYQGPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKY-RQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLK 347 (377)
T ss_pred CccCceEeCCEEEEECCCCeEEEEECCCCcEEEccccccC-CccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 2356777888999999999999987765532111 11223233 46789999999999999999999999887
Q ss_pred cCC
Q psy15157 326 GAG 328 (344)
Q Consensus 326 ~~~ 328 (344)
.++
T Consensus 348 ~~~ 350 (377)
T TIGR03300 348 TDG 350 (377)
T ss_pred cCC
Confidence 554
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.6e-05 Score=72.90 Aligned_cols=100 Identities=17% Similarity=0.318 Sum_probs=74.4
Q ss_pred EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE---------EEeCCCcE
Q psy15157 133 LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA---------SGSKDKTV 203 (344)
Q Consensus 133 ~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~---------s~~~dg~i 203 (344)
++|.|...|+|.++|+.+ +.....+.-|.+.|.++.|-....++- +|+.-+.+
T Consensus 439 LvAvGT~sGTV~vvdvst------------------~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l 500 (1062)
T KOG1912|consen 439 LVAVGTNSGTVDVVDVST------------------NAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDL 500 (1062)
T ss_pred eEEeecCCceEEEEEecc------------------hhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeE
Confidence 788999999999999954 344556778999999999987655432 22333567
Q ss_pred EEEEcCCCcccccee-eeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 204 KMFDYSKSSVRKAHK-TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 204 ~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
.+-|+++|..+.... ......+|+.+..+..|+|+++.-.+.-+.+|
T Consensus 501 ~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiw 548 (1062)
T KOG1912|consen 501 VVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIW 548 (1062)
T ss_pred EEEEcccccccccccCCCCCcCcceeeeecccCceEEEEecccchHHH
Confidence 889999986433221 22356789999999999999999888777777
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.33 E-value=8.1e-05 Score=66.68 Aligned_cols=115 Identities=14% Similarity=0.255 Sum_probs=75.1
Q ss_pred EEEEEcCC-CCEEEEE----eCCCc----EEEEEcCCCccccc-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC
Q psy15157 183 TCLEFHPS-APILASG----SKDKT----VKMFDYSKSSVRKA-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS 252 (344)
Q Consensus 183 ~~~~~~~~-~~~l~s~----~~dg~----i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~ 252 (344)
.++.|+.. ...+.|. +.+|. -++|++..++.... .........+.|++++|+.+
T Consensus 209 l~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~---------------- 272 (545)
T PF11768_consen 209 LDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSED---------------- 272 (545)
T ss_pred EEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccc----------------
Confidence 56677653 3344432 33443 34566655443221 12234556677888877554
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
.++.|+.||.|.+||...+..... . .. -.++.++|+|+|.++++|++.|.+.+||+.-...
T Consensus 273 ---kLvlGC~DgSiiLyD~~~~~t~~~-k-a~--~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi 333 (545)
T PF11768_consen 273 ---KLVLGCEDGSIILYDTTRGVTLLA-K-AE--FIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPI 333 (545)
T ss_pred ---eEEEEecCCeEEEEEcCCCeeeee-e-ec--ccceEEEEcCCCcEEEEEcCCceEEEEEeecCcc
Confidence 455799999999999877643322 1 21 3478999999999999999999999999975543
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.00026 Score=62.19 Aligned_cols=175 Identities=19% Similarity=0.228 Sum_probs=113.1
Q ss_pred CceEEEEECCCCC--EEEE-----EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 120 SPCRAGAFSIDGQ--LCAT-----GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 120 ~~v~~~~~s~~~~--~l~s-----g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..|....|+|.++ -||. .+.++.++||.+.. ...+.+-.-....=..+.|++.|+
T Consensus 174 ~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~------------------~s~l~tk~lfk~~~~qLkW~~~g~ 235 (561)
T COG5354 174 VGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPK------------------NSVLVTKNLFKVSGVQLKWQVLGK 235 (561)
T ss_pred cceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccC------------------CCeeeeeeeEeecccEEEEecCCc
Confidence 5677788888532 3443 45677888888742 122222222222334678888888
Q ss_pred EEEEEe-----------CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-----------CCCEEEE-
Q psy15157 193 ILASGS-----------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-----------DHFVLRL- 249 (344)
Q Consensus 193 ~l~s~~-----------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~~i~~- 249 (344)
+|+.-- ....++|+++....+. ... ...++|..++|.|.++.+++.+ -.+.++.
T Consensus 236 ~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~-V~~--~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~ 312 (561)
T COG5354 236 YLLVLVMTHTKSNKSYFGESNLYLLRITERSIP-VEK--DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRFY 312 (561)
T ss_pred eEEEEEEEeeecccceeccceEEEEeecccccc-eec--cccccceeeeecccCCceeEEecccccceeecccccceEEe
Confidence 544211 1255788888754322 111 3467899999999998887765 1333443
Q ss_pred ----------EcCCCCEEEEEeCC---CcEEEEeCCCCeEEe-eecccCCCccEEEEEEccCCCEEEEEe------CCCc
Q psy15157 250 ----------YSSDGRIYCSGSKD---GDIKIWDGVSSKCVA-TFSKAHDGAEISSLTFTRNGKYLLSSG------KDSL 309 (344)
Q Consensus 250 ----------~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~s~~------~dg~ 309 (344)
|+|.+++++.++.| |.|-+||......+. .+.. . ...-+.|+||++++.+.. .|..
T Consensus 313 ~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~-~---n~s~~~wspd~qF~~~~~ts~k~~~Dn~ 388 (561)
T COG5354 313 FPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG-L---NTSYCDWSPDGQFYDTDTTSEKLRVDNS 388 (561)
T ss_pred cCCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec-C---CceEeeccCCceEEEecCCCcccccCcc
Confidence 38899999998776 679999987765544 5542 2 245678999999988763 4788
Q ss_pred EEEEEcCCCe
Q psy15157 310 VKLWELSSAR 319 (344)
Q Consensus 310 i~vwd~~~~~ 319 (344)
|.|||+....
T Consensus 389 i~l~~v~g~~ 398 (561)
T COG5354 389 IKLWDVYGAK 398 (561)
T ss_pred eEEEEecCch
Confidence 9999995443
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.4e-07 Score=81.14 Aligned_cols=182 Identities=15% Similarity=0.234 Sum_probs=118.9
Q ss_pred CCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEEE
Q psy15157 119 KSPCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPILA 195 (344)
Q Consensus 119 ~~~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~ 195 (344)
...+.|+++.-+ ..+++.|..+|.|-+-.+.... ........+|....++++|++ |.++||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~h----------------dSs~E~tp~~ar~Ct~lAwneLDtn~LA 119 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPH----------------DSSAEVTPGYARPCTSLAWNELDTNHLA 119 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcc----------------cccceecccccccccccccccccHHHHH
Confidence 446778877653 3588999999999998886321 112345567888999999998 445777
Q ss_pred EEe----CCCcEEEEEcCCC--ccccceeeec-cccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 196 SGS----KDKTVKMFDYSKS--SVRKAHKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 196 s~~----~dg~i~iwd~~~~--~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
+|- .|-.+.|||+.+. .......+.. ......+++|..+.+.+.+|.....+.++
T Consensus 120 agldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vq 199 (783)
T KOG1008|consen 120 AGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQ 199 (783)
T ss_pred hhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcc
Confidence 663 3677999999875 1111111111 23345688899889999999888777775
Q ss_pred ----cC-CCCEEEEEeCCCcEEEEe-CCCC-eEEeeecccCC--CccEEEEEEccCCCE-EEEE-eCCCcEEEEEcCC
Q psy15157 251 ----SS-DGRIYCSGSKDGDIKIWD-GVSS-KCVATFSKAHD--GAEISSLTFTRNGKY-LLSS-GKDSLVKLWELSS 317 (344)
Q Consensus 251 ----~~-~~~~l~~~~~dg~i~iwd-~~~~-~~~~~~~~~~~--~~~v~~i~~~~~~~~-l~s~-~~dg~i~vwd~~~ 317 (344)
+| .+.++++ ..||.|-+|| .+.- .++..+..... ...+..++|.|...- +++. -+.++|+++|+..
T Consensus 200 G~tVdp~~~nY~cs-~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 200 GITVDPFSPNYFCS-NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred cceecCCCCCceec-cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 55 6677755 4599999999 3332 23333321111 124899999995432 3443 4567899999863
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.0001 Score=67.19 Aligned_cols=115 Identities=13% Similarity=0.091 Sum_probs=84.0
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
...|.--+++..+++++.|+.-|.+++|+...+.+. .....+-.+.+..+..+++..++|.|+
T Consensus 33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~-----------------~~~~~~~~~~~~~~~vs~~e~lvAagt 95 (726)
T KOG3621|consen 33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMR-----------------KLKNEGATGITCVRSVSSVEYLVAAGT 95 (726)
T ss_pred cceEEEEEeecCCceEEEecccceEEEEecCchhhh-----------------cccccCccceEEEEEecchhHhhhhhc
Confidence 344544556677999999999999999998643221 122223455667778899998999999
Q ss_pred CCCcEEEEEcCCCcccccee----eeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 199 KDKTVKMFDYSKSSVRKAHK----TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
..|.|.++-+.......... ...|...|+|++|++++..+++|...|.|..-
T Consensus 96 ~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~ 151 (726)
T KOG3621|consen 96 ASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLT 151 (726)
T ss_pred CCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEE
Confidence 99999999887743221111 11257789999999999999999999988763
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00031 Score=58.26 Aligned_cols=168 Identities=17% Similarity=0.094 Sum_probs=99.7
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
++..+++++.++.|..||..++.... .... .+.+.... ...+..++.++.++.++.+|..
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W------------------~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~ 94 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLW------------------RFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAK 94 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEE------------------EEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE------------------Eeec-ccccccee-eecccccccccceeeeEecccC
Confidence 46677777899999999987653322 1111 11110001 2234456666788899999999
Q ss_pred CCccccce-eeeccc-cceEEEEEecCCCEEEEEeCCCEEEEEc---------------C-----------------CCC
Q psy15157 210 KSSVRKAH-KTIQES-TFVRCLSFHPCGDYMVVGTDHFVLRLYS---------------S-----------------DGR 255 (344)
Q Consensus 210 ~~~~~~~~-~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~i~~~~---------------~-----------------~~~ 255 (344)
+++..... ...... ...........+..++++..++.+..++ + .+.
T Consensus 95 tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (238)
T PF13360_consen 95 TGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG 174 (238)
T ss_dssp TSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT
T ss_pred CcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC
Confidence 98876553 211111 1112222333477777777666666541 0 122
Q ss_pred EEEEEeCCCc-EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 256 IYCSGSKDGD-IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 256 ~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
.++.++.++. +.+ |..+++.+.... .. .+..+ ...++..|+.++.++.|..||+++|+.+-+
T Consensus 175 ~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~--~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 175 RVYVSSGDGRVVAV-DLATGEKLWSKP--IS--GIYSL-PSVDGGTLYVTSSDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp EEEEECCTSSEEEE-ETTTTEEEEEEC--SS---ECEC-EECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred EEEEEcCCCeEEEE-ECCCCCEEEEec--CC--CccCC-ceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence 5666677775 555 999998664222 11 23331 345778888888999999999999998754
|
... |
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.001 Score=57.78 Aligned_cols=156 Identities=11% Similarity=0.084 Sum_probs=89.5
Q ss_pred CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC----------CCcEEEEEcCC
Q psy15157 141 ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK----------DKTVKMFDYSK 210 (344)
Q Consensus 141 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~ 210 (344)
++|.+.|..+ .+.+.++..-..+- .+ ++|+++.|+.+.. +..|.+||..+
T Consensus 27 ~~v~ViD~~~------------------~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t 86 (352)
T TIGR02658 27 TQVYTIDGEA------------------GRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQT 86 (352)
T ss_pred ceEEEEECCC------------------CEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECcc
Confidence 7899999864 33344443222222 24 8999997665554 78999999999
Q ss_pred Cccccceeeecc-----ccceEEEEEecCCCEEEEEe-C-CCEEEEEc------------CCCCEEEEE--------eCC
Q psy15157 211 SSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGT-D-HFVLRLYS------------SDGRIYCSG--------SKD 263 (344)
Q Consensus 211 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~-~-~~~i~~~~------------~~~~~l~~~--------~~d 263 (344)
.+....+..... ......++++|+|+++++.. . +..+.+.+ |++..++.. +.|
T Consensus 87 ~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~D 166 (352)
T TIGR02658 87 HLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRD 166 (352)
T ss_pred CcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeec
Confidence 876655543222 22344789999999999876 3 56666662 444444444 334
Q ss_pred CcEEEEeCCC-Ce-EEeeecccCC-CccE-EEEEEcc-CCCEEEEEeCCCcEEEEEcCC
Q psy15157 264 GDIKIWDGVS-SK-CVATFSKAHD-GAEI-SSLTFTR-NGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 264 g~i~iwd~~~-~~-~~~~~~~~~~-~~~v-~~i~~~~-~~~~l~s~~~dg~i~vwd~~~ 317 (344)
|......+.. ++ ......-.+. ..++ ..-.|.+ +|++++...+ |+|++.|+..
T Consensus 167 g~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~ 224 (352)
T TIGR02658 167 GSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSS 224 (352)
T ss_pred CceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCC
Confidence 4433322221 11 1111110000 0000 0113455 8888888877 9999999643
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.0015 Score=54.54 Aligned_cols=159 Identities=19% Similarity=0.260 Sum_probs=100.0
Q ss_pred eEEEEEC-CCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe--cC-CcCCeEEEEEcCCCCEEEEE
Q psy15157 122 CRAGAFS-IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL--YD-HIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 122 v~~~~~s-~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-h~~~v~~~~~~~~~~~l~s~ 197 (344)
...+++. +++.++++ ..++ +.++|..++. ...+... .. .....+++++.++|++.++.
T Consensus 42 ~~G~~~~~~~g~l~v~-~~~~-~~~~d~~~g~----------------~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~ 103 (246)
T PF08450_consen 42 PNGMAFDRPDGRLYVA-DSGG-IAVVDPDTGK----------------VTVLADLPDGGVPFNRPNDVAVDPDGNLYVTD 103 (246)
T ss_dssp EEEEEEECTTSEEEEE-ETTC-EEEEETTTTE----------------EEEEEEEETTCSCTEEEEEEEE-TTS-EEEEE
T ss_pred CceEEEEccCCEEEEE-EcCc-eEEEecCCCc----------------EEEEeeccCCCcccCCCceEEEcCCCCEEEEe
Confidence 6777777 66555554 4444 5666876431 1122222 12 34568899999999988876
Q ss_pred eCC--------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEE------------------
Q psy15157 198 SKD--------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY------------------ 250 (344)
Q Consensus 198 ~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~------------------ 250 (344)
... |.|..++.. ++.... ...-...+.++|+|+++.|+++ +..+.|..+
T Consensus 104 ~~~~~~~~~~~g~v~~~~~~-~~~~~~---~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~ 179 (246)
T PF08450_consen 104 SGGGGASGIDPGSVYRIDPD-GKVTVV---ADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDF 179 (246)
T ss_dssp ECCBCTTCGGSEEEEEEETT-SEEEEE---EEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-
T ss_pred cCCCccccccccceEEECCC-CeEEEE---ecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEc
Confidence 654 557777766 332222 2234457889999999988754 444554443
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEEe
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSSG 305 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~~ 305 (344)
+.+|+++++....+.|.++|.. |+.+..+.... ..+++++|. ++.+.|+..+
T Consensus 180 ~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~--~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 180 PGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPV--PRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SS--SSEEEEEEESTTSSEEEEEE
T ss_pred CCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCC--CCEEEEEEECCCCCEEEEEe
Confidence 5678888887788999999977 88887776442 258999994 6666665443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.8e-05 Score=69.72 Aligned_cols=106 Identities=15% Similarity=0.156 Sum_probs=77.0
Q ss_pred EEEEECCCCCEEEEEeC----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 123 RAGAFSIDGQLCATGSV----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
+-..|+|...+||.++- .|+|.||-=. +.+.+... ..-.+++++|+|..-.|+.|-
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfadt-------------------GEPqr~Vt-~P~hatSLCWHpe~~vLa~gw 78 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFADT-------------------GEPQRDVT-YPVHATSLCWHPEEFVLAQGW 78 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEecC-------------------CCCCcccc-cceehhhhccChHHHHHhhcc
Confidence 44567887888777653 5888888421 11111110 111256799999998999999
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
.-|.+.+|...+.+... ....|..+|..+.|+++|..++++..-|.+.+|
T Consensus 79 e~g~~~v~~~~~~e~ht--v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lw 128 (1416)
T KOG3617|consen 79 EMGVSDVQKTNTTETHT--VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLW 128 (1416)
T ss_pred ccceeEEEecCCceeee--eccCCCCCceeEEecCCCCeEEEcCCCceeEEE
Confidence 99999999987754322 224588899999999999999999999999999
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00032 Score=61.60 Aligned_cols=74 Identities=14% Similarity=0.279 Sum_probs=51.6
Q ss_pred EcCCCCEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC---CcEEEEEcCCCeeEE-E
Q psy15157 250 YSSDGRIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD---SLVKLWELSSARCLI-A 323 (344)
Q Consensus 250 ~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~-~ 323 (344)
|.|.++.+++.+ .+..+.++|++.. ....+... .-+.+.|+|.+++++.++-| |.|-+||......+. .
T Consensus 282 W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~Pe~----~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~ 356 (561)
T COG5354 282 WEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFPEQ----KRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGA 356 (561)
T ss_pred ecccCCceeEEecccccceeecccccc-eEEecCCc----ccccccccCcccEEEEecCCccccceEEeccCCceEEEEE
Confidence 467777766655 6678889998766 44444322 34678899999999997754 679999997765444 6
Q ss_pred eecCC
Q psy15157 324 YTGAG 328 (344)
Q Consensus 324 ~~~~~ 328 (344)
|.+..
T Consensus 357 ~~~~n 361 (561)
T COG5354 357 FNGLN 361 (561)
T ss_pred eecCC
Confidence 66543
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.5e-06 Score=80.56 Aligned_cols=150 Identities=17% Similarity=0.269 Sum_probs=110.3
Q ss_pred CceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC--E
Q psy15157 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF--V 246 (344)
Q Consensus 169 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~ 246 (344)
.+..++++.|....+|++|+-+.++|+.|+..|.|+++++.+|.... ....|..+|+-+.-+.+|...++.+... .
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~--s~ncH~SavT~vePs~dgs~~Ltsss~S~Pl 1168 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEE--SVNCHQSAVTLVEPSVDGSTQLTSSSSSSPL 1168 (1516)
T ss_pred cccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccc--cccccccccccccccCCcceeeeeccccCch
Confidence 45567788899999999999999999999999999999999986543 3456889999999999998887655332 3
Q ss_pred EEEEc--------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC--CccEEEEEEccCCCEEEEE
Q psy15157 247 LRLYS--------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD--GAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 247 i~~~~--------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~i~~~~~~~~l~s~ 304 (344)
..+|. ..-..-+.|+......+||+.++....++..... ...-+...|+|+..+++--
T Consensus 1169 saLW~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIlnd 1248 (1516)
T KOG1832|consen 1169 SALWDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILND 1248 (1516)
T ss_pred HHHhccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEeeC
Confidence 44551 1111223455556789999999987766432211 1234778899999988754
Q ss_pred eCCCcEEEEEcCCCeeEEEee
Q psy15157 305 GKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~~ 325 (344)
| .+||++..+.++.|.
T Consensus 1249 G-----vLWDvR~~~aIh~FD 1264 (1516)
T KOG1832|consen 1249 G-----VLWDVRIPEAIHRFD 1264 (1516)
T ss_pred c-----eeeeeccHHHHhhhh
Confidence 4 699999988877764
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00071 Score=60.41 Aligned_cols=168 Identities=14% Similarity=0.091 Sum_probs=96.8
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
++..++.++.+|.+..+|..++....... . .+.+.+.... .+..++.++.+|.+..||..
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~------------------~-~~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~ 163 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAK------------------L-SSEVLSPPLV-ANGLVVVRTNDGRLTALDAA 163 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeec------------------c-CceeecCCEE-ECCEEEEECCCCeEEEEEcC
Confidence 35667777778888888876543322111 0 0111110001 23466777889999999999
Q ss_pred CCccccceeeeccccce---EEEEEecCCCEEEEEeCCCEEEEEcC--------------------------------CC
Q psy15157 210 KSSVRKAHKTIQESTFV---RCLSFHPCGDYMVVGTDHFVLRLYSS--------------------------------DG 254 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~~~~i~~~~~--------------------------------~~ 254 (344)
+++.............. .+... .+..++++..++.+..+++ .+
T Consensus 164 tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~ 241 (377)
T TIGR03300 164 TGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDG 241 (377)
T ss_pred CCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEEC
Confidence 88765443321110000 00011 1224444444444433211 23
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
..+++++.+|.++.||..+++.+...... ....... ++..++.++.||.|+.+|..+|+.+..+.
T Consensus 242 ~~vy~~~~~g~l~a~d~~tG~~~W~~~~~----~~~~p~~--~~~~vyv~~~~G~l~~~d~~tG~~~W~~~ 306 (377)
T TIGR03300 242 GQVYAVSYQGRVAALDLRSGRVLWKRDAS----SYQGPAV--DDNRLYVTDADGVVVALDRRSGSELWKND 306 (377)
T ss_pred CEEEEEEcCCEEEEEECCCCcEEEeeccC----CccCceE--eCCEEEEECCCCeEEEEECCCCcEEEccc
Confidence 45667788999999999999877655411 1222222 46678888899999999999998887663
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0034 Score=53.59 Aligned_cols=64 Identities=17% Similarity=0.323 Sum_probs=46.6
Q ss_pred cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEE-eCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSS-GKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
.|-++|+.+++.+..+...+ ++.+|..+.+.+ +|++. ..++.+.+||..+|+.+++.++-+...
T Consensus 270 eVWv~D~~t~krv~Ri~l~~---~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG~~~ 335 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLEH---PIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLGETP 335 (342)
T ss_dssp EEEEEETTTTEEEEEEEEEE---EESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---SSS-
T ss_pred EEEEEECCCCeEEEEEeCCC---ccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccCCCc
Confidence 48888999999999987543 578999998766 66554 458999999999999999998765543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0059 Score=54.91 Aligned_cols=41 Identities=12% Similarity=0.146 Sum_probs=34.9
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+++..|+.||+|++|+.-..+|.+.+.+..-.+.+..+.-.
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~ 257 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD 257 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC
Confidence 46999999999999999999999999987777777776654
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0011 Score=64.42 Aligned_cols=180 Identities=17% Similarity=0.265 Sum_probs=117.4
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.+.|.++.|-.+++.+..+..+|.|.+-|..++ .+.....-...|.+++|+||+..++..+
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~-------------------~~eivg~vd~GI~aaswS~Dee~l~liT 128 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETL-------------------ELEIVGNVDNGISAASWSPDEELLALIT 128 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccc-------------------ceeeeeeccCceEEEeecCCCcEEEEEe
Confidence 368999999999998888899999999987642 1223334567899999999999988888
Q ss_pred CCCcEEEEEc----CCCccc-------------------cceee----------------ec---cccceEEEEEecCCC
Q psy15157 199 KDKTVKMFDY----SKSSVR-------------------KAHKT----------------IQ---ESTFVRCLSFHPCGD 236 (344)
Q Consensus 199 ~dg~i~iwd~----~~~~~~-------------------~~~~~----------------~~---~~~~v~~~~~~~~~~ 236 (344)
.++++.+-+- -..+.. ..+.. .+ ....=+.+.|--+|.
T Consensus 129 ~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~ 208 (1265)
T KOG1920|consen 129 GRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGE 208 (1265)
T ss_pred CCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCc
Confidence 8777765442 000000 00000 00 011123588999999
Q ss_pred EEEEE-----eCCCEEEEE----------------------cCCCCEEEEE---eCCCcEEEEeCCCCeEEeee--cccC
Q psy15157 237 YMVVG-----TDHFVLRLY----------------------SSDGRIYCSG---SKDGDIKIWDGVSSKCVATF--SKAH 284 (344)
Q Consensus 237 ~l~~~-----~~~~~i~~~----------------------~~~~~~l~~~---~~dg~i~iwd~~~~~~~~~~--~~~~ 284 (344)
++++. .....+++| -|.|..+++- +.|+.|.+|..+ |-....+ ...-
T Consensus 209 ~fAVs~~~~~~~~RkirV~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~ 287 (1265)
T KOG1920|consen 209 YFAVSFVESETGTRKIRVYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPL 287 (1265)
T ss_pred EEEEEEEeccCCceeEEEecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcc
Confidence 99983 334778887 5677777764 345578888743 3222211 1112
Q ss_pred CCccEEEEEEccCCCEEEE---EeCCCcEEEEEcCCC
Q psy15157 285 DGAEISSLTFTRNGKYLLS---SGKDSLVKLWELSSA 318 (344)
Q Consensus 285 ~~~~v~~i~~~~~~~~l~s---~~~dg~i~vwd~~~~ 318 (344)
+...+..++|+.++..|++ ......|++|-+.+-
T Consensus 288 de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 288 DEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred cccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence 2234899999999999887 555556999987654
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.9e-05 Score=66.74 Aligned_cols=96 Identities=20% Similarity=0.158 Sum_probs=77.0
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeE-EEEEcCCCCEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT-CLEFHPSAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s 196 (344)
-...|.-+.|+|.-.++|++..+|.|.+..++ ++.+-++.-|...++ +++|.|||++|+.
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-------------------~qRlwtip~p~~~v~~sL~W~~DGkllaV 79 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-------------------WQRLWTIPIPGENVTASLCWRPDGKLLAV 79 (665)
T ss_pred cccceEEEEEcCccchhheeccCCcEEEEEec-------------------cceeEeccCCCCccceeeeecCCCCEEEE
Confidence 34578889999999999999999999998875 455667776777777 9999999999999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEec
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 233 (344)
|-.||+|++.|+.++....... ......|.++-|++
T Consensus 80 g~kdG~I~L~Dve~~~~l~~~~-~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 80 GFKDGTIRLHDVEKGGRLVSFL-FSVETDISKGIWDR 115 (665)
T ss_pred EecCCeEEEEEccCCCceeccc-cccccchheeeccc
Confidence 9999999999999986554432 22345677777764
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0012 Score=54.75 Aligned_cols=116 Identities=16% Similarity=0.088 Sum_probs=76.6
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw 269 (344)
++..+++++.++.|..||..+++.............. . .. .+..++.++.++.|+.+
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~--~--~~-------------------~~~~v~v~~~~~~l~~~ 91 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA--P--VV-------------------DGGRVYVGTSDGSLYAL 91 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG--E--EE-------------------ETTEEEEEETTSEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce--e--ee-------------------cccccccccceeeeEec
Confidence 5567777789999999999998766555432221111 0 01 23344456678899999
Q ss_pred eCCCCeEEeee-cccCCCc-cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 270 DGVSSKCVATF-SKAHDGA-EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 270 d~~~~~~~~~~-~~~~~~~-~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
|..+|+.+... ....... .........++..++.+..++.|+.+|+++|+.+..+....
T Consensus 92 d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 92 DAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp ETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred ccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence 99999988774 3211111 11222233347888999989999999999999999988744
|
... |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0014 Score=55.11 Aligned_cols=166 Identities=14% Similarity=0.134 Sum_probs=104.7
Q ss_pred eEEEEECC-CCCEEEEEeCCCe-EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 122 CRAGAFSI-DGQLCATGSVDAS-IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 122 v~~~~~s~-~~~~l~sg~~dg~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
...++.+| .+..++.+-.-|+ ..+||..++....... ...-+.|.+|. .|+++|++|++.=.
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~----------a~~gRHFyGHg------~fs~dG~~LytTEn 70 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLW----------APPGRHFYGHG------VFSPDGRLLYTTEN 70 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEc----------CCCCCEEecCE------EEcCCCCEEEEecc
Confidence 34567788 5667777777664 7789987654332211 12234555663 69999999888643
Q ss_pred -----CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCC-CEEEEEeCCCcEEEEeCCC
Q psy15157 200 -----DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG-RIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 200 -----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~iwd~~~ 273 (344)
.|.|-|||... ...+.-....+.-....+.+.|+|+.|+++... |..-...| ..|=....+.++...|..+
T Consensus 71 d~~~g~G~IgVyd~~~-~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGG--I~Thpd~GR~kLNl~tM~psL~~ld~~s 147 (305)
T PF07433_consen 71 DYETGRGVIGVYDAAR-GYRRIGEFPSHGIGPHELLLMPDGETLVVANGG--IETHPDSGRAKLNLDTMQPSLVYLDARS 147 (305)
T ss_pred ccCCCcEEEEEEECcC-CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCC--CccCcccCceecChhhcCCceEEEecCC
Confidence 48899999983 222333333344445668899999888887421 11110011 2333456677888889999
Q ss_pred CeEEeeecc--cCCCccEEEEEEccCCCEEEEEeC
Q psy15157 274 SKCVATFSK--AHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 274 ~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
|+.+..... .++...|..++++++|..++..-.
T Consensus 148 G~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~ 182 (305)
T PF07433_consen 148 GALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQY 182 (305)
T ss_pred CceeeeeecCccccccceeeEEecCCCcEEEEEec
Confidence 988876442 333356999999999987666543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0001 Score=60.72 Aligned_cols=165 Identities=18% Similarity=0.275 Sum_probs=107.1
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-----CCeEEEEEcCC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-----EEVTCLEFHPS 190 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~ 190 (344)
..|.-.|+++.|+.|...++++ .|-.|.+|+++.. ...-.+..++.|. .-|++..|+|.
T Consensus 169 NaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~---------------D~sFnIVDiKP~nmeeLteVItSaeFhp~ 232 (460)
T COG5170 169 NAHPYHINSISFNSDKETLLSA-DDLRINLWNLEII---------------DGSFNIVDIKPHNMEELTEVITSAEFHPE 232 (460)
T ss_pred ccceeEeeeeeecCchheeeec-cceeeeecccccc---------------CCceEEEeccCccHHHHHHHHhhcccCHh
Confidence 5788899999999999888887 5778999998631 1111233344443 45888999996
Q ss_pred CC-EEEEEeCCCcEEEEEcCCCcccc----ce--ee--------eccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 191 AP-ILASGSKDKTVKMFDYSKSSVRK----AH--KT--------IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 191 ~~-~l~s~~~dg~i~iwd~~~~~~~~----~~--~~--------~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
.. .+.=.+..|.|++-|++...... .+ .. ..-...|..+.|+++|+++++
T Consensus 233 ~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIls--------------- 297 (460)
T COG5170 233 MCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILS--------------- 297 (460)
T ss_pred HcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEE---------------
Confidence 54 55556778999999998543211 11 00 011345777889988777763
Q ss_pred EEEEEeCCCcEEEEeCCCC-eEEeeecccC----------CCc---cEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 256 IYCSGSKDGDIKIWDGVSS-KCVATFSKAH----------DGA---EISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~----------~~~---~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
- .--++++||.+.. .++.++.-+. +.. .-..+.|+-|.+.+++|+.....-++-+.
T Consensus 298 ----R-dyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~ 367 (460)
T COG5170 298 ----R-DYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTD 367 (460)
T ss_pred ----e-ccceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeeccc
Confidence 2 2347999998865 3455542111 001 12456788888899999888877777643
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00019 Score=63.62 Aligned_cols=124 Identities=14% Similarity=0.224 Sum_probs=83.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEe
Q psy15157 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGS 261 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~ 261 (344)
=+-+.|||-|.+|+|--.- -|.+|--.+-... .+ ..|. .|.-+.|||+.+||++-+..-...-|. -+
T Consensus 213 etyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~--~R-F~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~--------d~ 279 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQ-GIALWGGESFDRI--QR-FYHP-GVQFIDFSPNEKYLVTYSPEPIIVEED--------DN 279 (698)
T ss_pred eeeEEecCCceEEEEEecc-ceeeecCccHHHH--Hh-ccCC-CceeeecCCccceEEEecCCccccCcc--------cC
Confidence 4678999999999987654 4889975443222 22 2343 478899999999999755433221111 12
Q ss_pred CCCcEEEEeCCCCeEEeeecccCCCccE-EEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 262 KDGDIKIWDGVSSKCVATFSKAHDGAEI-SSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 262 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v-~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
....+.|||+++|.....+........+ .-..||.|++|++--.. ..|.||+..+-.
T Consensus 280 e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~ 337 (698)
T KOG2314|consen 280 EGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFM 337 (698)
T ss_pred CCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCcee
Confidence 3356999999999988887643222223 34589999999987765 568899887643
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.87 E-value=5e-05 Score=42.26 Aligned_cols=35 Identities=37% Similarity=0.538 Sum_probs=31.8
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEE
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD 147 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd 147 (344)
..+..|...|+++.|++++.++++++.|+.+++|+
T Consensus 6 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 6 KTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 44568999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.011 Score=49.01 Aligned_cols=179 Identities=14% Similarity=0.197 Sum_probs=102.9
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-cCCeEEEEEcCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH-IEEVTCLEFHPSA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~ 191 (344)
.+.+-...+..++|+|+.+ ++++....+.|...+.+ +..++.+.-. .+..-.|++..++
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-------------------G~vlr~i~l~g~~D~EgI~y~g~~ 76 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-------------------GKVLRRIPLDGFGDYEGITYLGNG 76 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---------------------EEEEEE-SS-SSEEEEEE-STT
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-------------------CCEEEEEeCCCCCCceeEEEECCC
Confidence 3455566799999999754 77777777888777763 3344444322 3567889998888
Q ss_pred CEEEEEeCCCcEEEEEcCCCcc-c-----cceee--e-ccccceEEEEEecCCCEEEEEeCCCEEEEE------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSV-R-----KAHKT--I-QESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~-~-----~~~~~--~-~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------ 250 (344)
.++++.-.++.+.++++..... . ..+.. . .++..+-.++|+|.++.++++....-..+|
T Consensus 77 ~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~ 156 (248)
T PF06977_consen 77 RYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLF 156 (248)
T ss_dssp EEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--E
T ss_pred EEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCcccee
Confidence 7777666689999999844221 0 11111 1 244568899999998888777655444444
Q ss_pred -----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-------CCccEEEEEEccCCCE
Q psy15157 251 -----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-------DGAEISSLTFTRNGKY 300 (344)
Q Consensus 251 -----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~v~~i~~~~~~~~ 300 (344)
...+++++....+..|..+| .+|+.+..+.... .-...-.|+|+++|+.
T Consensus 157 ~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~L 235 (248)
T PF06977_consen 157 VSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNL 235 (248)
T ss_dssp EEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--E
T ss_pred eccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCE
Confidence 34567777788888899999 6676655443211 1124678999999865
Q ss_pred EEEEeCCCcEEEE
Q psy15157 301 LLSSGKDSLVKLW 313 (344)
Q Consensus 301 l~s~~~dg~i~vw 313 (344)
.+ .++-+..++|
T Consensus 236 YI-vsEpNlfy~f 247 (248)
T PF06977_consen 236 YI-VSEPNLFYRF 247 (248)
T ss_dssp EE-EETTTEEEEE
T ss_pred EE-EcCCceEEEe
Confidence 44 4455555554
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.1e-05 Score=42.21 Aligned_cols=37 Identities=41% Similarity=0.659 Sum_probs=33.1
Q ss_pred eEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15157 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207 (344)
Q Consensus 171 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 207 (344)
....+..|...|.++.|++++..+++++.|+.+++||
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4556678889999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00022 Score=60.82 Aligned_cols=84 Identities=15% Similarity=0.188 Sum_probs=66.3
Q ss_pred eEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 171 VIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 171 ~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
....+.+|...|.+++|+|..+ ++..++.+..|+|.|+++......+. ....+++++|+-+..
T Consensus 185 ssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~---a~~~~wSC~wDlde~------------- 248 (463)
T KOG1645|consen 185 SSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYI---AYNQIWSCCWDLDER------------- 248 (463)
T ss_pred hhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehee---ccCCceeeeeccCCc-------------
Confidence 3456778889999999999877 78899999999999999875443332 237799999988643
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCe
Q psy15157 250 YSSDGRIYCSGSKDGDIKIWDGVSSK 275 (344)
Q Consensus 250 ~~~~~~~l~~~~~dg~i~iwd~~~~~ 275 (344)
+++..|-..|.|.|||++..+
T Consensus 249 -----h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 249 -----HVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred -----ceeEEeccCceEEEEEccCCC
Confidence 444578889999999998764
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0052 Score=43.31 Aligned_cols=67 Identities=24% Similarity=0.249 Sum_probs=47.9
Q ss_pred eEEEEECC---CC-CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 122 CRAGAFSI---DG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 122 v~~~~~s~---~~-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
|+++++.. +| +.|++|+.|..|++|+=+. .+..+. ..+.|+++.-... ..|+-+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--------------------~~~Ei~-e~~~v~~L~~~~~-~~F~Y~ 59 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--------------------IVAEIT-ETDKVTSLCSLGG-GRFAYA 59 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--------------------EEEEEe-cccceEEEEEcCC-CEEEEE
Confidence 66777654 33 4899999999999998642 233333 3456777776655 568888
Q ss_pred eCCCcEEEEEcCC
Q psy15157 198 SKDKTVKMFDYSK 210 (344)
Q Consensus 198 ~~dg~i~iwd~~~ 210 (344)
..+|+|-+|+-..
T Consensus 60 l~NGTVGvY~~~~ 72 (111)
T PF14783_consen 60 LANGTVGVYDRSQ 72 (111)
T ss_pred ecCCEEEEEeCcc
Confidence 9999999998643
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.004 Score=55.96 Aligned_cols=168 Identities=20% Similarity=0.240 Sum_probs=95.5
Q ss_pred EEecCCCceEEEEECCCCCEEEEEe---CC-CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGS---VD-ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~---~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.+..-...+..-+|+|++..++-.+ .. ..+.+++++++ ....+..+.++.. .-+|+|
T Consensus 187 ~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g----------------~~~~i~~~~g~~~---~P~fsp 247 (425)
T COG0823 187 KLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTG----------------KRPVILNFNGNNG---APAFSP 247 (425)
T ss_pred EecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCC----------------ccceeeccCCccC---CccCCC
Confidence 3444455667778888888654432 22 35888888642 2233344444443 458999
Q ss_pred CCCEE-EEEeCCCc--EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC--
Q psy15157 190 SAPIL-ASGSKDKT--VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG-- 264 (344)
Q Consensus 190 ~~~~l-~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg-- 264 (344)
||+.| ++...||. |.+.|+..+...+ .....+.-+.=.|+|+|++++..++ ..|
T Consensus 248 DG~~l~f~~~rdg~~~iy~~dl~~~~~~~---Lt~~~gi~~~Ps~spdG~~ivf~Sd------------------r~G~p 306 (425)
T COG0823 248 DGSKLAFSSSRDGSPDIYLMDLDGKNLPR---LTNGFGINTSPSWSPDGSKIVFTSD------------------RGGRP 306 (425)
T ss_pred CCCEEEEEECCCCCccEEEEcCCCCccee---cccCCccccCccCCCCCCEEEEEeC------------------CCCCc
Confidence 99855 45566776 5555666654322 1111111224567888888776432 223
Q ss_pred cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC-CCc--EEEEEcCCCeeEEEe
Q psy15157 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK-DSL--VKLWELSSARCLIAY 324 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-dg~--i~vwd~~~~~~~~~~ 324 (344)
.|.++|...+....... ... .. ..-.|+|||++|+..+. +|. |.+.|+.++..++.+
T Consensus 307 ~I~~~~~~g~~~~riT~-~~~-~~-~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l 366 (425)
T COG0823 307 QIYLYDLEGSQVTRLTF-SGG-GN-SNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL 366 (425)
T ss_pred ceEEECCCCCceeEeec-cCC-CC-cCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc
Confidence 57777777665432222 211 11 26789999999887764 344 777777666543333
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0038 Score=60.83 Aligned_cols=158 Identities=13% Similarity=0.148 Sum_probs=105.4
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------- 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------- 250 (344)
...|.++.|..+...++.+..+|.|.+-|..+.... .. ..-...|.+++|+|++..++..+..+++.+-
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-iv--g~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~ 144 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE-IV--GNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIA 144 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccccee-ee--eeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchh
Confidence 368999999999998888999999999988775432 11 2235679999999999999999887777662
Q ss_pred -----------------------------------------------------------cCCCCEEEE-----EeCCCcE
Q psy15157 251 -----------------------------------------------------------SSDGRIYCS-----GSKDGDI 266 (344)
Q Consensus 251 -----------------------------------------------------------~~~~~~l~~-----~~~dg~i 266 (344)
.-||.++++ ......|
T Consensus 145 E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rki 224 (1265)
T KOG1920|consen 145 EKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKI 224 (1265)
T ss_pred ccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeE
Confidence 347788887 3333789
Q ss_pred EEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE---eCCCcEEEEEcCCCeeEEEee--cCCCcCceeeeeeecc
Q psy15157 267 KIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS---GKDSLVKLWELSSARCLIAYT--GAGSMGQQFELTLTVD 341 (344)
Q Consensus 267 ~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~---~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 341 (344)
+|||.. |..- ....... +.-.+++|-|.|..+++- ++|+.|.+|.- +|-.-..|. ..-....+..+.|..+
T Consensus 225 rV~drE-g~Ln-s~se~~~-~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~ 300 (1265)
T KOG1920|consen 225 RVYDRE-GALN-STSEPVE-GLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSN 300 (1265)
T ss_pred EEeccc-chhh-cccCccc-ccccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCC
Confidence 999976 4322 2221111 235689999999998875 35667888875 333222222 2222222455555555
Q ss_pred CC
Q psy15157 342 AD 343 (344)
Q Consensus 342 ~~ 343 (344)
.+
T Consensus 301 sd 302 (1265)
T KOG1920|consen 301 SD 302 (1265)
T ss_pred CC
Confidence 44
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.018 Score=46.88 Aligned_cols=65 Identities=15% Similarity=0.106 Sum_probs=43.4
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeE-EEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT-CLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
-|++++.|.+.|.+++.+++++.... .+... +.|. .....+++.++..|+.|++.+..|.
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w------------------~f~~~-~~vk~~a~~d~~~glIycgshd~~~yalD~ 122 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIW------------------NFVIL-ETVKVRAQCDFDGGLIYCGSHDGNFYALDP 122 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhhee------------------eeeeh-hhhccceEEcCCCceEEEecCCCcEEEecc
Confidence 36789999999999999987642221 11111 1111 1234567889999999999999998
Q ss_pred CCCcc
Q psy15157 209 SKSSV 213 (344)
Q Consensus 209 ~~~~~ 213 (344)
.+...
T Consensus 123 ~~~~c 127 (354)
T KOG4649|consen 123 KTYGC 127 (354)
T ss_pred cccce
Confidence 76543
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.01 Score=53.33 Aligned_cols=131 Identities=10% Similarity=0.041 Sum_probs=79.4
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeecccc-----ceEEEEEec--CCCEEEEEeCCCEEEE---------Ec-----
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQEST-----FVRCLSFHP--CGDYMVVGTDHFVLRL---------YS----- 251 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~--~~~~l~~~~~~~~i~~---------~~----- 251 (344)
.++.++.+|.+..+|..+++............ ....+..+| .+..+++++.++.+.. |.
T Consensus 207 ~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~ 286 (394)
T PRK11138 207 GAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS 286 (394)
T ss_pred EEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC
Confidence 46667788999999988886544332211000 000011112 2445555555555443 31
Q ss_pred -----CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 252 -----SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 252 -----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
..+..++.++.+|.+..+|..+++.+........ ....+... .+.+|+.++.||.|++.|..+|+.+..++-
T Consensus 287 ~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~ 363 (394)
T PRK11138 287 VNDFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLH-RLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKV 363 (394)
T ss_pred ccCcEEECCEEEEEcCCCeEEEEECCCCcEEEcccccCC-CcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEc
Confidence 1345667788899999999999987654431111 11222333 256788899999999999999999888764
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.013 Score=48.34 Aligned_cols=166 Identities=14% Similarity=0.176 Sum_probs=100.8
Q ss_pred EECCCCCEEEEEeCC-----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC-
Q psy15157 126 AFSIDGQLCATGSVD-----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK- 199 (344)
Q Consensus 126 ~~s~~~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~- 199 (344)
.||+||.+|...-.| |.|-|||.+. ....+..+..|.-.-..+.|.+||+.++.+..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~-----------------~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGG 182 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDARE-----------------GFQRVGEFSTHGIGPHEVTLMADGRTLVVANGG 182 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEeccc-----------------ccceecccccCCcCcceeEEecCCcEEEEeCCc
Confidence 599999998876544 6788999863 24445566667666678889999998776532
Q ss_pred -----------------CCcEEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeCCCEEE-------EE---
Q psy15157 200 -----------------DKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTDHFVLR-------LY--- 250 (344)
Q Consensus 200 -----------------dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~i~-------~~--- 250 (344)
.-++.+.|..++.++...... .+.-.+..++..++|...+.+-..|.-. .+
T Consensus 183 IethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g 262 (366)
T COG3490 183 IETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKG 262 (366)
T ss_pred eecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCC
Confidence 123445555555554444433 3345678888888887776553222111 11
Q ss_pred --------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 251 --------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 --------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
..++-..+|.-..+...+||..+|..+..-.... ...+.-. ..-++..
T Consensus 263 ~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~d----aaGva~~--~~gf~vs 336 (366)
T COG3490 263 EPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPD----AAGVAAA--KGGFAVS 336 (366)
T ss_pred CcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecccccc----cccceec--cCceEEe
Confidence 2344555555555667899999998775543211 2333333 3335555
Q ss_pred eCCCcEEEEE
Q psy15157 305 GKDSLVKLWE 314 (344)
Q Consensus 305 ~~dg~i~vwd 314 (344)
+.+|.|.++.
T Consensus 337 sg~G~~~~~s 346 (366)
T COG3490 337 SGQGRIIFYS 346 (366)
T ss_pred cCCceEEecc
Confidence 6678777663
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0017 Score=58.58 Aligned_cols=148 Identities=14% Similarity=0.102 Sum_probs=79.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+....-.+..+.++|+|++++.+ .||.-.|+.... .... ..+.-...+|.+++ .+
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~------------------~r~k-----~~G~g~~~vw~~~n-~y 82 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALA------------------WRNK-----AFGSGLSFVWSSRN-RY 82 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTT------------------TEEE-----EEEE-SEEEE-TSS-EE
T ss_pred CCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccC------------------Cccc-----ccCceeEEEEecCc-cE
Confidence 33445568899999999999885 477788887421 1111 12344567898844 57
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++-...++|.|+.--+......+.. ...+..+-. |..|. ..+ ++.|.+||+.++
T Consensus 83 Av~~~~~~I~I~kn~~~~~~k~i~~---~~~~~~If~---G~LL~-------------------~~~-~~~i~~yDw~~~ 136 (443)
T PF04053_consen 83 AVLESSSTIKIYKNFKNEVVKSIKL---PFSVEKIFG---GNLLG-------------------VKS-SDFICFYDWETG 136 (443)
T ss_dssp EEE-TTS-EEEEETTEE-TT--------SS-EEEEE----SSSEE-------------------EEE-TTEEEEE-TTT-
T ss_pred EEEECCCeEEEEEcCccccceEEcC---CcccceEEc---CcEEE-------------------EEC-CCCEEEEEhhHc
Confidence 7777788999963222221112221 112222221 44443 333 447999999999
Q ss_pred eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+.+..+.. ..|..+.|+++|.+++..+.+ .+++++....
T Consensus 137 ~~i~~i~v----~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~ 175 (443)
T PF04053_consen 137 KLIRRIDV----SAVKYVIWSDDGELVALVTKD-SIYILKYNLE 175 (443)
T ss_dssp -EEEEESS-----E-EEEEE-TTSSEEEEE-S--SEEEEEE-HH
T ss_pred ceeeEEec----CCCcEEEEECCCCEEEEEeCC-eEEEEEecch
Confidence 99998862 248999999999999988855 6777665433
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0012 Score=60.55 Aligned_cols=118 Identities=20% Similarity=0.268 Sum_probs=79.2
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEE
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYC 258 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~ 258 (344)
...|.--++...+++++.|+.-|.+++|+-..+... ..+.......+..+..+++.. ++|
T Consensus 33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~-~~~~~~~~~~~~~~~vs~~e~-------------------lvA 92 (726)
T KOG3621|consen 33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMR-KLKNEGATGITCVRSVSSVEY-------------------LVA 92 (726)
T ss_pred cceEEEEEeecCCceEEEecccceEEEEecCchhhh-cccccCccceEEEEEecchhH-------------------hhh
Confidence 344555566677889999999999999997766543 222222333344455665444 444
Q ss_pred EEeCCCcEEEEeCCCCeE-----EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 259 SGSKDGDIKIWDGVSSKC-----VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
.|+..|.|.++-+..+.. +......| ...|++++|++|+..+++|...|.|.+-.+.+
T Consensus 93 agt~~g~V~v~ql~~~~p~~~~~~t~~d~~~-~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 93 AGTASGRVSVFQLNKELPRDLDYVTPCDKSH-KCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred hhcCCceEEeehhhccCCCcceeeccccccC-CceEEEEEecccccEEeecCCCceEEEEEech
Confidence 666677777776554321 11222223 35799999999999999999999999988877
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0091 Score=55.26 Aligned_cols=105 Identities=15% Similarity=0.152 Sum_probs=73.5
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCC----CccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSK----SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKD 263 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~d 263 (344)
.++|++... .++.|.+.|..+ +. .......-......+.++|||+++++ ++..+
T Consensus 285 vkdGK~~~V--~gn~V~VID~~t~~~~~~--~v~~yIPVGKsPHGV~vSPDGkylyV------------------anklS 342 (635)
T PRK02888 285 VKAGKFKTI--GGSKVPVVDGRKAANAGS--ALTRYVPVPKNPHGVNTSPDGKYFIA------------------NGKLS 342 (635)
T ss_pred hhCCCEEEE--CCCEEEEEECCccccCCc--ceEEEEECCCCccceEECCCCCEEEE------------------eCCCC
Confidence 446775554 367899999887 21 22333334556778899999998886 56667
Q ss_pred CcEEEEeCCCCeE------------EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 264 GDIKIWDGVSSKC------------VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 264 g~i~iwd~~~~~~------------~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
.++.|+|+.+.+. +.....+ ......+|+++|+...|---|..|..||+.+
T Consensus 343 ~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG---lGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 343 PTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG---LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CcEEEEEChhhhhhhhccCCccceEEEeeccC---CCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 8899999887542 3333321 2245678999998888888999999999976
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.038 Score=49.38 Aligned_cols=170 Identities=18% Similarity=0.188 Sum_probs=112.6
Q ss_pred ceEEEEECCCCCEEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 121 PCRAGAFSIDGQLCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
....++++++++.+..+.. ++++.+.|..+ .....+...-..+ ..+++.|++..++.+
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t------------------~~~~~~~~vG~~P-~~~a~~p~g~~vyv~ 177 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAAT------------------NKVTATIPVGNTP-TGVAVDPDGNKVYVT 177 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCceEEEEeCCC------------------CeEEEEEecCCCc-ceEEECCCCCeEEEE
Confidence 5678889999877666655 56777777643 2333332222233 789999999955554
Q ss_pred -eCCCcEEEEEcCCCcccccee---eeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy15157 198 -SKDKTVKMFDYSKSSVRKAHK---TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 198 -~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~ 273 (344)
..++.|.+.|........ -. ..........+.++|+|.++++... ++.++.+...|..+
T Consensus 178 ~~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~----------------~~~~~~v~~id~~~ 240 (381)
T COG3391 178 NSDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVAND----------------GSGSNNVLKIDTAT 240 (381)
T ss_pred ecCCCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEec----------------cCCCceEEEEeCCC
Confidence 478999999976654432 11 1122233456788888887765432 22257899999998
Q ss_pred CeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCeeEEEeecC
Q psy15157 274 SKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 274 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+............ ....+..+|+|+++.+.. ..+.+.+-|..+.+....+...
T Consensus 241 ~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~ 294 (381)
T COG3391 241 GNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTG 294 (381)
T ss_pred ceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeeccc
Confidence 8776652222222 356788999999998884 4488999999998887776544
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.019 Score=47.27 Aligned_cols=164 Identities=20% Similarity=0.192 Sum_probs=91.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE---ecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT---LYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.++.+.+|++||.- .|..|.|-..+..- ...+.. -+...-.=..++|+||+.+||.+...
T Consensus 2 ~~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf----------------~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~ 64 (282)
T PF15492_consen 2 HLALSSDGKLLAIL-QDQCIEIRSAKDDF----------------SSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAEST 64 (282)
T ss_pred ceeecCCCcEEEEE-eccEEEEEeccCCc----------------hheeEEEecCCCCCchheEEEECCCCcEEEEEcCC
Confidence 35677899988876 57778777654210 011111 12222234678999999999999999
Q ss_pred CcEEEEEcCCCccccceeee-----ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC--
Q psy15157 201 KTVKMFDYSKSSVRKAHKTI-----QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS-- 273 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~-- 273 (344)
|+|+++|+....+. .+... .-...|..+.|-+... . ..-...|++-..+|.++=|-+..
T Consensus 65 G~i~vfdl~g~~lf-~I~p~~~~~~d~~~Aiagl~Fl~~~~---s----------~~ws~ELlvi~Y~G~L~Sy~vs~gt 130 (282)
T PF15492_consen 65 GTIRVFDLMGSELF-VIPPAMSFPGDLSDAIAGLIFLEYKK---S----------AQWSYELLVINYRGQLRSYLVSVGT 130 (282)
T ss_pred CeEEEEecccceeE-EcCcccccCCccccceeeeEeecccc---c----------cccceeEEEEeccceeeeEEEEccc
Confidence 99999999764321 11110 0123344444543210 0 00122344455666666555321
Q ss_pred ---CeEEe--eecccCCCccEEEEEEccCCCEEEEEeC----CC-------cEEEEEcCCCe
Q psy15157 274 ---SKCVA--TFSKAHDGAEISSLTFTRNGKYLLSSGK----DS-------LVKLWELSSAR 319 (344)
Q Consensus 274 ---~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~s~~~----dg-------~i~vwd~~~~~ 319 (344)
.+..+ .+..+.. ..|+++.++|.-+.|++||. ++ -+..|.+-++.
T Consensus 131 ~q~y~e~hsfsf~~~yp-~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~ 191 (282)
T PF15492_consen 131 NQGYQENHSFSFSSHYP-HGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDS 191 (282)
T ss_pred CCcceeeEEEEecccCC-CceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCC
Confidence 12222 3332333 35999999999888887753 11 36777765543
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0046 Score=59.13 Aligned_cols=125 Identities=18% Similarity=0.229 Sum_probs=74.6
Q ss_pred CCCceEEEecCCcCC-eEEEEEcC-----CCCEEEEEeCCCcEEEEEcCCCcccccee----eeccccceEEEEEecCCC
Q psy15157 167 QGHPVIRTLYDHIEE-VTCLEFHP-----SAPILASGSKDKTVKMFDYSKSSVRKAHK----TIQESTFVRCLSFHPCGD 236 (344)
Q Consensus 167 ~~~~~~~~~~~h~~~-v~~~~~~~-----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~ 236 (344)
..++.+.....|... |..++-.. +....+.|-.+..+..||.+-.... ... .........|++-+
T Consensus 512 e~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k-~v~~~~k~Y~~~~~Fs~~aTt---- 586 (794)
T PF08553_consen 512 ERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNK-LVDSQSKQYSSKNNFSCFATT---- 586 (794)
T ss_pred CCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCc-eeeccccccccCCCceEEEec----
Confidence 345666666666543 55443221 1234566777899999998864311 111 01112223333322
Q ss_pred EEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 237 YMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 237 ~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
...++|+|+.+|.||+||. .|+...+... .-+.+|.+|+.+.||+||++.+ +..|.++++
T Consensus 587 ----------------~~G~iavgs~~G~IRLyd~-~g~~AKT~lp-~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 587 ----------------EDGYIAVGSNKGDIRLYDR-LGKRAKTALP-GLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred ----------------CCceEEEEeCCCcEEeecc-cchhhhhcCC-CCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 3345668999999999994 3333333322 2246899999999999988777 567777776
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.038 Score=51.96 Aligned_cols=171 Identities=15% Similarity=0.220 Sum_probs=93.0
Q ss_pred CCCEEEEEeCC-C-----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCc-
Q psy15157 130 DGQLCATGSVD-A-----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKT- 202 (344)
Q Consensus 130 ~~~~l~sg~~d-g-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~- 202 (344)
++.+.++||.| | ++..||..+. .+..+..+.......... .-+|.+.+.|+.||.
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~----------------~W~~~a~M~~~R~~~~v~--~l~g~iYavGG~dg~~ 393 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTN----------------QWTPVAPMNTKRSDFGVA--VLDGKLYAVGGFDGEK 393 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCC----------------ceeccCCccCccccceeE--EECCEEEEEecccccc
Confidence 56889999999 3 4556666431 122222222222221111 126778899998855
Q ss_pred ----EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE------EEE----------------------
Q psy15157 203 ----VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL------RLY---------------------- 250 (344)
Q Consensus 203 ----i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i------~~~---------------------- 250 (344)
|-.||..+.+................. .-+|...++|+.++.- ..|
T Consensus 394 ~l~svE~YDp~~~~W~~va~m~~~r~~~gv~--~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~ 471 (571)
T KOG4441|consen 394 SLNSVECYDPVTNKWTPVAPMLTRRSGHGVA--VLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGV 471 (571)
T ss_pred ccccEEEecCCCCcccccCCCCcceeeeEEE--EECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceE
Confidence 778888776543222211111111111 2267777777755443 334
Q ss_pred -cCCCCEEEEEeCCCc-----EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCc-----EEEEEcCCCe
Q psy15157 251 -SSDGRIYCSGSKDGD-----IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL-----VKLWELSSAR 319 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~-----i~vwd~~~~~ 319 (344)
.-++.+++.|+.|+. |..||..+.+....-.-......+....+ +++..++|+.||. |..||..+++
T Consensus 472 a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 472 AVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred EEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEEEecccCccccceeEEcCCCCCc
Confidence 346778888888863 77788877654433211111111222223 5777888888764 7778887765
Q ss_pred eEE
Q psy15157 320 CLI 322 (344)
Q Consensus 320 ~~~ 322 (344)
...
T Consensus 550 W~~ 552 (571)
T KOG4441|consen 550 WTE 552 (571)
T ss_pred eee
Confidence 543
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.014 Score=41.26 Aligned_cols=100 Identities=20% Similarity=0.277 Sum_probs=56.4
Q ss_pred eEEEEEcC---CC-CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEE
Q psy15157 182 VTCLEFHP---SA-PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY 257 (344)
Q Consensus 182 v~~~~~~~---~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l 257 (344)
|+++++.. +| +.|+.|+.|..|++|+-.. .... ......+++++-... ..++
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--~~~E---i~e~~~v~~L~~~~~-~~F~------------------ 57 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--IVAE---ITETDKVTSLCSLGG-GRFA------------------ 57 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--EEEE---EecccceEEEEEcCC-CEEE------------------
Confidence 55666544 44 4899999999999998543 2222 234556777776553 3344
Q ss_pred EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-C--C-CEEEEEeCCCcEE
Q psy15157 258 CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-N--G-KYLLSSGKDSLVK 311 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~--~-~~l~s~~~dg~i~ 311 (344)
.+-.+|+|-+|+... .+..++..+ .++++.+.. + | .-|++|-.+|.|-
T Consensus 58 -Y~l~NGTVGvY~~~~--RlWRiKSK~---~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 58 -YALANGTVGVYDRSQ--RLWRIKSKN---QVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -EEecCCEEEEEeCcc--eeeeeccCC---CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 455556666665321 122222222 245554432 3 2 2588888888764
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.012 Score=54.59 Aligned_cols=127 Identities=11% Similarity=0.114 Sum_probs=87.1
Q ss_pred EEEcCCCCEEE-EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC---------------EEE
Q psy15157 185 LEFHPSAPILA-SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF---------------VLR 248 (344)
Q Consensus 185 ~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---------------~i~ 248 (344)
+-+.|+|+.+. +.-..+.+.+.|..+.+....+... .....++++++|+++++.+.+. .+.
T Consensus 198 ~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vd---gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~v 274 (635)
T PRK02888 198 IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVD---GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVV 274 (635)
T ss_pred cccCCCCCEeecccceeEEEEEEECccceEEEEEEeC---CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEE
Confidence 44567887553 3444678888898876554444432 2345678999999998886221 222
Q ss_pred EE--------cCCCCEEEEEeCCCcEEEEeCCC-----CeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEE
Q psy15157 249 LY--------SSDGRIYCSGSKDGDIKIWDGVS-----SKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWE 314 (344)
Q Consensus 249 ~~--------~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd 314 (344)
.+ .++|++... .++.|.+.|.++ .+.+..+..+ .....+.++|||+++++++ .+.+|.|.|
T Consensus 275 vfni~~iea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVG---KsPHGV~vSPDGkylyVanklS~tVSVID 349 (635)
T PRK02888 275 VFNIARIEEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVP---KNPHGVNTSPDGKYFIANGKLSPTVTVID 349 (635)
T ss_pred EEchHHHHHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECC---CCccceEECCCCCEEEEeCCCCCcEEEEE
Confidence 23 456777665 367899999998 3555555432 2478899999999987765 589999999
Q ss_pred cCCCe
Q psy15157 315 LSSAR 319 (344)
Q Consensus 315 ~~~~~ 319 (344)
+.+.+
T Consensus 350 v~k~k 354 (635)
T PRK02888 350 VRKLD 354 (635)
T ss_pred Chhhh
Confidence 98855
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00091 Score=60.49 Aligned_cols=69 Identities=16% Similarity=0.238 Sum_probs=49.7
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceE-EEEEecCCCEEEEEeCCCEEEEE
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVR-CLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
...|.-+.|+|.-.++|.+..+|.|.+..++-. ....+.+ ++..++ +++|.|+|+.+++|-.||+|++.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~q-Rlwtip~--p~~~v~~sL~W~~DGkllaVg~kdG~I~L~ 89 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNWQ-RLWTIPI--PGENVTASLCWRPDGKLLAVGFKDGTIRLH 89 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEeccc-eeEeccC--CCCccceeeeecCCCCEEEEEecCCeEEEE
Confidence 346788999999999999999999999988743 2333332 344455 99999988777765555554444
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.043 Score=45.50 Aligned_cols=167 Identities=11% Similarity=0.159 Sum_probs=91.5
Q ss_pred EecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--
Q psy15157 174 TLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-- 250 (344)
Q Consensus 174 ~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-- 250 (344)
.+.+-...+..++|+|+.. ++++....+.|...+.. ++..+.+...+ ....-.+++..++.++++.-.++.+.++
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 4556666799999999766 66666777888888864 66666555433 3446777887777666655446655543
Q ss_pred --------------------------------cCCCCEEEEEeCCCcEEEEeCCC---CeEEee-----ec-ccCCCccE
Q psy15157 251 --------------------------------SSDGRIYCSGSKDGDIKIWDGVS---SKCVAT-----FS-KAHDGAEI 289 (344)
Q Consensus 251 --------------------------------~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~-----~~-~~~~~~~v 289 (344)
++.++.|+.+-...-..+|.+.. ...+.. +. .......+
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (248)
T PF06977_consen 94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDL 173 (248)
T ss_dssp ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS--
T ss_pred eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccc
Confidence 66666666676666666666543 111111 11 01112348
Q ss_pred EEEEEccC-CCEEEEEeCCCcEEEEEcCCCeeEEEeecCC-------CcCceeeeeeeccCC
Q psy15157 290 SSLTFTRN-GKYLLSSGKDSLVKLWELSSARCLIAYTGAG-------SMGQQFELTLTVDAD 343 (344)
Q Consensus 290 ~~i~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 343 (344)
.++.++|. +++++.+..+..|..+| .+|+.+..+.-.. ...+..-+++..++.
T Consensus 174 S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~ 234 (248)
T PF06977_consen 174 SGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGN 234 (248)
T ss_dssp -EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--
T ss_pred cceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCC
Confidence 89999995 56667777888899999 6888777665432 223455555555543
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.034 Score=48.45 Aligned_cols=147 Identities=10% Similarity=0.178 Sum_probs=83.9
Q ss_pred CCEEEEEeC----------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEE--EecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 131 GQLCATGSV----------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR--TLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 131 ~~~l~sg~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
..+++.|.. .|.|.++++... ......+. .-....++|++++-. ++. |+.+.
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~--------------~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~ 105 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISES--------------PENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV 105 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-------------------EEEEEEEEEESS-EEEEEEE-TTE-EEEEE
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcc--------------cccceEEEEEEEEeecCcceEhhhh-CCE-EEEee
Confidence 457777654 288999999642 00001111 122347889998876 343 44433
Q ss_pred CCCcEEEEEcCCCc-cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CeE
Q psy15157 199 KDKTVKMFDYSKSS-VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS-SKC 276 (344)
Q Consensus 199 ~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~ 276 (344)
.+.|.+|++...+ ...... ......+.++... +++++ .|.....+.++.... ...
T Consensus 106 -g~~l~v~~l~~~~~l~~~~~-~~~~~~i~sl~~~--~~~I~-------------------vgD~~~sv~~~~~~~~~~~ 162 (321)
T PF03178_consen 106 -GNKLYVYDLDNSKTLLKKAF-YDSPFYITSLSVF--KNYIL-------------------VGDAMKSVSLLRYDEENNK 162 (321)
T ss_dssp -TTEEEEEEEETTSSEEEEEE-E-BSSSEEEEEEE--TTEEE-------------------EEESSSSEEEEEEETTTE-
T ss_pred -cCEEEEEEccCcccchhhhe-ecceEEEEEEecc--ccEEE-------------------EEEcccCEEEEEEEccCCE
Confidence 4899999998876 322222 2223345555543 33444 566666666663332 232
Q ss_pred EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 277 VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 277 ~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+..+.......+++++.|-++++.++.+..+|.+.++...
T Consensus 163 l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 163 LILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 3333323333568999998776799999999999999886
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.037 Score=49.74 Aligned_cols=166 Identities=13% Similarity=0.092 Sum_probs=95.9
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEE-EEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC-LEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
+..++.++.+|.+.-+|.+++........ . +.+.+ ... .+..++.++.+|.+..+|..
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~------------------~-~~~~ssP~v--~~~~v~v~~~~g~l~ald~~ 178 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKV------------------A-GEALSRPVV--SDGLVLVHTSNGMLQALNES 178 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccC------------------C-CceecCCEE--ECCEEEEECCCCEEEEEEcc
Confidence 55677788899999999876654432210 0 11111 011 13456667788999999999
Q ss_pred CCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEE---------Ec-----C------------------CCC
Q psy15157 210 KSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRL---------YS-----S------------------DGR 255 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~---------~~-----~------------------~~~ 255 (344)
+++................ .-+| .+..+++++.++.+.. |. + .+.
T Consensus 179 tG~~~W~~~~~~~~~~~~~-~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~ 257 (394)
T PRK11138 179 DGAVKWTVNLDVPSLTLRG-ESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGG 257 (394)
T ss_pred CCCEeeeecCCCCcccccC-CCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECC
Confidence 9876554432110000000 0011 1223444444544432 21 1 244
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
.++.++.+|.+..+|..+|+.+....... ...+.. .+..|+.++.+|.++.+|..+|+.+-..
T Consensus 258 ~vy~~~~~g~l~ald~~tG~~~W~~~~~~----~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~~ 320 (394)
T PRK11138 258 VVYALAYNGNLVALDLRSGQIVWKREYGS----VNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWSQ 320 (394)
T ss_pred EEEEEEcCCeEEEEECCCCCEEEeecCCC----ccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEcc
Confidence 56677889999999999998765543211 122222 4667888889999999999999876554
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.078 Score=47.38 Aligned_cols=163 Identities=13% Similarity=0.163 Sum_probs=102.6
Q ss_pred ceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.-..+++++.+. .+++...+..|.+.|..+. ....... -...-..++++++++.+..+..
T Consensus 75 ~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~------------------~~~~~~~-vG~~P~~~~~~~~~~~vYV~n~ 135 (381)
T COG3391 75 YPAGVAVNPAGNKVYVTTGDSNTVSVIDTATN------------------TVLGSIP-VGLGPVGLAVDPDGKYVYVANA 135 (381)
T ss_pred cccceeeCCCCCeEEEecCCCCeEEEEcCccc------------------ceeeEee-eccCCceEEECCCCCEEEEEec
Confidence 345678888777 5555555688999996431 1111111 1114568899999976655544
Q ss_pred ---CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE
Q psy15157 200 ---DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC 276 (344)
Q Consensus 200 ---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 276 (344)
++++.+.|-.+.+....... ...+ ..++++|+|..++++ -..++.|.+.|......
T Consensus 136 ~~~~~~vsvid~~t~~~~~~~~v--G~~P-~~~a~~p~g~~vyv~------------------~~~~~~v~vi~~~~~~v 194 (381)
T COG3391 136 GNGNNTVSVIDAATNKVTATIPV--GNTP-TGVAVDPDGNKVYVT------------------NSDDNTVSVIDTSGNSV 194 (381)
T ss_pred ccCCceEEEEeCCCCeEEEEEec--CCCc-ceEEECCCCCeEEEE------------------ecCCCeEEEEeCCCcce
Confidence 68888888887765544221 1223 778899988877653 34567788888665554
Q ss_pred Ee-eec-ccCCCccEEEEEEccCCCEEEEEeCC---CcEEEEEcCCCeeEEE
Q psy15157 277 VA-TFS-KAHDGAEISSLTFTRNGKYLLSSGKD---SLVKLWELSSARCLIA 323 (344)
Q Consensus 277 ~~-~~~-~~~~~~~v~~i~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~ 323 (344)
.. ... .-........+.++|+|+++.+.... +.+...|..++.....
T Consensus 195 ~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~ 246 (381)
T COG3391 195 VRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT 246 (381)
T ss_pred eccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe
Confidence 42 100 00111235678999999977665443 5899999988877665
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0014 Score=61.75 Aligned_cols=118 Identities=20% Similarity=0.240 Sum_probs=80.8
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeC---------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSV---------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE 181 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 181 (344)
....+..|++.|.++.. .|+.|+|+|. |..|+|||++.+.... -+..+.++
T Consensus 209 ~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~------------------PI~~~~~P 268 (1118)
T KOG1275|consen 209 TIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALS------------------PIQFPYGP 268 (1118)
T ss_pred eeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccC------------------CcccccCc
Confidence 34567899999987766 4999999887 4568999997543222 11222222
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEE---cCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 182 VTCLEFHPSAP-ILASGSKDKTVKMFD---YSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 182 v~~~~~~~~~~-~l~s~~~dg~i~iwd---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
.-+.|+|.-. .++.++..|...+-| +..... ...........+..++++++|+.++.|..+|.|.+|
T Consensus 269 -~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~-~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~w 339 (1118)
T KOG1275|consen 269 -QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPA-GVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLW 339 (1118)
T ss_pred -hhhhhcccccceEEEEecccceeeccccccCCCcc-ceeEEccCCCcceeEEecCCCceEEEecccCcEeee
Confidence 4567788543 777888889999999 433321 222223344558899999999999988888888888
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.13 Score=46.01 Aligned_cols=76 Identities=13% Similarity=0.291 Sum_probs=54.0
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCC----------------CE-EEEEeCCCcEEE
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNG----------------KY-LLSSGKDSLVKL 312 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~----------------~~-l~s~~~dg~i~v 312 (344)
+|++++.++...-|.|.++|+.++..++.+++..+ +.+.=+... ... .+ ++-.-.-|.|-|
T Consensus 316 sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRd-Aqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprRg~lEv 394 (415)
T PF14655_consen 316 SPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRD-AQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRRGILEV 394 (415)
T ss_pred CCCCCEEEEEcCCCcEEEEECCCChhhhhhccCcc-ceEEEEEeecccccccccccccCCCCcceEEEEEEeccCCeEEE
Confidence 78899998888889999999999998888875433 222111111 111 12 334567899999
Q ss_pred EEcCCCeeEEEeecC
Q psy15157 313 WELSSARCLIAYTGA 327 (344)
Q Consensus 313 wd~~~~~~~~~~~~~ 327 (344)
|.++.|..+..|.-.
T Consensus 395 W~~~~g~Rv~a~~v~ 409 (415)
T PF14655_consen 395 WSMRQGPRVAAFNVG 409 (415)
T ss_pred EecCCCCEEEEEEeC
Confidence 999999999988753
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.001 Score=62.32 Aligned_cols=109 Identities=22% Similarity=0.380 Sum_probs=79.4
Q ss_pred EEEEEcCCCCEEEEEeC----CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEE
Q psy15157 183 TCLEFHPSAPILASGSK----DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYC 258 (344)
Q Consensus 183 ~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~ 258 (344)
+-..|+|...+|+.++. .|+|.||- .+|+....... +-.+++++|+|..-.++
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~---P~hatSLCWHpe~~vLa------------------- 75 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY---PVHATSLCWHPEEFVLA------------------- 75 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccc---ceehhhhccChHHHHHh-------------------
Confidence 44679999998887764 58888884 45543332222 23356799999554444
Q ss_pred EEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.|-.-|.+.+|...+.+.. +....|. .+|..+.|+++|..|+++..-|.+.+|...
T Consensus 76 ~gwe~g~~~v~~~~~~e~h-tv~~th~-a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 76 QGWEMGVSDVQKTNTTETH-TVVETHP-APIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hccccceeEEEecCCceee-eeccCCC-CCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 5667788999997766544 4443454 679999999999999999999999999875
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.013 Score=47.73 Aligned_cols=113 Identities=12% Similarity=0.149 Sum_probs=80.4
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd 270 (344)
..+++.|+..+.+.--|..+++....... ...+.+-+. + -|.+++.|+..|.+++.+
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~il---g~RiE~sa~-------v-------------vgdfVV~GCy~g~lYfl~ 79 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL---GVRIECSAI-------V-------------VGDFVVLGCYSGGLYFLC 79 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhh---CceeeeeeE-------E-------------ECCEEEEEEccCcEEEEE
Confidence 34788889999999889888865433221 222322211 1 144566899999999999
Q ss_pred CCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.++|.....+..... -. ......+++..+..|+.|++.+..|.++..++.+.+-.+
T Consensus 80 ~~tGs~~w~f~~~~~-vk-~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG 135 (354)
T KOG4649|consen 80 VKTGSQIWNFVILET-VK-VRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGG 135 (354)
T ss_pred ecchhheeeeeehhh-hc-cceEEcCCCceEEEecCCCcEEEecccccceEEecccCC
Confidence 999988777753322 12 334568899999999999999999999999998876443
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0092 Score=53.27 Aligned_cols=129 Identities=16% Similarity=0.251 Sum_probs=76.2
Q ss_pred CCceEEEecCCcCCeEEEEEcCCCC--E-----EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEE
Q psy15157 168 GHPVIRTLYDHIEEVTCLEFHPSAP--I-----LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 168 ~~~~~~~~~~h~~~v~~~~~~~~~~--~-----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
.++.+....-|.. |+-+.+.|+.+ . -+.|-.|..|+-||.+-.... .+.... .-.|+...++=..
T Consensus 365 ~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~-kl~~~q------~kqy~~k~nFsc~ 436 (644)
T KOG2395|consen 365 RGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN-KLAVVQ------SKQYSTKNNFSCF 436 (644)
T ss_pred cceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc-eeeeee------cccccccccccee
Confidence 3556666666655 77777777543 1 234667889999998743221 111111 1112221111111
Q ss_pred EeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 241 GTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 241 ~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
++ ....++++||.+|.|++||. .+....+...+ -+.+|..+..+.+|++|+..+ +..+.+.++.
T Consensus 437 aT---------T~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPg-LG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~ 500 (644)
T KOG2395|consen 437 AT---------TESGYIVVGSLKGDIRLYDR-IGRRAKTALPG-LGDAIKHVDVTADGKWILATC-KTYLLLIDTL 500 (644)
T ss_pred ee---------cCCceEEEeecCCcEEeehh-hhhhhhhcccc-cCCceeeEEeeccCcEEEEec-ccEEEEEEEe
Confidence 11 13446778999999999996 55444333322 345799999999999988766 6677776663
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.084 Score=50.08 Aligned_cols=111 Identities=8% Similarity=0.101 Sum_probs=68.7
Q ss_pred EecCCCc-eEEEEECCCCCEEEEEeCCC-----eEEEEEcCCccccccCCCCCCcCCCCCCceE--EEecC-----CcCC
Q psy15157 115 VTSHKSP-CRAGAFSIDGQLCATGSVDA-----SIKILDVDRMLAKSSMESSEPQNDQQGHPVI--RTLYD-----HIEE 181 (344)
Q Consensus 115 ~~~h~~~-v~~~~~s~~~~~l~sg~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----h~~~ 181 (344)
+.++... |..+..-....+|++.+.|+ .|+||+++..... ....++ ..+.. ...+
T Consensus 60 fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n------------~sP~c~~~~ri~~~~np~~~~p 127 (933)
T KOG2114|consen 60 FQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN------------NSPQCLYEHRIFTIKNPTNPSP 127 (933)
T ss_pred heecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC------------CCcceeeeeeeeccCCCCCCCc
Confidence 3455555 55554444446888877765 4999999742110 101222 11222 3567
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEc--CCCccccceeeeccccceEEEEEecCCCE
Q psy15157 182 VTCLEFHPSAPILASGSKDKTVKMFDY--SKSSVRKAHKTIQESTFVRCLSFHPCGDY 237 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 237 (344)
+.+++.+.+-+.++.|-.||.|..+.- ...+..+..-......+|+.+.+..++..
T Consensus 128 ~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s 185 (933)
T KOG2114|consen 128 ASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKS 185 (933)
T ss_pred ceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCce
Confidence 899999999889999999999998852 11111122222335678999999988877
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.045 Score=47.67 Aligned_cols=157 Identities=17% Similarity=0.187 Sum_probs=83.1
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
....++|++++-- ++. ++.+. ++.|.+|++.... .......+ .....+.++... +++++
T Consensus 85 ~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~---------------~l~~~~~~-~~~~~i~sl~~~--~~~I~ 143 (321)
T PF03178_consen 85 TEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSK---------------TLLKKAFY-DSPFYITSLSVF--KNYIL 143 (321)
T ss_dssp EEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTS---------------SEEEEEEE--BSSSEEEEEEE--TTEEE
T ss_pred EeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcc---------------cchhhhee-cceEEEEEEecc--ccEEE
Confidence 4568899999876 444 44433 5889999996321 01111222 222366676665 45899
Q ss_pred EEeCCCcEEEEEcCCC-ccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC-
Q psy15157 196 SGSKDKTVKMFDYSKS-SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS- 273 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~- 273 (344)
.|.....+.++.++.. .....+........++++.+-++++.++ .+..+|.+.++....
T Consensus 144 vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i-------------------~~D~~gnl~~l~~~~~ 204 (321)
T PF03178_consen 144 VGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTII-------------------VGDKDGNLFVLRYNPE 204 (321)
T ss_dssp EEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEE-------------------EEETTSEEEEEEE-SS
T ss_pred EEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEE-------------------EEcCCCeEEEEEECCC
Confidence 9999899998866542 2122333333455678888876555555 455555555554331
Q ss_pred ------Ce-EEeeecccCCCccEEEE---EEcc--CC------CEEEEEeCCCcEEE
Q psy15157 274 ------SK-CVATFSKAHDGAEISSL---TFTR--NG------KYLLSSGKDSLVKL 312 (344)
Q Consensus 274 ------~~-~~~~~~~~~~~~~v~~i---~~~~--~~------~~l~s~~~dg~i~v 312 (344)
+. .+......|-+..|+++ .+.| .+ ..++-++.+|.|.+
T Consensus 205 ~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~ 261 (321)
T PF03178_consen 205 IPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGV 261 (321)
T ss_dssp -SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEE
T ss_pred CcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEE
Confidence 11 22222223334457776 4444 12 24777888888874
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.14 Score=43.00 Aligned_cols=196 Identities=12% Similarity=0.133 Sum_probs=114.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-----CcCCeEEEEEcCCCC---
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-----HIEEVTCLEFHPSAP--- 192 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~--- 192 (344)
.-+.|+|+|.+.+-++...-+...+||.+...... ...+.+.++.. -....+.+.|+....
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g-----------~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~v 92 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPL-----------VQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVV 92 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccC-----------CccceEEEecCCCCCCCCCCccEEEEeCCCceEE
Confidence 46889999988887777778899999986210000 01112222221 123456666664222
Q ss_pred ---------EEEEEeCCCcEEEEEcCCCcc---ccceeee-ccccc-eEEEEEec--CCCEEEEEe-CCCEEEEEc----
Q psy15157 193 ---------ILASGSKDKTVKMFDYSKSSV---RKAHKTI-QESTF-VRCLSFHP--CGDYMVVGT-DHFVLRLYS---- 251 (344)
Q Consensus 193 ---------~l~s~~~dg~i~iwd~~~~~~---~~~~~~~-~~~~~-v~~~~~~~--~~~~l~~~~-~~~~i~~~~---- 251 (344)
.++.+++||+|.-|.-.-... ....... ..... -..+++.. .+.+|+.+. .+++|.+|+
T Consensus 93 t~~g~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~ 172 (336)
T TIGR03118 93 SGEGITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFR 172 (336)
T ss_pred cCCCcccceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccc
Confidence 367889999999998533221 1111111 11122 23345543 356665553 577888871
Q ss_pred ------------------------CCCCEE-------------EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEE
Q psy15157 252 ------------------------SDGRIY-------------CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294 (344)
Q Consensus 252 ------------------------~~~~~l-------------~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~ 294 (344)
-.++++ +.|-.-|.|-+||. .+..++++.....-...+.|+.
T Consensus 173 ~~~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~ 251 (336)
T TIGR03118 173 PPPLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAI 251 (336)
T ss_pred cccCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeee
Confidence 112222 23444578999996 4667776643322234567777
Q ss_pred cc------CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 295 TR------NGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 295 ~~------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.| .|.+|+--=.||+|..||..+|+.+-.+....
T Consensus 252 APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~ 291 (336)
T TIGR03118 252 APESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPD 291 (336)
T ss_pred ChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCC
Confidence 55 45666665569999999999998877776543
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.026 Score=53.04 Aligned_cols=132 Identities=9% Similarity=0.069 Sum_probs=73.6
Q ss_pred CCCEEEEEeCCC-----cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC-------------------
Q psy15157 190 SAPILASGSKDK-----TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF------------------- 245 (344)
Q Consensus 190 ~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~------------------- 245 (344)
++++.+.||.++ ++..||..+.+................+. -+|...++|+.++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~ 428 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT 428 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccc
Confidence 567778888764 47889988765432222111111111122 2566666676542
Q ss_pred ----EEEEEc-----------------------CCCCEEEEEeCC------CcEEEEeCCC-CeE--EeeecccCCCccE
Q psy15157 246 ----VLRLYS-----------------------SDGRIYCSGSKD------GDIKIWDGVS-SKC--VATFSKAHDGAEI 289 (344)
Q Consensus 246 ----~i~~~~-----------------------~~~~~l~~~~~d------g~i~iwd~~~-~~~--~~~~~~~~~~~~v 289 (344)
.+..|+ -+|++++.|+.+ ..+..||..+ .+. +..+.... ...
T Consensus 429 ~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r--~~~ 506 (557)
T PHA02713 429 HSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRL--SAL 506 (557)
T ss_pred cccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccc--ccc
Confidence 344453 245667777654 2467888876 433 33332211 112
Q ss_pred EEEEEccCCCEEEEEeCCC--cEEEEEcCCCeeEEEeecC
Q psy15157 290 SSLTFTRNGKYLLSSGKDS--LVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~ 327 (344)
..+.+ +|++.++||.|| .+..||..+.+--.....|
T Consensus 507 ~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~ 544 (557)
T PHA02713 507 HTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQH 544 (557)
T ss_pred eeEEE--CCEEEEEeeecceeehhhcCcccccccchhhhc
Confidence 33333 688889999888 7888998887765444443
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.08 Score=49.91 Aligned_cols=105 Identities=13% Similarity=0.002 Sum_probs=60.9
Q ss_pred CceEEEEECCCCCEEEEEe------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 120 SPCRAGAFSIDGQLCATGS------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
..+...++||+|+.+|... .|..-.||-...+ ........+. ..+.-.|+|+|..
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-----------------g~~~~lt~g~--~~t~PsWspDG~~ 410 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-----------------GVAVQVLEGH--SLTRPSWSLDADA 410 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-----------------CcceeeecCC--CCCCceECCCCCc
Confidence 4678889999999877665 2444455543210 1111112222 3677889999887
Q ss_pred EEEEeCC------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 194 LASGSKD------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 194 l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
+++.... +.+.+.++..+.... .....|..+.|+|||..++.... +.+.+
T Consensus 411 lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-----~~~g~Issl~wSpDG~RiA~i~~-g~v~V 472 (591)
T PRK13616 411 VWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-----RVPGPISELQLSRDGVRAAMIIG-GKVYL 472 (591)
T ss_pred eEEEecCcceEEEeccCCCceEEEEeccCchhhh-----ccCCCcCeEEECCCCCEEEEEEC-CEEEE
Confidence 7666432 233333443332211 12346999999999998887653 44444
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.056 Score=47.78 Aligned_cols=176 Identities=15% Similarity=0.142 Sum_probs=97.5
Q ss_pred CCCCCEEEEEe---------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 128 SIDGQLCATGS---------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 128 s~~~~~l~sg~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
|||+++++... ..+.+.|||+++.. ...+......+....|+|+|+.++-..
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~-------------------~~~l~~~~~~~~~~~~sP~g~~~~~v~ 61 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGE-------------------ITPLTPPPPKLQDAKWSPDGKYIAFVR 61 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTE-------------------EEESS-EETTBSEEEE-SSSTEEEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCc-------------------eEECcCCccccccceeecCCCeeEEEe
Confidence 57777766632 24568889987531 222222356788999999999887765
Q ss_pred CCCcEEEEEcCCCccccceeeecc----------------ccceEEEEEecCCCEEEEEeC-CCEEEEE-----cCCCC-
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQE----------------STFVRCLSFHPCGDYMVVGTD-HFVLRLY-----SSDGR- 255 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~-~~~i~~~-----~~~~~- 255 (344)
++.|.+++..++...+ +...+. -..-..+-|+|+|++|+...- +..+..+ .+.+.
T Consensus 62 -~~nly~~~~~~~~~~~-lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~ 139 (353)
T PF00930_consen 62 -DNNLYLRDLATGQETQ-LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQ 139 (353)
T ss_dssp -TTEEEEESSTTSEEEE-SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTES
T ss_pred -cCceEEEECCCCCeEE-eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCcccc
Confidence 6789999987663322 111110 112255889999999987643 2223222 23322
Q ss_pred --EEE------EEeCCC--cEEEEeCCCCeEEee-ec--ccCCCccEEEEEEccCCCEEEE--EeCCC---cEEEEEcCC
Q psy15157 256 --IYC------SGSKDG--DIKIWDGVSSKCVAT-FS--KAHDGAEISSLTFTRNGKYLLS--SGKDS---LVKLWELSS 317 (344)
Q Consensus 256 --~l~------~~~~dg--~i~iwd~~~~~~~~~-~~--~~~~~~~v~~i~~~~~~~~l~s--~~~dg---~i~vwd~~~ 317 (344)
.+. .|..+. .+.|+|+.+++.... .. .......+..+.|.++++.|+. .+.+. .+.+.|..+
T Consensus 140 yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~t 219 (353)
T PF00930_consen 140 YPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDAST 219 (353)
T ss_dssp S-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECT
T ss_pred CCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCC
Confidence 111 133333 366789988865321 11 0122356999999999984433 33333 367788887
Q ss_pred CeeEEEe
Q psy15157 318 ARCLIAY 324 (344)
Q Consensus 318 ~~~~~~~ 324 (344)
+++-..+
T Consensus 220 g~~~~~~ 226 (353)
T PF00930_consen 220 GETRVVL 226 (353)
T ss_dssp TTCEEEE
T ss_pred CceeEEE
Confidence 7654433
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.02 Score=51.59 Aligned_cols=142 Identities=23% Similarity=0.253 Sum_probs=72.3
Q ss_pred EEEEECCCCCEEE-EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE-EEeCC
Q psy15157 123 RAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA-SGSKD 200 (344)
Q Consensus 123 ~~~~~s~~~~~l~-sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d 200 (344)
..-+|+|||+.|+ +...||...||-++- .+.. ...+..-.+.-+.=.|+|+|+.++ +.+..
T Consensus 241 ~~P~fspDG~~l~f~~~rdg~~~iy~~dl----------------~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~ 303 (425)
T COG0823 241 GAPAFSPDGSKLAFSSSRDGSPDIYLMDL----------------DGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRG 303 (425)
T ss_pred CCccCCCCCCEEEEEECCCCCccEEEEcC----------------CCCc-ceecccCCccccCccCCCCCCEEEEEeCCC
Confidence 3457899998655 455677766554431 0111 112222222223557899999655 44555
Q ss_pred CcEEEE--EcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCc--EEEEeCCCCeE
Q psy15157 201 KTVKMF--DYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGD--IKIWDGVSSKC 276 (344)
Q Consensus 201 g~i~iw--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~--i~iwd~~~~~~ 276 (344)
|.-.|| |++..... .+.. ....-..-.|+|+|++++..+ ..+|. |.+.|..++..
T Consensus 304 G~p~I~~~~~~g~~~~-riT~--~~~~~~~p~~SpdG~~i~~~~------------------~~~g~~~i~~~~~~~~~~ 362 (425)
T COG0823 304 GRPQIYLYDLEGSQVT-RLTF--SGGGNSNPVWSPDGDKIVFES------------------SSGGQWDIDKNDLASGGK 362 (425)
T ss_pred CCcceEEECCCCCcee-Eeec--cCCCCcCccCCCCCCEEEEEe------------------ccCCceeeEEeccCCCCc
Confidence 664444 44443321 1111 111111455667666666432 11233 66777766654
Q ss_pred EeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 277 VATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 277 ~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
.+.+.... ....-.|.++|+.++..+
T Consensus 363 ~~~lt~~~---~~e~ps~~~ng~~i~~~s 388 (425)
T COG0823 363 IRILTSTY---LNESPSWAPNGRMIMFSS 388 (425)
T ss_pred EEEccccc---cCCCCCcCCCCceEEEec
Confidence 44443211 234567888888776544
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0028 Score=50.42 Aligned_cols=118 Identities=19% Similarity=0.290 Sum_probs=72.2
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEE-EEecCCCEEEEEeCCCEEEEEc---------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCL-SFHPCGDYMVVGTDHFVLRLYS--------------------- 251 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~~~~i~~~~--------------------- 251 (344)
+..-+.||.|+-++++..+..... ...+.+. ..-.-+..+++|+.+|.+.+|.
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rs-----e~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~ 107 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRS-----ERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLG 107 (238)
T ss_pred hccccCCcccccchhhhhhhhhhh-----hhhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhcccccceec
Confidence 344466777777776653221100 1111111 1122456788888888888872
Q ss_pred ----CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE--eCCCcEEEEEcCC
Q psy15157 252 ----SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS--GKDSLVKLWELSS 317 (344)
Q Consensus 252 ----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~--~~dg~i~vwd~~~ 317 (344)
.++.+..+++.||.|+.|++.-.+.+.... +|...++.....+..++++... |.|..++.|++..
T Consensus 108 Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g-~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 108 IPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVG-QHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred cccccccceeEEeccCCceeeeccccCceeeeec-cccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 244578899999999999998887765553 4443344555555556666666 6777777777754
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.00023 Score=64.38 Aligned_cols=120 Identities=18% Similarity=0.380 Sum_probs=79.8
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeC----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSV----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
+..+|...+++++|++ |.+.||.|-. |..+.|||+.+..... ........ +-.....+++|-
T Consensus 97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvP-----------ke~~~fs~--~~l~gqns~cwl 163 (783)
T KOG1008|consen 97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVP-----------KESPLFSS--STLDGQNSVCWL 163 (783)
T ss_pred ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCC-----------cccccccc--ccccCccccccc
Confidence 3468899999999998 6678887743 6779999998653210 00000001 123344588898
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~ 250 (344)
.+.+++++|...+.+.++|++..... ... -....+..+..+| .+.|++.-. ++.+.+|
T Consensus 164 rd~klvlaGm~sr~~~ifdlRqs~~~-~~s--vnTk~vqG~tVdp~~~nY~cs~~-dg~iAiw 222 (783)
T KOG1008|consen 164 RDTKLVLAGMTSRSVHIFDLRQSLDS-VSS--VNTKYVQGITVDPFSPNYFCSNS-DGDIAIW 222 (783)
T ss_pred cCcchhhcccccchhhhhhhhhhhhh-hhh--hhhhhcccceecCCCCCceeccc-cCceeec
Confidence 88889999999999999999853211 111 1223456677788 667776555 8999998
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0037 Score=36.83 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=28.5
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcC
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVD 149 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~ 149 (344)
...|.+++|+|..+++|.|+.+|.|.++.++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4579999999999999999999999999984
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.1 Score=50.28 Aligned_cols=69 Identities=10% Similarity=0.262 Sum_probs=49.2
Q ss_pred CcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
.....+|++-..+| +||.|+.+|.||+||-...+.. -.+.+-+.+|..|..+.||+++++.+....+.+
T Consensus 576 ~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AK--T~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi 644 (794)
T PF08553_consen 576 SKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAK--TALPGLGDPIIGIDVTADGKWILATCKTYLLLI 644 (794)
T ss_pred cCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhh--hcCCCCCCCeeEEEecCCCcEEEEeecceEEEE
Confidence 34467788777666 7899999999999994332222 222345688999999999999987665544443
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0082 Score=57.95 Aligned_cols=104 Identities=18% Similarity=0.318 Sum_probs=71.4
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw 269 (344)
.+..++.|+..|.+...|++.. ............+|++++|+.+|..++ .|-.+|.|.+|
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~-------------------~G~~~G~V~v~ 157 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLL-------------------AGLGDGHVTVW 157 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceec-------------------cccCCCcEEEE
Confidence 4557888999999999998764 222233344567899999998655554 77888999999
Q ss_pred eCCCCeEEeeecccC-CCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 270 DGVSSKCVATFSKAH-DGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 270 d~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
|+..++..+.+..+. ....|-.+.+..++..++++..-|. +|.+
T Consensus 158 D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 158 DMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred EccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 999888777665221 1122444455556667888877775 5655
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.1 Score=48.41 Aligned_cols=124 Identities=15% Similarity=0.273 Sum_probs=71.5
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~ 272 (344)
.++.++.+|.+...|..+++.+...... ...++.+| ..++++..+....+.. ....+.....+|.+.-.|..
T Consensus 303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~-----~~~~~~~~--~~vyv~~~~~~~~~~~-~~~~~~~~~~~G~l~AlD~~ 374 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTGKLISARPEV-----EQPMAYDP--GLVYLGAFHIPLGLPP-QKKKRCKKPGKGGLAALDPK 374 (488)
T ss_pred EEEEECCCceEEEEECCCCcEeeEeEee-----ccccccCC--ceEEEccccccccCcc-cccCCCCCCCceEEEEEeCC
Confidence 6778888999999999999766554322 11123344 3333332111000000 00011112345677777888
Q ss_pred CCeEEeeecccCC------CccE--EEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 273 SSKCVATFSKAHD------GAEI--SSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 273 ~~~~~~~~~~~~~------~~~v--~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|+.+-....... +.+. ..+.. .+..|+.++.||.|+.+|..+|+.+-+++-
T Consensus 375 tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 375 TGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 8877665542210 0011 12222 467899999999999999999999988875
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0068 Score=35.70 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=30.1
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
..|..++|+|...+|+.++.+|.|.++.+ +++.+
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 46999999999999999999999999999 66543
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.36 Score=42.71 Aligned_cols=216 Identities=14% Similarity=0.174 Sum_probs=106.5
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCc--CCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQ--NDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
...+....|||+|+.+|-.. ++.|.+++..+............. .....+-.... --+.-..+.|+||++.|+.
T Consensus 42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEE---v~~~~~~~~WSpd~~~la~ 117 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEE---VFDRRSAVWWSPDSKYLAF 117 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHH---TSSSSBSEEE-TTSSEEEE
T ss_pred ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceecccc---ccccccceEECCCCCEEEE
Confidence 56788999999999999885 678999987654222111100000 00000000000 0112245778888887665
Q ss_pred EeCC-Cc-----------------------------------EEEEEcCCCccccceee---eccccceEEEEEecCCCE
Q psy15157 197 GSKD-KT-----------------------------------VKMFDYSKSSVRKAHKT---IQESTFVRCLSFHPCGDY 237 (344)
Q Consensus 197 ~~~d-g~-----------------------------------i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~ 237 (344)
...| .. +.|+|+.+++....... ......+..+.|.+++..
T Consensus 118 ~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~ 197 (353)
T PF00930_consen 118 LRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKR 197 (353)
T ss_dssp EEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEE
T ss_pred EEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcE
Confidence 4332 22 23344444332111101 123455788889888884
Q ss_pred EEEE--eCC-CEEEEE-------------------------------cCCCCEEEEEeCCCc--EEEEeCCCCeEEeeec
Q psy15157 238 MVVG--TDH-FVLRLY-------------------------------SSDGRIYCSGSKDGD--IKIWDGVSSKCVATFS 281 (344)
Q Consensus 238 l~~~--~~~-~~i~~~-------------------------------~~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~ 281 (344)
+++. ..+ ..+.++ ..++.++.....+|. |.+++...+... .+.
T Consensus 198 l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~-~lT 276 (353)
T PF00930_consen 198 LWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR-QLT 276 (353)
T ss_dssp EEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE-ESS
T ss_pred EEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee-ccc
Confidence 4432 111 111111 233445555556665 555566666544 333
Q ss_pred ccCCCccEEE-EEEccCCCEEE-EEeCC----CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 282 KAHDGAEISS-LTFTRNGKYLL-SSGKD----SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 282 ~~~~~~~v~~-i~~~~~~~~l~-s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+. -.|.. +.|+++++.|+ ++..+ ..|+.-++.++..+..+....... ...+++++++
T Consensus 277 ~G~--~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~--~~~~~Spdg~ 340 (353)
T PF00930_consen 277 SGD--WEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDH--YSASFSPDGK 340 (353)
T ss_dssp -SS--S-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTT--EEEEE-TTSS
T ss_pred cCc--eeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCc--eEEEECCCCC
Confidence 222 24644 67888777654 55442 346666776344556666544443 6777777764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0024 Score=60.32 Aligned_cols=184 Identities=14% Similarity=0.243 Sum_probs=108.9
Q ss_pred eEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--
Q psy15157 113 AYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-- 189 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-- 189 (344)
..++|..+.|-.++|.. +-..++ -.-|.+.|||++-. .... ...-.+.........+.-+.|+|
T Consensus 126 ~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l--~G~i---------q~~l~v~~~~p~gs~~~~V~wcp~~ 192 (1283)
T KOG1916|consen 126 ELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVL--QGEI---------QPQLEVTPITPYGSDPQLVSWCPIA 192 (1283)
T ss_pred HHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhh--cccc---------ccceEEeecCcCCCCcceeeecccc
Confidence 44567788898898854 211222 33467899998631 0000 11111222223333445555655
Q ss_pred -CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEE
Q psy15157 190 -SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 190 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i 268 (344)
+.-++..+-.++.|++..+++... ..+ ..|..++..++|-..|-..+.+ .+|||..|++++.||.+++
T Consensus 193 ~~~~~ic~~~~~~~i~lL~~~ra~~-~l~--rsHs~~~~d~a~~~~g~~~l~~--------lSpDGtv~a~a~~dG~v~f 261 (1283)
T KOG1916|consen 193 VNKVYICYGLKGGEIRLLNINRALR-SLF--RSHSQRVTDMAFFAEGVLKLAS--------LSPDGTVFAWAISDGSVGF 261 (1283)
T ss_pred cccceeeeccCCCceeEeeechHHH-HHH--HhcCCCcccHHHHhhchhhhee--------eCCCCcEEEEeecCCccce
Confidence 555777777889999888766432 222 2377778877777666554433 5789999999999999888
Q ss_pred EeCC-----CCeEEeeecccCCCccEEEEEEccCC-------C--EEEEEe-CCCcEEEEEcCCCeeE
Q psy15157 269 WDGV-----SSKCVATFSKAHDGAEISSLTFTRNG-------K--YLLSSG-KDSLVKLWELSSARCL 321 (344)
Q Consensus 269 wd~~-----~~~~~~~~~~~~~~~~v~~i~~~~~~-------~--~l~s~~-~dg~i~vwd~~~~~~~ 321 (344)
|.+. .-+|.+.++ .|++.+-.|.-|+.+- . ++++++ .+..+++|.....+|+
T Consensus 262 ~Qiyi~g~~~~rclhewk-phd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 262 YQIYITGKIVHRCLHEWK-PHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred eeeeeeccccHhhhhccC-CCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 8643 334555555 3433333333244321 2 345554 3456999999888887
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.31 Score=40.82 Aligned_cols=149 Identities=13% Similarity=0.092 Sum_probs=82.6
Q ss_pred ceEEEEECCCCCEEEEEe---CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 121 PCRAGAFSIDGQLCATGS---VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
.+...+++++++.+|... ....+.++.... .....+. ...+..-.|++++...+..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~-------------------~~~~~~~--g~~l~~PS~d~~g~~W~v~ 83 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG-------------------PVRPVLT--GGSLTRPSWDPDGWVWTVD 83 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC-------------------cceeecc--CCccccccccCCCCEEEEE
Confidence 688899999999777655 333455554431 1111112 2267778899998766666
Q ss_pred eCCCcEEEEE-cCCCccccc-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC---
Q psy15157 198 SKDKTVKMFD-YSKSSVRKA-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV--- 272 (344)
Q Consensus 198 ~~dg~i~iwd-~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~--- 272 (344)
..+...+++. ...+..... .........|..+.++|+|..+++-..+ ..++.|.+=-+.
T Consensus 84 ~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~----------------~~~~~v~va~V~r~~ 147 (253)
T PF10647_consen 84 DGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVED----------------GGGGRVYVAGVVRDG 147 (253)
T ss_pred cCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEec----------------CCCCeEEEEEEEeCC
Confidence 6666666663 233322111 1111111279999999999998864421 122333322211
Q ss_pred CC------eEEeeecccCCCccEEEEEEccCCCEEEEEeCCC
Q psy15157 273 SS------KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 273 ~~------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
.+ ....... .....+..+.|.+++.+++.+...+
T Consensus 148 ~g~~~~l~~~~~~~~--~~~~~v~~v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 148 DGVPRRLTGPRRVAP--PLLSDVTDVAWSDDSTLVVLGRSAG 187 (253)
T ss_pred CCCcceeccceEecc--cccCcceeeeecCCCEEEEEeCCCC
Confidence 11 1111111 1123689999999998877665443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0071 Score=58.35 Aligned_cols=79 Identities=19% Similarity=0.295 Sum_probs=60.2
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceee
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 335 (344)
.++.|+..|.+-..|....-. ....+.+..++|++++|+.+|+.++.|-.+|.|.+||+..++.++.+..++.++..+-
T Consensus 101 ~ivi~Ts~ghvl~~d~~~nL~-~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi 179 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGNLG-PLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVI 179 (1206)
T ss_pred eEEEEcCchhhhhhhhhcccc-hhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEE
Confidence 455677777777777665311 1222344456899999999999999999999999999999999999998877765443
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.15 Score=46.33 Aligned_cols=101 Identities=13% Similarity=0.114 Sum_probs=52.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEE-cCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILD-VDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
.+.....+|.+.+ .+|+-...++|.|+. +... ....+.. ...+..+-. |.+|+..
T Consensus 68 ~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~-------------------~~k~i~~-~~~~~~If~---G~LL~~~ 123 (443)
T PF04053_consen 68 FGSGLSFVWSSRN-RYAVLESSSTIKIYKNFKNE-------------------VVKSIKL-PFSVEKIFG---GNLLGVK 123 (443)
T ss_dssp EEE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE--------------------TT------SS-EEEEE----SSSEEEE
T ss_pred cCceeEEEEecCc-cEEEEECCCeEEEEEcCccc-------------------cceEEcC-CcccceEEc---CcEEEEE
Confidence 3566678898855 466666688899963 3210 0001110 012233322 7777766
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEE
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~ 248 (344)
+. +.|.+||+.+++....+.. .+|..+.|+++|.+++..+.+....
T Consensus 124 ~~-~~i~~yDw~~~~~i~~i~v----~~vk~V~Ws~~g~~val~t~~~i~i 169 (443)
T PF04053_consen 124 SS-DFICFYDWETGKLIRRIDV----SAVKYVIWSDDGELVALVTKDSIYI 169 (443)
T ss_dssp ET-TEEEEE-TTT--EEEEESS-----E-EEEEE-TTSSEEEEE-S-SEEE
T ss_pred CC-CCEEEEEhhHcceeeEEec----CCCcEEEEECCCCEEEEEeCCeEEE
Confidence 64 4899999999866554432 2388999999999999887665443
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.19 Score=46.54 Aligned_cols=173 Identities=9% Similarity=0.087 Sum_probs=93.3
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCe--EEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV--TCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
+..++.++.++.|.-.|..++............. .....+ ..+... ++..++.++.+|.|.-+|.
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~------------~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~ 127 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPAD------------RGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDA 127 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCcc------------ccccccccCCcEEc-cCCeEEEecCCCeEEEEEC
Confidence 4456667778999999987765544322111000 000000 011111 2257777888999999999
Q ss_pred CCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC
Q psy15157 209 SKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286 (344)
Q Consensus 209 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 286 (344)
++++....+........-..+.-+| .+..+++++.+ +.+ +.++.++.+.-+|..+|+.+..+......
T Consensus 128 ~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~---------~~~-~~~~~~g~v~alD~~TG~~~W~~~~~~~~ 197 (488)
T cd00216 128 ETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSG---------AEF-FACGVRGALRAYDVETGKLLWRFYTTEPD 197 (488)
T ss_pred CCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccc---------ccc-ccCCCCcEEEEEECCCCceeeEeeccCCC
Confidence 9998765554322210000011111 11233333211 111 11245678888999998877665432110
Q ss_pred ------------------ccE-EEEEEccCCCEEEEEeCCC------------------cEEEEEcCCCeeEEEeec
Q psy15157 287 ------------------AEI-SSLTFTRNGKYLLSSGKDS------------------LVKLWELSSARCLIAYTG 326 (344)
Q Consensus 287 ------------------~~v-~~i~~~~~~~~l~s~~~dg------------------~i~vwd~~~~~~~~~~~~ 326 (344)
..+ .+..+++.+..++.++.++ .|.-+|..+|+.+-.++.
T Consensus 198 ~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~ 274 (488)
T cd00216 198 PNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQT 274 (488)
T ss_pred cCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeC
Confidence 011 1345555566777776665 799999999999988763
|
The alignment model contains an 8-bladed beta-propeller. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.24 Score=41.19 Aligned_cols=165 Identities=13% Similarity=0.163 Sum_probs=94.2
Q ss_pred eEEEEECCC-CCEEEEEeCCCe-EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 122 CRAGAFSID-GQLCATGSVDAS-IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 122 v~~~~~s~~-~~~l~sg~~dg~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
...++|+|. .+-++.+-.-|+ ..++|.+......... ...-+.+.+|. .|||+|.+|...-.
T Consensus 70 ~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~----------s~~~RHfyGHG------vfs~dG~~LYATEn 133 (366)
T COG3490 70 GHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLV----------SQEGRHFYGHG------VFSPDGRLLYATEN 133 (366)
T ss_pred cCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEe----------cccCceeeccc------ccCCCCcEEEeecC
Confidence 345677773 345555655554 5678875432111110 11123455554 58999998887654
Q ss_pred C-----CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCC-CEEEEEeCCCcEEEEeCCC
Q psy15157 200 D-----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG-RIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 200 d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~iwd~~~ 273 (344)
| |.|-|||.+.+ ..+.-....+.-....+.+.+||+.++++.. -|.....-| ..+=.-+..-++.+.|..+
T Consensus 134 dfd~~rGViGvYd~r~~-fqrvgE~~t~GiGpHev~lm~DGrtlvvanG--GIethpdfgR~~lNldsMePSlvlld~at 210 (366)
T COG3490 134 DFDPNRGVIGVYDAREG-FQRVGEFSTHGIGPHEVTLMADGRTLVVANG--GIETHPDFGRTELNLDSMEPSLVLLDAAT 210 (366)
T ss_pred CCCCCCceEEEEecccc-cceecccccCCcCcceeEEecCCcEEEEeCC--ceecccccCccccchhhcCccEEEEeccc
Confidence 4 78999998853 2232333344445567889999999987642 122110011 1122234555677778788
Q ss_pred CeEEeeeccc--CCCccEEEEEEccCCCEEEEEe
Q psy15157 274 SKCVATFSKA--HDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 274 ~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
|+.+.+.... ...-.|..++..+||..++.+-
T Consensus 211 G~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQ 244 (366)
T COG3490 211 GNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQ 244 (366)
T ss_pred cchhhhccCchhhhhcceeeeeeCCCCcEEEEEE
Confidence 8776554322 1223588899998888766553
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.62 Score=45.04 Aligned_cols=86 Identities=19% Similarity=0.243 Sum_probs=54.9
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCc-cccccCCCCCCcCCCCCCceEEEe--------cCCcCCeEEEEEcCC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRM-LAKSSMESSEPQNDQQGHPVIRTL--------YDHIEEVTCLEFHPS 190 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~h~~~v~~~~~~~~ 190 (344)
-.|..+.++++|+++|..|..| |.|-.+... .....+.. .......+++ ..+...|..+.|||.
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~------g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~ 157 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFED------GKKEINCRTVPVDERFFTSNSSLEIKQVRWHPW 157 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccC------CCcceeEEEEEechhhccCCCCceEEEEEEcCC
Confidence 4789999999999999988866 555555321 00000000 0000111111 234568999999996
Q ss_pred ---CCEEEEEeCCCcEEEEEcCCCc
Q psy15157 191 ---APILASGSKDKTVKMFDYSKSS 212 (344)
Q Consensus 191 ---~~~l~s~~~dg~i~iwd~~~~~ 212 (344)
+..|+.-+.|+++|+||+....
T Consensus 158 s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 158 SESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCCCCeEEEEecCCEEEEEecCCCC
Confidence 4688888999999999997643
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.54 Score=39.82 Aligned_cols=63 Identities=21% Similarity=0.275 Sum_probs=42.7
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 129 IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 129 ~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
..++.|+.|..+| +.+++... ........ +...|..+...++-+.|++-+ |+.++++++
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~-----------------~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L 63 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSD-----------------PSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDL 63 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecC-----------------CccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEc
Confidence 3578999999998 88888821 11111111 222399999999887766655 599999998
Q ss_pred CCCc
Q psy15157 209 SKSS 212 (344)
Q Consensus 209 ~~~~ 212 (344)
..-.
T Consensus 64 ~~l~ 67 (275)
T PF00780_consen 64 DSLE 67 (275)
T ss_pred hhhc
Confidence 7643
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.86 Score=41.27 Aligned_cols=103 Identities=12% Similarity=0.119 Sum_probs=59.4
Q ss_pred ceEEEEECCCCCEEEEE-eCCC----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 121 PCRAGAFSIDGQLCATG-SVDA----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg-~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+....+||+|+++|-+ +..| .++++|+.++... ...+... ....+.|.++++.|+
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l-----------------~d~i~~~--~~~~~~W~~d~~~~~ 185 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFL-----------------PDGIENP--KFSSVSWSDDGKGFF 185 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEE-----------------EEEEEEE--ESEEEEECTTSSEEE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCc-----------------CCccccc--ccceEEEeCCCCEEE
Confidence 44467899999988754 4444 4999999753111 1111111 122499999988655
Q ss_pred EEeCCC-----------cEEEEEcCCCccccceeeec-cccc-eEEEEEecCCCEEEEEe
Q psy15157 196 SGSKDK-----------TVKMFDYSKSSVRKAHKTIQ-ESTF-VRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 196 s~~~dg-----------~i~iwd~~~~~~~~~~~~~~-~~~~-v~~~~~~~~~~~l~~~~ 242 (344)
-...+. .|+.|.+.+........... .... ...+..+++++++++..
T Consensus 186 y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~ 245 (414)
T PF02897_consen 186 YTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISS 245 (414)
T ss_dssp EEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEE
T ss_pred EEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEE
Confidence 444332 37788887764331122222 2233 66788999999988654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.6 Score=43.90 Aligned_cols=127 Identities=19% Similarity=0.247 Sum_probs=63.7
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC------CEEEEEc-------
Q psy15157 190 SAPILASGSKD-----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH------FVLRLYS------- 251 (344)
Q Consensus 190 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~~~------- 251 (344)
++.+++.||.+ ..+..||..+.+........ ....-.+++ .-++..++.|+.. ..+..|+
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp-~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~ 419 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLI-FPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWS 419 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcC-cCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeee
Confidence 56677778765 34778888776543221111 111111111 1245555666521 2344442
Q ss_pred ----------------CCCCEEEEEeCCC--------cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 252 ----------------SDGRIYCSGSKDG--------DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 252 ----------------~~~~~l~~~~~dg--------~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
.++.+++.|+.+. .+.+||..+.+....-...........+.+ +++.++.||.+
T Consensus 420 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~ 497 (534)
T PHA03098 420 KGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDK 497 (534)
T ss_pred ecCCCCccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCc
Confidence 2345556665431 378888877654322111111111122223 67777777754
Q ss_pred -----CcEEEEEcCCCee
Q psy15157 308 -----SLVKLWELSSARC 320 (344)
Q Consensus 308 -----g~i~vwd~~~~~~ 320 (344)
+.|.+||..+.+-
T Consensus 498 ~~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 498 YEYYINEIEVYDDKTNTW 515 (534)
T ss_pred CCcccceeEEEeCCCCEE
Confidence 4688999887754
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.69 Score=39.64 Aligned_cols=158 Identities=14% Similarity=0.171 Sum_probs=75.5
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+-.+.+..+..+++|+++++++......-||-.. ..+.+. -+.-...|..+.|.|++.+.+
T Consensus 141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~----------------~~w~~~--~r~~~~riq~~gf~~~~~lw~ 202 (302)
T PF14870_consen 141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQ----------------TTWQPH--NRNSSRRIQSMGFSPDGNLWM 202 (302)
T ss_dssp -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-----------------SS-EEE--E--SSS-EEEEEE-TTS-EEE
T ss_pred cCCcceeEeEEECCCCcEEEEECcccEEEEecCCC----------------ccceEE--ccCccceehhceecCCCCEEE
Confidence 45557788999999999999987766677887531 112222 223457899999999987666
Q ss_pred EEeCCCcEEEEEcCC-Ccc-ccc-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy15157 196 SGSKDKTVKMFDYSK-SSV-RKA-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 196 s~~~dg~i~iwd~~~-~~~-~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~ 272 (344)
.+ ..|.|+.=+... ... ... .........+..++|.+++...++|+ .|.++. |.|+ -+
T Consensus 203 ~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg----------~G~l~~--S~Dg------Gk 263 (302)
T PF14870_consen 203 LA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGG----------SGTLLV--STDG------GK 263 (302)
T ss_dssp EE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEES----------TT-EEE--ESST------TS
T ss_pred Ee-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeC----------CccEEE--eCCC------Cc
Confidence 44 788888877221 111 111 11111233478889988776666554 222222 2221 12
Q ss_pred CCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEE
Q psy15157 273 SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313 (344)
Q Consensus 273 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vw 313 (344)
+.+...... ...+.+..|.|.++.+- +.-+.+|.|.-|
T Consensus 264 tW~~~~~~~--~~~~n~~~i~f~~~~~g-f~lG~~G~ll~~ 301 (302)
T PF14870_consen 264 TWQKDRVGE--NVPSNLYRIVFVNPDKG-FVLGQDGVLLRY 301 (302)
T ss_dssp S-EE-GGGT--TSSS---EEEEEETTEE-EEE-STTEEEEE
T ss_pred cceECcccc--CCCCceEEEEEcCCCce-EEECCCcEEEEe
Confidence 222222221 11234788888866444 445568877655
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=96.16 E-value=1 Score=43.91 Aligned_cols=126 Identities=11% Similarity=0.133 Sum_probs=75.4
Q ss_pred CCcEEEEEcCCCccccceeeecc---------------ccce-EEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQE---------------STFV-RCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKD 263 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~---------------~~~v-~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~d 263 (344)
+|.|+-+|.++++....+..... ...+ ..+++++....++.+..+.....|..+.. ....-..
T Consensus 335 ~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~-~~~n~y~ 413 (764)
T TIGR03074 335 SGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRT-PADEKYS 413 (764)
T ss_pred CcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccc-cCccccc
Confidence 68899999999987655432100 0001 23455666666666554444333321110 1112234
Q ss_pred CcEEEEeCCCCeEEeeecccCCC-------ccEEEEEEcc-CCC---EEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDG-------AEISSLTFTR-NGK---YLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~-------~~v~~i~~~~-~~~---~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+.|.-.|.++|+..-.+...|++ ....-+.+.. +|+ .++.++.+|.+++.|-++|+.+...+.
T Consensus 414 ~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~e 487 (764)
T TIGR03074 414 SSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVEE 487 (764)
T ss_pred ceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeecee
Confidence 66888899999988777643332 1112222332 563 789999999999999999999887654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.27 Score=46.29 Aligned_cols=121 Identities=13% Similarity=0.172 Sum_probs=64.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEEcCCC-CEE
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLYSSDG-RIY 257 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~~~~~-~~l 257 (344)
...-+.-+.-++..+.-+....+.|||.+.+........ .....|.++.|.. +|+.+++.+-.+.|.+|..-. .+.
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~ 109 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYT 109 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhh
Confidence 344444444454444444456799999988764333332 4567799999874 555555444444444443211 000
Q ss_pred EEEeCCCcEEEEeCCCCeEEeeec-ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 258 CSGSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
.. ..+...+..+. ..+...+|.+..|.++|..++.+| +.+.|+|-
T Consensus 110 --~~---------~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 110 --NK---------GPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred --cC---------CcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 00 01111222221 122334688999999997666554 55777764
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.11 Score=46.67 Aligned_cols=131 Identities=15% Similarity=0.224 Sum_probs=80.3
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~ 272 (344)
+|.++.....++--|++.|+.+....... .|.-+.+.|+++.--.. +.+. +.|-.|..|.-||.+
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~---di~mv~~t~d~K~~Ql~----------~e~T--lvGLs~n~vfriDpR 412 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFED---DINMVDITPDFKFAQLT----------SEQT--LVGLSDNSVFRIDPR 412 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccC---CcceeeccCCcchhccc----------cccc--EEeecCCceEEeccc
Confidence 45566667788889999998766655432 26777788865432111 1111 246777888889877
Q ss_pred CCeE-EeeecccC---CCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeee
Q psy15157 273 SSKC-VATFSKAH---DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLT 339 (344)
Q Consensus 273 ~~~~-~~~~~~~~---~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (344)
-... .......+ .+....|.+-..+| ++++||.+|.||+||--.-+....|++-|.....+..+..
T Consensus 413 v~~~~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtad 482 (644)
T KOG2395|consen 413 VQGKNKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTAD 482 (644)
T ss_pred ccCcceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeecc
Confidence 4322 11111111 22235566555454 7899999999999998444455567777777666655543
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.35 Score=43.29 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=76.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc------cee-------eeccccceEEEE----------EecCCCE
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK------AHK-------TIQESTFVRCLS----------FHPCGDY 237 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------~~~-------~~~~~~~v~~~~----------~~~~~~~ 237 (344)
.|+.+.|.++...|+.|...|.|.||.+...+... ... .......+..+. |.| .+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P--~~ 80 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLP--LT 80 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEE--EE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCc--hh
Confidence 58899999999999999999999999876543221 000 000011111111 111 01
Q ss_pred EEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecc------cCCCccEEEEEEcc-----CC---CEEEE
Q psy15157 238 MVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK------AHDGAEISSLTFTR-----NG---KYLLS 303 (344)
Q Consensus 238 l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~v~~i~~~~-----~~---~~l~s 303 (344)
++-......-.+-.++=.+++.|..+|.+.|.|+|....+..-.- ......++++.|.- |+ -.|++
T Consensus 81 l~~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 81 LLDAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp EE---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred heeccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence 111221122222244667888999999999999998887765321 11234588888863 33 46888
Q ss_pred EeCCCcEEEEEcC
Q psy15157 304 SGKDSLVKLWELS 316 (344)
Q Consensus 304 ~~~dg~i~vwd~~ 316 (344)
|...|.+.+|.+-
T Consensus 161 GTn~G~v~~fkIl 173 (395)
T PF08596_consen 161 GTNSGNVLTFKIL 173 (395)
T ss_dssp EETTSEEEEEEEE
T ss_pred EeCCCCEEEEEEe
Confidence 9999999999875
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.24 Score=39.97 Aligned_cols=99 Identities=17% Similarity=0.259 Sum_probs=62.7
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEE--cCCCccccceeee--ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 181 EVTCLEFHPSAP-ILASGSKDKTVKMFD--YSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 181 ~v~~~~~~~~~~-~l~s~~~dg~i~iwd--~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
--+.++|+.+.+ +.++-+.+-+|.-|| ..++......... ....+- =..-|+|..+ +.+|.
T Consensus 159 IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~--e~~~PDGm~I------------D~eG~ 224 (310)
T KOG4499|consen 159 ISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPF--ESLEPDGMTI------------DTEGN 224 (310)
T ss_pred CCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCc--CCCCCCcceE------------ccCCc
Confidence 346788987766 556777788888888 5555332111110 000000 0123455444 23677
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~ 295 (344)
++++.-..++|.-.|..+|+.+.++.... ..|++++|-
T Consensus 225 L~Va~~ng~~V~~~dp~tGK~L~eiklPt--~qitsccFg 262 (310)
T KOG4499|consen 225 LYVATFNGGTVQKVDPTTGKILLEIKLPT--PQITSCCFG 262 (310)
T ss_pred EEEEEecCcEEEEECCCCCcEEEEEEcCC--CceEEEEec
Confidence 77788888999999999999999987553 369999995
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.99 E-value=1.1 Score=39.96 Aligned_cols=169 Identities=11% Similarity=0.051 Sum_probs=82.7
Q ss_pred CceEEEEECCCCCEEEEEe-----------CCC-eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 120 SPCRAGAFSIDGQLCATGS-----------VDA-SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~-----------~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
.....|+|.++|+++++-. ..+ .|.+++-.++. ........+.........+++
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgd--------------G~~d~~~vfa~~l~~p~Gi~~ 79 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGD--------------GKYDKSNVFAEELSMVTGLAV 79 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCC--------------CCcceeEEeecCCCCccceeE
Confidence 4677889999999877643 223 66666532110 001112233333345678999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCC-----ccccceeeec-----cccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEE
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKS-----SVRKAHKTIQ-----ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY 257 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l 257 (344)
.+++ ++++ ......++.|.... +......... +......+.|.|+|.+.++-+..+....-.+...-.
T Consensus 80 ~~~G-lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~ 157 (367)
T TIGR02604 80 AVGG-VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDE 157 (367)
T ss_pred ecCC-EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccC
Confidence 9988 5554 44433334354321 1111111111 123466789999887655433211100000000000
Q ss_pred EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 258 CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
-.....|.|.-+|...++.. .+..... ....++|+++|+++++-..+
T Consensus 158 ~~~~~~g~i~r~~pdg~~~e-~~a~G~r--np~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 158 SRQGLGGGLFRYNPDGGKLR-VVAHGFQ--NPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred cccccCceEEEEecCCCeEE-EEecCcC--CCccceECCCCCEEEEccCC
Confidence 00112356777776655532 3332332 36789999999987765433
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.43 Score=45.04 Aligned_cols=171 Identities=16% Similarity=0.221 Sum_probs=93.2
Q ss_pred CCCCCEEEEEeCCC------eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC-
Q psy15157 128 SIDGQLCATGSVDA------SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD- 200 (344)
Q Consensus 128 s~~~~~l~sg~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d- 200 (344)
+..+.+++.||.++ .+..||..+. .+.....+. ....-.+++.. ++.++++|+.|
T Consensus 282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~----------------~w~~~a~m~-~~r~~~~~~~~-~~~lYv~GG~~~ 343 (571)
T KOG4441|consen 282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTN----------------EWSSLAPMP-SPRCRVGVAVL-NGKLYVVGGYDS 343 (571)
T ss_pred CCCCeEEEECCCCCCCcccceeEEecCCcC----------------cEeecCCCC-cccccccEEEE-CCEEEEEccccC
Confidence 33466777787774 5777777532 122222222 11222344444 45688899988
Q ss_pred -----CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE-----E--------------------
Q psy15157 201 -----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL-----Y-------------------- 250 (344)
Q Consensus 201 -----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~-----~-------------------- 250 (344)
.++..||.++.+.................. -+|...++|+.+|.-.+ |
T Consensus 344 ~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~--l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~ 421 (571)
T KOG4441|consen 344 GSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAV--LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGH 421 (571)
T ss_pred CCcccceEEEecCCCCceeccCCccCccccceeEE--ECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeee
Confidence 457788888876543222221111111111 26778888887765443 3
Q ss_pred ---cCCCCEEEEEeCCC------cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCc-----EEEEEcC
Q psy15157 251 ---SSDGRIYCSGSKDG------DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL-----VKLWELS 316 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~-----i~vwd~~ 316 (344)
.-+|.+.++|+.++ ++..||..+......-.-........ ++.- ++.+.+.||.|+. |..||..
T Consensus 422 gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~~-~~~iYvvGG~~~~~~~~~VE~ydp~ 499 (571)
T KOG4441|consen 422 GVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAVL-NGKIYVVGGFDGTSALSSVERYDPE 499 (571)
T ss_pred EEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EEEE-CCEEEEECCccCCCccceEEEEcCC
Confidence 23567778888554 46788877765433221111111122 2222 6778888887763 6778887
Q ss_pred CCee
Q psy15157 317 SARC 320 (344)
Q Consensus 317 ~~~~ 320 (344)
+.+.
T Consensus 500 ~~~W 503 (571)
T KOG4441|consen 500 TNQW 503 (571)
T ss_pred CCce
Confidence 6553
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.29 Score=44.87 Aligned_cols=129 Identities=13% Similarity=0.127 Sum_probs=73.0
Q ss_pred CcCCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCccccceeeeccccceEEEEEecC----CCEEEEEeCCCEEEEE-
Q psy15157 178 HIEEVTCLEFHPSAPILASGS--KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC----GDYMVVGTDHFVLRLY- 250 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~~i~~~- 250 (344)
--.++..++|....+.+++.- .+|.+++=|- ...+.-..|..+.|.|. ...+++......|.+|
T Consensus 18 AiHPvhGlaWTDGkqVvLT~L~l~~gE~kfGds---------~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWq 88 (671)
T PF15390_consen 18 AIHPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS---------KVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQ 88 (671)
T ss_pred hhccccceEecCCCEEEEEeeeeeCCccccCCc---------cEeeccceeeeeeecCcccCCCCceEEEeccceEEEEE
Confidence 345788999985444555543 2444443331 11222234677888874 2345555556666666
Q ss_pred --------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCC
Q psy15157 251 --------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG 298 (344)
Q Consensus 251 --------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 298 (344)
+|....|+.-.....-.+++++.........-.. .+.|.|.+|.+||
T Consensus 89 L~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~-~G~IhCACWT~DG 167 (671)
T PF15390_consen 89 LCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKT-SGLIHCACWTKDG 167 (671)
T ss_pred eccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccC-CceEEEEEecCcC
Confidence 6666777665555444455554332222222122 2469999999999
Q ss_pred CEEEEEe-CCCcEEEEEcC
Q psy15157 299 KYLLSSG-KDSLVKLWELS 316 (344)
Q Consensus 299 ~~l~s~~-~dg~i~vwd~~ 316 (344)
+.|+++- ..=.-++||-.
T Consensus 168 ~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 168 QRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CEEEEEeCCeEEEEEecCc
Confidence 9987653 33346888854
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.79 Score=39.49 Aligned_cols=115 Identities=16% Similarity=0.223 Sum_probs=65.2
Q ss_pred CceEEEecCCcCCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCC--Cccccc---eeeeccccceEEEEEecCCCEEEEEe
Q psy15157 169 HPVIRTLYDHIEEVTCLEFHPSAPILASG-SKDKTVKMFDYSK--SSVRKA---HKTIQESTFVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 169 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~--~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~ 242 (344)
....+.+..+-..-+.|+||||++.|+.+ +..+.|.-|++.. +..... +....... .|||-.+
T Consensus 152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G-------~PDG~~v---- 220 (307)
T COG3386 152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPG-------LPDGMAV---- 220 (307)
T ss_pred CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCC-------CCCceEE----
Confidence 34445555556667899999999866555 4458888888763 111000 00000111 2233222
Q ss_pred CCCEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEEe
Q psy15157 243 DHFVLRLYSSDGRIYCSGSKDG-DIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSSG 305 (344)
Q Consensus 243 ~~~~i~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~~ 305 (344)
+.+|.+.+++..+| .|.+|+.. ++.+..+..... .+++++|- |+.+.|+..+
T Consensus 221 --------DadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~--~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 221 --------DADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVK--RPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred --------eCCCCEEEecccCCceEEEECCC-CcEEEEEECCCC--CCccceEeCCCcCEEEEEe
Confidence 23556664444444 89999988 888887765432 47778874 4456655544
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=95.87 E-value=1.4 Score=42.14 Aligned_cols=160 Identities=11% Similarity=0.140 Sum_probs=82.5
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccC------CCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--CCCEEEEEeCCCc
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSM------ESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--SAPILASGSKDKT 202 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~ 202 (344)
.+++++|. .+.|.||+.+........ ........... ....+.. ....|+.|.... +...|+.|..||.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D-~~~s~~p-~PHtIN~i~v~~lg~~EVLl~c~DdG~ 125 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPD-RLISTWP-FPHTINFIKVGDLGGEEVLLLCTDDGD 125 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCcccccccc-ccccCCC-CCceeeEEEecccCCeeEEEEEecCCe
Confidence 66777764 788999998653221100 00000000000 0111111 223456665544 4458999999999
Q ss_pred EEEEEcCCCc-----------------cccceeeeccccceEEEEEe--cCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC
Q psy15157 203 VKMFDYSKSS-----------------VRKAHKTIQESTFVRCLSFH--PCGDYMVVGTDHFVLRLYSSDGRIYCSGSKD 263 (344)
Q Consensus 203 i~iwd~~~~~-----------------~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~d 263 (344)
|.+|.+.+-- .....-.......++.++++ ...++||++ +..
T Consensus 126 V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVS-------------------sNs 186 (717)
T PF08728_consen 126 VLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVS-------------------SNS 186 (717)
T ss_pred EEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEe-------------------cCC
Confidence 9999753210 00011112233456777777 555555544 444
Q ss_pred CcEEEEeCCC--CeEEe--eecccCCCccEEEEEEccCC---C---EEEEEeCCCcEEEEEc
Q psy15157 264 GDIKIWDGVS--SKCVA--TFSKAHDGAEISSLTFTRNG---K---YLLSSGKDSLVKLWEL 315 (344)
Q Consensus 264 g~i~iwd~~~--~~~~~--~~~~~~~~~~v~~i~~~~~~---~---~l~s~~~dg~i~vwd~ 315 (344)
..|.||-... .+... ..... ..|.+|+|.++. . +|++++-.|.+.+|++
T Consensus 187 ~~VTVFaf~l~~~r~~~~~s~~~~---hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 187 QEVTVFAFALVDERFYHVPSHQHS---HNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ceEEEEEEeccccccccccccccc---cCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 4454443322 11111 11112 248889987643 2 7888899999999888
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.84 Score=38.30 Aligned_cols=141 Identities=13% Similarity=0.138 Sum_probs=86.7
Q ss_pred cCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE------
Q psy15157 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL------ 249 (344)
Q Consensus 176 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~------ 249 (344)
.+-...+.++.|+|+.+.|++......-.+|=-..|+....+...+- .....+.+..+|.+.++--.++.+.+
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-SDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-CChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 34455699999999999888888888777776667776666554332 22344566666666655555555444
Q ss_pred ---------------------------EcCCCCEEEEEeCCCcEEEEeCCCCeEEee--ecccCC------CccEEEEEE
Q psy15157 250 ---------------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVAT--FSKAHD------GAEISSLTF 294 (344)
Q Consensus 250 ---------------------------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~------~~~v~~i~~ 294 (344)
|++..+.|+.+-+-.-+.||....+..... ....+. -..|.++.|
T Consensus 161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~ 240 (316)
T COG3204 161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEF 240 (316)
T ss_pred ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecccccee
Confidence 366667777766666666666543321111 100110 123778888
Q ss_pred cc-CCCEEEEEeCCCcEEEEEcCC
Q psy15157 295 TR-NGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 295 ~~-~~~~l~s~~~dg~i~vwd~~~ 317 (344)
++ .+..|+-+.+++.+.-.|...
T Consensus 241 ~~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 241 NAITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred cCCCCcEEEEecCCceEEEEecCC
Confidence 87 455666677778777777743
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.027 Score=44.96 Aligned_cols=107 Identities=13% Similarity=0.176 Sum_probs=60.0
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEE-EEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC-LEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
+.-+++|+.+|.|.+|..+-. +.....+..-...|.+ +.--.++.+..+++.||.|+.|++.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~-----------------g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~ 132 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLE-----------------GAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIK 132 (238)
T ss_pred CceEEeecccceEEEecCCcc-----------------chHHHhhhcccccceeccccccccceeEEeccCCceeeeccc
Confidence 457889999999999988621 1111111111222222 2233355688899999999999986
Q ss_pred CCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEE--eCCCcEEEEeCCCC
Q psy15157 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSG--SKDGDIKIWDGVSS 274 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~--~~dg~i~iwd~~~~ 274 (344)
-.+..... .+|. +- ++..+++.+. ++.+++. |.|..++.|++..-
T Consensus 133 p~k~~g~~--g~h~-------~~-~~e~~ivv~s----------d~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 133 PNKVLGYV--GQHN-------FE-SGEELIVVGS----------DEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cCceeeee--cccc-------CC-CcceeEEecC----------CceEEeeccccchhhhhcchhhh
Confidence 55332111 1122 22 3344444332 3444455 77788888887653
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.22 Score=48.04 Aligned_cols=91 Identities=15% Similarity=0.163 Sum_probs=56.4
Q ss_pred ccceEEEEEecCCCEEEEEeCCCEEEEEcCCC--CE-EEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccC-
Q psy15157 223 STFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG--RI-YCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN- 297 (344)
Q Consensus 223 ~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~--~~-l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~- 297 (344)
...|..+.++|+|.+++..+..+.+.+.=|.. .. .+-++.+ -..+.+.+... .+. .+....|..+.|+|.
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~----~~~-~~~~~~i~qv~WhP~s 158 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDER----FFT-SNSSLEIKQVRWHPWS 158 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechh----hcc-CCCCceEEEEEEcCCC
Confidence 34578889999999999888887776653321 00 0011111 11222222111 111 222357999999996
Q ss_pred --CCEEEEEeCCCcEEEEEcCCC
Q psy15157 298 --GKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 298 --~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+..|+.-..|+++|+||+...
T Consensus 159 ~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 159 ESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCCCeEEEEecCCEEEEEecCCC
Confidence 578999999999999999764
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.62 E-value=1.8 Score=39.92 Aligned_cols=123 Identities=11% Similarity=0.075 Sum_probs=71.0
Q ss_pred ecCCCceEEEEECCCC----CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCC--eEEEEEc
Q psy15157 116 TSHKSPCRAGAFSIDG----QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEE--VTCLEFH 188 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~----~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~--v~~~~~~ 188 (344)
-|.-..|..+.|.|-+ .-+++......|.||.+-.-... ....-.-++..- ..-+ -..+.||
T Consensus 53 iGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e-----------~~K~l~sQtcEi~e~~pvLpQGCVWH 121 (671)
T PF15390_consen 53 IGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTE-----------RNKLLMSQTCEIREPFPVLPQGCVWH 121 (671)
T ss_pred eeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccc-----------cccceeeeeeeccCCcccCCCccccc
Confidence 4666789999999842 24444556788999998411000 000000111100 0011 2357899
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-CEEEEE
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-FVLRLY 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~~ 250 (344)
|....|+.-.....-.+++++......... ....+.|.|.+|.+||..++++-.. -.-++|
T Consensus 122 Pk~~iL~VLT~~dvSV~~sV~~d~srVkaD-i~~~G~IhCACWT~DG~RLVVAvGSsLHSyiW 183 (671)
T PF15390_consen 122 PKKAILTVLTARDVSVLPSVHCDSSRVKAD-IKTSGLIHCACWTKDGQRLVVAVGSSLHSYIW 183 (671)
T ss_pred CCCceEEEEecCceeEeeeeeeCCceEEEe-ccCCceEEEEEecCcCCEEEEEeCCeEEEEEe
Confidence 999888766655555566766543322222 3456789999999999999887544 233445
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.95 Score=41.91 Aligned_cols=124 Identities=9% Similarity=0.064 Sum_probs=60.9
Q ss_pred CCCEEEEEeCC--CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC---EEEEEcC------------
Q psy15157 190 SAPILASGSKD--KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF---VLRLYSS------------ 252 (344)
Q Consensus 190 ~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~i~~~~~------------ 252 (344)
++.+.+.|+.+ .++..||..+++................+ .-+|+..++|+.++ .+..|+|
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~--~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~ 395 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVA--SINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTY 395 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEE--EECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCC
Confidence 56677777764 45788887665432222111111111111 22566666666443 3444533
Q ss_pred -----------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcC
Q psy15157 253 -----------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELS 316 (344)
Q Consensus 253 -----------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~ 316 (344)
+|++++.| |.+.+||..+.+....-...........+.+ +|+..+.||.+ ..|..||..
T Consensus 396 ~~r~~~~~~~~~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r~~~~~~v~--~~~IYviGG~~~~~~~~~ve~Yd~~ 470 (480)
T PHA02790 396 YPHYKSCALVFGRRLFLVG---RNAEFYCESSNTWTLIDDPIYPRDNPELIIV--DNKLLLIGGFYRGSYIDTIEVYNNR 470 (480)
T ss_pred CccccceEEEECCEEEEEC---CceEEecCCCCcEeEcCCCCCCccccEEEEE--CCEEEEECCcCCCcccceEEEEECC
Confidence 33444444 3466778776654322111111111222222 67788888754 346777776
Q ss_pred CCee
Q psy15157 317 SARC 320 (344)
Q Consensus 317 ~~~~ 320 (344)
+++-
T Consensus 471 ~~~W 474 (480)
T PHA02790 471 TYSW 474 (480)
T ss_pred CCeE
Confidence 6653
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.18 Score=49.62 Aligned_cols=156 Identities=10% Similarity=0.100 Sum_probs=86.5
Q ss_pred CceEEEEECCCCCEEEE--EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEE
Q psy15157 120 SPCRAGAFSIDGQLCAT--GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILAS 196 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~s--g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 196 (344)
-++..+...+|+...++ .+.+-.|..||+++........ .......++.........++.|+|.-. ..+.
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~-------~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av 173 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYET-------TVPLKNSATSFEKPVFQLKNVWNPLVPLNSAV 173 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhh-------ccccccccchhccccccccccccCCccchhhh
Confidence 45666666777664443 3444579999997543222110 000111112223334567889999654 5667
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC 276 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 276 (344)
+..|+.|++.-+..... ......-....+|++|+|.|+.+++|. ..|++.-|... ++.
T Consensus 174 ~l~dlsl~V~~~~~~~~--~v~s~p~t~~~Tav~WSprGKQl~iG~-------------------nnGt~vQy~P~-lei 231 (1405)
T KOG3630|consen 174 DLSDLSLRVKSTKQLAQ--NVTSFPVTNSQTAVLWSPRGKQLFIGR-------------------NNGTEVQYEPS-LEI 231 (1405)
T ss_pred hccccchhhhhhhhhhh--hhcccCcccceeeEEeccccceeeEec-------------------CCCeEEEeecc-cce
Confidence 78899999887654321 112123455688999999777777554 44555444422 222
Q ss_pred Eeeecc--cCCCccEEEEEEccCCCEEEEE
Q psy15157 277 VATFSK--AHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 277 ~~~~~~--~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
...+.. ......|.+|+|.....++++-
T Consensus 232 k~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy 261 (1405)
T KOG3630|consen 232 KSEIPEPPVEENYRVLSVTWLSTQEFLVVY 261 (1405)
T ss_pred eecccCCCcCCCcceeEEEEecceeEEEEe
Confidence 222211 1113568999998777776653
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.75 Score=43.55 Aligned_cols=122 Identities=15% Similarity=0.020 Sum_probs=71.7
Q ss_pred CCeEEEEEcCCCCEEEEEe------CCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc
Q psy15157 180 EEVTCLEFHPSAPILASGS------KDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS 251 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~------~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~ 251 (344)
..+.+.+++|+|+.++... .|. .|.+++... . ...+. .....+.-.|+|+|..+++......+.
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~-~~~lt---~g~~~t~PsWspDG~~lw~v~dg~~~~--- 421 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-V-AVQVL---EGHSLTRPSWSLDADAVWVVVDGNTVV--- 421 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-c-ceeee---cCCCCCCceECCCCCceEEEecCcceE---
Confidence 4678889999999766544 244 444445422 1 12221 122367789999998888765321111
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEE---EEcCCCe
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL---WELSSAR 319 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v---wd~~~~~ 319 (344)
++......+.+.+.++..++.... . ...|..+.|+|||..++... +|.|++ -....|.
T Consensus 422 ----~v~~~~~~gql~~~~vd~ge~~~~----~-~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~ 482 (591)
T PRK13616 422 ----RVIRDPATGQLARTPVDASAVASR----V-PGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ 482 (591)
T ss_pred ----EEeccCCCceEEEEeccCchhhhc----c-CCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc
Confidence 111122345676667776654331 1 23599999999999987765 466766 4434443
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=95.22 E-value=2.7 Score=39.38 Aligned_cols=171 Identities=14% Similarity=0.133 Sum_probs=92.7
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe------CCCcEE
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS------KDKTVK 204 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------~dg~i~ 204 (344)
+..++.++.|+.|.-.|..++........... . ....+++--.--++ .++.++ .+|.|.
T Consensus 120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~-------------~-~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~ 184 (527)
T TIGR03075 120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDY-------------K-AGYTITAAPLVVKG-KVITGISGGEFGVRGYVT 184 (527)
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeecccccc-------------c-ccccccCCcEEECC-EEEEeecccccCCCcEEE
Confidence 34566777889898888877654433211000 0 00011110000133 344433 268899
Q ss_pred EEEcCCCccccceeeeccc-----------------------------cce-EEEEEecCCCEEEEEeCCCEEEEEcCCC
Q psy15157 205 MFDYSKSSVRKAHKTIQES-----------------------------TFV-RCLSFHPCGDYMVVGTDHFVLRLYSSDG 254 (344)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~-----------------------------~~v-~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 254 (344)
-+|.++++....+...... ..+ ..+.++|...++++++.+..- |....
T Consensus 185 AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p--~~~~~ 262 (527)
T TIGR03075 185 AYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSP--WNSHL 262 (527)
T ss_pred EEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCC--CCCCC
Confidence 9999888765443332111 011 123556666666666544322 21111
Q ss_pred ---CEEEEEeCCCcEEEEeCCCCeEEeeecccCCC-------ccEEEEEEccCCC---EEEEEeCCCcEEEEEcCCCeeE
Q psy15157 255 ---RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG-------AEISSLTFTRNGK---YLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 255 ---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~v~~i~~~~~~~---~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
.-+.+ ..|.-.|+++|+..-.+...+++ ....-+.+..+|+ .++.++.+|.+++.|-++|+.+
T Consensus 263 r~gdnl~~----~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 263 RPGDNLYT----SSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred CCCCCccc----eeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 11111 25777899999988776643332 1122233334676 7889999999999999999987
Q ss_pred E
Q psy15157 322 I 322 (344)
Q Consensus 322 ~ 322 (344)
.
T Consensus 339 ~ 339 (527)
T TIGR03075 339 S 339 (527)
T ss_pred c
Confidence 4
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.084 Score=30.16 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=26.1
Q ss_pred CceEEEEECCC-C--CEEEEEeCCCeEEEEEcCC
Q psy15157 120 SPCRAGAFSID-G--QLCATGSVDASIKILDVDR 150 (344)
Q Consensus 120 ~~v~~~~~s~~-~--~~l~sg~~dg~v~iwd~~~ 150 (344)
+.|+++.|||. + ++|+.+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 47999999984 4 5888888889999999973
|
It contains a characteristic DLL sequence motif. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=95.20 E-value=2 Score=37.66 Aligned_cols=27 Identities=30% Similarity=0.327 Sum_probs=22.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEc
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDV 148 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~ 148 (344)
..+.|+|.|||+++++ ...|.|++++.
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~~ 29 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVDK 29 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEET
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEeC
Confidence 4688999999988776 56999999993
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.06 E-value=1.6 Score=39.52 Aligned_cols=126 Identities=17% Similarity=0.186 Sum_probs=70.9
Q ss_pred eEEEEEcCCCCEEEE-EeCCCc----EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCE
Q psy15157 182 VTCLEFHPSAPILAS-GSKDKT----VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRI 256 (344)
Q Consensus 182 v~~~~~~~~~~~l~s-~~~dg~----i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~ 256 (344)
+....++|++++++- -+..|. ++++|+.+++..... ... .....+.|.++++.|+....+. ....
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~--i~~-~~~~~~~W~~d~~~~~y~~~~~-------~~~~ 195 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDG--IEN-PKFSSVSWSDDGKGFFYTRFDE-------DQRT 195 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEE--EEE-EESEEEEECTTSSEEEEEECST-------TTSS
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCc--ccc-cccceEEEeCCCCEEEEEEeCc-------cccc
Confidence 446788999997664 344444 999999998543211 111 1123389999887776543221 0000
Q ss_pred EEEEeCCCcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCCCEEEEEe---CC-CcEEEEEcCCC
Q psy15157 257 YCSGSKDGDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNGKYLLSSG---KD-SLVKLWELSSA 318 (344)
Q Consensus 257 l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~---~d-g~i~vwd~~~~ 318 (344)
- .......|+.|.+.+... ...+...........+..++|+++|+..+ .+ ..+++.|+..+
T Consensus 196 ~-~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 196 S-DSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp --CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred c-cCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 0 112244588888776532 23333222221266788999999977543 22 45788888774
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.46 Score=38.74 Aligned_cols=71 Identities=14% Similarity=0.180 Sum_probs=51.8
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeee------ccc------CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATF------SKA------HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~------~~~------~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
++.++++-+.+|.+++||+.+++.+..- ... .....|..+.++.+|.-|++-+ +|..+.|+..-+.-
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~~W 99 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLGCW 99 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccccee
Confidence 5666778889999999999998765432 111 1234689999999998887766 58899999877665
Q ss_pred EEEe
Q psy15157 321 LIAY 324 (344)
Q Consensus 321 ~~~~ 324 (344)
+..-
T Consensus 100 ~~vs 103 (219)
T PF07569_consen 100 IRVS 103 (219)
T ss_pred EEec
Confidence 5543
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.44 Score=43.09 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=59.1
Q ss_pred ceEEEEEecCCCEEEEEeCCCEEEEE-----cCCCCEEEEEeCCCc----EEEEeCCCCeEEeeecccCCCccEEEEEEc
Q psy15157 225 FVRCLSFHPCGDYMVVGTDHFVLRLY-----SSDGRIYCSGSKDGD----IKIWDGVSSKCVATFSKAHDGAEISSLTFT 295 (344)
Q Consensus 225 ~v~~~~~~~~~~~l~~~~~~~~i~~~-----~~~~~~l~~~~~dg~----i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~ 295 (344)
.|..+..++.|..++..+.+|.+.++ .+++.+ .||. .|.+.+.+ .+.+-. .+ -.+..++|+
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~-----eDgk~~v~CRt~~i~~--~~ftss-~~--ltl~Qa~WH 174 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEF-----EDGKSTVNCRTTPVAE--RFFTSS-TS--LTLKQAAWH 174 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCcccee-----cCCCceEEEEeecccc--eeeccC-Cc--eeeeecccc
Confidence 46778888899999888888887764 333322 3331 22332222 122111 12 247888999
Q ss_pred cCC---CEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 296 RNG---KYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 296 ~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
|+. ..|..-+.|..||+||+...+.+.-..|
T Consensus 175 P~S~~D~hL~iL~sdnviRiy~lS~~telylqpg 208 (741)
T KOG4460|consen 175 PSSILDPHLVLLTSDNVIRIYSLSEPTELYLQPG 208 (741)
T ss_pred CCccCCceEEEEecCcEEEEEecCCcchhhccCC
Confidence 975 5677778899999999988877744433
|
|
| >PF08513 LisH: LisH; InterPro: IPR013720 The LisH motif is found in a large number of eukaryotic proteins, from metazoa, fungi and plants that have a wide range of functions | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.076 Score=27.06 Aligned_cols=26 Identities=27% Similarity=0.298 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhhCCcHHHHHHHHhh
Q psy15157 18 EALYRLIISQLYYDGHHPMAITLQSS 43 (344)
Q Consensus 18 ~~l~~~~~~~l~~~~~~~~a~~~~~~ 43 (344)
.+|+.+|+++|...|+..+|.++..|
T Consensus 1 ~~Ln~lI~~YL~~~Gy~~tA~~f~~E 26 (27)
T PF08513_consen 1 EELNQLIYDYLVENGYKETAKAFAKE 26 (27)
T ss_dssp HHHHHHHHHHHHHCT-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCcHHHHHHHHhc
Confidence 46899999999999999999999876
|
The recently solved structure of the LisH domain in the N-terminal region of LIS1 depicted it as a novel dimerization motif, and that other structural elements are likely to play an important role in dimerisation [, , ]. The LisH (lis homology) domain mediates protein dimerisation and tetramerisation. The LisH domain is found in Sif2, a component of the Set3 complex which is responsible for repressing meiotic genes. It has been shown that the LisH domain helps mediate interaction with components of the Set3 complex []. ; PDB: 2XTE_L 2XTC_B 2XTD_A 1UUJ_B. |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.82 E-value=2.1 Score=36.03 Aligned_cols=117 Identities=9% Similarity=0.152 Sum_probs=76.4
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCCEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l 194 (344)
.|-...|.++.|+|+.+.|++......-.||=..+ +..++++.- .-.....+.+..++++.
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~------------------GdlirtiPL~g~~DpE~Ieyig~n~fv 143 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKE------------------GDLIRTIPLTGFSDPETIEYIGGNQFV 143 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecC------------------CceEEEecccccCChhHeEEecCCEEE
Confidence 34555699999999999887777777666665432 334444321 12234567777788777
Q ss_pred EEEeCCCcEEEEEcCCCccccce-----e---eeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAH-----K---TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~-----~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
++-=.++.+.++.+......... . ....+.....++|+|....++++-...-+.+|
T Consensus 144 i~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~ 207 (316)
T COG3204 144 IVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIF 207 (316)
T ss_pred EEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEE
Confidence 77777888888877655211111 1 11125567789999999988888777766666
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=94.82 E-value=1.9 Score=35.91 Aligned_cols=118 Identities=18% Similarity=0.184 Sum_probs=74.6
Q ss_pred eEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEE
Q psy15157 182 VTCLEFHPSAPILASGSKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCS 259 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~ 259 (344)
.-.+.|..++.++-|.+.-| .|+.+|+.+++......... ...-..++... ++++..
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~-~~FgEGit~~~--------------------d~l~qL 105 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPP-RYFGEGITILG--------------------DKLYQL 105 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TT-T--EEEEEEET--------------------TEEEEE
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCc-cccceeEEEEC--------------------CEEEEE
Confidence 45677877888888888777 69999999987654443322 22222233321 222223
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
-=.++...+||..+.+.+.++.-..+ =..++ .|++.|+.+.....|+++|..+-+...++.
T Consensus 106 TWk~~~~f~yd~~tl~~~~~~~y~~E---GWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~ 166 (264)
T PF05096_consen 106 TWKEGTGFVYDPNTLKKIGTFPYPGE---GWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQ 166 (264)
T ss_dssp ESSSSEEEEEETTTTEEEEEEE-SSS-----EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE
T ss_pred EecCCeEEEEccccceEEEEEecCCc---ceEEE--cCCCEEEEECCccceEEECCcccceEEEEE
Confidence 45678899999999998888864333 35666 367777777778889999998877766654
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.83 Score=45.27 Aligned_cols=191 Identities=14% Similarity=0.059 Sum_probs=103.3
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCC-CCcCCCCCCceEEEecCC-cCCeEEEEEcCCCCE--EEEEeC
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS-EPQNDQQGHPVIRTLYDH-IEEVTCLEFHPSAPI--LASGSK 199 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~--l~s~~~ 199 (344)
.++.++...+++.++..+.+.|+-..+.+........ ....+ .....++.-| .-.+..+...+|+.. ++..+.
T Consensus 46 ~la~sn~ysl~Fa~~nsk~L~vfgtknlLi~~it~D~~n~~Vd---~~~~~t~~v~k~~pi~~~v~~~D~t~s~v~~tsn 122 (1405)
T KOG3630|consen 46 NLAISNSYSLFFAASNSKSLAVFGTKNLLIDHITSDSTNSLVD---ADENLTFKVEKEIPIVIFVCFHDATDSVVVSTSN 122 (1405)
T ss_pred hhhcccccceEEEecCCcceeeeccccceeecccccccccccc---cccccceeeeccccceEEEeccCCceEEEEEecC
Confidence 3455665556666667777777776554332221110 00000 0111222223 234555666667653 334444
Q ss_pred CCcEEEEEcCCCccccc-----e----eeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy15157 200 DKTVKMFDYSKSSVRKA-----H----KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~-----~----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd 270 (344)
+-.|..||+++-..-.. + ..........++.|+|.-. ...+.+..|+.|++.-
T Consensus 123 g~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp------------------~n~av~l~dlsl~V~~ 184 (1405)
T KOG3630|consen 123 GEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVP------------------LNSAVDLSDLSLRVKS 184 (1405)
T ss_pred CceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCcc------------------chhhhhccccchhhhh
Confidence 55789999876432110 0 0111233455667776321 1223566788888877
Q ss_pred CCCCeEE-eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC--CcCceeeeeee
Q psy15157 271 GVSSKCV-ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG--SMGQQFELTLT 339 (344)
Q Consensus 271 ~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~ 339 (344)
+...... ..+. -....++++|+|.|+.++.|-..|++.-|.. +++....+.+.. ...+..+++|-
T Consensus 185 ~~~~~~~v~s~p---~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~v~Wl 252 (1405)
T KOG3630|consen 185 TKQLAQNVTSFP---VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLSVTWL 252 (1405)
T ss_pred hhhhhhhhcccC---cccceeeEEeccccceeeEecCCCeEEEeec-ccceeecccCCCcCCCcceeEEEEe
Confidence 6543222 2222 2245899999999999999999999998875 555555555432 23455555543
|
|
| >PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins | Back alignment and domain information |
|---|
Probab=94.71 E-value=1.9 Score=39.24 Aligned_cols=30 Identities=17% Similarity=0.469 Sum_probs=25.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
.|.+++..+..+.|++.+.+|.|.+|++..
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 499999999999999999999999999975
|
RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A. |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.63 Score=44.39 Aligned_cols=136 Identities=12% Similarity=0.067 Sum_probs=78.6
Q ss_pred ceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCC--CCCcCCCCCCceEEEecCCcCCeEEEEEc--CCCCEE
Q psy15157 121 PCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMES--SEPQNDQQGHPVIRTLYDHIEEVTCLEFH--PSAPIL 194 (344)
Q Consensus 121 ~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l 194 (344)
.|+-|.... +...|+.+.+||.|.+|.+++......... .........-++...+. -...+++++++ ...++|
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence 566666654 456899999999999999865321111100 00000001111122222 34478999999 778899
Q ss_pred EEEeCCCcEEEEEcCCCcccc-ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC-EEEEEeCCCcEEEEeC
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRK-AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR-IYCSGSKDGDIKIWDG 271 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~l~~~~~dg~i~iwd~ 271 (344)
|.++....|.||-+....... ......+...|.+++|-++.. ++.|. .+++++-.|.+.+|++
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~--------------d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDL--------------DPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCC--------------CCccceEEEEEeccCcEEEEEE
Confidence 999988889988765521111 111223556688899987532 11222 4556777777777665
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.14 Score=29.22 Aligned_cols=31 Identities=13% Similarity=0.172 Sum_probs=25.9
Q ss_pred cEEEEEEccCC---CEEEEEeCCCcEEEEEcCCC
Q psy15157 288 EISSLTFTRNG---KYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 288 ~v~~i~~~~~~---~~l~s~~~dg~i~vwd~~~~ 318 (344)
.|.++.|+|+. .+|+-+-.-|.|.|+|++++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 48899999854 48888888899999999963
|
It contains a characteristic DLL sequence motif. |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=94.64 E-value=2 Score=34.92 Aligned_cols=106 Identities=14% Similarity=0.171 Sum_probs=64.9
Q ss_pred ccceEEEEEecCCCEEEEEe---------CCCEEEEE---------------------cCCCC-EEEEEeCCCcEEEEe-
Q psy15157 223 STFVRCLSFHPCGDYMVVGT---------DHFVLRLY---------------------SSDGR-IYCSGSKDGDIKIWD- 270 (344)
Q Consensus 223 ~~~v~~~~~~~~~~~l~~~~---------~~~~i~~~---------------------~~~~~-~l~~~~~dg~i~iwd- 270 (344)
....+.-..+|+|++++-.. ..+.++.| +.+.+ +.++-+.+-.|.-||
T Consensus 108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dy 187 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDY 187 (310)
T ss_pred hcccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeeec
Confidence 34456667788998844221 13444444 33333 445556666777777
Q ss_pred -CCCCe-----EEeeeccc--CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 271 -GVSSK-----CVATFSKA--HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 271 -~~~~~-----~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
..+|. .+..++.. .+.-..-.++.+.+|++.+++=..++|...|..+|+.+.+++-+.
T Consensus 188 d~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt 253 (310)
T KOG4499|consen 188 DCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPT 253 (310)
T ss_pred CCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCC
Confidence 44442 23333221 011113345567789988888888999999999999999998773
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=94.57 E-value=5.2 Score=39.40 Aligned_cols=77 Identities=17% Similarity=0.004 Sum_probs=44.8
Q ss_pred CCceEEEEECCCC------CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec--CCcCCeEEEEEcCC
Q psy15157 119 KSPCRAGAFSIDG------QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY--DHIEEVTCLEFHPS 190 (344)
Q Consensus 119 ~~~v~~~~~s~~~------~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~ 190 (344)
...|-|+.++|-| ++++.|.++..+.+--........ ....+. .-...|.-..+-.+
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~---------------~~~~l~~~~iPRSIl~~~~e~d 594 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILI---------------THEQLSGEIIPRSILLTTFEGD 594 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCccee---------------eeeccCCCccchheeeEEeecc
Confidence 4689999999742 278888887766654432110000 000011 11223445556556
Q ss_pred CCEEEEEeCCCcEEEEEcCC
Q psy15157 191 APILASGSKDKTVKMFDYSK 210 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~ 210 (344)
..+|.++..||.+.-+-+..
T Consensus 595 ~~yLlvalgdG~l~~fv~d~ 614 (1096)
T KOG1897|consen 595 IHYLLVALGDGALLYFVLDI 614 (1096)
T ss_pred ceEEEEEcCCceEEEEEEEc
Confidence 77999999999988665443
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=94.50 E-value=1.7 Score=41.15 Aligned_cols=104 Identities=10% Similarity=0.032 Sum_probs=61.6
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc--CCCCEEEEE
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH--PSAPILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~ 197 (344)
..+.-+.-|.-++..++-+....+.|||...... +....+ ...+.|.++.|. |+++.+++.
T Consensus 30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~l----------------E~~~~f-~~~~~I~dLDWtst~d~qsiLaV 92 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVL----------------EYEESF-SEDDPIRDLDWTSTPDGQSILAV 92 (631)
T ss_pred CCcceEeecccCcEEEEECCCCEEEEEEcCCcEE----------------EEeeee-cCCCceeeceeeecCCCCEEEEE
Confidence 3444455555555555555556799999974321 111222 457789999995 588889999
Q ss_pred eCCCcEEEEEcCCC---------ccccceeeecc-ccceEEEEEecCCCEEEE
Q psy15157 198 SKDKTVKMFDYSKS---------SVRKAHKTIQE-STFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 198 ~~dg~i~iwd~~~~---------~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~ 240 (344)
+....|.++.-... ..++.+....+ ..+|.+..|.++|..++.
T Consensus 93 Gf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~ 145 (631)
T PF12234_consen 93 GFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVG 145 (631)
T ss_pred EcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEE
Confidence 99999999864211 01122222222 245677777776665543
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=94.20 E-value=2.2 Score=38.04 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=31.9
Q ss_pred CCeEEEEEcCCCCEEEEEe-----------CCC-cEEEEEcCCC--ccccceeeeccccceEEEEEecCC
Q psy15157 180 EEVTCLEFHPSAPILASGS-----------KDK-TVKMFDYSKS--SVRKAHKTIQESTFVRCLSFHPCG 235 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~-----------~dg-~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~ 235 (344)
.....|+|.++|+++++-. ..+ .|.+++-.++ +..+...+.........+++.++|
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G 83 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG 83 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC
Confidence 3456889999999877653 223 6777764432 221111222223345678888777
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.4 Score=39.11 Aligned_cols=80 Identities=9% Similarity=0.037 Sum_probs=51.0
Q ss_pred ECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 127 FSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMF 206 (344)
Q Consensus 127 ~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 206 (344)
+..+++++++-..+|.+++||+.++..........+..+... ... ......|..+.++.+|.-+++-+ +|..+.|
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~--~~~--~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y 92 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSP--VSD--KSSSPNITSCSLTSNGVPIVTLS-NGDSYSY 92 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccc--ccc--CCCCCcEEEEEEcCCCCEEEEEe-CCCEEEe
Confidence 334688999999999999999987654432211100000000 000 04567789999998888777655 5888999
Q ss_pred EcCCC
Q psy15157 207 DYSKS 211 (344)
Q Consensus 207 d~~~~ 211 (344)
+..-+
T Consensus 93 ~~~L~ 97 (219)
T PF07569_consen 93 SPDLG 97 (219)
T ss_pred ccccc
Confidence 87654
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=94.04 E-value=1 Score=42.21 Aligned_cols=121 Identities=11% Similarity=0.039 Sum_probs=68.4
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEE-EEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCL-SFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw 269 (344)
+..++.++.++.|.-.|..+++....+...... .+... +.....+-+++ .+..++.++.|+.+.-.
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~-~~~~~~~~~~~~rg~av------------~~~~v~v~t~dg~l~AL 135 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPD-DVIPVMCCDVVNRGVAL------------YDGKVFFGTLDARLVAL 135 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCc-ccccccccccccccceE------------ECCEEEEEcCCCEEEEE
Confidence 346666777889999999998766554432111 11100 00000010111 12345567888999999
Q ss_pred eCCCCeEEeeecccCC--CccEEE-EEEccCCCEEEEEe------CCCcEEEEEcCCCeeEEEeec
Q psy15157 270 DGVSSKCVATFSKAHD--GAEISS-LTFTRNGKYLLSSG------KDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~--~~~v~~-i~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~ 326 (344)
|.++|+.+-....... ...+.+ .... ++. ++.+. .+|.|+.+|..+|+.+-++..
T Consensus 136 Da~TGk~~W~~~~~~~~~~~~~tssP~v~-~g~-Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~ 199 (527)
T TIGR03075 136 DAKTGKVVWSKKNGDYKAGYTITAAPLVV-KGK-VITGISGGEFGVRGYVTAYDAKTGKLVWRRYT 199 (527)
T ss_pred ECCCCCEEeecccccccccccccCCcEEE-CCE-EEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence 9999998866542211 011211 1111 444 44443 268999999999999887654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.99 Score=35.29 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=24.9
Q ss_pred CeEEEEEcCCC------CEEEEEeCCCcEEEEEcCC
Q psy15157 181 EVTCLEFHPSA------PILASGSKDKTVKMFDYSK 210 (344)
Q Consensus 181 ~v~~~~~~~~~------~~l~s~~~dg~i~iwd~~~ 210 (344)
.|..++|||.| .+|++.+.+|.|.||.-..
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 78999999943 2788899999999998653
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=93.90 E-value=6.2 Score=37.72 Aligned_cols=39 Identities=8% Similarity=0.228 Sum_probs=34.3
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
..+..+..||+.++|+--...|.|.+-+....+++..|.
T Consensus 217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred ceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence 358889999999999999999999999988888877776
|
|
| >PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins | Back alignment and domain information |
|---|
Probab=93.83 E-value=5.5 Score=36.88 Aligned_cols=141 Identities=13% Similarity=0.129 Sum_probs=64.6
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccc-cceEEEEEecCCCEEEEEeCCCEEEE---EcCCCCEEEEE
Q psy15157 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQES-TFVRCLSFHPCGDYMVVGTDHFVLRL---YSSDGRIYCSG 260 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~i~~---~~~~~~~l~~~ 260 (344)
+...++|.+++..+ ..++.+|+. |+........... ..-..+...|+|++|+.+........ -..-+..++--
T Consensus 153 ~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivev 229 (477)
T PF05935_consen 153 FKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEV 229 (477)
T ss_dssp EEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE
T ss_pred eeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEE
Confidence 56678888776555 788888875 3433333322211 11233667889999988773211110 00011112222
Q ss_pred eCCC-cEEEEeCCCCeEEeee-----------c---ccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 261 SKDG-DIKIWDGVSSKCVATF-----------S---KAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 261 ~~dg-~i~iwd~~~~~~~~~~-----------~---~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
..+| .+..||+..--..... . ....=..++++.+.+ ++.+|+|+-.-..|...|.++++....+
T Consensus 230 d~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wil 309 (477)
T PF05935_consen 230 DPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWIL 309 (477)
T ss_dssp -TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEE
T ss_pred CCCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEe
Confidence 2222 3456664321100000 0 001112489999999 5555666655668999999999998888
Q ss_pred ecCC
Q psy15157 325 TGAG 328 (344)
Q Consensus 325 ~~~~ 328 (344)
-.++
T Consensus 310 g~~~ 313 (477)
T PF05935_consen 310 GPPG 313 (477)
T ss_dssp S-ST
T ss_pred CCCC
Confidence 7664
|
Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.86 Score=43.05 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=13.7
Q ss_pred HHhHHHHHHHHHHHHhhCC
Q psy15157 14 LRRQEALYRLIISQLYYDG 32 (344)
Q Consensus 14 ~~~~~~l~~~~~~~l~~~~ 32 (344)
+..++++|+++++=+.+|.
T Consensus 184 v~~Ee~v~eav~~W~~~d~ 202 (557)
T PHA02713 184 LYREGYKVTILLKWLEYNY 202 (557)
T ss_pred CCcHHHHHHHHHHHHhcCH
Confidence 3456777888888888774
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=93.60 E-value=2.9 Score=33.57 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=33.6
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 242 (344)
.|+.+...+.|.+|++.+... ........-+.|..+.++..|+|+++--
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~-~~~~~F~Tv~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEEC-PLLCTFSTVGRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCC-ceeEEEcchhheeEEEeccccceEEEEE
Confidence 343335567899999984433 2233334457799999999999999853
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.47 E-value=1.5 Score=38.00 Aligned_cols=115 Identities=16% Similarity=0.269 Sum_probs=71.4
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
+.+.++|..+++..-.+. .+..-.+..+|+++.+++++. .|+ ...=|-..-.|.+||..+......+
T Consensus 17 ~rv~viD~d~~k~lGmi~----~g~~~~~~~spdgk~~y~a~T-----~~s----R~~rG~RtDvv~~~D~~TL~~~~EI 83 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMID----TGFLGNVALSPDGKTIYVAET-----FYS----RGTRGERTDVVEIWDTQTLSPTGEI 83 (342)
T ss_dssp EEEEEEETTTTEEEEEEE----EESSEEEEE-TTSSEEEEEEE-----EEE----ETTEEEEEEEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCcEEEEee----cccCCceeECCCCCEEEEEEE-----EEe----ccccccceeEEEEEecCcCcccceE
Confidence 468899988876544333 223344678899998887541 010 0001444557999999998877655
Q ss_pred cccCC-----CccEEEEEEccCCCEEEEE--eCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 281 SKAHD-----GAEISSLTFTRNGKYLLSS--GKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 281 ~~~~~-----~~~v~~i~~~~~~~~l~s~--~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
..... ....+.+.++.||++++.. +--..|.|-|+..++.+..+.-++
T Consensus 84 ~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG 138 (342)
T PF06433_consen 84 EIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG 138 (342)
T ss_dssp EETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS
T ss_pred ecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC
Confidence 42221 1223456788999998875 345678999999988777776443
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=93.35 E-value=5.4 Score=35.31 Aligned_cols=173 Identities=11% Similarity=0.105 Sum_probs=75.1
Q ss_pred EECCCCCEEEEEe-CCCe--EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCc
Q psy15157 126 AFSIDGQLCATGS-VDAS--IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKT 202 (344)
Q Consensus 126 ~~s~~~~~l~sg~-~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 202 (344)
+|..+|+.|+-++ .||. +.+.|+.++. ..+--.+-........++|+++.++=......
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~------------------i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~ 103 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGE------------------ITQLTDGPGDNTFGGFLSPDDRALYYVKNGRS 103 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-E------------------EEE---SS-B-TTT-EE-TTSSEEEEEETTTE
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCE------------------EEECccCCCCCccceEEecCCCeEEEEECCCe
Confidence 4567887655544 4665 4555554322 22211211122224556787776654555678
Q ss_pred EEEEEcCCCccccceeeeccccceEEEEEe--cCCCEEEEEeCCCEEEEEcCCCCE---------EEEEeCCCcEEEEeC
Q psy15157 203 VKMFDYSKSSVRKAHKTIQESTFVRCLSFH--PCGDYMVVGTDHFVLRLYSSDGRI---------YCSGSKDGDIKIWDG 271 (344)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~~i~~~~~~~~~---------l~~~~~dg~i~iwd~ 271 (344)
|+-.|+.+.+....+... ...+-...|. .++..++-.- +-..+... +.-+--...|.-.|+
T Consensus 104 l~~vdL~T~e~~~vy~~p--~~~~g~gt~v~n~d~t~~~g~e------~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl 175 (386)
T PF14583_consen 104 LRRVDLDTLEERVVYEVP--DDWKGYGTWVANSDCTKLVGIE------ISREDWKPLTKWKGFREFYEARPHCRIFTIDL 175 (386)
T ss_dssp EEEEETTT--EEEEEE----TTEEEEEEEEE-TTSSEEEEEE------EEGGG-----SHHHHHHHHHC---EEEEEEET
T ss_pred EEEEECCcCcEEEEEECC--cccccccceeeCCCccEEEEEE------EeehhccCccccHHHHHHHhhCCCceEEEEEC
Confidence 888899887654444332 3333334443 3444443221 00001000 001122335666788
Q ss_pred CCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC----c-EEEEEcCC-CeeEEEeecC
Q psy15157 272 VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS----L-VKLWELSS-ARCLIAYTGA 327 (344)
Q Consensus 272 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg----~-i~vwd~~~-~~~~~~~~~~ 327 (344)
.+|+....+.. ..++..+.|+|...-+++-|..| . -|||=+++ |..+..+..+
T Consensus 176 ~tG~~~~v~~~---~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~ 234 (386)
T PF14583_consen 176 KTGERKVVFED---TDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRR 234 (386)
T ss_dssp TT--EEEEEEE---SS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS--
T ss_pred CCCceeEEEec---CccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecC
Confidence 88876655542 24789999999766666544322 1 26666554 3333444333
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=93.30 E-value=2.3 Score=38.05 Aligned_cols=64 Identities=16% Similarity=0.178 Sum_probs=31.1
Q ss_pred cceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEeeecccC--------------CC
Q psy15157 224 TFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS---KCVATFSKAH--------------DG 286 (344)
Q Consensus 224 ~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~--------------~~ 286 (344)
.-|+.|..|.|.++|++ ++=.+|.|+.||+... +.+..+..+. -.
T Consensus 312 ~LitDI~iSlDDrfLYv------------------s~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~ 373 (461)
T PF05694_consen 312 PLITDILISLDDRFLYV------------------SNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLR 373 (461)
T ss_dssp -----EEE-TTS-EEEE------------------EETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------
T ss_pred CceEeEEEccCCCEEEE------------------EcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccC
Confidence 34788888888887776 4556788888887653 3332221110 01
Q ss_pred ccEEEEEEccCCCEEEEEe
Q psy15157 287 AEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~ 305 (344)
+...-+..|.||+.|...+
T Consensus 374 GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 374 GGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp S----EEE-TTSSEEEEE-
T ss_pred CCCCeEEEccCCeEEEEEe
Confidence 1246778889999887654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.58 Score=44.14 Aligned_cols=39 Identities=21% Similarity=0.560 Sum_probs=30.5
Q ss_pred cEEEEEEcc----CCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 288 EISSLTFTR----NGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 288 ~v~~i~~~~----~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
...+++++. +..+|++-+.|+.+|+||+.+++++.+..-
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEET
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEecc
Confidence 355566666 778999999999999999999999877643
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=93.05 E-value=4.9 Score=33.95 Aligned_cols=125 Identities=20% Similarity=0.199 Sum_probs=72.4
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
..++.|+.|+.+| +.++++....... .......|..+...+.-+.+++-++ +.+.++
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~---~i~~~~~I~ql~vl~~~~~llvLsd-~~l~~~~L~~l~~~~~~~~~~~~~ 79 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPT---RILKLSSITQLSVLPELNLLLVLSD-GQLYVYDLDSLEPVSTSAPLAFPK 79 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccce---eEeecceEEEEEEecccCEEEEEcC-CccEEEEchhhccccccccccccc
Confidence 3567889999888 8999983322111 1122333777777776665555433 555554
Q ss_pred -----------------c----CCCCEEEEEeCCCcEEEEeCCCC-----eEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 251 -----------------S----SDGRIYCSGSKDGDIKIWDGVSS-----KCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 -----------------~----~~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
. ..+...++......|.+|..... +....+... ..+.+++|. ++.|+.|
T Consensus 80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp---~~~~~i~~~--~~~i~v~ 154 (275)
T PF00780_consen 80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLP---DPPSSIAFL--GNKICVG 154 (275)
T ss_pred cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcC---CCcEEEEEe--CCEEEEE
Confidence 1 11122223333447777776543 344444422 358899998 5667777
Q ss_pred eCCCcEEEEEcCCCeeEEEe
Q psy15157 305 GKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~ 324 (344)
..++ ..+.|+.++.....+
T Consensus 155 ~~~~-f~~idl~~~~~~~l~ 173 (275)
T PF00780_consen 155 TSKG-FYLIDLNTGSPSELL 173 (275)
T ss_pred eCCc-eEEEecCCCCceEEe
Confidence 6444 788899877664444
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >smart00667 LisH Lissencephaly type-1-like homology motif | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.28 Score=26.16 Aligned_cols=31 Identities=32% Similarity=0.406 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHHhhCCcHHHHHHHHhhcCC
Q psy15157 16 RQEALYRLIISQLYYDGHHPMAITLQSSCNV 46 (344)
Q Consensus 16 ~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~ 46 (344)
++..+..+++++|...|+..+|..+..+.+.
T Consensus 2 ~~~~l~~lI~~yL~~~g~~~ta~~l~~e~~~ 32 (34)
T smart00667 2 SRSELNRLILEYLLRNGYEETAETLQKESGL 32 (34)
T ss_pred cHHHHHHHHHHHHHHcCHHHHHHHHHHHhCC
Confidence 4678999999999999999999999887653
|
Alpha-helical motif present in Lis1, treacle, Nopp140, some katanin p60 subunits, muskelin, tonneau, LEUNIG and numerous WD40 repeat-containing proteins. It is suggested that LisH motifs contribute to the regulation of microtubule dynamics, either by mediating dimerisation, or else by binding cytoplasmic dynein heavy chain or microtubules directly. |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.99 E-value=5 Score=33.90 Aligned_cols=135 Identities=13% Similarity=0.136 Sum_probs=78.9
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-CCEEEEE-------
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRLY------- 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~~------- 250 (344)
.+-+..+.++.+ +...+..+.-++|.|+.+.............+.-.+ |.-.|++..++.. ++.+.+=
T Consensus 86 ~~l~~Dv~vse~--yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyayg--v~vsGn~aYVadlddgfLivdvsdpssP 161 (370)
T COG5276 86 RDLFADVRVSEE--YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYG--VYVSGNYAYVADLDDGFLIVDVSDPSSP 161 (370)
T ss_pred hhhhheeEeccc--EEEEEcCCCceEEEeccCCCCcceeccccCCceEEE--EEecCCEEEEeeccCcEEEEECCCCCCc
Confidence 445667777644 555566777899999998765443333222233333 4446888888874 4443331
Q ss_pred ----------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 251 ----------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 251 ----------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
.-.|++-..+..|+-+.+-|+........+.....+..+.++..+++..+++..+ --+.+-|
T Consensus 162 ~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd 239 (370)
T COG5276 162 QLAGRYALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVD 239 (370)
T ss_pred eeeeeeccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc--cceEEEe
Confidence 1235566667788888999887654332222222223578888887766665543 2355556
Q ss_pred cCCCe
Q psy15157 315 LSSAR 319 (344)
Q Consensus 315 ~~~~~ 319 (344)
..+.+
T Consensus 240 ~s~~s 244 (370)
T COG5276 240 VSGPS 244 (370)
T ss_pred cCCCC
Confidence 65444
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=92.79 E-value=6.3 Score=34.56 Aligned_cols=154 Identities=12% Similarity=0.096 Sum_probs=75.7
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEE-EEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKI-LDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
.+.+.++.+.+++.+++++. .|.+.. ++-. ...+.. ....-...++++.+.++++.++.+
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~g----------------g~tW~~--~~~~~~~~l~~i~~~~~g~~~~vg 232 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPG----------------QTAWTP--HQRNSSRRLQSMGFQPDGNLWMLA 232 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEEcCCC----------------CCeEEE--eeCCCcccceeeeEcCCCCEEEEe
Confidence 34577888888877666654 454332 2111 001111 112334578899999998876654
Q ss_pred eCCCcEEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 275 (344)
..|.+++=..+.+..-...... .....+..+.+.+++..++++ .+|.|. .....++
T Consensus 233 -~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G--------------------~~G~v~-~S~d~G~ 290 (334)
T PRK13684 233 -RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG--------------------GNGTLL-VSKDGGK 290 (334)
T ss_pred -cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEEc--------------------CCCeEE-EeCCCCC
Confidence 4576653223333221111111 112346777887766544432 233222 1122222
Q ss_pred EEeeecc-cCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 276 CVATFSK-AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 276 ~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
.-..... .........+.|..+++.++ .+..|.|.-|+
T Consensus 291 tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~ 329 (334)
T PRK13684 291 TWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYV 329 (334)
T ss_pred CCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEEec
Confidence 1111110 01112477788776666655 55578877765
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=92.69 E-value=7.3 Score=35.03 Aligned_cols=141 Identities=15% Similarity=0.201 Sum_probs=68.5
Q ss_pred CCCEEEEEe-CCCcEEEEEcCCC-ccccceeeecc--------ccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEE
Q psy15157 190 SAPILASGS-KDKTVKMFDYSKS-SVRKAHKTIQE--------STFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCS 259 (344)
Q Consensus 190 ~~~~l~s~~-~dg~i~iwd~~~~-~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~ 259 (344)
+.++|+..+ ..+.|+|.|+.+. +..+..+.... -.....+..-|+|+.++++-.+. -
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~-------------~ 152 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDA-------------D 152 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEET-------------T
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCC-------------C
Confidence 344666655 6789999998743 22222222211 11222334456777776643211 1
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCC-CccEEEEEEccCCCEEEEEeC--------------------CCcEEEEEcCCC
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHD-GAEISSLTFTRNGKYLLSSGK--------------------DSLVKLWELSSA 318 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~s~~~--------------------dg~i~vwd~~~~ 318 (344)
|..-|.+.+.|-++.+....+..... ...-..+.|.|..+.++|+.. ...+.+||+.+.
T Consensus 153 G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r 232 (461)
T PF05694_consen 153 GNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTR 232 (461)
T ss_dssp S-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTT
T ss_pred CCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCC
Confidence 22335677888887777766653221 122456778888888887642 356999999999
Q ss_pred eeEEEeecCCCcCceeeeeeeccCC
Q psy15157 319 RCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+.++++.-.......+.+.|..+++
T Consensus 233 ~~~Q~idLg~~g~~pLEvRflH~P~ 257 (461)
T PF05694_consen 233 KLLQTIDLGEEGQMPLEVRFLHDPD 257 (461)
T ss_dssp EEEEEEES-TTEEEEEEEEE-SSTT
T ss_pred cEeeEEecCCCCCceEEEEecCCCC
Confidence 9999998776665667777777654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=92.57 E-value=6.7 Score=34.28 Aligned_cols=176 Identities=12% Similarity=0.085 Sum_probs=89.3
Q ss_pred CCceEEEEECCCCCEEEEEeCCCe------EEEEEcCCccc-cccC--CCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDAS------IKILDVDRMLA-KSSM--ESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~------v~iwd~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
-+....+.+.+++..+++.+.+|. +..+++..... .... .......+ ..+... ..-.-..-+|++.+
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~G~~~---~~~~~D~Egi~~~~ 94 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRD-PDGQPF---PKNGLDPEGIAVPP 94 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccC-CCCCcC---CcCCCChhHeEEec
Confidence 356788889876666777777777 55555542000 0000 00000000 000000 00111445788877
Q ss_pred CCCEEEEEeCC------CcEEEEEcCCCcccccee-------------eeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 190 SAPILASGSKD------KTVKMFDYSKSSVRKAHK-------------TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 190 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~-------------~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
++.++++.=.+ ..|..++.. ++....+. ....+.....++++|+|+.|+++......
T Consensus 95 ~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~--- 170 (326)
T PF13449_consen 95 DGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLK--- 170 (326)
T ss_pred CCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECcccc---
Confidence 88888876666 778888865 44433221 12245568899999999977766543210
Q ss_pred cCCCCEE-EEEeCCCcEEEEeCCC-CeE----Eeeeccc---CCCccEEEEEEccCCCEEEE
Q psy15157 251 SSDGRIY-CSGSKDGDIKIWDGVS-SKC----VATFSKA---HDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 251 ~~~~~~l-~~~~~dg~i~iwd~~~-~~~----~~~~~~~---~~~~~v~~i~~~~~~~~l~s 303 (344)
.++..- ...+..-.|..||..+ ++. ...+... .....|..+.+.+++++|+.
T Consensus 171 -~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 171 -QDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred -CCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 111110 0111112344555554 222 2222210 02346899999999997765
|
|
| >TIGR03032 conserved hypothetical protein TIGR03032 | Back alignment and domain information |
|---|
Probab=92.53 E-value=6.2 Score=33.81 Aligned_cols=84 Identities=14% Similarity=0.209 Sum_probs=61.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC----C----------------CcEEE
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK----D----------------SLVKL 312 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~----d----------------g~i~v 312 (344)
+|++.++-+..|.+.-+|..+|+........ +....+.|. |+++++|-+ + .-|.+
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vp---G~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~v 286 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLP---GFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAV 286 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEECC---CCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEE
Confidence 6777888888889999998777543332211 246778887 888766532 1 34789
Q ss_pred EEcCCCeeEEEeecCCCcCceeeeeeecc
Q psy15157 313 WELSSARCLIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 313 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (344)
.|+++|..++.++..+.....+++..-++
T Consensus 287 idl~tG~vv~~l~feg~v~EifdV~vLPg 315 (335)
T TIGR03032 287 IDLNSGDVVHWLRFEGVIEEIYDVAVLPG 315 (335)
T ss_pred EECCCCCEEEEEEeCCceeEEEEEEEecC
Confidence 99999999999999888888877776554
|
This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown. |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=92.46 E-value=3.3 Score=37.24 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=60.6
Q ss_pred eEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 171 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
....+......+.++..+|.+++.++...=|.|.++|+.++...+..+..... .+.=+.....+..-- .........
T Consensus 299 ~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA-qc~wi~~~~~~~~~~--~~~~~~~~~ 375 (415)
T PF14655_consen 299 MRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA-QCGWIEVPEEGDRDR--SNSNSPKSS 375 (415)
T ss_pred eEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccc-eEEEEEeeccccccc--ccccccCCC
Confidence 44556667778999999999988888777799999999988766555432211 111111111111000 000000000
Q ss_pred cCCCCE-EEEEeCCCcEEEEeCCCCeEEeeec
Q psy15157 251 SSDGRI-YCSGSKDGDIKIWDGVSSKCVATFS 281 (344)
Q Consensus 251 ~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~ 281 (344)
.....+ ++-+-.-|.|.||.+++|..+..+.
T Consensus 376 ~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 376 SRFALFLVIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred CcceEEEEEEeccCCeEEEEecCCCCEEEEEE
Confidence 000111 2235567889999999888777665
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.23 E-value=7 Score=33.75 Aligned_cols=76 Identities=11% Similarity=0.066 Sum_probs=46.8
Q ss_pred EcCCCCEEEEEeCC-CcEEEEeCCC--C----eEEeeecccCCCccEEEEEEccCCCEEEEEeCCC-cEEEEEcCCCeeE
Q psy15157 250 YSSDGRIYCSGSKD-GDIKIWDGVS--S----KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-LVKLWELSSARCL 321 (344)
Q Consensus 250 ~~~~~~~l~~~~~d-g~i~iwd~~~--~----~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-~i~vwd~~~~~~~ 321 (344)
|+|+++.++.+... +.|+-|++.. + +.......... +..-.++.+.+|.+-+++..+| .|.+|+.. |+.+
T Consensus 170 ~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~-G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~ 247 (307)
T COG3386 170 FSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEP-GLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLL 247 (307)
T ss_pred ECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCC-CCCCceEEeCCCCEEEecccCCceEEEECCC-CcEE
Confidence 47777666555443 6677776642 1 11111111122 3456678888888776555554 89999997 9988
Q ss_pred EEeecC
Q psy15157 322 IAYTGA 327 (344)
Q Consensus 322 ~~~~~~ 327 (344)
..+..+
T Consensus 248 ~~i~lP 253 (307)
T COG3386 248 GEIKLP 253 (307)
T ss_pred EEEECC
Confidence 888766
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=92.06 E-value=9 Score=34.63 Aligned_cols=164 Identities=11% Similarity=0.095 Sum_probs=83.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC----CCCEEEEEeCCCcEEE
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP----SAPILASGSKDKTVKM 205 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~s~~~dg~i~i 205 (344)
+...+++||..|.++||+....... ....+ .-..-..+|..+..-. .....++.-.-..+.+
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~-------------~~~ll-lE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~v 101 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQ-------------PEDLL-LETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSV 101 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCC-------------CccEE-EEEecCCcEEEEEeccccCCCCcceEEEecCCEEEE
Confidence 3469999999999999998431110 00111 1112335666665432 1222333355577777
Q ss_pred EEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC
Q psy15157 206 FDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD 285 (344)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 285 (344)
|.+..............-..+....+....--+.+|.-.+. ..-.++.+=+.||.+.+|+-+.--..+.+...-
T Consensus 102 Y~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~-----~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~l- 175 (418)
T PF14727_consen 102 YSVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGV-----KGRDFICVQSMDGSLSFFEQESFAFSRFLPDFL- 175 (418)
T ss_pred EEEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCC-----CCceEEEEEecCceEEEEeCCcEEEEEEcCCCC-
Confidence 87732211100000000000111111111111222221111 124566778999999999977655444444322
Q ss_pred CccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 286 GAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 286 ~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
-.-.++|.+....+++++.+..+..|..
T Consensus 176 --lPgPl~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 176 --LPGPLCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred --CCcCeEEeecCCEEEEecCceeEEEecH
Confidence 1334678888888888888888888765
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=91.90 E-value=6.7 Score=32.83 Aligned_cols=91 Identities=13% Similarity=0.154 Sum_probs=53.9
Q ss_pred ceEEEEEecCCCEEEEEe---CCCEEEE--------------------EcCCCCEEEEEeCCCcEEEEe-CCCCeEEe-e
Q psy15157 225 FVRCLSFHPCGDYMVVGT---DHFVLRL--------------------YSSDGRIYCSGSKDGDIKIWD-GVSSKCVA-T 279 (344)
Q Consensus 225 ~v~~~~~~~~~~~l~~~~---~~~~i~~--------------------~~~~~~~l~~~~~dg~i~iwd-~~~~~~~~-~ 279 (344)
.+.+.++++++..++... ....+.+ |++++...+....+...+++. ..++.... .
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~ 104 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVE 104 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEE
Confidence 466777788877666544 2333333 367777776666666666663 33332221 2
Q ss_pred ecccCCCccEEEEEEccCCCEEEEEe---CCCcEEEEEc
Q psy15157 280 FSKAHDGAEISSLTFTRNGKYLLSSG---KDSLVKLWEL 315 (344)
Q Consensus 280 ~~~~~~~~~v~~i~~~~~~~~l~s~~---~dg~i~vwd~ 315 (344)
+........|.++.++|||..++.-. .++.|.+=-+
T Consensus 105 v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 105 VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 22111111699999999999877654 4566776654
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=91.74 E-value=1.2 Score=25.02 Aligned_cols=32 Identities=9% Similarity=0.199 Sum_probs=25.7
Q ss_pred cCCCEEEEEe-CCCcEEEEEcCCCeeEEEeecC
Q psy15157 296 RNGKYLLSSG-KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 296 ~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
|++++|+++. .++.|.++|..+++.+..+.-.
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg 33 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG 33 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence 5677776655 5889999999999999888763
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=91.56 E-value=6 Score=34.65 Aligned_cols=52 Identities=15% Similarity=0.318 Sum_probs=33.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceee-----eccccceEEEEEecC
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT-----IQESTFVRCLSFHPC 234 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~ 234 (344)
.-+.|+|.|++.+|++ ...|.|++++ ..+.....+.. .........++++|+
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence 3578999999987775 5599999999 33332111111 123456788999994
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=91.43 E-value=6.9 Score=35.74 Aligned_cols=61 Identities=21% Similarity=0.462 Sum_probs=43.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
...+++++|..|-|++||.-..+....+. +- +..|..+..+.+|+++++.| ...+.+-|++
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP-~l-G~aIk~idvta~Gk~ilaTC-k~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALP-GL-GDAIKHIDVTANGKHILATC-KNYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCc-cc-ccceeeeEeecCCcEEEEee-cceEEEEecc
Confidence 45577789999999999954433333333 22 23599999999999988777 4567777764
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=91.26 E-value=10 Score=33.65 Aligned_cols=175 Identities=14% Similarity=0.141 Sum_probs=72.7
Q ss_pred cCCCceEEEEECCCC-CEEEEEeC---CC-eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc--CCeEEEEEcC
Q psy15157 117 SHKSPCRAGAFSIDG-QLCATGSV---DA-SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI--EEVTCLEFHP 189 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~-~~l~sg~~---dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~ 189 (344)
.-...+..+.|||.. .+++-|.. +. .-|||-+++. +.....+..|. ..+..=-|.|
T Consensus 185 ~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~d-----------------g~~~~~v~~~~~~e~~gHEfw~~ 247 (386)
T PF14583_consen 185 EDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTD-----------------GSNVKKVHRRMEGESVGHEFWVP 247 (386)
T ss_dssp EESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETT-----------------S---EESS---TTEEEEEEEE-T
T ss_pred ecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcC-----------------CCcceeeecCCCCcccccccccC
Confidence 344567788899844 45544433 33 2478877531 22222333332 2334446888
Q ss_pred CCCEEE--EE---eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC
Q psy15157 190 SAPILA--SG---SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG 264 (344)
Q Consensus 190 ~~~~l~--s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg 264 (344)
+|..+. +. +.+..|.-+|+.+++..... ...+...+..+++|++++--+.|.-+.+-.+++..+ -.+.
T Consensus 248 DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~----~~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~---~~~p 320 (386)
T PF14583_consen 248 DGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLM----EMPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKI---ENDP 320 (386)
T ss_dssp TSS-EEEEEEETTT--EEEEEE-TTT--EEEEE----EE-SEEEEEE-TTSSEEEEEE----------------------
T ss_pred CCCEEEEEeecCCCCceEEEeeCCCCCCceEEE----eCCceeeeEEcCCCCEEEecCCCCCcccccccccee---cCCc
Confidence 887433 22 22445677777776433221 112344556677888776544332222211222111 2345
Q ss_pred cEEEEeCCCCeEEeeec--------ccCCCccEEEEEEccCCCEEE-EEeCCCcEEEEEc
Q psy15157 265 DIKIWDGVSSKCVATFS--------KAHDGAEISSLTFTRNGKYLL-SSGKDSLVKLWEL 315 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~--------~~~~~~~v~~i~~~~~~~~l~-s~~~dg~i~vwd~ 315 (344)
-|++++...++...... .++....=....|+|||++++ ++...|...||=+
T Consensus 321 ~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v 380 (386)
T PF14583_consen 321 WIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV 380 (386)
T ss_dssp EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred EEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence 68888888776432111 111111124678999999865 5556777666543
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=91.08 E-value=0.048 Score=48.51 Aligned_cols=143 Identities=12% Similarity=0.173 Sum_probs=86.5
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE-EEEEeCCC
Q psy15157 123 RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI-LASGSKDK 201 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~dg 201 (344)
....|-+.+.-++.++.+..+..||-.. +.... ....+....++|..++.. ++.+-..+
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~ag-------------------q~~le-~n~tg~aldm~wDkegdvlavlAek~~ 97 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKAG-------------------QVILE-LNPTGKALDMAWDKEGDVLAVLAEKTG 97 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhhc-------------------ceecc-cCCchhHhhhhhccccchhhhhhhcCC
Confidence 3345666666688888888898998642 11111 123455667888887774 45566779
Q ss_pred cEEEEEcCCCccccceeeec-cccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 202 TVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
.+.+||+.+... ......+ +.... +.|++ .+..++.|...|.+.|++..+.+.+...
T Consensus 98 piylwd~n~eyt-qqLE~gg~~s~sl--l~wsK-------------------g~~el~ig~~~gn~viynhgtsR~iiv~ 155 (615)
T KOG2247|consen 98 PIYLWDVNSEYT-QQLESGGTSSKSL--LAWSK-------------------GTPELVIGNNAGNIVIYNHGTSRRIIVM 155 (615)
T ss_pred CeeechhhhhhH-HHHhccCcchHHH--Hhhcc-------------------CCccccccccccceEEEeccchhhhhhh
Confidence 999999987532 2222111 11111 44555 4445556677889999998877655443
Q ss_pred cccCCCccEEEEEEccCCCEEEEEeCCCcE
Q psy15157 281 SKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310 (344)
Q Consensus 281 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i 310 (344)
- .|. .++++++|.+.+. .+.++.|..+
T Consensus 156 G-kh~-RRgtq~av~lEd~-vil~dcd~~L 182 (615)
T KOG2247|consen 156 G-KHQ-RRGTQIAVTLEDY-VILCDCDNTL 182 (615)
T ss_pred c-ccc-cceeEEEecccce-eeecCcHHHH
Confidence 2 243 4689999998764 4555555443
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.9 Score=40.47 Aligned_cols=144 Identities=17% Similarity=0.179 Sum_probs=88.6
Q ss_pred EecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeec--cc---cceE-EEEEecCCCEEEEEeCCCEE
Q psy15157 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ--ES---TFVR-CLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 174 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~---~~v~-~~~~~~~~~~l~~~~~~~~i 247 (344)
.+......|..+-..|+|+.+..-+. ..+.++++.+...... +... .+ ..|+ .+..-..|.-++++..||.+
T Consensus 215 ~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~r-kl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~v 292 (733)
T COG4590 215 LLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIR-KLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLV 292 (733)
T ss_pred hcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchh-hhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCce
Confidence 34445566777888999997766554 6788888876543211 1111 11 1111 12223356778888888888
Q ss_pred EEE-----------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCC
Q psy15157 248 RLY-----------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG 298 (344)
Q Consensus 248 ~~~-----------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 298 (344)
.-| ..+.+-+++-+..|++.++...+.+.+..-. ..+ .+.-+++||++
T Consensus 293 sQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~-~~~--~~~~~~~Sp~~ 369 (733)
T COG4590 293 SQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER-AYQ--APQLVAMSPNQ 369 (733)
T ss_pred eeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhh-hhc--CcceeeeCccc
Confidence 888 2233456666777777777655544432222 222 35678999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 299 KYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 299 ~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
.+|++-. .|.|+++.+.+..+-.+
T Consensus 370 ~~Ll~e~-~gki~~~~l~Nr~Peis 393 (733)
T COG4590 370 AYLLSED-QGKIRLAQLENRNPEIS 393 (733)
T ss_pred chheeec-CCceEEEEecCCCCCcc
Confidence 9988764 67899998877654333
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=90.79 E-value=12 Score=33.82 Aligned_cols=29 Identities=10% Similarity=0.099 Sum_probs=23.6
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVD 149 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~ 149 (344)
+.|.++.|+.+. .|+....||.+++||+.
T Consensus 81 ~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 81 GRIVGMGWTDDE-ELVVVQSDGTVRVYDLF 109 (410)
T ss_pred CCEEEEEECCCC-eEEEEEcCCEEEEEeCC
Confidence 789999998754 55566689999999985
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=90.36 E-value=0.44 Score=45.93 Aligned_cols=166 Identities=17% Similarity=0.264 Sum_probs=85.6
Q ss_pred CCceEEEEECC---CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE---------
Q psy15157 119 KSPCRAGAFSI---DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE--------- 186 (344)
Q Consensus 119 ~~~v~~~~~s~---~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--------- 186 (344)
...+.-+.|+| +.-++..+-.++.|++...++... ..+.+|...+..++
T Consensus 180 gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-------------------~l~rsHs~~~~d~a~~~~g~~~l 240 (1283)
T KOG1916|consen 180 GSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-------------------SLFRSHSQRVTDMAFFAEGVLKL 240 (1283)
T ss_pred CCCcceeeecccccccceeeeccCCCceeEeeechHHH-------------------HHHHhcCCCcccHHHHhhchhhh
Confidence 33444455544 566777888889999877764211 22334554444333
Q ss_pred --EcCCCCEEEEEeCCCcEEEEEcCC-Ccc--ccceeeeccc-cceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEE
Q psy15157 187 --FHPSAPILASGSKDKTVKMFDYSK-SSV--RKAHKTIQES-TFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSG 260 (344)
Q Consensus 187 --~~~~~~~l~s~~~dg~i~iwd~~~-~~~--~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~ 260 (344)
.+|||..|+.++.||.++.|-+-- ++. ...+.-..|. .+-.|..++.+....+.- +.-.+++++
T Consensus 241 ~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i----------~~w~~~Itt 310 (1283)
T KOG1916|consen 241 ASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSI----------GKWVLRITT 310 (1283)
T ss_pred eeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCcc----------ceeEEEEec
Confidence 588999999999999988887532 110 0111111222 223333333322211110 011122333
Q ss_pred -eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE------------EEEEeCCCcEEEEEcCCC
Q psy15157 261 -SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY------------LLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 261 -~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~------------l~s~~~dg~i~vwd~~~~ 318 (344)
..+..+++|.....+|...+. .. .|..+. -++|.. +++.+-++.|.+|.-+..
T Consensus 311 td~nre~k~w~~a~w~Cll~~~--~d--~v~iV~-p~~~~v~~~~~~~~~~~~~v~r~v~~~i~~~qn~~a 376 (1283)
T KOG1916|consen 311 TDVNREEKFWAEAPWQCLLDKL--ID--GVQIVG-PHDGEVTDLSMCQWMTTRLVSRSVDGTIKIWQNRKA 376 (1283)
T ss_pred ccCCcceeEeeccchhhhhhhc--cc--ceEeec-CCCccccchhhhHHHHHHHHHhhhHHHHHHhhcchh
Confidence 344569999988877762221 11 234443 233331 344567888999865543
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=90.11 E-value=9 Score=37.68 Aligned_cols=128 Identities=11% Similarity=0.106 Sum_probs=69.0
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccc------eEEEEEecCCCEEEEEeCCCEEE-----EEcCCCCEEEE
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF------VRCLSFHPCGDYMVVGTDHFVLR-----LYSSDGRIYCS 259 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~~~~~~~~i~-----~~~~~~~~l~~ 259 (344)
+..++.++.++.|.-.|..+++.+..+........ .+.+.+... ..+... -=...+..++.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~--------p~~~~~~~~~~~p~~~~~rV~~ 265 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDA--------PAAAAGPAAPAAPADCARRIIL 265 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecC--------CcccccccccccccccCCEEEE
Confidence 44677778888999999998876655443221110 111111110 000000 00013446667
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCC----------CccEEEEEEcc--CCCEEEEEeC----------CCcEEEEEcCC
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHD----------GAEISSLTFTR--NGKYLLSSGK----------DSLVKLWELSS 317 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~~v~~i~~~~--~~~~l~s~~~----------dg~i~vwd~~~ 317 (344)
++.|+.+.-.|.++|+....+..... ...-..+.-.| .+..+++|+. +|.|+-+|.++
T Consensus 266 ~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~T 345 (764)
T TIGR03074 266 PTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNT 345 (764)
T ss_pred ecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCC
Confidence 78888888888888887765531100 00000011111 1334555542 68899999999
Q ss_pred CeeEEEeec
Q psy15157 318 ARCLIAYTG 326 (344)
Q Consensus 318 ~~~~~~~~~ 326 (344)
|+.+-.+..
T Consensus 346 Gkl~W~~~~ 354 (764)
T TIGR03074 346 GALVWAWDP 354 (764)
T ss_pred CcEeeEEec
Confidence 999988763
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=90.07 E-value=12 Score=34.39 Aligned_cols=29 Identities=17% Similarity=0.008 Sum_probs=23.0
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFD 207 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 207 (344)
.-.|..+..++.|..++-.+.+|.+.++=
T Consensus 103 ~feV~~vl~s~~GS~VaL~G~~Gi~vMeL 131 (741)
T KOG4460|consen 103 LFEVYQVLLSPTGSHVALIGIKGLMVMEL 131 (741)
T ss_pred eEEEEEEEecCCCceEEEecCCeeEEEEc
Confidence 34678888999999998888888776654
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=89.95 E-value=11 Score=31.67 Aligned_cols=164 Identities=13% Similarity=0.070 Sum_probs=90.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
..-...+.|..+|.++-+.+.-| .|+.+|+.++..... ..+. ..---..++... ++++.-
T Consensus 44 ~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~----------------~~l~-~~~FgEGit~~~-d~l~qL 105 (264)
T PF05096_consen 44 TAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQS----------------VPLP-PRYFGEGITILG-DKLYQL 105 (264)
T ss_dssp T-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEE----------------EE-T-TT--EEEEEEET-TEEEEE
T ss_pred cccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEE----------------EECC-ccccceeEEEEC-CEEEEE
Confidence 34467788877888888888777 688888875432211 1111 111112333332 223333
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC 276 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 276 (344)
.=.++...+||..+-+....+.... .-+.++ .+|..|+ .......|+++|..+.+.
T Consensus 106 TWk~~~~f~yd~~tl~~~~~~~y~~---EGWGLt--~dg~~Li-------------------~SDGS~~L~~~dP~~f~~ 161 (264)
T PF05096_consen 106 TWKEGTGFVYDPNTLKKIGTFPYPG---EGWGLT--SDGKRLI-------------------MSDGSSRLYFLDPETFKE 161 (264)
T ss_dssp ESSSSEEEEEETTTTEEEEEEE-SS---S--EEE--ECSSCEE-------------------EE-SSSEEEEE-TTT-SE
T ss_pred EecCCeEEEEccccceEEEEEecCC---cceEEE--cCCCEEE-------------------EECCccceEEECCcccce
Confidence 3457889999998876655554432 233444 2344444 444556677777776665
Q ss_pred EeeecccCCC---ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 277 VATFSKAHDG---AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 277 ~~~~~~~~~~---~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
...+.-...+ ..++-+-|. +|...+=.=....|...|..+|+.+..+.
T Consensus 162 ~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iD 212 (264)
T PF05096_consen 162 VRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWID 212 (264)
T ss_dssp EEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE
T ss_pred EEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEE
Confidence 5555422222 236667776 66665655567778888999999887774
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=89.57 E-value=6.8 Score=28.93 Aligned_cols=95 Identities=15% Similarity=0.101 Sum_probs=55.2
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-----CCCEEEEE
Q psy15157 123 RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-----SAPILASG 197 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~l~s~ 197 (344)
..-.|......|++++.-|+|.|++......... .....+..+ .-...|++++--+ +...|+.|
T Consensus 2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~----------~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliG 70 (136)
T PF14781_consen 2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTG----------RQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIG 70 (136)
T ss_pred eEEEeCCCceeEEEEecCCEEEEECCCccccccc----------cccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEe
Confidence 3446666666889999999999998753211110 011222222 3455677776544 23467776
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEe
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 232 (344)
+. .++..||+....-.. . ..-...+.++.+-
T Consensus 71 t~-t~llaYDV~~N~d~F--y-ke~~DGvn~i~~g 101 (136)
T PF14781_consen 71 TQ-TSLLAYDVENNSDLF--Y-KEVPDGVNAIVIG 101 (136)
T ss_pred cc-ceEEEEEcccCchhh--h-hhCccceeEEEEE
Confidence 64 679999998764322 1 1223456666664
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=89.20 E-value=8.2 Score=39.22 Aligned_cols=33 Identities=30% Similarity=0.221 Sum_probs=27.8
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~ 150 (344)
-......++|+|.-.++|.|...|.|+++-...
T Consensus 34 ~~~~~~~~afD~~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 34 FPSTPSALAFDPTQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred CCCCCcceeeccccceEEEEEecccEEEecccc
Confidence 344667789999999999999999999998753
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=88.87 E-value=11 Score=35.54 Aligned_cols=127 Identities=14% Similarity=0.109 Sum_probs=62.2
Q ss_pred CCCEEEEEeCCC------cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC-----EEEEEc-------
Q psy15157 190 SAPILASGSKDK------TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF-----VLRLYS------- 251 (344)
Q Consensus 190 ~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~~~------- 251 (344)
++.+++.|+.++ .+..||..+.+................+. -++..++.|+.++ .+..|+
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 371 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESKWR 371 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence 455677776543 57788887765432221111111112222 2566666776542 233332
Q ss_pred ----------------CCCCEEEEEeCC------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC-
Q psy15157 252 ----------------SDGRIYCSGSKD------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS- 308 (344)
Q Consensus 252 ----------------~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg- 308 (344)
.++++++.|+.+ ..+..||..+.+....-....... -.+++ ..+++.++.||.++
T Consensus 372 ~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~ 449 (534)
T PHA03098 372 EEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHY-GGCAI-YHDGKIYVIGGISYI 449 (534)
T ss_pred eCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcccc-CceEE-EECCEEEEECCccCC
Confidence 245566666632 357788877665432211011101 11222 22566667776432
Q ss_pred -------cEEEEEcCCCee
Q psy15157 309 -------LVKLWELSSARC 320 (344)
Q Consensus 309 -------~i~vwd~~~~~~ 320 (344)
.+.+||..+++.
T Consensus 450 ~~~~~~~~v~~yd~~~~~W 468 (534)
T PHA03098 450 DNIKVYNIVESYNPVTNKW 468 (534)
T ss_pred CCCcccceEEEecCCCCce
Confidence 388889877653
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=88.42 E-value=9.3 Score=31.68 Aligned_cols=95 Identities=19% Similarity=0.384 Sum_probs=53.7
Q ss_pred EEEcCCCCEEEEEeC-C--CcEEEEEcCC----CccccceeeeccccceEEEEEecCCCEEEEEeCCCE-EEEE------
Q psy15157 185 LEFHPSAPILASGSK-D--KTVKMFDYSK----SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV-LRLY------ 250 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~-d--g~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-i~~~------ 250 (344)
-.+-++|++|.+|+. + ..+++++.-. ..............+-.+...-|||+.|++|+.... ..+|
T Consensus 72 g~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~ 151 (243)
T PF07250_consen 72 GAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPG 151 (243)
T ss_pred cCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccCC
Confidence 356789999998876 2 4477887543 111111111122333344555678999888875532 2222
Q ss_pred --------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeec
Q psy15157 251 --------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS 281 (344)
Q Consensus 251 --------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 281 (344)
-|+|++|+.+..+. .|||..+.+.+..+.
T Consensus 152 ~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~lP 206 (243)
T PF07250_consen 152 PGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTLP 206 (243)
T ss_pred CCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeCC
Confidence 56777777776554 445766666555543
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=88.37 E-value=0.67 Score=43.74 Aligned_cols=87 Identities=10% Similarity=0.026 Sum_probs=44.1
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCcccccc-C---CCCCCc-----CCCCCCceEEEecCCcCCeEEEEEcC----CCCEEE
Q psy15157 129 IDGQLCATGSVDASIKILDVDRMLAKSS-M---ESSEPQ-----NDQQGHPVIRTLYDHIEEVTCLEFHP----SAPILA 195 (344)
Q Consensus 129 ~~~~~l~sg~~dg~v~iwd~~~~~~~~~-~---~~~~~~-----~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~ 195 (344)
++...++.+..||.+............. . ...... ...-... ...-..-.+.+..++++. +..+++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWS-YRGDNSSSSVAASLAVSSSEINDDTFLF 234 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT----SSSS---EEEEEE-----ETTTEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcc-cccCCCCCCccceEEEecceeCCCCEEE
Confidence 3667788888999988888764210000 0 000000 0000000 111112234456666666 667999
Q ss_pred EEeCCCcEEEEEcCCCccccc
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKA 216 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~ 216 (344)
+.+.|+++|+||+.++++...
T Consensus 235 tl~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 235 TLSRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp EEETTSEEEEEETTTTCEEEE
T ss_pred EEeCCCeEEEEECCCCeEEEE
Confidence 999999999999999877443
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=88.21 E-value=19 Score=32.41 Aligned_cols=111 Identities=7% Similarity=0.060 Sum_probs=57.0
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc--ceeeec---cccceEEEEEecCCCEEEEEeCCCEEEEEcCC
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK--AHKTIQ---ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~ 253 (344)
...+..+.|.+++.+++++ .+|.+. |....+.... .+.... ....+..+.|.+++..+++
T Consensus 280 ~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~------------- 344 (398)
T PLN00033 280 ARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAA------------- 344 (398)
T ss_pred ccceeeeeEcCCCCEEEEe-CCceEE-EecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEE-------------
Confidence 4568899999998877665 456654 3333332111 111111 2234777878776555443
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeec-ccCCCccEEEEEEccCCCEEEEEeCCCcEEEE
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vw 313 (344)
+..|.+.... ..++.-.... ...-...+..+.|.++++.+++ +.+|.|.-|
T Consensus 345 -------G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G~~G~il~~ 396 (398)
T PLN00033 345 -------GGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL-GNDGVLLRY 396 (398)
T ss_pred -------ECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEE-eCCcEEEEe
Confidence 3344444332 2222211111 0111135789998877665554 557876554
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=88.18 E-value=21 Score=32.75 Aligned_cols=61 Identities=11% Similarity=0.106 Sum_probs=39.2
Q ss_pred ecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccc--ee-e--eccccceEEEEEecCC
Q psy15157 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA--HK-T--IQESTFVRCLSFHPCG 235 (344)
Q Consensus 175 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~-~--~~~~~~v~~~~~~~~~ 235 (344)
+...-..-+.|+|.|++.+|++--..|.|++++-.++..... +. . ......+..|+++|+-
T Consensus 25 va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 25 LLSGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred EECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 333445678999999998887765569999998654432111 11 1 1124567889999863
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=87.88 E-value=0.052 Score=48.34 Aligned_cols=131 Identities=18% Similarity=0.224 Sum_probs=84.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEE
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSG 260 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~ 260 (344)
......|.+.+.-++.++.+..+..||-... .. ...........++|+.+|+.+++ .+
T Consensus 36 ~pi~~~w~~e~~nlavaca~tiv~~YD~agq-~~---le~n~tg~aldm~wDkegdvlav------------------lA 93 (615)
T KOG2247|consen 36 GPIIHRWRPEGHNLAVACANTIVIYYDKAGQ-VI---LELNPTGKALDMAWDKEGDVLAV------------------LA 93 (615)
T ss_pred ccceeeEecCCCceehhhhhhHHHhhhhhcc-ee---cccCCchhHhhhhhccccchhhh------------------hh
Confidence 3345678888777888888889999995432 11 11122334556778777766654 56
Q ss_pred eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceee
Q psy15157 261 SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 261 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 335 (344)
-..+.+.+||+.+...-+.-.++... -.-+.|++.+..++.+...|.+.|++..+.+.+....-|.--+.+.+
T Consensus 94 ek~~piylwd~n~eytqqLE~gg~~s--~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~a 166 (615)
T KOG2247|consen 94 EKTGPIYLWDVNSEYTQQLESGGTSS--KSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIA 166 (615)
T ss_pred hcCCCeeechhhhhhHHHHhccCcch--HHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEE
Confidence 67789999998765432221122221 12268999999999999999999999887766555443444444433
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=87.05 E-value=6.6 Score=38.24 Aligned_cols=84 Identities=12% Similarity=0.146 Sum_probs=54.3
Q ss_pred cceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 224 TFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 224 ~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
..+..+.++|+|++|+.+.+. .|+....|++.|+.+++.+.... .+.. ..++|.+|++.|+.
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~--------------~G~E~~~l~v~d~~tg~~l~~~i---~~~~-~~~~w~~D~~~~~y 188 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDF--------------LSRRQYGIRFRNLETGNWYPELL---DNVE-PSFVWANDSWTFYY 188 (686)
T ss_pred EEEeEEEECCCCCEEEEEecC--------------CCcEEEEEEEEECCCCCCCCccc---cCcc-eEEEEeeCCCEEEE
Confidence 346667889999988876443 35555679999998886432221 1111 45899999987765
Q ss_pred EeCC------CcEEEEEcCCC--eeEEEee
Q psy15157 304 SGKD------SLVKLWELSSA--RCLIAYT 325 (344)
Q Consensus 304 ~~~d------g~i~vwd~~~~--~~~~~~~ 325 (344)
...+ ..|+.+++.++ +....|.
T Consensus 189 ~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~ 218 (686)
T PRK10115 189 VRKHPVTLLPYQVWRHTIGTPASQDELVYE 218 (686)
T ss_pred EEecCCCCCCCEEEEEECCCChhHCeEEEe
Confidence 5432 36888899887 3334444
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=87.03 E-value=23 Score=32.06 Aligned_cols=58 Identities=16% Similarity=0.265 Sum_probs=40.3
Q ss_pred CCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccc--cceeeeccccceEEEEEecC
Q psy15157 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVR--KAHKTIQESTFVRCLSFHPC 234 (344)
Q Consensus 177 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~ 234 (344)
...++|.++.|++|.+.++.--.|++|.+++....+.. ...........|....|..+
T Consensus 64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s 123 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS 123 (657)
T ss_pred cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC
Confidence 34569999999999999999999999999997433221 11222223344777778764
|
|
| >smart00564 PQQ beta-propeller repeat | Back alignment and domain information |
|---|
Probab=87.00 E-value=1.7 Score=22.86 Aligned_cols=25 Identities=12% Similarity=0.201 Sum_probs=21.5
Q ss_pred EEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 300 YLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 300 ~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
.++.++.+|.++.+|.++|+.+-++
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5778888999999999999887664
|
Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=86.93 E-value=10 Score=27.97 Aligned_cols=123 Identities=10% Similarity=0.122 Sum_probs=68.6
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc-----ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEE
Q psy15157 184 CLEFHPSAPILASGSKDKTVKMFDYSKSSVRK-----AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYC 258 (344)
Q Consensus 184 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~ 258 (344)
.-.|......|+.++.-|.|.|++........ ......-...|++++-.+- +. +.+...|+
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l---------~~-----~~~~D~Ll 68 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRL---------KP-----DDGRDCLL 68 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEec---------CC-----CCCcCEEE
Confidence 34566666788889999999999876542111 1122222334555443331 10 11334444
Q ss_pred EEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc----CCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR----NGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~----~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.|+ ...+..||+.....+..-. ..+ .|+++.+-. ...++++|+ +..|.-||....+...+..
T Consensus 69 iGt-~t~llaYDV~~N~d~Fyke-~~D--Gvn~i~~g~~~~~~~~l~ivGG-ncsi~Gfd~~G~e~fWtVt 134 (136)
T PF14781_consen 69 IGT-QTSLLAYDVENNSDLFYKE-VPD--GVNAIVIGKLGDIPSPLVIVGG-NCSIQGFDYEGNEIFWTVT 134 (136)
T ss_pred Eec-cceEEEEEcccCchhhhhh-Ccc--ceeEEEEEecCCCCCcEEEECc-eEEEEEeCCCCcEEEEEec
Confidence 554 4568899988765543322 222 377777632 344555554 7778878876666555543
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=86.68 E-value=15 Score=29.60 Aligned_cols=50 Identities=12% Similarity=0.221 Sum_probs=35.0
Q ss_pred CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 132 QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 132 ~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
+.|..+...+.|.+|++.. ...+...++..- +.|..+.++..|++|+|-=
T Consensus 29 d~Lfva~~g~~Vev~~l~~----------------~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQ----------------EECPLLCTFSTV-GRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEccc----------------CCCceeEEEcch-hheeEEEeccccceEEEEE
Confidence 4444445678899999962 233445555433 7899999999999999853
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=86.60 E-value=37 Score=33.93 Aligned_cols=94 Identities=15% Similarity=0.177 Sum_probs=60.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC------CEEEEEeCCCEEEEE----
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG------DYMVVGTDHFVLRLY---- 250 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~l~~~~~~~~i~~~---- 250 (344)
.++....+.+...++.++.++.+...++..+..... ....-...|.|+.++|-| +++++|..+..+.+.
T Consensus 489 ~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~-~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~p 567 (1096)
T KOG1897|consen 489 KITIGVVSANASQVVVAGGGLALFYLEIEDGGLREV-SHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLP 567 (1096)
T ss_pred ceEEEEEeecceEEEEecCccEEEEEEeeccceeee-eeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECC
Confidence 344444455555677777777788778776653222 212234568999999742 378888877666553
Q ss_pred ------------------------cCCCCEEEEEeCCCcEEEE--eCCCCe
Q psy15157 251 ------------------------SSDGRIYCSGSKDGDIKIW--DGVSSK 275 (344)
Q Consensus 251 ------------------------~~~~~~l~~~~~dg~i~iw--d~~~~~ 275 (344)
-.+..+|.++..||.+.-| |..++.
T Consensus 568 d~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~ 618 (1096)
T KOG1897|consen 568 DLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQ 618 (1096)
T ss_pred CcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccce
Confidence 2347889999999998755 444443
|
|
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=86.09 E-value=23 Score=31.00 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=23.9
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCc------EEEEEcCC
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKT------VKMFDYSK 210 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~------i~iwd~~~ 210 (344)
-+.++.+.+.+++..+++.+.+|. +..+++..
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~ 56 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDY 56 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeec
Confidence 456788999977777888888888 66666554
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=85.77 E-value=22 Score=30.62 Aligned_cols=101 Identities=15% Similarity=0.219 Sum_probs=52.5
Q ss_pred cccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEe-CCCCeEE
Q psy15157 222 ESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWD-GVSSKCV 277 (344)
Q Consensus 222 ~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd-~~~~~~~ 277 (344)
....+..+..+++|.+++++........| ++++.+.+.+ ..|.|++=+ ....+.-
T Consensus 143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w 221 (302)
T PF14870_consen 143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETW 221 (302)
T ss_dssp ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE
T ss_pred CcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCcccc
Confidence 44568888889999999998777777666 5565555543 777777766 2222211
Q ss_pred ee--ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 278 AT--FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 278 ~~--~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.. ......+..+..++|.+++...++|+ .|.+ +.....|+.-..-+
T Consensus 222 ~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGktW~~~~ 269 (302)
T PF14870_consen 222 SEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGKTWQKDR 269 (302)
T ss_dssp ---B-TTSS--S-EEEEEESSSS-EEEEES-TT-E-EEESSTTSS-EE-G
T ss_pred ccccCCcccCceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCccceECc
Confidence 11 11112223489999999877777666 4543 34455555544443
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=85.77 E-value=4.4 Score=22.58 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=21.2
Q ss_pred CCCEEEE-EeCCCcEEEEeCCCCeEEeeecc
Q psy15157 253 DGRIYCS-GSKDGDIKIWDGVSSKCVATFSK 282 (344)
Q Consensus 253 ~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~ 282 (344)
+++.+++ .-.++.|.++|..+++.+..+..
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 4444434 44578899999999888877764
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=85.37 E-value=25 Score=30.86 Aligned_cols=56 Identities=7% Similarity=0.046 Sum_probs=29.7
Q ss_pred CcEEEEeCCCCeEEeeeccc--CCCccEEEEEEccCCCEEEEEeCC--------------CcEEEEEcCCCee
Q psy15157 264 GDIKIWDGVSSKCVATFSKA--HDGAEISSLTFTRNGKYLLSSGKD--------------SLVKLWELSSARC 320 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~d--------------g~i~vwd~~~~~~ 320 (344)
..+.+||..+.+-...-... .......+++ ..++++++.|+.. ..+..+|+.+.+-
T Consensus 217 ~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W 288 (341)
T PLN02153 217 NAVQFFDPASGKWTEVETTGAKPSARSVFAHA-VVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVW 288 (341)
T ss_pred CceEEEEcCCCcEEeccccCCCCCCcceeeeE-EECCEEEEECcccCCccccccccccccccEEEEEcCccEE
Confidence 46889998877544321100 1111122222 2256777777742 2578888876654
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=85.30 E-value=39 Score=33.05 Aligned_cols=72 Identities=8% Similarity=-0.050 Sum_probs=42.6
Q ss_pred CceEEEEECCCCCEEEEEeCC-----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 120 SPCRAGAFSIDGQLCATGSVD-----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
-.+..+.+||||++|+.+... ..|++-|+.++.. ....+.+ . -..++|.++++.|
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~-----------------l~~~i~~-~--~~~~~w~~D~~~~ 186 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNW-----------------YPELLDN-V--EPSFVWANDSWTF 186 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCC-----------------CCccccC-c--ceEEEEeeCCCEE
Confidence 346778899999988765432 3477777754210 0011111 1 1458999988744
Q ss_pred -EEEeCC-----CcEEEEEcCCC
Q psy15157 195 -ASGSKD-----KTVKMFDYSKS 211 (344)
Q Consensus 195 -~s~~~d-----g~i~iwd~~~~ 211 (344)
++...+ ..|+.+++.++
T Consensus 187 ~y~~~~~~~~~~~~v~~h~lgt~ 209 (686)
T PRK10115 187 YYVRKHPVTLLPYQVWRHTIGTP 209 (686)
T ss_pred EEEEecCCCCCCCEEEEEECCCC
Confidence 443322 35777888776
|
|
| >PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4 | Back alignment and domain information |
|---|
Probab=85.23 E-value=3.3 Score=28.22 Aligned_cols=42 Identities=10% Similarity=0.224 Sum_probs=29.2
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+..+|.+.-||..+++....+.+-. ..+.|++++|+.+|+.+
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~L~---fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDGLY---FPNGVALSPDESFVLVA 74 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEEES---SEEEEEE-TTSSEEEEE
T ss_pred CCCCcCEEEEECCCCeEEEehhCCC---ccCeEEEcCCCCEEEEE
Confidence 4566889999999998655554333 36899999999987765
|
3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B. |
| >PF01011 PQQ: PQQ enzyme repeat family | Back alignment and domain information |
|---|
Probab=85.18 E-value=3.5 Score=22.78 Aligned_cols=30 Identities=7% Similarity=0.135 Sum_probs=25.2
Q ss_pred EEEEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 300 YLLSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 300 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
.++.++.||.|+-.|.++|+.+-.++....
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~~~ 31 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTGPP 31 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESSSG
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCCCC
Confidence 456679999999999999999999886543
|
; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A .... |
| >PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST) | Back alignment and domain information |
|---|
Probab=84.99 E-value=23 Score=30.50 Aligned_cols=40 Identities=25% Similarity=0.364 Sum_probs=36.5
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.|++|...++|.+|+|.-.-..|.+.|-++|+.+-.+.|.
T Consensus 145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence 3889999999999999999999999999999999999776
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=84.69 E-value=24 Score=30.18 Aligned_cols=72 Identities=10% Similarity=0.105 Sum_probs=47.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-----ccccceeeec-----cccceEEEEEecCCCE------------E
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKS-----SVRKAHKTIQ-----ESTFVRCLSFHPCGDY------------M 238 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~-----~~~~v~~~~~~~~~~~------------l 238 (344)
.-+.|+++|.+.+.++...-+...+||.... .......+.. .....+.+.|+....+ +
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 4578999999998888888899999998611 1111111111 1234666777653332 5
Q ss_pred EEEeCCCEEEEEcC
Q psy15157 239 VVGTDHFVLRLYSS 252 (344)
Q Consensus 239 ~~~~~~~~i~~~~~ 252 (344)
+.++++|+|.-|.|
T Consensus 104 if~tEdGTisaW~p 117 (336)
T TIGR03118 104 LFVTEDGTLSGWAP 117 (336)
T ss_pred EEEeCCceEEeecC
Confidence 67889999999943
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=83.96 E-value=27 Score=35.88 Aligned_cols=32 Identities=13% Similarity=0.247 Sum_probs=28.9
Q ss_pred CccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 286 GAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 286 ~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..+|..+..+.....+.+-++-|+|.+||+..
T Consensus 242 ~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 242 KDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 34799999998888999999999999999976
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=83.76 E-value=9.8 Score=29.68 Aligned_cols=30 Identities=13% Similarity=0.236 Sum_probs=24.7
Q ss_pred cEEEEEEccCC------CEEEEEeCCCcEEEEEcCC
Q psy15157 288 EISSLTFTRNG------KYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 288 ~v~~i~~~~~~------~~l~s~~~dg~i~vwd~~~ 317 (344)
.+.+++|||-| -+|++.+.++.|.||.-..
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 68999999943 3578889999999998763
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >KOG0783|consensus | Back alignment and domain information |
|---|
Probab=83.44 E-value=31 Score=33.85 Aligned_cols=190 Identities=9% Similarity=-0.012 Sum_probs=89.1
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+.|| .|.+++.+.+..+++| .+|.|.-|-++........+......+... -..+.+.+.. .|..++-....
T Consensus 226 L~gh--~~~qisvs~~HslvLT--~~g~Vys~GlN~~hqLG~~~~~~~~~~p~q-I~a~r~kg~~-~iIgvaAg~~h--- 296 (1267)
T KOG0783|consen 226 LIGH--KVIQISVSHTHSLVLT--KFGSVYSWGLNGSHQLGLSNDELKKDDPIQ-ITARRIKGFK-QIIGVAAGKSH--- 296 (1267)
T ss_pred cccc--ceEEEEeecceeEEEe--ecceEEEeecCcccccCCcCchhhcCchhh-hhhHhhcchh-hhhhhhcccce---
Confidence 4556 6889999988777776 589999999875433322221111111000 0011112221 22222222111
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEE-EEec-CCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCL-SFHP-CGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~~~~-~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~ 272 (344)
-.+-.|..|+.|-++.|+.. ...+...|+.- +..+ ....+.+...++.-..+...+.+++-+.....+.-++..
T Consensus 297 sVawt~~~VY~wGlN~GQlG----i~~n~~~Vt~Pr~l~~~~~~v~~v~a~~~ATVc~~~~~~i~~~ady~~~k~~~n~~ 372 (1267)
T KOG0783|consen 297 SVAWTDTDVYSWGLNNGQLG----ISDNISVVTTPRRLAGLLSPVIHVVATTRATVCLLQNNSIIAFADYNQVKLPFNVD 372 (1267)
T ss_pred eeeeecceEEEecccCceec----CCCCCceeecchhhcccccceEEEEecCccEEEEecCCcEEEEecccceecCcchh
Confidence 11223567899999887643 11121112211 1111 223333333344333344466666666666666656655
Q ss_pred CCeEEeeecccCCCccEEEE-EEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 273 SSKCVATFSKAHDGAEISSL-TFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 273 ~~~~~~~~~~~~~~~~v~~i-~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
..+.+.... ++-...+..+ ........|+.-.+-|.|+.|+-.+.
T Consensus 373 ~lks~~V~g-g~l~~~~~~~~k~~a~~~kll~lte~g~Vy~w~s~ns 418 (1267)
T KOG0783|consen 373 FLKSLKVTG-GPLSLTRFNVRKLLASENKLLVLTELGEVYEWDSKNS 418 (1267)
T ss_pred ccceeEEec-CccchhhhhhhhcchhhhheeeeccCCeEEEEecCCC
Confidence 555544332 2211111000 01112234666667788999986543
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=83.16 E-value=22 Score=33.07 Aligned_cols=123 Identities=11% Similarity=0.031 Sum_probs=58.9
Q ss_pred CCCEEEEEeCCC-----cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC--EEEEE------------
Q psy15157 190 SAPILASGSKDK-----TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF--VLRLY------------ 250 (344)
Q Consensus 190 ~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~i~~~------------ 250 (344)
++.+++.|+.++ .+..||..+++................+ .-+|...++|+.++ .+..|
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v--~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV--PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS 348 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE--EECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence 345667777543 4667887765432222111111111112 23566666666432 34444
Q ss_pred -----------cCCCCEEEEEeCCC---cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 -----------SSDGRIYCSGSKDG---DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.-+|++++.|+.++ .+..||.++.+....-...........+. -+|+..+.|+ .+.+||..
T Consensus 349 l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~--~~~~IYv~GG---~~e~ydp~ 423 (480)
T PHA02790 349 LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALV--FGRRLFLVGR---NAEFYCES 423 (480)
T ss_pred CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEE--ECCEEEEECC---ceEEecCC
Confidence 22456667776553 36678877665433211111111112222 3566666664 46678776
Q ss_pred CCe
Q psy15157 317 SAR 319 (344)
Q Consensus 317 ~~~ 319 (344)
+++
T Consensus 424 ~~~ 426 (480)
T PHA02790 424 SNT 426 (480)
T ss_pred CCc
Confidence 654
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=83.01 E-value=52 Score=32.70 Aligned_cols=184 Identities=15% Similarity=0.086 Sum_probs=89.2
Q ss_pred cCCCceEEEEEC---C--C--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC---CcCCeEEEE
Q psy15157 117 SHKSPCRAGAFS---I--D--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD---HIEEVTCLE 186 (344)
Q Consensus 117 ~h~~~v~~~~~s---~--~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~ 186 (344)
.-..+|..|+|+ . + .++|++ -....+.|+...-........ .....-...++..+.. -..+..+++
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~V-rt~~st~I~~p~~~~~~~~~~---~~~s~i~~~~l~~i~~~~tgg~~~aDv~ 152 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAV-RTETSTTILRPEYHRVISSIR---SRPSRIDPNPLLTISSSDTGGFPHADVA 152 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEE-EcCCEEEEEEccccccccccc---CCccccccceeEEechhhcCCCccceEE
Confidence 567899999998 2 1 235444 456778888743211100000 0000111223334432 234678999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEEcCCCccc--cceeeec-cccceEEEEEecCCCEEEEEeCCCE-EEEEcCCCCEEEEEe
Q psy15157 187 FHPS-APILASGSKDKTVKMFDYSKSSVR--KAHKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFV-LRLYSSDGRIYCSGS 261 (344)
Q Consensus 187 ~~~~-~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~-i~~~~~~~~~l~~~~ 261 (344)
|+|. ...||.....|...|||+...... ....... ..+.+ .+++... ++- -..|..+-+.|+.++
T Consensus 153 FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi---~~d~~e~-------s~w~rI~W~~~~~~lLv~~ 222 (765)
T PF10214_consen 153 FNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSI---IFDPEEL-------SNWKRILWVSDSNRLLVCN 222 (765)
T ss_pred eccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccc---cCCCccc-------CcceeeEecCCCCEEEEEc
Confidence 9994 458999999999999999221111 1111000 00111 1111111 111 123445555554443
Q ss_pred CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC--CCEEEEEeCCCcEEEEEcCC
Q psy15157 262 KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN--GKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 262 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~vwd~~~ 317 (344)
...+.++|+.+......+.......+|..+.-+|+ +..++..+ ..|...++..
T Consensus 223 -r~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs--~eiiw~~~~~ 277 (765)
T PF10214_consen 223 -RSKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTS--KEIIWLDVKS 277 (765)
T ss_pred -CCceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEec--CeEEEEEccC
Confidence 34577888877655331222323346777777665 22222221 3455555554
|
These proteins are found in fungi. |
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=80.58 E-value=64 Score=32.10 Aligned_cols=111 Identities=11% Similarity=0.082 Sum_probs=64.2
Q ss_pred CceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.+.-+++|+| +.+.||.....|.-.||++........ ....... ...+....... ..+.-..+.|.++.+.|+.++
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~-~~~~~~~-~~~gsi~~d~~-e~s~w~rI~W~~~~~~lLv~~ 222 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKS-SNLRLSR-NISGSIIFDPE-ELSNWKRILWVSDSNRLLVCN 222 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCC-cceeecc-CCCccccCCCc-ccCcceeeEecCCCCEEEEEc
Confidence 3677899998 566999999999999999921110000 0000000 00000000000 113345788988888787776
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecC
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 234 (344)
. ..+.++|+.+......+........|..+.-++.
T Consensus 223 r-~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~ 257 (765)
T PF10214_consen 223 R-SKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPD 257 (765)
T ss_pred C-CceEEEECCCCCccchhccCCChhheeeEEecCC
Confidence 5 6788999988754332222334566888877775
|
These proteins are found in fungi. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 344 | ||||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 1e-16 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 2e-16 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 2e-16 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 4e-16 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 4e-16 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 4e-16 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 4e-16 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 4e-16 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 5e-16 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 5e-16 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 5e-16 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 5e-16 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 5e-16 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 5e-16 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 5e-16 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 5e-16 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 1e-15 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 1e-11 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-11 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 5e-04 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 4e-11 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 1e-09 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 2e-09 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 2e-09 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 3e-09 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 3e-09 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 6e-08 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 3e-07 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 5e-07 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 9e-07 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 1e-06 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 2e-06 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 2e-05 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 2e-06 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 2e-05 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 5e-06 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 1e-05 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 1e-05 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 1e-05 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 1e-05 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 1e-05 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 1e-05 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 2e-05 | ||
| 1gxr_A | 337 | Wd40 Region Of Human Groucho/tle1 Length = 337 | 2e-05 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 3e-05 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 1e-04 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 2e-04 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 3e-04 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 4e-04 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 5e-04 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 4e-04 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 5e-04 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 9e-04 |
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 344 | |||
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.98 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.98 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.98 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.98 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.98 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.98 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.97 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.97 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.97 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.97 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.97 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.97 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.97 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.97 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.97 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.97 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.97 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.97 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.97 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.97 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.97 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.97 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.97 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.97 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.97 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.96 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.96 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.96 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.96 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.96 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.96 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.96 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.96 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.96 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.96 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.96 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.96 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.96 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.96 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.96 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.96 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.96 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.96 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.96 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.96 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.96 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.96 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.96 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.96 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.96 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.96 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.96 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.95 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.95 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.95 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.95 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.95 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.95 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.95 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.95 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.95 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.95 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.95 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.95 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.95 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.95 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.95 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.95 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.95 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.95 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.95 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.95 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.94 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.94 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.94 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.94 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.94 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.93 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.93 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.93 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.93 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.92 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.92 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.92 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.91 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.9 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.9 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.89 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.88 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.87 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.87 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.87 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.84 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.84 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.83 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.83 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.81 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.8 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.79 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.79 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.78 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.78 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.78 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.78 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.78 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.78 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.76 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.76 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.75 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.74 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.74 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.73 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.73 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.72 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.72 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.71 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.71 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.7 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.69 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.69 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.67 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.67 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.66 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.66 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.63 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.63 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.63 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.62 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.62 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.62 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.59 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.58 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.58 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.57 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.56 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.55 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.52 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.51 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.5 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.49 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.47 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.47 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.44 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.43 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.42 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.39 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.39 | |
| 2xz2_A | 66 | CSTF-50, isoform B; RNA-binding protein, 3' END mR | 99.39 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.39 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.37 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.36 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.35 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.35 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.35 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.35 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.33 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.33 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.33 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.29 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.28 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.26 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.26 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.25 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.25 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.24 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.22 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.22 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.2 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.17 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.16 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.14 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.09 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.09 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.07 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.04 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.03 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.01 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.01 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.0 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.93 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.93 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.93 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.9 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 98.84 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.8 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.76 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.73 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.68 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.65 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.65 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.64 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.62 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.61 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.6 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.56 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.5 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.5 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.46 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.44 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.44 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.4 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.32 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 98.27 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.27 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.22 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.22 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.21 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.19 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.18 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.17 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.16 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.16 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 98.14 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.1 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.1 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.02 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.01 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.99 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.97 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.95 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.92 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 97.91 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.87 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 97.84 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.82 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.82 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.8 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.79 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 97.74 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 97.73 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.71 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.7 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.65 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.65 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.65 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.61 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.59 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.57 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.49 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.49 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 97.45 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.45 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.34 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.26 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.26 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.23 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.1 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.09 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.08 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.03 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 96.97 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 96.95 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.94 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 96.94 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.93 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 96.88 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.8 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 96.68 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 96.63 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 96.62 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 96.62 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 96.6 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 96.6 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.55 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.45 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 96.45 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 96.43 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 96.37 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 96.35 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.17 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.12 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 95.84 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 95.83 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 95.73 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 95.72 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 95.72 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.7 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.66 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 95.65 | |
| 2xtc_A | 90 | F-box-like/WD repeat-containing protein TBL1X; tra | 95.41 | |
| 1uuj_A | 88 | Platelet-activating factor acetylhydrolase IB ALP | 95.37 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 95.31 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.22 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 94.9 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 94.81 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 94.77 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 94.69 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 94.68 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 94.55 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 94.51 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 94.3 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 94.24 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 94.1 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 94.02 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 93.92 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 93.88 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 93.72 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 93.59 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 93.35 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 93.1 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 93.1 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 92.85 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 92.77 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 92.73 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 92.36 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 92.27 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 91.42 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 90.97 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 90.73 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 89.51 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 88.32 | |
| 4fhn_B | 1139 | Nucleoporin NUP120; protein complex,structural pro | 87.23 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 84.2 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 80.34 |
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=283.39 Aligned_cols=302 Identities=23% Similarity=0.352 Sum_probs=183.8
Q ss_pred HHhHHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcccccccCCCC-CCccchhcccCCCc
Q psy15157 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPDRMKRMEPSI-GLNPIQEILIGPGL 92 (344)
Q Consensus 14 ~~~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 92 (344)
.+|+.++++++.++|..+|+.+++..++.+.+.............++.+.+.......++..... ......+. +..+.
T Consensus 5 ~~q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ 83 (410)
T 1vyh_C 5 QRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEE-FTSGG 83 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHhCCCCCcchhhhhhchhhhhhhheeeHHHHHHHHHHHHHHHHHH-HhccC
Confidence 57899999999999999999999999988875432211111222333322211111000000000 00000000 01110
Q ss_pred eeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceE
Q psy15157 93 DLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVI 172 (344)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (344)
....... +....+.......+.+|.++|++++|+|++.+|++|+.||+|+|||+.+ ....
T Consensus 84 ~~~~~~~--~~~~~~~~~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~------------------~~~~ 143 (410)
T 1vyh_C 84 PLGQKRD--PKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET------------------GDFE 143 (410)
T ss_dssp ----------CCCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTT------------------CCCC
T ss_pred CccccCC--ccccccCCCceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------------------CcEE
Confidence 0000001 1111112223456789999999999999999999999999999999864 3456
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-- 250 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-- 250 (344)
..+.+|.+.|.+++|+|++++|++|+.||+|++||+.+++....+ ..|...|.+++|+|+++++++|+.|+.+++|
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~--~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM--HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC--CCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE--cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 788999999999999999999999999999999999887654433 4678889999999999999999999999999
Q ss_pred ---------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC------------
Q psy15157 251 ---------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN------------ 297 (344)
Q Consensus 251 ---------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~------------ 297 (344)
++++.++++|+.|+.|++||++++++...+. .|. ..|.+++|+|+
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~-~~v~~~~~~~~~~~~~~~~~~~~ 299 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHR-HVVECISWAPESSYSSISEATGS 299 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECCSCGGGGGGGCCSC
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCC-ceEEEEEEcCcccccchhhhccc
Confidence 5788999999999999999999999888886 344 46999999996
Q ss_pred --------CCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 298 --------GKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 298 --------~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
|.+|++|+.|+.|++||+++++++..+.+|...... +.+++++
T Consensus 300 ~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~--v~~~~~g 350 (410)
T 1vyh_C 300 ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG--VLFHSGG 350 (410)
T ss_dssp C-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE--EEECSSS
T ss_pred cccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEE--EEEcCCC
Confidence 679999999999999999999999999998765444 4445544
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=251.88 Aligned_cols=216 Identities=19% Similarity=0.304 Sum_probs=182.7
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCC------------------------CCCcCCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMES------------------------SEPQNDQQ 167 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~------------------------~~~~~~~~ 167 (344)
...+.+|.+.|++++|+|++++|++|+.||+|++||+.+......... ....++..
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 456889999999999999999999999999999999987543222111 01123445
Q ss_pred CCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCE
Q psy15157 168 GHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFV 246 (344)
Q Consensus 168 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~ 246 (344)
....+..+.+|.+.|.+++|+|++++|++|+.||+|++||++++.... .....|...|.+++|+| ++.++++|+.|+.
T Consensus 86 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE-EEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh-hhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 567788899999999999999999999999999999999998763321 23356888999999999 6789999999999
Q ss_pred EEEEc--------------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 247 LRLYS--------------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 247 i~~~~--------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
|++|+ +++.++++|+.|+.|++||+++++++..+. .|. ..|.+++|+|++++
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~h~-~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHM-SNVSFAVFHPTLPI 242 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE-CCS-SCEEEEEECSSSSE
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC-CCC-CCEEEEEECCCCCE
Confidence 99992 367899999999999999999999999887 444 46999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 301 LLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
|++|+.||.|++||+++++++..+..+...
T Consensus 243 l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~ 272 (304)
T 2ynn_A 243 IISGSEDGTLKIWNSSTYKVEKTLNVGLER 272 (304)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCSSSS
T ss_pred EEEEcCCCeEEEEECCCCceeeeccCCCcc
Confidence 999999999999999999999999877544
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=244.64 Aligned_cols=212 Identities=18% Similarity=0.275 Sum_probs=180.8
Q ss_pred eeEEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+.+|.+.|++++|+|++ ++|+||+.|++|++|++..... ....++..+.+|...|.+++|+|+
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-------------~~~~~~~~~~~h~~~v~~~~~s~d 76 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-------------KFGVPVRSFKGHSHIVQDCTLTAD 76 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-------------EEEEEEEEEECCSSCEEEEEECTT
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-------------cccccceEEeCCcccEEEEEECCC
Confidence 45678999999999999965 8999999999999999853210 113456788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS------------------ 252 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~------------------ 252 (344)
+.+|++|+.|++|++||+.+++... ....|...|.+++|+|++.++++|+.|+.+++|+.
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQV 154 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEE
Confidence 9999999999999999999886543 33568889999999999999999999999999932
Q ss_pred ----------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 253 ----------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 253 ----------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
++..+++++.|+.|++||+++.+....+. .|. ..|++++|+|+|++|++|+.||.|++||+++++++.
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~-~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHN-SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232 (319)
T ss_dssp EECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-CCC-SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-CCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34589999999999999999999888876 444 479999999999999999999999999999999999
Q ss_pred EeecCCCcCceeeeeeeccCC
Q psy15157 323 AYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+..+. ....+.|++++.
T Consensus 233 ~~~~~~---~v~~~~~sp~~~ 250 (319)
T 3frx_A 233 TLSAQD---EVFSLAFSPNRY 250 (319)
T ss_dssp EEECCS---CEEEEEECSSSS
T ss_pred EecCCC---cEEEEEEcCCCC
Confidence 998754 356667776653
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=239.67 Aligned_cols=207 Identities=29% Similarity=0.468 Sum_probs=182.5
Q ss_pred ccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 109 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
......+.+|.+.|++++|+|++++|++|+.||.|++|+..+ ......+.+|...|.+++|+
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~------------------~~~~~~~~~h~~~v~~~~~~ 74 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD------------------GKFEKTISGHKLGISDVAWS 74 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------CCEEEEECCCSSCEEEEEEC
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC------------------cccchhhccCCCceEEEEEc
Confidence 344567889999999999999999999999999999999853 45567888999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
|++++|++|+.||.|++||+.+++.... ...|...|.+++|+|++.++++|+.|+.+++|
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v 152 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 152 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCCCEEEEECCCCEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE
Confidence 9999999999999999999998865443 34578889999999999999999999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
++++.++++++.||.|++||+++++.+..+...+. ..+..++|+|++++|++++.||.|++||+++++++..+.
T Consensus 153 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSC-CCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCC-CceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEE
Confidence 68899999999999999999999988877764443 569999999999999999999999999999999999999
Q ss_pred cCCCcCceeee
Q psy15157 326 GAGSMGQQFEL 336 (344)
Q Consensus 326 ~~~~~~~~~~~ 336 (344)
+|.........
T Consensus 232 ~~~~~~~~~~~ 242 (312)
T 4ery_A 232 GHKNEKYCIFA 242 (312)
T ss_dssp SSCCSSSCCCE
T ss_pred ecCCceEEEEE
Confidence 88765444433
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=239.67 Aligned_cols=212 Identities=19% Similarity=0.286 Sum_probs=171.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--C
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS--A 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~ 191 (344)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.. .....+.++.+|.+.|.+++|+++ +
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~----------------~~~~~~~~l~gH~~~V~~v~~s~~~~g 67 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEG----------------ETHKLIDTLTGHEGPVWRVDWAHPKFG 67 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCS----------------SCBCCCEEECCCSSCEEEEEECCGGGC
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCC----------------CCcEEEEEEccccCCeEEEEecCCCcC
Confidence 4679999999999999999999999999999999853 123456788999999999999864 7
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEEc------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~~------------------ 251 (344)
++|+||+.||+|++||+++++.........|...|.+++|+|+ |.+|++++.|+.+++|+
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~ 147 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC
T ss_pred CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc
Confidence 8999999999999999988754333444567888999999997 89999999999999983
Q ss_pred -------CC-------------CCEEEEEeCCCcEEEEeCCCCe----EEeeecccCCCccEEEEEEccCC---CEEEEE
Q psy15157 252 -------SD-------------GRIYCSGSKDGDIKIWDGVSSK----CVATFSKAHDGAEISSLTFTRNG---KYLLSS 304 (344)
Q Consensus 252 -------~~-------------~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~i~~~~~~---~~l~s~ 304 (344)
|+ +++|++|+.|+.|++||+++++ ....+. .|. ..|.+++|+|++ ++|+++
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~-~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHS-DWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCS-SCEEEEEECCCCSSSEEEEEE
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCC-CceEEEEECCCCCCceEEEEE
Confidence 22 4689999999999999998765 445554 454 479999999984 899999
Q ss_pred eCCCcEEEEEcCCCe---eEEEeecCCCcCceeeeeeeccCC
Q psy15157 305 GKDSLVKLWELSSAR---CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+.|++|++||++++. ....+..+........+.|+++++
T Consensus 226 s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (297)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC
Confidence 999999999998753 222332233344566677777664
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=240.74 Aligned_cols=212 Identities=19% Similarity=0.357 Sum_probs=183.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|++|+.||+|+|||+.+ ...+..+..|...|.+++|+|+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~------------------~~~~~~~~~~~~~v~~~~~s~~ 108 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT------------------TNKVHAIPLRSSWVMTCAYAPS 108 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT------------------CCEEEEEECSSSCEEEEEECTT
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC------------------CCcceEeecCCccEEEEEECCC
Confidence 4567899999999999999999999999999999999853 4456778889999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcc--ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSV--RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
+++|++|+.|+.|++||+.+... ........|...+.++.|++++. +++++.|+.+++|
T Consensus 109 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v 187 (340)
T 1got_B 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCce
Confidence 99999999999999999987532 12223456788999999998765 8899999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+|++.++++|+.|+.|++||+++++++..+. .|. ..|++++|+|++++|++|+.||.|++||+++++.+..+.
T Consensus 188 ~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~-~h~-~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 265 (340)
T 1got_B 188 MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT-GHE-SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc-CCc-CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 6789999999999999999999999988886 444 469999999999999999999999999999999998887
Q ss_pred cCCCcCceeeeeeeccCC
Q psy15157 326 GAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~ 343 (344)
.+........+.+++++.
T Consensus 266 ~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 266 HDNIICGITSVSFSKSGR 283 (340)
T ss_dssp CTTCCSCEEEEEECTTSS
T ss_pred cCCcccceEEEEECCCCC
Confidence 655555566777777664
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=251.39 Aligned_cols=207 Identities=25% Similarity=0.466 Sum_probs=182.4
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|++++|++|+.|++|++||+.+ ...+..+.+|...|.+++|+|++
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~------------------~~~~~~~~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG------------------FECIRTMHGHDHNVSSVSIMPNG 204 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS------------------SCEEECCCCCSSCEEEEEECSSS
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC------------------CceeEEEcCCCCCEEEEEEeCCC
Confidence 456789999999999999999999999999999999853 45677889999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------- 251 (344)
.+|++|+.|++|++||++++.....+ ..|...|.++.++|++.++++|+.|+.+++|+
T Consensus 205 ~~l~s~s~D~~i~~wd~~~~~~~~~~--~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~ 282 (410)
T 1vyh_C 205 DHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 282 (410)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEE--eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE
Confidence 99999999999999999988655433 46788899999999999999999999999992
Q ss_pred ---CC--------------------CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC
Q psy15157 252 ---SD--------------------GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 252 ---~~--------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
|+ |.++++|+.|+.|++||+++++++..+. .|. ..|++++|+|+|++|++|+.||
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~-~h~-~~v~~v~~~~~g~~l~s~s~D~ 360 (410)
T 1vyh_C 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-GHD-NWVRGVLFHSGGKFILSCADDK 360 (410)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE-CCS-SCEEEEEECSSSSCEEEEETTT
T ss_pred EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE-CCC-CcEEEEEEcCCCCEEEEEeCCC
Confidence 32 6789999999999999999999998887 444 4799999999999999999999
Q ss_pred cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 309 LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 309 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.|++||+++++++..+.+|.... .++.+++++
T Consensus 361 ~i~vwd~~~~~~~~~~~~h~~~v--~~l~~~~~~ 392 (410)
T 1vyh_C 361 TLRVWDYKNKRCMKTLNAHEHFV--TSLDFHKTA 392 (410)
T ss_dssp EEEEECCTTSCCCEEEECCSSCE--EEEEECSSS
T ss_pred eEEEEECCCCceEEEEcCCCCcE--EEEEEcCCC
Confidence 99999999999999999887654 445555554
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=239.69 Aligned_cols=206 Identities=20% Similarity=0.372 Sum_probs=181.9
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|...|.+++|++++.++++|+.|++|++||+.+ ...+..+..|...+.+++|+|+++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~------------------~~~~~~~~~~~~~~~~~~~spdg~ 135 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN------------------GKQIKSIDAGPVDAWTLAFSPDSQ 135 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT------------------TEEEEEEECCTTCCCCEEECTTSS
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC------------------CCEEEEEeCCCccEEEEEECCCCC
Confidence 45789999999999999999999999999999999964 455677788889999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------- 250 (344)
+|++|+.||.|++||+.+++... ....+...+.+++|+|+|++|++|+.|+.+++|
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~--~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 213 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEY--SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 213 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEE--EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEE
T ss_pred EEEEEcCCCcEEEEEcCCCceeE--EecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEE
Confidence 99999999999999999876543 334567789999999999999999999999998
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
+|++++|++|+.|+.|++||+++++....+. .|. ..|.+++|+|++++|++++.|+.|++||+++++++.++.+|..
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~-~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~ 291 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLS-GHA-SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD 291 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCcceeEEEc-CCC-CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC
Confidence 7899999999999999999999999888886 444 4699999999999999999999999999999999999998865
Q ss_pred cCceeeeeeeccC
Q psy15157 330 MGQQFELTLTVDA 342 (344)
Q Consensus 330 ~~~~~~~~~~~~~ 342 (344)
.. ..+.+++++
T Consensus 292 ~v--~~v~~s~~g 302 (321)
T 3ow8_A 292 QV--WGVKYNGNG 302 (321)
T ss_dssp CE--EEEEECTTS
T ss_pred cE--EEEEECCCC
Confidence 54 445555554
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=238.73 Aligned_cols=213 Identities=16% Similarity=0.285 Sum_probs=181.4
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|+||+.||+|+|||..+ ......+..|...|.+++|+|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~------------------~~~~~~~~~~~~~v~~~~~sp~ 117 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT------------------TNKEHAVTMPCTWVMACAYAPS 117 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCEEEEEECSSSCCCEEEECTT
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------CCcceEEecCCCCEEEEEECCC
Confidence 4567899999999999999999999999999999999853 3445667788999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcc----ccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSV----RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------- 250 (344)
+..|++|+.|+.+++|++..... ........|...|.+++|+|++..+++++.|+.+++|
T Consensus 118 g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 118 GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 99999999999999999865321 1223344688899999999999999999999999999
Q ss_pred ---------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 251 ---------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ---------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
+++|.++++|+.||.|++||+++++++..+. .|. ..|++++|+|++++|++|+.|++|++||+++++.+
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-~h~-~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-THE-SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCC-CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 2357899999999999999999999988886 444 46999999999999999999999999999999998
Q ss_pred EEeecCCCcCceeeeeeeccCC
Q psy15157 322 IAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..+..+........+.+++++.
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGR 297 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSS
T ss_pred EEEcCCCcccceeEEEEeCCCC
Confidence 8887665544555666666653
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=241.20 Aligned_cols=207 Identities=24% Similarity=0.363 Sum_probs=176.5
Q ss_pred EEecCCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 114 YVTSHKSPCRAGAFSID----GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~----~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.+.+|.+.|++++|+++ +.+|+||+.|++|+||++... .......+.+|...|.+++|++
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~----------------~~~~~~~l~gh~~~v~~~~~~~ 90 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE----------------RLDLQWSLEGHQLGVVSVDISH 90 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT----------------EEEEEEEECCCSSCEEEEEECS
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC----------------CeeeeeeeccCCCCEEEEEECC
Confidence 34689999999999974 679999999999999998531 1233457889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
++.++++++.|++|++||+.+++....+ ..+...+.+++|+|+++++++|+.++.+++|
T Consensus 91 ~~~~l~s~s~D~~i~lWd~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~ 168 (321)
T 3ow8_A 91 TLPIAASSSLDAHIRLWDLENGKQIKSI--DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 168 (321)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEE--ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCCEEEEE--eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEE
Confidence 9999999999999999999988654433 3466678899999999999999999999988
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|+|++|++|+.||.|++||+++++.+..+. .|. ..|.+++|+|++++|++|+.|+.|++||+++++++..+.+
T Consensus 169 ~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~-~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 246 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GHA-MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 246 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCS-SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-ccC-CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC
Confidence 6899999999999999999999999998886 444 4699999999999999999999999999999999999998
Q ss_pred CCCcCceeeeeeeccC
Q psy15157 327 AGSMGQQFELTLTVDA 342 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (344)
|.... ..+.+++++
T Consensus 247 h~~~v--~~~~~sp~~ 260 (321)
T 3ow8_A 247 HASWV--LNVAFCPDD 260 (321)
T ss_dssp CSSCE--EEEEECTTS
T ss_pred CCCce--EEEEECCCC
Confidence 87654 444555554
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=238.92 Aligned_cols=206 Identities=16% Similarity=0.234 Sum_probs=167.9
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
...|...|++++|++++ .|++|+.||+|+|||+.++... ......+.+|.+.|++++|+|++++|
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~--------------~~~~~~~~~H~~~V~~v~~spdg~~l 142 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETL--------------IVSKFCKYEHDDIVSTVSVLSSGTQA 142 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSC--------------EEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCce--------------eEeeccccCCCCCEEEEEECCCCCEE
Confidence 34677899999999985 6889999999999999753111 11233456899999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE-----------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~----------------------- 250 (344)
++|+.||+|++||+.+++.... ...|...|++++|+|++. ++++|+.|+.|++|
T Consensus 143 ~sgs~d~~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 220 (344)
T 4gqb_B 143 VSGSKDICIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSL 220 (344)
T ss_dssp EEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceee
Confidence 9999999999999999865543 356889999999999885 68899999999999
Q ss_pred --cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 --SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG-KYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 --~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+| +++++++|+.||.|++||+++++++..+. .|. ..|++++|+|++ ++|++|+.|++|+|||+++++++ .+.+
T Consensus 221 ~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~-~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~ 297 (344)
T 4gqb_B 221 AWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHS-QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQA 297 (344)
T ss_dssp EECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECC
T ss_pred eecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCC-CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcC
Confidence 34 56789999999999999999999998887 444 469999999998 57999999999999999998765 5677
Q ss_pred CCCcCceeeeeeeccC
Q psy15157 327 AGSMGQQFELTLTVDA 342 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (344)
|... ..++.|++++
T Consensus 298 H~~~--V~~v~~sp~~ 311 (344)
T 4gqb_B 298 HRDF--VRDATWSPLN 311 (344)
T ss_dssp CSSC--EEEEEECSSS
T ss_pred CCCC--EEEEEEeCCC
Confidence 7654 4455556554
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=238.70 Aligned_cols=188 Identities=21% Similarity=0.290 Sum_probs=159.1
Q ss_pred eeEEecCCC-ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKS-PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~-~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+.+|.+ .|++++|+|+|++||+|+.|++|+|||+.+.... .......+|...|.+++|+|+
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~---------------~~~~~~~~h~~~v~~~~~sp~ 72 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI---------------CKSVLSEGHQRTVRKVAWSPC 72 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE---------------EEEEECSSCSSCEEEEEECTT
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce---------------eeeeeccccCCcEEEEEECCC
Confidence 456789988 9999999999999999999999999998632100 012234689999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|++|+.|++|++||+..+..........|...|.+++|+|++++|++|+.|+.+++|
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~ 152 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD 152 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC
Confidence 999999999999999999876543344455688899999999999999999999999998
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEE--eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCV--ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+|++.+|++|+.|+.|++||.++++.. ..+. .|. ..|.+++|+|+|++|++|+.|++|++||..
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~-~h~-~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLE-GHE-STVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEec-CCC-CceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 578899999999999999999887643 4554 444 479999999999999999999999999974
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-32 Score=237.46 Aligned_cols=186 Identities=20% Similarity=0.260 Sum_probs=157.8
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|.+.|++++|+|+|++|++|+.|++|++||+.+ ...+..+.+|.+.|.+++|++++.
T Consensus 121 ~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~------------------~~~~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 121 FCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ------------------QVVLSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEECSSCT
T ss_pred ccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEEcCcCCceEEEEecCCCC
Confidence 34568999999999999999999999999999999954 567888999999999999999885
Q ss_pred -EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC-CCEEEEEeCCCEEEEE--------------------
Q psy15157 193 -ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 193 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~-------------------- 250 (344)
+|++|+.||+|++||+++++....+....+...+.+++|+|+ +.++++|+.|+.|++|
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~ 262 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG 262 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE
T ss_pred CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE
Confidence 789999999999999999876665555556677999999995 5688899999999998
Q ss_pred ---cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCe
Q psy15157 251 ---SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 ---~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~vwd~~~~~ 319 (344)
+|++ ++|++|+.|++|+|||++++++.. +. .|. ..|++++|+|+++ +|++||.|++|++|++.+..
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~-~H~-~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQ-AHR-DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEEE-EC-CCS-SCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-Ec-CCC-CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 6777 579999999999999999998764 33 555 4699999999886 56789999999999997754
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=233.80 Aligned_cols=213 Identities=19% Similarity=0.277 Sum_probs=170.8
Q ss_pred ceeEEecCCCceEEEEE-----CC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEE
Q psy15157 111 ETAYVTSHKSPCRAGAF-----SI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC 184 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~-----s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 184 (344)
....+.+|.+.|++++| ++ ++++|+||+.|++|++||+.+.... .........+.+|...|.+
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~-----------~~~~~~~~~l~~h~~~V~~ 81 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQN-----------GYFGIPHKALTGHNHFVSD 81 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCS-----------SBSEEEEEEECCCSSCEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcc-----------cccccccchhccCCCceEE
Confidence 34568899999999999 76 8999999999999999998642100 0123456788999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC------------
Q psy15157 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS------------ 252 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~------------ 252 (344)
++|+|++.++++|+.|++|++||+++++.... ...|...|.+++|+|+++++++++.|+.+++|+.
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTT
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeeccc
Confidence 99999999999999999999999998865433 3568889999999999999999999999999942
Q ss_pred -------------CC----------CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCc
Q psy15157 253 -------------DG----------RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309 (344)
Q Consensus 253 -------------~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~ 309 (344)
++ .++++++.|+.|++|| ...+....+. .|. ..|.+++|+|+|++|++|+.||.
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~-~h~-~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFK-AHE-SNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEE-CCS-SCEEEEEECTTSSEEEEEETTCE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEc-Ccc-ccceEEEECCCCCEEEEEcCCCe
Confidence 22 6899999999999999 4556666665 444 47999999999999999999999
Q ss_pred EEEEEcCC-CeeEEEeecCCCcCceeeeeeeccC
Q psy15157 310 VKLWELSS-ARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 310 i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
|++||+.+ ......+... . ....+.+++++
T Consensus 237 v~iwd~~~~~~~~~~~~~~-~--~v~~v~~sp~~ 267 (343)
T 2xzm_R 237 LLIWDILNLTYPQREFDAG-S--TINQIAFNPKL 267 (343)
T ss_dssp EEEEESSCCSSCSEEEECS-S--CEEEEEECSSS
T ss_pred EEEEECCCCcccceeecCC-C--cEEEEEECCCC
Confidence 99999954 4444454322 2 24455555554
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=233.45 Aligned_cols=214 Identities=21% Similarity=0.286 Sum_probs=181.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+..|...|.+++|+|+++++++|+.|+.|++|++.+.. ........+.+|.+.|.++.|+++
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~--------------~~~~~~~~~~~h~~~v~~~~~~~~ 154 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE--------------GNVRVSRELAGHTGYLSCCRFLDD 154 (340)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS--------------BSCEEEEEEECCSSCEEEEEEEET
T ss_pred cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC--------------CcceeEEEecCCCccEEEEEECCC
Confidence 345678899999999999999999999999999999986421 122456678899999999999987
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+. +++++.|++|++||+.+++.... ...|...|.+++|+|++.++++|+.|+.+++|
T Consensus 155 ~~-l~s~s~d~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~ 231 (340)
T 1got_B 155 NQ-IVTSSGDTTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231 (340)
T ss_dssp TE-EEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE
T ss_pred Cc-EEEEECCCcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEE
Confidence 74 88999999999999998865433 34678899999999999999999999999999
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+|++.+|++|+.||.|++||+++++.+..+........|.+++|+|+|++|++|+.||.|++||+.+++.+..+.+|
T Consensus 232 v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h 311 (340)
T 1got_B 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecC
Confidence 68999999999999999999999988777653322246999999999999999999999999999999999999998
Q ss_pred CCcCceeeeeeeccCC
Q psy15157 328 GSMGQQFELTLTVDAD 343 (344)
Q Consensus 328 ~~~~~~~~~~~~~~~~ 343 (344)
..... ++.+++++.
T Consensus 312 ~~~v~--~~~~s~dg~ 325 (340)
T 1got_B 312 DNRVS--CLGVTDDGM 325 (340)
T ss_dssp SSCEE--EEEECTTSS
T ss_pred CCcEE--EEEEcCCCC
Confidence 76544 455556543
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-31 Score=250.48 Aligned_cols=224 Identities=19% Similarity=0.350 Sum_probs=178.7
Q ss_pred CCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccc
Q psy15157 76 PSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKS 155 (344)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~ 155 (344)
.++.++|.+..++.+........+.. .......+.+|.+.|++++|+|+|++||+|+.||+|+|||+.+
T Consensus 22 ~~~~~spdg~~l~~~~~~~v~l~~~~------~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~----- 90 (611)
T 1nr0_A 22 VVLGNTPAGDKIQYCNGTSVYTVPVG------SLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ----- 90 (611)
T ss_dssp CCCEECTTSSEEEEEETTEEEEEETT------CSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS-----
T ss_pred eEEeeCCCCCEEEeCCCCEEEEecCC------CcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCC-----
Confidence 34566676666555432222222211 1223456789999999999999999999999999999999853
Q ss_pred cCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCccccceeeeccccceEEEEE
Q psy15157 156 SMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231 (344)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 231 (344)
........+.+|.+.|.+++|+|+++.|++++.+ +.|++||. ++... ....|...|.+++|
T Consensus 91 -----------~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~--~l~gh~~~v~~v~f 155 (611)
T 1nr0_A 91 -----------TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNG--NLTGQARAMNSVDF 155 (611)
T ss_dssp -----------TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCB--CCCCCSSCEEEEEE
T ss_pred -----------CcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcc--eecCCCCCceEEEE
Confidence 1233456788999999999999999999998875 47888874 33332 33568889999999
Q ss_pred ecCCC-EEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecc-----
Q psy15157 232 HPCGD-YMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK----- 282 (344)
Q Consensus 232 ~~~~~-~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----- 282 (344)
+|++. .|++|+.|+.+++| +|+|++|++|+.|+.|++||..+++.+..+..
T Consensus 156 ~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~ 235 (611)
T 1nr0_A 156 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 235 (611)
T ss_dssp CSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccc
Confidence 99987 59999999999998 78999999999999999999999988877743
Q ss_pred -cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 283 -AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 283 -~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.|. ..|.+++|+|+|++|++++.|++|++||+++++++.++..
T Consensus 236 ~~h~-~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 236 VAHS-GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp CSSS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cccC-CCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecC
Confidence 454 4799999999999999999999999999999988877653
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=242.47 Aligned_cols=213 Identities=15% Similarity=0.290 Sum_probs=176.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|+||+.||+|+|||+.+ ......+..|...|.+++|+|+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~------------------~~~~~~~~~h~~~v~~~~~s~~ 119 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT------------------SQKTHAIKLHCPWVMECAFAPN 119 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT------------------TEEEEEEECCCTTCCCCEECTT
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC------------------CccceEEecCCCCEEEEEECCC
Confidence 4567899999999999999999999999999999999853 4566788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCc-----cccceeeeccccceEEEEEecC-CCEEEEEeCCCEEEEEc-------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSS-----VRKAHKTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLYS------------- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~~------------- 251 (344)
+++|++|+.|+.|++||+.+.. ........+|...+.++.|.|+ +..+++|+.|+.+++|+
T Consensus 120 g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~ 199 (380)
T 3iz6_a 120 GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE 199 (380)
T ss_dssp SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC
T ss_pred CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc
Confidence 9999999999999999997532 1112233467788999999997 45799999999999992
Q ss_pred ----------------CCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 252 ----------------SDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 252 ----------------~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+++.++++|+.|+.|++||++. ++.+..+. .|. ..|++++|+|++++|++|+.||+|++||
T Consensus 200 ~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~-~~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 200 FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHE-GDINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCS-SCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcC-CCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 2678999999999999999984 46666665 454 4699999999999999999999999999
Q ss_pred cCCCeeEEEeecCCCc-----CceeeeeeeccCC
Q psy15157 315 LSSARCLIAYTGAGSM-----GQQFELTLTVDAD 343 (344)
Q Consensus 315 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 343 (344)
+++++++..+..+... .....+.|++++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 311 (380)
T 3iz6_a 278 MRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR 311 (380)
T ss_dssp TTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS
T ss_pred CCCCcEEEEecccccccccccCceEEEEECCCCC
Confidence 9999999998765432 1244566666553
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-31 Score=228.51 Aligned_cols=200 Identities=20% Similarity=0.293 Sum_probs=172.6
Q ss_pred eeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
..+|.||.+.|++++|+|+ +++|+|||.|++|+|||+.+.. .....+...+.+|...|.+++|+|+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~-------------~~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDE-------------TNYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSS-------------SCSEEEEEEECCCSSCEEEEEECTT
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC-------------cccceeeEEEeCCCCCEEEEEECCC
Confidence 4568999999999999997 6899999999999999996421 1223456788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|++|+.|+.|++|+........ ....+...+..+.+++++.++++++.|+.+++|
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~ 175 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTR--RFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 175 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEE
T ss_pred CCEEEEEcccccceEEeecccceee--eecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCccc
Confidence 9999999999999999998875433 334456678889999999999999999999999
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+....++++++.|+.|++||+++++.+..+. .|. ..|++++|+|++++|++|+.||.|++||+++++++..+
T Consensus 176 ~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~-~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 176 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-CCC-CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 2344678899999999999999999988886 444 47999999999999999999999999999999999999
Q ss_pred ecCC
Q psy15157 325 TGAG 328 (344)
Q Consensus 325 ~~~~ 328 (344)
.++.
T Consensus 254 ~~~~ 257 (340)
T 4aow_A 254 DGGD 257 (340)
T ss_dssp ECSS
T ss_pred cCCc
Confidence 8764
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=235.64 Aligned_cols=210 Identities=22% Similarity=0.292 Sum_probs=163.8
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--CC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--SA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~ 191 (344)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++ ....+..+.+|.+.|.+++|++ ++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~----------------~~~~~~~l~gH~~~V~~v~~~~~~~~ 71 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG----------------GQILIADLRGHEGPVWQVAWAHPMYG 71 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT----------------EEEEEEEEECCSSCEEEEEECCGGGS
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC----------------CcEEEEEEcCCCccEEEEEeCCCCCC
Confidence 46799999999999999999999999999999998631 1234677899999999999986 47
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEEc------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~~------------------ 251 (344)
++|++|+.|++|++||++++..........|...|.+++|+|+ +.+|++|+.|+.+++|+
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 8999999999999999988754334444568889999999998 88999999999999983
Q ss_pred --------CC-----------------CCEEEEEeCCCcEEEEeCCCC---eEEeeecccCCCccEEEEEEccCC----C
Q psy15157 252 --------SD-----------------GRIYCSGSKDGDIKIWDGVSS---KCVATFSKAHDGAEISSLTFTRNG----K 299 (344)
Q Consensus 252 --------~~-----------------~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~i~~~~~~----~ 299 (344)
|+ +.+|++|+.|+.|++||++.. +.+..+. .|. ..|.+++|+|++ +
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~-~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHS-DWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCS-SCEEEEECCCCSSCSCC
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCC-CceEEEEecCCCCCCCc
Confidence 22 358999999999999999755 4555665 454 479999999986 8
Q ss_pred EEEEEeCCCcEEEEEcCCC---e-eEEEeecCCCcCceeeeeeeccCC
Q psy15157 300 YLLSSGKDSLVKLWELSSA---R-CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 300 ~l~s~~~dg~i~vwd~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+|++++.|++|++||+.+. + ....+.+|. .....+.|++++.
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~--~~v~~v~~sp~g~ 275 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN--DVVWHVSWSITAN 275 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBCCEEEECS--SCEEEEEECTTTC
T ss_pred eEEEEcCCCeEEEEEccCccccchhhhhhhcCC--CcEEEEEEcCCCC
Confidence 9999999999999999863 1 123344443 3455666666654
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=233.99 Aligned_cols=186 Identities=20% Similarity=0.279 Sum_probs=160.9
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP- 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 192 (344)
...+|.+.|++++|+|++++|++|+.|++|++||+.+ ...+..+.+|...|++++|++++.
T Consensus 134 ~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~------------------~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 134 AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ------------------KAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEECTTCSS
T ss_pred ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEEcCCCCCEEEEEEccCCCc
Confidence 4568999999999999999999999999999999853 566788899999999999999875
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC-CCEEEEEeCCCEEEEE---------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~--------------------- 250 (344)
++++++.||+|++||+++++.........+...+.+++|+|+ +.++++|+.++.|++|
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l 275 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL 275 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE
Confidence 889999999999999999876665555566778999999997 5678899999999998
Q ss_pred --cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 251 --SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 251 --~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
+|++ ++|++|+.|++|+|||+++++++..+ .|. ..|++++|+| ++++|++++.||+|++||+.+...
T Consensus 276 ~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--~H~-~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 276 AYSYHSSPFLASISEDCTVAVLDADFSEVFRDL--SHR-DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--CCS-SCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--CCC-CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 5666 67999999999999999999888765 454 4799999998 899999999999999999976533
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-30 Score=225.34 Aligned_cols=208 Identities=25% Similarity=0.411 Sum_probs=176.4
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|...|.+++|+|++++|++|+.|+.|++||+.+ ...+..+.+|...|.+++|+|++
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS------------------GKCLKTLKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCEEEEEECCSSCEEEEEECSSS
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC------------------CcEEEEEcCCCCCEEEEEEcCCC
Confidence 445789999999999999999999999999999999963 45677888999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
++|++|+.||.|++||+++++.... ...|...|.+++|+|++.++++++.|+.+++|
T Consensus 120 ~~l~s~~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 197 (312)
T 4ery_A 120 NLIVSGSFDESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 197 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEE
T ss_pred CEEEEEeCCCcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEE
Confidence 9999999999999999998765433 34577889999999999999999999999998
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCcc-EEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE-ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|+++++++++.|+.|++||+++++.+..+..+..... +......+++.+|++|+.||.|++||+.+++.+..+.+
T Consensus 198 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 277 (312)
T 4ery_A 198 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 277 (312)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhc
Confidence 68899999999999999999999999888864433222 23333346889999999999999999999999999999
Q ss_pred CCCcCceeeeeeecc
Q psy15157 327 AGSMGQQFELTLTVD 341 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~ 341 (344)
|.... ..+.+.++
T Consensus 278 h~~~v--~~~~~~p~ 290 (312)
T 4ery_A 278 HTDVV--ISTACHPT 290 (312)
T ss_dssp CSSCE--EEEEECSS
T ss_pred cCCcE--EEEeecCc
Confidence 87653 34444444
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-30 Score=227.60 Aligned_cols=216 Identities=19% Similarity=0.256 Sum_probs=181.2
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+..|...|.+++|+|+|.++++|+.|+.+++|++..... .........+.+|...|.+++|+|++
T Consensus 99 ~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~------------~~~~~~~~~~~~h~~~v~~~~~~~~~ 166 (354)
T 2pbi_B 99 EHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN------------ENMAAKKKSVAMHTNYLSACSFTNSD 166 (354)
T ss_dssp EEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT------------CCSGGGCEEEEECSSCEEEEEECSSS
T ss_pred ceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc------------ccccccceeeeccCCcEEEEEEeCCC
Confidence 345678999999999999999999999999999999863210 01123345667899999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE-------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~------------------- 250 (344)
..|++++.|++|++||+.+++....+ ..|...|.+++|+| +|.++++|+.|+.+++|
T Consensus 167 ~~l~t~s~D~~v~lwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~ 244 (354)
T 2pbi_B 167 MQILTASGDGTCALWDVESGQLLQSF--HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVN 244 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEE--cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeE
Confidence 99999999999999999988655433 46788899999987 57899999999999999
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|++.++++|+.|+.|++||+++++.+..+........+.+++|+|+|++|++|+.|+.|++||+.+++.+..+.+
T Consensus 245 ~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~ 324 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG 324 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC
Confidence 6889999999999999999999998777665333334689999999999999999999999999999999999998
Q ss_pred CCCcCceeeeeeeccCC
Q psy15157 327 AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (344)
|... ...+.+++++.
T Consensus 325 h~~~--v~~l~~spdg~ 339 (354)
T 2pbi_B 325 HENR--VSTLRVSPDGT 339 (354)
T ss_dssp CSSC--EEEEEECTTSS
T ss_pred CCCc--EEEEEECCCCC
Confidence 8654 45566667654
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-31 Score=227.81 Aligned_cols=199 Identities=22% Similarity=0.348 Sum_probs=157.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cC-CcCCeEEEEEcC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YD-HIEEVTCLEFHP 189 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~ 189 (344)
...+.+|.+.|++++|+++ +||+|+.|++|++||+... .......+ .+ |...|.+++|+|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~----------------~~~~~~~~~~~~h~~~v~~v~~sp 68 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYD----------------DFTLIDVLDETAHKKAIRSVAWRP 68 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSS----------------CCEEEEEECTTCCCSCEEEEEECT
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCC----------------CeEEEEEEecCCccCCEEEEEECC
Confidence 4567899999999999987 9999999999999999631 12334445 34 999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCc-----cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSS-----VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------- 250 (344)
++++|++|+.|++|++||+.... .........|...|.+++|+|+|++|++|+.|+.+++|
T Consensus 69 ~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~ 148 (330)
T 2hes_X 69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISV 148 (330)
T ss_dssp TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEE
Confidence 99999999999999999986431 11122334688899999999999999999999999998
Q ss_pred -------------cCCCCEEEEEeCCCcEEEEeCCCC--eEEeeecccCCCccEEEEEEccC--CCEEEEEeCCCcEEEE
Q psy15157 251 -------------SSDGRIYCSGSKDGDIKIWDGVSS--KCVATFSKAHDGAEISSLTFTRN--GKYLLSSGKDSLVKLW 313 (344)
Q Consensus 251 -------------~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~vw 313 (344)
+|++.+|++|+.|+.|++||..++ +++..+. .|. ..|.+++|+|+ +.+|++|+.|++|++|
T Consensus 149 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~-~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 149 LQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHE-GTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCS-SCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCC-CcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 567889999999999999998876 5666665 454 47999999998 7799999999999999
Q ss_pred EcCCC--------eeEEEeec-CCCc
Q psy15157 314 ELSSA--------RCLIAYTG-AGSM 330 (344)
Q Consensus 314 d~~~~--------~~~~~~~~-~~~~ 330 (344)
|++++ .++..+.+ |...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (330)
T 2hes_X 227 KYMGDDEDDQQEWVCEAILPDVHKRQ 252 (330)
T ss_dssp EEEEECTTSCEEEEEEEECCSCCSSC
T ss_pred EecCCCccccceeEEeeecccccccc
Confidence 99765 45555554 4433
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-31 Score=231.19 Aligned_cols=198 Identities=22% Similarity=0.346 Sum_probs=160.8
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|++++|++|+.|++|++||+.+. .....+..+.+|...|.+++|+|++
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~---------------~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE---------------DEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT---------------SCEEEEEEECCCCSCEEEEEECSSS
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC---------------CCeEEEEEecCcCCCeEEEEECCCC
Confidence 4567899999999999999999999999999999999632 1234567788999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------- 251 (344)
.+|++|+.|++|++||.+++..........|...|.+++|+|+|++|++|+.|+.|++|+
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 999999999999999998775444445567888999999999999999999999999994
Q ss_pred -------------------CCCCEEEEEeCCCcEEEEeCCCCe--------EEeeecccCCCccEEEEEEccCC-CEEEE
Q psy15157 252 -------------------SDGRIYCSGSKDGDIKIWDGVSSK--------CVATFSKAHDGAEISSLTFTRNG-KYLLS 303 (344)
Q Consensus 252 -------------------~~~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~i~~~~~~-~~l~s 303 (344)
+++..+++++.|+.|++|+...+. ........|. ..|++++|+|++ .+|++
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHS-QDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSS-SCEEEEEECSSSTTEEEE
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccccc-CcEeEeEEeCCCceEEEE
Confidence 346679999999999999987542 1112223454 469999999987 59999
Q ss_pred EeCCCcEEEEEcCCCeeEEEee
Q psy15157 304 SGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
|+.||.|++|++.+++.+..++
T Consensus 322 ~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 322 CSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp EETTSCEEEEEECC--------
T ss_pred cCCCCcEEEEEecCCCCccccc
Confidence 9999999999999988766554
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-30 Score=225.52 Aligned_cols=208 Identities=23% Similarity=0.354 Sum_probs=178.5
Q ss_pred ccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 109 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
......+.+|.+.|++++|+|++++|++|+.||.|++||+.+ ...+..+.+|...|.+++|+
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~------------------~~~~~~~~~h~~~v~~~~~~ 83 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN------------------GERLGTLDGHTGTIWSIDVD 83 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT------------------CCEEEEECCCSSCEEEEEEC
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC------------------chhhhhhhhcCCcEEEEEEc
Confidence 344566899999999999999999999999999999999853 45678889999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-----CEEEEE-------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-----FVLRLY------------- 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~~------------- 250 (344)
|++++|++++.||.|++||+.+++....+. +...+.+++|+|++.++++++.+ +.+.+|
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 84 CFTKYCVTGSADYSIKLWDVSNGQCVATWK---SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEee---cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 999999999999999999999886654443 67789999999999999999998 888887
Q ss_pred -----------------------cCCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 251 -----------------------SSDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 251 -----------------------~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+++++++++++.||.|++||+++ ++.+..+. .|. ..|.+++|+|++++|++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-LHE-KSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-CCS-SCEEEEEECTTSSEEEEEET
T ss_pred cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-cCC-CceeEEEECCCCCEEEEecC
Confidence 36788999999999999999998 67777776 343 46999999999999999999
Q ss_pred CCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 307 DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 307 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
||.|++||+++++.+..+.... ....+.+++++
T Consensus 239 d~~i~v~d~~~~~~~~~~~~~~---~~~~~~~~~~~ 271 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYETDC---PLNTAVITPLK 271 (369)
T ss_dssp TSEEEEEETTTCCEEEEEECSS---CEEEEEECSSS
T ss_pred CceEEEEECCCCceeeeecCCC---CceeEEecCCC
Confidence 9999999999999999988432 23344444443
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=241.82 Aligned_cols=198 Identities=17% Similarity=0.244 Sum_probs=163.6
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CC
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 191 (344)
...+|...|+||+|+| ++++||+|+.||+|+|||+.+ ........+.+|.+.|++|+|+| ++
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~----------------~~~~~~~~~~gH~~~V~~l~f~p~~~ 177 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGI----------------KDKPTFIKGIGAGGSITGLKFNPLNT 177 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSC----------------CSCCEEECCCSSSCCCCEEEECSSCT
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCC----------------CCceeEEEccCCCCCEEEEEEeCCCC
Confidence 4568999999999999 677999999999999999864 22344556789999999999998 67
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.+|+||+.||+|++||++++..........+...+.+++|+|++.+|++|+.++.|++|
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVA 257 (435)
T ss_dssp TEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEE
T ss_pred CEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeee
Confidence 89999999999999999875433222222334567889999999999999999999998
Q ss_pred -cCCCC-EEEEEeCCCcEEEEeCCCCeEEeeec--ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 -SSDGR-IYCSGSKDGDIKIWDGVSSKCVATFS--KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 -~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+|++. ++++|+.|+.|++||+++.+....+. ..|. ..|++++|+|+|++|++++.||.|++||++++++...+.+
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHR-HPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCS-SCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeecc-ccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEec
Confidence 45554 78899999999999999876554432 2344 4799999999999999999999999999999998888776
Q ss_pred CC
Q psy15157 327 AG 328 (344)
Q Consensus 327 ~~ 328 (344)
|.
T Consensus 337 ~~ 338 (435)
T 4e54_B 337 HP 338 (435)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-30 Score=222.96 Aligned_cols=208 Identities=20% Similarity=0.342 Sum_probs=177.3
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
+...+.+|...|++++|+|++++|++|+.|++|++||+.+ ...+..+.+|...|.+++|+|+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~------------------~~~~~~~~~h~~~v~~~~~~~~ 118 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT------------------GETYQRFVGHKSDVMSVDIDKK 118 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------TEEEEEEECCSSCEEEEEECTT
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC------------------CCeeEEEccCCCcEEEEEEcCC
Confidence 4556889999999999999999999999999999999964 4567788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC------CCEEEEEeCCCEEEEE--------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC------GDYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~~~~i~~~-------------- 250 (344)
+.+|++|+.|++|++||++... ......|...+.+++|+|. +..+++++.|+.+++|
T Consensus 119 ~~~l~s~s~D~~i~vwd~~~~~---~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h 195 (319)
T 3frx_A 119 ASMIISGSRDKTIKVWTIKGQC---LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH 195 (319)
T ss_dssp SCEEEEEETTSCEEEEETTSCE---EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CCEEEEEeCCCeEEEEECCCCe---EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC
Confidence 9999999999999999997532 2344567888999999985 4589999999999998
Q ss_pred ---------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 251 ---------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ---------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
+|+|++|++|+.||.|++||+.+++.+..+.. + ..|.+++|+|++.+|++++.+ .+++|++..+..+
T Consensus 196 ~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~--~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~ 271 (319)
T 3frx_A 196 NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-Q--DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLV 271 (319)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-C--SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-C--CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeee
Confidence 68999999999999999999999999888863 3 369999999999999988755 5999999998888
Q ss_pred EEeecCC------CcCceeeeeeeccCC
Q psy15157 322 IAYTGAG------SMGQQFELTLTVDAD 343 (344)
Q Consensus 322 ~~~~~~~------~~~~~~~~~~~~~~~ 343 (344)
..+..+. ......++.|++|++
T Consensus 272 ~~~~~~~~~~~~~~~~~v~~~~~spdg~ 299 (319)
T 3frx_A 272 DDLRPEFAGYSKAAEPHAVSLAWSADGQ 299 (319)
T ss_dssp EEECCCCTTCCGGGCCCEEEEEECTTSS
T ss_pred eccCccccccccCcCcceeEEEECCCCC
Confidence 8776542 123456777888764
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-31 Score=230.96 Aligned_cols=213 Identities=20% Similarity=0.295 Sum_probs=176.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-- 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-- 190 (344)
..+.+|.+.|++++|+|++++|++|+.||.|+|||+.. ........+.+|.+.|++++|+++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~----------------~~~~~~~~~~~h~~~v~~~~~~~~~~ 68 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG----------------ETHKLIDTLTGHEGPVWRVDWAHPKF 68 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEET----------------TEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCC----------------CcceeeeEecCCCCcEEEEEeCCCCC
Confidence 35789999999999999999999999999999999952 234567788999999999999987
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~------------------ 250 (344)
+.+|++|+.||.|++||+.+++.........+...|.+++|+|+ +.++++++.++.+++|
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 89999999999999999998764344444567889999999999 9999999999999998
Q ss_pred -------cC-------------CCCEEEEEeCCCcEEEEeCCCCe----EEeeecccCCCccEEEEEEccC---CCEEEE
Q psy15157 251 -------SS-------------DGRIYCSGSKDGDIKIWDGVSSK----CVATFSKAHDGAEISSLTFTRN---GKYLLS 303 (344)
Q Consensus 251 -------~~-------------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~i~~~~~---~~~l~s 303 (344)
+| ++.++++|+.||.|++||++++. ....+. .|. ..|.+++|+|+ +++|++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~-~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHS-DWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCS-SCEEEEEECCCCSSSEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-ccc-CcEeEEEECCCCCCCCeEEE
Confidence 45 68999999999999999998764 333443 344 47999999999 899999
Q ss_pred EeCCCcEEEEEcCCCe---eEEEeecCCCcCceeeeeeeccCC
Q psy15157 304 SGKDSLVKLWELSSAR---CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
++.||.|++||++++. ....+...........+.+++++.
T Consensus 227 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 269 (379)
T 3jrp_A 227 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 269 (379)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred EeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC
Confidence 9999999999999874 333344433445566777777664
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-30 Score=248.64 Aligned_cols=210 Identities=20% Similarity=0.297 Sum_probs=178.0
Q ss_pred eEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 113 AYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
..+.+|.+.|++++|+++ +++|+||+.|++|++|++.+.. .........+.+|...|.+++|+|++
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~-------------~~~~~~~~~~~~h~~~v~~v~~s~~g 442 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDD-------------KAYGVAQRRLTGHSHFVEDVVLSSDG 442 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCST-------------TCSCEEEEEEECCSSCEEEEEECTTS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCC-------------cccccccceecCCCCcEEEEEECCCC
Confidence 457899999999999986 4799999999999999986421 11134467789999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------- 251 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------- 251 (344)
++|++|+.||+|++||+.++.... ....|...|.+++|+|++++|++|+.|+.|++|+
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAGVSTR--RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred CEEEEEeCCCcEEEEECCCCccee--EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 999999999999999999876543 3456888999999999999999999999999993
Q ss_pred ------CCC--CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 252 ------SDG--RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 252 ------~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
|++ ..+++|+.|+.|++||++++++...+. .|. ..|++++|+|++++|++|+.||.|++||+++++++..
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~-~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHT-GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCC-CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 333 579999999999999999999888886 444 4799999999999999999999999999999999988
Q ss_pred eecCCCcCceeeeeeeccC
Q psy15157 324 YTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~ 342 (344)
+..+. ....+.+++++
T Consensus 599 ~~~~~---~v~~~~~sp~~ 614 (694)
T 3dm0_A 599 LEANS---VIHALCFSPNR 614 (694)
T ss_dssp CBCSS---CEEEEEECSSS
T ss_pred ecCCC---cEEEEEEcCCC
Confidence 87653 34455666554
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-30 Score=231.25 Aligned_cols=195 Identities=28% Similarity=0.477 Sum_probs=165.5
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
+...|++++|+|+|++|++|+.|+.|+|||+.+ .+....+.+|...|.+++|+|++..|++|
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~------------------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 183 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN------------------RKIVMILQGHEQDIYSLDYFPSGDKLVSG 183 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCC------------------CcEEEEEccCCCCEEEEEEcCCCCEEEEe
Confidence 334599999999999999999999999999853 45677889999999999999999999999
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE--------------------------
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY-------------------------- 250 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~-------------------------- 250 (344)
+.|++|++||+++++....+ .+...+.+++|+| ++.++++|+.|+.+++|
T Consensus 184 s~d~~v~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 184 SGDRTVRIWDLRTGQCSLTL---SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp ETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEE
T ss_pred cCCCcEEEEECCCCeeEEEE---EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEE
Confidence 99999999999987654332 3556799999999 89999999999999998
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCe------------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSK------------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~------------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+++|+++++|+.|+.|++||+++.. +...+. .|. ..|.+++|+|++++|++|+.|+.|++||
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~v~~~~~~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHK-DFVLSVATTQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEE-CCS-SCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEe-ccc-CcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4678999999999999999987642 333444 344 4699999999999999999999999999
Q ss_pred cCCCeeEEEeecCCCcCceee
Q psy15157 315 LSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~ 335 (344)
+++++++..+.+|......+.
T Consensus 339 ~~~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 339 KKSGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp TTTCCEEEEEECCSSCEEEEE
T ss_pred CCCCeEEEEECCCCCCEEEEE
Confidence 999999999999976654444
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-30 Score=225.05 Aligned_cols=190 Identities=21% Similarity=0.353 Sum_probs=150.2
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
+|.+.|++++|+|++++|++|+.|++|+|||+..... ..........+.+|...|.+++|+|++++|++
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~-----------~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las 124 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESAD-----------RTFEMDLLAIIEGHENEVKGVAWSNDGYYLAT 124 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------------------CCCEEEEEEC----CEEEEEECTTSCEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcC-----------ccccceeEEEEcCCCCcEEEEEECCCCCEEEE
Confidence 3999999999999999999999999999999853110 01123567788999999999999999999999
Q ss_pred EeCCCcEEEEEcCCC-ccc-cceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------
Q psy15157 197 GSKDKTVKMFDYSKS-SVR-KAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------ 250 (344)
|+.|++|++||++.. ... .......|...|.+++|+|++.+|++|+.|+.+++|
T Consensus 125 ~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~ 204 (330)
T 2hes_X 125 CSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD 204 (330)
T ss_dssp EETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred EeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEE
Confidence 999999999999543 211 122334678899999999999999999999999998
Q ss_pred -cCC--CCEEEEEeCCCcEEEEeCCCC--------eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 251 -SSD--GRIYCSGSKDGDIKIWDGVSS--------KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 -~~~--~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+|+ +.++++|+.|+.|++||++.+ .+...+...|. ..|.+++|++++ +|++++.||.|++||..+++
T Consensus 205 ~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 205 FDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHK-RQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp ECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCS-SCEEEEEECTTS-CEEEEETTSCEEEEEEETTE
T ss_pred ecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccc-cceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc
Confidence 344 668999999999999998764 34444443354 579999999765 79999999999999998874
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-30 Score=224.95 Aligned_cols=211 Identities=19% Similarity=0.311 Sum_probs=168.9
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|...|++++|+|++.++++|+.|++|++||+.+ ...+..+.+|...|.+++|+|+
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~------------------~~~~~~~~~h~~~v~~v~~sp~ 129 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT------------------GTTYKRFVGHQSEVYSVAFSPD 129 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS------------------SCEEEEEECCCSCEEEEEECSS
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC------------------CcEEEEEcCCCCcEEEEEECCC
Confidence 3456789999999999999999999999999999999964 4567788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCC----------CEEEEEeCCCEEEEE----------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG----------DYMVVGTDHFVLRLY---------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~~~~i~~~---------- 250 (344)
+++|++|+.|++|++||+.............|...+.+++|+|++ .++++++.|+.+++|
T Consensus 130 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 209 (343)
T 2xzm_R 130 NRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTF 209 (343)
T ss_dssp TTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEE
T ss_pred CCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEE
Confidence 999999999999999999743222212122567789999999987 799999999999998
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+|+|++|++|+.||.|++||+.. ......+. . +..|.+++|+|++++++++ .|+.|++||+.+
T Consensus 210 ~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~--~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~ 285 (343)
T 2xzm_R 210 KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-A--GSTINQIAFNPKLQWVAVG-TDQGVKIFNLMT 285 (343)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-C--SSCEEEEEECSSSCEEEEE-ESSCEEEEESSS
T ss_pred cCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-C--CCcEEEEEECCCCCEEEEE-CCCCEEEEEeCC
Confidence 68999999999999999999954 33333332 2 2359999999999887655 588899999998
Q ss_pred CeeEE--EeecC---------CCcCceeeeeeeccCC
Q psy15157 318 ARCLI--AYTGA---------GSMGQQFELTLTVDAD 343 (344)
Q Consensus 318 ~~~~~--~~~~~---------~~~~~~~~~~~~~~~~ 343 (344)
++... .+..+ +......++.++++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 322 (343)
T 2xzm_R 286 QSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK 322 (343)
T ss_dssp CCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC
T ss_pred CCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC
Confidence 77654 44321 2334456777777764
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-30 Score=243.53 Aligned_cols=204 Identities=29% Similarity=0.492 Sum_probs=174.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
+...|.||++.|+|++|||||++||+|+.|++|+|||.. .+.+.++.+|.+.|++++|+|+
T Consensus 8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-------------------~~~~~~l~gh~~~V~~l~fspd 68 (577)
T 2ymu_A 8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-------------------GQLLQTLTGHSSSVWGVAFSPD 68 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-------------------SCEEEEEECCSSCEEEEEECTT
T ss_pred EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-------------------CCEEEEEeCCCCCEEEEEECCC
Confidence 455689999999999999999999999999999999963 3567889999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|++++.|++|++||+. ++.. .....|...|.+++|+|+++++++++.++.+++|
T Consensus 69 g~~las~~~d~~i~vWd~~-~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 145 (577)
T 2ymu_A 69 GQTIASASDDKTVKLWNRN-GQLL--QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV 145 (577)
T ss_dssp SSEEEEEETTSCEEEEETT-SCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEECC-CCEE--EEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeee
Confidence 9999999999999999964 4333 3345678899999999999999999999999887
Q ss_pred -------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCc
Q psy15157 251 -------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287 (344)
Q Consensus 251 -------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 287 (344)
++++.++++++.|+.|++||. +++.+..+. .|. .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~-~~~-~ 222 (577)
T 2ymu_A 146 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHS-S 222 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE-CCS-S
T ss_pred eeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe-cCC-C
Confidence 578899999999999999995 566676775 344 4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.|.+++|+|++++|++++.|+.|++||. +++.+..+.+|..... .+.+++++
T Consensus 223 ~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~--~v~~~~d~ 274 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVN--GVAFRPDG 274 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEE--EEEECTTS
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEE--EEEEcCCC
Confidence 6999999999999999999999999996 6788888888865543 34444443
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.98 E-value=3.3e-30 Score=227.21 Aligned_cols=207 Identities=14% Similarity=0.197 Sum_probs=178.3
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+..|.++|++++|+|++++|++|+.|+.|++||+.+. .......+.+|...|.+++|+|++++|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~----------------~~~~~~~~~~h~~~v~~~~~~~~~~~l 67 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN----------------KWVQVHELKEHNGQVTGVDWAPDSNRI 67 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT----------------EEEEEEEEECCSSCEEEEEEETTTTEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC----------------cEEeeeeecCCCCcccEEEEeCCCCEE
Confidence 4569999999999999999999999999999998631 112677888999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------ 250 (344)
++++.||.|++||+.+++.........+...|.+++|+|+++++++++.++.+++|
T Consensus 68 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 68 VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred EEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 99999999999999887655555556678899999999999999999999999987
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeC------------------CCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCc
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDG------------------VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~------------------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~ 309 (344)
+|++.++++++.||.|++||+ ..++.+..+. .|. ..|.+++|+|++++|++++.||.
T Consensus 148 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 148 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSC-GWVHGVCFSANGSRVAWVSHDST 225 (372)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCS-SCEEEEEECSSSSEEEEEETTTE
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCC-CeEEEEEECCCCCEEEEEeCCCE
Confidence 678999999999999999995 3667777776 343 47999999999999999999999
Q ss_pred EEEEEcCCCeeEEEeecCCCcCceeeeeeecc
Q psy15157 310 VKLWELSSARCLIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 310 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (344)
|++||+++++++..+.+|...... +.++++
T Consensus 226 i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~ 255 (372)
T 1k8k_C 226 VCLADADKKMAVATLASETLPLLA--VTFITE 255 (372)
T ss_dssp EEEEEGGGTTEEEEEECSSCCEEE--EEEEET
T ss_pred EEEEECCCCceeEEEccCCCCeEE--EEEecC
Confidence 999999999999999988655443 444444
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=8.6e-30 Score=226.93 Aligned_cols=220 Identities=24% Similarity=0.430 Sum_probs=163.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+|.+.|+|++|+|+|++||+|+ +++++||++.++..........................+...|.+++|+|++++|+
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 47999999999999999999986 78999999976433221111000000000000011112344599999999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cC-
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SS- 252 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~- 252 (344)
+|+.||.|++||+.+++... ....|...|.+++|+|++.+|++++.|+.+++| +|
T Consensus 140 s~~~d~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVM--ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEcCCCeEEEEECCCCcEEE--EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 99999999999999876543 334688899999999999999999999999999 35
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeec------ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC--------
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFS------KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA-------- 318 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~-------- 318 (344)
+++++++|+.|+.|++||+++++.+..+. ..|. ..|.+++|+|+|++|++|+.|+.|++||+++.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK-DSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCS-SCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCC-CCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 88999999999999999999998876663 2343 47999999999999999999999999999763
Q ss_pred ----eeEEEeecCCCcCceeeeeeecc
Q psy15157 319 ----RCLIAYTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 319 ----~~~~~~~~~~~~~~~~~~~~~~~ 341 (344)
.+...+.+|.... ..+.++++
T Consensus 297 ~~~~~~~~~~~~h~~~v--~~~~~~~~ 321 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFV--LSVATTQN 321 (393)
T ss_dssp ----CEEEEEECCSSCE--EEEEECGG
T ss_pred CCCCcceEEEecccCcE--EEEEECCC
Confidence 4566777776543 33444443
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-30 Score=229.16 Aligned_cols=181 Identities=15% Similarity=0.190 Sum_probs=149.6
Q ss_pred cCCCceEEEEECCCCCEEEE--EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCAT--GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~s--g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
.+...+++++|||||+++++ ++.|++|+|||+.+ ...+..+ .|.+.|.+++|+|+++++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~------------------~~~~~~~-~~~~~V~~v~fspdg~~l 191 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD------------------LTEKFEI-ETRGEVKDLHFSTDGKVV 191 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT------------------TEEEEEE-ECSSCCCEEEECTTSSEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC------------------CcEEEEe-CCCCceEEEEEccCCceE
Confidence 45567999999999998765 45799999999964 3344455 377889999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC----EEEEE--------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF----VLRLY-------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~~-------------------- 250 (344)
++++. +.+++|+..+++.........+...+.+++|+|++.++++++.++ .++.|
T Consensus 192 ~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 270 (365)
T 4h5i_A 192 AYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK 270 (365)
T ss_dssp EEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS
T ss_pred Eeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC
Confidence 99885 556777777765544344455778899999999999999998776 34444
Q ss_pred -------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 -------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 -------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+|+|++|++|+.|+.|+|||+++++++..+..+|. ..|++++|+|||++|++||.|++|+|||+...
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~-~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS-FAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS-SCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc-CCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89999999999999999999999999988765676 47999999999999999999999999999643
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.98 E-value=8e-31 Score=230.53 Aligned_cols=210 Identities=15% Similarity=0.178 Sum_probs=162.4
Q ss_pred ecCCCceEEEEECCCCCEEEEEeC------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSV------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..|...|++++|||||++||+|+. |++|++|+..++.. .........+|...|.+++|+|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~--------------~~~~~~~~~~~~~~V~~~~~s~ 104 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP--------------NESLCTAGVQTEAGVTDVAWVS 104 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC-----------------CGGGCSEEEECSSCEEEEEEET
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCc--------------ceeEecccCCCCCCEEEEEEcC
Confidence 579999999999999999999997 77899998754321 1122234456888999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccc--eeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKA--HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------- 250 (344)
++. +++++.||+|++||+.+++.... .....|...|++++|+|++++|++|+.|+.|++|
T Consensus 105 d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~ 183 (357)
T 4g56_B 105 EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE 183 (357)
T ss_dssp TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC
Confidence 975 55678899999999988764433 2334678899999999999999999999999999
Q ss_pred ------cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 251 ------SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN-GKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 251 ------~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
++++ .++++++.|+.|++||+++++....+........+.+++|+|+ +.+|++|+.|+.|++||+++++++.
T Consensus 184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~ 263 (357)
T 4g56_B 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ 263 (357)
T ss_dssp EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE
T ss_pred EEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE
Confidence 4555 4788999999999999999988776654444457999999997 5688999999999999999999999
Q ss_pred EeecCCCcCceeeeeeeccC
Q psy15157 323 AYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~ 342 (344)
.+.+|...... +.|++++
T Consensus 264 ~~~~~~~~v~~--l~~sp~~ 281 (357)
T 4g56_B 264 TSAVHSQNITG--LAYSYHS 281 (357)
T ss_dssp EECCCSSCEEE--EEECSSS
T ss_pred EEeccceeEEE--EEEcCCC
Confidence 99988765444 4455443
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.9e-30 Score=227.50 Aligned_cols=197 Identities=15% Similarity=0.175 Sum_probs=165.0
Q ss_pred eEEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-C
Q psy15157 113 AYVTSHKSPCRAGAFSIDG-QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-S 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~ 190 (344)
..+.+|.+.|++++|+|++ ++|++|+.||.|+|||+.+. .........+|...|.+++|+| +
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----------------~~~~~~~~~~h~~~v~~~~~~~~~ 130 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ----------------NKTSFIQGMGPGDAITGMKFNQFN 130 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST----------------TCEEEECCCSTTCBEEEEEEETTE
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc----------------ccceeeecCCcCCceeEEEeCCCC
Confidence 3568999999999999999 99999999999999999642 1122233347999999999999 6
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+.+|++++.|+.|++||+.+...........+...|.+++|+|++.++++|+.++.+++|
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEE
Confidence 789999999999999999864332222222344779999999999999999999999998
Q ss_pred --cCCCC-EEEEEeCCCcEEEEeCCC----CeEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 251 --SSDGR-IYCSGSKDGDIKIWDGVS----SKCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 251 --~~~~~-~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
+|++. ++++|+.|+.|++||+++ +.++..+ .|. ..|.+++|+| ++++|++++.|+.|++||+++++.+.
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM--PHE-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE--ECS-SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe--cCC-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 67788 999999999999999998 5666665 343 4799999999 99999999999999999999999888
Q ss_pred EeecCC
Q psy15157 323 AYTGAG 328 (344)
Q Consensus 323 ~~~~~~ 328 (344)
.+.+|.
T Consensus 288 ~~~~~~ 293 (383)
T 3ei3_B 288 QIIIHP 293 (383)
T ss_dssp EEEECC
T ss_pred cccccc
Confidence 887664
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.2e-30 Score=225.24 Aligned_cols=211 Identities=18% Similarity=0.231 Sum_probs=174.6
Q ss_pred ceeEEecCCCceEEEEECCC---CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 111 ETAYVTSHKSPCRAGAFSID---GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~---~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
....+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ ........+.+|.+.|.+++|
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~----------------~~~~~~~~~~~h~~~v~~~~~ 94 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD----------------SGQTIPKAQQMHTGPVLDVCW 94 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT----------------TSCEEEEEEEECSSCEEEEEE
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC----------------CCceeEEEeccccCCEEEEEE
Confidence 44567899999999999998 69999999999999999963 123344778899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEE--ecCCCEEEEEeCCCEEEEEcCC------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF--HPCGDYMVVGTDHFVLRLYSSD------------ 253 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~~~i~~~~~~------------ 253 (344)
+|++++|++++.||.|++||+.+++.. ....|...|.+++| +|++.++++++.|+.+++|+..
T Consensus 95 ~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 95 SDDGSKVFTASCDKTAKMWDLSSNQAI---QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEE---EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred CcCCCEEEEEcCCCcEEEEEcCCCCce---eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999987643 34568889999999 8999999999999999999421
Q ss_pred --------------------------------------------------------CCEEEEEeCCCcEEEEeCCCC---
Q psy15157 254 --------------------------------------------------------GRIYCSGSKDGDIKIWDGVSS--- 274 (344)
Q Consensus 254 --------------------------------------------------------~~~l~~~~~dg~i~iwd~~~~--- 274 (344)
...+++++.||.|++||++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~ 251 (368)
T 3mmy_A 172 RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA 251 (368)
T ss_dssp CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH
T ss_pred CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc
Confidence 112889999999999999887
Q ss_pred eEEeeecccCCC-----------ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 275 KCVATFSKAHDG-----------AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 275 ~~~~~~~~~~~~-----------~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..+..+.. |.. ..|++++|+|++++|++++.||.|++||+.+++++..+.+|... ...+.+++++.
T Consensus 252 ~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--v~~~~~s~~g~ 328 (368)
T 3mmy_A 252 KDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQP--ISACCFNHNGN 328 (368)
T ss_dssp HHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSC--EEEEEECTTSS
T ss_pred ccceeeee-eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCC--ceEEEECCCCC
Confidence 34444442 221 15999999999999999999999999999999999999987654 45556666654
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=236.75 Aligned_cols=207 Identities=17% Similarity=0.257 Sum_probs=168.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+..|.++|++++|+|++++|++|+.|+.|+|||+.+. .......+.+|...|.+++|+|++++|
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~----------------~~~~~~~~~~h~~~v~~~~~s~~~~~l 70 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN----------------GWKHARTFSDHDKIVTCVDWAPKSNRI 70 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT----------------EEEECCCBCCCSSCEEEEEECTTTCCE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC----------------ceEEEEEEecCCceEEEEEEeCCCCEE
Confidence 4557889999999999999999999999999999632 014456778899999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCc-cccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSS-VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------- 250 (344)
++|+.||+|++||+.++. .........|...|.+++|+|++++|++++.|+.+++|
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEE
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeE
Confidence 999999999999999876 33334445688899999999999999999999999987
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCC------------------CCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGV------------------SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
+|+++++++++.|+.|++||+. .++++..+ .|. ..|.+++|+|++++|++++.||
T Consensus 151 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~v~~~~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 151 SLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSG-GWVHAVGFSPSGNALAYAGHDS 227 (377)
T ss_dssp EEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCS-SSEEEEEECTTSSCEEEEETTT
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCC-ceEEEEEECCCCCEEEEEeCCC
Confidence 6788999999999999999985 34555555 444 4799999999999999999999
Q ss_pred cEEEEEcCCCee----EEEeecCCCcCceeeeeeeccC
Q psy15157 309 LVKLWELSSARC----LIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 309 ~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.|++||++++++ +..+.+|..... .+.+++++
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~--~~~~s~~~ 263 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLR--SLLWANES 263 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEE--EEEEEETT
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceE--EEEEcCCC
Confidence 999999999987 788888876544 44445543
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-29 Score=219.06 Aligned_cols=190 Identities=19% Similarity=0.296 Sum_probs=160.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC--C
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP--S 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~ 190 (344)
..+.+|.+.|++++|+|++++|++|+.||.|++||+.+.. ........+.+|...|.+++|+| +
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~d 70 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT--------------SNWELSDSWRAHDSSIVAIDWASPEY 70 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS--------------CCEEEEEEEECCSSCEEEEEECCGGG
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC--------------CcceecceeccCCCcEEEEEEcCCCC
Confidence 3578999999999999999999999999999999996421 11245677889999999999999 5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcc-------ccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEEcC---------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSV-------RKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLYSS--------- 252 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~~~--------- 252 (344)
+.+|++|+.||.|++||++++.. ........+...|.+++|+|+ +.++++++.|+.+++|+.
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 89999999999999999988642 112334457889999999999 999999999999999942
Q ss_pred ------------------------------CCCEEEEEeCCCcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCC--
Q psy15157 253 ------------------------------DGRIYCSGSKDGDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNG-- 298 (344)
Q Consensus 253 ------------------------------~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~-- 298 (344)
++.++++++.|+.+.+|+...++. +..+. .|. ..|++++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~i~~~~~~p~~~~ 228 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-GHK-SLIRSISWAPSIGR 228 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-CCC-SCEEEEEECCCSSC
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-CCC-cceeEEEECCCCCC
Confidence 388999999999999888887765 44444 344 479999999998
Q ss_pred --CEEEEEeCCCcEEEEEcCCC
Q psy15157 299 --KYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 299 --~~l~s~~~dg~i~vwd~~~~ 318 (344)
++|++|+.||.|++||++++
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEEEC
T ss_pred cceEEEEEcCCCeEEEEeCCCC
Confidence 89999999999999999875
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-30 Score=239.89 Aligned_cols=196 Identities=16% Similarity=0.256 Sum_probs=169.5
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+.+|...|++++|+|++. .|++|+.|++|++||..+ .+...++.+|...|.+++|+|+++
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~------------------~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP------------------FKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT------------------BEEEEEECCCSSCEEEEEECTTSS
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC------------------CeEeeeeccccCceEEEEECCCCC
Confidence 4679999999999999987 699999999999999753 456778899999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceee-----eccccceEEEEEecCCCEEEEEeCCCEEEEEcC---------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKT-----IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--------------- 252 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~--------------- 252 (344)
+|++|+.|++|++||+.+++....+.. ..|...|.+++|+|+|++|++++.|+.+++|+.
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 999999999999999988765443321 158889999999999999999999999999954
Q ss_pred ---------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 253 ---------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 253 ---------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
++..+++++.|+.|++||...++....+. +|. ..|++++|+|+|++|++++.|+.|++||+.++++...
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~-gh~-~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY-GHN-KAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc-CCC-CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 34568899999999999999988777665 454 4799999999999999999999999999999988776
Q ss_pred e-ecCCC
Q psy15157 324 Y-TGAGS 329 (344)
Q Consensus 324 ~-~~~~~ 329 (344)
+ .+|..
T Consensus 362 ~~~~h~~ 368 (611)
T 1nr0_A 362 FPDVHAT 368 (611)
T ss_dssp SSCSCSS
T ss_pred cccCCcc
Confidence 6 34443
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=229.84 Aligned_cols=248 Identities=19% Similarity=0.311 Sum_probs=190.9
Q ss_pred CCCCccchhcccCCCceeeec-CCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccc
Q psy15157 77 SIGLNPIQEILIGPGLDLEFE-SDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKS 155 (344)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~ 155 (344)
++.+.|....+++++.+-... .+.. .......+.+|...|.+++|+|+|++|++|+.|+.|++|++.+....
T Consensus 71 ~~~~sp~~~~l~s~s~D~~v~iWd~~------~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~- 143 (380)
T 3iz6_a 71 SLDWTPEKNWIVSASQDGRLIVWNAL------TSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR- 143 (380)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEETT------TTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC-
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECC------CCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc-
Confidence 445566666666655432211 1111 12235567899999999999999999999999999999998642110
Q ss_pred cCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCccccceee---eccccceEEEEE
Q psy15157 156 SMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PILASGSKDKTVKMFDYSKSSVRKAHKT---IQESTFVRCLSF 231 (344)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~ 231 (344)
.........+.+|.+.|.++.|+|++ ..|++|+.|++|++||+.+++....+.. ..|...|.+++|
T Consensus 144 ----------~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 144 ----------DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp ----------CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred ----------cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 11223345678999999999999975 4799999999999999999875543321 357788999999
Q ss_pred ec-CCCEEEEEeCCCEEEEE------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC-
Q psy15157 232 HP-CGDYMVVGTDHFVLRLY------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD- 285 (344)
Q Consensus 232 ~~-~~~~l~~~~~~~~i~~~------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~- 285 (344)
++ ++.++++|+.|+.+++| +|++.+|++|+.||.|++||+++++.+..+.....
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 293 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR 293 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc
Confidence 87 88999999999999999 68899999999999999999999998877653221
Q ss_pred ----CccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe----ecCCCcCceeeeeeeccCC
Q psy15157 286 ----GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY----TGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 286 ----~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 343 (344)
...|++++|+|+|++|++|+.||.|++||+.+++.+..+ .+|.. ...++.+++++.
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~--~v~~l~~s~dg~ 357 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG--RISCLGLSSDGS 357 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC--CCCEEEECSSSS
T ss_pred cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC--ceEEEEECCCCC
Confidence 124899999999999999999999999999999998887 34443 445556666653
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=216.64 Aligned_cols=189 Identities=19% Similarity=0.277 Sum_probs=155.6
Q ss_pred eeEEecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 112 TAYVTSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
...+.+|.+.|++++|++ ++++|++|+.|++|+|||+.++ ....+..+.+|...|.+++|+|
T Consensus 46 ~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~----------------~~~~~~~~~~h~~~v~~v~~~p 109 (297)
T 2pm7_B 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG----------------RWSQIAVHAVHSASVNSVQWAP 109 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS----------------CBCCCEEECCCSSCEEEEEECC
T ss_pred EEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC----------------ceEEEEEeecCCCceeEEEeCc
Confidence 456789999999999986 4899999999999999999642 1223456788999999999999
Q ss_pred C--CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC-------------CCEEEEEeCCCEEEEE----
Q psy15157 190 S--APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC-------------GDYMVVGTDHFVLRLY---- 250 (344)
Q Consensus 190 ~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~~~~i~~~---- 250 (344)
+ +.+|++|+.||+|++||++++..........|...|.+++|+|+ +++|++|+.|+.|++|
T Consensus 110 ~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 110 HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (297)
T ss_dssp GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEET
T ss_pred CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC
Confidence 7 78999999999999999987643333444568889999999997 5799999999999998
Q ss_pred -----------------------cCC---CCEEEEEeCCCcEEEEeCCCCe---EEeeec-ccCCCccEEEEEEccCCCE
Q psy15157 251 -----------------------SSD---GRIYCSGSKDGDIKIWDGVSSK---CVATFS-KAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 251 -----------------------~~~---~~~l~~~~~dg~i~iwd~~~~~---~~~~~~-~~~~~~~v~~i~~~~~~~~ 300 (344)
+|+ +.+|++++.|++|++||+++.. ....+. ..+. ..|.+++|+|+|++
T Consensus 190 ~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~ 268 (297)
T 2pm7_B 190 DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP-DVLWRASWSLSGNV 268 (297)
T ss_dssp TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS-SCEEEEEECSSSCC
T ss_pred CCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCC-CcEEEEEECCCCCE
Confidence 455 4789999999999999987642 112221 2333 57999999999999
Q ss_pred EEEEeCCCcEEEEEcCC
Q psy15157 301 LLSSGKDSLVKLWELSS 317 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~ 317 (344)
|++++.|+.|++|+...
T Consensus 269 las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 269 LALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEETTSCEEEEEECT
T ss_pred EEEEcCCCcEEEEEECC
Confidence 99999999999999863
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=229.67 Aligned_cols=218 Identities=16% Similarity=0.216 Sum_probs=175.9
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA- 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 191 (344)
.+.+|.+.|++++|+| ++++|++|+.||+|+|||+.+..... .....+..+.+|...|.+++|+|++
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~-----------~~~~~~~~~~~h~~~v~~~~~~p~~~ 144 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL-----------PLREPVITLEGHTKRVGIVAWHPTAQ 144 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS-----------CBCSCSEEEECCSSCEEEEEECSSBT
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc-----------ccCCceEEecCCCCeEEEEEECcCCC
Confidence 4679999999999999 99999999999999999997531110 1114466788999999999999998
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.+|++|+.||.|++||+++++....+....|...|.+++|+|++.+|++++.|+.+++|
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPV 224 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCC
T ss_pred CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcce
Confidence 69999999999999999988654433214578899999999999999999999999998
Q ss_pred ----cCCCCEEEEE---eCCCcEEEEeCCCCeE-EeeecccCCCccEEEEEEccCCCEEEE-EeCCCcEEEEEcCCCee-
Q psy15157 251 ----SSDGRIYCSG---SKDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTFTRNGKYLLS-SGKDSLVKLWELSSARC- 320 (344)
Q Consensus 251 ----~~~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s-~~~dg~i~vwd~~~~~~- 320 (344)
++++.++++| +.|+.|++||+++++. +......+. ..+.+++|+|++++|++ |+.||.|++||+.+++.
T Consensus 225 ~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~ 303 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS-SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF 303 (402)
T ss_dssp EEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC-SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC
T ss_pred EEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC-CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc
Confidence 5778889998 7999999999998764 223322333 46999999999999975 55799999999999884
Q ss_pred EEEeecCCCcCceeeeeeeccCC
Q psy15157 321 LIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..+..+........+.+++++.
T Consensus 304 ~~~l~~~~~~~~v~~~~~sp~~~ 326 (402)
T 2aq5_A 304 LHYLSMFSSKESQRGMGYMPKRG 326 (402)
T ss_dssp EEEEEEECCSSCCSEEEECCGGG
T ss_pred eEeecccccCCcccceEEecccc
Confidence 66676665555666677776653
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-29 Score=232.34 Aligned_cols=205 Identities=27% Similarity=0.469 Sum_probs=177.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
+...+.+|...|++++|+|+++++++|+.||.|++||.. ...+..+.+|...|.+++|+|+
T Consensus 336 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-------------------~~~~~~~~~~~~~v~~~~~s~d 396 (577)
T 2ymu_A 336 HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-------------------GQLLQTLTGHSSSVRGVAFSPD 396 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-------------------CCEEEEEECCSSCEEEEEECTT
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-------------------CCEEEEecCCCCCeEEEEECCC
Confidence 345578999999999999999999999999999999964 3457788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
+++|++++.|+.|++||.. ++.. .....|...|++++|+|+++++++++.|+.+++|
T Consensus 397 g~~l~~~~~d~~v~~~~~~-~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~ 473 (577)
T 2ymu_A 397 GQTIASASDDKTVKLWNRN-GQLL--QTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGV 473 (577)
T ss_dssp SSCEEEEETTSEEEEECTT-CCEE--EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCEEEEEeCC-CCEE--EEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEE
Confidence 9999999999999999964 3332 2335678899999999999999999999999998
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+|+++++++++.|+.|++||. +++++..+. .|. ..|++++|+|+|++|++++.||.|++||. +++++..+.+|.
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~-~h~-~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~ 549 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHS-SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS 549 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEET-TSCEEEEEE-CCS-SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS
T ss_pred EEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe-CCC-CCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCC
Confidence 789999999999999999994 677888886 444 46999999999999999999999999996 789999999987
Q ss_pred CcCceeeeeeeccCC
Q psy15157 329 SMGQQFELTLTVDAD 343 (344)
Q Consensus 329 ~~~~~~~~~~~~~~~ 343 (344)
... ..+.|++|++
T Consensus 550 ~~v--~~~~fs~dg~ 562 (577)
T 2ymu_A 550 SSV--WGVAFSPDGQ 562 (577)
T ss_dssp SCE--EEEEECTTSS
T ss_pred CCE--EEEEEcCCCC
Confidence 554 4556677764
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-28 Score=211.23 Aligned_cols=203 Identities=16% Similarity=0.278 Sum_probs=171.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+|...|++++|+|+++++++++.||.|++||+.+. .......+..|...|.+++|+|++++|+
T Consensus 94 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 157 (337)
T 1gxr_A 94 LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP----------------TPRIKAELTSSAPACYALAISPDSKVCF 157 (337)
T ss_dssp SCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC------------------EEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC----------------CcceeeecccCCCceEEEEECCCCCEEE
Confidence 389999999999999999999999999999999642 2235667788999999999999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCC
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSD 253 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~ 253 (344)
+++.||.|++||+++++....+ ..+...+.+++|+|+++++++++.++.+++| +|+
T Consensus 158 ~~~~dg~v~~~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 158 SCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp EEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTT
T ss_pred EEeCCCcEEEEeCCCCceeeee--ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCC
Confidence 9999999999999987654333 3477889999999999999999999999998 689
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCce
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 333 (344)
++++++++.|+.|++||+++++... +. .|. ..|.+++|+|++++|++++.||.|++||+.+++.+...... ...
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~~~~-~~-~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~---~~v 309 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPDKYQ-LH-LHE-SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES---SSV 309 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSCEEE-EC-CCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS---SCE
T ss_pred CCEEEEEcCCCcEEEEECCCCCeEE-Ec-CCc-cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCC---CcE
Confidence 9999999999999999999887653 33 343 47999999999999999999999999999999988665432 234
Q ss_pred eeeeeeccC
Q psy15157 334 FELTLTVDA 342 (344)
Q Consensus 334 ~~~~~~~~~ 342 (344)
..+.+++++
T Consensus 310 ~~~~~s~~~ 318 (337)
T 1gxr_A 310 LSCDISVDD 318 (337)
T ss_dssp EEEEECTTS
T ss_pred EEEEECCCC
Confidence 455555554
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-29 Score=236.65 Aligned_cols=195 Identities=23% Similarity=0.391 Sum_probs=167.2
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|...|++++|+|++++|++|+.||+|+|||+.+ ......+.+|...|.+++|+|+
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~------------------~~~~~~~~~h~~~v~~~~~s~~ 483 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA------------------GVSTRRFVGHTKDVLSVAFSLD 483 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------TEEEEEEECCSSCEEEEEECTT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC------------------CcceeEEeCCCCCEEEEEEeCC
Confidence 3456789999999999999999999999999999999953 4566788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccce-eeeccccceEEEEEecCC--CEEEEEeCCCEEEEE-----------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAH-KTIQESTFVRCLSFHPCG--DYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~l~~~~~~~~i~~~----------------- 250 (344)
+++|+||+.|++|++||.......... ....|...|.+++|+|++ ..+++++.|+.|++|
T Consensus 484 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~ 563 (694)
T 3dm0_A 484 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY 563 (694)
T ss_dssp SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC
Confidence 999999999999999998654221111 113467789999999986 689999999999998
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+|+++++++|+.||.|++||+++++.+..+.. + ..|.+++|+|++.+|++++ |+.|++||+++++.+..+
T Consensus 564 v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~--~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 564 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-N--SVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-S--SCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-C--CcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhh
Confidence 78999999999999999999999998887752 2 3699999999999887776 566999999999999888
Q ss_pred ecC
Q psy15157 325 TGA 327 (344)
Q Consensus 325 ~~~ 327 (344)
..+
T Consensus 640 ~~~ 642 (694)
T 3dm0_A 640 KVD 642 (694)
T ss_dssp CCC
T ss_pred ccc
Confidence 654
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-29 Score=220.74 Aligned_cols=207 Identities=17% Similarity=0.242 Sum_probs=174.8
Q ss_pred cCCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CC
Q psy15157 117 SHKSPCRAGAFSID----GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~----~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 191 (344)
.|...|++++|+|+ +++|++|+.||.|++||+.+ ...+..+.+|...|.+++|+| ++
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~------------------~~~~~~~~~~~~~i~~~~~~~~~~ 128 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT------------------MQCIKHYVGHGNAINELKFHPRDP 128 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT------------------CCEEEEEESCCSCEEEEEECSSCT
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh------------------ceEeeeecCCCCcEEEEEECCCCC
Confidence 37788999999998 67999999999999999853 456778889999999999999 89
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceee-eccccceEEEEEecCCCEEEEEeCCCEEEEEcCC-----------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKT-IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD----------------- 253 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~----------------- 253 (344)
.+|++|+.||.|++||+++++....+.. ..+...|.+++|+|++.++++++.|+.+++|+..
T Consensus 129 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 208 (366)
T 3k26_A 129 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPN 208 (366)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGG
T ss_pred CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCC
Confidence 9999999999999999998765443321 3578899999999999999999999999999433
Q ss_pred --------------------------------CCEEEEEeCCCcEEEEeCCCCeE--------------EeeecccCCCc
Q psy15157 254 --------------------------------GRIYCSGSKDGDIKIWDGVSSKC--------------VATFSKAHDGA 287 (344)
Q Consensus 254 --------------------------------~~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~ 287 (344)
+.++++++.|+.|++||++++.. +..+. .|. .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~ 286 (366)
T 3k26_A 209 KTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQ-C 286 (366)
T ss_dssp GCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSS-C
T ss_pred CCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-ccC-C
Confidence 78999999999999999887643 44554 333 4
Q ss_pred cEEEEEEccC--CCEEEEEeCCCcEEEEEcCCCe----eEEEeecCCCcCceeeeeeeccCC
Q psy15157 288 EISSLTFTRN--GKYLLSSGKDSLVKLWELSSAR----CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 288 ~v~~i~~~~~--~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.|.+++|+|+ +++|++|+.||.|++||+.+++ .+..+.+|........+.+++++.
T Consensus 287 ~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 287 DIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS 348 (366)
T ss_dssp CSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS
T ss_pred cEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC
Confidence 6899999999 9999999999999999999986 445788886666777778877764
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-28 Score=209.70 Aligned_cols=212 Identities=15% Similarity=0.188 Sum_probs=172.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
.....+|.+.|++++|+|+++++++++ ||.|++||+.+.... ..........|...|.+++|+|++
T Consensus 44 ~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~-------------~~~~~~~~~~~~~~v~~~~~~~~~ 109 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK-------------SPVSQLDCLNRDNYIRSCKLLPDG 109 (337)
T ss_dssp EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC-------------SCSEEEECSCTTSBEEEEEECTTS
T ss_pred cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce-------------eeeecccccCCCCcEEEEEEcCCC
Confidence 334458999999999999999999999 999999999753111 011122334799999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
++|++++.||.|++||+.+++.........+...+.+++|+|+++++++++.++.+++|
T Consensus 110 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~ 189 (337)
T 1gxr_A 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 189 (337)
T ss_dssp SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEE
Confidence 99999999999999999987644444555677889999999999999999999999998
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+|++.++++++.||.|++||+++++.+..+. +. ..+.+++|+|++++|++++.|+.|++||+++++.. .+..|.
T Consensus 190 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~-~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~ 265 (337)
T 1gxr_A 190 DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD--FT-SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHE 265 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CS-SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCS
T ss_pred EECCCCCEEEEEecCCcEEEEECCCCceEeeec--CC-CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCc
Confidence 6889999999999999999999999887774 22 46999999999999999999999999999988764 455554
Q ss_pred CcCceeeeeeeccCC
Q psy15157 329 SMGQQFELTLTVDAD 343 (344)
Q Consensus 329 ~~~~~~~~~~~~~~~ 343 (344)
.. ...+.++++++
T Consensus 266 ~~--v~~~~~~~~~~ 278 (337)
T 1gxr_A 266 SC--VLSLKFAYCGK 278 (337)
T ss_dssp SC--EEEEEECTTSS
T ss_pred cc--eeEEEECCCCC
Confidence 43 44555555543
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-29 Score=215.17 Aligned_cols=240 Identities=19% Similarity=0.314 Sum_probs=174.3
Q ss_pred CCCCCCccch-hcccCCCceeeec-CCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcc
Q psy15157 75 EPSIGLNPIQ-EILIGPGLDLEFE-SDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRML 152 (344)
Q Consensus 75 ~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~ 152 (344)
+.++.+.|.. ..+++++.|-... .+.. ............+.+|...|++++|+|++++|++|+.|+.|++|+.....
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~-~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~ 119 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLT-RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 119 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEEC-CSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECC-CCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccc
Confidence 3455666653 4565555432211 1111 11112233456788999999999999999999999999999999997543
Q ss_pred ccccCCCC------------------------CCcCCC-CCCceEEEecCCcCCeEEEEEcCCC--CEEEEEeCCCcEEE
Q psy15157 153 AKSSMESS------------------------EPQNDQ-QGHPVIRTLYDHIEEVTCLEFHPSA--PILASGSKDKTVKM 205 (344)
Q Consensus 153 ~~~~~~~~------------------------~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~dg~i~i 205 (344)
........ ...++. ..........+|...+.+++|++++ .++++++.|+.|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 120 TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 22111100 001111 1223344567899999999999865 47899999999999
Q ss_pred EEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCC
Q psy15157 206 FDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKD 263 (344)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~d 263 (344)
||+++++.... ...|...|++++|+|++++|++|+.|+.+++| +|++. +++++.|
T Consensus 200 ~d~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d 276 (340)
T 4aow_A 200 WNLANCKLKTN--HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY-WLCAATG 276 (340)
T ss_dssp EETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSS-EEEEEET
T ss_pred EECCCCceeeE--ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCc-eeeccCC
Confidence 99998765433 34678899999999999999999999999999 45554 4567789
Q ss_pred CcEEEEeCCCCeEEeeecc--------cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 264 GDIKIWDGVSSKCVATFSK--------AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~--------~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+.|++||++++..+..+.. .|. ..|++++|+|+|++|++|+.||.|+|||+++|+
T Consensus 277 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDELKQEVISTSSKAEP-PQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TEEEEEETTTTEEEEEECCC-------CCC-CCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CEEEEEECCCCeEEEeccccceeeeccCCC-CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9999999999887766542 233 469999999999999999999999999999985
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-29 Score=240.66 Aligned_cols=213 Identities=20% Similarity=0.294 Sum_probs=170.9
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-- 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-- 190 (344)
.++.+|.+.|++++|+|++++|++|+.||.|+|||+.+ ........+.+|.+.|++++|+|+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~----------------~~~~~~~~l~~h~~~V~~l~~s~~~~ 66 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG----------------ETHKLIDTLTGHEGPVWRVDWAHPKF 66 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEET----------------TEEEEEEEECCCSSCEEEEEECCTTS
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCC----------------CCCccceeccCCcCceEEEEecCCCC
Confidence 35689999999999999999999999999999999852 234567788999999999999988
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--CCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--GDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~i~~~------------------ 250 (344)
+++|++|+.||.|++||+.+++.........|...|.+++|+|+ +.++++|+.|+.+++|
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 89999999999999999998764444555668889999999999 9999999999999998
Q ss_pred -------cC-------------CCCEEEEEeCCCcEEEEeCCCC----eEEeeecccCCCccEEEEEEccC---CCEEEE
Q psy15157 251 -------SS-------------DGRIYCSGSKDGDIKIWDGVSS----KCVATFSKAHDGAEISSLTFTRN---GKYLLS 303 (344)
Q Consensus 251 -------~~-------------~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~v~~i~~~~~---~~~l~s 303 (344)
+| ++.++++|+.||.|++||++++ .....+. .|. ..|++++|+|+ +++|++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~-~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHS-DWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCS-SCEEEEEECCCCSSSEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCC-CcEEEEEeccCCCCCCEEEE
Confidence 34 5889999999999999999877 4444554 444 47999999999 999999
Q ss_pred EeCCCcEEEEEcCCCeeE---EEeecCCCcCceeeeeeeccCC
Q psy15157 304 SGKDSLVKLWELSSARCL---IAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|+.||.|++||+++++.. ..+...........+.+++++.
T Consensus 225 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 267 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (753)
T ss_dssp EESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC
T ss_pred EecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC
Confidence 999999999999987421 1122222333445556666553
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-28 Score=217.97 Aligned_cols=189 Identities=20% Similarity=0.298 Sum_probs=165.2
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.| ..+....|++++++|++|+.||.|++||+.+ ......+.+|.+.|++++|+|++++|++
T Consensus 96 ~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s 156 (420)
T 3vl1_A 96 RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF------------------NLQREIDQAHVSEITKLKFFPSGEALIS 156 (420)
T ss_dssp SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS------------------CEEEEETTSSSSCEEEEEECTTSSEEEE
T ss_pred cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC------------------cceeeecccccCccEEEEECCCCCEEEE
Confidence 44 4556667899999999999999999999853 4456677899999999999999999999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------------
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------------- 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------------- 251 (344)
|+.||.|++||+.+++....+ ..|...|.+++|+|++.+|++++.|+.+++|+
T Consensus 157 ~s~d~~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 157 SSQDMQLKIWSVKDGSNPRTL--IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EETTSEEEEEETTTCCCCEEE--ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EeCCCeEEEEeCCCCcCceEE--cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 999999999999988655433 46888999999999999999999999999992
Q ss_pred ----------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEeCCC
Q psy15157 252 ----------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSGKDS 308 (344)
Q Consensus 252 ----------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg 308 (344)
|+++++++|+.||.|++||+++++.+..+...|. ..|.+++|+|+++ +|++|+.||
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT-CSCNSLTVDGNNANYIYAGYENG 313 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS-SCEEEEEECSSCTTEEEEEETTS
T ss_pred ecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC-CCceeEEEeCCCCCEEEEEeCCC
Confidence 5788999999999999999999998888765554 4799999999999 999999999
Q ss_pred cEEEEEcCCCee-EEEeecC
Q psy15157 309 LVKLWELSSARC-LIAYTGA 327 (344)
Q Consensus 309 ~i~vwd~~~~~~-~~~~~~~ 327 (344)
.|++||+++++. +..+.+|
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~ 333 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLIN 333 (420)
T ss_dssp EEEEEETTCTTSCSEEEEES
T ss_pred eEEEEEcCCCcCchhhhhcc
Confidence 999999999754 7778774
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-29 Score=224.26 Aligned_cols=205 Identities=19% Similarity=0.323 Sum_probs=165.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc------------CCeEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI------------EEVTC 184 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~ 184 (344)
.|.+.|++++|+|+|++||+|+.||.|+|||+.+...... ...........+.+|. ..|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~-------~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~ 98 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQS-------HSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 98 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----C-------CCCCCEEEEEEEECCCCEEEGGGTEEECCCCCE
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCc-------ccccceeEecccccccccccccccccccCceEE
Confidence 4778999999999999999999999999999975321110 0112234577888998 88999
Q ss_pred EEEcCCC--CEEEEEeCCCcEEEEEcCCCccccc--------------------------------------eeeecccc
Q psy15157 185 LEFHPSA--PILASGSKDKTVKMFDYSKSSVRKA--------------------------------------HKTIQEST 224 (344)
Q Consensus 185 ~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~--------------------------------------~~~~~~~~ 224 (344)
++|+|++ ..|++++.||+|++||+.++..... .....|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 9999998 7999999999999999976432100 11235788
Q ss_pred ceEEEEEecCCCEEEEEeCCCEEEEE-------------------------------cCCC-CEEEEEeCCCcEEEEeCC
Q psy15157 225 FVRCLSFHPCGDYMVVGTDHFVLRLY-------------------------------SSDG-RIYCSGSKDGDIKIWDGV 272 (344)
Q Consensus 225 ~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------------------~~~~-~~l~~~~~dg~i~iwd~~ 272 (344)
.|.+++|+|++++|++| .|+.+++| +|++ .++++|+.||.|++||++
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred ceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 89999999999999999 79999998 5677 899999999999999999
Q ss_pred CCeE----EeeecccCCC-----------ccEEEEEEccCCCEEEEEeCCCcEEEEEcCC-CeeEEEeecCCCcC
Q psy15157 273 SSKC----VATFSKAHDG-----------AEISSLTFTRNGKYLLSSGKDSLVKLWELSS-ARCLIAYTGAGSMG 331 (344)
Q Consensus 273 ~~~~----~~~~~~~~~~-----------~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~ 331 (344)
+++. +..+. .+.. ..|.+++|+|+|++|++++. +.|++||+++ ++++..+.+|....
T Consensus 258 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 258 ASALCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TCSSSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred CCccccceeeEec-cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 9876 55554 3332 26999999999999999998 9999999998 99999999986543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-28 Score=219.15 Aligned_cols=201 Identities=25% Similarity=0.435 Sum_probs=173.1
Q ss_pred ceeEEecCCCce-EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPC-RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v-~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
....+.+|.+.| .++.| +++++++|+.||+|++||+.+ ...+..+.+|.+.|.+++|+|
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~------------------~~~~~~~~~h~~~V~~l~~~~ 172 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN------------------KKFLLQLSGHDGGVWALKYAH 172 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEECS
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC------------------CcEEEEEeCCCcCEEEEEEcC
Confidence 345678998885 66666 578999999999999999853 456788899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEe--cCCCEEEEEeCCCEEEEEcC---------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH--PCGDYMVVGTDHFVLRLYSS--------------- 252 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~~i~~~~~--------------- 252 (344)
++ .|++|+.||+|++||+.+++.... ...|...|.+++|+ +++.++++|+.|+.+++|+.
T Consensus 173 ~~-~l~s~s~dg~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (464)
T 3v7d_B 173 GG-ILVSGSTDRTVRVWDIKKGCCTHV--FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp TT-EEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred CC-EEEEEeCCCCEEEEECCCCcEEEE--ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence 88 999999999999999998865433 34588899999998 57899999999999999942
Q ss_pred -----------------------------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 253 -----------------------------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 253 -----------------------------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
++.++++|+.||.|++||+++++++..+. .|. ..|.+++|+|++++|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~s 327 (464)
T 3v7d_B 250 PLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHT-DRIYSTIYDHERKRCIS 327 (464)
T ss_dssp SEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCS-SCEEEEEEETTTTEEEE
T ss_pred ceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCC-CCEEEEEEcCCCCEEEE
Confidence 36789999999999999999999998886 344 46999999999999999
Q ss_pred EeCCCcEEEEEcCCCeeEEEeecCCCcCceeee
Q psy15157 304 SGKDSLVKLWELSSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 336 (344)
|+.||.|++||+++++++..+.+|......+.+
T Consensus 328 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 360 (464)
T 3v7d_B 328 ASMDTTIRIWDLENGELMYTLQGHTALVGLLRL 360 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEE
Confidence 999999999999999999999998776655443
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-28 Score=214.64 Aligned_cols=193 Identities=19% Similarity=0.258 Sum_probs=163.8
Q ss_pred ceeEEecCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
....+.+|.+.|++++|+++ +++|++|+.||.|++||+.+. .......+..|...|.+++|+
T Consensus 47 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----------------~~~~~~~~~~~~~~v~~~~~~ 110 (379)
T 3jrp_A 47 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG----------------RWSQIAVHAVHSASVNSVQWA 110 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT----------------EEEEEEEECCCSSCEEEEEEC
T ss_pred eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC----------------ceeEeeeecCCCcceEEEEeC
Confidence 34567899999999999987 999999999999999999642 123567788899999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-------------CCCEEEEEeCCCEEEEE---
Q psy15157 189 PS--APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-------------CGDYMVVGTDHFVLRLY--- 250 (344)
Q Consensus 189 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~~~i~~~--- 250 (344)
|+ +.+|++++.||.|++||+++...........+...|.+++|+| ++.++++++.++.|++|
T Consensus 111 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 190 (379)
T 3jrp_A 111 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190 (379)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred CCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence 99 8999999999999999999876555555667888999999999 69999999999999998
Q ss_pred ------------------------cCC---CCEEEEEeCCCcEEEEeCCCCe---EEeeecccCCCccEEEEEEccCCCE
Q psy15157 251 ------------------------SSD---GRIYCSGSKDGDIKIWDGVSSK---CVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 251 ------------------------~~~---~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+|+ +.++++++.||.|++||++++. ....+........|.+++|+|++++
T Consensus 191 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 191 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 270 (379)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC
T ss_pred CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCE
Confidence 678 8999999999999999998863 2222221222357999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCe
Q psy15157 301 LLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~ 319 (344)
|++++.||.|++|++..+.
T Consensus 271 l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 271 LALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEEESSSSEEEEEEEETT
T ss_pred EEEecCCCcEEEEeCCCCC
Confidence 9999999999999998554
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-28 Score=218.90 Aligned_cols=216 Identities=20% Similarity=0.283 Sum_probs=166.3
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC----------------------CcC-CCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE----------------------PQN-DQQGH 169 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~----------------------~~~-~~~~~ 169 (344)
..+.+|...|++++|+|+|++||+|+.||+|+|||+.++.......... ... .....
T Consensus 141 ~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 141 LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 3446788999999999999999999999999999998764433222110 000 12234
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc--ceeeeccccceEEEEEecCCC-EEEE--EeCC
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGD-YMVV--GTDH 244 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~~ 244 (344)
..+..+.+|...+..+.|+|++.++++++.|+.+++||..+++... ......+...|.+++|+|.+. .+++ |+.|
T Consensus 221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 5567788999999999999999999999999999999998765322 233445778899999999765 4444 3578
Q ss_pred CEEEEE----------------------cCCCCEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 245 FVLRLY----------------------SSDGRIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 245 ~~i~~~----------------------~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+.|++| ++++..+++++ .|+.|+|||+.+++++..+. +|. ..|++++|+|+|++
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~-gH~-~~V~~l~~spdg~~ 378 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHT-SRVLSLTMSPDGAT 378 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSC
T ss_pred CEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc-CCC-CCEEEEEEcCCCCE
Confidence 999998 57778887765 78999999999999999987 455 47999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 301 LLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
|+||+.|++|++||+....+....+.+...
T Consensus 379 l~S~s~D~tvriWdv~~~~~~~~~~~~~~~ 408 (420)
T 4gga_A 379 VASAAADETLRLWRCFELDPARRREREKAS 408 (420)
T ss_dssp EEEEETTTEEEEECCSCSSCC---------
T ss_pred EEEEecCCeEEEEECCCCCccchhhhccCC
Confidence 999999999999999888777666655443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-28 Score=222.26 Aligned_cols=206 Identities=17% Similarity=0.252 Sum_probs=164.5
Q ss_pred ceeEE-ecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYV-TSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~-~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
....+ .+|.+.|++++|+| ++++|++|+.||+|+|||+.+.... ........+ .|.+.|.+++|+
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~------------~~~~~~~~~-~h~~~v~~~~~~ 120 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG------------EVYSSSLTY-DCSSTVTQITMI 120 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT------------CCCSCSEEE-ECSSCEEEEEEC
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC------------cccceeeec-cCCCCEEEEEEe
Confidence 44556 88999999999999 9999999999999999998642110 001112222 489999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcC---CCcccccee--------eec--cccceEEEE--EecCCCEEEEEeCCCEEEEE---
Q psy15157 189 PSAPILASGSKDKTVKMFDYS---KSSVRKAHK--------TIQ--ESTFVRCLS--FHPCGDYMVVGTDHFVLRLY--- 250 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~--------~~~--~~~~v~~~~--~~~~~~~l~~~~~~~~i~~~--- 250 (344)
|++.+|++|+.||.|++||+. +++...... ... +...+.++. +++++.++++|+.++.|++|
T Consensus 121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999995 333222111 111 345566666 55789999999999999998
Q ss_pred ----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc----CCCEEEEE
Q psy15157 251 ----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR----NGKYLLSS 304 (344)
Q Consensus 251 ----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~----~~~~l~s~ 304 (344)
+|++.++++|+.||.|++||+++++++..+...+. ..|.+++|+| ++.+|++|
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~s~~~~~l~s~ 279 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH-APITHVEVCQFYGKNSVIVVGG 279 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC-EEEEEEEECTTTCTTEEEEEEE
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC-CceEEEEeccccCCCccEEEEE
Confidence 67899999999999999999999999988764444 4799996654 68899999
Q ss_pred eCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 305 GKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
+.||.|++||+++++++..+.+|...
T Consensus 280 ~~dg~i~iwd~~~~~~~~~~~~~~~~ 305 (437)
T 3gre_A 280 SSKTFLTIWNFVKGHCQYAFINSDEQ 305 (437)
T ss_dssp STTEEEEEEETTTTEEEEEEESSSSC
T ss_pred cCCCcEEEEEcCCCcEEEEEEcCCCC
Confidence 99999999999999999999987543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-28 Score=215.65 Aligned_cols=204 Identities=16% Similarity=0.259 Sum_probs=173.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
|.+.|++++|+|++++|++|+.||.|++||.. ......+..|...|.+++|+|++++|+++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-------------------GALLNVLNFHRAPIVSVKWNKDGTHIISM 167 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-------------------SCEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-------------------CCeeeeccCCCccEEEEEECCCCCEEEEE
Confidence 78899999999999999999999999999943 34677888999999999999999999999
Q ss_pred eCCCcEEEEEcCCCccccce------------------------------------------------------eeeccc
Q psy15157 198 SKDKTVKMFDYSKSSVRKAH------------------------------------------------------KTIQES 223 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~------------------------------------------------------~~~~~~ 223 (344)
+.||.|++||+.+++....+ ....+.
T Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~ 247 (425)
T 1r5m_A 168 DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHH 247 (425)
T ss_dssp ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCS
T ss_pred ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCC
Confidence 99999999999776432211 112356
Q ss_pred cceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 224 TFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 224 ~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
..|.+++|+|+++++++++.++.+++| ++++ ++++++.|+.|++||+++++.+..+
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 789999999999999999999999998 5677 9999999999999999999988888
Q ss_pred cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe--------------------eEEEeecCCCcCceeeeeeec
Q psy15157 281 SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR--------------------CLIAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 281 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~ 340 (344)
.. +. ..|.+++|+|++++|++++.||.|++||+++++ ++..+.+|........+.+++
T Consensus 327 ~~-~~-~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 327 IV-DG-VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp EC-TT-CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT
T ss_pred cc-CC-ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC
Confidence 63 33 479999999999999999999999999999988 899999885532455666666
Q ss_pred cCC
Q psy15157 341 DAD 343 (344)
Q Consensus 341 ~~~ 343 (344)
++.
T Consensus 405 ~~~ 407 (425)
T 1r5m_A 405 AGN 407 (425)
T ss_dssp TSS
T ss_pred CCc
Confidence 653
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-29 Score=214.41 Aligned_cols=228 Identities=19% Similarity=0.235 Sum_probs=168.3
Q ss_pred CCCCccchhcccCCCceeee-cCCCCCCCCCCCccceeEEecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccc
Q psy15157 77 SIGLNPIQEILIGPGLDLEF-ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLA 153 (344)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~ 153 (344)
++.++|....++.++.+-.. ..+... ........+.+|.+.|++++|++ ++++|++|+.|++|++||++++
T Consensus 18 ~v~~s~~g~~lasgs~D~~v~lwd~~~----~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~-- 91 (316)
T 3bg1_A 18 DAQMDYYGTRLATCSSDRSVKIFDVRN----GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG-- 91 (316)
T ss_dssp EEEECGGGCEEEEEETTTEEEEEEEET----TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS--
T ss_pred EeeEcCCCCEEEEEeCCCeEEEEEecC----CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC--
Confidence 44566666666665543211 111110 01123456789999999999986 4899999999999999998631
Q ss_pred cccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCcccc-ceeeeccccceEEEE
Q psy15157 154 KSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS--APILASGSKDKTVKMFDYSKSSVRK-AHKTIQESTFVRCLS 230 (344)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~ 230 (344)
.......+.+|...|.+++|+|+ +.+|++|+.||+|++||++.+.... ......|...+.+++
T Consensus 92 --------------~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (316)
T 3bg1_A 92 --------------TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157 (316)
T ss_dssp --------------CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCE
T ss_pred --------------cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEE
Confidence 12456678899999999999998 7799999999999999998753211 122235677899999
Q ss_pred EecC-----------------CCEEEEEeCCCEEEEE--------------------------cCCC----CEEEEEeCC
Q psy15157 231 FHPC-----------------GDYMVVGTDHFVLRLY--------------------------SSDG----RIYCSGSKD 263 (344)
Q Consensus 231 ~~~~-----------------~~~l~~~~~~~~i~~~--------------------------~~~~----~~l~~~~~d 263 (344)
|+|+ +.+|++|+.|+.|++| +|++ .+|++|+.|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D 237 (316)
T 3bg1_A 158 WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD 237 (316)
T ss_dssp ECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT
T ss_pred EccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC
Confidence 9997 4789999999999988 3444 789999999
Q ss_pred CcEEEEeCCCC---eE-EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC-C--eeEEEeec
Q psy15157 264 GDIKIWDGVSS---KC-VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS-A--RCLIAYTG 326 (344)
Q Consensus 264 g~i~iwd~~~~---~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~-~--~~~~~~~~ 326 (344)
++|++||+.+. .. ...+. .|. ..|.+++|+|++++|++++.|+.|++|+... + .++..+..
T Consensus 238 ~~v~iw~~~~~~~~~~~~~~~~-~~~-~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 238 GRVFIWTCDDASSNTWSPKLLH-KFN-DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp CEEEEEECSSTTCCCCBCCEEE-ECS-SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred CeEEEEEccCccccchhhhhhh-cCC-CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 99999998762 11 11222 343 4799999999999999999999999999863 3 45555553
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-28 Score=236.17 Aligned_cols=208 Identities=16% Similarity=0.330 Sum_probs=182.2
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|++++|++|+.||.|+|||+.+ +..+..+.+|.+.|.+++|+|++
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~------------------~~~~~~~~~~~~~v~~~~~s~~~ 67 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET------------------QVEVRSIQVTETPVRAGKFIARK 67 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT------------------TEEEEEEECCSSCEEEEEEEGGG
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC------------------CceEEEEecCCCcEEEEEEeCCC
Confidence 456789999999999999999999999999999999853 45677888999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
++|++|+.||.|++||+.+++....+ ..|...|++++|+|++.++++++.++.+++|
T Consensus 68 ~~l~~~~~dg~i~vw~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDF--EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (814)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEE--ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEE
Confidence 99999999999999999988654433 4578899999999999999999999999998
Q ss_pred ---cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc--CCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 ---SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR--NGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ---~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
+| ++..+++++.||.|++||+.++.....+..++. ..+.+++|+| ++.+|++++.||.|++||+++++++..+
T Consensus 146 ~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 224 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224 (814)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCT-TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCC-CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE
Confidence 56 788999999999999999998887777764443 4699999999 9999999999999999999999999999
Q ss_pred ecCCCcCceeeeeeeccC
Q psy15157 325 TGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~ 342 (344)
.+|.... ..+.+++++
T Consensus 225 ~~~~~~v--~~~~~~~~~ 240 (814)
T 3mkq_A 225 EGHMSNV--SFAVFHPTL 240 (814)
T ss_dssp ECCSSCE--EEEEECSSS
T ss_pred cCCCCCE--EEEEEcCCC
Confidence 9886543 444455554
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-28 Score=206.98 Aligned_cols=187 Identities=22% Similarity=0.350 Sum_probs=155.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP- 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~- 189 (344)
....+.+|.+.|++++|+|++++|++|+.|++|++||+.+ .......+.+|...|.+++|+|
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~-----------------~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN-----------------NWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG-----------------TTEEEEEECCCCSCEEEEEECTT
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC-----------------CcchhhhhcccCCcEEEEEECCC
Confidence 3456789999999999999999999999999999999863 2345677899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE-----------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~----------------- 250 (344)
++..|++|+.||+|++||+++........ ..+...+..+.|+| ++.++++|+.|+.|++|
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~ 230 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN 230 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCC
Confidence 57899999999999999998765433322 23556788899987 67899999999999999
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC--EEEEEeCCCcEEEEEcCCC
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK--YLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~l~s~~~dg~i~vwd~~~~ 318 (344)
+|++.+|++|+.||.|++||..+++....+.. +. ..+.+++|+|++. ++++|++| .+.+|++...
T Consensus 231 v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~~ 303 (304)
T 2ynn_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV-GL-ERSWCIATHPTGRKNYIASGFDN-GFTVLSLGND 303 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-SS-SSEEEEEECTTCGGGCEEEEETT-EEEEEECC--
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC-CC-ccEEEEEECCCCCceEEEEecCC-ceEEEEeccC
Confidence 78899999999999999999999999988874 33 3699999999875 57777655 4778887653
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-28 Score=208.90 Aligned_cols=204 Identities=20% Similarity=0.304 Sum_probs=166.1
Q ss_pred ceeEEecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
....+.+|...|++++|+| ++++|++|+.||.|++||+.+..... ..........+..|...|.+++|+
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~ 119 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEEC---------SGRRWNKLCTLNDSKGSLYSVKFA 119 (351)
T ss_dssp EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTT---------SSCSEEEEEEECCCSSCEEEEEEC
T ss_pred ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccc---------cccCcceeeeecccCCceeEEEEc
Confidence 3455689999999999999 69999999999999999997532110 011225677888999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEEcCCCccccceee-----------eccccceEEEEEecC---CCEEEEEeCCCEEEEE--
Q psy15157 189 PS--APILASGSKDKTVKMFDYSKSSVRKAHKT-----------IQESTFVRCLSFHPC---GDYMVVGTDHFVLRLY-- 250 (344)
Q Consensus 189 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~~-- 250 (344)
|+ +.+|++++.||.|++||+++++....+.. ..+...+.+++|+|+ +.++++++.++.+.+|
T Consensus 120 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~ 199 (351)
T 3f3f_A 120 PAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRG 199 (351)
T ss_dssp CGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEEC
T ss_pred CCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEcc
Confidence 99 99999999999999999998765443321 145678999999997 9999999999888665
Q ss_pred -----------------------cCCC----CEEEEEeCCCcEEEEeCCCC-----------------------------
Q psy15157 251 -----------------------SSDG----RIYCSGSKDGDIKIWDGVSS----------------------------- 274 (344)
Q Consensus 251 -----------------------~~~~----~~l~~~~~dg~i~iwd~~~~----------------------------- 274 (344)
+|++ .+|++|+.||.|++||++.+
T Consensus 200 ~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
T 3f3f_A 200 KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGR 279 (351)
T ss_dssp TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------------------------
T ss_pred CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccc
Confidence 6787 89999999999999998865
Q ss_pred -----------------eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 275 -----------------KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 275 -----------------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+.+..+. .|. ..|++++|+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 280 SDSNTEEKAELQSNLQVELLSEHD-DHN-GEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp -----------CCSEEEEEEEEEC-TTS-SCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred cccccceeeeecccccccEEEEEe-ccc-ccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 4444454 344 469999999999999999999999999999886555443
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-28 Score=207.58 Aligned_cols=205 Identities=21% Similarity=0.313 Sum_probs=162.8
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC-----------------------CcCCCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE-----------------------PQNDQQGH 169 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~-----------------------~~~~~~~~ 169 (344)
..+.+|...|++++|+|++++|++|+.||+|++||++++.......... ........
T Consensus 61 ~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 61 LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp EECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCc
Confidence 3456889999999999999999999999999999998765433221110 00112334
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc--ceeeeccccceEEEEEecCCCEEE---EEeCC
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGDYMV---VGTDH 244 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~---~~~~~ 244 (344)
..+..+.+|...+..+.+++++++|++++.||.|++||+++++... ......+...|.++.++|.+..++ .++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 5667788999999999999999999999999999999998875432 223344667899999999766443 45678
Q ss_pred CEEEEE----------------------cCCCCEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 245 FVLRLY----------------------SSDGRIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 245 ~~i~~~----------------------~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+.+++| .+++..+++++ .|+.|++||+++++++..+. +|. ..|++++|+|+|++
T Consensus 221 ~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~-gH~-~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHT-SRVLSLTMSPDGAT 298 (318)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSC
T ss_pred CEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc-CCC-CCEEEEEEcCCCCE
Confidence 899998 56677776654 79999999999999999987 454 47999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCe
Q psy15157 301 LLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~ 319 (344)
|+|||.||+|+|||+....
T Consensus 299 l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 299 VASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEETTTEEEEECCSCCC
T ss_pred EEEEecCCeEEEEECCCCC
Confidence 9999999999999997653
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=209.75 Aligned_cols=195 Identities=16% Similarity=0.138 Sum_probs=138.5
Q ss_pred CCCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCcccccc-C---CCCCCcCC-CCCCceEEEecCCcCCeEEEEEc
Q psy15157 118 HKSPCRAGAFSID----GQLCATGSVDASIKILDVDRMLAKSS-M---ESSEPQND-QQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 118 h~~~v~~~~~s~~----~~~l~sg~~dg~v~iwd~~~~~~~~~-~---~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
|...|+.++|+|+ ++++++++.+ +++|++.++..... . +....... ...++.+..+.+|...++.++|+
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFA 187 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEee
Confidence 4457888888888 8888887742 44555543322111 0 11111111 13356677788899999999999
Q ss_pred C---CCCEEEEEeCCCcEEEEEcCCCccccceeeec-cccceEEEEEecCCCEE------------EEEeCCCEEEEEcC
Q psy15157 189 P---SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFHPCGDYM------------VVGTDHFVLRLYSS 252 (344)
Q Consensus 189 ~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l------------~~~~~~~~i~~~~~ 252 (344)
+ ++..|++|+.|++|+|||+.+++....+.... +...+.+++|+|+|.++ ++|+.|+++++|++
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~ 267 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINP 267 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEET
T ss_pred ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEEC
Confidence 8 67899999999999999999998766654211 23467888999999987 45778999999963
Q ss_pred --------------CCC------------EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 253 --------------DGR------------IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 253 --------------~~~------------~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+|+ ++++|+.|++|+|||+.+++++.++.. |....+.+++|+|||++|++|+.
T Consensus 268 ~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 268 KTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEECSSSSEEEEECT
T ss_pred CCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEECCCCCEEEEEEC
Confidence 344 478899999999999999999999874 43333556899999999999999
Q ss_pred CCcEEEEEc
Q psy15157 307 DSLVKLWEL 315 (344)
Q Consensus 307 dg~i~vwd~ 315 (344)
|++|+|||+
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 999999996
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-27 Score=203.19 Aligned_cols=206 Identities=21% Similarity=0.312 Sum_probs=172.2
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.....+.+|.+.|++++| +++++|++|+.||.|++||+.+ ......+..|...|.+++|+|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~------------------~~~~~~~~~~~~~v~~~~~~~ 69 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD------------------QWLGTVVYTGQGFLNSVCYDS 69 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS------------------SEEEEEEEECSSCEEEEEEET
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC------------------CEEEEEeecCCccEEEEEECC
Confidence 345678999999999999 9999999999999999999853 455677788999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcccc-ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRK-AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
++.+|++|+.||.|++|++....... ......|...|.+++| +++++++++.++.+++|
T Consensus 70 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~ 147 (313)
T 3odt_A 70 EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWD 147 (313)
T ss_dssp TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEE
T ss_pred CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeE
Confidence 99999999999999999997754222 2333457888999999 57899999999999998
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+++.++++++.||.|++|| ..+....+...+. ..+.+++|+|++. +++++.||.|++||+++++++..+.+
T Consensus 148 ~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~-~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 148 AKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHN-DVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCS-SCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCc-ccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc
Confidence 23899999999999999999 4556666654344 5799999999998 99999999999999999999999998
Q ss_pred CCCcCceeeeeeeccC
Q psy15157 327 AGSMGQQFELTLTVDA 342 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (344)
|.... ..+.+++++
T Consensus 224 ~~~~i--~~~~~~~~~ 237 (313)
T 3odt_A 224 HESFV--YCIKLLPNG 237 (313)
T ss_dssp CSSCE--EEEEECTTS
T ss_pred CCceE--EEEEEecCC
Confidence 87654 444455543
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-28 Score=222.79 Aligned_cols=194 Identities=10% Similarity=0.083 Sum_probs=157.8
Q ss_pred EEecCCCceEEEEECCC------CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 114 YVTSHKSPCRAGAFSID------GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~------~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
.+.+|.+.|++++|+|+ +.+||+|+.||+|+|||+.+....... ......+...+.+|...|++++|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~-------~~~~~~p~~~l~~h~~~v~sv~~ 274 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV-------FKMCEKPSLTLSLADSLITTFDF 274 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE-------EECCCSCSEEECCTTTCEEEEEE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc-------ceeecCceEEEEcCCCCEEEEEe
Confidence 35678899999999996 579999999999999999753211000 00011234567899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEE--EEecCC-CEEEEEeCCCEEEEE--------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCL--SFHPCG-DYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~~~~i~~~-------------- 250 (344)
++++ .|++|+.||+|++||++++... ......|...|+++ +|+|+| .+|++|+.|+.+++|
T Consensus 275 s~~~-~lasgs~DgtV~lWD~~~~~~~-~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~ 352 (524)
T 2j04_B 275 LSPT-TVVCGFKNGFVAEFDLTDPEVP-SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR 352 (524)
T ss_dssp SSSS-EEEEEETTSEEEEEETTBCSSC-SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE
T ss_pred cCCC-eEEEEeCCCEEEEEECCCCCCc-eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc
Confidence 9864 8999999999999999876432 22345688899999 578887 899999999999999
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+|++..+++++.|++|++||++++.++..+.. |. ..|++++|+|+|++|++|+.||+|++||+..+
T Consensus 353 ~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~-~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 353 FRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RE-TTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-CS-SCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred cccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-CC-CceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 56788899999999999999999988777764 54 47999999999999999999999999998653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=220.68 Aligned_cols=187 Identities=24% Similarity=0.324 Sum_probs=154.9
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|++++|++|+.|+.|++||+.+ ...+..+.+|...|.+++|+|++
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~------------------~~~~~~~~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD------------------GSNPRTLIGHRATVTDIAIIDRG 193 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCCCEEEECCSSCEEEEEEETTT
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC------------------CcCceEEcCCCCcEEEEEEcCCC
Confidence 344569999999999999999999999999999999964 33456778999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeee-ccc---------------------cceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTI-QES---------------------TFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~---------------------~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
.+|++++.||.|++||+++++....+... .+. ..+.+++|+|+++++++|+.++.+++
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 273 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV 273 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence 99999999999999999988655444321 122 33444556789999999999999999
Q ss_pred E------------------------cCCCC-EEEEEeCCCcEEEEeCCCCeE-EeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 250 Y------------------------SSDGR-IYCSGSKDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 250 ~------------------------~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
| +|++. ++++|+.||.|++||+++++. +..+..++ ...|.++.| +++++|++
T Consensus 274 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~~l~s 351 (420)
T 3vl1_A 274 HNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE-GTPINNVYF-AAGALFVS 351 (420)
T ss_dssp EETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST-TSCEEEEEE-ETTEEEEE
T ss_pred EECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC-CCCceEEEe-CCCCEEEE
Confidence 8 67788 999999999999999998754 55665434 457888855 57889999
Q ss_pred EeCCCcEEEEEcCCC
Q psy15157 304 SGKDSLVKLWELSSA 318 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~ 318 (344)
++.||.|++||+...
T Consensus 352 ~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 352 SGFDTSIKLDIISDP 366 (420)
T ss_dssp ETTTEEEEEEEECCT
T ss_pred ecCCccEEEEeccCC
Confidence 999999999999874
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-28 Score=213.97 Aligned_cols=200 Identities=16% Similarity=0.231 Sum_probs=167.4
Q ss_pred ceeEEecCCCceEEEEECCC----C---CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-----
Q psy15157 111 ETAYVTSHKSPCRAGAFSID----G---QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH----- 178 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~----~---~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----- 178 (344)
....+.+|...|++++|+|+ + ++|++++.||.|++||+.+... ........+..|
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~-------------~~~~~~~~~~~~~~~~~ 120 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE-------------TKKVIFEKLDLLDSDMK 120 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTT-------------TCCEEEEEECCSCTTGG
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcc-------------cccccceeecccccccC
Confidence 45667899999999999999 9 9999999999999999964211 111226677888
Q ss_pred cCCeEEEEEc----CCCCE-EEEEeCCCcEEEEEcCC------Ccccc-----ceee-----eccccceEEEEEecCCCE
Q psy15157 179 IEEVTCLEFH----PSAPI-LASGSKDKTVKMFDYSK------SSVRK-----AHKT-----IQESTFVRCLSFHPCGDY 237 (344)
Q Consensus 179 ~~~v~~~~~~----~~~~~-l~s~~~dg~i~iwd~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~ 237 (344)
...|.+++|+ |++.. |++++.||.|++||+.+ ++... .+.. ..+...+.+++|+|++ +
T Consensus 121 ~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 199 (397)
T 1sq9_A 121 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L 199 (397)
T ss_dssp GSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E
T ss_pred CCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e
Confidence 5999999999 99999 99999999999999988 55443 3322 3467789999999999 9
Q ss_pred EEEEeCCCEEEEE-----------------------------cCCCCEEEEEeCC---CcEEEEeCCCCeEEeeeccc--
Q psy15157 238 MVVGTDHFVLRLY-----------------------------SSDGRIYCSGSKD---GDIKIWDGVSSKCVATFSKA-- 283 (344)
Q Consensus 238 l~~~~~~~~i~~~-----------------------------~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~-- 283 (344)
+++++.++.+++| +|++.+|++++.| +.|++||+++++.+..+...
T Consensus 200 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 9999999999988 2367889999999 99999999999988888641
Q ss_pred ----------CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 284 ----------HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 284 ----------~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
|. ..|.+++|+|++++|++++.||.|++||+++++++..+.
T Consensus 280 ~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 280 SSQASLGEFAHS-SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp ------CCBSBS-SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccccccccccC-CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 44 479999999999999999999999999999999999999
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-28 Score=209.48 Aligned_cols=198 Identities=14% Similarity=0.164 Sum_probs=167.5
Q ss_pred eeEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEc-CCccccccCCCCCCcCCCCCCceEEEecC--CcCCeEEEEE
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDV-DRMLAKSSMESSEPQNDQQGHPVIRTLYD--HIEEVTCLEF 187 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~ 187 (344)
...+.+|...|++++|+|+++ +|++|+.||.|++||+ .+. ....+.+ |...|.+++|
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-------------------~~~~~~~~~~~~~v~~l~~ 109 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP-------------------SFQALTNNEANLGICRICK 109 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS-------------------SEEECBSCCCCSCEEEEEE
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC-------------------ceEeccccCCCCceEEEEe
Confidence 344568999999999999999 9999999999999998 642 2366778 9999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCC---------CccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSK---------SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------- 250 (344)
+| +..|++++.||.|++||+++ ++....+ .+...+.+++|+|++ +++++.++.+++|
T Consensus 110 ~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 110 YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT---KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS---SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC
T ss_pred CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE---eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccc
Confidence 99 99999999999999999987 5443333 367889999999887 9999999999988
Q ss_pred ------------------cC-CCCEEEEEeCCCcEEEEeCCCC------eEEeeecccCC-------CccEEEEEEccCC
Q psy15157 251 ------------------SS-DGRIYCSGSKDGDIKIWDGVSS------KCVATFSKAHD-------GAEISSLTFTRNG 298 (344)
Q Consensus 251 ------------------~~-~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~-------~~~v~~i~~~~~~ 298 (344)
+| ++.++++++.||.|++||+... +....+..+.. ...|.+++|+|++
T Consensus 184 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 263 (342)
T 1yfq_A 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH 263 (342)
T ss_dssp CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT
T ss_pred cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC
Confidence 56 8899999999999999999876 55566653321 2379999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCeeEEEeecC-CCcCcee
Q psy15157 299 KYLLSSGKDSLVKLWELSSARCLIAYTGA-GSMGQQF 334 (344)
Q Consensus 299 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~ 334 (344)
++|++++.||.|++||+.+++++..+.+| ......+
T Consensus 264 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~ 300 (342)
T 1yfq_A 264 KFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300 (342)
T ss_dssp CCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEE
T ss_pred CEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEe
Confidence 99999999999999999999999999987 6554433
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-28 Score=210.89 Aligned_cols=187 Identities=18% Similarity=0.315 Sum_probs=155.6
Q ss_pred ceeEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEE
Q psy15157 111 ETAYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLE 186 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~ 186 (344)
....+.+|...|++++|+| ++++|++|+.||.|++||+.+ ......+ .+|...|.+++
T Consensus 107 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 107 CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT------------------DTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT------------------TEEEEEECSTTSCSSCEEEEE
T ss_pred EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec------------------CeEEEEecccccccCceeEEE
Confidence 3456789999999999999 999999999999999999964 3445555 68999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCcccccee--------------------------eeccccceEEEEEecCCCEEEE
Q psy15157 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHK--------------------------TIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 187 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
|+|++.+|++++.||.|++||+++++....+. ...+...|.+++|+ ++++++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 246 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS 246 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence 99999999999999999999998865432221 11267789999998 789999
Q ss_pred EeCCCEEEEE-------------------------------------cCC--CCEEEEEeCCCcEEEEeCCCCeE----E
Q psy15157 241 GTDHFVLRLY-------------------------------------SSD--GRIYCSGSKDGDIKIWDGVSSKC----V 277 (344)
Q Consensus 241 ~~~~~~i~~~-------------------------------------~~~--~~~l~~~~~dg~i~iwd~~~~~~----~ 277 (344)
++.++.+++| +++ +++|++|+.||.|++||+.+++. .
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 326 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC 326 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc
Confidence 9999999999 244 89999999999999999998753 3
Q ss_pred eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..+..+.....|++++|+|++++|++++.||.|++||+.+
T Consensus 327 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 327 TTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred eEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 3454332235799999999999999999999999999853
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=212.28 Aligned_cols=204 Identities=11% Similarity=0.126 Sum_probs=165.4
Q ss_pred ecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEEEcCCC
Q psy15157 116 TSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLEFHPSA 191 (344)
Q Consensus 116 ~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~ 191 (344)
.+|.+.|++++|+| ++++|++++.|+.|++||+.+ .....+ ..|...|.+++|+|++
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-------------------~~~~~~~~~~~~~~~v~~~~~~~~~ 175 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-------------------SVIQVFAKTDSWDYWYCCVDVSVSR 175 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-------------------CEEEEEECCCCSSCCEEEEEEETTT
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-------------------CceEEEeccCCCCCCeEEEEECCCC
Confidence 47999999999999 789999999999999999963 223333 3455889999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE--------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~-------------------- 250 (344)
.+|++|+.||.|++||++ ++.. .....|...|.+++|+|++. ++++++.|+.+++|
T Consensus 176 ~~l~~~~~d~~i~i~d~~-~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 252 (383)
T 3ei3_B 176 QMLATGDSTGRLLLLGLD-GHEI--FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP 252 (383)
T ss_dssp TEEEEEETTSEEEEEETT-SCEE--EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC
T ss_pred CEEEEECCCCCEEEEECC-CCEE--EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc
Confidence 999999999999999995 3332 33456788999999999999 99999999999998
Q ss_pred ------cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccC---------------CCccEEEEEEccCCCEEEEEeCCC
Q psy15157 251 ------SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH---------------DGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 251 ------~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
+| ++.++++++.|+.|++||+++++....+..+. ....+..++|+|++++ +|+.||
T Consensus 253 v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~ 330 (383)
T 3ei3_B 253 VNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKR 330 (383)
T ss_dssp EEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCC
T ss_pred eEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCC
Confidence 68 99999999999999999999887655554211 0123555777777776 788999
Q ss_pred cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 309 LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 309 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.|++||+.+++++..+.++...+....+.+++++.
T Consensus 331 ~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~ 365 (383)
T 3ei3_B 331 TIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGD 365 (383)
T ss_dssp CEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSS
T ss_pred eEEEEecCCCceeeeecCCCCCceEEEEEEecCcc
Confidence 99999999999999999866554455556666654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-27 Score=229.21 Aligned_cols=208 Identities=23% Similarity=0.378 Sum_probs=179.6
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|++|+.||.|++||+.+ +..+..+.+|.+.|++++|+|+
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~------------------~~~~~~~~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT------------------GEKVVDFEAHPDYIRSIAVHPT 108 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT------------------CCEEEEEECCSSCEEEEEECSS
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEEecCCCCEEEEEEeCC
Confidence 4556789999999999999999999999999999999853 4567788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~------------------- 250 (344)
+++|++++.||.|++||+.++... ......|...|.+++|+| ++..+++++.++.+++|
T Consensus 109 ~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v 187 (814)
T 3mkq_A 109 KPYVLSGSDDLTVKLWNWENNWAL-EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (814)
T ss_dssp SSEEEEEETTSEEEEEEGGGTSEE-EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC
T ss_pred CCEEEEEcCCCEEEEEECCCCceE-EEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE
Confidence 999999999999999999876322 223345778899999999 89999999999999999
Q ss_pred -----cC--CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q psy15157 251 -----SS--DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 251 -----~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 323 (344)
+| ++.++++++.||.|++||..+++.+..+.. |. ..|.+++|+|++++|++++.||.|++||+.+++.+..
T Consensus 188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 265 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-HM-SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (814)
T ss_dssp CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-CS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-CC-CCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 34 899999999999999999999999888863 43 4699999999999999999999999999999999999
Q ss_pred eecCCCcCceeeeeeecc
Q psy15157 324 YTGAGSMGQQFELTLTVD 341 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~ 341 (344)
+..+... ...+.++++
T Consensus 266 ~~~~~~~--v~~~~~~~~ 281 (814)
T 3mkq_A 266 LNVGLER--SWCIATHPT 281 (814)
T ss_dssp ECCSSSS--EEEEEECTT
T ss_pred eecCCCc--EEEEEEccC
Confidence 9887543 334444444
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-27 Score=230.59 Aligned_cols=186 Identities=14% Similarity=0.171 Sum_probs=158.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
...+|.+.|++++|+|++++||+|+.||+|+||+..+ ...... ..|...|.+++|+| +++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~------------------~~~~~~-~~~~~~V~~l~fsp-g~~ 71 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ------------------VEVVIK-LEDRSAIKEMRFVK-GIY 71 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT------------------CEEEEE-CSSCCCEEEEEEET-TTE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC------------------cEEEEE-cCCCCCEEEEEEcC-CCE
Confidence 3469999999999999999999999999999999753 222222 35788999999999 889
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC---------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--------------------- 252 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~--------------------- 252 (344)
|++++.|++|++||+.+++....+ .+...|++++|+|+++++++|+.|+.|++|+.
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~---~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTV---FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEE---ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred EEEEECcCeEEEEECCCCcEEEEE---cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 999999999999999988655444 35678999999999999999999999999953
Q ss_pred --------------CCCEEEEEeCCCcEEEEeCCCCeEEeeeccc----------------CCCccEEEEEEccCCCEEE
Q psy15157 253 --------------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKA----------------HDGAEISSLTFTRNGKYLL 302 (344)
Q Consensus 253 --------------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------------~~~~~v~~i~~~~~~~~l~ 302 (344)
++..+++|+.||.| +||+++++++..+..+ ++...|++++|+|+|++|+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 23578899999999 9999999988777532 0124699999999999999
Q ss_pred EEeCCCcEEEEEcCCCeeEEE
Q psy15157 303 SSGKDSLVKLWELSSARCLIA 323 (344)
Q Consensus 303 s~~~dg~i~vwd~~~~~~~~~ 323 (344)
+|+.||.|++||+++++++..
T Consensus 228 sgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 228 TIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp EEETTCCEEEEETTTCCEEEE
T ss_pred EEECCCeEEEEECCCCcEEEE
Confidence 999999999999999988764
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-27 Score=205.94 Aligned_cols=209 Identities=9% Similarity=0.012 Sum_probs=170.9
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-E
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-I 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 193 (344)
..+|.+.|++++|+|++++|++|+.||.|++|++.+. ........+.+|...|.+++|+|+++ +
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 71 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ---------------AKNVDLLQSLRYKHPLLCCNFIDNTDLQ 71 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETT---------------TTEEEEEEEEECSSCEEEEEEEESSSEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCC---------------CccccceeeeecCCceEEEEECCCCCcE
Confidence 3589999999999999999999999999999999642 11123455668999999999999999 9
Q ss_pred EEEEeCCCcEEEEEc-CCCccccceeeec--cccceEEEEEecCCCEEEEEeCCCEEEEEcCC-----------------
Q psy15157 194 LASGSKDKTVKMFDY-SKSSVRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD----------------- 253 (344)
Q Consensus 194 l~s~~~dg~i~iwd~-~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~----------------- 253 (344)
|++|+.||.|++||+ .+++. ..... |...|.+++|+| +.++++++.++.+++|+..
T Consensus 72 l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 147 (342)
T 1yfq_A 72 IYVGTVQGEILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT 147 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS
T ss_pred EEEEcCCCeEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE
Confidence 999999999999999 77654 33345 788999999999 9999999999999999422
Q ss_pred ------------CCEEEEEeCCCcEEEEeCCC-CeEE-eeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCC
Q psy15157 254 ------------GRIYCSGSKDGDIKIWDGVS-SKCV-ATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 254 ------------~~~l~~~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+..+++++.|+.|++||+++ +... ......+. ..+.+++|+| ++++|++++.||.|++|+++.+
T Consensus 148 ~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 148 KVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK-YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp SSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCS-SCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred eeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCC-CceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 22388999999999999998 5432 22222333 4799999999 9999999999999999999987
Q ss_pred ------eeEEEeecCCC-------cCceeeeeeeccCC
Q psy15157 319 ------RCLIAYTGAGS-------MGQQFELTLTVDAD 343 (344)
Q Consensus 319 ------~~~~~~~~~~~-------~~~~~~~~~~~~~~ 343 (344)
+.+..+.+|.. ......+.+++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 264 (342)
T 1yfq_A 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK 264 (342)
T ss_dssp CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC
T ss_pred CcccccccceeeecccccccccccceeEEEEEEcCCCC
Confidence 88889988865 33566677777654
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-28 Score=215.32 Aligned_cols=210 Identities=18% Similarity=0.304 Sum_probs=173.0
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l 194 (344)
..|...|++++|+|++++|++|+.||.|++||+.+. .........+.+|...|.+++|+|+ +.+|
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~--------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 129 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEA--------------NNAINSMARFSNHSSSVKTVKFNAKQDNVL 129 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSST--------------TSCCCEEEECCCSSSCCCEEEECSSSTTBE
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccc--------------cccccchhhccCCccceEEEEEcCCCCCEE
Confidence 368999999999999999999999999999999631 0123467888999999999999998 8899
Q ss_pred EEEeCCCcEEEEEcCCCc------cccce-eeeccccceEEEEEecC-CCEEEEEeCCCEEEEE----------------
Q psy15157 195 ASGSKDKTVKMFDYSKSS------VRKAH-KTIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~------~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~---------------- 250 (344)
++++.||.|++||+.+++ ..... ....+...|.+++|+|+ +.++++++.++.+++|
T Consensus 130 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 209 (416)
T 2pm9_A 130 ASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP 209 (416)
T ss_dssp EEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC
T ss_pred EEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc
Confidence 999999999999998875 22111 22457788999999999 7899999999999998
Q ss_pred -------------cCCC-CEEEEEeCCC---cEEEEeCCCC-eEEeeecccCCCccEEEEEEcc-CCCEEEEEeCCCcEE
Q psy15157 251 -------------SSDG-RIYCSGSKDG---DIKIWDGVSS-KCVATFSKAHDGAEISSLTFTR-NGKYLLSSGKDSLVK 311 (344)
Q Consensus 251 -------------~~~~-~~l~~~~~dg---~i~iwd~~~~-~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~ 311 (344)
+|++ .++++++.|+ .|++||++++ ..+..+...|. ..|.+++|+| ++++|++++.||.|+
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~~~dg~v~ 288 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ-KGILSLDWCHQDEHLLLSSGRDNTVL 288 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS-SCEEEEEECSSCSSCEEEEESSSEEE
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc-CceeEEEeCCCCCCeEEEEeCCCCEE
Confidence 3444 6899999999 9999999987 45555541344 4799999999 999999999999999
Q ss_pred EEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 312 LWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 312 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
+||+++++++..+.+|..... .+.+++++
T Consensus 289 ~wd~~~~~~~~~~~~~~~~v~--~~~~s~~~ 317 (416)
T 2pm9_A 289 LWNPESAEQLSQFPARGNWCF--KTKFAPEA 317 (416)
T ss_dssp EECSSSCCEEEEEECSSSCCC--CEEECTTC
T ss_pred EeeCCCCccceeecCCCCceE--EEEECCCC
Confidence 999999999999998876544 44455543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-26 Score=205.26 Aligned_cols=201 Identities=20% Similarity=0.341 Sum_probs=166.3
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.|...|++++|+|++++|++|+.||.|++||+.+ ...+..+.+|...|.+++|+ +..|++
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~v~~~~~~--~~~l~~ 191 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES------------------QTKLRTMAGHQARVGCLSWN--RHVLSS 191 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------CCEEEEECCCSSCEEEEEEE--TTEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC------------------CeEEEEecCCCCceEEEEEC--CCEEEE
Confidence 4899999999999999999999999999999853 45677888999999999994 569999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
|+.||.|++||++.... .......|...|.+++|+|++.++++|+.|+.+++| +|+
T Consensus 192 ~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANH-QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPW 270 (401)
T ss_dssp EETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTT
T ss_pred EcCCCCEEEEecccCcc-eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCC
Confidence 99999999999985432 223345688899999999999999999999999998 564
Q ss_pred C-CEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE--EeCCCcEEEEEcCCCeeEEEe--ec
Q psy15157 254 G-RIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS--SGKDSLVKLWELSSARCLIAY--TG 326 (344)
Q Consensus 254 ~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s--~~~dg~i~vwd~~~~~~~~~~--~~ 326 (344)
+ .++++|+ .|+.|++||+.+++.+..+. .+ ..|.+++|+|++++|++ |+.||.|++||+.+++....+ .+
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~--~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~ 347 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGARVNTVD-AG--SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPA 347 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCEEEEEE-CS--SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEEC
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CC--CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecC
Confidence 4 5666655 79999999999999988885 22 46999999999999999 448999999999998766654 45
Q ss_pred CCCcCceeeeeeeccCC
Q psy15157 327 AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (344)
|.. ....+.+++++.
T Consensus 348 h~~--~v~~~~~s~dg~ 362 (401)
T 4aez_A 348 HDT--RVLYSALSPDGR 362 (401)
T ss_dssp CSS--CCCEEEECTTSS
T ss_pred CCC--CEEEEEECCCCC
Confidence 544 445556666553
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-26 Score=198.55 Aligned_cols=205 Identities=20% Similarity=0.280 Sum_probs=171.7
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+..|...|++++|+|+++++++|+.||.|++|++... ........+.+|...|.+++| +
T Consensus 51 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~~~--~ 113 (313)
T 3odt_A 51 LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT---------------SGEDPLYTLIGHQGNVCSLSF--Q 113 (313)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC---------------TTSCC-CEECCCSSCEEEEEE--E
T ss_pred EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec---------------CCCCcccchhhcccCEEEEEe--c
Confidence 34556789999999999999999999999999999998642 223456678899999999999 5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~------------------- 250 (344)
+..+++++.||.|++|| .++. ......+...+.+++|+| ++.++++++.++.+++|
T Consensus 114 ~~~l~~~~~d~~i~~~d--~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~ 189 (313)
T 3odt_A 114 DGVVISGSWDKTAKVWK--EGSL--VYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRH 189 (313)
T ss_dssp TTEEEEEETTSEEEEEE--TTEE--EEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEE
T ss_pred CCEEEEEeCCCCEEEEc--CCcE--EEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEE
Confidence 67999999999999999 3322 233445788899999998 99999999999999998
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
++++. +++++.||.|++||+++++.+..+. .|. ..|.+++|+|++ .|++++.||.|++||+++++++..+..|
T Consensus 190 ~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~-~~~-~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 190 LAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE-GHE-SFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp EEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE-CCS-SCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred EEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh-cCC-ceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc
Confidence 45666 8899999999999999999998886 344 479999999999 5899999999999999999999999988
Q ss_pred CCcCceeeeeeeccC
Q psy15157 328 GSMGQQFELTLTVDA 342 (344)
Q Consensus 328 ~~~~~~~~~~~~~~~ 342 (344)
... ...+.+++++
T Consensus 266 ~~~--i~~~~~~~~~ 278 (313)
T 3odt_A 266 AIS--IWSVDCMSNG 278 (313)
T ss_dssp SSC--EEEEEECTTS
T ss_pred Cce--EEEEEEccCC
Confidence 654 4455555554
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-27 Score=208.62 Aligned_cols=199 Identities=13% Similarity=0.130 Sum_probs=164.3
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS- 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~- 190 (344)
...+.+|.+.|++++|+| ++|++|+.||.|++||+.+... .........+.+|...|.+++|+|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~------------~~~~~~~~~~~~h~~~v~~~~~~~~~ 74 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN------------ENPKDKSYSHFVHKSGLHHVDVLQAI 74 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTT------------CCGGGGEEEEECCTTCEEEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccc------------ccCCCcceEEecCCCcEEEEEEeccc
Confidence 345679999999999998 8999999999999999974311 0113357788899999999999999
Q ss_pred ---C---CEEEEEeCCCcEEEEEcCCCcccc---ceeeecc-----ccceEEEEEe----cCCCE-EEEEeCCCEEEEE-
Q psy15157 191 ---A---PILASGSKDKTVKMFDYSKSSVRK---AHKTIQE-----STFVRCLSFH----PCGDY-MVVGTDHFVLRLY- 250 (344)
Q Consensus 191 ---~---~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~~~~i~~~- 250 (344)
+ .+|++++.||.|++||+.+++... ......+ ...|.+++|+ |++.+ +++++.++.+++|
T Consensus 75 ~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 154 (397)
T 1sq9_A 75 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 154 (397)
T ss_dssp ETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEE
T ss_pred ccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEe
Confidence 9 999999999999999998876410 1222334 4789999999 99999 9999999988887
Q ss_pred ----------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc--C---C
Q psy15157 251 ----------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA--H---D 285 (344)
Q Consensus 251 ----------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---~ 285 (344)
++++ ++++++.||.|++||+++++.+..+... | .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 233 (397)
T ss_dssp EESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred CCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccC
Confidence 2345 8899999999999999999998888640 3 3
Q ss_pred CccEEEEEEccCCCEEEEEeCC---CcEEEEEcCCCeeEEEeec
Q psy15157 286 GAEISSLTFTRNGKYLLSSGKD---SLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 286 ~~~v~~i~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~ 326 (344)
..|.+++|+|++++|++++.| |.|++||+++++.+..+.+
T Consensus 234 -~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 234 -NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp -CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred -CccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 479999999999999999999 9999999999999999988
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-26 Score=210.70 Aligned_cols=206 Identities=13% Similarity=0.111 Sum_probs=168.3
Q ss_pred EecCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec--CCcCCeEEEEEcCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY--DHIEEVTCLEFHPSA 191 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~ 191 (344)
..+|.+.|++++|+|++++| ++|+.||.|+|||+.. .....+..+. .|...|++++|+|++
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~----------------~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDK----------------TSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECS----------------SSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcC----------------CCCceeeeeecccCCCCceEEEEcCCC
Confidence 35788999999999999996 8999999999999961 0233444554 577899999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCcccc--ceeeeccccceEEEEEecC---CCEEEEEeCCCEEEEE----------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPC---GDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~~---------------- 250 (344)
.+|++|+.||.|++|++.++.... ......|...|.+++|+|+ +.+|++|+.|+.|++|
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 999999999999999998876442 1133457789999999999 9999999999999998
Q ss_pred --------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc-----------------------CCCccEEEEEEccCCC
Q psy15157 251 --------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA-----------------------HDGAEISSLTFTRNGK 299 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------------------~~~~~v~~i~~~~~~~ 299 (344)
+ ++.+|++|+.|+.|++||+++++++..+... .....|.+++|+|+++
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 5 7899999999999999999999988776521 1123589999999999
Q ss_pred EEEEEe-CCCcEEEEEc--CCC---eeEEEeecCCCcCceeeeeeec
Q psy15157 300 YLLSSG-KDSLVKLWEL--SSA---RCLIAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 300 ~l~s~~-~dg~i~vwd~--~~~---~~~~~~~~~~~~~~~~~~~~~~ 340 (344)
+|++++ .|+.|++|++ .++ +.+..+.++ +....+.+++
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~---~~v~~~~~~~ 364 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP---YNVISLSAHN 364 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS---SCEEEEEEET
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC---CceEEEEecC
Confidence 999998 8999999999 666 777778876 3345555554
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-26 Score=201.31 Aligned_cols=208 Identities=15% Similarity=0.225 Sum_probs=175.9
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|++++|++++.||.|++||+.+ ...+..+. |...|.+++|+|+
T Consensus 66 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~------------------~~~~~~~~-~~~~v~~~~~~~~ 126 (369)
T 3zwl_B 66 RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN------------------GQCVATWK-SPVPVKRVEFSPC 126 (369)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT------------------CCEEEEEE-CSSCEEEEEECTT
T ss_pred hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEee-cCCCeEEEEEccC
Confidence 4556789999999999999999999999999999999964 33445555 8889999999999
Q ss_pred CCEEEEEeCC-----CcEEEEEcCCCcccccee---------eecccc--ceEEEEEecCCCEEEEEeCCCEEEEE----
Q psy15157 191 APILASGSKD-----KTVKMFDYSKSSVRKAHK---------TIQEST--FVRCLSFHPCGDYMVVGTDHFVLRLY---- 250 (344)
Q Consensus 191 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~---------~~~~~~--~v~~~~~~~~~~~l~~~~~~~~i~~~---- 250 (344)
+.++++++.+ |.|++||+.......... ...+.. .+.+++|+|+++++++++.++.+++|
T Consensus 127 ~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 127 GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 9999999999 999999998765322221 122333 89999999999999999999999998
Q ss_pred --------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC--
Q psy15157 251 --------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-- 308 (344)
Q Consensus 251 --------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-- 308 (344)
+|++.+|++++.|+.|++||+++++.+..+. +. ..+.+++|+|+++++++++.++
T Consensus 207 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~-~~~~~~~~~~~~~~l~~~~~~~~~ 283 (369)
T 3zwl_B 207 NYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--TD-CPLNTAVITPLKEFIILGGGQEAK 283 (369)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CS-SCEEEEEECSSSSEEEEEECCC--
T ss_pred CcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--CC-CCceeEEecCCCceEEEeecCCCc
Confidence 6899999999999999999999999888886 22 4699999999999999999988
Q ss_pred ------------cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 309 ------------LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 309 ------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.+++||+.+++.+..+.+|.... ..+.+++++
T Consensus 284 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v--~~~~~s~~~ 327 (369)
T 3zwl_B 284 DVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPL--NTVAISPQG 327 (369)
T ss_dssp -----------CEEEEEETTTCCEEEEEECCSSCE--EEEEECTTS
T ss_pred eEEEEecCCCcceeEEEecCCCcchhheecccCcE--EEEEECCCC
Confidence 89999999999999999886654 445555554
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=222.46 Aligned_cols=210 Identities=12% Similarity=0.086 Sum_probs=160.8
Q ss_pred cCCCceEEEEECCCC---------CEEEE-------------------EeCCCeEEEEEcCCccccccCCCCCCcCCCCC
Q psy15157 117 SHKSPCRAGAFSIDG---------QLCAT-------------------GSVDASIKILDVDRMLAKSSMESSEPQNDQQG 168 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~---------~~l~s-------------------g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (344)
.+.+.|++++|+|++ ++||+ ++.|++|+|||+.+... .
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~--------------~ 196 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTL--------------H 196 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTC--------------C
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCC--------------C
Confidence 478899999999876 56666 45788999999864210 0
Q ss_pred CceEEEecCCcCCeEEEEEcCC------CCEEEEEeCCCcEEEEEcCCCccc---------cceeeeccccceEEEEEec
Q psy15157 169 HPVIRTLYDHIEEVTCLEFHPS------APILASGSKDKTVKMFDYSKSSVR---------KAHKTIQESTFVRCLSFHP 233 (344)
Q Consensus 169 ~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~v~~~~~~~ 233 (344)
......+.+|.+.|.+++|+|+ +.+|++|+.||+|++||+.++... .......|...|++++|++
T Consensus 197 ~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~ 276 (524)
T 2j04_B 197 CVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS 276 (524)
T ss_dssp EEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS
T ss_pred ceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC
Confidence 1123456678899999999996 569999999999999999876422 0123345778899999998
Q ss_pred CCCEEEEEeCCCEEEEE--------------------------cCCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCC
Q psy15157 234 CGDYMVVGTDHFVLRLY--------------------------SSDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286 (344)
Q Consensus 234 ~~~~l~~~~~~~~i~~~--------------------------~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 286 (344)
+ ..|++|+.|+.|++| +++| .+|++|+.|++|+|||++++++...+..+...
T Consensus 277 ~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 277 P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 6 489999999999999 3566 89999999999999999998776666533222
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..|.+++|+|+++.+++++.|++|++||++++.++.++.+|.... .++.+++++.
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V--~sva~Sp~g~ 410 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTI--TAIGVSRLHP 410 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCE--EEEECCSSCC
T ss_pred CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCce--EEEEeCCCCC
Confidence 347899999999999999999999999999999999999887654 4455566553
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-27 Score=206.85 Aligned_cols=209 Identities=18% Similarity=0.283 Sum_probs=166.2
Q ss_pred EecCCCceEEEEECCC---CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE----
Q psy15157 115 VTSHKSPCRAGAFSID---GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF---- 187 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~---~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~---- 187 (344)
..+|...|++++|+|+ +++|++|+.||.|++||+.+. ......+.+|...|.+++|
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----------------~~~~~~~~~~~~~v~~~~~~~~~ 123 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP-----------------EMPVYSVKGHKEIINAIDGIGGL 123 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSC-----------------SSCSEEECCCSSCEEEEEEESGG
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC-----------------CccEEEEEecccceEEEeecccc
Confidence 3489999999999998 699999999999999999642 1245678899999999965
Q ss_pred --cCCCCEEEEEeCCCcEEEEEcCCCc-cccceeeec--cccceEEEE----EecCCCEEEEEeCCCEEEEE--------
Q psy15157 188 --HPSAPILASGSKDKTVKMFDYSKSS-VRKAHKTIQ--ESTFVRCLS----FHPCGDYMVVGTDHFVLRLY-------- 250 (344)
Q Consensus 188 --~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~--~~~~v~~~~----~~~~~~~l~~~~~~~~i~~~-------- 250 (344)
+|++++|++|+.||.|++||+++++ ....+.... ....+.+++ |+|++.++++++.++.+++|
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 6789999999999999999999875 333332211 133788888 78899999999999999998
Q ss_pred --------------cC---CCCEEEEEeCCCcEEEEeCCCCeEEeeec----ccCCCccEEEEEEccCCC-EEEEEeCCC
Q psy15157 251 --------------SS---DGRIYCSGSKDGDIKIWDGVSSKCVATFS----KAHDGAEISSLTFTRNGK-YLLSSGKDS 308 (344)
Q Consensus 251 --------------~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~v~~i~~~~~~~-~l~s~~~dg 308 (344)
+| ++.++++++.||.|++||+++++....+. ..|. ..|.+++|+|+++ +|++++.||
T Consensus 204 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 204 WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCS-SCEEEEEEETTEEEEEEEEETTS
T ss_pred eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCc-CCEEEEEECCCCCcEEEEEeCCC
Confidence 56 89999999999999999998876554432 1343 4799999999998 899999999
Q ss_pred cEEEEEcCCC-------------------eeEEEeecCCCcCceeeeeeeccCC
Q psy15157 309 LVKLWELSSA-------------------RCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 309 ~i~vwd~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.|++||++++ +++..+.+|... ...+.++++++
T Consensus 283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--v~~~~~s~~~~ 334 (357)
T 3i2n_A 283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQP--ISSLDWSPDKR 334 (357)
T ss_dssp EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSC--EEEEEECSSST
T ss_pred cEEEeecCCCcccccccCCCCccccccccceeeccccCCCC--eeEEEEcCCCC
Confidence 9999999864 467777777554 44555566553
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-27 Score=205.51 Aligned_cols=207 Identities=11% Similarity=0.206 Sum_probs=164.5
Q ss_pred ceeEEecCCCceEEEEECCCCC-EEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQ-LCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~-~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 186 (344)
....+.+|.+.|++++|+|++. ++++|+. ||.|+|||+.+. ........+|...|.+++
T Consensus 10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~-----------------~~~~~~~~~~~~~v~~~~ 72 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG-----------------DLKLLREIEKAKPIKCGT 72 (357)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS-----------------SEEEEEEEEESSCEEEEE
T ss_pred hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC-----------------cccceeeecccCcEEEEE
Confidence 3445678999999999999986 5556666 999999999642 111223347899999999
Q ss_pred EcCC---CCEEEEEeCCCcEEEEEcCCCc-cccceeeeccccceEEEEE------ecCCCEEEEEeCCCEEEEE------
Q psy15157 187 FHPS---APILASGSKDKTVKMFDYSKSS-VRKAHKTIQESTFVRCLSF------HPCGDYMVVGTDHFVLRLY------ 250 (344)
Q Consensus 187 ~~~~---~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~~~~i~~~------ 250 (344)
|+|+ +.+|++|+.||.|++||+.+++ .. .....|...|.++.| +|+++++++++.++.+++|
T Consensus 73 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 73 FGATSLQQRYLATGDFGGNLHIWNLEAPEMPV--YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp CTTCCTTTCCEEEEETTSCEEEECTTSCSSCS--EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred EcCCCCCCceEEEecCCCeEEEEeCCCCCccE--EEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 9998 6899999999999999999876 33 333468888999955 6789999999999999999
Q ss_pred --------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc---CCCEE
Q psy15157 251 --------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR---NGKYL 301 (344)
Q Consensus 251 --------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~---~~~~l 301 (344)
++++.++++++.||.|++||+++++..... .+. ..|.+++|+| ++.+|
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~-~~v~~~~~~~~~~~~~~l 227 (357)
T 3i2n_A 151 DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--NIK-NGVCSLEFDRKDISMNKL 227 (357)
T ss_dssp SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--ECS-SCEEEEEESCSSSSCCEE
T ss_pred CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--CCC-CceEEEEcCCCCCCCCEE
Confidence 268899999999999999999999876553 333 4699999999 99999
Q ss_pred EEEeCCCcEEEEEcCCCeeEEEee-----cCCCcCceeeeeeecc
Q psy15157 302 LSSGKDSLVKLWELSSARCLIAYT-----GAGSMGQQFELTLTVD 341 (344)
Q Consensus 302 ~s~~~dg~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 341 (344)
++++.||.|++||+++++.+..+. +|... ...+.++++
T Consensus 228 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~ 270 (357)
T 3i2n_A 228 VATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST--VWQVRHLPQ 270 (357)
T ss_dssp EEEESTTEEEEEEEEEEETTTEEEEEEEECCSSC--EEEEEEETT
T ss_pred EEECCCCeEEEEeCcCCCcccceeeeccCCCcCC--EEEEEECCC
Confidence 999999999999999988766665 66544 344445544
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=215.01 Aligned_cols=201 Identities=16% Similarity=0.207 Sum_probs=163.1
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC---ccccccCCCCCCcCCCCCCceEEEec--C--CcCCeEEEE--E
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR---MLAKSSMESSEPQNDQQGHPVIRTLY--D--HIEEVTCLE--F 187 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~--h~~~v~~~~--~ 187 (344)
+|.+.|++++|+|++++|++|+.||+|++||++. +..... .....+..+. . +...+.++. +
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKF----------LNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEE----------EEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeec----------cccceeEEEEccCcccccCceEEEEEE
Confidence 6999999999999999999999999999999952 111000 0001122221 2 566788887 6
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------
Q psy15157 188 HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 188 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------- 250 (344)
++++.+|++|+.||.|++||+++++....+....|...|++++|+|++.++++|+.|+.+++|
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 688999999999999999999998766555443377899999999999999999999999999
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC------------------------CCccEEEEEEc
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH------------------------DGAEISSLTFT 295 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------------~~~~v~~i~~~ 295 (344)
++++.++++|+.||.|++||+++++++..+..+. +...|++++|+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 3567799999999999999999999887765321 23468999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 296 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
++++|++|+.||.|++||+.+++++..+.+|.
T Consensus 339 -~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 339 -NDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp -TTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred -CceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 78999999999999999999999999998864
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-26 Score=234.13 Aligned_cols=209 Identities=23% Similarity=0.378 Sum_probs=177.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++|+|+|+++++|+.||+|++||+.+ ...+..+.+|.+.|.+++|+|+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~------------------~~~~~~~~~h~~~v~~~~~s~~ 668 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET------------------GEKLLDIKAHEDEVLCCAFSSD 668 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------CCEEEEECCCSSCEEEEEECTT
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------CCEEEEeccCCCCEEEEEEecC
Confidence 3456789999999999999999999999999999999954 4567788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~------------------ 250 (344)
+++|++|+.||.|++||+.+++....+ ..|...|.+++|+| ++.++++|+.|+.+++|
T Consensus 669 ~~~l~s~~~d~~v~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v 746 (1249)
T 3sfz_A 669 DSYIATCSADKKVKIWDSATGKLVHTY--DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV 746 (1249)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEE--cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE
Confidence 999999999999999999998665443 46788899999999 55688999999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeec--------------------------------------------
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-------------------------------------------- 281 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------------------------------------- 281 (344)
+|++.++++++.||.|++||+.+++....+.
T Consensus 747 ~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~ 826 (1249)
T 3sfz_A 747 NHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDI 826 (1249)
T ss_dssp EEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEET
T ss_pred EEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEe
Confidence 6889999999999999999988775543321
Q ss_pred ----------ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 282 ----------KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 282 ----------~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
..|. ..|.+++|+|+++++++++.||.|++||+.++..+..+.+|..... .+.+++++
T Consensus 827 ~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~--~v~~spdg 894 (1249)
T 3sfz_A 827 HTSGLLAEIHTGHH-STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVH--GVMFSPDG 894 (1249)
T ss_dssp TTCCEEEEEECSSS-SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEE--EEEECTTS
T ss_pred cCCCceeEEcCCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceE--EEEECCCC
Confidence 1232 4689999999999999999999999999999999999998876544 44444443
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-27 Score=205.58 Aligned_cols=188 Identities=16% Similarity=0.239 Sum_probs=160.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|...|++++|+|++++|++++.||.|++||+.+.. ......+..|...|.+++|+|+
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----------------~~~~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT----------------WKPTLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE----------------EEEEEECCCCSSCEEEEEECTT
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe----------------eeeeEEeecCCCceeEEEECCC
Confidence 455678999999999999999999999999999999996421 1223445789999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcccccee--eeccccceEEEEEecCCCEEEEEeCCCEEEEEc-----------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHK--TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS----------------- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~----------------- 251 (344)
+++|++++.||.|++||++.+....... ...|...|.+++|+|++.++++++.++.+++|+
T Consensus 108 ~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 187 (372)
T 1k8k_C 108 EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS 187 (372)
T ss_dssp SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBS
T ss_pred CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccccccccc
Confidence 9999999999999999998875321111 234678899999999999999999999998884
Q ss_pred ------------------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 252 ------------------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 252 ------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
|++.++++++.|+.|++||+++++.+..+.. +. ..|.+++|+|++++|++| .|
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~l~~~-~d 264 (372)
T 1k8k_C 188 KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS-ET-LPLLAVTFITESSLVAAG-HD 264 (372)
T ss_dssp CCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-SS-CCEEEEEEEETTEEEEEE-TT
T ss_pred ccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc-CC-CCeEEEEEecCCCEEEEE-eC
Confidence 4677899999999999999999999888873 43 469999999999988877 89
Q ss_pred CcEEEEEcCC
Q psy15157 308 SLVKLWELSS 317 (344)
Q Consensus 308 g~i~vwd~~~ 317 (344)
+.|++|++++
T Consensus 265 ~~i~i~~~~~ 274 (372)
T 1k8k_C 265 CFPVLFTYDS 274 (372)
T ss_dssp SSCEEEEEET
T ss_pred CeEEEEEccC
Confidence 9999999988
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-27 Score=211.08 Aligned_cols=210 Identities=10% Similarity=0.136 Sum_probs=158.0
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+.+|.+.|++++|+| ++++|+||+.||+|++||+++.. .........+...+.+++|+|++.
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 222 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI----------------LRVFASSDTINIWFCSLDVSASSR 222 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE----------------EEEEECCSSCSCCCCCEEEETTTT
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc----------------eeEEeccCCCCccEEEEEECCCCC
Confidence 4568999999999998 78999999999999999986321 111122233455688999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE---------------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~--------------------- 250 (344)
+|++|+.||.|++||++... . .....|...|.+++|+|++. ++++|+.|+.|++|
T Consensus 223 ~l~~g~~dg~i~~wd~~~~~-~--~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v 299 (435)
T 4e54_B 223 MVVTGDNVGNVILLNMDGKE-L--WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPV 299 (435)
T ss_dssp EEEEECSSSBEEEEESSSCB-C--CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCE
T ss_pred EEEEEeCCCcEeeeccCcce-e--EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccc
Confidence 99999999999999997543 2 33356788999999999876 67789999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC----CccEEEEEEccCCCEEEEEe------------CCCc
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD----GAEISSLTFTRNGKYLLSSG------------KDSL 309 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~l~s~~------------~dg~ 309 (344)
+|+|.+|++++.||.|++||+.+++....+..+.. ...+..+.|+|++.++++++ +++.
T Consensus 300 ~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 379 (435)
T 4e54_B 300 NAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRT 379 (435)
T ss_dssp EECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCC
T ss_pred cceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCE
Confidence 68999999999999999999999887666542211 01233456777777666654 3467
Q ss_pred EEEEEcCCCeeEEEeecC-CCcCceeeeeeeccCC
Q psy15157 310 VKLWELSSARCLIAYTGA-GSMGQQFELTLTVDAD 343 (344)
Q Consensus 310 i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 343 (344)
|++||..+++++..+.++ ...... ...|++++.
T Consensus 380 i~iwd~~~g~~~~~l~~~~~~~v~s-~~~fspdg~ 413 (435)
T 4e54_B 380 IDVFDGNSGKMMCQLYDPESSGISS-LNEFNPMGD 413 (435)
T ss_dssp EEEECSSSCCEEEEECCSSCCCCCC-EEEECTTSS
T ss_pred EEEEECCCCcEEEEEeCCCCCcEEE-EEEECCCCC
Confidence 999999999999887644 333222 223555554
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-26 Score=218.04 Aligned_cols=204 Identities=15% Similarity=0.163 Sum_probs=170.6
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC-eEEEEEcC--CCC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE-VTCLEFHP--SAP 192 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~--~~~ 192 (344)
..|.+.|++++|+|+|++|++++ ++.|+|||+.++. ........+.+|... |++++|+| +++
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~--------------~~~~~~~~~~~h~~~~v~~~~~sp~~~~~ 79 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGD--------------SKVPPVVQFTGHGSSVVTTVKFSPIKGSQ 79 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSC--------------CSSCSEEEECTTTTSCEEEEEECSSTTCC
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCC--------------CccccceEEecCCCceEEEEEECcCCCCC
Confidence 36889999999999999999998 8899999986310 011467888999999 99999999 999
Q ss_pred EEEEEeCCCcEEEEEcCCC------ccccceeeeccccceEEEEEecCCCEEEEEeCC----CEEEEE------------
Q psy15157 193 ILASGSKDKTVKMFDYSKS------SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----FVLRLY------------ 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~~------------ 250 (344)
+|++|+.||.|++||+.++ ..........+...|.+++|+|+++++++++.+ +.+.+|
T Consensus 80 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 159 (615)
T 1pgu_A 80 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGH 159 (615)
T ss_dssp EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSC
T ss_pred EEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecC
Confidence 9999999999999999755 222333444578889999999999999999987 577665
Q ss_pred ---------cCCCC-EEEEEeCCCcEEEEeCCCCeEEeeecccCCCc---cEEEEEEccC-CCEEEEEeCCCcEEEEEcC
Q psy15157 251 ---------SSDGR-IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA---EISSLTFTRN-GKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 ---------~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~i~~~~~-~~~l~s~~~dg~i~vwd~~ 316 (344)
+|++. .+++++.|+.|++||..+++.+..+.. |. . .|.+++|+|+ +++|++++.||.|++||++
T Consensus 160 ~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 160 SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT-HH-KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS-SS-CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc-cC-CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 66776 899999999999999999999888863 43 3 6999999999 9999999999999999999
Q ss_pred CCeeEEEe-e---cCCCcCceeee
Q psy15157 317 SARCLIAY-T---GAGSMGQQFEL 336 (344)
Q Consensus 317 ~~~~~~~~-~---~~~~~~~~~~~ 336 (344)
+++.+..+ . +|......+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~ 261 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSW 261 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEE
T ss_pred CCCEeEEecccccccCCceEEEEE
Confidence 99999999 5 66555444443
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-26 Score=205.49 Aligned_cols=218 Identities=14% Similarity=0.236 Sum_probs=163.9
Q ss_pred EecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEc----CCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 115 VTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDV----DRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
...|.+.|++++|+|+++ +||+|+.||.|++|++ .++........ ...............+|.+.|++++|+|
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 118 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTI--IAELRHPFALSASSGKTTNQVTCLAWSH 118 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEE--EEEEECCCCCC------CBCEEEEEECT
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccc--cccccccccccccccCCCCceEEEEEcC
Confidence 356779999999999999 9999999999999999 54321000000 0000000000011223788999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------- 250 (344)
++++|++|+.||.|++|| .+++.. .....|...|.+++|+|+++++++++.++.+++|
T Consensus 119 ~~~~l~~~~~dg~i~i~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWN-KTGALL--NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp TSSEEEEEETTSCEEEEE-TTSCEE--EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred CCCEEEEEeCCCeEEEEe-CCCCee--eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 999999999999999999 344333 2334578889999999999999999999888877
Q ss_pred ------------------------------------------------------------cCCCCEEEEEeCCCcEEEEe
Q psy15157 251 ------------------------------------------------------------SSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 251 ------------------------------------------------------------~~~~~~l~~~~~dg~i~iwd 270 (344)
+++++++++++.|+.|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 46778899999999999999
Q ss_pred CCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
+++++.+..+. .|. ..|.+++|+|++ +|++++.|+.|++||+++++.+..+..|.... ..+.+++++
T Consensus 276 ~~~~~~~~~~~-~~~-~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i--~~~~~s~~~ 342 (425)
T 1r5m_A 276 GGNGNSQNCFY-GHS-QSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI--FAGRISQDG 342 (425)
T ss_dssp SSSBSCSEEEC-CCS-SCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE--EEEEECTTS
T ss_pred CCCCccceEec-CCC-ccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccE--EEEEEcCCC
Confidence 99988877775 343 479999999999 99999999999999999999999999876543 444555554
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-27 Score=207.83 Aligned_cols=194 Identities=21% Similarity=0.325 Sum_probs=155.9
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|...|.+++| +++++++|+.||.|++||+.. .......+.+|.+.|.+++|+|+
T Consensus 168 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI-----------------ANHQIGTLQGHSSEVCGLAWRSD 228 (401)
T ss_dssp EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS-----------------SSCEEEEEECCSSCEEEEEECTT
T ss_pred EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc-----------------CcceeeEEcCCCCCeeEEEEcCC
Confidence 34556799999999999 578999999999999999962 24567788899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEE-EEEe--CCCEEEEE-----------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGT--DHFVLRLY----------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~--~~~~i~~~----------------- 250 (344)
+.+|++|+.||.|++||+++++... ....+...|.+++|+|++..+ ++++ .++.+++|
T Consensus 229 ~~~l~s~~~d~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v 306 (401)
T 4aez_A 229 GLQLASGGNDNVVQIWDARSSIPKF--TKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQV 306 (401)
T ss_dssp SSEEEEEETTSCEEEEETTCSSEEE--EECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCE
T ss_pred CCEEEEEeCCCeEEEccCCCCCccE--EecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 9999999999999999999875443 334577889999999977555 4544 69999998
Q ss_pred -----cCCCCEEEE--EeCCCcEEEEeCCCCeEEeeec-ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 251 -----SSDGRIYCS--GSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 251 -----~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
++++.++++ |+.||.|++||+.+++...... ..|. ..|.+++|+|++++|++++.||.|++||+.+++.+.
T Consensus 307 ~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 307 TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD-TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCS-SCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 688999999 4589999999999976655433 2343 579999999999999999999999999999998877
Q ss_pred Eeec
Q psy15157 323 AYTG 326 (344)
Q Consensus 323 ~~~~ 326 (344)
....
T Consensus 386 ~~~~ 389 (401)
T 4aez_A 386 RPIP 389 (401)
T ss_dssp ----
T ss_pred cccc
Confidence 6543
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-27 Score=206.96 Aligned_cols=159 Identities=13% Similarity=0.099 Sum_probs=128.1
Q ss_pred CcCCeEEEEEcCCCCEEEEE--eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----
Q psy15157 178 HIEEVTCLEFHPSAPILASG--SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----- 250 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----- 250 (344)
+...+.+++|+|||++++++ +.|++|+|||+.+++.... ..+...|.+++|+|+|+++++++.++.+.+|
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~---~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE---IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGS 208 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE---EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCC
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE---eCCCCceEEEEEccCCceEEeccceeEEEEEeccCc
Confidence 34458899999999987654 4789999999998765433 3466789999999999999999988777665
Q ss_pred -------------------cCCCCEEEEEeCCC----cEEEEeCCCCeEE----eeecccCCCccEEEEEEccCCCEEEE
Q psy15157 251 -------------------SSDGRIYCSGSKDG----DIKIWDGVSSKCV----ATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 251 -------------------~~~~~~l~~~~~dg----~i~iwd~~~~~~~----~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
+|++.++++++.|+ .+++||....... ..+. .|. ..|++++|+|+|++|++
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~-~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRF-KGITSMDVDMKGELAVL 286 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSC-SCEEEEEECTTSCEEEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec-CCC-CCeEeEEECCCCCceEE
Confidence 68899999999887 6889998776542 2333 343 46999999999999999
Q ss_pred EeCCCcEEEEEcCCCeeEEEe-ecCCCcCceeeeeeeccCC
Q psy15157 304 SGKDSLVKLWELSSARCLIAY-TGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 343 (344)
|+.|++|+|||+++++++..+ .+|... ..++.|++|+.
T Consensus 287 gs~D~~V~iwd~~~~~~~~~~~~gH~~~--V~~v~fSpdg~ 325 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSMSKIFKQAHSFA--ITEVTISPDST 325 (365)
T ss_dssp EETTSCEEEEETTTTEEEEEETTSSSSC--EEEEEECTTSC
T ss_pred EcCCCEEEEEECCCCcEEEEecCcccCC--EEEEEECCCCC
Confidence 999999999999999999986 577654 55667777764
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-27 Score=210.66 Aligned_cols=221 Identities=19% Similarity=0.277 Sum_probs=173.1
Q ss_pred cceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 110 YETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.......+|.+.|++++|+|+ +.+|++|+.||.|++|++.+...... ..........+.+|...|.+++|+
T Consensus 119 ~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~--------~~~~~~~~~~~~~h~~~v~~l~~~ 190 (430)
T 2xyi_A 119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE--------PSGECQPDLRLRGHQKEGYGLSWN 190 (430)
T ss_dssp EEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC--------TTCCCCCSEEEECCSSCCCCEEEC
T ss_pred eEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC--------ccccCCCcEEecCCCCCeEEEEeC
Confidence 344556789999999999997 78999999999999999964211100 011244567788999999999999
Q ss_pred CCCC-EEEEEeCCCcEEEEEcCCCcccc-----ceeeeccccceEEEEEec-CCCEEEEEeCCCEEEEE-----------
Q psy15157 189 PSAP-ILASGSKDKTVKMFDYSKSSVRK-----AHKTIQESTFVRCLSFHP-CGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 189 ~~~~-~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~i~~~----------- 250 (344)
|++. +|++|+.||.|++||+.++.... ......|...|.+++|+| ++.++++++.++.|++|
T Consensus 191 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 191 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred CCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 9988 99999999999999998743211 223346778899999999 78899999999999998
Q ss_pred ---------------cCCCC-EEEEEeCCCcEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCC-EEEEEeCCCcEEE
Q psy15157 251 ---------------SSDGR-IYCSGSKDGDIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGK-YLLSSGKDSLVKL 312 (344)
Q Consensus 251 ---------------~~~~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~v 312 (344)
+|++. ++++|+.||.|++||+++ ...+..+. .|. ..|.+++|+|+++ +|++++.||.|++
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~-~~v~~i~~sp~~~~~l~s~~~d~~i~i 348 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHK-DEIFQVQWSPHNETILASSGTDRRLHV 348 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCS-SCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCC-CCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence 56665 789999999999999998 45566665 344 4799999999985 6899999999999
Q ss_pred EEcCC--------------CeeEEEeecCCCcCceeeeeeeccC
Q psy15157 313 WELSS--------------ARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 313 wd~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
||+.. .+.+..+.+|.... ..+.+++++
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~p~~ 390 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI--SDFSWNPNE 390 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE--EEEEECSSS
T ss_pred EeCCCCccccCccccccCCcceEEEcCCCCCCc--eEEEECCCC
Confidence 99987 36677777776544 444455544
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=210.15 Aligned_cols=212 Identities=12% Similarity=0.180 Sum_probs=159.5
Q ss_pred eeEEecCC------------CceEEEEECCCC--CEEEEEeCCCeEEEEEcCCccccccCCCCCC---------cCCCCC
Q psy15157 112 TAYVTSHK------------SPCRAGAFSIDG--QLCATGSVDASIKILDVDRMLAKSSMESSEP---------QNDQQG 168 (344)
Q Consensus 112 ~~~~~~h~------------~~v~~~~~s~~~--~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~---------~~~~~~ 168 (344)
...+.+|. +.|++++|+|++ .+|++++.|++|++||+.+............ ......
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred ecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 55678998 889999999998 7999999999999999975432110000000 000000
Q ss_pred C------------ceEEE-ecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-cccce-----eeeccccceEEE
Q psy15157 169 H------------PVIRT-LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS-VRKAH-----KTIQESTFVRCL 229 (344)
Q Consensus 169 ~------------~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~-----~~~~~~~~v~~~ 229 (344)
. ..... ..+|...|.+++|+|++++|++| .||.|++||+++.. ....+ ....|...|.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 232 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAA 232 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEE
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEE
Confidence 0 11122 46899999999999999999998 79999999998432 22211 234577889999
Q ss_pred EEecCC-CEEEEEeCCCEEEEE---------------------------------------cCCCCEEEEEeCCCcEEEE
Q psy15157 230 SFHPCG-DYMVVGTDHFVLRLY---------------------------------------SSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 230 ~~~~~~-~~l~~~~~~~~i~~~---------------------------------------~~~~~~l~~~~~dg~i~iw 269 (344)
+|+|++ .++++|+.|+.|++| +|+|++|++++. +.|++|
T Consensus 233 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 233 EFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred EECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 999998 999999999999998 357889999998 999999
Q ss_pred eCCC-CeEEeeecccCCCc--------------cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 270 DGVS-SKCVATFSKAHDGA--------------EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 270 d~~~-~~~~~~~~~~~~~~--------------~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
|+++ ++++..+.. |... .+..++|+|++++|++|+.||.|++||+.+++.+ .+.++
T Consensus 312 d~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~ 382 (447)
T 3dw8_B 312 DLNMENRPVETYQV-HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEAS 382 (447)
T ss_dssp ETTCCSSCSCCEES-CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECC
T ss_pred eCCCCccccceeec-cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeec
Confidence 9997 777777753 3210 0334899999999999999999999999999876 44433
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=212.79 Aligned_cols=200 Identities=16% Similarity=0.234 Sum_probs=163.3
Q ss_pred ceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
....+.+|.+.|++++|+|+ +++|++|+.||.|++||+.+....... ........+..|...|.+++|+|
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~ 175 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN---------YTPLTPGQSMSSVDEVISLAWNQ 175 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT---------CCCBCCCCSCCSSCCCCEEEECS
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc---------ccccccccccCCCCCeeEEEeCC
Confidence 45567899999999999998 899999999999999999753210000 00111223467999999999999
Q ss_pred C-CCEEEEEeCCCcEEEEEcCCCccccceeeec----cccceEEEEEecCC-CEEEEEeCCC---EEEEE----------
Q psy15157 190 S-APILASGSKDKTVKMFDYSKSSVRKAHKTIQ----ESTFVRCLSFHPCG-DYMVVGTDHF---VLRLY---------- 250 (344)
Q Consensus 190 ~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~-~~l~~~~~~~---~i~~~---------- 250 (344)
+ +.+|++++.||.|++||+++++....+.... +...+.+++|+|++ .++++++.++ .+++|
T Consensus 176 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~ 255 (416)
T 2pm9_A 176 SLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ 255 (416)
T ss_dssp SCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB
T ss_pred CCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE
Confidence 9 6899999999999999999876544443211 16789999999997 6899999998 89888
Q ss_pred ---------------cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCC-CEEEEEeCCCcEEEE
Q psy15157 251 ---------------SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNG-KYLLSSGKDSLVKLW 313 (344)
Q Consensus 251 ---------------~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~vw 313 (344)
+| ++.++++++.|+.|++||+++++.+..+. .|. ..|.+++|+|++ .+|++++.||.|++|
T Consensus 256 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-~~~-~~v~~~~~s~~~~~~l~s~~~d~~i~iw 333 (416)
T 2pm9_A 256 TLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP-ARG-NWCFKTKFAPEAPDLFACASFDNKIEVQ 333 (416)
T ss_dssp CCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE-CSS-SCCCCEEECTTCTTEEEECCSSSEEEEE
T ss_pred EeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec-CCC-CceEEEEECCCCCCEEEEEecCCcEEEE
Confidence 56 88999999999999999999999998887 343 469999999999 899999999999999
Q ss_pred EcCCCeeE
Q psy15157 314 ELSSARCL 321 (344)
Q Consensus 314 d~~~~~~~ 321 (344)
|+.++...
T Consensus 334 ~~~~~~~~ 341 (416)
T 2pm9_A 334 TLQNLTNT 341 (416)
T ss_dssp ESCCCCCS
T ss_pred EccCCCCC
Confidence 99887643
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=213.29 Aligned_cols=208 Identities=13% Similarity=0.141 Sum_probs=146.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-------
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP------- 189 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~------- 189 (344)
.|...+....+++++.++++|+.|++|+|||..+..... ...+..+.+|.+.|++++|+|
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~-------------~~~~~~~~gH~~~v~~v~~~p~~~~~~~ 153 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIIT-------------QHVLGGKSGHHNFVNDIDIADVYSADNR 153 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEE-------------EEEECTTTSCSSCEEEEEEEEEECTTCS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccce-------------eeeecccCCCCCceEEEEEccccccccC
Confidence 344444444555667799999999999999986432111 123445789999999999998
Q ss_pred -CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE-----------------
Q psy15157 190 -SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 190 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~----------------- 250 (344)
++++|+||+.|++|+|||++++... .....+...+.+++|+|++. +|++++.|+.|++|
T Consensus 154 ~d~~~las~s~D~tv~~Wd~~~~~~~--~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 154 LAEQVIASVGDDCTLIIWRLTDEGPI--LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp EEEEEEEEEETTSEEEEEEEETTEEE--EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred CCCCEEEEEECCCeEEEEECCCCcee--eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 7889999999999999999876533 34456778899999999875 79999999999999
Q ss_pred --------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE--------
Q psy15157 251 --------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS-------- 290 (344)
Q Consensus 251 --------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-------- 290 (344)
.+++..+++++.|+.+++||+.+++....+..+. ..+.
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~--~~~~~~~~~~~~ 309 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDST--MKLGPKNLLPNV 309 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSE
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeec--CccccEEEcccc
Confidence 2789999999999999999998876655443211 1122
Q ss_pred ----------EEEEcc--CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 291 ----------SLTFTR--NGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 291 ----------~i~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
...|+| ++.++++|+.||.|++||+.+++++..+.+|... ..++.|++|+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~--V~svafspdG~ 372 (393)
T 4gq1_A 310 QGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP--IVDFCWHQDGS 372 (393)
T ss_dssp EEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC--EEEEEECTTSS
T ss_pred ccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc--EEEEEEcCCCC
Confidence 223333 3446778889999999999999999888877654 56677888775
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-26 Score=203.59 Aligned_cols=209 Identities=18% Similarity=0.221 Sum_probs=161.3
Q ss_pred cCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCC--------------------------CCCcCCCCCC
Q psy15157 117 SHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMES--------------------------SEPQNDQQGH 169 (344)
Q Consensus 117 ~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~--------------------------~~~~~~~~~~ 169 (344)
+|...|++++|+| ++++|++++.||.|++||+.+......... .....+....
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 5999999999999 788999999999999999986433211110 0011223345
Q ss_pred ceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccc-cce-------------eeeccccceEEEEEecC
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVR-KAH-------------KTIQESTFVRCLSFHPC 234 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~-~~~-------------~~~~~~~~v~~~~~~~~ 234 (344)
.....+..|...|.+++|+|++. +|++|+.||.|++||++++... ..+ ....+...|.+++|+|+
T Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 177 SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 56677889999999999999998 6999999999999999876411 111 11346788999999999
Q ss_pred CCEEEEEeCCCEEEEEcCC----------------------------CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC
Q psy15157 235 GDYMVVGTDHFVLRLYSSD----------------------------GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG 286 (344)
Q Consensus 235 ~~~l~~~~~~~~i~~~~~~----------------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 286 (344)
+.++++++.|+.+++|+.. +..+++++.|+.|++||+.+++.+..+. .|.
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~- 334 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK-GHY- 334 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC-CCS-
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec-cCC-
Confidence 9999999999999999432 3567778889999999999999998886 444
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..|.+++|+|++++|++++.||.|++||+.+++.+......
T Consensus 335 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~ 375 (408)
T 4a11_B 335 KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDET 375 (408)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEECC----------
T ss_pred CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCce
Confidence 47999999999999999999999999999999887765543
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=209.90 Aligned_cols=220 Identities=11% Similarity=0.095 Sum_probs=161.1
Q ss_pred CCCCCCccchhcccCCCceeee-cCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccc
Q psy15157 75 EPSIGLNPIQEILIGPGLDLEF-ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLA 153 (344)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~ 153 (344)
..++.++|....++.++.+-.. ..+.... .......+.+|.+.|++++|+|++++|++|+.|++|++||+.+..
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~- 88 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGN----GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG- 88 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETT----EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-------
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCC----ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-
Confidence 4455666666666665433111 1111100 002334567999999999999999999999999999999997421
Q ss_pred cccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccc-eeeec-cccceEEEEE
Q psy15157 154 KSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA-HKTIQ-ESTFVRCLSF 231 (344)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~-~~~~v~~~~~ 231 (344)
.......+.+|...|.+++|+|++++|++|+.|+.|++||+++++.... ..... |...|.+++|
T Consensus 89 --------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 89 --------------TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp --------------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred --------------ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 1235677888999999999999999999999999999999988753111 22233 7889999999
Q ss_pred ecCCCEEEEEeCCCEEEEEc----------------------------------------CCCCEEEEEeCCCcEEEEeC
Q psy15157 232 HPCGDYMVVGTDHFVLRLYS----------------------------------------SDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 232 ~~~~~~l~~~~~~~~i~~~~----------------------------------------~~~~~l~~~~~dg~i~iwd~ 271 (344)
+|+++++++++.|+.+++|+ |++++|++++.||.|++||+
T Consensus 155 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~ 234 (377)
T 3dwl_C 155 HPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYP 234 (377)
T ss_dssp CTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEE
T ss_pred cCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 99999999999999998874 57888999999999999999
Q ss_pred CCCeE----EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 272 VSSKC----VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 272 ~~~~~----~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.+++. +..+. .|. ..|.+++|+|++++|++|+.++.+ +|+..
T Consensus 235 ~~~~~~~~~~~~~~-~~~-~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 235 SAPEQPPRALITVK-LSQ-LPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CSTTSCEEECCCEE-CSS-SCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCCCcceeeEeec-CCC-CceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 99876 55665 343 469999999999999998866665 67665
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-26 Score=206.55 Aligned_cols=205 Identities=17% Similarity=0.132 Sum_probs=159.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCcc---ccccCCCCCC--------------------cC------------
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRML---AKSSMESSEP--------------------QN------------ 164 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~---~~~~~~~~~~--------------------~~------------ 164 (344)
.++.+++|+++|++|+++ .++.|++||+.++. .......... ..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 588999999999976666 57899999998765 2211110000 00
Q ss_pred ----CCCCCceEEEecCCcCCeEEEEEcCCCCEE-EEEeCCCcEEEEEcC--CCccccceeeeccccceEEEEEecCCCE
Q psy15157 165 ----DQQGHPVIRTLYDHIEEVTCLEFHPSAPIL-ASGSKDKTVKMFDYS--KSSVRKAHKTIQESTFVRCLSFHPCGDY 237 (344)
Q Consensus 165 ----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 237 (344)
............+|.+.|.+++|+|++++| ++|+.||.|++||+. +++....+....+...|.+++|+|++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 000000112234677789999999999986 899999999999998 7766555544456788999999999999
Q ss_pred EEEEeCCCEEEEE---------------------------cCC---CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCc
Q psy15157 238 MVVGTDHFVLRLY---------------------------SSD---GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287 (344)
Q Consensus 238 l~~~~~~~~i~~~---------------------------~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 287 (344)
|++|+.++.+.+| +|+ +++|++|+.|+.|++||+++++.+..+...|. .
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~-~ 242 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK-H 242 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS-S
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC-C
Confidence 9999999988876 677 88999999999999999999988877554555 4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.|.+++|+ ++++|++++.|+.|++||+++++++..+..+
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecch
Confidence 79999999 9999999999999999999999999998754
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-26 Score=203.41 Aligned_cols=201 Identities=23% Similarity=0.343 Sum_probs=159.1
Q ss_pred eEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE-----EecCCcCCeEEEE
Q psy15157 113 AYVTSHKSPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-----TLYDHIEEVTCLE 186 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~ 186 (344)
..+.+|.+.|++++|+| ++++|++|+.||.|++||+.+........ ..... ...+|...|.+++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~ 106 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYT----------CKAVCSIGRDHPDVHRYSVETVQ 106 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEE----------ECEEEEECTTCTTCCSSCEEEEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEe----------ccccccccccccccCCCcEEEEE
Confidence 34678999999999999 99999999999999999997532211100 00000 1135999999999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC---CCEEEEEeCCCEEEEE------------
Q psy15157 187 FHP-SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC---GDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 187 ~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~i~~~------------ 250 (344)
|+| ++.+|++++.||.|++||+.+++....+ .+...+.++.+++. +.++++++.++.+.+|
T Consensus 107 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 183 (408)
T 4a11_B 107 WYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF---NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ 183 (408)
T ss_dssp ECTTCTTCEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC
T ss_pred EccCCCcEEEEEeCCCeEEEeeCCCCccceec---cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec
Confidence 999 7779999999999999999987654333 35677899999985 4599999999999998
Q ss_pred -----------cCCCC-EEEEEeCCCcEEEEeCCCCe-EEeeec--------------ccCCCccEEEEEEccCCCEEEE
Q psy15157 251 -----------SSDGR-IYCSGSKDGDIKIWDGVSSK-CVATFS--------------KAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 251 -----------~~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~~--------------~~~~~~~v~~i~~~~~~~~l~s 303 (344)
+|++. ++++|+.||.|++||++++. .+..+. ..|. ..|.+++|+|++++|++
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHN-GKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCS-SCEEEEEECTTSSEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccccc-CceeEEEEcCCCCEEEE
Confidence 67777 58999999999999998765 222221 1333 57999999999999999
Q ss_pred EeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 304 SGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 304 ~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
++.||.|++||+++++....+.++
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~ 286 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGK 286 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCC
T ss_pred ecCCCeEEEEECCCCccceecccc
Confidence 999999999999998876655443
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=208.91 Aligned_cols=180 Identities=14% Similarity=0.158 Sum_probs=145.7
Q ss_pred EecCCCceEEEEECC--------CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE
Q psy15157 115 VTSHKSPCRAGAFSI--------DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~--------~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 186 (344)
+.+|.+.|++++|+| |+++||||+.|++|+|||+.+ ......+..|...|.+++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~------------------~~~~~~~~~~~~~v~~v~ 193 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD------------------EGPILAGYPLSSPGISVQ 193 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET------------------TEEEEEEEECSSCEEEEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC------------------CceeeeecCCCCCcEEEE
Confidence 579999999999997 889999999999999999853 345666778999999999
Q ss_pred EcCCCC-EEEEEeCCCcEEEEEcCCCccccce-----------------------eeeccccceEEEEEe-cCCCEEEEE
Q psy15157 187 FHPSAP-ILASGSKDKTVKMFDYSKSSVRKAH-----------------------KTIQESTFVRCLSFH-PCGDYMVVG 241 (344)
Q Consensus 187 ~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-----------------------~~~~~~~~v~~~~~~-~~~~~l~~~ 241 (344)
|+|++. +|++|+.||+|++||+++++..... ....+...+.++.|+ +++..++++
T Consensus 194 ~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~ 273 (393)
T 4gq1_A 194 FRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM 273 (393)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE
T ss_pred ECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEE
Confidence 999875 8999999999999999886532211 112345667888887 799999999
Q ss_pred eCCCEEEEEc-------------------------------------------CCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 242 TDHFVLRLYS-------------------------------------------SDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 242 ~~~~~i~~~~-------------------------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
+.|+.+++|+ .++.++++|+.||.|++||..+++...
T Consensus 274 s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~ 353 (393)
T 4gq1_A 274 CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS 353 (393)
T ss_dssp CTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE
T ss_pred eCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 9999999991 244567888999999999999998877
Q ss_pred eecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 279 TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 279 ~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
....++ .+|.+++|+|||++|++++++| +.+|.+
T Consensus 354 ~~~~~~--~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 354 IPIQLG--MPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEEECS--SCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EecCCC--CcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 765433 4799999999999999999776 555554
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-25 Score=202.72 Aligned_cols=190 Identities=21% Similarity=0.360 Sum_probs=161.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc--
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH-- 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-- 188 (344)
....+.+|.+.|++++|++++ ++++|+.||+|++||+.+ ......+.+|.+.|.+++|+
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~------------------~~~~~~~~~h~~~v~~l~~~~~ 214 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK------------------GCCTHVFEGHNSTVRCLDIVEY 214 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT------------------TEEEEEECCCSSCEEEEEEEES
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC------------------CcEEEEECCCCCccEEEEEecC
Confidence 455678999999999999988 999999999999999964 45677889999999999998
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCcccc---------------------ceeeeccccceEEEEEecCCCEEEEEeCCCEE
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRK---------------------AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~---------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i 247 (344)
+++.++++|+.||.|++||+.++.... ......|...+.++ ++++.++++|+.|+.+
T Consensus 215 ~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i 292 (464)
T 3v7d_B 215 KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTL 292 (464)
T ss_dssp SSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCE
T ss_pred CCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeE
Confidence 577899999999999999998765322 11223455666665 6789999999999999
Q ss_pred EEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 248 RLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 248 ~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
++| ++++.++++|+.||.|++||+++++++..+.. |. ..|.++.|+ +++|+++
T Consensus 293 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~-~~v~~~~~~--~~~l~s~ 368 (464)
T 3v7d_B 293 IVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG-HT-ALVGLLRLS--DKFLVSA 368 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC-CS-SCEEEEEEC--SSEEEEE
T ss_pred EEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC-CC-CcEEEEEEc--CCEEEEE
Confidence 998 68899999999999999999999999988874 44 469999997 6899999
Q ss_pred eCCCcEEEEEcCCCeeEEEee
Q psy15157 305 GKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+.||.|++||+++++....+.
T Consensus 369 s~dg~v~vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 369 AADGSIRGWDANDYSRKFSYH 389 (464)
T ss_dssp ETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCcEEEEECCCCceeeeec
Confidence 999999999999988776664
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-25 Score=210.96 Aligned_cols=237 Identities=14% Similarity=0.188 Sum_probs=184.9
Q ss_pred cCCCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCc-eEEEEECC--CCCEEEEEeCCCeEEEEEcCC
Q psy15157 74 MEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSP-CRAGAFSI--DGQLCATGSVDASIKILDVDR 150 (344)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~ 150 (344)
...++.++|....++..........+.... .........+.+|.+. |++++|+| ++++|++|+.||.|++||+.+
T Consensus 20 ~v~~~~~spdg~~l~~~~~~~v~v~~~~~~--~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDG--DSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSS--CCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEECCCC--CCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 344566777666655544222222222211 1111345678899999 99999999 999999999999999999953
Q ss_pred ccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCccccceeeeccccce
Q psy15157 151 MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD----KTVKMFDYSKSSVRKAHKTIQESTFV 226 (344)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v 226 (344)
+.... .........+..|...|.+++|+|++++|++++.+ +.|++||. ++.. .....|...|
T Consensus 98 ~~~~~----------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~~~--~~~~~~~~~v 163 (615)
T 1pgu_A 98 DKESN----------SVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GNSL--GEVSGHSQRI 163 (615)
T ss_dssp EGGGT----------EEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CCEE--EECCSCSSCE
T ss_pred Ccccc----------cccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CCcc--eeeecCCccE
Confidence 21000 00234567788899999999999999999999988 78999983 3322 3334678899
Q ss_pred EEEEEecCCC-EEEEEeCCCEEEEE--------------------------cCC-CCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 227 RCLSFHPCGD-YMVVGTDHFVLRLY--------------------------SSD-GRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 227 ~~~~~~~~~~-~l~~~~~~~~i~~~--------------------------~~~-~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
.+++|+|++. .+++++.++.+++| +|+ ++++++++.||.|++||+++++.+.
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 9999999998 79999999999998 567 8999999999999999999999988
Q ss_pred eecc---cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 279 TFSK---AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 279 ~~~~---~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.+.. .|. ..|.+++|+ ++++|++++.|+.|++||+++++++..+..+.
T Consensus 244 ~~~~~~~~~~-~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 294 (615)
T 1pgu_A 244 YIEDDQEPVQ-GGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDK 294 (615)
T ss_dssp ECCBTTBCCC-SCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred EecccccccC-CceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 8843 444 479999999 99999999999999999999999999998873
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=222.15 Aligned_cols=193 Identities=19% Similarity=0.252 Sum_probs=163.7
Q ss_pred ceeEEecCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 111 ETAYVTSHKSPCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
....+.+|.+.|++++|+++ +++|++|+.||.|++||+.++ .......+.+|...|++++|+
T Consensus 45 ~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~----------------~~~~~~~~~~h~~~V~~v~~s 108 (753)
T 3jro_A 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG----------------RWSQIAVHAVHSASVNSVQWA 108 (753)
T ss_dssp EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT----------------EEEEEEEECCCSSCEEEEEEC
T ss_pred cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC----------------cccccccccCCCCCeEEEEEC
Confidence 44567899999999999987 999999999999999998642 123567788999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEec-------------CCCEEEEEeCCCEEEEE---
Q psy15157 189 PS--APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-------------CGDYMVVGTDHFVLRLY--- 250 (344)
Q Consensus 189 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~~~i~~~--- 250 (344)
|+ +..+++|+.||.|++||++++..........+...|.+++|+| ++.++++|+.|+.|++|
T Consensus 109 p~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 109 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE
T ss_pred CCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc
Confidence 99 9999999999999999999886555566667888999999999 58999999999999998
Q ss_pred ------------------------cCC---CCEEEEEeCCCcEEEEeCCCCeEEe---eecccCCCccEEEEEEccCCCE
Q psy15157 251 ------------------------SSD---GRIYCSGSKDGDIKIWDGVSSKCVA---TFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 251 ------------------------~~~---~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
+|+ +.++++|+.||.|++||++++.... ..........|++++|+|+|++
T Consensus 189 ~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 268 (753)
T 3jro_A 189 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 268 (753)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC
T ss_pred CCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCE
Confidence 677 8999999999999999998864211 1111122357999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCe
Q psy15157 301 LLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~ 319 (344)
|++|+.||.|++||+.++.
T Consensus 269 l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 269 LALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEECSSSCEECCBCCSSS
T ss_pred EEEEcCCCEEEEEecCCCC
Confidence 9999999999999998643
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-25 Score=197.76 Aligned_cols=200 Identities=17% Similarity=0.291 Sum_probs=154.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.++.|+||++ ++||+|. |++|+|||..++. ......+.+|...|++|+|+|++++|++|+.|
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~----------------~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D 168 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGD----------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS 168 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCC----------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETT
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCC----------------EEEEEEecCCCCcEEEEEECCCCCEEEEEECC
Confidence 3678999975 5777775 9999999996531 11233456788899999999999999999999
Q ss_pred CcEEEEEcCCCccccce---------------------------------------eeeccccceEEEEEecCCCEEEEE
Q psy15157 201 KTVKMFDYSKSSVRKAH---------------------------------------KTIQESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~---------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~ 241 (344)
|+|++||+.+++....+ ....|...+..+.++|++.+++++
T Consensus 169 g~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeee
Confidence 99999999876533221 112345567778888888888888
Q ss_pred eCCCEEEEE---------------------------cC-CCCEEEE--EeCCCcEEEEeCCCCeEEeeecccCCCccEEE
Q psy15157 242 TDHFVLRLY---------------------------SS-DGRIYCS--GSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291 (344)
Q Consensus 242 ~~~~~i~~~---------------------------~~-~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 291 (344)
+.|+.+++| +| ++.++++ |+.|+.|++||+.++++...+.. + ..+.+
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-~--~~v~~ 325 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-H--SQVCS 325 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-S--SCEEE
T ss_pred eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-c--cceee
Confidence 888888887 22 3345554 45799999999999998888763 3 35899
Q ss_pred EEEccCCCEEEEEe--CCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 292 LTFTRNGKYLLSSG--KDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 292 i~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+.|+|+++.+++++ .|+.|+|||+.+++++.++.+|... ...+.+++|+.
T Consensus 326 ~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~--V~~l~~spdg~ 377 (420)
T 4gga_A 326 ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR--VLSLTMSPDGA 377 (420)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSS
T ss_pred eeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcCCCC
Confidence 99999999988765 7999999999999999999998754 55566777664
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-25 Score=201.62 Aligned_cols=198 Identities=22% Similarity=0.452 Sum_probs=168.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.+.|++++| +++++++|+.||+|++||+.+ ...+..+.+|...|.+++|++
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~------------------~~~~~~~~~h~~~v~~l~~~~- 223 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT------------------GEMLNTLIHHCEAVLHLRFNN- 223 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS------------------CCEEEEECCCCSCEEEEECCT-
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC------------------CcEEEEEcCCCCcEEEEEEcC-
Confidence 34567899999999999 789999999999999999964 456778889999999999974
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccc-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKA-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------ 251 (344)
..+++|+.||.|++||+.++..... .....|...|.+++| +++++++|+.|+.+++|+
T Consensus 224 -~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 300 (435)
T 1p22_A 224 -GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 300 (435)
T ss_dssp -TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred -CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEE
Confidence 5999999999999999988764322 233457788999999 789999999999999992
Q ss_pred ---CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe---------
Q psy15157 252 ---SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR--------- 319 (344)
Q Consensus 252 ---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~--------- 319 (344)
.++.++++|+.||.|++||+++++++..+. .|. ..|.+++| ++++|++|+.||.|++||+++++
T Consensus 301 ~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~-~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 376 (435)
T 1p22_A 301 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE-GHE-ELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 376 (435)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEEEC-CCS-SCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTT
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEe-CCc-CcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccch
Confidence 356889999999999999999999998887 344 46999998 78999999999999999998877
Q ss_pred eEEEeecCCCcCceeee
Q psy15157 320 CLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 320 ~~~~~~~~~~~~~~~~~ 336 (344)
++..+.+|......+.+
T Consensus 377 ~~~~~~~h~~~v~~l~~ 393 (435)
T 1p22_A 377 CLRTLVEHSGRVFRLQF 393 (435)
T ss_dssp EEEEECCCSSCCCCEEE
T ss_pred heeeccCCCCCeEEEEe
Confidence 88999988776655543
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-25 Score=189.65 Aligned_cols=197 Identities=18% Similarity=0.314 Sum_probs=139.7
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE--EecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR--TLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
+++|+||+++ +||+| .|++|+|||+.+ ++.+. .+.+|...|++++|+|++++|++|+.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~t------------------g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~ 87 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASS------------------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS 87 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTT------------------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCC------------------CCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC
Confidence 5789999875 77776 599999999964 23333 44678889999999999999999999
Q ss_pred CCcEEEEEcCCCcccccee---------------------------------------eeccccceEEEEEecCCCEEEE
Q psy15157 200 DKTVKMFDYSKSSVRKAHK---------------------------------------TIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~---------------------------------------~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
||+|++||+++++....+. ...|...+.++.++++++++++
T Consensus 88 Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 88 SAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS 167 (318)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEE
Confidence 9999999998875433221 1123444556666666666666
Q ss_pred EeCCCEEEEEc---------------------------CCC-C--EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE
Q psy15157 241 GTDHFVLRLYS---------------------------SDG-R--IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290 (344)
Q Consensus 241 ~~~~~~i~~~~---------------------------~~~-~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 290 (344)
++.|+.+++|+ +++ . .+++++.++.|++||........... .. ..+.
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~--~~v~ 244 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AH--SQVC 244 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CS--SCEE
T ss_pred EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ce--eeee
Confidence 66666666661 111 1 12345556666666666655544443 12 3588
Q ss_pred EEEEccCCCEEEEEe--CCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 291 SLTFTRNGKYLLSSG--KDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 291 ~i~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+.|+|+++.+++++ .|+.|++||+++++++.++.+|... ..++.+++++.
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~--V~~l~~spdg~ 297 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR--VLSLTMSPDGA 297 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSS
T ss_pred eeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcCCCC
Confidence 999999999887754 7999999999999999999998765 44555666654
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-26 Score=203.57 Aligned_cols=207 Identities=17% Similarity=0.251 Sum_probs=162.3
Q ss_pred ceEEEEECCCCCE-EEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEEEEEe
Q psy15157 121 PCRAGAFSIDGQL-CATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPILASGS 198 (344)
Q Consensus 121 ~v~~~~~s~~~~~-l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~ 198 (344)
....++++|+... +++++.||.|+||++.+.... ......+.+|.+.|++++|+| ++.+|++|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~--------------~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s 101 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV--------------DKNVPLVCGHTAPVLDIAWCPHNDNVIASGS 101 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC--------------CTTCCCBCCCSSCEEEEEECTTCTTEEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC--------------CCCCceEecCCCCEEEEEeCCCCCCEEEEEe
Confidence 4456888887654 446889999999998632110 122345778999999999999 899999999
Q ss_pred CCCcEEEEEcCCCcc-----ccceeeeccccceEEEEEecCC-CEEEEEeCCCEEEEE----------------------
Q psy15157 199 KDKTVKMFDYSKSSV-----RKAHKTIQESTFVRCLSFHPCG-DYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~i~~~---------------------- 250 (344)
.||+|++||+.++.. ........|...|.+++|+|++ .++++++.|+.+++|
T Consensus 102 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 102 EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYS 181 (402)
T ss_dssp TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEE
T ss_pred CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEE
Confidence 999999999988743 1233445688899999999998 699999999999998
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE---eCCCcEEEEEcCCCee-EEE
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS---GKDSLVKLWELSSARC-LIA 323 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~---~~dg~i~vwd~~~~~~-~~~ 323 (344)
+|++.+|++++.||.|++||+++++.+..+...|.+..+.++.|+|++++|++| +.|+.|++||+++++. +..
T Consensus 182 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~ 261 (402)
T 2aq5_A 182 VDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSL 261 (402)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEE
T ss_pred EEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceE
Confidence 678999999999999999999999998888445655558999999999999999 7999999999998765 333
Q ss_pred eecCCCcCceeeeeeeccC
Q psy15157 324 YTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~ 342 (344)
+.. ........+.+++++
T Consensus 262 ~~~-~~~~~v~~~~~s~~~ 279 (402)
T 2aq5_A 262 QEL-DTSSGVLLPFFDPDT 279 (402)
T ss_dssp EEC-CCCSSCEEEEEETTT
T ss_pred Eec-cCCCceeEEEEcCCC
Confidence 332 112234455555554
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-25 Score=201.24 Aligned_cols=196 Identities=17% Similarity=0.338 Sum_probs=158.0
Q ss_pred cceeEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.....+.+|...|++++|+|++. +|++|+.||.|++|++.+..... ........+.+|...|.+++|+
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-----------~~~~~~~~~~~h~~~v~~v~~~ 240 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEH-----------RVIDAKNIFTGHTAVVEDVAWH 240 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGG-----------GEEECSEEECCCSSCEEEEEEC
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCC-----------ceeccceeecCCCCCEeeeEEe
Confidence 44566789999999999999988 99999999999999997521110 0011235667899999999999
Q ss_pred C-CCCEEEEEeCCCcEEEEEcCCCcc-ccceeeeccccceEEEEEecCCC-EEEEEeCCCEEEEE---------------
Q psy15157 189 P-SAPILASGSKDKTVKMFDYSKSSV-RKAHKTIQESTFVRCLSFHPCGD-YMVVGTDHFVLRLY--------------- 250 (344)
Q Consensus 189 ~-~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~i~~~--------------- 250 (344)
| ++.+|++++.||.|++||++++.. ........|...|++++|+|++. ++++|+.++.|++|
T Consensus 241 p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h 320 (430)
T 2xyi_A 241 LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH 320 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC
Confidence 9 677999999999999999998631 12233346788999999999987 68899999999998
Q ss_pred ---------cCCC-CEEEEEeCCCcEEEEeCCC--------------CeEEeeecccCCCccEEEEEEccCCC-EEEEEe
Q psy15157 251 ---------SSDG-RIYCSGSKDGDIKIWDGVS--------------SKCVATFSKAHDGAEISSLTFTRNGK-YLLSSG 305 (344)
Q Consensus 251 ---------~~~~-~~l~~~~~dg~i~iwd~~~--------------~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~ 305 (344)
+|++ .++++++.|+.|++||+.. .+.+..+. .|. ..|++++|+|+++ +|++++
T Consensus 321 ~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~-~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 321 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GHT-AKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC-CCS-SCEEEEEECSSSTTEEEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcC-CCC-CCceEEEECCCCCCEEEEEE
Confidence 6777 4799999999999999987 23444443 343 4699999999999 899999
Q ss_pred CCCcEEEEEcCCC
Q psy15157 306 KDSLVKLWELSSA 318 (344)
Q Consensus 306 ~dg~i~vwd~~~~ 318 (344)
.||.|++|++..+
T Consensus 399 ~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 399 EDNIMQVWQMAEN 411 (430)
T ss_dssp TTSEEEEEEECHH
T ss_pred CCCCEEEeEcccc
Confidence 9999999999754
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=200.07 Aligned_cols=190 Identities=24% Similarity=0.446 Sum_probs=163.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.+|...|.|++| +++++++|+.||.|++||+.+ ......+.+|.+.|.+++| ++.+|+
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~------------------~~~~~~~~~h~~~v~~l~~--~~~~l~ 187 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT------------------LECKRILTGHTGSVLCLQY--DERVII 187 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS------------------CCEEEEECCCSSCEEEEEC--CSSEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC------------------CeEEEEEcCCCCcEEEEEE--CCCEEE
Confidence 467788999988 799999999999999999853 4567788999999999999 778999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------------ 251 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------------ 251 (344)
+|+.||+|++||+.+++....+ ..|...|.+++|+ +.++++|+.|+.+++|+
T Consensus 188 sg~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 188 TGSSDSTVRVWDVNTGEMLNTL--IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEETTSCEEEEESSSCCEEEEE--CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEE--cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEE
Confidence 9999999999999998765433 4578889999996 46999999999999992
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
.++.++++|+.||.|++||+++++.+..+. .|. ..|.++.| ++++|++|+.||.|++||+++++++..+.+|....
T Consensus 264 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~-~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v 339 (435)
T 1p22_A 264 FDDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHK-RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 339 (435)
T ss_dssp EETTEEEEEETTSEEEEEETTTCCEEEEEE-CCS-SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred eCCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCC-CcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcE
Confidence 356789999999999999999999998887 444 46999998 47899999999999999999999999999987765
Q ss_pred ceee
Q psy15157 332 QQFE 335 (344)
Q Consensus 332 ~~~~ 335 (344)
..+.
T Consensus 340 ~~~~ 343 (435)
T 1p22_A 340 RCIR 343 (435)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5444
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-24 Score=196.87 Aligned_cols=222 Identities=20% Similarity=0.372 Sum_probs=173.5
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCC----------------------CCcCCCCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS----------------------EPQNDQQG 168 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~----------------------~~~~~~~~ 168 (344)
....+.+|.+.|++++|+ ++++++|+.||+|++||+.++......... ...++...
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSS
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCC
Confidence 455678999999999997 679999999999999999765432222110 01223445
Q ss_pred CceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEE
Q psy15157 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLR 248 (344)
Q Consensus 169 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~ 248 (344)
...+..+.+|...|.+++| ++..+++|+.||.|++||+++++....+ ..|...+.++.| ++.++++++.|+.++
T Consensus 229 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~d~~i~ 302 (445)
T 2ovr_B 229 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL--QGHTNRVYSLQF--DGIHVVSGSLDTSIR 302 (445)
T ss_dssp CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEE--CCCSSCEEEEEE--CSSEEEEEETTSCEE
T ss_pred CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEe--cCCCCceEEEEE--CCCEEEEEeCCCeEE
Confidence 6677788899999999999 6788999999999999999887654433 457788999999 889999999999999
Q ss_pred EE---------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-CCccEEEEEEccCCCEEEEEeC
Q psy15157 249 LY---------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-DGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 249 ~~---------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+| .+++.++++|+.||.|++||+++++.+..+.... +...|.+++|+ +++|++|+.
T Consensus 303 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~ 380 (445)
T 2ovr_B 303 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSD 380 (445)
T ss_dssp EEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEET
T ss_pred EEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeC
Confidence 99 3467899999999999999999999988886421 23579999995 689999999
Q ss_pred CCcEEEEEcCCCeeEEEeec---CCCcCceeeeeeeccC
Q psy15157 307 DSLVKLWELSSARCLIAYTG---AGSMGQQFELTLTVDA 342 (344)
Q Consensus 307 dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 342 (344)
||.|++||+.+++.+..+.. .+..+....+.+++++
T Consensus 381 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 419 (445)
T 2ovr_B 381 DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK 419 (445)
T ss_dssp TSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred CCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCE
Confidence 99999999999999988832 2333445555555553
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-24 Score=196.70 Aligned_cols=193 Identities=26% Similarity=0.484 Sum_probs=161.6
Q ss_pred eeEEecCCCce-EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPC-RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v-~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+.+|.+.| .|+.+ +|+++++|+.||+|++||+.+ ...+..+.+|.+.|.+++|+
T Consensus 111 ~~~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~------------------~~~~~~~~~h~~~v~~~~~~-- 168 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVT------------------GKCLRTLVGHTGGVWSSQMR-- 168 (445)
T ss_dssp CEEEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTT------------------CCEEEECCCCSSCEEEEEEE--
T ss_pred eEEecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCC------------------CcEEEEEcCCCCCEEEEEec--
Confidence 34678999875 55554 689999999999999999853 45677888999999999997
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc-------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------- 251 (344)
+..+++|+.||+|++||+.+++.... ...|...|.++.|+ +..+++|+.|+.+++|+
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 244 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 244 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEE--ECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEE
Confidence 56999999999999999998865433 34577889999985 57899999999999992
Q ss_pred --CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 252 --SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 252 --~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
.++.++++|+.||.|++||+++++.+..+. .|. ..|.++.| ++.++++|+.||.|++||+++++++..+.+|..
T Consensus 245 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~-~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 320 (445)
T 2ovr_B 245 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHT-NRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 320 (445)
T ss_dssp EEECSSCEEEEETTSCEEEEEGGGTEEEEEEC-CCS-SCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS
T ss_pred EEECCCEEEEEcCCCEEEEEECCCCcEeEEec-CCC-CceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc
Confidence 357789999999999999999999888886 343 46999998 789999999999999999999999999988866
Q ss_pred cCcee
Q psy15157 330 MGQQF 334 (344)
Q Consensus 330 ~~~~~ 334 (344)
....+
T Consensus 321 ~v~~~ 325 (445)
T 2ovr_B 321 LTSGM 325 (445)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 54433
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-24 Score=219.15 Aligned_cols=184 Identities=24% Similarity=0.381 Sum_probs=161.1
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP- 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~- 189 (344)
....+.+|.+.|++++|+|+++++++|+.||+|+|||+.+ +..+..+.+|...|.+++|+|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~ 710 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT------------------GKLVHTYDEHSEQVNCCHFTNK 710 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCEEEEEECCSSCEEEEEECSS
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC------------------CceEEEEcCCCCcEEEEEEecC
Confidence 4556789999999999999999999999999999999954 456788899999999999999
Q ss_pred -CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 190 -SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 190 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
++.++++|+.||.|++||+.+++.... ...|...|.+++|+|+++++++++.|+.+++|
T Consensus 711 ~~~~~l~sg~~d~~v~vwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~ 788 (1249)
T 3sfz_A 711 SNHLLLATGSNDFFLKLWDLNQKECRNT--MFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFL 788 (1249)
T ss_dssp SSCCEEEEEETTSCEEEEETTSSSEEEE--ECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-
T ss_pred CCceEEEEEeCCCeEEEEECCCcchhhe--ecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceeccccccc
Confidence 455899999999999999998865443 34688899999999999999999999999998
Q ss_pred ------------------------------------------------------------cCCCCEEEEEeCCCcEEEEe
Q psy15157 251 ------------------------------------------------------------SSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 251 ------------------------------------------------------------~~~~~~l~~~~~dg~i~iwd 270 (344)
+|++.++++++.||.|++||
T Consensus 789 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd 868 (1249)
T 3sfz_A 789 SSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWN 868 (1249)
T ss_dssp -------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEE
T ss_pred ccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 24577888999999999999
Q ss_pred CCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+.++..+..+. .|. ..|.+++|+|+|++|++++.||.|++||+.
T Consensus 869 ~~~~~~~~~~~-~h~-~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 869 IDSRLKVADCR-GHL-SWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp TTTTEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred cCCCceeeecC-CCc-cceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 99999888876 444 469999999999999999999999999865
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-26 Score=198.62 Aligned_cols=192 Identities=14% Similarity=0.211 Sum_probs=146.7
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy15157 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKM 205 (344)
Q Consensus 126 ~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 205 (344)
.+.+++.++++|+.||+|++||+.++ ..+..+. ...|.++.|+|+ +++++.|++|++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~------------------~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~ 99 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDS------------------KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLL 99 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSS------------------SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCC------------------cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEE
Confidence 34467889999999999999999642 2233333 466778888888 999999999999
Q ss_pred EEcCC---------CccccceeeeccccceEEEEEec--CCCEEEEEeCCCEEEEE------------------------
Q psy15157 206 FDYSK---------SSVRKAHKTIQESTFVRCLSFHP--CGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 206 wd~~~---------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~i~~~------------------------ 250 (344)
|+... ++....+. ..+...|.+++|+| +++++++++.|+.+++|
T Consensus 100 w~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~ 178 (343)
T 3lrv_A 100 LYPGNQITILDSKTNKVLREIE-VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVL 178 (343)
T ss_dssp EETTTEEEEEETTTCCEEEEEE-CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEE
T ss_pred EEccCceEEeecCCcceeEEee-cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEE
Confidence 97763 22222222 23457799999999 99999999999999998
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEE-eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec---
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCV-ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG--- 326 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--- 326 (344)
+|+|.++++|+.||.|++||+++++.+ ..+...|. .+|++++|+|+|.+|++++ |+.|++||+++++++..+..
T Consensus 179 ~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~-~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~ 256 (343)
T 3lrv_A 179 HKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE-AKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTI 256 (343)
T ss_dssp CTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTT-SCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCC-CCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccc
Confidence 789999999999999999999999877 66664355 5799999999999999999 45999999999987766554
Q ss_pred CCCcCceeeeeeeccCC
Q psy15157 327 AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (344)
+........+.+++++.
T Consensus 257 ~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 257 PEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp -----CCEEEEECTTSS
T ss_pred ccccccceEEEECCCCC
Confidence 22221113466666543
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=190.18 Aligned_cols=198 Identities=13% Similarity=0.165 Sum_probs=148.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+.+|.+.|++++|+|||++|++|+.|+ ++||++++. ..... .+...+..+++.++++.+
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~------------------~~~~~--~~~~~~~~~~~~~~~~~~ 73 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPV------------------AHIMS--QEMRHLSKVRMLHRTNYV 73 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTE------------------EEEEE--EECSCCCEEEECTTSSEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCc------------------ceeee--eecCCeEEEEEcCCCCEE
Confidence 478999999999999999999998775 789998642 11211 122247788899888866
Q ss_pred -EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC------------------
Q psy15157 195 -ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR------------------ 255 (344)
Q Consensus 195 -~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~------------------ 255 (344)
++++.|++|++||+.+++....+ .+...|.+++++++. ++++ .++.+++|+....
T Consensus 74 ~~~~~~d~~v~iWd~~~~~~~~~~---~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~ 147 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKKQDVSRI---KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN 147 (355)
T ss_dssp EEECSSTTEEEEEETTTTEEEEEE---ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET
T ss_pred EEEECCccEEEEEECCCCcEEEEE---ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEc
Confidence 56788899999999988665433 356689999998753 4444 4788999976554
Q ss_pred -EEEE--EeCCCcEEEEeCCCCe----------------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCc-EEEEEc
Q psy15157 256 -IYCS--GSKDGDIKIWDGVSSK----------------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL-VKLWEL 315 (344)
Q Consensus 256 -~l~~--~~~dg~i~iwd~~~~~----------------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~-i~vwd~ 315 (344)
+++. |+.||.|++||+.+++ ++..+. .|. ..|++++|+|+|++|++|+.|++ |++||+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~-~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHT-NPIKMVRLNRKSDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEEC-CCS-SCEEEEEECTTSSEEEEEETTCSEEEEEET
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccC-CceEEEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 4554 6899999999999865 144554 454 47999999999999999999998 999999
Q ss_pred CCCeeEEEee-c-CCCcCceeeeeeeccCC
Q psy15157 316 SSARCLIAYT-G-AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 316 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 343 (344)
++++++..+. + |. .....+.|++++.
T Consensus 226 ~~~~~~~~~~~g~h~--~~v~~~~~s~~~~ 253 (355)
T 3vu4_A 226 EDGVLVREFRRGLDR--ADVVDMKWSTDGS 253 (355)
T ss_dssp TTCCEEEEEECTTCC--SCEEEEEECTTSC
T ss_pred CCCcEEEEEEcCCCC--CcEEEEEECCCCC
Confidence 9999999998 4 54 4556667777654
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=191.02 Aligned_cols=183 Identities=20% Similarity=0.235 Sum_probs=148.8
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE--cCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF--HPS 190 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~ 190 (344)
..+.+|.+.|++++|+|++++|++|+.||.|++||+.+. . ...+..|...|.+++| +|+
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~------------------~-~~~~~~~~~~v~~~~~~~~~~ 140 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN------------------Q-AIQIAQHDAPVKTIHWIKAPN 140 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT------------------E-EEEEEECSSCEEEEEEEECSS
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC------------------C-ceeeccccCceEEEEEEeCCC
Confidence 567899999999999999999999999999999999642 2 3345679999999999 899
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeec---------------------------------------cccceEEEEE
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQ---------------------------------------ESTFVRCLSF 231 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------------------------------~~~~v~~~~~ 231 (344)
+.+|++++.||.|++||+++++....+.... ....+.++.+
T Consensus 141 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (368)
T 3mmy_A 141 YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAI 220 (368)
T ss_dssp CEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEE
T ss_pred CCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEE
Confidence 9999999999999999998876443332110 1123455556
Q ss_pred ecCCCE----EEEEeCCCEEEEE--------------------------------------cCCCCEEEEEeCCCcEEEE
Q psy15157 232 HPCGDY----MVVGTDHFVLRLY--------------------------------------SSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 232 ~~~~~~----l~~~~~~~~i~~~--------------------------------------~~~~~~l~~~~~dg~i~iw 269 (344)
.++... +++++.++.+++| +|++++|++|+.||.|++|
T Consensus 221 ~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iw 300 (368)
T 3mmy_A 221 FKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW 300 (368)
T ss_dssp EECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred cccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEE
Confidence 555544 9999999988887 5788899999999999999
Q ss_pred eCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 270 DGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
|+.+++++..+. .|. ..|.+++|+|+|++|++++.|+..+.|++-
T Consensus 301 d~~~~~~~~~~~-~~~-~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 301 DKDARTKLKTSE-QLD-QPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp ETTTTEEEEECC-CCS-SCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred ECCCCcEEEEec-CCC-CCceEEEECCCCCeEEEEeccccccccccc
Confidence 999999998887 343 479999999999999999998866555543
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=194.89 Aligned_cols=180 Identities=13% Similarity=0.134 Sum_probs=139.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC-----CeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE-----EVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~ 191 (344)
.|...|++++|||+|++||+++.||.|+|||... .+..+. |.. .|.+++|+|+|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--------------------~l~~l~-~~~~~~~~sv~svafSPDG 141 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--------------------MLTNLD-SKGNLSSRTYHCFEWNPIE 141 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--------------------EEEECC-CSSCSTTTCEEEEEECSSS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--------------------eeeecc-CCCccccccEEEEEEcCCC
Confidence 6688999999999999999999999999999642 455556 655 59999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCcc-------cccee--eeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSV-------RKAHK--TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSK 262 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~-------~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~ 262 (344)
++|++|+.||+|++||+.++.. ...+. ..+|...|.+++|+|+| ++ +++.
T Consensus 142 ~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--La-------------------ass~ 200 (588)
T 2j04_A 142 SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LV-------------------AALS 200 (588)
T ss_dssp SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EE-------------------EEET
T ss_pred CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EE-------------------EEeC
Confidence 9999999999999999988753 11111 13466799999999966 33 6788
Q ss_pred CCcEEEEeCCCCeE---EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeee
Q psy15157 263 DGDIKIWDGVSSKC---VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLT 339 (344)
Q Consensus 263 dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (344)
|+.|++||+..++. ..++..+|. ..|.+++|+ |++|++++ ++.|++||+.+++......+|.+....+.+..+
T Consensus 201 D~tVrlWd~~~~~~~~~~~tL~~~h~-~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s 276 (588)
T 2j04_A 201 NNSVFSMTVSASSHQPVSRMIQNASR-RKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHE 276 (588)
T ss_dssp TCCEEEECCCSSSSCCCEEEEECCCS-SCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTC
T ss_pred CCeEEEEECCCCccccceeeeccccc-CcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeC
Confidence 99999999988773 244543444 469999999 68999998 699999999988874444477776666555224
Q ss_pred ccC
Q psy15157 340 VDA 342 (344)
Q Consensus 340 ~~~ 342 (344)
+++
T Consensus 277 ~d~ 279 (588)
T 2j04_A 277 KES 279 (588)
T ss_dssp SSC
T ss_pred CCC
Confidence 443
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-24 Score=207.87 Aligned_cols=207 Identities=12% Similarity=0.084 Sum_probs=159.1
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcccccc----------CCCCC--Cc---------------CCCCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSS----------MESSE--PQ---------------NDQQGH 169 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~----------~~~~~--~~---------------~~~~~~ 169 (344)
+|...|++++|+|+|++||+|+.||+|+|||+.+...... .+... .. .-..+.
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 8999999999999999999999999999999976421000 00000 00 000112
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccc--e-eee-ccccceEEEEEe-----cCC---CE
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA--H-KTI-QESTFVRCLSFH-----PCG---DY 237 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~-~~~-~~~~~v~~~~~~-----~~~---~~ 237 (344)
.++..+.+|.+.|++++|+|+| +|++|+.|++|++||++++..... . ... +|...|++++|+ ||| .+
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~ 644 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSIL 644 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceE
Confidence 4577889999999999999999 999999999999999987654321 1 111 678889999999 885 89
Q ss_pred EEEEeCCCEEEEEc------------------------------------------------------CCCCEEEEEeCC
Q psy15157 238 MVVGTDHFVLRLYS------------------------------------------------------SDGRIYCSGSKD 263 (344)
Q Consensus 238 l~~~~~~~~i~~~~------------------------------------------------------~~~~~l~~~~~d 263 (344)
|++|+.|+.|++|+ +++..++ +.+
T Consensus 645 l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~--~~~ 722 (902)
T 2oaj_A 645 MVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLI--TGF 722 (902)
T ss_dssp EEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEE--ECS
T ss_pred EEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEE--Eec
Confidence 99999999999993 2222333 337
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEE---E------EccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSL---T------FTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i---~------~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
..|+||++.++++.+... .+. ..+.++ . |++++..|++++.||.|++|++.+++++..+.-..
T Consensus 723 ~~ir~~~~~~~k~~~k~~-~~~-~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~~~ 794 (902)
T 2oaj_A 723 DDIRLITLGKSKSTHKGF-KYP-LAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHIPF 794 (902)
T ss_dssp SEEEEECTTCCCEEEEEC-SSC-EEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEeCccccceeeEc-ccc-eeeeEEEEEEeccccccccCceEEEEEeCCCcEEEEECcchHHHhhccCCc
Confidence 789999999999887774 333 456665 5 68889999999999999999999999999987643
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-24 Score=184.49 Aligned_cols=165 Identities=10% Similarity=0.097 Sum_probs=128.7
Q ss_pred ecCCCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEcCCCC
Q psy15157 116 TSHKSPCRAGAFSI--DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 116 ~~h~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 192 (344)
.+|.+.|.+++|+| +++++++|+.||+|++||++++ ...... ..|...|.+++|+|++.
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~------------------~~~~~~~~~~~~~i~~~~~~pdg~ 183 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD------------------SQYIVHSAKSDVEYSSGVLHKDSL 183 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS------------------CEEEEECCCSSCCCCEEEECTTSC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC------------------cEEEEEecCCCCceEEEEECCCCC
Confidence 46778999999999 9999999999999999999642 233333 34566899999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccc-cceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVR-KAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
+|++|+.||.|++||+++++.. ..+. ..|...|++++|+|+|.+|+ +++ |+.|++||+
T Consensus 184 ~lasg~~dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~~l~-------------------s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 184 LLALYSPDGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGYWMV-------------------VEC-DQTVVCFDL 242 (343)
T ss_dssp EEEEECTTSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSSEEE-------------------EEE-SSBEEEEET
T ss_pred EEEEEcCCCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCCEEE-------------------EEe-CCeEEEEEc
Confidence 9999999999999999988654 2232 23788999999999666555 677 459999999
Q ss_pred CCCeEEeeecccC-CCccE--EEEEEccCCCEEEEEeC-CCcEEEEEcCCCe
Q psy15157 272 VSSKCVATFSKAH-DGAEI--SSLTFTRNGKYLLSSGK-DSLVKLWELSSAR 319 (344)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~v--~~i~~~~~~~~l~s~~~-dg~i~vwd~~~~~ 319 (344)
++++.+..+.... +...+ .+++|+|+|++|++++. |+.|++|++.++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 243 RKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp TSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 9987765554210 11123 36999999999999988 9999999996653
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=195.62 Aligned_cols=183 Identities=11% Similarity=0.107 Sum_probs=144.9
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
+-...|.+++|||||+++||++.|++|+ |... . ..+.+|...|.+++|+|+|
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~------------------~---~~l~gh~~~v~~V~FsPdg----- 64 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKY------------------A---KDINCNSKNLFHVKEFPLE----- 64 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECC------------------C---SCCSSBGGGTEEEEEECCC-----
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccc------------------c---ceecCCCccEEEEEECCCC-----
Confidence 4457899999999999999999999999 6432 1 1336899999999999998
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------------c
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------------S 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------------~ 251 (344)
.++.+.+|+.... ..+. ..+...|.+++|+|+|.+|++++.+|.+++| +
T Consensus 65 --~~~~~~~~~~~~~---~~~~-~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafS 138 (588)
T 2j04_A 65 --FENKLDFELAQQN---GLLN-SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWN 138 (588)
T ss_dssp --CCCTTTTSCCCSS---CSST-TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEEC
T ss_pred --CcceEEEEeCCCc---eEee-cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeeccCCCccccccEEEEEEc
Confidence 5666666664432 2222 1346789999999999999999999999998 5
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeE-------Eeeec---ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee-
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKC-------VATFS---KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC- 320 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~---~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~- 320 (344)
|+|++|++|+.||+|++||+.+++. +.++. .+|. .+|.+++|+|+| +++++.|+.|++||+.+++.
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~-~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSK-DWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCC-CCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccccc-ccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc
Confidence 8999999999999999999998752 45552 3444 589999999999 88899999999999988874
Q ss_pred --EEEee-cCCCcCceeee
Q psy15157 321 --LIAYT-GAGSMGQQFEL 336 (344)
Q Consensus 321 --~~~~~-~~~~~~~~~~~ 336 (344)
..+++ +|......+.+
T Consensus 216 ~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp CCEEEEECCCSSCCCCEEE
T ss_pred cceeeecccccCcEEEEEE
Confidence 35674 66555555444
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-22 Score=175.55 Aligned_cols=201 Identities=14% Similarity=0.172 Sum_probs=159.9
Q ss_pred EEecCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+.+| ..+.+++|+|+++++ ++++.|+.|++||+.+ .+....+..+. .+.+++|+|+++
T Consensus 27 ~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~------------------~~~~~~~~~~~-~v~~~~~spdg~ 86 (391)
T 1l0q_A 27 TIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT------------------NNVIATVPAGS-SPQGVAVSPDGK 86 (391)
T ss_dssp EEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT------------------TEEEEEEECSS-SEEEEEECTTSS
T ss_pred EeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCC------------------CeEEEEEECCC-CccceEECCCCC
Confidence 44555 458999999999976 6777999999999854 34455555444 899999999999
Q ss_pred EEE-EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEE-EEEeCCCEEEEE--------------------
Q psy15157 193 ILA-SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 193 ~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~-------------------- 250 (344)
.|+ +++.|+.|++||+.+++....+ .....+.+++|+|+++++ ++++.++.+++|
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 163 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTVAGTV---KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGI 163 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE---ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEE
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEE---eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceE
Confidence 775 5556799999999987654333 344568999999999988 577779999998
Q ss_pred --cCCCCEE-EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe---CCCcEEEEEcCCCeeEEEe
Q psy15157 251 --SSDGRIY-CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG---KDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 --~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~~~~ 324 (344)
+++++++ ++++.++.|++||+++++.+..+. .+ ..+.+++|+|++++|++++ .++.|++||+.+++.+..+
T Consensus 164 ~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 164 AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cC--CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 6788877 677889999999999998887775 22 3689999999999999888 6899999999999999999
Q ss_pred ecCCCcCceeeeeeeccCC
Q psy15157 325 TGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~ 343 (344)
..+.. ...+.++++++
T Consensus 241 ~~~~~---~~~~~~s~dg~ 256 (391)
T 1l0q_A 241 PVGPD---PAGIAVTPDGK 256 (391)
T ss_dssp ECCSS---EEEEEECTTSS
T ss_pred ecCCC---ccEEEEccCCC
Confidence 87654 24556666553
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-22 Score=178.94 Aligned_cols=202 Identities=13% Similarity=0.138 Sum_probs=165.4
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+.+|.+.|++++|+++++++++++.|+.|++||+++ ......+..|...+.+++|+|+++.+
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~l 226 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT------------------LAYKATVDLTGKWSKILLYDPIRDLV 226 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT------------------CCEEEEEECSSSSEEEEEEETTTTEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC------------------ceEEEEEcCCCCCeeEEEEcCCCCEE
Confidence 358899999999999999999999999999999853 34566777899999999999999977
Q ss_pred E-EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe--------CCCEEEEE---------------
Q psy15157 195 A-SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT--------DHFVLRLY--------------- 250 (344)
Q Consensus 195 ~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~~i~~~--------------- 250 (344)
+ +++.|+.|++||+++++....+ .....+.+++|+|+|+++++++ .++.+++|
T Consensus 227 ~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~ 303 (433)
T 3bws_A 227 YCSNWISEDISVIDRKTKLEIRKT---DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG 303 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEC---CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEe---cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC
Confidence 4 5558999999999887654333 2345589999999999999988 47888888
Q ss_pred -------cCCCC-EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC---------------C
Q psy15157 251 -------SSDGR-IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK---------------D 307 (344)
Q Consensus 251 -------~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~---------------d 307 (344)
+|+++ ++++++.|+.|++||+.+++.+..+. +. ..+.+++|+|+|++|++++. |
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~d 380 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP--VF-DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVL 380 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--CS-SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--CC-CCCCeEEEcCCCCEEEEEecCCCccccccccccccc
Confidence 57776 45677899999999999998887775 22 35899999999999988876 5
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 308 SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 308 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|.|++||+.+++.+..+.++. ....+.++++++
T Consensus 381 g~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~ 413 (433)
T 3bws_A 381 GKVYVIDTTTDTVKEFWEAGN---QPTGLDVSPDNR 413 (433)
T ss_dssp CEEEEEETTTTEEEEEEECSS---SEEEEEECTTSC
T ss_pred eEEEEEECCCCcEEEEecCCC---CCceEEEcCCCC
Confidence 799999999999999988743 345666666653
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-21 Score=171.41 Aligned_cols=186 Identities=16% Similarity=0.185 Sum_probs=150.8
Q ss_pred CCceEEEEECCCCCEEE-EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE-EE
Q psy15157 119 KSPCRAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL-AS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~-sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s 196 (344)
...+.+++|+|++++++ +++.|+.|++||+.+ .+....+.. ...+.+++|+|+++.+ ++
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~------------------~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS------------------NTVAGTVKT-GKSPLGLALSPDGKKLYVT 133 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT------------------TEEEEEEEC-SSSEEEEEECTTSSEEEEE
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECCC------------------CeEEEEEeC-CCCcceEEECCCCCEEEEE
Confidence 34999999999999775 555679999999964 333444443 4568999999999966 78
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEE-EEEeCCCEEEEE----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGTDHFVLRLY----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~----------------------~~~ 253 (344)
++.|+.|++||+.+++....+. ....+.+++|+|+++++ +++..++.+++| +++
T Consensus 134 ~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 210 (391)
T 1l0q_A 134 NNGDKTVSVINTVTKAVINTVS---VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPE 210 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE---CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTT
T ss_pred eCCCCEEEEEECCCCcEEEEEe---cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCC
Confidence 8889999999999876544332 34567999999999988 566778999988 688
Q ss_pred CCEEEEEe---CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 254 GRIYCSGS---KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL-LSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 254 ~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
++++++++ .++.|++||+.+++.+..+.. +. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+..
T Consensus 211 g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~--~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~ 287 (391)
T 1l0q_A 211 GTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-GP--DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKN 287 (391)
T ss_dssp SSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-CS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred CCEEEEEecCcCCCcEEEEECCCCeEEEEEec-CC--CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcC
Confidence 99888888 689999999999998888764 32 47899999999988 5678899999999999999999876643
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-21 Score=172.53 Aligned_cols=200 Identities=16% Similarity=0.147 Sum_probs=155.7
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCC---eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDA---SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
...+.+|...|.+++|+|+|++|++++.|+ .|++||+.++ + ...+..|...+.+++|+
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg------------------~-~~~l~~~~~~~~~~~~s 231 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG------------------A-VRQVASFPRHNGAPAFS 231 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC------------------C-EEEEECCSSCEEEEEEC
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC------------------c-EEEeecCCCcccCEEEc
Confidence 456778999999999999999999999885 9999999642 2 23466788899999999
Q ss_pred CCCCEEE-EEeCCCc--EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-CC--EEEEE------------
Q psy15157 189 PSAPILA-SGSKDKT--VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HF--VLRLY------------ 250 (344)
Q Consensus 189 ~~~~~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~i~~~------------ 250 (344)
|+++.|+ +++.|+. |++||+.+++.. ....+...+.+++|+|+|++|++++. ++ .+.+|
T Consensus 232 pdg~~la~~~~~~g~~~i~~~d~~~~~~~---~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~ 308 (415)
T 2hqs_A 232 PDGSKLAFALSKTGSLNLYVMDLASGQIR---QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW 308 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEE---ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCCEE---eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEec
Confidence 9999777 7776665 999999887542 33345677999999999999988876 44 45543
Q ss_pred ----------cCCCCEEEEEeCC---CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC---cEEEEE
Q psy15157 251 ----------SSDGRIYCSGSKD---GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS---LVKLWE 314 (344)
Q Consensus 251 ----------~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg---~i~vwd 314 (344)
+|+|++|++++.+ ..|++||+.+++.. .+. .+. .+.+++|+|+|++|++++.++ .|++||
T Consensus 309 ~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~-~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 309 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLS-STF--LDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECC-CSS--SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-Eec-CCC--CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 7999999888765 58999999998774 343 222 589999999999999988777 799999
Q ss_pred cCCCeeEEEeecCCCcCceeeeeeec
Q psy15157 315 LSSARCLIAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (344)
+. ++.+..+.++.+. ..+..|++
T Consensus 385 ~~-g~~~~~l~~~~~~--v~~~~~~~ 407 (415)
T 2hqs_A 385 TD-GRFKARLPATDGQ--VKFPAWSP 407 (415)
T ss_dssp TT-SCCEEECCCSSSE--EEEEEECC
T ss_pred CC-CCcEEEeeCCCCC--CcCCcccc
Confidence 96 6667777776543 34445544
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-21 Score=173.42 Aligned_cols=198 Identities=13% Similarity=0.167 Sum_probs=159.0
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE-----EecCCcCCeEEEEEcCCCCE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-----TLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~ 193 (344)
...+.+++|+|++.++++++.|+.|++||+.++ .... .+.+|.+.|.+++|++++.+
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 183 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSG------------------QTVRLSPPEKYKKKLGFVETISIPEHNEL 183 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTC------------------CEEEECCCHHHHTTCCEEEEEEEGGGTEE
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCC------------------eEeeecCcccccccCCceeEEEEcCCCEE
Confidence 345679999998888889989999999998643 2223 34578899999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------------- 250 (344)
+++++.|+.|++||+.+++....+ ..+...+.+++|+|+++++++++ .++.+.+|
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 261 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATV--DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLL 261 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEE--ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEE
T ss_pred EEEECCCCEEEEEECCCceEEEEE--cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEE
Confidence 999999999999999887654433 35677899999999999886555 78999998
Q ss_pred cCCCCEEEEEe--------CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCeeE
Q psy15157 251 SSDGRIYCSGS--------KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL-LSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 251 ~~~~~~l~~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~ 321 (344)
+|+|+++++++ .|+.|++||+.+++.+..+. +. ..+.+++|+|+++++ ++++.|+.|++||+.+++.+
T Consensus 262 ~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--~~-~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 262 SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--PP-GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--EE-ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--CC-CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 67898998888 58899999999998877663 22 258899999999765 56689999999999999998
Q ss_pred EEeecCCCcCceeeeeeeccC
Q psy15157 322 IAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~ 342 (344)
..+.... ....+.+++++
T Consensus 339 ~~~~~~~---~~~~~~~s~dg 356 (433)
T 3bws_A 339 KSIPVFD---KPNTIALSPDG 356 (433)
T ss_dssp EEEECSS---SEEEEEECTTS
T ss_pred EEecCCC---CCCeEEEcCCC
Confidence 8886432 23455566554
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-21 Score=167.28 Aligned_cols=170 Identities=11% Similarity=0.165 Sum_probs=118.1
Q ss_pred CceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
..+..+++.++++++ ++|+.|++|++||..++ ..+..+. |...|.+++|+++. ++++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~------------------~~~~~~~-~~~~v~~v~~~~~~--~~~~- 116 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK------------------QDVSRIK-VDAPVKDLFLSREF--IVVS- 116 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTT------------------EEEEEEE-CSSCEEEEEECSSE--EEEE-
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCC------------------cEEEEEE-CCCceEEEEEcCCE--EEEE-
Confidence 458889999988877 56788899999998643 3344443 55678888887653 2222
Q ss_pred CCCcEEEEEcCCC-ccccceeeeccccceEEEEEecCCCEEEE--EeCCCEEEEE-------------------------
Q psy15157 199 KDKTVKMFDYSKS-SVRKAHKTIQESTFVRCLSFHPCGDYMVV--GTDHFVLRLY------------------------- 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~~~~i~~~------------------------- 250 (344)
.|+.|++||+.++ +....+.. ....+++++ .++++ |+.++.+++|
T Consensus 117 ~~~~i~i~d~~~~~~~~~~~~~-----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~ 189 (355)
T 3vu4_A 117 YGDVISVFKFGNPWKRITDDIR-----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGV 189 (355)
T ss_dssp ETTEEEEEESSTTCCBSSCCEE-----EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCE
T ss_pred EcCEEEEEECCCCceeeEEecc-----CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccE
Confidence 2566777776655 33322221 222233444 33333 2334333322
Q ss_pred --------------cCCCCEEEEEeCCCc-EEEEeCCCCeEEeeeccc-CCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 251 --------------SSDGRIYCSGSKDGD-IKIWDGVSSKCVATFSKA-HDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 251 --------------~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+|+|++|++|+.|++ |++||+++++++..+..+ |. ..|.+++|+|+|++|++++.|++|++||
T Consensus 190 ~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~-~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 190 LIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR-ADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC-SCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred EEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC-CcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 456777889999998 999999999999998743 54 5799999999999999999999999999
Q ss_pred cCCCe
Q psy15157 315 LSSAR 319 (344)
Q Consensus 315 ~~~~~ 319 (344)
++.+.
T Consensus 269 ~~~~~ 273 (355)
T 3vu4_A 269 IFNDQ 273 (355)
T ss_dssp SSCCS
T ss_pred ccCCC
Confidence 98753
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8.6e-21 Score=170.62 Aligned_cols=173 Identities=13% Similarity=0.186 Sum_probs=128.3
Q ss_pred cCCCceEEEEECCCCCEEE----EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-C
Q psy15157 117 SHKSPCRAGAFSIDGQLCA----TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-A 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~----sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~ 191 (344)
.|.+.|++++|+|+|++|+ +|+.|+.|+|||+.+...... ...........+.+|...|.+++|+|+ +
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~-------~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 162 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK-------QQKRPFAYHKLLKDAGGMVIDMKWNPTVP 162 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC-------SSCCCSEEEECCCSGGGSEEEEEECSSCT
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCc-------CCcceeeeeeccCCCCCceEEEEECCCCC
Confidence 5678899999999999999 889999999999864311000 000111235667789999999999998 7
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
.+|++++.||+|++||++++.. ......|...+.+++|+|+|++|+ +|+.||.|++||.
T Consensus 163 ~~las~s~Dg~v~iwD~~~~~~--~~~~~~~~~~v~~v~wspdg~~la-------------------sgs~dg~v~iwd~ 221 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVTETVK--VCATLPSTVAVTSVCWSPKGKQLA-------------------VGKQNGTVVQYLP 221 (434)
T ss_dssp TEEEEEETTSCEEEEEESSSEE--EEEEECGGGCEEEEEECTTSSCEE-------------------EEETTSCEEEECT
T ss_pred CEEEEEECCCeEEEEEcCCCcc--eeeccCCCCceeEEEEcCCCCEEE-------------------EEcCCCcEEEEcc
Confidence 8999999999999999998743 233345678899999999666555 7888999999998
Q ss_pred CCCeEEeeecccC-----CCccEEEEEEccCCCEEEEE-eCCCc------EEEEEcCCC
Q psy15157 272 VSSKCVATFSKAH-----DGAEISSLTFTRNGKYLLSS-GKDSL------VKLWELSSA 318 (344)
Q Consensus 272 ~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~~l~s~-~~dg~------i~vwd~~~~ 318 (344)
+ ++....+..+. +...|.++.|++++.++++. +.||. +++|++++.
T Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 222 T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred C-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 8 54444443211 11369999999998887653 34433 899999865
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.6e-21 Score=171.86 Aligned_cols=198 Identities=13% Similarity=0.087 Sum_probs=138.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE---
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA--- 195 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~--- 195 (344)
...++.+++++++.++++++.|+ ++||+............ .. ........... ..+...|.+++|+|++++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~ 111 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGD-DP-NKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACM 111 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTC-CT-TCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhccccc-Cc-ccccccCcccc-ccCCCcccEEEEcCCCCEEEEEE
Confidence 34688999999999999999988 99998754311100000 00 00000001111 23677899999999999998
Q ss_pred -EEeCCCcEEEEEcCCC-----cc---ccce-eeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCc
Q psy15157 196 -SGSKDKTVKMFDYSKS-----SV---RKAH-KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGD 265 (344)
Q Consensus 196 -s~~~dg~i~iwd~~~~-----~~---~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~ 265 (344)
+|+.|+.|++||+.+. +. .... ....|...|.+++|+|+ ++.+|++++.||.
T Consensus 112 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~------------------~~~~las~s~Dg~ 173 (434)
T 2oit_A 112 MSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPT------------------VPSMVAVCLADGS 173 (434)
T ss_dssp EETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSS------------------CTTEEEEEETTSC
T ss_pred eccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCC------------------CCCEEEEEECCCe
Confidence 7889999999998764 11 1111 22346788999999995 2445558899999
Q ss_pred EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC-----cCceeeeeeec
Q psy15157 266 IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS-----MGQQFELTLTV 340 (344)
Q Consensus 266 i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 340 (344)
|++||++++..+.... .|. ..|.+++|+|+|++|++|+.||.|++||++ ++....+..+.. ......+.+.+
T Consensus 174 v~iwD~~~~~~~~~~~-~~~-~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 174 IAVLQVTETVKVCATL-PST-VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp EEEEEESSSEEEEEEE-CGG-GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred EEEEEcCCCcceeecc-CCC-CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 9999999987665544 333 469999999999999999999999999998 666677765532 22555666554
Q ss_pred c
Q psy15157 341 D 341 (344)
Q Consensus 341 ~ 341 (344)
+
T Consensus 251 ~ 251 (434)
T 2oit_A 251 T 251 (434)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-20 Score=157.43 Aligned_cols=203 Identities=15% Similarity=0.144 Sum_probs=146.1
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC-ccccccCCCCCCcCCCCCCceEEEecCC-cCCeEEEEEcCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR-MLAKSSMESSEPQNDQQGHPVIRTLYDH-IEEVTCLEFHPSA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~ 191 (344)
.+..|...|.+++|+|+|++|++++ ++.|++||+.+ . ........| ...+.+++|+|++
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~------------------~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP------------------SPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC------------------SCEECCCTTCCCBCSCCEECTTS
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC------------------CceEeccccccccccceEECCCC
Confidence 4567899999999999999999987 78999999964 2 223333344 4678899999999
Q ss_pred CEEEEEe--CCCcEEEEEc--CCCccccceeeeccccceEEEEEecCCCEEE-EEeCCCEEEEE----------------
Q psy15157 192 PILASGS--KDKTVKMFDY--SKSSVRKAHKTIQESTFVRCLSFHPCGDYMV-VGTDHFVLRLY---------------- 250 (344)
Q Consensus 192 ~~l~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~i~~~---------------- 250 (344)
+.|++++ .++...||.+ .++.. ........+.+++|+|++++++ ++..++.+.+|
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGTP----RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCCC----EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CEEEEEEeCCCCcceEEEEECCCCce----EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 9999988 3455666655 44332 1122333488899999999887 67778888776
Q ss_pred --------cCCCCEEEEEe-CCCcEEEEeCC-CCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----------Cc
Q psy15157 251 --------SSDGRIYCSGS-KDGDIKIWDGV-SSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----------SL 309 (344)
Q Consensus 251 --------~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----------g~ 309 (344)
+|+|++++.++ .++.+++|++. .+.....+.. +. ..+.++.|+|+|++|++++.+ +.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-SA-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-CS-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-CC-cccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 78999877666 58999999876 4445555542 32 468999999999999988765 56
Q ss_pred EEEEEcCCCeeEEE--eecCCCcCceeeeeeeccCC
Q psy15157 310 VKLWELSSARCLIA--YTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 310 i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 343 (344)
|++||+.+++.... +.+|... ...+.++++++
T Consensus 251 l~~~d~~~~~~~~~~~~~~~~~~--~~~~~~spdg~ 284 (297)
T 2ojh_A 251 VQLMDMDGGNVETLFDLFGGQGT--MNSPNWSPDGD 284 (297)
T ss_dssp EEEEETTSCSCEEEEEEEESTTT--SCSCCBCTTSS
T ss_pred EEEEecCCCCceeeeccCCCCcc--cccceECCCCC
Confidence 99999998876443 3344333 34455555553
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-19 Score=149.26 Aligned_cols=215 Identities=11% Similarity=0.097 Sum_probs=131.4
Q ss_pred eEEEEECCCCC---EEEEEeCCCeEEEEEcCCc---cccccCCCCC-------CcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 122 CRAGAFSIDGQ---LCATGSVDASIKILDVDRM---LAKSSMESSE-------PQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 122 v~~~~~s~~~~---~l~sg~~dg~v~iwd~~~~---~~~~~~~~~~-------~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
+.++.|-.-|. .+++++ ...|++|+..+. .........+ ...+..+.-++.-=.-+...|..++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 45555654333 566666 468999999764 2221111111 001111112222223345577888888
Q ss_pred CC----CCEEEEEeC--------------------CCcEEEEEcCC-CccccceeeeccccceEEEEEec---CCCEEEE
Q psy15157 189 PS----APILASGSK--------------------DKTVKMFDYSK-SSVRKAHKTIQESTFVRCLSFHP---CGDYMVV 240 (344)
Q Consensus 189 ~~----~~~l~s~~~--------------------dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~ 240 (344)
|+ ++.+++++. |+.|++|++.. ++... ....|...++.++|++ ++.+|++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~--s~~~~~~~v~~l~fs~~~g~~~~LaS 198 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKE--NQFLMPPEETILTFAEVQGMQEALLG 198 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEE--EEEECCCSSCEEEEEEEETSTTEEEE
T ss_pred CCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceee--eeccCCCceeeEEeeccCCCCceEEE
Confidence 88 777777653 77888888744 44332 2234666677788888 6789999
Q ss_pred EeCCCEEEEE--------------------------cCCCCEE------------EEEeCCCcEEEEeCCCCeEEeeec-
Q psy15157 241 GTDHFVLRLY--------------------------SSDGRIY------------CSGSKDGDIKIWDGVSSKCVATFS- 281 (344)
Q Consensus 241 ~~~~~~i~~~--------------------------~~~~~~l------------~~~~~dg~i~iwd~~~~~~~~~~~- 281 (344)
++.|++|++| +|+|.++ ++|+.|++|++||..+++.+..+.
T Consensus 199 gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 199 TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEE
T ss_pred ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 9999999998 2344443 567888999999999998776542
Q ss_pred ---ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 282 ---KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 282 ---~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+|.+ .+.+..+ ++.++++|+.|++|+|||+.+++++.++++|..... ..+.|++|+.
T Consensus 279 ~~p~Gh~~-~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vv-s~vafSPDG~ 339 (356)
T 2w18_A 279 CLPPGQAG-RFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHW-SFVKWSGTDS 339 (356)
T ss_dssp CCCTTCCC-CEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCC-CEEEECSSSS
T ss_pred eccCCCcc-eeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeE-EEEEECCCCC
Confidence 23432 2444444 488999999999999999999999999998865332 2356777764
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-19 Score=162.05 Aligned_cols=202 Identities=11% Similarity=0.068 Sum_probs=152.0
Q ss_pred eEEecCCCceEEEEECC--------------CCCEEEEEeCC------CeEEEEEcCCccccccCCCCCCcCCCCCCceE
Q psy15157 113 AYVTSHKSPCRAGAFSI--------------DGQLCATGSVD------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVI 172 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~--------------~~~~l~sg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (344)
..+.+|...++.+++++ .+..++.++.+ +.|++||++. ...
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-------------------~~~ 171 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-------------------YNQ 171 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-------------------CSC
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-------------------CCC
Confidence 45778988888887764 15566666654 7999999852 224
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEeCCC---cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEE-EEeCCCE--
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGSKDK---TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMV-VGTDHFV-- 246 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~-- 246 (344)
..+.+|...+.+++|+|+++.|++++.|+ .|++||+.+++.. ....+...+.+++|+|+|++|+ +++.++.
T Consensus 172 ~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 172 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLN 248 (415)
T ss_dssp EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCCCCEEEEEEecCCCce
Confidence 56677889999999999999999999885 9999999987653 2334566899999999999888 5555544
Q ss_pred EEEE----------------------cCCCCEEEEEeCC-C--cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 247 LRLY----------------------SSDGRIYCSGSKD-G--DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 247 i~~~----------------------~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
|.+| +|+|++|++++.+ + .|++||+.+++... +. .+ +..+.+++|+|+|++|
T Consensus 249 i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~-~~-~~~~~~~~~spdG~~l 325 (415)
T 2hqs_A 249 LYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-IT-WE-GSQNQDADVSSDGKFM 325 (415)
T ss_dssp EEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CC-CS-SSEEEEEEECTTSSEE
T ss_pred EEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Ee-cC-CCcccCeEECCCCCEE
Confidence 6655 7899988888764 4 68888998886433 32 22 2468899999999999
Q ss_pred EEEeCC---CcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 302 LSSGKD---SLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 302 ~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
++++.+ ..|++||+.+++.. .+..+. ......+++|+.
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~---~~~~~~~spdg~ 366 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGVQ-VLSSTF---LDETPSLAPNGT 366 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCEE-ECCCSS---SCEEEEECTTSS
T ss_pred EEEECcCCceEEEEEECCCCCEE-EecCCC---CcCCeEEcCCCC
Confidence 988764 58999999998774 455443 556677777764
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-18 Score=149.28 Aligned_cols=210 Identities=10% Similarity=0.061 Sum_probs=142.6
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCC-CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVD-ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..|...+.+++|+|+|+++++++.+ +.|++|+++.. ......+..+..+. .+.+++|+|+++.|
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD--------------DGALTFAAESALPG-SLTHISTDHQGQFV 98 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT--------------TCCEEEEEEEECSS-CCSEEEECTTSSEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCC--------------CCceeeccccccCC-CCcEEEEcCCCCEE
Confidence 4677889999999999998888886 99999998610 01122334444444 78899999999977
Q ss_pred EEEeC-CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------------
Q psy15157 195 ASGSK-DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------------- 250 (344)
Q Consensus 195 ~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------------- 250 (344)
++++. ++.|.+||+.++..............+.+++|+|+|+++++++ .++.+.+|
T Consensus 99 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 99 FVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred EEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC
Confidence 66654 8899999995332222233333445688899999999888876 66666665
Q ss_pred -------cCCCCEEEEE-eCCCcEEEEeCCC--CeE--Eeeec---ccC-CCccEEEEEEccCCCEEEE-EeCCCcEEEE
Q psy15157 251 -------SSDGRIYCSG-SKDGDIKIWDGVS--SKC--VATFS---KAH-DGAEISSLTFTRNGKYLLS-SGKDSLVKLW 313 (344)
Q Consensus 251 -------~~~~~~l~~~-~~dg~i~iwd~~~--~~~--~~~~~---~~~-~~~~v~~i~~~~~~~~l~s-~~~dg~i~vw 313 (344)
+|+|++++++ ..++.|.+||+.. ++. ...+. ..+ ....+.+++|+|+|++|++ +..++.|++|
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~ 258 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVF 258 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEE
Confidence 6777766544 4889999999953 432 22221 111 1235778999999998875 4579999999
Q ss_pred EcC--C--CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 314 ELS--S--ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 314 d~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|+. + .+.+..+..+.. ...+.++++++
T Consensus 259 d~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~ 289 (343)
T 1ri6_A 259 SVSEDGSVLSKEGFQPTETQ---PRGFNVDHSGK 289 (343)
T ss_dssp EECTTSCCEEEEEEEECSSS---CCCEEECTTSS
T ss_pred EEcCCCCceEEeeeecCCCc---cceEEECCCCC
Confidence 998 2 345555554433 34455555543
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-17 Score=152.17 Aligned_cols=200 Identities=13% Similarity=0.109 Sum_probs=147.6
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC----CCCEEEEE
Q psy15157 122 CRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP----SAPILASG 197 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~s~ 197 (344)
+.+++|+|+|++|++++.|++|++||+.. .+...+.++. +...+..++|+| ++++++++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~----------------~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWA----------------KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTS----------------SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcC----------------CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEE
Confidence 89999999999999999999999999931 1134455555 445679999999 99999888
Q ss_pred eC-CCcEEEEEcCCCccccceeeec---------cccceEEEEEecCCCEEEE-EeCCCEEEEE----------------
Q psy15157 198 SK-DKTVKMFDYSKSSVRKAHKTIQ---------ESTFVRCLSFHPCGDYMVV-GTDHFVLRLY---------------- 250 (344)
Q Consensus 198 ~~-dg~i~iwd~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~-~~~~~~i~~~---------------- 250 (344)
+. +++|.+||..+.+....+.... ....+..+.++|++..+++ ...++.|.+|
T Consensus 244 ~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~ 323 (543)
T 1nir_A 244 AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAA 323 (543)
T ss_dssp EEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECC
T ss_pred EccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccC
Confidence 74 8999999999887665554321 1236889999998766554 4556666554
Q ss_pred --------cCCCCEEEEE-eCCCcEEEEeCCCCeEEeeeccc---CCCccEEEEEEccC-CCEEEEEe-CCCcEEEEEcC
Q psy15157 251 --------SSDGRIYCSG-SKDGDIKIWDGVSSKCVATFSKA---HDGAEISSLTFTRN-GKYLLSSG-KDSLVKLWELS 316 (344)
Q Consensus 251 --------~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~i~~~~~-~~~l~s~~-~dg~i~vwd~~ 316 (344)
+|+|++++++ ..++.|.+||..+++++..+... |.+. ...+ ++|+ +.+++++. .|++|.+||+.
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~-g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~ 401 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR-GANF-VHPKYGPVWSTSHLGDGSISLIGTD 401 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT-CEEE-EETTTEEEEEEEBSSSSEEEEEECC
T ss_pred cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC-Cccc-CCCCCccEEEeccCCCceEEEEEeC
Confidence 7889977655 46889999999999988877632 3322 2233 4777 66666665 68999999999
Q ss_pred C-------CeeEEEeecCCCcCceeeeeeeccC
Q psy15157 317 S-------ARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 317 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
+ .+++.++.+++... ..+.+++++
T Consensus 402 ~~~~~~~~~~~v~~l~~~g~~~--~~v~~~pdg 432 (543)
T 1nir_A 402 PKNHPQYAWKKVAELQGQGGGS--LFIKTHPKS 432 (543)
T ss_dssp TTTCTTTBTSEEEEEECSCSCC--CCEECCTTC
T ss_pred CCCCchhcCeEEEEEEcCCCCc--eEEEcCCCC
Confidence 8 89999999887442 334445543
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-18 Score=163.93 Aligned_cols=201 Identities=11% Similarity=0.088 Sum_probs=147.4
Q ss_pred CCceEEEEECCCCCEEEEEeC-CC-----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-------------
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV-DA-----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI------------- 179 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~-dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------- 179 (344)
...|.+++|||||++|++++. |+ .|++||+.++... ..+..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~------------------~~~~~~~~~~~~~~~~~~~~ 97 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR------------------LLVDSKVVLPGTETLSDEEK 97 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE------------------EEECGGGTC-----------
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee------------------Eccchhhcccccccccchhh
Confidence 457999999999999999998 88 8999999754321 1121111
Q ss_pred -----------CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC---ccccceeeeccccceEEEEEecCCCEEEEEeCCC
Q psy15157 180 -----------EEVTCLEFHPSAPILASGSKDKTVKMFDYSKS---SVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245 (344)
Q Consensus 180 -----------~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 245 (344)
..|.+++|+|||+.|++++. +.|++||+.++ ... ....+...+.+++|+|+|++|+.++.+
T Consensus 98 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~---~l~~~~~~~~~~~~SPDG~~la~~~~~- 172 (741)
T 2ecf_A 98 ARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR---QLTHGEGFATDAKLSPKGGFVSFIRGR- 172 (741)
T ss_dssp ---------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC---BCCCSSSCEEEEEECTTSSEEEEEETT-
T ss_pred hhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE---EcccCCcccccccCCCCCCEEEEEeCC-
Confidence 33788999999999998886 99999999887 432 223455679999999999999887642
Q ss_pred EEE---------------------------------------EEcCCCCEEEEEeCCC----------------------
Q psy15157 246 VLR---------------------------------------LYSSDGRIYCSGSKDG---------------------- 264 (344)
Q Consensus 246 ~i~---------------------------------------~~~~~~~~l~~~~~dg---------------------- 264 (344)
.|. .|+|||++|++++.|+
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 333 3578899999888776
Q ss_pred -----------cEEEEeCCC-CeEEeeecccCCCccEEEEEEccCCCEEEEEeC-----CCcEEEEEcCCCeeEEEeecC
Q psy15157 265 -----------DIKIWDGVS-SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK-----DSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 265 -----------~i~iwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-----dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.|++||+.+ ++.............+.+++| |||++|++++. +..|++||+.++++...+..+
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcC
Confidence 789999988 776544332122356999999 99999987653 567999999999988777765
Q ss_pred CCcC--ceeeeeeeccCC
Q psy15157 328 GSMG--QQFELTLTVDAD 343 (344)
Q Consensus 328 ~~~~--~~~~~~~~~~~~ 343 (344)
...- ....+.|++|+.
T Consensus 332 ~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp CSSCCCCCSCCEECTTSC
T ss_pred CCCcCCcCCceEECCCCe
Confidence 4211 223455666653
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-17 Score=143.42 Aligned_cols=188 Identities=10% Similarity=0.109 Sum_probs=137.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCce-EEEecCCcCCeEEEEEcCCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPV-IRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~ 192 (344)
+..+...+ +++|+|+|+++++++. ++.|.+||..++ .. ...+..+.....+++|+|+++
T Consensus 36 ~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~s~dg~ 96 (331)
T 3u4y_A 36 ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE------------------PPKVVAIQEGQSSMADVDITPDDQ 96 (331)
T ss_dssp EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS------------------SCEEEEEEECSSCCCCEEECTTSS
T ss_pred EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC------------------ceeEEecccCCCCccceEECCCCC
Confidence 34455667 9999999996666655 899999998642 22 445555666665599999999
Q ss_pred EEEEEeCCC---cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCE-EEEE-----------------
Q psy15157 193 ILASGSKDK---TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFV-LRLY----------------- 250 (344)
Q Consensus 193 ~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~-i~~~----------------- 250 (344)
+++++..++ .|.+||+.+++....+ .......+++|+|+|++++++ ..++. +.+|
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 173 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTI---PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFIS 173 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEE---ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEEC
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEE---ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcccc
Confidence 888555553 8999999887654433 234457899999999876665 44455 6643
Q ss_pred ----------cCCCCEEE-EEeCCCcEEEEeCCCCeE---EeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEc
Q psy15157 251 ----------SSDGRIYC-SGSKDGDIKIWDGVSSKC---VATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWEL 315 (344)
Q Consensus 251 ----------~~~~~~l~-~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~ 315 (344)
+|+|++++ ++..++.|++||+.+++. +..+... ..+..++|+|+|++|++++ .++.|.+||+
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 78898554 455689999999998887 6666522 3578899999999776654 5788999999
Q ss_pred CCCee--EEEeecC
Q psy15157 316 SSARC--LIAYTGA 327 (344)
Q Consensus 316 ~~~~~--~~~~~~~ 327 (344)
.+++. +..+..+
T Consensus 251 ~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 251 LSGTLSFVKSFGHG 264 (331)
T ss_dssp TTTEEEEEEEEECC
T ss_pred CCCceeeecccccc
Confidence 99987 5555433
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.2e-17 Score=140.73 Aligned_cols=204 Identities=10% Similarity=0.070 Sum_probs=151.9
Q ss_pred cCCCceEEEEECCCCCEEEEEeC-------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSV-------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.....+..++|+|+++++++++. ++.|.+||..++ +....+.. ...+..++|+|
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~------------------~~~~~~~~-~~~~~~~~~s~ 98 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL------------------EVTQAIHN-DLKPFGATINN 98 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC------------------CEEEEEEE-SSCCCSEEEET
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC------------------eEEEEEec-CCCcceEEECC
Confidence 34467889999999998888774 568999998642 33333332 33467899999
Q ss_pred CCCE-EEEEeCCCcEEEEEcCCCccccceeeeccc-------cceEEEEEecCCCEEEEEe--CCCEEEEE---------
Q psy15157 190 SAPI-LASGSKDKTVKMFDYSKSSVRKAHKTIQES-------TFVRCLSFHPCGDYMVVGT--DHFVLRLY--------- 250 (344)
Q Consensus 190 ~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~--~~~~i~~~--------- 250 (344)
+++. ++++..++.|.+||..+++....+...... ..+.+++|+|+|++++++. .++.+.+|
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT 178 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE
T ss_pred CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE
Confidence 9995 455566899999999988765544332111 1268899999999888876 47778876
Q ss_pred --------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC--CCccEEEEEEccCCCEEEEEeC-CCcEEEE
Q psy15157 251 --------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH--DGAEISSLTFTRNGKYLLSSGK-DSLVKLW 313 (344)
Q Consensus 251 --------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~s~~~-dg~i~vw 313 (344)
+++|+++++++.++.|.+||..+++....+.... ....+.+++|+|+|+++++++. ++.|.+|
T Consensus 179 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 258 (353)
T 3vgz_A 179 AIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVV 258 (353)
T ss_dssp EECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEE
T ss_pred EecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEE
Confidence 7889999999999999999999999887765321 1235788999999998777664 5999999
Q ss_pred EcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 314 ELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|+.+++.+..+..+.. ..+.++++++
T Consensus 259 d~~~~~~~~~~~~~~~----~~~~~s~dg~ 284 (353)
T 3vgz_A 259 DTRNGNILAKVAAPES----LAVLFNPARN 284 (353)
T ss_dssp ETTTCCEEEEEECSSC----CCEEEETTTT
T ss_pred ECCCCcEEEEEEcCCC----ceEEECCCCC
Confidence 9999999888876442 3455555543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-16 Score=139.58 Aligned_cols=198 Identities=10% Similarity=0.075 Sum_probs=147.5
Q ss_pred CCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC---------CeEEEEEc
Q psy15157 119 KSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE---------EVTCLEFH 188 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~ 188 (344)
...+..++|+++|+++ ++...++.|.+||..++ +....+..+.. .+.+++|+
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~s 149 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG------------------EVKGRLVLDDRKRTEEVRPLQPRELVAD 149 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC------------------CEEEEEESCCCCCCSSCCCCEEEEEEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC------------------eeEEEEecCCCccccccCCCCCceEEEC
Confidence 4457889999999955 45556799999998653 23333333322 26889999
Q ss_pred CCCCEEEEEe--CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------
Q psy15157 189 PSAPILASGS--KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------- 250 (344)
Q Consensus 189 ~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------- 250 (344)
|+++.+++++ .++.|.+||..+++....+. .....+.+++|+|+|+++++++.++.+.+|
T Consensus 150 ~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 227 (353)
T 3vgz_A 150 DATNTVYISGIGKESVIWVVDGGNIKLKTAIQ--NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDD 227 (353)
T ss_dssp TTTTEEEEEEESSSCEEEEEETTTTEEEEEEC--CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS
T ss_pred CCCCEEEEEecCCCceEEEEcCCCCceEEEec--CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC
Confidence 9999776665 47899999998876544332 134457789999999999999988888876
Q ss_pred -----------cCCCCEEEEEeC-CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy15157 251 -----------SSDGRIYCSGSK-DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSS 317 (344)
Q Consensus 251 -----------~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~ 317 (344)
+|+|+++++++. ++.|.+||..+++.+..+.... ...++|+|+|+++++++ .++.|.+||+.+
T Consensus 228 ~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 228 GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE----SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS----CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC----CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 567886666654 4899999999999887776332 25689999999766655 789999999999
Q ss_pred CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 318 ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
++.+..+..+. ....+.+++|++
T Consensus 304 ~~~~~~~~~~~---~~~~~~~s~dg~ 326 (353)
T 3vgz_A 304 YKVVKTFDTPT---HPNSLALSADGK 326 (353)
T ss_dssp TEEEEEEECCS---EEEEEEECTTSC
T ss_pred CeEEEEEecCC---CCCeEEEcCCCC
Confidence 99998887654 335566666654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-17 Score=143.26 Aligned_cols=182 Identities=12% Similarity=0.075 Sum_probs=137.4
Q ss_pred ceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-C-----cCCeEEEEEcCCCCE
Q psy15157 121 PCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-H-----IEEVTCLEFHPSAPI 193 (344)
Q Consensus 121 ~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~ 193 (344)
.+..++|+|+|+++ +++..++.|.+||+.++ +....+.. + ...+.+++|+|++++
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~------------------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 105 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC------------------KNTFHANLSSVPGEVGRSMYSFAISPDGKE 105 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT------------------EEEEEEESCCSTTEEEECSSCEEECTTSSE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC------------------cEEEEEEcccccccccccccceEECCCCCE
Confidence 57899999999865 45567899999998643 22333321 2 234778999999999
Q ss_pred EEEEeCC------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------
Q psy15157 194 LASGSKD------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 194 l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------- 250 (344)
|++++.+ +.|.+||+.+++.........+...+.+++|+|+|+ +++++.+ +.+|
T Consensus 106 l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~~--i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 106 VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGPD--IYKMDVKTGKYTVAL 182 (349)
T ss_dssp EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESSS--EEEECTTTCCEEEEE
T ss_pred EEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccCc--EEEEeCCCCceeccc
Confidence 9888865 999999998865444333334445688899999998 5554332 4443
Q ss_pred --------------------------------------------------------------------------------
Q psy15157 251 -------------------------------------------------------------------------------- 250 (344)
Q Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (349)
T 1jmx_B 183 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLR 262 (349)
T ss_dssp CSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE
T ss_pred cccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEe
Confidence
Q ss_pred cC-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 251 SS-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 251 ~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+| +|++++++ ++.|.+||+.+++.+..+...+ .+.+++|+|+|++|++++.++.|++||+.+++.+..++.++
T Consensus 263 sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~ 336 (349)
T 1jmx_B 263 SPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 336 (349)
T ss_dssp CSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred cCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC---CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecCC
Confidence 25 77777776 7899999999999887775332 36789999999999988889999999999999999987663
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=9.9e-17 Score=139.12 Aligned_cols=188 Identities=15% Similarity=0.208 Sum_probs=132.1
Q ss_pred CceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
..+.+++|+|+|+++++++. ++.|.+||+..+ ........+..+ ..+.+++|+|+++.+++++
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~---------------~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG---------------LPVGVVDVVEGL-DGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETT---------------EEEEEEEEECCC-TTBCCCEECTTSSEEEEEE
T ss_pred CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC---------------ccccccccccCC-CCceEEEECCCCCEEEEec
Confidence 38899999999998876665 889999998411 011233344333 4588999999999877777
Q ss_pred -CCCcEEEEEcCC-Cccccce--ee-eccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------------
Q psy15157 199 -KDKTVKMFDYSK-SSVRKAH--KT-IQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY---------------------- 250 (344)
Q Consensus 199 -~dg~i~iwd~~~-~~~~~~~--~~-~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~---------------------- 250 (344)
.++.|++||+.+ ++..... .. ......+.+++|+|+|+++++++ .++.+.+|
T Consensus 148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (343)
T 1ri6_A 148 LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENF 227 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTC
T ss_pred CCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccc
Confidence 899999999987 5432211 11 12344688899999999877665 66777666
Q ss_pred -----------cCCCCEEE-EEeCCCcEEEEeCC--C--CeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEE
Q psy15157 251 -----------SSDGRIYC-SGSKDGDIKIWDGV--S--SKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLW 313 (344)
Q Consensus 251 -----------~~~~~~l~-~~~~dg~i~iwd~~--~--~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vw 313 (344)
+|+|++++ ++..++.|.+||+. + .+.+..+.. + ..+.+++|+|+|++|++++ .++.|.+|
T Consensus 228 ~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~--~~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 228 SDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT-E--TQPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp CSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-S--SSCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred cccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC-C--CccceEEECCCCCEEEEecCCCCeEEEE
Confidence 56677766 45578999999998 2 344444432 2 2378899999999988887 68999999
Q ss_pred Ec--CCCe--eEEEeec
Q psy15157 314 EL--SSAR--CLIAYTG 326 (344)
Q Consensus 314 d~--~~~~--~~~~~~~ 326 (344)
++ .+++ .+..+..
T Consensus 305 ~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 305 EIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp EEETTTTEEEEEEEEEC
T ss_pred EEcCCCceeeEcccccc
Confidence 54 4664 3444544
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=165.70 Aligned_cols=204 Identities=8% Similarity=0.061 Sum_probs=144.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC---CeEEEEEcCCCCEEEEE
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE---EVTCLEFHPSAPILASG 197 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~ 197 (344)
.+.+++|+|||+++++ +.||+|++||+.++ .....+..|.. .|.+++|+|||++|+++
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g------------------~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 78 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETN------------------TSTVLIEGKKIESLRAIRYEISPDREYALFS 78 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGC------------------CCEEEECTTTTTTTTCSEEEECTTSSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCC------------------cEEEEeccccccccccceEEECCCCCEEEEE
Confidence 4677899999998776 78999999999642 33445555554 48999999999999998
Q ss_pred eCC---------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC------------------C-----
Q psy15157 198 SKD---------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH------------------F----- 245 (344)
Q Consensus 198 ~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------------------~----- 245 (344)
+.+ +.|++||+.+++.........+...+..++|+|+|++|+.++.. +
T Consensus 79 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~ 158 (723)
T 1xfd_A 79 YNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVI 158 (723)
T ss_dssp ESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTE
T ss_pred ecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCce
Confidence 875 78889999987652222112233347789999999998877531 0
Q ss_pred -----------------EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCC
Q psy15157 246 -----------------VLRLYSSDGRIYCSGSKDG----------------------------------DIKIWDGVSS 274 (344)
Q Consensus 246 -----------------~i~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~ 274 (344)
.-..|+|+|+.|++++.|+ .|++||+.++
T Consensus 159 ~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp EEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred ECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 1244688999999887653 7999999988
Q ss_pred eEEeeecccC----CCccEEEEEEccCCCEEEEEeC----CCcEEEEEcCCCeeEEEeecCCCc-Cc--eeeeeeeccCC
Q psy15157 275 KCVATFSKAH----DGAEISSLTFTRNGKYLLSSGK----DSLVKLWELSSARCLIAYTGAGSM-GQ--QFELTLTVDAD 343 (344)
Q Consensus 275 ~~~~~~~~~~----~~~~v~~i~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~ 343 (344)
+....+.... ....+.+++|+|||++|++.+. +..|++||+.++++...+..+... .. .....|++|++
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~ 318 (723)
T 1xfd_A 239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR 318 (723)
T ss_dssp CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC
T ss_pred ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCC
Confidence 7644554221 1346899999999999877643 357999999999887776543211 11 12456666654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-16 Score=138.89 Aligned_cols=190 Identities=13% Similarity=0.194 Sum_probs=131.7
Q ss_pred EecCCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec---------CCcCCeEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY---------DHIEEVTC 184 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~ 184 (344)
+..|...+..++|+|+|++|++++ .++.|.+|++... .....+..+. .+...+.+
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~---------------g~~~~~~~~~~~~~~p~~~~~~~~~~~ 145 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD---------------GALTLTDTVQHSGHGPRPEQDGSHIHY 145 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT---------------SCEEEEEEEECCCCCSSTTCSSCCEEE
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC---------------CCeeecceeecCCCCCCccccCCCceE
Confidence 345778899999999999888887 6899999999521 0011111111 12345889
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcC-CCccccceee-eccccceEEEEEecCCCEEEEE-eCCCEEEEE-----------
Q psy15157 185 LEFHPSAPILASGSKDKTVKMFDYS-KSSVRKAHKT-IQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY----------- 250 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~----------- 250 (344)
++|+|+++++++...++.|.+||+. +++....... ......+..++|+|+|++++++ ..++.+.+|
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 9999999977777778999999998 4433222111 1123357889999999977765 345555444
Q ss_pred ----------------------cCCCCEE-EEEeCCCcEEEEeCCCC---eEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 251 ----------------------SSDGRIY-CSGSKDGDIKIWDGVSS---KCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 ----------------------~~~~~~l-~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+|+|+++ ++...++.|.+||+... +.+..+.. + +..+..++|+|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~-~~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST-E-GDFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC-S-SSCCCEEEECTTSSEEEEE
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec-C-CCCcCeEEECCCCCEEEEE
Confidence 7888876 55667899999998732 44444432 2 2357899999999998888
Q ss_pred eC-CCcEEEE--EcCCCeeE
Q psy15157 305 GK-DSLVKLW--ELSSARCL 321 (344)
Q Consensus 305 ~~-dg~i~vw--d~~~~~~~ 321 (344)
+. ++.|.+| |..+|+..
T Consensus 304 ~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 304 NQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ETTTTEEEEEEECTTTCCEE
T ss_pred EcCCCcEEEEEEeCCCCeEE
Confidence 75 4899999 55566654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.9e-17 Score=141.31 Aligned_cols=209 Identities=11% Similarity=0.139 Sum_probs=139.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+...+..++|+|+|+ +++++. ++.|.+|++.++ ....+..+..+...+..++|+|+++
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g----------------~~~~~~~~~~~~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ----------------TAHKLNTVVAPGTPPAYVAVDEARQ 98 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT----------------EEEEEEEEEEESCCCSEEEEETTTT
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC----------------cEEEeeeeecCCCCCEEEEECCCCC
Confidence 45667888999999999 554443 689999998532 1223444455677888999999999
Q ss_pred EEEEEe-CCCcEEEEEcCCCccccceeeecc----------ccceEEEEEecCCCEEEEEeCCCEEEEE-----------
Q psy15157 193 ILASGS-KDKTVKMFDYSKSSVRKAHKTIQE----------STFVRCLSFHPCGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 193 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------- 250 (344)
+|++++ .++.|.+||+.............. ...+.+++|+|+|+.+++...++.+.+|
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 888877 689999999963221111211111 1247889999999955555556667665
Q ss_pred ----------------cCCCCEEEE-EeCCCcEEEEeCCC--CeE--EeeecccCC----CccEEEEEEccCCCEEE-EE
Q psy15157 251 ----------------SSDGRIYCS-GSKDGDIKIWDGVS--SKC--VATFSKAHD----GAEISSLTFTRNGKYLL-SS 304 (344)
Q Consensus 251 ----------------~~~~~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~~~~----~~~v~~i~~~~~~~~l~-s~ 304 (344)
+|+|+++++ +..++.|.+|++.. ++. +..+..... ...+..++|+|||++|+ ++
T Consensus 179 ~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 179 SVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred eeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 788885555 56788999999774 543 222221111 13588999999999885 55
Q ss_pred eCCCcEEEEEcCC---CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 305 GKDSLVKLWELSS---ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 305 ~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
..++.|.+|++.. .+.+..+..++.. ...+.+++|+.
T Consensus 259 ~~~~~v~v~~~~~~g~~~~~~~~~~~~~~--~~~~~~spdg~ 298 (347)
T 3hfq_A 259 RGYNTLAVFAVTADGHLTLIQQISTEGDF--PRDFDLDPTEA 298 (347)
T ss_dssp ETTTEEEEEEECGGGCEEEEEEEECSSSC--CCEEEECTTSS
T ss_pred CCCCEEEEEEECCCCcEEEeEEEecCCCC--cCeEEECCCCC
Confidence 6689999999973 2455555554432 23455666654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-17 Score=151.37 Aligned_cols=205 Identities=12% Similarity=0.151 Sum_probs=152.8
Q ss_pred CCCceEEEEECC----CCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC----------C-cCC
Q psy15157 118 HKSPCRAGAFSI----DGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD----------H-IEE 181 (344)
Q Consensus 118 h~~~v~~~~~s~----~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------h-~~~ 181 (344)
+...++.++|+| +|+++++++. +++|.|||..+. +++.++.. | ...
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~------------------~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL------------------EPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC------------------CEEEEEECCEECSSSCCEESCCC
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc------------------ccceeecccCcccCccccccCCc
Confidence 456689999999 9999999885 899999998653 33333322 2 237
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE---------
Q psy15157 182 VTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY--------- 250 (344)
Q Consensus 182 v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~--------- 250 (344)
+..+.++|++. ++++...++.|.+||+.+.+.... ....+...+..+.|+|+|+++++++ .++.|.+|
T Consensus 282 v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~-~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV-TSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEE-EEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEEEEECCCCeEEEEEecCCCccee-EEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 89999999776 567778899999999988654432 2233456688899999999887665 57888888
Q ss_pred -----------------cCC-CCEEEEEe-CCCcEEEEeCCC-------CeEEeeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 251 -----------------SSD-GRIYCSGS-KDGDIKIWDGVS-------SKCVATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 -----------------~~~-~~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+|+ +..+++++ .|++|.+||..+ .++++++.. +. ..+..++++|+|++|+++
T Consensus 361 ~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~-~g-~~~~~v~~~pdg~~l~v~ 438 (543)
T 1nir_A 361 LVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG-QG-GGSLFIKTHPKSSHLYVD 438 (543)
T ss_dssp EEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC-SC-SCCCCEECCTTCCEEEEC
T ss_pred eeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc-CC-CCceEEEcCCCCCcEEEe
Confidence 244 55566665 689999999998 888888874 33 346789999999999998
Q ss_pred e-------CCCcEEEEEcCCCeeE-EEeec------CCCcCceeeeeeeccCC
Q psy15157 305 G-------KDSLVKLWELSSARCL-IAYTG------AGSMGQQFELTLTVDAD 343 (344)
Q Consensus 305 ~-------~dg~i~vwd~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~ 343 (344)
+ .+++|.+||+.+++.. ..+.- ..+......+.|+++++
T Consensus 439 ~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 439 TTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp CTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred cCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC
Confidence 7 2789999999999877 44421 12245666777777764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.7e-17 Score=154.37 Aligned_cols=220 Identities=13% Similarity=0.108 Sum_probs=144.3
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC-----ccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR-----MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
..+..|...+.+++|||||++|+++ .|+.|++||+.+ +............ ...+.. ....+...+.+++|
T Consensus 114 ~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~--~~~ee~~~~~~~~~ 188 (706)
T 2z3z_A 114 TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTET--LVYGQA--VHQREFGIEKGTFW 188 (706)
T ss_dssp EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTT--EEESSC--CGGGCTTCCCSEEE
T ss_pred EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCC--eEcccc--hhhhhcCCCceEEE
Confidence 3455677889999999999999995 689999999975 3221100000000 000000 11112233588999
Q ss_pred cCCCCEEEEEe---------------------------------CCCcEEEEEcCCCccccceeeeccccceEEEEEecC
Q psy15157 188 HPSAPILASGS---------------------------------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234 (344)
Q Consensus 188 ~~~~~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 234 (344)
+|||+.|++++ .+..|++||+.+++.........+...+.+++|+|+
T Consensus 189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 268 (706)
T 2z3z_A 189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD 268 (706)
T ss_dssp CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC
Confidence 99999999887 447799999988764333222235567899999999
Q ss_pred CCEEEEEeCCC-----EEEE----------------------------EcC--CCCEEEEEeCCCcEEEEeCC-CCeEEe
Q psy15157 235 GDYMVVGTDHF-----VLRL----------------------------YSS--DGRIYCSGSKDGDIKIWDGV-SSKCVA 278 (344)
Q Consensus 235 ~~~l~~~~~~~-----~i~~----------------------------~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~ 278 (344)
|++|++++.++ .+.+ |+| +|+++++++.|+.+++|++. ++..+.
T Consensus 269 g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~ 348 (706)
T 2z3z_A 269 ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIR 348 (706)
T ss_dssp SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEE
T ss_pred CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEE
Confidence 99998866443 3333 477 99999999999999999876 566666
Q ss_pred eecccCCCccEEE-EEEccCCCEEEEEe-CCC----cEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 279 TFSKAHDGAEISS-LTFTRNGKYLLSSG-KDS----LVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 279 ~~~~~~~~~~v~~-i~~~~~~~~l~s~~-~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+.. +. ..+.. ++|+|+|+.|+.++ .++ .|+.||+.+++ +..+... .....+.+++|++
T Consensus 349 ~l~~-~~-~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~---~~~~~~~~spdg~ 413 (706)
T 2z3z_A 349 QVTK-GE-WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPE---SGMHRTQLSPDGS 413 (706)
T ss_dssp ECCC-SS-SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCS---SSEEEEEECTTSS
T ss_pred ecCC-CC-eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCC---CceEEEEECCCCC
Confidence 6653 32 34666 79999999876654 444 67778887765 3444322 1234566666653
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=143.57 Aligned_cols=179 Identities=9% Similarity=0.031 Sum_probs=132.2
Q ss_pred ceEEEEECCCCCEEEEEe------------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc
Q psy15157 121 PCRAGAFSIDGQLCATGS------------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH 188 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 188 (344)
.+.+++|+|+|+++++++ .++.|.+||+.++ +....+.. ...+.+++|+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~------------------~~~~~~~~-~~~~~~~~~s 143 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL------------------SRRKAFEA-PRQITMLAWA 143 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT------------------EEEEEEEC-CSSCCCEEEC
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC------------------cEEEEEeC-CCCcceeEEC
Confidence 678899999999988886 5799999998642 23333332 3457789999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-CE---------------------
Q psy15157 189 PSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-FV--------------------- 246 (344)
Q Consensus 189 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~--------------------- 246 (344)
|++++|+++ ++.|.+||+.+++....+........ +.|+|+|.++++.... +.
T Consensus 144 ~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (337)
T 1pby_B 144 RDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218 (337)
T ss_dssp TTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEE
T ss_pred CCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccc
Confidence 999988777 68999999988765433322111112 2566666644332211 10
Q ss_pred --------------------------EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE
Q psy15157 247 --------------------------LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300 (344)
Q Consensus 247 --------------------------i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 300 (344)
-..|+|+|++++++ ++.|++||+.+++.+..+... ..+.+++|+|+|++
T Consensus 219 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 219 TGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP---HSYYSVNVSTDGST 293 (337)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS---SCCCEEEECTTSCE
T ss_pred cceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC---CceeeEEECCCCCE
Confidence 13468899998888 789999999999888777533 24789999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 301 LLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 301 l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
|++++.++.|++||+.+++.+..+..+.
T Consensus 294 l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 294 VWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred EEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 9999999999999999999999987653
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.5e-17 Score=136.60 Aligned_cols=182 Identities=14% Similarity=0.257 Sum_probs=131.6
Q ss_pred EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-Cccc
Q psy15157 136 TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK-SSVR 214 (344)
Q Consensus 136 sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~ 214 (344)
+++.|+.|++||+.++ . ...+..|...|.+++|+|++++|++++ ++.|++||+.+ ++..
T Consensus 17 ~~~~~~~i~~~d~~~~------------------~-~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR------------------K-MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp -CCCCEEEEEEETTTT------------------E-EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE
T ss_pred CCCcceeEEEEeCCCC------------------c-eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce
Confidence 4567899999998632 2 334556888999999999999999877 78999999988 6544
Q ss_pred cceeeeccccceEEEEEecCCCEEEEEe--CCCEEEEE-----------------------cCCCCEEE-EEeCCCcEEE
Q psy15157 215 KAHKTIQESTFVRCLSFHPCGDYMVVGT--DHFVLRLY-----------------------SSDGRIYC-SGSKDGDIKI 268 (344)
Q Consensus 215 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~~-----------------------~~~~~~l~-~~~~dg~i~i 268 (344)
.... ..+...+.+++|+|+|++++++. .++...+| +|+++.++ +++.++.+++
T Consensus 77 ~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l 155 (297)
T 2ojh_A 77 KVDT-GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDI 155 (297)
T ss_dssp ECCC-TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEE
T ss_pred Eecc-ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEE
Confidence 3221 12235688899999999999988 33344443 78999877 7888999999
Q ss_pred EeC--CCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcC-CCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 269 WDG--VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELS-SARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 269 wd~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|++ .+++. ..+. .+. ..+.+++|+|+|++|+.++ .++.+++|++. .+..+..+..+.. ....+.++++++
T Consensus 156 ~~~~~~~~~~-~~~~-~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~ 229 (297)
T 2ojh_A 156 YSMDIDSGVE-TRLT-HGE-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY--GDWFPHPSPSGD 229 (297)
T ss_dssp EEEETTTCCE-EECC-CSS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE--EEEEEEECTTSS
T ss_pred EEEECCCCcc-eEcc-cCC-CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc--ccCCeEECCCCC
Confidence 985 34443 3333 232 4689999999999888766 58999999987 5666677766542 344455666653
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.5e-16 Score=135.33 Aligned_cols=194 Identities=9% Similarity=0.048 Sum_probs=139.1
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-CCeEEEEEcCCCCEE-EEEeCCC
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-EEVTCLEFHPSAPIL-ASGSKDK 201 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l-~s~~~dg 201 (344)
.+++++++.++++++.++.|++||..+ .+....+..+. ..+..++|+|+++.+ +++..++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~ 65 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVAS------------------DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 65 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTT------------------TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCC------------------CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCC
Confidence 456788899999999999999999864 23344444332 256789999999855 5666789
Q ss_pred cEEEEEcCCCccccceeeecc----ccceEEEEEecCCCEEEEEeCC------------CEEEEE---------------
Q psy15157 202 TVKMFDYSKSSVRKAHKTIQE----STFVRCLSFHPCGDYMVVGTDH------------FVLRLY--------------- 250 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~------------~~i~~~--------------- 250 (344)
.|.+||+.+++....+..... ...+..++|+|+|+++++++.+ +.+.+|
T Consensus 66 ~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 145 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 145 (349)
T ss_dssp EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE
T ss_pred cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc
Confidence 999999988765443332111 2336789999999999998865 788877
Q ss_pred ----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC-----------------------------------
Q psy15157 251 ----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD----------------------------------- 285 (344)
Q Consensus 251 ----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----------------------------------- 285 (344)
+++|+ +++++. .|.+||..+++.+..+.....
T Consensus 146 ~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 146 MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDD 222 (349)
T ss_dssp CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCC
Confidence 67888 445443 499999999887765542210
Q ss_pred -------------------------------CccEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCce
Q psy15157 286 -------------------------------GAEISSLTFTR-NGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333 (344)
Q Consensus 286 -------------------------------~~~v~~i~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 333 (344)
+..+.+++|+| +|++++++ ++.|++||+.+++.+..+..... .
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~---~ 297 (349)
T 1jmx_B 223 KQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHT---Y 297 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSC---C
T ss_pred cCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCC---c
Confidence 01345677889 99999988 88999999999999888875432 2
Q ss_pred eeeeeeccCC
Q psy15157 334 FELTLTVDAD 343 (344)
Q Consensus 334 ~~~~~~~~~~ 343 (344)
..+.++++++
T Consensus 298 ~~~~~s~dg~ 307 (349)
T 1jmx_B 298 YCVAFDKKGD 307 (349)
T ss_dssp CEEEECSSSS
T ss_pred cceEECCCCC
Confidence 3456666543
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-16 Score=150.81 Aligned_cols=204 Identities=11% Similarity=0.127 Sum_probs=142.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC-------------
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE------------- 180 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------- 180 (344)
.+..|...+.+++|||||++|++++ ++.|++||+.++.. ......+..
T Consensus 146 ~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~------------------~~~~~~~~~~~~~g~~~~v~~~ 206 (741)
T 2ecf_A 146 QLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ------------------MQLTADGSTTIGNGIAEFVADE 206 (741)
T ss_dssp BCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE------------------EECCCCCCSSEEESCCCHHHHH
T ss_pred EcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE------------------EEeccCCccceeccccceeeee
Confidence 3567888999999999999999987 56899999975322 111112221
Q ss_pred ---CeEEEEEcCCCCEEEEEeCCC---------------------------------cEEEEEcCC-Cccccceeeeccc
Q psy15157 181 ---EVTCLEFHPSAPILASGSKDK---------------------------------TVKMFDYSK-SSVRKAHKTIQES 223 (344)
Q Consensus 181 ---~v~~~~~~~~~~~l~s~~~dg---------------------------------~i~iwd~~~-~~~~~~~~~~~~~ 223 (344)
.+.+++|+|||+.|++++.|+ .|++||+.+ ++.........+.
T Consensus 207 ~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 286 (741)
T 2ecf_A 207 EMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQD 286 (741)
T ss_dssp HSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSS
T ss_pred ccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcc
Confidence 247899999999999888776 789999988 7543222111356
Q ss_pred cceEEEEEecCCCEEEEEeC-----CCEEEE---------------------------EcCCCCEEEEEeCCCcEEEEeC
Q psy15157 224 TFVRCLSFHPCGDYMVVGTD-----HFVLRL---------------------------YSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 224 ~~v~~~~~~~~~~~l~~~~~-----~~~i~~---------------------------~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
..+..++| |+|++|+++.. +..+.+ |+|+|+++++++.||.++||.+
T Consensus 287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence 77899999 99999987653 233333 4788999999999998888866
Q ss_pred C-CCeEEeeecccCCCccEEEE-EEccCCCEEEE-EeCCC--cEEEEEcCC-CeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 272 V-SSKCVATFSKAHDGAEISSL-TFTRNGKYLLS-SGKDS--LVKLWELSS-ARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 272 ~-~~~~~~~~~~~~~~~~v~~i-~~~~~~~~l~s-~~~dg--~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
. .++ ...+..+ . ..+.++ .|+|+|+.|+. ++.++ .++||++.. +..+..+.+.. ....+.+++|++
T Consensus 366 ~~~~~-~~~l~~~-~-~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~---~~~~~~~spdg~ 437 (741)
T 2ecf_A 366 DSKGK-AAALTHG-N-WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAP---GMHSASFARNAS 437 (741)
T ss_dssp CSSSC-EEESCCS-S-SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSC---SEEEEEECTTSS
T ss_pred cCCCC-eeeeeec-c-eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCC---CceEEEECCCCC
Confidence 5 344 5555433 3 357777 59999998754 55555 899999875 66566666522 234666676654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-16 Score=151.14 Aligned_cols=199 Identities=17% Similarity=0.188 Sum_probs=140.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|.+++|||| +.++.+ .++.|++||+.++ ....+..+...+.+++|+|+|+.|+++ .
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~-------------------~~~~l~~~~~~~~~~~~SpdG~~la~~-~ 139 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR-------------------KVTYLFDTNEETASLDFSPVGDRVAYV-R 139 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT-------------------EEEEEECCTTCCTTCEECTTSSEEEEE-E
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC-------------------ceEEccCCcccccCCcCCCCCCEEEEE-E
Confidence 57999999999 655555 3599999998642 223444566778899999999999885 6
Q ss_pred CCcEEEEEcCC-----Cccccceeeeccc-------------cceEEEEEecCCCEEEEEe-------------------
Q psy15157 200 DKTVKMFDYSK-----SSVRKAHKTIQES-------------TFVRCLSFHPCGDYMVVGT------------------- 242 (344)
Q Consensus 200 dg~i~iwd~~~-----~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~~------------------- 242 (344)
|+.|++||+.+ ++....... ... ..+.++.|+|+|++|++++
T Consensus 140 ~~~i~v~~~~~~~~~~g~~~~~~~~-~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~ 218 (706)
T 2z3z_A 140 NHNLYIARGGKLGEGMSRAIAVTID-GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEA 218 (706)
T ss_dssp TTEEEEEECBCTTSCCCCCEESCSC-CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSC
T ss_pred CCeEEEEecCcccccCCCcEEeccC-CCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 89999999988 654332211 111 1147899999999999887
Q ss_pred --------------CCCEEEEE-------------------------cCCCCEEEEEeCCC-----cEEEEeCCCCeEEe
Q psy15157 243 --------------DHFVLRLY-------------------------SSDGRIYCSGSKDG-----DIKIWDGVSSKCVA 278 (344)
Q Consensus 243 --------------~~~~i~~~-------------------------~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~ 278 (344)
.+..+.+| +|+|+.+++++.++ .|++||..+++...
T Consensus 219 ~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 219 ESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp EEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE
T ss_pred ceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee
Confidence 33445554 78999999888776 89999999984333
Q ss_pred eecccCCCc---cEEEEEEcc--CCCEEEEEeCCCcEEEEEcC-CCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 279 TFSKAHDGA---EISSLTFTR--NGKYLLSSGKDSLVKLWELS-SARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 279 ~~~~~~~~~---~v~~i~~~~--~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.+....... .+.++.|+| ||++|++++.|+.++||++. +++.+..+..+...... .+.+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~-~~~~spdg 367 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTN-FAGFDPKG 367 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEE-EEEECTTS
T ss_pred EEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEe-eeEEcCCC
Confidence 332122111 246789999 99999999999999999887 67777777665322111 14555554
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-15 Score=131.76 Aligned_cols=187 Identities=11% Similarity=0.115 Sum_probs=135.2
Q ss_pred CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcC-CeEEEEEcCCCCEE-EEEeCCCcEEEEEc
Q psy15157 132 QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIE-EVTCLEFHPSAPIL-ASGSKDKTVKMFDY 208 (344)
Q Consensus 132 ~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~l-~s~~~dg~i~iwd~ 208 (344)
+++++++.++.|.+||..+ .+....+. ++.. .+..++|+|+++.+ ++++.++.|.+||+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK------------------MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63 (337)
T ss_dssp EEEEEEETTTEEEEEETTT------------------TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cEEEEcCCCCeEEEEECCC------------------CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 4789999999999999864 23344443 2222 47889999999755 56666899999999
Q ss_pred CCCccccceeeec---cccceEEEEEecCCCEEEEEe------------CCCEEEEE----------------------c
Q psy15157 209 SKSSVRKAHKTIQ---ESTFVRCLSFHPCGDYMVVGT------------DHFVLRLY----------------------S 251 (344)
Q Consensus 209 ~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~------------~~~~i~~~----------------------~ 251 (344)
.+++....+.... +...+.+++|+|+|++++++. .++.+.+| +
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s 143 (337)
T 1pby_B 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWA 143 (337)
T ss_dssp TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEEC
T ss_pred CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEEC
Confidence 8886554443221 112567799999999999886 56888887 6
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC--C--------------------------------------------
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH--D-------------------------------------------- 285 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~-------------------------------------------- 285 (344)
|+|++++++ ++.|++||+.+++....+.... .
T Consensus 144 ~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 144 RDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 888877777 6889999999887765443211 0
Q ss_pred ------------------CccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 286 ------------------GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 286 ------------------~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
...+.+++|+|+|++|+++ ++.|++||+.+++.+..+..+.. ...+.++++++
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~s~dg~ 292 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHS---YYSVNVSTDGS 292 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSC---CCEEEECTTSC
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCc---eeeEEECCCCC
Confidence 0124568999999999988 79999999999999888875432 24455665543
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-15 Score=129.82 Aligned_cols=194 Identities=11% Similarity=0.086 Sum_probs=132.8
Q ss_pred EECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC-CCcE
Q psy15157 126 AFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK-DKTV 203 (344)
Q Consensus 126 ~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i 203 (344)
.|.++++ .+++++.++.|.+||..+ .+....+..+...+ +++|+|+++.+++++. ++.|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~------------------~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i 64 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDT------------------LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTL 64 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTT------------------CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcc------------------cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeE
Confidence 4555444 578888999999999864 33444555555666 9999999996665555 8999
Q ss_pred EEEEcCCCcc-ccceeeeccccceEEEEEecCCCEEEEEeCCC---EEEEE----------------------cCCCCEE
Q psy15157 204 KMFDYSKSSV-RKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF---VLRLY----------------------SSDGRIY 257 (344)
Q Consensus 204 ~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~i~~~----------------------~~~~~~l 257 (344)
.+||+.+++. .... ..+..+..+++|+|+|++++++..++ .+.+| +|+|+++
T Consensus 65 ~~~d~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l 142 (331)
T 3u4y_A 65 VQIETQLEPPKVVAI--QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGL 142 (331)
T ss_dssp EEEECSSSSCEEEEE--EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCE
T ss_pred EEEECCCCceeEEec--ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEE
Confidence 9999998765 3222 22334444499999999999655553 88887 7888754
Q ss_pred -EEEeCCCc-EEEEeCCCCeEEeee--cccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCee---EEEeecCCC
Q psy15157 258 -CSGSKDGD-IKIWDGVSSKCVATF--SKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSSARC---LIAYTGAGS 329 (344)
Q Consensus 258 -~~~~~dg~-i~iwd~~~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~~~~---~~~~~~~~~ 329 (344)
+++..++. |.+|++.....+... .....+..+..++|+|+|++++++ ..++.|++||+.+++. +..+..+..
T Consensus 143 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 222 (331)
T 3u4y_A 143 ILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL 222 (331)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC
T ss_pred EEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC
Confidence 45556688 999998754332111 000112357999999999976555 4689999999999988 777775432
Q ss_pred cCceeeeeeeccCC
Q psy15157 330 MGQQFELTLTVDAD 343 (344)
Q Consensus 330 ~~~~~~~~~~~~~~ 343 (344)
...+.+++|+.
T Consensus 223 ---~~~~~~spdg~ 233 (331)
T 3u4y_A 223 ---PGTIVVSRDGS 233 (331)
T ss_dssp ---CCCEEECTTSS
T ss_pred ---CceEEECCCCC
Confidence 34556666654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=147.56 Aligned_cols=183 Identities=11% Similarity=0.032 Sum_probs=131.5
Q ss_pred CCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-CCeEEEEEcCCCCEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-EEVTCLEFHPSAPILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s 196 (344)
..+|++++|+|||++||+++. ||+++||++++ .. ...+..|. ..+..++|+|+ +++++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~------------------g~-~~~lt~~~~~~~~~~~~spd-~~l~~ 80 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG------------------GE-TVKLNREPINSVLDPHYGVG-RVILV 80 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEET------------------TE-EEECCSSCCSEECEECTTCS-EEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcC------------------CC-cEeeecccccccccccCCCC-eEEEE
Confidence 457999999999999999887 99999999742 22 33444454 68999999999 77777
Q ss_pred EeC---CCcEEEEEcCC--CccccceeeeccccceEEEEEecCCCEE-EEEeCCCEEEEE--------------------
Q psy15157 197 GSK---DKTVKMFDYSK--SSVRKAHKTIQESTFVRCLSFHPCGDYM-VVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 197 ~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~-------------------- 250 (344)
++. +....+|.+.. ..... . ......+...+|+|+|+.+ ++...++.+.+|
T Consensus 81 ~~~~~g~~~~~l~~~~~~~~g~~~--~-l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~ 157 (582)
T 3o4h_A 81 RDVSKGAEQHALFKVNTSRPGEEQ--R-LEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVS 157 (582)
T ss_dssp EECSTTSCCEEEEEEETTSTTCCE--E-CTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEE
T ss_pred eccCCCCcceEEEEEeccCCCccc--c-ccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEE
Confidence 775 55567766544 21111 1 1122234466888888643 333333333354
Q ss_pred cCCCCEEEEEeCC----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC--cEEEEEcCCCeeEEEe
Q psy15157 251 SSDGRIYCSGSKD----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS--LVKLWELSSARCLIAY 324 (344)
Q Consensus 251 ~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~ 324 (344)
+|||+++++++.+ +.|++||+.+++.. .+. .+. ..+..++|+|||++|++++.++ .|++||+.+++.. .+
T Consensus 158 spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~-~~~-~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~ 233 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD-SGE-GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL 233 (582)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEETTTCCCE-EEC-CSS-CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC
T ss_pred CCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eee-cCC-CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec
Confidence 7999999988877 78999999988765 343 333 4689999999999999888888 8999999999887 66
Q ss_pred ecCC
Q psy15157 325 TGAG 328 (344)
Q Consensus 325 ~~~~ 328 (344)
.++.
T Consensus 234 ~~~~ 237 (582)
T 3o4h_A 234 ELPS 237 (582)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 6654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-16 Score=151.02 Aligned_cols=193 Identities=7% Similarity=0.043 Sum_probs=132.6
Q ss_pred eEEecCCC---ceEEEEECCCCCEEEEEeCC---------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC
Q psy15157 113 AYVTSHKS---PCRAGAFSIDGQLCATGSVD---------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE 180 (344)
Q Consensus 113 ~~~~~h~~---~v~~~~~s~~~~~l~sg~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 180 (344)
..+.+|.. .|.+++|||||++|++++.+ +.+.+||+.++.. ..+....+|..
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~----------------~~l~~~~~~~~ 114 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP----------------QSLDPPEVSNA 114 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC----------------EECCCTTCCSC
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce----------------EeccCCccccc
Confidence 44556654 49999999999999999875 7888999975321 11112234555
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeecccc------------------ceEEEEEecCCCEEEEEe
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQEST------------------FVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~ 242 (344)
.+..++|+|+|+.|+.++. +.|++||+.+++...... .+.. .+.+++|+|+|++|++++
T Consensus 115 ~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~--~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 115 KLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS--TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp CCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC--CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred cccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec--CCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 6889999999999998886 799999998876533222 1111 237899999999999876
Q ss_pred CCC----------------------------------EEEE-----------------------------EcCCCCEEEE
Q psy15157 243 DHF----------------------------------VLRL-----------------------------YSSDGRIYCS 259 (344)
Q Consensus 243 ~~~----------------------------------~i~~-----------------------------~~~~~~~l~~ 259 (344)
.++ .+.+ |+|+|+++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 192 INDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp EECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred ECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 432 4444 3678888866
Q ss_pred EeC----CCcEEEEeCCCCeEEeeecccCCCccE----EEEEEccCCCEEEE--EeCCC------cEEEEE-cCCCe--e
Q psy15157 260 GSK----DGDIKIWDGVSSKCVATFSKAHDGAEI----SSLTFTRNGKYLLS--SGKDS------LVKLWE-LSSAR--C 320 (344)
Q Consensus 260 ~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~v----~~i~~~~~~~~l~s--~~~dg------~i~vwd-~~~~~--~ 320 (344)
.+. +..|++||+.+++....+...+. ..+ ..++|+|||+.|+. +..++ .|++|| ..+++ +
T Consensus 272 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 350 (723)
T 1xfd_A 272 WLNRAQNVSILTLCDATTGVCTKKHEDESE-AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDN 350 (723)
T ss_dssp EEETTSCEEEEEEEETTTCCEEEEEEEECS-SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCC
T ss_pred EEcCCCCeEEEEEEeCCCCcceEEEEeccC-CEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccc
Confidence 643 35799999999987665543332 233 37899999997764 45666 577777 34444 1
Q ss_pred EEEee
Q psy15157 321 LIAYT 325 (344)
Q Consensus 321 ~~~~~ 325 (344)
...+.
T Consensus 351 ~~~l~ 355 (723)
T 1xfd_A 351 IQSIT 355 (723)
T ss_dssp CCBSC
T ss_pred eeEee
Confidence 44554
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.9e-16 Score=156.20 Aligned_cols=209 Identities=15% Similarity=0.116 Sum_probs=150.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc-CCCCE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH-PSAPI 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~ 193 (344)
+..|. .+.+.+|+|+|++++++ .++.|.+|++...... ..... ..........|...+.+++|+ |+|+.
T Consensus 241 l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~-~l~~~-------~~~~~~~~~~~~~~v~~~~~S~pdG~~ 310 (1045)
T 1k32_A 241 HTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE-KIEIG-------DLESPEDRIISIPSKFAEDFSPLDGDL 310 (1045)
T ss_dssp CCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE-ECCCC-------CCCBCCSEEEECGGGGEEEEEECGGGC
T ss_pred ecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEee-eeccC-------cccccccccccccccceeeecCCCCCE
Confidence 44454 46778999999999888 4899999998422111 00000 000000111255678999999 99998
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeecccc-ceEEEEEecCCCEEEEEeCCCEEE-EE---------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQEST-FVRCLSFHPCGDYMVVGTDHFVLR-LY--------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~i~-~~--------------------- 250 (344)
|++++ ++.|.+|++.++.... ...+.. .+..++|+ +|+.+++++.+..+. +|
T Consensus 311 la~~~-~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~ 385 (1045)
T 1k32_A 311 IAFVS-RGQAFIQDVSGTYVLK---VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMG 385 (1045)
T ss_dssp EEEEE-TTEEEEECTTSSBEEE---CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEE
T ss_pred EEEEE-cCEEEEEcCCCCceEE---ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeE
Confidence 88887 8899999998765332 223444 78899999 999988888777776 54
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC----------cEEEEEcCCCe
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS----------LVKLWELSSAR 319 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg----------~i~vwd~~~~~ 319 (344)
+|+|+++++++.++.|++||+.+++...... .+. ..+.+++|+|||++|++++.++ .|++||+.+++
T Consensus 386 ~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~-~~~-~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 386 VDRNGKFAVVANDRFEIMTVDLETGKPTVIER-SRE-AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSS-SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ECCCCCEEEEECCCCeEEEEECCCCceEEecc-CCC-CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 7899999999999999999999998776664 343 3588999999999999887654 89999999987
Q ss_pred eEEEeecCCCcCceeeeeeeccCC
Q psy15157 320 CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..+..+... .....|++|+.
T Consensus 464 -~~~l~~~~~~--~~~~~~spdG~ 484 (1045)
T 1k32_A 464 -IFAATTENSH--DYAPAFDADSK 484 (1045)
T ss_dssp -EEECSCSSSB--EEEEEECTTSC
T ss_pred -EEEeeCCCcc--cCCceEcCCCC
Confidence 5666665433 34455666654
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-14 Score=122.26 Aligned_cols=204 Identities=10% Similarity=0.171 Sum_probs=146.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe------cCCcCCeEEEEE-cC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL------YDHIEEVTCLEF-HP 189 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~-~~ 189 (344)
+|-..+.+++++++++++++...++.|.+||... .....+ .++...+.++++ .+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-------------------~~~~~~~~~~~~~~~~~~p~~i~~~~~ 87 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-------------------RFKFQFGECGKRDSQLLYPNRVAVVRN 87 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-------------------CEEEEECCBSSSTTCBSSEEEEEEETT
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCC-------------------cEEEEecccCCCcccccCceEEEEEcC
Confidence 5567899999999999999988899999999752 122222 234567899999 56
Q ss_pred CCCEEEEEeC-CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 190 SAPILASGSK-DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 190 ~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
++.++++... ++.|++|| .+++....+. ......+..++++++|+.+++...++.+.+|
T Consensus 88 ~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYN-QYGQFVRKFG-ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEF 165 (286)
T ss_dssp TTEEEEEECGGGCEEEEEC-TTSCEEEEEC-TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSS
T ss_pred CCeEEEEcCCCCCEEEEEC-CCCcEEEEec-CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCC
Confidence 7776666643 89999999 4454433222 1233467899999999877777777778777
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC-cEEEEEcCCCeeEEE
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-LVKLWELSSARCLIA 323 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-~i~vwd~~~~~~~~~ 323 (344)
+++|+++++...++.|++||. .++.+..+........+..++++++|+++++...++ .|++||. +++.+..
T Consensus 166 p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~ 243 (286)
T 1q7f_A 166 PNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISA 243 (286)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEE
T ss_pred cEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEE
Confidence 556777777777889999997 455555554221113589999999999888888776 9999995 6788888
Q ss_pred eecCCCcCceeeeeeeccCC
Q psy15157 324 YTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~ 343 (344)
+..+........+.+++++.
T Consensus 244 ~~~~~~~~~~~~i~~~~~g~ 263 (286)
T 1q7f_A 244 LESKVKHAQCFDVALMDDGS 263 (286)
T ss_dssp EEESSCCSCEEEEEEETTTE
T ss_pred EcccCCCCcceeEEECCCCc
Confidence 87765544455666666543
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.69 E-value=4.9e-14 Score=123.47 Aligned_cols=199 Identities=14% Similarity=0.157 Sum_probs=128.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+...+..+++ +++++++++ .++.|.+|++............ ... . ..-......+...+.+++|+|+++++
T Consensus 96 ~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~-~~~--~-g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 96 KTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDV-IEF--K-GSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp ECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE-EEC--C-CCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred ccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCccccee-EEc--c-CCCCCccccCCCcceEEEECCCCCEE
Confidence 345567778888 788777766 5889999999642111100000 000 0 00000011233457889999999966
Q ss_pred EEEe-CCCcEEEEEcCCCcc------c-c----ceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE-----------
Q psy15157 195 ASGS-KDKTVKMFDYSKSSV------R-K----AHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY----------- 250 (344)
Q Consensus 195 ~s~~-~dg~i~iwd~~~~~~------~-~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~----------- 250 (344)
++++ .++.|.+|++..... . . ..........+..++|+|+|+++++++ .++.+.+|
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 5544 589999999876432 1 0 111223345678999999999888877 57777776
Q ss_pred -----------------cCCCCEEEEEeCC--CcEEEEeCC--CCe--EEeeecccCCCccEEEEEEccCCCEEEEEe-C
Q psy15157 251 -----------------SSDGRIYCSGSKD--GDIKIWDGV--SSK--CVATFSKAHDGAEISSLTFTRNGKYLLSSG-K 306 (344)
Q Consensus 251 -----------------~~~~~~l~~~~~d--g~i~iwd~~--~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~ 306 (344)
+|+|+++++++.+ +.|.+|++. +++ .+..+.. +..+.+++|+|+|++|++++ .
T Consensus 250 ~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETT
T ss_pred EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECC
Confidence 7899988776654 899999985 444 3333432 34578999999999998887 6
Q ss_pred CCcEEEEEc--CCCeeEEE
Q psy15157 307 DSLVKLWEL--SSARCLIA 323 (344)
Q Consensus 307 dg~i~vwd~--~~~~~~~~ 323 (344)
++.|.+|++ .+|+....
T Consensus 327 ~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 327 TNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp TTEEEEEEECTTTCCEEEC
T ss_pred CCCEEEEEEECCCCcEeec
Confidence 789999654 56665443
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.9e-14 Score=124.08 Aligned_cols=207 Identities=13% Similarity=0.177 Sum_probs=136.1
Q ss_pred CCCceEEEEECCCCCEEEEEeCC----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVD----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
|...+..++|+|+|++|++++.+ +.|.+|+++... .....+.....+......+++ ++++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~--------------g~~~~~~~~~~~~~~p~~~~~--dg~~ 111 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK--------------GTLHLLNTQKTMGADPCYLTT--NGKN 111 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT--------------TEEEEEEEEECSSSCEEEEEE--CSSE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC--------------CcEEEeeEeccCCCCcEEEEE--CCCE
Confidence 77788999999999999999886 799999986310 011233344445667778888 7776
Q ss_pred EEEEe-CCCcEEEEEcCCCcccccee-eec-----------cccceEEEEEecCCCEEEEEeC-CCEEEE----------
Q psy15157 194 LASGS-KDKTVKMFDYSKSSVRKAHK-TIQ-----------ESTFVRCLSFHPCGDYMVVGTD-HFVLRL---------- 249 (344)
Q Consensus 194 l~s~~-~dg~i~iwd~~~~~~~~~~~-~~~-----------~~~~v~~~~~~~~~~~l~~~~~-~~~i~~---------- 249 (344)
|++++ .++.|.+|++.......... ... ....+.+++|+|+|++++++.. ++.+.+
T Consensus 112 l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 112 IVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANAD 191 (361)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcc
Confidence 66665 68899999997543222111 101 1223578999999998776543 333222
Q ss_pred --------------------------EcCCCCEEEEEe-CCCcEEEEeCCCCeE--Eeeeccc-CCCccEEEEEEccCCC
Q psy15157 250 --------------------------YSSDGRIYCSGS-KDGDIKIWDGVSSKC--VATFSKA-HDGAEISSLTFTRNGK 299 (344)
Q Consensus 250 --------------------------~~~~~~~l~~~~-~dg~i~iwd~~~~~~--~~~~~~~-~~~~~v~~i~~~~~~~ 299 (344)
|+|+|+++++++ .++.|.+||+.+++. +..+... ........++|+|||+
T Consensus 192 ~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~ 271 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK 271 (361)
T ss_dssp TCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS
T ss_pred cccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC
Confidence 477888777766 689999999987754 2222211 1113468999999999
Q ss_pred EEEEEeC--CCcEEEEEcC--CCe--eEEEeecCCCcCceeeeeeeccCC
Q psy15157 300 YLLSSGK--DSLVKLWELS--SAR--CLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 300 ~l~s~~~--dg~i~vwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+|++++. ++.|.+|++. +++ .+..+.. + .....+.+++|++
T Consensus 272 ~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g--~~~~~~~~spdg~ 318 (361)
T 3scy_A 272 YLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-G--IHPRNFIITPNGK 318 (361)
T ss_dssp EEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-S--SCCCEEEECTTSC
T ss_pred EEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-C--CCCceEEECCCCC
Confidence 9977665 4899999996 454 3444443 2 2334566666654
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.1e-15 Score=148.00 Aligned_cols=203 Identities=11% Similarity=0.143 Sum_probs=149.5
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|...+.++.|+++ .++++++.|+.++||.++. .......+..|. .+...+|+|+|+
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~-----------------~g~~~~~l~~~~-~~~~~~~SpDG~ 257 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDL-----------------DGKDLRKHTSFT-DYYPRHLNTDGR 257 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEET-----------------TSCSCEECCCCC-SSCEEEEEESSS
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeC-----------------CCCcceEecCCC-CcceeeEcCCCC
Confidence 345789999999999988 7778888899999998752 111223444454 356779999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceee---------eccccceEEEEEe-cCCCEEEEEeCCCEEEEE------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKT---------IQESTFVRCLSFH-PCGDYMVVGTDHFVLRLY------------ 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~v~~~~~~-~~~~~l~~~~~~~~i~~~------------ 250 (344)
.|+.+. ++.|++||+...... .+.. ..+...+.+++|+ |+|+++++++ ++.+.+|
T Consensus 258 ~la~~~-~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~ 334 (1045)
T 1k32_A 258 RILFSK-GGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPE 334 (1045)
T ss_dssp CEEEEE-TTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSC
T ss_pred EEEEEe-CCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccC
Confidence 888874 899999998443322 1111 0123468899999 9999998887 5556555
Q ss_pred -----------cCCCCEEEEEeCCCcEE-EEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 251 -----------SSDGRIYCSGSKDGDIK-IWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
+ +|+.++.++.++.+. +||..+++... +. .+. ..+.+++|+|||++|++++.++.|++||+.++
T Consensus 335 ~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~-~~~-~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 335 PLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FE-ENL-GNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp CSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CC-CCC-CSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ec-CCc-cceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 4 567788888888888 99998876543 33 333 46999999999999999999999999999999
Q ss_pred eeEEEeecCCCcCceeeeeeeccCC
Q psy15157 319 RCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+....+.+|... ...+.+++|+.
T Consensus 411 ~~~~~~~~~~~~--v~~~~~SpDG~ 433 (1045)
T 1k32_A 411 KPTVIERSREAM--ITDFTISDNSR 433 (1045)
T ss_dssp CEEEEEECSSSC--CCCEEECTTSC
T ss_pred ceEEeccCCCCC--ccceEECCCCC
Confidence 988877666443 34556666654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.8e-14 Score=122.67 Aligned_cols=206 Identities=11% Similarity=0.115 Sum_probs=144.5
Q ss_pred CCceEEEEECCCCCEEEEEeCC------------------------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVD------------------------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT 174 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~d------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (344)
-+.|.+++++++|+++++.+.+ +.|.+||..+ +.....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~------------------g~~~~~ 84 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN------------------AEILQS 84 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT------------------CCEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC------------------CeEEec
Confidence 4679999999999999988877 3688888753 223333
Q ss_pred ec-CCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-cccceee-------eccccceEEEEEec-CCCEEEEEe-C
Q psy15157 175 LY-DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS-VRKAHKT-------IQESTFVRCLSFHP-CGDYMVVGT-D 243 (344)
Q Consensus 175 ~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~-------~~~~~~v~~~~~~~-~~~~l~~~~-~ 243 (344)
+. ++......++++++++++++...++.|++||..... ....+.. ..+......++++| +|..+++.+ .
T Consensus 85 ~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 85 SGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp ECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred cCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 32 455678999999999999998889999999986531 2221111 12233578999999 777777775 6
Q ss_pred CCEEEEE--------------------------------cCC-CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE
Q psy15157 244 HFVLRLY--------------------------------SSD-GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290 (344)
Q Consensus 244 ~~~i~~~--------------------------------~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 290 (344)
++.|++| +++ +.++++...++.|++||..+++.+..+.....+..+.
T Consensus 165 ~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~ 244 (329)
T 3fvz_A 165 NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVF 244 (329)
T ss_dssp CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcc
Confidence 8888877 344 5666677778889999998888888775443345688
Q ss_pred EEEEcc------CCCEEEEEeCCCcEEEEEcCCCeeEEEeecC-CCcCceeeeeeeccC
Q psy15157 291 SLTFTR------NGKYLLSSGKDSLVKLWELSSARCLIAYTGA-GSMGQQFELTLTVDA 342 (344)
Q Consensus 291 ~i~~~~------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 342 (344)
+++|+| +|+..++...+..|++||+.+++.+..+... ........+.+++++
T Consensus 245 ~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 245 AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG 303 (329)
T ss_dssp EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS
T ss_pred eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC
Confidence 999999 3333333344568999999999999988522 223334455555554
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.2e-16 Score=147.97 Aligned_cols=177 Identities=14% Similarity=0.190 Sum_probs=126.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC---CeEEEEEcCCCCEEEEEeC-
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE---EVTCLEFHPSAPILASGSK- 199 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~- 199 (344)
.++|+|+|++++++ .|+.|++||+.+ +.....+..|.. .+.+++|+|||+.|++++.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~------------------g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~ 80 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIET------------------GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDY 80 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSS------------------CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCC------------------CcEEEEEccccccccceeeEEECCCCCeEEEEecC
Confidence 67899999766554 699999999964 233444444433 4889999999999988876
Q ss_pred --------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE------------------------
Q psy15157 200 --------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL------------------------ 247 (344)
Q Consensus 200 --------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i------------------------ 247 (344)
++.|++||+.+++....... ...+..++|+|+|+.|+.+.. +.|
T Consensus 81 ~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~~-~~i~~~~~~~g~~~~l~~~~~~~~v~~ 156 (719)
T 1z68_A 81 SKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVYQ-NNIYLKQRPGDPPFQITFNGRENKIFN 156 (719)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEET-TEEEEESSTTSCCEECCCCCBTTTEEE
T ss_pred ceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEEC-CeEEEEeCCCCCcEEEecCCCcCCeEc
Confidence 78999999998765211111 235788999999999988752 222
Q ss_pred -----------------EEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCCeE
Q psy15157 248 -----------------RLYSSDGRIYCSGSKDG----------------------------------DIKIWDGVSSKC 276 (344)
Q Consensus 248 -----------------~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~ 276 (344)
..|+|||++|++++.|. .|++||+.+++.
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 34688999999988652 788999998864
Q ss_pred E--eeec-----ccCCCccEEEEEEccCCCEEEEEeCC----CcEEEEE----cCCCeeEEEe
Q psy15157 277 V--ATFS-----KAHDGAEISSLTFTRNGKYLLSSGKD----SLVKLWE----LSSARCLIAY 324 (344)
Q Consensus 277 ~--~~~~-----~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~vwd----~~~~~~~~~~ 324 (344)
. ..+. ..+. ..+.+++|+||++++++.... ..|++|| +.++++...+
T Consensus 237 ~~~~~~~~~~~~~~~~-~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 237 VGPQEVPVPAMIASSD-YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp HCCEECCCCHHHHTSC-EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred cceeEccCCccCCCCc-ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEE
Confidence 2 1111 1233 468999999998877775433 2489999 8888776555
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.66 E-value=4.9e-15 Score=142.24 Aligned_cols=174 Identities=8% Similarity=0.089 Sum_probs=125.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcC-----CeEEEEEcCCCCEEE
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIE-----EVTCLEFHPSAPILA 195 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~ 195 (344)
....++|+|||++++++ |++|++||+.++ .....+.+|.. ...+++|||||+.|+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~ 77 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYG------------------NSSVFLENSTFDEFGHSINDYSISPDGQFIL 77 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTC------------------CEEEEECTTTTTTCCSCCCEEEECTTSSEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCC------------------ceEEEEechhhhhhcccccceEECCCCCEEE
Confidence 45578999999999986 999999999653 23344555543 234588999999999
Q ss_pred EEeCC---------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE-------------------
Q psy15157 196 SGSKD---------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL------------------- 247 (344)
Q Consensus 196 s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i------------------- 247 (344)
.++.+ +.+.+||+.+++... ...+...+...+|||+|+.|+.+.. +.|
T Consensus 78 ~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---l~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~~~~~~lt~~g~~ 153 (740)
T 4a5s_A 78 LEYNYVKQWRHSYTASYDIYDLNKRQLIT---EERIPNNTQWVTWSPVGHKLAYVWN-NDIYVKIEPNLPSYRITWTGKE 153 (740)
T ss_dssp EEEEEEECSSSCEEEEEEEEETTTTEECC---SSCCCTTEEEEEECSSTTCEEEEET-TEEEEESSTTSCCEECCSCCBT
T ss_pred EEECCeeeEEEccceEEEEEECCCCcEEE---cccCCCcceeeEECCCCCEEEEEEC-CeEEEEECCCCceEEEcCCCCc
Confidence 88876 567799999986543 2334567899999999999987742 222
Q ss_pred ----------------------EEEcCCCCEEEEEeCCC------------------------------------cEEEE
Q psy15157 248 ----------------------RLYSSDGRIYCSGSKDG------------------------------------DIKIW 269 (344)
Q Consensus 248 ----------------------~~~~~~~~~l~~~~~dg------------------------------------~i~iw 269 (344)
..|+|||+.|+.++.|. .|++|
T Consensus 154 ~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~ 233 (740)
T 4a5s_A 154 DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVV 233 (740)
T ss_dssp TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred cceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEE
Confidence 23799999998875332 48889
Q ss_pred eCCC---Ce--EEeeecc-----cCCCccEEEEEEccCCCEEEEEe----CCCcEEEEEcCCCe
Q psy15157 270 DGVS---SK--CVATFSK-----AHDGAEISSLTFTRNGKYLLSSG----KDSLVKLWELSSAR 319 (344)
Q Consensus 270 d~~~---~~--~~~~~~~-----~~~~~~v~~i~~~~~~~~l~s~~----~dg~i~vwd~~~~~ 319 (344)
|+.+ ++ ....+.. .+ ...+..++|+|||+.++... .+..|++||+.+|+
T Consensus 234 d~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 234 NTDSLSSVTNATSIQITAPASMLIG-DHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp ETTSCCSSSCCCEEEECCCHHHHTS-CEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred ECCCCCCCCcceEEEecCCccCCCC-CeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 9988 73 1222321 13 34699999999999766543 23479999999987
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=3.5e-14 Score=124.70 Aligned_cols=185 Identities=12% Similarity=0.103 Sum_probs=123.1
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcC-CccccccCCCCCCcCCCCCCceEEE--ecCCcCCeEEEEEcCCCCE-
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVD-RMLAKSSMESSEPQNDQQGHPVIRT--LYDHIEEVTCLEFHPSAPI- 193 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~- 193 (344)
+...+..++|+|+|++|++++.+ .|.+|++. ++ ..... ...+ +...+++|+|+++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g------------------~~~~~~~~~~~-g~~~~~~~spdg~~l 97 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT------------------EIVHEASHPIG-GHPRANDADTNTRAI 97 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT------------------EEEEEEEEECC-SSGGGGCTTSCCEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC------------------CEEEeeEeecC-CCCccEEECCCCCEE
Confidence 44578899999999999999888 99999985 22 11111 1111 23456899999984
Q ss_pred -EEEEe-------------CCCcEEEEEcCC-Cccccceeee--ccccceEEEEEecCCCEEEEEeC-CCEEEE------
Q psy15157 194 -LASGS-------------KDKTVKMFDYSK-SSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTD-HFVLRL------ 249 (344)
Q Consensus 194 -l~s~~-------------~dg~i~iwd~~~-~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~------ 249 (344)
+++++ .+|.+.+|++.. ++........ .+...+.+++|+|+|++++++.. ++.|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~ 177 (365)
T 1jof_A 98 FLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLAS 177 (365)
T ss_dssp EEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCC
Confidence 44553 689999999974 4433222221 23456889999999998887643 334433
Q ss_pred ----------------------EcCCCCEEEEEeC-CCcEEEEeCC--CCeEEe---e---ecccCCC-c-------cEE
Q psy15157 250 ----------------------YSSDGRIYCSGSK-DGDIKIWDGV--SSKCVA---T---FSKAHDG-A-------EIS 290 (344)
Q Consensus 250 ----------------------~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~---~~~~~~~-~-------~v~ 290 (344)
|+|+|+++++++. ++.|.+|+.. +++... . +.....+ . .+.
T Consensus 178 g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 178 GEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp SCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred CCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc
Confidence 3677877777664 6889999764 555421 2 2111111 1 488
Q ss_pred EEE-EccCCCEEEEEeCCC------cEEEEEcC-CCeeEE
Q psy15157 291 SLT-FTRNGKYLLSSGKDS------LVKLWELS-SARCLI 322 (344)
Q Consensus 291 ~i~-~~~~~~~l~s~~~dg------~i~vwd~~-~~~~~~ 322 (344)
.++ |+|||++|++++.+. .|.+|++. +++...
T Consensus 258 ~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred cEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 999 999999988775432 89999996 566543
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-14 Score=126.46 Aligned_cols=180 Identities=10% Similarity=0.121 Sum_probs=122.8
Q ss_pred ceEEEEECCCCCE--EEEEe-------------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec----CCcCC
Q psy15157 121 PCRAGAFSIDGQL--CATGS-------------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY----DHIEE 181 (344)
Q Consensus 121 ~v~~~~~s~~~~~--l~sg~-------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~h~~~ 181 (344)
.+.+++|+|+|++ +++++ .+|++.+|+++. .+.....+. .+...
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~-----------------~g~~~~~~~~~~~~~~~~ 146 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE-----------------TGKLEKNVQNYEYQENTG 146 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECT-----------------TCCEEEEEEEEECCTTCC
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCC-----------------CCcCcceEeeEEeCCCCc
Confidence 3667899999994 55653 689999999862 111211111 35567
Q ss_pred eEEEEEcCCCCEEEEEeC-CCcEEEEEcC-CCccccceeee--ccccceEEEEEecCCCEEEEEeC-CCEEE--------
Q psy15157 182 VTCLEFHPSAPILASGSK-DKTVKMFDYS-KSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTD-HFVLR-------- 248 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~-dg~i~iwd~~-~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-~~~i~-------- 248 (344)
+.+++|+|+|++++++.. ++.|++||+. +++........ .+...+..++|+|+|+++++++. ++.+.
T Consensus 147 ~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence 999999999998877664 6899999998 66543221211 12456889999999998877642 22111
Q ss_pred ---------------------------------E-EcCCCCEEEEEeCCC------cEEEEeCC-CCeEEeee--cccCC
Q psy15157 249 ---------------------------------L-YSSDGRIYCSGSKDG------DIKIWDGV-SSKCVATF--SKAHD 285 (344)
Q Consensus 249 ---------------------------------~-~~~~~~~l~~~~~dg------~i~iwd~~-~~~~~~~~--~~~~~ 285 (344)
. |+|+|+++++++.+. .|.+|++. +++..... ...+
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~- 305 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP- 305 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS-
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC-
Confidence 2 778888887765433 79999986 56544311 1112
Q ss_pred CccEEEEEEcc---CCCEEEEEeCC-CcEEEEEcCCC
Q psy15157 286 GAEISSLTFTR---NGKYLLSSGKD-SLVKLWELSSA 318 (344)
Q Consensus 286 ~~~v~~i~~~~---~~~~l~s~~~d-g~i~vwd~~~~ 318 (344)
...+..++|+| ||++|++++.+ +.|.+|++...
T Consensus 306 ~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 306 TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 12356789999 89999998864 89999999776
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-13 Score=116.39 Aligned_cols=181 Identities=13% Similarity=0.204 Sum_probs=130.7
Q ss_pred cCCCceEEEEE-CCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCE
Q psy15157 117 SHKSPCRAGAF-SIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 117 ~h~~~v~~~~~-s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~ 193 (344)
+|...+.++++ .++++++++... ++.|.+||.. ...+..+. .+...+.++++++++++
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-------------------g~~~~~~~~~~~~~~~~i~~~~~g~l 134 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-------------------GQFVRKFGATILQHPRGVTVDNKGRI 134 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-------------------SCEEEEECTTTCSCEEEEEECTTSCE
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-------------------CcEEEEecCccCCCceEEEEeCCCCE
Confidence 34567899999 577877777643 8899999953 22233332 34467899999999998
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------- 250 (344)
+++...++.|.+||.. ++....+....+...+..++++++|+.+++...++.|.+|
T Consensus 135 ~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 135 IVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVG 213 (286)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEE
T ss_pred EEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEE
Confidence 8888888999999965 3333222211234468899999999877777777777776
Q ss_pred -cCCCCEEEEEeCCC-cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 251 -SSDGRIYCSGSKDG-DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 -~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+++|+++++...++ .|.+||. .++.+..+........+.+++++|+|+++++ +.|+.|++|++....
T Consensus 214 ~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 214 INSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp ECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred ECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 56778888877775 9999995 5666666653333234789999999987776 679999999986543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.62 E-value=8.3e-15 Score=136.78 Aligned_cols=181 Identities=8% Similarity=0.071 Sum_probs=125.3
Q ss_pred EEecCC-CceEEEEECCCCCEEEEEeC---CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 114 YVTSHK-SPCRAGAFSIDGQLCATGSV---DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 114 ~~~~h~-~~v~~~~~s~~~~~l~sg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
.+..|. ..|..++|||| +++++++. +...++|.++.. ...... .+..+. .+...+|+|
T Consensus 58 ~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~---------------~~g~~~-~l~~~~-~~~~~~~s~ 119 (582)
T 3o4h_A 58 KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS---------------RPGEEQ-RLEAVK-PMRILSGVD 119 (582)
T ss_dssp ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT---------------STTCCE-ECTTSC-SBEEEEEEE
T ss_pred eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc---------------CCCccc-cccCCC-CceeeeeCC
Confidence 345555 68999999999 78887775 556677766420 001111 222222 234568888
Q ss_pred CCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC----CEEEEE--------------
Q psy15157 190 SAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----FVLRLY-------------- 250 (344)
Q Consensus 190 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~~-------------- 250 (344)
+++ .+++.+.++.+.+||+.+++...... +.. .+++|+|+|++++.++.+ ..+.+|
T Consensus 120 dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~---~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~ 194 (582)
T 3o4h_A 120 TGEAVVFTGATEDRVALYALDGGGLRELAR---LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE 194 (582)
T ss_dssp CSSCEEEEEECSSCEEEEEEETTEEEEEEE---ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSS
T ss_pred CCCeEEEEecCCCCceEEEccCCcEEEeec---CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCC
Confidence 875 33344444555599998875433221 222 788999999999987765 566665
Q ss_pred --------cCCCCEEEEEeCCC--cEEEEeCCCCeEEeeecccCCCccEEEEE--------EccCCCEEEEEeCCCcEEE
Q psy15157 251 --------SSDGRIYCSGSKDG--DIKIWDGVSSKCVATFSKAHDGAEISSLT--------FTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~--------~~~~~~~l~s~~~dg~i~v 312 (344)
+|||+.|+++..++ .|++||+.+++.. .+. .+. ..+..+. |+|||.++++++.|+.+++
T Consensus 195 ~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l 271 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE-LPS-KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAV 271 (582)
T ss_dssp CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC-CSC-SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEE
T ss_pred CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc-CCC-cChhhhhhccccceeEcCCCcEEEEEEcCCcEEE
Confidence 89999999888888 8999999998877 443 333 2455556 9999999999999999999
Q ss_pred EEcCCCeeEE
Q psy15157 313 WELSSARCLI 322 (344)
Q Consensus 313 wd~~~~~~~~ 322 (344)
|++ |+.+.
T Consensus 272 ~~~--g~~~~ 279 (582)
T 3o4h_A 272 FID--GERVE 279 (582)
T ss_dssp EET--TEEEC
T ss_pred EEE--CCeec
Confidence 999 76654
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.1e-14 Score=125.02 Aligned_cols=188 Identities=11% Similarity=0.077 Sum_probs=125.3
Q ss_pred eeEEecCCCceEE-----EEECCCCCEEEEEeC-CCe--EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeE
Q psy15157 112 TAYVTSHKSPCRA-----GAFSIDGQLCATGSV-DAS--IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT 183 (344)
Q Consensus 112 ~~~~~~h~~~v~~-----~~~s~~~~~l~sg~~-dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 183 (344)
...+..|...+.. .+|||||++|+.++. ++. |.+||+.+ ........++...+.
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~------------------g~~~~lt~~~~~~~~ 84 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT------------------QVATQLTEGRGDNTF 84 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT------------------CEEEECCCSSCBCSS
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC------------------CceEEeeeCCCCCcc
Confidence 3445666665655 889999999998887 674 77777753 333444455655555
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEE--EEecCCCEEEEEe-------------------
Q psy15157 184 CLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCL--SFHPCGDYMVVGT------------------- 242 (344)
Q Consensus 184 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~------------------- 242 (344)
.++|+|+++.|+.++.++.|++||+.+++....... +...+... .++|++.+++...
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV--PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFY 162 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec--hhhcccccceeECCCCCeeccccccCcccccccccchhhhhh
Confidence 678999999999999999999999998865433322 22223222 3477777776321
Q ss_pred ---CCCEEEE----------------------EcC-CCCEEEEEeCC------CcEEEEeCCCCeEEeeecccCCCccEE
Q psy15157 243 ---DHFVLRL----------------------YSS-DGRIYCSGSKD------GDIKIWDGVSSKCVATFSKAHDGAEIS 290 (344)
Q Consensus 243 ---~~~~i~~----------------------~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~ 290 (344)
.+..+.+ |+| +|+.++..+.+ ..|.++|...++... +.....+..+.
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~ 241 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHAEGESCT 241 (388)
T ss_dssp GGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCCTTEEEE
T ss_pred ccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCCCCcccc
Confidence 1233333 488 99988877653 378888877665433 33233223578
Q ss_pred EEEEccCCCEEEEEeC-CC----cEEEEEcCCCee
Q psy15157 291 SLTFTRNGKYLLSSGK-DS----LVKLWELSSARC 320 (344)
Q Consensus 291 ~i~~~~~~~~l~s~~~-dg----~i~vwd~~~~~~ 320 (344)
.+.|+|||+.|+..+. ++ .|++||+.+++.
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 8999999997765432 22 399999999874
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.62 E-value=9.7e-14 Score=121.66 Aligned_cols=202 Identities=11% Similarity=0.083 Sum_probs=130.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEe----------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC------
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGS----------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD------ 177 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 177 (344)
.+..+..+ .++|+|||+++++++ .+++|.+||..+. +.+..+..
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~------------------~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL------------------TFEKEISLPPKRVQ 105 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC------------------CEEEEEEECTTBCC
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC------------------cEEEEEEcCccccc
Confidence 34455444 899999999998886 3678999998642 23333321
Q ss_pred CcCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCccccc-eeeecc-------ccceEEEEEecCCCEE---------
Q psy15157 178 HIEEVTCLEFHPSAPILASGSK--DKTVKMFDYSKSSVRKA-HKTIQE-------STFVRCLSFHPCGDYM--------- 238 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~-------~~~v~~~~~~~~~~~l--------- 238 (344)
+......++++|++++|+++.. +++|.+||+.+++.... +..... ...-.-++++++|..+
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~ 185 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK 185 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc
Confidence 2234567899999998888764 58899999988765433 211000 0000112222222222
Q ss_pred -----------------------------EEEeCCCEEEE-----------------------------------EcCCC
Q psy15157 239 -----------------------------VVGTDHFVLRL-----------------------------------YSSDG 254 (344)
Q Consensus 239 -----------------------------~~~~~~~~i~~-----------------------------------~~~~~ 254 (344)
+..+.++.+.+ +++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg 265 (361)
T 2oiz_A 186 VASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS 265 (361)
T ss_dssp EEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT
T ss_pred EeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC
Confidence 22222222222 24555
Q ss_pred CEEEEEeC-----------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC--eeE
Q psy15157 255 RIYCSGSK-----------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA--RCL 321 (344)
Q Consensus 255 ~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~ 321 (344)
+.++++.. .+.|.+||+.+++.+..+..+. +.+++|+|||++|++++. +.|.+||+.++ +.+
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEE
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceee
Confidence 66555432 3479999999999998886432 789999999999999887 99999999999 999
Q ss_pred EEeecCCCcCceeeeeeeccC
Q psy15157 322 IAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.++...+.... .+.+++++
T Consensus 341 ~~i~~~G~~P~--~~~~~p~G 359 (361)
T 2oiz_A 341 RTIEGAAEASL--QVQFHPVG 359 (361)
T ss_dssp EEETTSCSSEE--EEEECCCS
T ss_pred EEeccCCCCcE--EEEecCCC
Confidence 98865544433 34555554
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.59 E-value=3.2e-12 Score=110.55 Aligned_cols=195 Identities=8% Similarity=0.071 Sum_probs=136.2
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+.++...+.+++|+++|++++++..++.|.+||..++ ........+...+.++++++++++
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~------------------~~~~~~~~~~~~~~~i~~~~dg~l 100 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK------------------EIKRPFVSHKANPAAIKIHKDGRL 100 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC------------------CEEEEEECSSSSEEEEEECTTSCE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC------------------cEEEEeeCCCCCcceEEECCCCcE
Confidence 45567778899999999998888888999999998532 222222245678999999999998
Q ss_pred EEEEeCC----CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC------CCEEEE--------------
Q psy15157 194 LASGSKD----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD------HFVLRL-------------- 249 (344)
Q Consensus 194 l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~-------------- 249 (344)
+++...+ +.|.+||..++..............+.+++++|+|+++++... .+.+..
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN 180 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC
Confidence 8877766 6899999887654322211123456889999999987776542 122322
Q ss_pred --------EcCCCCEE-EEEeCCCcEEEEeCCC-CeEEeee-----cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 250 --------YSSDGRIY-CSGSKDGDIKIWDGVS-SKCVATF-----SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 250 --------~~~~~~~l-~~~~~dg~i~iwd~~~-~~~~~~~-----~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
|+++|+.+ ++.+.++.|.+||..+ +.....+ ........+..++++++|+++++...++.|.+||
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEEC
Confidence 36788755 4555678999999864 3322111 0011113578899999999888887889999999
Q ss_pred cCCCeeEEEeecC
Q psy15157 315 LSSARCLIAYTGA 327 (344)
Q Consensus 315 ~~~~~~~~~~~~~ 327 (344)
. +++.+..+..+
T Consensus 261 ~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 261 K-RGYPIGQILIP 272 (333)
T ss_dssp T-TSCEEEEEECT
T ss_pred C-CCCEEEEEEcC
Confidence 8 67777777654
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.58 E-value=9.3e-13 Score=112.05 Aligned_cols=191 Identities=7% Similarity=0.005 Sum_probs=138.5
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+..+.....+++|+|+|+ +++++..++.|..|+..+ . ...+..+...+.+++++++++
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~------------------~--~~~~~~~~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG------------------Q--LSPEMHPSHHQNGHCLNKQGH 81 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS------------------C--EEEEESSCSSEEEEEECTTCC
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC------------------C--eEEEECCCCCcceeeECCCCc
Confidence 3455667789999999998 788888899999999863 1 344556777899999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeec--cccceEEEEEecCCCEEEE----Ee-------------CCCEEEE----
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQ--ESTFVRCLSFHPCGDYMVV----GT-------------DHFVLRL---- 249 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~----~~-------------~~~~i~~---- 249 (344)
++++...++.|.+||..+++......... ....+..++++|+|+++++ |+ ..+.+..
T Consensus 82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 82 LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 88877777899999997776432221111 1224567899999988776 22 1223332
Q ss_pred -----------------EcCCCCEEEEEeCCCcEEEEeCC-CCeE---EeeecccCCCccEEEEEEccCCCEEEEEeCCC
Q psy15157 250 -----------------YSSDGRIYCSGSKDGDIKIWDGV-SSKC---VATFSKAHDGAEISSLTFTRNGKYLLSSGKDS 308 (344)
Q Consensus 250 -----------------~~~~~~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 308 (344)
|+|+|+.+++.+.++.|.+||+. +++. ...+ .... ..+.+++++++|+++++. ++
T Consensus 162 g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~-~~p~~i~~d~~G~l~v~~--~~ 237 (296)
T 3e5z_A 162 GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEP-GKTDGLRVDAGGLIWASA--GD 237 (296)
T ss_dssp SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSS-SCCCSEEEBTTSCEEEEE--TT
T ss_pred CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCC-CCCCeEEECCCCCEEEEc--CC
Confidence 37889888777888999999986 4544 2333 2222 346789999999866665 88
Q ss_pred cEEEEEcCCCeeEEEeecCCC
Q psy15157 309 LVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 309 ~i~vwd~~~~~~~~~~~~~~~ 329 (344)
.|.+||.. ++.+..+..+..
T Consensus 238 ~v~~~~~~-g~~~~~~~~~~~ 257 (296)
T 3e5z_A 238 GVHVLTPD-GDELGRVLTPQT 257 (296)
T ss_dssp EEEEECTT-SCEEEEEECSSC
T ss_pred eEEEECCC-CCEEEEEECCCC
Confidence 89999986 888888877655
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.1e-14 Score=135.34 Aligned_cols=183 Identities=15% Similarity=0.116 Sum_probs=123.3
Q ss_pred ceEEEEECCCCCEEEEEeC---------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 121 PCRAGAFSIDGQLCATGSV---------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
.|.+++|||||++|++++. ++.|++||+.++..... ..+ ...+..++|+|||
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~----------------~~l---~~~~~~~~~SPDG 121 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG----------------NEL---PRPIQYLCWSPVG 121 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS----------------SCC---CSSBCCEEECSST
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc----------------eec---CcccccceECCCC
Confidence 3999999999999999876 78999999975422100 011 2457889999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccce-----------------EEEEEecCCCEEEEEeCCC---------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV-----------------RCLSFHPCGDYMVVGTDHF--------- 245 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~~~--------- 245 (344)
+.|+.+. |+.|++||+.+++..... ..++...+ .+++|+|+|++|++++.+.
T Consensus 122 ~~la~~~-~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~ 199 (719)
T 1z68_A 122 SKLAYVY-QNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYS 199 (719)
T ss_dssp TCEEEEE-TTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEE
T ss_pred CEEEEEE-CCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEee
Confidence 9999876 789999999887643221 11221111 4799999999999876431
Q ss_pred -------------------------EEEE-------------------------------EcCCCCEEEEEeCC----Cc
Q psy15157 246 -------------------------VLRL-------------------------------YSSDGRIYCSGSKD----GD 265 (344)
Q Consensus 246 -------------------------~i~~-------------------------------~~~~~~~l~~~~~d----g~ 265 (344)
.+.+ |+|+++++++.... ..
T Consensus 200 ~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~ 279 (719)
T 1z68_A 200 YYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSV 279 (719)
T ss_dssp ECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEE
T ss_pred ccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEE
Confidence 3333 46777777664433 24
Q ss_pred EEEEe----CCCCeEEeeec---ccCCCccEE-----EEEEccCCCEEEE--EeCCC--cEEEEEcCCCeeEEEeec
Q psy15157 266 IKIWD----GVSSKCVATFS---KAHDGAEIS-----SLTFTRNGKYLLS--SGKDS--LVKLWELSSARCLIAYTG 326 (344)
Q Consensus 266 i~iwd----~~~~~~~~~~~---~~~~~~~v~-----~i~~~~~~~~l~s--~~~dg--~i~vwd~~~~~~~~~~~~ 326 (344)
|.+|| ..++++...+. ..+. ..+. .+.|+|||+.|+. +..+| .|++||+.+++ ...+..
T Consensus 280 l~~~d~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~ 354 (719)
T 1z68_A 280 LSICDFREDWQTWDCPKTQEHIEESRT-GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS 354 (719)
T ss_dssp EEEEEECSSSSSEECCGGGEEEEECSS-SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC
T ss_pred EEEEcccCCCCCCceEEEEecccccCC-ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc
Confidence 88999 88887655442 2333 3455 7899999996543 44555 47777877665 344443
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.1e-13 Score=126.64 Aligned_cols=192 Identities=14% Similarity=0.169 Sum_probs=130.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCC-----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDA-----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
+|...+..++|||||++||.++.++ .|++||+.++ ....... ....+..++|+||+
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg------------------~~~~~~~-~~~~~~~~~wspDg 182 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA------------------KELPDVL-ERVKFSCMAWTHDG 182 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT------------------EEEEEEE-EEECSCCEEECTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC------------------CCCcccc-cCcccceEEEEeCC
Confidence 4555789999999999998776543 8999999653 2222111 11236679999999
Q ss_pred CEEEEEeCCCc----------------EEEEEcCCCccccce--eeeccccceEEEEEecCCCEEEEEeC-----CCEEE
Q psy15157 192 PILASGSKDKT----------------VKMFDYSKSSVRKAH--KTIQESTFVRCLSFHPCGDYMVVGTD-----HFVLR 248 (344)
Q Consensus 192 ~~l~s~~~dg~----------------i~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-----~~~i~ 248 (344)
+.|+.++.++. |++|++.++...... ....+...+..+.|+|+|++|+.++. +..+.
T Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~ 262 (710)
T 2xdw_A 183 KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLW 262 (710)
T ss_dssp SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEE
T ss_pred CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEE
Confidence 99988888766 999999886532122 11123445788999999999987754 34455
Q ss_pred EE-----------------------------cCCCCEEEEEeCC----CcEEEEeCCCCeE--EeeecccCCCccEEEEE
Q psy15157 249 LY-----------------------------SSDGRIYCSGSKD----GDIKIWDGVSSKC--VATFSKAHDGAEISSLT 293 (344)
Q Consensus 249 ~~-----------------------------~~~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~ 293 (344)
+| +++|..|+..+.+ +.|.+||+.++.. ...+..+.....+..+.
T Consensus 263 ~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~ 342 (710)
T 2xdw_A 263 YCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVA 342 (710)
T ss_dssp EEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEE
T ss_pred EEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEE
Confidence 44 3344555544443 3599999887641 23333233323588899
Q ss_pred EccCCCEEEEEeCCCc--EEEEEcCCCeeEEEeecC
Q psy15157 294 FTRNGKYLLSSGKDSL--VKLWELSSARCLIAYTGA 327 (344)
Q Consensus 294 ~~~~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~ 327 (344)
|++++.++++...|+. |++||+.+|+.+..+..+
T Consensus 343 ~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 343 CVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC
T ss_pred EEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC
Confidence 9988888888888885 666788788877777765
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-12 Score=109.06 Aligned_cols=172 Identities=15% Similarity=0.098 Sum_probs=136.4
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-CCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-EEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
.+++|++++.|+.|.+||.++ ++.+..+..+. ..+.++++.|+|++++ +.++.|..||.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~t------------------G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~ 63 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDT------------------KEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR 63 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTT------------------TEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT
T ss_pred CCcEEEeeCCCCEEEEEECCC------------------CeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC
Confidence 468999999999999999854 44555665555 4688999999999888 45788999998
Q ss_pred CCCccccceeeeccccceEEEEEecCCCEEEEEeC-CCEEEEE----------------------------cCCCCEEEE
Q psy15157 209 SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRLY----------------------------SSDGRIYCS 259 (344)
Q Consensus 209 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~~----------------------------~~~~~~l~~ 259 (344)
+++....+... ....+.++.+.++|+++++.+. ++.+..+ .++|+++++
T Consensus 64 -~G~~~W~~~~~-~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 64 -DGRELWNIAAP-AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp -TSCEEEEEECC-TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred -CCCEEEEEcCC-CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 77766555431 2345788899999999998876 6666554 356788888
Q ss_pred EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 260 GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 260 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
...++.|..||.. |+.+..+... ..+.++...++|+++++++.++.|..+|..+|+.+.++...
T Consensus 142 ~~~~~~v~~~d~~-G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 142 LFATSEVREIAPN-GQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp ETTTTEEEEECTT-SCEEEEEECS---SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred ecCCCEEEEECCC-CCEEEEEECC---CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 8899999999988 9988888643 23566788899999999998889999999999999998743
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-13 Score=129.55 Aligned_cols=192 Identities=13% Similarity=0.089 Sum_probs=129.1
Q ss_pred cCCCceEEEEECCCCCEEE-----EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCA-----TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~-----sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
+|...+..++|||||++|| .|+.+..|++||+.++.... ...+... ....++|+|||
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~----------------~~~~~~~--~~~~~~wspDg 179 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK----------------VDVIEGG--KYATPKWTPDS 179 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS----------------SCCBSCC--TTCCCEECTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC----------------CcccCcc--cccceEEecCC
Confidence 5666899999999999998 45556789999997642210 0011111 12578999999
Q ss_pred CEEEEEeCCCc-------------EEEEEcCCCcccc--ceeeeccccceEEEEEecCCCEEEEEeCCC----EEEEE--
Q psy15157 192 PILASGSKDKT-------------VKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGDYMVVGTDHF----VLRLY-- 250 (344)
Q Consensus 192 ~~l~s~~~dg~-------------i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~~-- 250 (344)
+.|+.++.|.. |++|++.++.... ......+...+..+.|+|+|++|++++.++ .+.++
T Consensus 180 ~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 180 KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 99999888776 9999998875321 122222345688999999999998877554 44443
Q ss_pred -------------------cCCCCEEEEEe---CCCcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 251 -------------------SSDGRIYCSGS---KDGDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 251 -------------------~~~~~~l~~~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
.++|.+++... .++.|.+||+.++.. ...+..++....+..++|+ ++.++++...
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 260 GEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp TCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred CCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 23555334333 257899999887652 1223223323468888998 7788889999
Q ss_pred CCcEEEEEcC-CCeeEEEeecC
Q psy15157 307 DSLVKLWELS-SARCLIAYTGA 327 (344)
Q Consensus 307 dg~i~vwd~~-~~~~~~~~~~~ 327 (344)
|+..+||.+. +++.+..+..+
T Consensus 339 dg~~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 339 DATSEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp TTEEEEEEEETTCCEEEECCCS
T ss_pred CCEEEEEEEeCCCCeeEEecCC
Confidence 9998888665 46666666543
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=7.9e-12 Score=108.05 Aligned_cols=182 Identities=12% Similarity=0.103 Sum_probs=133.1
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---------cCCcCCeEEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---------YDHIEEVTCLEF 187 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~ 187 (344)
++-..+..++++++|+++++...++.|++||.+... ..+..+ .++......+++
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-----------------~~~~~~~~~~~~g~~~~~~~~P~~ia~ 150 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-----------------GPLLILGRSMQPGSDQNHFCQPTDVAV 150 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-----------------CCSEEESBTTBCCCSTTCCSSEEEEEE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-----------------EEEEEecccCCCCCCccccCCCcEEEE
Confidence 445678999999999999999889999999985321 011122 245557899999
Q ss_pred cC-CCCEEEEEe-CCCcEEEEEcCCCccccceeeec--------cccceEEEEEecC-CCEEEEEeCCCEEEEEcCC-CC
Q psy15157 188 HP-SAPILASGS-KDKTVKMFDYSKSSVRKAHKTIQ--------ESTFVRCLSFHPC-GDYMVVGTDHFVLRLYSSD-GR 255 (344)
Q Consensus 188 ~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~--------~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~~~~-~~ 255 (344)
+| ++.++++.+ .++.|++||. +++....+.... +-.....++++|+ +..+++...++.|++|+++ |+
T Consensus 151 ~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 151 EPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp CTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred eCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 99 788888886 6999999994 454443332211 1134789999998 6666677788899999887 65
Q ss_pred EEEEE------------------------------eCCCcEEEEeCCCCeEEeeecc--cCCCccEEEEEEccCCCEEEE
Q psy15157 256 IYCSG------------------------------SKDGDIKIWDGVSSKCVATFSK--AHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 256 ~l~~~------------------------------~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~s 303 (344)
++.+- ..+..|++||..+++.+..+.. .+. ..+.+++++|+|.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~-~~p~~ia~~~dG~lyva 308 (329)
T 3fvz_A 230 FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHF-DMPHDIVASEDGTVYIG 308 (329)
T ss_dssp EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCC-SSEEEEEECTTSEEEEE
T ss_pred EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCcc-CCeeEEEECCCCCEEEE
Confidence 54322 1233799999999998887741 222 35899999999988888
Q ss_pred EeCCCcEEEEEcCC
Q psy15157 304 SGKDSLVKLWELSS 317 (344)
Q Consensus 304 ~~~dg~i~vwd~~~ 317 (344)
...++.|++|++..
T Consensus 309 d~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 309 DAHTNTVWKFTLTE 322 (329)
T ss_dssp ESSSCCEEEEEEEE
T ss_pred ECCCCEEEEEeCCc
Confidence 88999999999854
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.3e-12 Score=115.44 Aligned_cols=191 Identities=11% Similarity=0.014 Sum_probs=123.1
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEE--EcCCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE--FHPSAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--~~~~~~ 192 (344)
..+|...+..++|+|||+.|+.++.++.|++||+.++ ........+...+.... +++++.
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g------------------~~~~~~~~~~~~~~~~~~~~~~dg~ 137 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATL------------------EENVVYQVPAEWVGYGTWVANSDCT 137 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTC------------------CEEEEEECCTTEEEEEEEEECTTSS
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCC------------------cceeeeechhhcccccceeECCCCC
Confidence 3456556667899999999999999999999999642 22333344444444443 489998
Q ss_pred EEEEE----------------------eCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCC----
Q psy15157 193 ILASG----------------------SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHF---- 245 (344)
Q Consensus 193 ~l~s~----------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~---- 245 (344)
.++.. ..+..|.+||+.+++.... ..+...+..++|+| +|+.|+.+...+
T Consensus 138 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l---~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~ 214 (388)
T 3pe7_A 138 KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI---LQENQWLGHPIYRPYDDSTVAFCHEGPHDLV 214 (388)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE---EEESSCEEEEEEETTEEEEEEEEECSCTTTS
T ss_pred eeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe---ecCCccccccEECCCCCCEEEEEEecCCCCC
Confidence 87743 2447899999998754322 23455688999999 999887765421
Q ss_pred --EEEE------------------------EcCCCCEEEEEeC-CC----cEEEEeCCCCeEEeeecccCCCc---cEEE
Q psy15157 246 --VLRL------------------------YSSDGRIYCSGSK-DG----DIKIWDGVSSKCVATFSKAHDGA---EISS 291 (344)
Q Consensus 246 --~i~~------------------------~~~~~~~l~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~---~v~~ 291 (344)
.+.+ |+|+|+.|+..+. ++ .|++||+.+++............ ....
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 294 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDG 294 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTS
T ss_pred cceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCC
Confidence 3333 4789987755443 22 39999999887433221111000 0112
Q ss_pred EEEccCCCEEEEE---------eCCCcEEEEEcCCCeeEEEeecC
Q psy15157 292 LTFTRNGKYLLSS---------GKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 292 i~~~~~~~~l~s~---------~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+.|+|||+.|+.. ..+..|++||+.+++. ..+..+
T Consensus 295 ~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~ 338 (388)
T 3pe7_A 295 SLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARH 338 (388)
T ss_dssp SEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEEC
T ss_pred CeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccc
Confidence 3799999988754 4567899999998876 344444
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-12 Score=122.14 Aligned_cols=192 Identities=13% Similarity=0.033 Sum_probs=126.1
Q ss_pred CCCceEEEEECCCCCEEEEEeCC----------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVD----------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLE 186 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~d----------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~ 186 (344)
|...+.+++|||||+.|++++.| ..|++||+.+... ........+. .+...+..++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~~~~~~~~l~~~~~~~~~~~~ 194 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA-------------ADRSAVRELSDDAHRFVTGPR 194 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT-------------TCGGGSEESSCSCSSEECCCE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc-------------ccCCceeEEEecCCCcccCce
Confidence 67789999999999999998877 5899999864100 0001123344 4556778899
Q ss_pred EcCCCCEEEEEeCCC--------cEEEEEcC-CCccccceee-eccccceEEEEEecCCCEEEEEeCCC--EEEEEc---
Q psy15157 187 FHPSAPILASGSKDK--------TVKMFDYS-KSSVRKAHKT-IQESTFVRCLSFHPCGDYMVVGTDHF--VLRLYS--- 251 (344)
Q Consensus 187 ~~~~~~~l~s~~~dg--------~i~iwd~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~--~i~~~~--- 251 (344)
|+|||+.|+.++.++ .|++||+. ++........ ..+...+..+.|+|+|++++++..++ .+..|+
T Consensus 195 ~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 195 LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT
T ss_pred ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC
Confidence 999999998777553 79999998 4521111122 22356789999999999777777777 444441
Q ss_pred ----------------------------CCCCEEEEEeCCCcEEEE--eCCCCeEEeeecccCCCccEEEE-EEccCCCE
Q psy15157 252 ----------------------------SDGRIYCSGSKDGDIKIW--DGVSSKCVATFSKAHDGAEISSL-TFTRNGKY 300 (344)
Q Consensus 252 ----------------------------~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~i-~~~~~~~~ 300 (344)
++++++++++. +.++|| |..+++ +..+. .+. ..+..+ +++.+.-+
T Consensus 275 ~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~-~~~-~~~~~~~s~~~~~~~ 350 (662)
T 3azo_A 275 GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA-GPW-TEWAATLTVSGTRAV 350 (662)
T ss_dssp CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC-SSC-CEEEEEEEEETTEEE
T ss_pred CceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec-CCC-CeEEEEEecCCCEEE
Confidence 47888888888 999999 666665 45554 233 356666 44433323
Q ss_pred EEEEeCCC--cEEEEEcCCCeeEEEeec
Q psy15157 301 LLSSGKDS--LVKLWELSSARCLIAYTG 326 (344)
Q Consensus 301 l~s~~~dg--~i~vwd~~~~~~~~~~~~ 326 (344)
+++++.+. .|++||+.+++.......
T Consensus 351 ~~~~~~~~~~~i~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 351 GVAASPRTAYEVVELDTVTGRARTIGAR 378 (662)
T ss_dssp EEEEETTEEEEEEEEETTTCCEEEEESC
T ss_pred EEEcCCCCCCEEEEEECCCCceEEeecC
Confidence 34445554 466667777765443333
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.49 E-value=6.1e-12 Score=109.31 Aligned_cols=174 Identities=14% Similarity=0.107 Sum_probs=118.3
Q ss_pred CceEEEEECCCCCEEEEEeCC---Ce--EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 120 SPCRAGAFSIDGQLCATGSVD---AS--IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~d---g~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+..++|||||++|+.++.+ +. |.+|++.+ ........ +.. +..++|+|+++.|
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~------------------g~~~~l~~-~~~-~~~~~wspdg~~l 118 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET------------------LSSKKILE-AKN-IRSLEWNEDSRKL 118 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT------------------TEEEEEEE-ESE-EEEEEECTTSSEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC------------------CceEEEEc-CCC-ccceeECCCCCEE
Confidence 468889999999999987754 34 66667643 22222222 233 8999999999988
Q ss_pred EEEeCC---------------------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC--
Q psy15157 195 ASGSKD---------------------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF-- 245 (344)
Q Consensus 195 ~s~~~d---------------------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-- 245 (344)
+.++.+ ..|.+||+.+++....+.. . .+..+.|+|+| +++++..+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~---~-~~~~~~~spdg-~~~~~~~~~~~ 193 (347)
T 2gop_A 119 LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK---P-RFSSGIWHRDK-IVVNVPHREII 193 (347)
T ss_dssp EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE---E-TTCEEEEETTE-EEEEEECCCSS
T ss_pred EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC---C-CcccccCCCCe-EEEEEeccccc
Confidence 877642 5799999988764222322 2 67889999999 777664431
Q ss_pred -------EEEE-----------------EcCCCCEEEEEeCC--------CcEEEEeCCCCeEEeeecccCCCccEEE-E
Q psy15157 246 -------VLRL-----------------YSSDGRIYCSGSKD--------GDIKIWDGVSSKCVATFSKAHDGAEISS-L 292 (344)
Q Consensus 246 -------~i~~-----------------~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~-i 292 (344)
.+.. ++|+|+.++.++.+ ..|.+|| +++...... .+. ..+.. +
T Consensus 194 ~~~~~~~~l~~~d~~~~~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~-~~~-~~~~~~~ 269 (347)
T 2gop_A 194 PQYFKFWDIYIWEDGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD-EVD-RGVGQAK 269 (347)
T ss_dssp CCSSCCEEEEEEETTEEEEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST-TCC-SEEEEEE
T ss_pred ccccccccEEEeCCCceEEeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc-cCC-cccCCcc
Confidence 2221 26788888777654 3688888 555443332 333 45776 8
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 293 TFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 293 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.|+ ++ ++++++.++.+++| +.+++....+.
T Consensus 270 ~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~ 299 (347)
T 2gop_A 270 IKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK 299 (347)
T ss_dssp EET-TE-EEEEEEETTEEEEE-EESSSEEEEEC
T ss_pred EEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec
Confidence 999 88 88999999999999 88666544443
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.47 E-value=6e-12 Score=119.20 Aligned_cols=194 Identities=10% Similarity=-0.000 Sum_probs=129.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEE--eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeE--------
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATG--SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT-------- 183 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-------- 183 (344)
.+.+|...+..++|++++-++++. +.++...||..... .....+..|...+.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~ 79 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD------------------GAEESALPAPWNVRNRVFEYSG 79 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT------------------SCEEESSCTTCCBCCCGGGTCC
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC------------------CCcceeCCCCccccccccccCC
Confidence 356899999999999887777777 66889999986321 12334455554444
Q ss_pred -EEEEc--CCCCE-EEEEeC-CCcEEEEEcC--C-Cccccceeeec---cccceEEEEEecCCCEEEEEeCC--------
Q psy15157 184 -CLEFH--PSAPI-LASGSK-DKTVKMFDYS--K-SSVRKAHKTIQ---ESTFVRCLSFHPCGDYMVVGTDH-------- 244 (344)
Q Consensus 184 -~~~~~--~~~~~-l~s~~~-dg~i~iwd~~--~-~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~-------- 244 (344)
...|+ ||++. |+.++. +..|.+|++. . +.. ..+.... +...+..++|+|+|+.|++++.+
T Consensus 80 ~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 80 FPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred ccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 55565 99987 665543 5667777765 2 332 2221111 45568899999999999877654
Q ss_pred --CEEEE-----------------------------EcCCCCEEEEEeCC--------CcEEEEeCC-CC--eEEeeecc
Q psy15157 245 --FVLRL-----------------------------YSSDGRIYCSGSKD--------GDIKIWDGV-SS--KCVATFSK 282 (344)
Q Consensus 245 --~~i~~-----------------------------~~~~~~~l~~~~~d--------g~i~iwd~~-~~--~~~~~~~~ 282 (344)
..|.+ |+|||++|+.++.+ ..|++||+. ++ .....+..
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred ceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 23322 46788888877755 379999998 56 13333433
Q ss_pred cCCCccEEEEEEccCCCEEEEEeCCC--cEEEEEcCCCeeEEEeecC
Q psy15157 283 AHDGAEISSLTFTRNGKYLLSSGKDS--LVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 283 ~~~~~~v~~i~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~ 327 (344)
.+. ..+..+.|+|||+++++++.++ .|++||+.+++......++
T Consensus 239 ~~~-~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 239 GPE-EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp ETT-BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred CCC-ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence 333 4589999999999888888888 6777777677665444443
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.2e-13 Score=119.46 Aligned_cols=181 Identities=7% Similarity=0.002 Sum_probs=110.9
Q ss_pred CceEEEEECCCCCEEEEEeCC---CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC-eEEEEEcCCCCEEE
Q psy15157 120 SPCRAGAFSIDGQLCATGSVD---ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE-VTCLEFHPSAPILA 195 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~ 195 (344)
..+.+++|||||++|+.+... ..|.+||+.++ .. ..+..+... ...+.|+|+++.|+
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~------------------~~-~~l~~~~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ------------------QA-VQLTEGKGDNTFGGFISTDERAFF 96 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT------------------EE-EECCCSSCBCTTTCEECTTSSEEE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCC------------------cE-EEeecCCCCccccceECCCCCEEE
Confidence 347788999999998877543 36778887532 22 222222222 33478999999999
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEE-------------------EEEecCCCEEEEE-----eCCCEEE---
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC-------------------LSFHPCGDYMVVG-----TDHFVLR--- 248 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~~~~i~--- 248 (344)
.++.++.|++||+.+++....... +...... +.|+|+++.++++ ..+..+.
T Consensus 97 ~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d 174 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQVIYTV--DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVD 174 (396)
T ss_dssp EEETTTEEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEE
T ss_pred EEEcCCcEEEEECCCCCcEEEEec--ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEE
Confidence 999999999999988754332221 1111111 2344444332221 1111222
Q ss_pred -------------------EEcC-CCCEEEEEeCC------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEE
Q psy15157 249 -------------------LYSS-DGRIYCSGSKD------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLL 302 (344)
Q Consensus 249 -------------------~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 302 (344)
.|+| ++..++..+.+ ..|.+||...++...... ......+..+.|+|+|++|+
T Consensus 175 ~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 175 IETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMA 253 (396)
T ss_dssp TTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEE
T ss_pred CCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEE
Confidence 3578 78766665543 368899987665433332 22123588899999999877
Q ss_pred EEeCC-----CcEEEEEcCCCeeEE
Q psy15157 303 SSGKD-----SLVKLWELSSARCLI 322 (344)
Q Consensus 303 s~~~d-----g~i~vwd~~~~~~~~ 322 (344)
.++.+ +.|++||+.+++...
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (396)
T 3c5m_A 254 YVSYFKGQTDRVIYKANPETLENEE 278 (396)
T ss_dssp EEEEETTTCCEEEEEECTTTCCEEE
T ss_pred EEecCCCCccceEEEEECCCCCeEE
Confidence 76543 449999999886544
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6.3e-11 Score=99.02 Aligned_cols=177 Identities=8% Similarity=0.077 Sum_probs=125.5
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSIDGQLCA-TGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~-sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
...+++++++|++++ +.+.++.|.+|+..+... ......+...+.+++++++++++++..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~------------------~~~~~~~~~~p~~i~~~~~g~l~v~~~- 85 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT------------------TVLPFNGLYQPQGLAVDGAGTVYVTDF- 85 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----------------------EECCCCSCCSCCCEEECTTCCEEEEET-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc------------------ceEeeCCcCCcceeEECCCCCEEEEcC-
Confidence 778999999999777 557789999998753210 111122334677899999998766665
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCE
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRI 256 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~ 256 (344)
++.|.+||....... ... ......+..++++++|+.+++...++.+..| +++|++
T Consensus 86 ~~~i~~~d~~~~~~~-~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l 163 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQT-VLP-FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNV 163 (270)
T ss_dssp TTEEEEECTTCSCCE-ECC-CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCE
T ss_pred CCEEEEEeCCCceEe-eee-cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCE
Confidence 889999998765322 111 1223568899999999877766667777776 567887
Q ss_pred EEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 257 YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 257 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
+++...++.|.+||........... ... ..+.+++++++|.++++...++.|.+||..+...
T Consensus 164 ~v~~~~~~~i~~~~~~~~~~~~~~~-~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAESNNQVVLPF-TDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp EEEEGGGTEEEEECTTTCCEEECCC-SSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred EEEECCCCEEEEEecCCCceEeecc-cCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 7777778899999988766543322 221 3589999999998777777789999999976543
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-12 Score=115.24 Aligned_cols=178 Identities=10% Similarity=0.063 Sum_probs=117.1
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEE------------------
Q psy15157 123 RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTC------------------ 184 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~------------------ 184 (344)
..+.|+|||++|+.++.++.|++||+.++.. ......+......
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~------------------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~ 145 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEE------------------QVIYTVDEEWKGYGTWVANSDCTKLVGIEIL 145 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCE------------------EEEEECCTTEEEEEEEEECTTSSEEEEEEEE
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCc------------------EEEEecccccCCCCCEEEeccCCcccccccc
Confidence 3478999999999999999999999865321 1111112111111
Q ss_pred -EEEcCCCCEEEEE-----eCCCcEEEEEcCCCccccceeeeccccceEEEEEec-CCCEEEEEeCCC------EEE---
Q psy15157 185 -LEFHPSAPILASG-----SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP-CGDYMVVGTDHF------VLR--- 248 (344)
Q Consensus 185 -~~~~~~~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~------~i~--- 248 (344)
+.|+|+++.++.+ ..+..|.+||+.+++..... .+...+..+.|+| ++..|+..+.+. .+.
T Consensus 146 ~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d 222 (396)
T 3c5m_A 146 KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVN 222 (396)
T ss_dssp GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEE
T ss_pred ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEE
Confidence 3567888766543 45678999999887643322 3455688899999 787776654321 222
Q ss_pred ---------------------EEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEE
Q psy15157 249 ---------------------LYSSDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYL 301 (344)
Q Consensus 249 ---------------------~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l 301 (344)
.|+|+|+.|+.++.+ +.|++||+.+++...... . .+ .. +.|+| +|+++
T Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~-~~--~~-~~~s~~dg~~l 297 (396)
T 3c5m_A 223 EDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-M-PP--CS-HLMSNFDGSLM 297 (396)
T ss_dssp TTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-C-CS--EE-EEEECSSSSEE
T ss_pred CCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-C-CC--CC-CCccCCCCceE
Confidence 247889877766544 449999998886543322 1 11 33 88999 99988
Q ss_pred EEEe----------------CCCcEEEEEcCCCeeEEEeecC
Q psy15157 302 LSSG----------------KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 302 ~s~~----------------~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
++++ .++.|++||+.+++.. .+..+
T Consensus 298 ~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~ 338 (396)
T 3c5m_A 298 VGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKH 338 (396)
T ss_dssp EEEECCC----------CCCCCCEEEEEETTTTBCC-EEEEC
T ss_pred EEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCC
Confidence 8754 3478999999888753 34433
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=5.4e-10 Score=94.58 Aligned_cols=204 Identities=10% Similarity=0.051 Sum_probs=137.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
+..+...+.+++++++|+++++...++.|.+||.. +.. .......+...+.++++.+++.++
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-----------------~~~~~~~~~~~~~~i~~~~~g~l~ 71 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-----------------TEYPLPTPDAKVMCLTISSDGEVW 71 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-----------------EEEECSSTTCCEEEEEECTTSCEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-----------------EEecCCcccCceeeEEECCCCCEE
Confidence 34556789999999999988877778899999875 110 111122345678999999999988
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------c
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------S 251 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~ 251 (344)
++...++.|..||.. ++. ..+........+..++++++|..+++...++.+..| +
T Consensus 72 v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 72 FTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLG 149 (299)
T ss_dssp EEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEEC
T ss_pred EeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEc
Confidence 887778899999976 332 222222234568899999999877776666666655 4
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
++|+++++...++.|..||. +++...... ......+.+++++++|++.++...++.|.+||. +++.. .+.......
T Consensus 150 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~ 225 (299)
T 2z2n_A 150 SDNALWFTENQNNAIGRITE-SGDITEFKI-PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNA 225 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTC
T ss_pred CCCCEEEEeCCCCEEEEEcC-CCcEEEeeC-CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCC
Confidence 56666766666788999998 665543211 122235889999999997777767889999999 66643 343332223
Q ss_pred ceeeeeeeccC
Q psy15157 332 QQFELTLTVDA 342 (344)
Q Consensus 332 ~~~~~~~~~~~ 342 (344)
....+.+..++
T Consensus 226 ~~~~i~~~~~g 236 (299)
T 2z2n_A 226 RPHAITAGAGI 236 (299)
T ss_dssp CEEEEEECSTT
T ss_pred CceeEEECCCC
Confidence 33444444443
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.39 E-value=4.2e-11 Score=100.10 Aligned_cols=179 Identities=9% Similarity=0.011 Sum_probs=127.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s 196 (344)
+...+.+++++++|+++++.. ++.|.+||..... ...+. .....+.++++.+++.++++
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~-------------------~~~~~~~~~~~p~~i~~~~~g~l~v~ 124 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN-------------------QTVLPFDGLNYPEGLAVDTQGAVYVA 124 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC-------------------CEECCCCSCSSEEEEEECTTCCEEEE
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce-------------------EeeeecCCcCCCcceEECCCCCEEEE
Confidence 345788999999999777665 8899999975321 11111 22356889999999998888
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
...++.|.+|+..+.... .........+.+++++++|+.+++...++.|..| +++
T Consensus 125 ~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 202 (270)
T 1rwi_B 125 DRGNNRVVKLAAGSKTQT--VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEA 202 (270)
T ss_dssp EGGGTEEEEECTTCCSCE--ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTT
T ss_pred ECCCCEEEEEECCCceeE--eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCC
Confidence 778899999976544321 1111222356789999999866666666777776 567
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
|.++++...++.|.+||........... .+. ..+.+++++++|+++++...++.|+++++...+.
T Consensus 203 g~l~v~~~~~~~v~~~~~~~~~~~~~~~-~~~-~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 203 GTVYVTEHNTNQVVKLLAGSTTSTVLPF-TGL-NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCEEEEETTTSCEEEECTTCSCCEECCC-CSC-SCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCEEEEECCCCcEEEEcCCCCcceeecc-CCC-CCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 7777777778899999987654433221 221 3589999999999888888999999999876554
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.39 E-value=3.4e-12 Score=122.52 Aligned_cols=182 Identities=9% Similarity=0.029 Sum_probs=107.6
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc---------CCeEEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI---------EEVTCL 185 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~~ 185 (344)
+..|.+.+...+|||||+.||.++ |+.|++|++.++....... .......+.++. +....+
T Consensus 107 l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~---------~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 107 EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW---------TGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS---------CCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC---------CCCccceecCcccccccchhcCCCcce
Confidence 467788899999999999999884 7899999986532211000 000000111221 222458
Q ss_pred EEcCCCCEEEEEeCCC------------------------------------cEEEEEcCC---Cccccceeee------
Q psy15157 186 EFHPSAPILASGSKDK------------------------------------TVKMFDYSK---SSVRKAHKTI------ 220 (344)
Q Consensus 186 ~~~~~~~~l~s~~~dg------------------------------------~i~iwd~~~---~~~~~~~~~~------ 220 (344)
.|+|||+.|+.++.|. .|++||+.+ ++........
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~ 256 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASML 256 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCC
Confidence 9999999988876432 366677766 5211111111
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----EEeee---cccCCCccEE---
Q psy15157 221 QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK----CVATF---SKAHDGAEIS--- 290 (344)
Q Consensus 221 ~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~---~~~~~~~~v~--- 290 (344)
.+...+..++|+|+|+.++.... .++.+..|++||+.+++ +.... ...+. ..|.
T Consensus 257 ~~~~~~~~~~wspdg~~~~~~~~---------------r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~-~~v~~~~ 320 (740)
T 4a5s_A 257 IGDHYLCDVTWATQERISLQWLR---------------RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTT-GWVGRFR 320 (740)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEE---------------SSTTEEEEEEEEEETTTTEEEECGGGCEEEECSS-SCSSSSS
T ss_pred CCCeEEEEEEEeCCCeEEEEEeC---------------CCCCEEEEEEEECCCCccccceeEEEEeeeccCC-ceEccCc
Confidence 14455777777777665443211 11233479999998886 32211 11222 2333
Q ss_pred --EEEEccCCCEEE-EEe-CCC--cEEEEEcCCCeeEE
Q psy15157 291 --SLTFTRNGKYLL-SSG-KDS--LVKLWELSSARCLI 322 (344)
Q Consensus 291 --~i~~~~~~~~l~-s~~-~dg--~i~vwd~~~~~~~~ 322 (344)
.+.|+|||+.|+ ..+ .+| .|++||+.+++...
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred CCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 678999999876 555 333 58889988766543
|
| >2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.1e-13 Score=80.30 Aligned_cols=61 Identities=34% Similarity=0.647 Sum_probs=57.1
Q ss_pred ccccCCcHHHHHhHHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCCCCCchHHHHHHHhhhc
Q psy15157 4 QNEQKSSAEVLRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLA 65 (344)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~ 65 (344)
++|++.++..++.|++||+++++||.+||+.++|..|...+.+.+ |.|++||.+++..++.
T Consensus 3 ~~~~~~~~~~iK~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~~-c~PSdrL~~iv~~gl~ 63 (66)
T 2xz2_A 3 RDEILDPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQ-CAPSERLLHVMIAGMQ 63 (66)
T ss_dssp GGCCCCTTCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCCC-CCCCCHHHHHHHHHHH
T ss_pred CccccCchhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCC-CCcHHHHHHHHHHHhh
Confidence 568889999999999999999999999999999999999999888 9999999999998764
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.1e-11 Score=105.49 Aligned_cols=177 Identities=10% Similarity=0.015 Sum_probs=120.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
+++.+++++...++++|+.++ +++|++............ ........ .+.. |+.++| ++.+|+++ .+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~-------~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~ 105 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDST-------PLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TR 105 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSC-------CCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccc-------cccceEEe-eCCC-eeEEEE--CCCEEEEE-cC
Confidence 689999999999999999885 666998654311110000 01111111 3555 999999 88899988 88
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
+.|++||+.+...... ...+...+.++.+.+. .+++++.||.|.+||+.++.... +
T Consensus 106 ~~l~v~dv~sl~~~~~--~~~~~~~v~~i~~~~p---------------------~~av~~~dG~L~v~dl~~~~~~~-~ 161 (388)
T 1xip_A 106 NALYSLDLEELSEFRT--VTSFEKPVFQLKNVNN---------------------TLVILNSVNDLSALDLRTKSTKQ-L 161 (388)
T ss_dssp SEEEEEESSSTTCEEE--EEECSSCEEEEEECSS---------------------EEEEEETTSEEEEEETTTCCEEE-E
T ss_pred CcEEEEEchhhhccCc--cceeecceeeEEecCC---------------------CEEEEECCCCEEEEEccCCcccc-c
Confidence 9999999987643222 2233445655554431 15578899999999999887653 2
Q ss_pred cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee--EEEeecC-------CCcCceeeeeeecc
Q psy15157 281 SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC--LIAYTGA-------GSMGQQFELTLTVD 341 (344)
Q Consensus 281 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~ 341 (344)
. ..|++++|+|+| ++.|..||++++|+...++. ..++... ++....+++.+..+
T Consensus 162 ~-----~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 162 A-----QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp E-----ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred c-----CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence 1 259999999999 67899999999999988876 6667321 12355666666544
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.37 E-value=5.4e-10 Score=93.92 Aligned_cols=200 Identities=13% Similarity=0.086 Sum_probs=145.0
Q ss_pred EecCC-CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-cCCeEEEEEcCCCC
Q psy15157 115 VTSHK-SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH-IEEVTCLEFHPSAP 192 (344)
Q Consensus 115 ~~~h~-~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~ 192 (344)
+..+. ..+++++++|+|+++++ .++.|..||. + ++.+..+..+ ...+.++.+.++|+
T Consensus 31 ~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~------------------G~~~W~~~~~~~~~~~~~~~~~dG~ 89 (276)
T 3no2_A 31 YPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-D------------------GRELWNIAAPAGCEMQTARILPDGN 89 (276)
T ss_dssp EECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-T------------------SCEEEEEECCTTCEEEEEEECTTSC
T ss_pred eCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-C------------------CCEEEEEcCCCCccccccEECCCCC
Confidence 33444 47899999999999983 4778999987 3 3344455443 34688999999999
Q ss_pred EEEEEeC-CCcEEEEEcCCCccccceeeec----cccceEEEEEecCCCEEEEEeCCCEEEEE-----------------
Q psy15157 193 ILASGSK-DKTVKMFDYSKSSVRKAHKTIQ----ESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------- 250 (344)
Q Consensus 193 ~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------- 250 (344)
.+++.+. ++.|..+|. +++....+.... +......+++.++|+++++...++.+..|
T Consensus 90 ~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~~ 168 (276)
T 3no2_A 90 ALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTPF 168 (276)
T ss_dssp EEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCCC
T ss_pred EEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCcc
Confidence 9999887 788888885 555444443211 11234456788999999999888988887
Q ss_pred ----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC----CCccEEEEEEccCCCEEEEEeCC--------CcEEEEE
Q psy15157 251 ----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH----DGAEISSLTFTRNGKYLLSSGKD--------SLVKLWE 314 (344)
Q Consensus 251 ----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~i~~~~~~~~l~s~~~d--------g~i~vwd 314 (344)
.++|+++++++.++.|..+|..+++.+..+.... .-..+.++...++|+.+++.... +..++++
T Consensus 169 ~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~ 248 (276)
T 3no2_A 169 SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVE 248 (276)
T ss_dssp EEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEE
T ss_pred ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEE
Confidence 4567788888888899999999999988875321 11347889999999988887421 2446777
Q ss_pred c-CCCeeEEEeecCCCcCceeee
Q psy15157 315 L-SSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 315 ~-~~~~~~~~~~~~~~~~~~~~~ 336 (344)
+ ++|+.+-+|......++...+
T Consensus 249 ~~~~g~~~W~~~~~~~~~~~~~~ 271 (276)
T 3no2_A 249 IDSEGKVVWQLNDKVKFGMISTI 271 (276)
T ss_dssp ECTTSBEEEEECCTTTSCCCCEE
T ss_pred ECCCCCEEEEecCcccccceeee
Confidence 7 689999999888776665554
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.36 E-value=4.6e-11 Score=104.37 Aligned_cols=138 Identities=14% Similarity=0.090 Sum_probs=104.0
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
...+.. |+.++| ++++|+++ .++.|++||+.+.. .......|...+.++.+.+.. +
T Consensus 84 ~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~------------------~~~~~~~~~~~v~~i~~~~p~--~ 139 (388)
T 1xip_A 84 EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS------------------EFRTVTSFEKPVFQLKNVNNT--L 139 (388)
T ss_dssp EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT------------------CEEEEEECSSCEEEEEECSSE--E
T ss_pred EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh------------------ccCccceeecceeeEEecCCC--E
Confidence 345777 999999 89999999 88999999997531 122344566778888877653 8
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++++.||.|.+||+.++.... ....|+|++|+|+| ++ .|..||.+++|+...+
T Consensus 140 av~~~dG~L~v~dl~~~~~~~------~~~~Vs~v~WSpkG--~~-------------------vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 140 VILNSVNDLSALDLRTKSTKQ------LAQNVTSFDVTNSQ--LA-------------------VLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEEETTSEEEEEETTTCCEEE------EEESEEEEEECSSE--EE-------------------EEETTSCEEEEEEETT
T ss_pred EEEECCCCEEEEEccCCcccc------ccCCceEEEEcCCc--eE-------------------EEEcCCcEEEEcCCCc
Confidence 889999999999998765421 34579999999976 33 5778889999988777
Q ss_pred eE--Eeeecc--------cCCCccEEEEEEccCCCEEEEE
Q psy15157 275 KC--VATFSK--------AHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 275 ~~--~~~~~~--------~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+. ..++.. .+ ...|.+|.|.+++.++++-
T Consensus 193 ~~~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 193 EMEKQFEFSLPSELEELPVE-EYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEEEECCCHHHHTSCTT-TSEEEEEEESSSSEEEEEE
T ss_pred cccccceecCCcccccccCC-CeeEEEEEEecCCeEEEEE
Confidence 65 444521 13 3579999999999998873
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-09 Score=89.88 Aligned_cols=185 Identities=9% Similarity=0.051 Sum_probs=128.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.+...+.+++++++|+++++...++.|..||.... .....+......+.++++.+++.++++
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~------------------~~~~~~~~~~~~~~~i~~~~~g~l~v~ 115 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI------------------IKEYTLPNPDSAPYGITEGPNGDIWFT 115 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC------------------EEEEECSSTTCCEEEEEECTTSCEEEE
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc------------------EEEEeCCCcCCCceeeEECCCCCEEEE
Confidence 34578999999999998888777889999987411 011112234557899999999988888
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
...++.|.+||. +++.. .+........+..++++++|..+++...++.+..| +++
T Consensus 116 ~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~ 193 (299)
T 2z2n_A 116 EMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGND 193 (299)
T ss_dssp ETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT
T ss_pred ecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCC
Confidence 777899999998 54432 22222234568899999999877766555666554 456
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
|.++++...++.|.+||. +++... +........+.+++++++|++.++...++.|..||. +++ +..+.
T Consensus 194 g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~ 261 (299)
T 2z2n_A 194 DALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYP 261 (299)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEE
T ss_pred CCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEe
Confidence 776666666788999998 665433 221212245899999999997776667889999998 454 34443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-10 Score=111.24 Aligned_cols=188 Identities=14% Similarity=0.047 Sum_probs=121.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCC-----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVD-----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
+|...+..++|||||++||.++.+ ..|++||+.++. .+.. ..+...+..++|+||
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~------------------~~~~-~~~~~~~~~~~wspD- 219 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK------------------PLAD-ELKWVKFSGLAWLGN- 219 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC------------------EEEE-EEEEEESCCCEESTT-
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC------------------CCCc-cCCCceeccEEEECC-
Confidence 444578899999999999887654 359999997532 1111 111122357899999
Q ss_pred CEEEEEeCCCc--------------EEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeCCC-----EEEEE
Q psy15157 192 PILASGSKDKT--------------VKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTDHF-----VLRLY 250 (344)
Q Consensus 192 ~~l~s~~~dg~--------------i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~-----~i~~~ 250 (344)
+.|+.++.|+. |++|++.++......... .+...+..+.|+|+|++|+..+.++ .+.+|
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~ 299 (741)
T 1yr2_A 220 DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVA 299 (741)
T ss_dssp SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEE
T ss_pred CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEE
Confidence 88887776654 899998776532222211 1223578899999999988776433 45444
Q ss_pred ------------------------cCCCCEEEEEeCC----CcEEEEeCCCC-eEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 251 ------------------------SSDGRIYCSGSKD----GDIKIWDGVSS-KCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 251 ------------------------~~~~~~l~~~~~d----g~i~iwd~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+++|..|+..+.+ +.|.+||+.++ .....+...+. ..+..+.|+ ++.++
T Consensus 300 d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~l~~~~~~-~~~lv 377 (741)
T 1yr2_A 300 RVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESK-DNLESVGIA-GNRLF 377 (741)
T ss_dssp EEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCS-SEEEEEEEE-BTEEE
T ss_pred ECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCC-CeEEEEEEE-CCEEE
Confidence 3456666666553 45999998874 23333332333 357788887 66778
Q ss_pred EEEeCCCcEEEEEcC-CCeeEEEeec
Q psy15157 302 LSSGKDSLVKLWELS-SARCLIAYTG 326 (344)
Q Consensus 302 ~s~~~dg~i~vwd~~-~~~~~~~~~~ 326 (344)
++...|+..+||.+. +++.+..+..
T Consensus 378 ~~~~~dg~~~l~~~~~~g~~~~~l~~ 403 (741)
T 1yr2_A 378 ASYIHDAKSQVLAFDLDGKPAGAVSL 403 (741)
T ss_dssp EEEEETTEEEEEEEETTSCEEEECBC
T ss_pred EEEEECCEEEEEEEeCCCCceeeccC
Confidence 888889987777654 4666666654
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.4e-10 Score=97.69 Aligned_cols=177 Identities=10% Similarity=0.037 Sum_probs=125.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.....+.+. +++++++...++.|.+||..+ .+.+.++. .......+++++++.++++...
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t------------------~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~ 103 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINT------------------FKEVGRIT-GFTSPRYIHFLSDEKAYVTQIW 103 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTT------------------CCEEEEEE-CCSSEEEEEEEETTEEEEEEBS
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcc------------------cEEEEEcC-CCCCCcEEEEeCCCeEEEEECC
Confidence 346777774 456666677789999999864 33444443 3456889999888865555558
Q ss_pred CCcEEEEEcCCCccccceeeec---cccceEEEEEecCCCEEEEEe--CCCEEEEE----------------------cC
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQ---ESTFVRCLSFHPCGDYMVVGT--DHFVLRLY----------------------SS 252 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~--~~~~i~~~----------------------~~ 252 (344)
++.|.+||..+++....+.... .......+++ ++..++++. .++.|.++ ++
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~ 181 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDK 181 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECT
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcC
Confidence 9999999999876554443221 0013445666 455666555 37777776 67
Q ss_pred CCCEEEEEeCC----------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 253 DGRIYCSGSKD----------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 253 ~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
+|++++++..+ +.|.+||..+++....+.... +.....++|+|++++|+++.. .|.+||+.+++..
T Consensus 182 dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 182 YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 88887777655 789999999998876665221 235789999999999988765 8999999988764
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=2.6e-10 Score=99.75 Aligned_cols=181 Identities=9% Similarity=0.140 Sum_probs=120.4
Q ss_pred CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----------CCCcEEEEEc
Q psy15157 139 VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS----------KDKTVKMFDY 208 (344)
Q Consensus 139 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~ 208 (344)
.|+.|.+||..+ .+.+..+..+..+ .++|+|+++++++++ .++.|.+||.
T Consensus 29 ~d~~v~v~D~~t------------------~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 29 TESRVHVYDYTN------------------GKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGCEEEEEETTT------------------CCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred ccCeEEEEECCC------------------CeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 478999999854 3344555555554 899999999888876 3678999999
Q ss_pred CCCccccceeeec----cccceEEEEEecCCCEEEEEeC--CCEEEEEcCC-----------------------CCEEEE
Q psy15157 209 SKSSVRKAHKTIQ----ESTFVRCLSFHPCGDYMVVGTD--HFVLRLYSSD-----------------------GRIYCS 259 (344)
Q Consensus 209 ~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~~~-----------------------~~~l~~ 259 (344)
.+.+....+.... +......++++|+|++++++.. ++.+.+|+.. ...+++
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMT 168 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEE
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEE
Confidence 8876655444321 1234566899999999999874 5778777432 145566
Q ss_pred EeCCCcEEEEeCCC-CeEEe------eec------------------------------ccCCC----------------
Q psy15157 260 GSKDGDIKIWDGVS-SKCVA------TFS------------------------------KAHDG---------------- 286 (344)
Q Consensus 260 ~~~dg~i~iwd~~~-~~~~~------~~~------------------------------~~~~~---------------- 286 (344)
.+.||.+.+|+... ++... .+. .....
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKA 248 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccc
Confidence 77788888887654 33220 000 00000
Q ss_pred -----ccEEEEEEccCCCEEEEEeC-----------CCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 287 -----AEISSLTFTRNGKYLLSSGK-----------DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 287 -----~~v~~i~~~~~~~~l~s~~~-----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.....++|+|+++.++++.. .+.|.+||+.+++.+.++..+. ...+.+++|++
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~ 317 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRN 317 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTT
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCC
Confidence 00011688999888877643 3479999999999999998876 45566666653
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.33 E-value=9.4e-10 Score=93.92 Aligned_cols=206 Identities=8% Similarity=0.061 Sum_probs=132.4
Q ss_pred ecCCCceEEEEECCCCCEEEE-------EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE--EecCCcCCeEEEE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCAT-------GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR--TLYDHIEEVTCLE 186 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~s-------g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~ 186 (344)
...-....+++|+++|+++++ +..++.|.+||..++.... .. ...++...+.+++
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~----------------~~~~~~~~~~~~~~~i~ 77 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV----------------ICKPEVNGYGGIPAGCQ 77 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE----------------EECCEETTEECCEEEEE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE----------------EEecccCCCCCCCceEE
Confidence 344456789999999998888 6778999999975421110 00 0112456789999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEEcCCCccccc-eeee--ccccceEEEEEecCCCEEEEEeCC---------------CEE
Q psy15157 187 FHPS-APILASGSKDKTVKMFDYSKSSVRKA-HKTI--QESTFVRCLSFHPCGDYMVVGTDH---------------FVL 247 (344)
Q Consensus 187 ~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~--~~~~~v~~~~~~~~~~~l~~~~~~---------------~~i 247 (344)
++++ +.++++. ..+.|.+||.. ++.... .... .....+.+++++++|+++++...+ +.+
T Consensus 78 ~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 78 CDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp ECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred EecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeE
Confidence 9999 6655554 44579999987 554322 1111 112457889999999877766543 334
Q ss_pred EEE---------------------c----CCCCEEE-EEeCCCcEEEEeCC-CCeE-----EeeecccCCCccEEEEEEc
Q psy15157 248 RLY---------------------S----SDGRIYC-SGSKDGDIKIWDGV-SSKC-----VATFSKAHDGAEISSLTFT 295 (344)
Q Consensus 248 ~~~---------------------~----~~~~~l~-~~~~dg~i~iwd~~-~~~~-----~~~~~~~~~~~~v~~i~~~ 295 (344)
..| + ++++.++ +...++.|.+||.. +++. ...+. .+....+..++++
T Consensus 156 ~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d 234 (314)
T 1pjx_A 156 YCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFD 234 (314)
T ss_dssp EEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEB
T ss_pred EEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-CCCCCCCCceEEC
Confidence 333 5 7775544 44567889999976 4432 12222 1110357889999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 296 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
++|+++++...++.|.+||..+++.+..+..+.. ....+.+++++
T Consensus 235 ~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~--~~~~i~~~~dg 279 (314)
T 1pjx_A 235 EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE--KPSNLHFKPQT 279 (314)
T ss_dssp TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS--CEEEEEECTTS
T ss_pred CCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC--CceeEEECCCC
Confidence 9999888887889999999988887777765532 33444444444
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.33 E-value=7.2e-11 Score=101.94 Aligned_cols=172 Identities=8% Similarity=0.058 Sum_probs=121.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|.+++|++++..++..+.++.++.|.- .....+..+...+.+++|++++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 64 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---------------------EPWLEISKKGLQLEGLNFDRQGQLFLLDVF 64 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---------------------EEEEEEESSCCCEEEEEECTTSCEEEEETT
T ss_pred cccceeeecCCccceeEEeecccCccccc---------------------ceeEEEeccCccccCcEECCCCCEEEEECC
Confidence 35777888888877777778888998832 234556667777899999999998888889
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC----CEEEEE-------------------------
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----FVLRLY------------------------- 250 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~~------------------------- 250 (344)
++.|.+||..+++..... ......+.+++++++|+++++...+ +.+.+|
T Consensus 65 ~~~i~~~d~~~~~~~~~~--~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 142 (333)
T 2dg1_A 65 EGNIFKINPETKEIKRPF--VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVF 142 (333)
T ss_dssp TCEEEEECTTTCCEEEEE--ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEE
T ss_pred CCEEEEEeCCCCcEEEEe--eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEE
Confidence 999999999877543222 1345679999999999877776655 456555
Q ss_pred cCCCCEEEEEeC------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE-EeCCCcEEEEEcCC
Q psy15157 251 SSDGRIYCSGSK------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS-SGKDSLVKLWELSS 317 (344)
Q Consensus 251 ~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s-~~~dg~i~vwd~~~ 317 (344)
+++|+++++... .+.|..||..+++...... .. ..+..++|+|+|++|+. .+.++.|++||+.+
T Consensus 143 d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 143 DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NI--SVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EE--SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CC--CcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 456666665443 2456666765554433222 11 24789999999986654 45678999999964
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.2e-09 Score=99.16 Aligned_cols=190 Identities=13% Similarity=0.090 Sum_probs=130.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc----CCCCEEE
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH----PSAPILA 195 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~l~ 195 (344)
..+..+.|+|||+++++++.|+.|.+||+.. .+.+.+..+.... ....++|+ |+|++++
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~----------------~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~ 259 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWM----------------KEPTTVAEIKIGS-EARSIETSKMEGWEDKYAI 259 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTS----------------SSCCEEEEEECCS-EEEEEEECCSTTCTTTEEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCC----------------CCCcEeEEEecCC-CCceeEEccccCCCCCEEE
Confidence 4577999999999999999999999999841 1133444554332 35789999 6999777
Q ss_pred EEeC-CCcEEEEEcCCCccccceeeec--------c-ccceEEEEEecCCCEEEEEe-CCCEEE----------------
Q psy15157 196 SGSK-DKTVKMFDYSKSSVRKAHKTIQ--------E-STFVRCLSFHPCGDYMVVGT-DHFVLR---------------- 248 (344)
Q Consensus 196 s~~~-dg~i~iwd~~~~~~~~~~~~~~--------~-~~~v~~~~~~~~~~~l~~~~-~~~~i~---------------- 248 (344)
+++. +++|.++|..+.+....+.... + ...+..+..++++..+++.. ..+.+.
T Consensus 260 v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~ 339 (567)
T 1qks_A 260 AGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS 339 (567)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE
T ss_pred EEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee
Confidence 6655 5999999998877655544321 1 12566777787766554443 223332
Q ss_pred --------EEcCCCCEEEEEe-CCCcEEEEeCCCCeEEeeecc----cCCCccEEEEEEccCCCEEE-EEe-CCCcEEEE
Q psy15157 249 --------LYSSDGRIYCSGS-KDGDIKIWDGVSSKCVATFSK----AHDGAEISSLTFTRNGKYLL-SSG-KDSLVKLW 313 (344)
Q Consensus 249 --------~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~i~~~~~~~~l~-s~~-~dg~i~vw 313 (344)
.|+++|+++++++ .++.|.++|..+++.+..+.. .|.+..++ -++|++..++ ++. .++.|.++
T Consensus 340 ~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~--~~~p~~g~v~~t~~~g~~~Vsvi 417 (567)
T 1qks_A 340 AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN--FVHPTFGPVWATSHMGDDSVALI 417 (567)
T ss_dssp CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE--EEETTTEEEEEEEBSSSSEEEEE
T ss_pred ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee--eECCCCCcEEEeCCCCCCeEEEe
Confidence 3689999887665 578899999999988776653 23222232 2688755554 443 46899999
Q ss_pred EcCC-------CeeEEEeecCC
Q psy15157 314 ELSS-------ARCLIAYTGAG 328 (344)
Q Consensus 314 d~~~-------~~~~~~~~~~~ 328 (344)
|..+ .+.+.++...+
T Consensus 418 d~~~~~~~~~~~kvv~~i~~~g 439 (567)
T 1qks_A 418 GTDPEGHPDNAWKILDSFPALG 439 (567)
T ss_dssp ECCTTTCTTTBTSEEEEEECSC
T ss_pred cCCCCCCccccCEEEEEEecCC
Confidence 9988 66788887653
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.2e-10 Score=98.84 Aligned_cols=185 Identities=10% Similarity=-0.018 Sum_probs=123.6
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-----CCeEEEEEcCCCC
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-----EEVTCLEFHPSAP 192 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~ 192 (344)
....+..++++++++++++...++.|.+||..+.. ....+.... .....+++ .++.
T Consensus 82 ~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~------------------~~~~i~~g~~~~~~~~p~~i~~-~~~~ 142 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE------------------ITGYIECPDMDMESGSTEQMVQ-YGKY 142 (328)
T ss_dssp CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE------------------EEEEEECTTCCTTTCBCCCEEE-ETTE
T ss_pred CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe------------------EEEEEEcCCccccCCCcceEEE-ECCE
Confidence 34678999999988666655589999999986532 222222111 13446666 3444
Q ss_pred EEEEEe-CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC----------CEEEEE-----------
Q psy15157 193 ILASGS-KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----------FVLRLY----------- 250 (344)
Q Consensus 193 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~i~~~----------- 250 (344)
++++.. .++.|.+||..+++....+.. ......+.++|+|++++++..+ +.+.++
T Consensus 143 lyv~~~~~~~~v~viD~~t~~~~~~i~~---g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 143 VYVNCWSYQNRILKIDTETDKVVDELTI---GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp EEEEECTTCCEEEEEETTTTEEEEEEEC---SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCCEEEEEECCCCeEEEEEEc---CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE
Confidence 444443 489999999998865544432 2335678889998876666543 566665
Q ss_pred -------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEcc-CCCEEEEE----eCCCcEEE
Q psy15157 251 -------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR-NGKYLLSS----GKDSLVKL 312 (344)
Q Consensus 251 -------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~----~~dg~i~v 312 (344)
+|+++.++++.. .|.+||..+++..........+.....++++| ++++.++. ..++.|.+
T Consensus 220 ~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v 297 (328)
T 3dsm_A 220 KFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR 297 (328)
T ss_dssp ECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred ecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEE
Confidence 566777776654 89999998887542111111124588999999 56656665 57899999
Q ss_pred EEcCCCeeEEEeecC
Q psy15157 313 WELSSARCLIAYTGA 327 (344)
Q Consensus 313 wd~~~~~~~~~~~~~ 327 (344)
||.. |+.+.++.-.
T Consensus 298 ~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 298 YSPQ-GKLIDEFYVG 311 (328)
T ss_dssp ECTT-CCEEEEEEEE
T ss_pred ECCC-CCEEEEEEec
Confidence 9998 9999988753
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-08 Score=86.60 Aligned_cols=182 Identities=12% Similarity=0.027 Sum_probs=126.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.....+.++++.++|++.++...++.|.+||.. +.. ....+..+...+.++++.+++.++++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-----------------~~~~~~~~~~~~~~i~~~~~g~l~v~ 78 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-----------------KEFEVPTPDAKVMCLIVSSLGDIWFT 78 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-----------------EEEECSSTTCCEEEEEECTTSCEEEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-----------------EEEECCCCCCcceeEEECCCCCEEEE
Confidence 345688999999999988887778999999875 111 01112233467889999999998887
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
...++.|..||.. ++. ..+........+.+++++++|.++++...++.+..+ +++
T Consensus 79 ~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 79 ENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp ETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTT
T ss_pred ecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCC
Confidence 7778899999987 543 222222233568899999999877776556666554 456
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeE
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 321 (344)
|+++++...++.|..||. +++... +........+.+++++++|++.++....+.|.+||. +++..
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 776666656778888887 554433 221222245889999999987777767788999998 55443
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.26 E-value=4.8e-09 Score=92.00 Aligned_cols=71 Identities=7% Similarity=0.148 Sum_probs=56.6
Q ss_pred cCCCCEEEEEeC----------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCC
Q psy15157 251 SSDGRIYCSGSK----------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSG-KDSLVKLWELSSA 318 (344)
Q Consensus 251 ~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~-~dg~i~vwd~~~~ 318 (344)
+++++.++++.. ++.|.++|..+++.+..+.... ...++.|+|||+ .++++. .++.|.+||+.++
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 556666655443 3579999999999988886433 478999999999 777777 5899999999999
Q ss_pred eeEEEe
Q psy15157 319 RCLIAY 324 (344)
Q Consensus 319 ~~~~~~ 324 (344)
+.+..+
T Consensus 352 ~vv~~i 357 (373)
T 2mad_H 352 DQDQST 357 (373)
T ss_pred CEEeee
Confidence 999885
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=8.6e-10 Score=105.30 Aligned_cols=180 Identities=9% Similarity=0.004 Sum_probs=119.8
Q ss_pred eEEEEECCCCCEEEEEeCCCe----------------EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEE
Q psy15157 122 CRAGAFSIDGQLCATGSVDAS----------------IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~----------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 185 (344)
+..++|+|||+.|+.++.++. |++|++.+.... ...+.....|...+..+
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~--------------~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE--------------DILCAEFPDEPKWMGGA 238 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG--------------CEEEECCTTCTTCEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc--------------ceEEeccCCCCeEEEEE
Confidence 677999999999999888766 999998643110 01222223355668899
Q ss_pred EEcCCCCEEEEEeC-----CCcEEEEEcCC------CccccceeeeccccceEEEEEecCCCEEEEEeCCC----EEEEE
Q psy15157 186 EFHPSAPILASGSK-----DKTVKMFDYSK------SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF----VLRLY 250 (344)
Q Consensus 186 ~~~~~~~~l~s~~~-----dg~i~iwd~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~i~~~ 250 (344)
.|+|+|++|+.++. +..|++||+.+ +.. .......+...+.. .|+|+|+.|+..+..+ .+.+|
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 99999998877664 56899999976 421 11122223333333 4778888776655422 34443
Q ss_pred ---------------------------cCCCCEEEEEeCCCc--EEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE
Q psy15157 251 ---------------------------SSDGRIYCSGSKDGD--IKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 251 ---------------------------~~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
++++.++++...|+. |.+||+.+++.+..+... ...+..+.++|+++.+
T Consensus 317 d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~--~~~v~~~~~s~d~~~l 394 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE--VGSVVGYSGQKKDTEI 394 (710)
T ss_dssp ETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC--SSEEEEEECCTTCSEE
T ss_pred eCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC--CceEEEEecCCCCCEE
Confidence 345666777777774 667787777766666533 3468899999998766
Q ss_pred EEE----eCCCcEEEEEcCCCe
Q psy15157 302 LSS----GKDSLVKLWELSSAR 319 (344)
Q Consensus 302 ~s~----~~dg~i~vwd~~~~~ 319 (344)
+.. ...+.|++||+.+++
T Consensus 395 ~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 395 FYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEeCCCCCCEEEEEECCCCc
Confidence 533 245789999999887
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.25 E-value=9.7e-09 Score=87.19 Aligned_cols=191 Identities=10% Similarity=0.059 Sum_probs=127.7
Q ss_pred ecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 116 TSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+..-..+..|+++ +.++++...++.|..||..+. . ...+ .....+.+++++++++++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~------------------~-~~~~-~~~~~~~~i~~~~dG~l~ 68 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK------------------Q-VQRV-TMDAPVSSVALRQSGGYV 68 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC------------------C-EEEE-ECSSCEEEEEEBTTSSEE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCC------------------c-EEEE-eCCCceEEEEECCCCCEE
Confidence 344456678899985 556777777899999998642 1 1111 234678999999999955
Q ss_pred EEEeCCCcEEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeC-----------CCEEEE------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTD-----------HFVLRL------------ 249 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----------~~~i~~------------ 249 (344)
++ . ++.|.+||..+++........ .....+..++++|+|++++.... .+.+..
T Consensus 69 v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~ 146 (297)
T 3g4e_A 69 AT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD 146 (297)
T ss_dssp EE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE
T ss_pred EE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee
Confidence 54 4 578999999876543222211 12345788999999996664421 122222
Q ss_pred ---------EcCCCCEE-EEEeCCCcEEEEeC--CCCeEE--eeecc-cCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 250 ---------YSSDGRIY-CSGSKDGDIKIWDG--VSSKCV--ATFSK-AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 250 ---------~~~~~~~l-~~~~~dg~i~iwd~--~~~~~~--~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
|+++++.+ ++.+.++.|.+||+ .++... ..+.. ......+..++++++|++.++....+.|.+||
T Consensus 147 ~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 147 QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 37888755 45566788999986 455431 11111 11123578999999998888877788899999
Q ss_pred cCCCeeEEEeecCC
Q psy15157 315 LSSARCLIAYTGAG 328 (344)
Q Consensus 315 ~~~~~~~~~~~~~~ 328 (344)
..+|+.+..+..+.
T Consensus 227 ~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 227 PVTGKRLQTVKLPV 240 (297)
T ss_dssp TTTCCEEEEEECSS
T ss_pred CCCceEEEEEECCC
Confidence 99999998887664
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.3e-09 Score=90.94 Aligned_cols=181 Identities=13% Similarity=0.122 Sum_probs=119.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~ 192 (344)
.+..+...+.+++++++|+++++...++.|.+||..++.... ....... ....+.+++++|+|+
T Consensus 63 ~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~---------------~~~~~~~~~~~~~~~i~~d~~G~ 127 (296)
T 3e5z_A 63 PEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES---------------IADSFEGKKLNSPNDVCLAPDGS 127 (296)
T ss_dssp EEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE---------------EECEETTEECCCCCCEEECTTSC
T ss_pred EEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE---------------EeeccCCCCCCCCCCEEECCCCC
Confidence 345677889999999999988888778899999985421110 0000111 123467899999999
Q ss_pred EEEEEeC-----------------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----
Q psy15157 193 ILASGSK-----------------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----- 250 (344)
Q Consensus 193 ~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----- 250 (344)
++++.+. .+.|..++.. ++.. ...........++|+|+|+.+++.+.++.+.+|
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~---~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~ 203 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS---APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNAR 203 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE---EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSS
T ss_pred EEEECCccccccccccccccccCCCcEEEEECCC-CCEE---EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCC
Confidence 8887321 2455555544 3321 223344567889999999988666555666555
Q ss_pred ----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEE-ccCCCEEEEEeCC
Q psy15157 251 ----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF-TRNGKYLLSSGKD 307 (344)
Q Consensus 251 ----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~-~~~~~~l~s~~~d 307 (344)
+++|+++++. ++.|.+||.. ++.+..+.. +. . +.+++| .|+++.|++++.+
T Consensus 204 g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~-~~-~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 204 GETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT-PQ-T-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp SCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC-SS-C-CCEEEEESTTSCEEEEEETT
T ss_pred CcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC-CC-C-ceeEEEECCCCCEEEEEcCC
Confidence 3455555444 7889999986 766666653 32 3 788999 5899999988875
Q ss_pred CcEEEEEcCCCee
Q psy15157 308 SLVKLWELSSARC 320 (344)
Q Consensus 308 g~i~vwd~~~~~~ 320 (344)
.+..++..+.+.
T Consensus 278 -~l~~~~~~~~~~ 289 (296)
T 3e5z_A 278 -EFWSIETNVRGL 289 (296)
T ss_dssp -EEEEEECSCCBC
T ss_pred -eEEEEEcccccc
Confidence 455566665544
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-08 Score=84.70 Aligned_cols=202 Identities=8% Similarity=-0.016 Sum_probs=131.7
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.+...+.++++.++|+++++...++.|..||.. +. .....+......+.++++.+++.++++
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~-----------------~~~~~~~~~~~~~~~i~~~~~g~l~v~ 120 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG-----------------FTEYPLPQPDSGPYGITEGLNGDIWFT 120 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-----------------EEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC-----------------eEEecCCCCCCCCccceECCCCCEEEE
Confidence 344679999999999988887778889999875 11 011122223467889999999998888
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
...++.|..||.. ++.. .+........+..++++++|+..++...++.+..+ +++
T Consensus 121 ~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 121 QLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGND 198 (300)
T ss_dssp ETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT
T ss_pred ccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCC
Confidence 7778899999987 4432 22222234568899999999866555545666555 456
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCce
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 333 (344)
|.++++....+.|.+||. +++...... ......+.+++++++|++.++...++.|..||. +++. ..+.........
T Consensus 199 g~l~v~~~~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~ 274 (300)
T 2qc5_A 199 GALWFVEIMGNKIGRITT-TGEISEYDI-PTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTI-QEYQLQTENAEP 274 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCE-EEEECCSTTCCC
T ss_pred CCEEEEccCCCEEEEEcC-CCcEEEEEC-CCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcE-EEEECCccCCcc
Confidence 666666556677899987 444333211 112245889999999997777667789999998 4543 344332222233
Q ss_pred eeeeeeccC
Q psy15157 334 FELTLTVDA 342 (344)
Q Consensus 334 ~~~~~~~~~ 342 (344)
..+....++
T Consensus 275 ~~i~~~~~g 283 (300)
T 2qc5_A 275 HGITFGKDG 283 (300)
T ss_dssp CCEEECTTS
T ss_pred ceeEeCCCC
Confidence 444444443
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3.8e-09 Score=97.49 Aligned_cols=175 Identities=11% Similarity=0.088 Sum_probs=121.2
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 129 IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 129 ~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
+.+.++++...+++|.++|..+ .+.+.++.. ...+..+.|+|+++++++++.|+.|.+||+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t------------------~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~ 225 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGST------------------YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDL 225 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTT------------------CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred CCceEEEEeCCCCeEEEEECCC------------------CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEEC
Confidence 4456777888899999999864 344444432 235668999999999999999999999999
Q ss_pred C--CCccccceeeeccccceEEEEEe----cCCCEEEEEeC-CCEEEEEcCC----------------------------
Q psy15157 209 S--KSSVRKAHKTIQESTFVRCLSFH----PCGDYMVVGTD-HFVLRLYSSD---------------------------- 253 (344)
Q Consensus 209 ~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-~~~i~~~~~~---------------------------- 253 (344)
. +.+....+. .......++|+ |+|+++++++. .+.+.+++..
T Consensus 226 ~~~t~~~v~~i~---~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~ 302 (567)
T 1qks_A 226 WMKEPTTVAEIK---IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA 302 (567)
T ss_dssp TSSSCCEEEEEE---CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE
T ss_pred CCCCCcEeEEEe---cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEE
Confidence 5 554433332 23446789999 69999988764 4677776311
Q ss_pred -------CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCeeEEEee
Q psy15157 254 -------GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 254 -------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~ 325 (344)
..+++....+|.|.++|....+........ .+.....+.|+|+|+++++++ .++.|.++|+.+++.+..+.
T Consensus 303 i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~ 381 (567)
T 1qks_A 303 ILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 381 (567)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe
Confidence 122333344577888887665322211111 123477889999999987765 67889999999999887775
Q ss_pred c
Q psy15157 326 G 326 (344)
Q Consensus 326 ~ 326 (344)
-
T Consensus 382 v 382 (567)
T 1qks_A 382 T 382 (567)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.22 E-value=1.9e-09 Score=93.93 Aligned_cols=187 Identities=12% Similarity=0.036 Sum_probs=115.2
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-------cCCeEEEE
Q psy15157 124 AGAFSIDGQLCATGS----------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH-------IEEVTCLE 186 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~ 186 (344)
.++++|||+++++++ .++.|.+||..+. +.+.++.-. ...-..++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~------------------~v~~~I~v~~g~r~~~g~~P~~~a 143 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL------------------LPTADIELPDAPRFLVGTYPWMTS 143 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC------------------CEEEEEEETTCCCCCBSCCGGGEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC------------------eEEEEEECCCccccccCCCCceEE
Confidence 399999999877765 3678999999653 333333211 12345689
Q ss_pred EcCCCCEEEEEeC--CCcEEEEEcCCCccccceeeecc-----ccceEEEEEecCCCEEEEEeCC-CEE-----------
Q psy15157 187 FHPSAPILASGSK--DKTVKMFDYSKSSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTDH-FVL----------- 247 (344)
Q Consensus 187 ~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~-~~i----------- 247 (344)
++|+|++++.+.. ++.|.++|+.+++....+..... ...-.-++.+++|+++++.... +.+
T Consensus 144 ~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~ 223 (386)
T 3sjl_D 144 LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE 223 (386)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT
T ss_pred EcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccc
Confidence 9999998887764 68999999999876555432110 0000012445555555554432 222
Q ss_pred --------------------------EEE-----------------------------------cCCCCEEEEEeC----
Q psy15157 248 --------------------------RLY-----------------------------------SSDGRIYCSGSK---- 262 (344)
Q Consensus 248 --------------------------~~~-----------------------------------~~~~~~l~~~~~---- 262 (344)
.+. +++++.++....
T Consensus 224 ~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 224 DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred cccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccc
Confidence 111 122233322211
Q ss_pred ------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEE-eCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 263 ------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSS-GKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 263 ------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
...|.++|+.+++.+..+... ..+.+|.+++|++ +|+++ ..++.|.++|..+++.+.+++..+.+.
T Consensus 304 ~~hk~~~~~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~ 377 (386)
T 3sjl_D 304 WRHKTASRFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP 377 (386)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSC
T ss_pred cccCCCCCEEEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCc
Confidence 123555555555555555432 2477999999997 66665 458999999999999999998776553
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.3e-09 Score=91.87 Aligned_cols=174 Identities=9% Similarity=0.092 Sum_probs=112.4
Q ss_pred cCCCceEEEEECCCCCEEEEEeCC---------------------------CeEEEEEcCCccccccCCCCCCcCCCCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVD---------------------------ASIKILDVDRMLAKSSMESSEPQNDQQGH 169 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~d---------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (344)
.+.. +..++|+|||+.|+.++.+ ..|.+||+.++
T Consensus 102 ~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~------------------ 162 (347)
T 2gop_A 102 EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE------------------ 162 (347)
T ss_dssp EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT------------------
T ss_pred cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC------------------
Confidence 3344 9999999999988887643 46888887532
Q ss_pred ceEEEecCCcCCeEEEEEcCCCCEEEEEeCCC-------cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe
Q psy15157 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDK-------TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 170 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 242 (344)
..+..+.. . .+..++|+|++ ++++++.++ ...||.+.+++.. .+. .+ ..+..+ +|+|++|+.++
T Consensus 163 ~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~--~~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 163 EVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMF--EK-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEE--EE-ESEEEE--EECSSCEEEEE
T ss_pred eEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-Eec--cC-cceeeE--CCCCCEEEEEE
Confidence 22122332 3 67899999999 888876652 4455555444322 221 22 344443 89999887766
Q ss_pred CCC--------EEEE----------------------EcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEE
Q psy15157 243 DHF--------VLRL----------------------YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSL 292 (344)
Q Consensus 243 ~~~--------~i~~----------------------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i 292 (344)
.+. .+.+ |+ ++ ++++++.++.+++| +.+++...... +. ..|.++
T Consensus 234 ~~~~~~~~~~~~l~~~d~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~--~~-~~v~~~ 307 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK--GR-HWIMGF 307 (347)
T ss_dssp CCSSSCCCSSCEEEEECSSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEEC--SS-SEEEEE
T ss_pred ccccCCccccceEEEECCCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec--CC-CeEEee
Confidence 332 3333 45 66 78888999999999 87665543332 23 469999
Q ss_pred EEccCCCEEEEEeCCCcE-EEEEcCCCeeEEEeecCC
Q psy15157 293 TFTRNGKYLLSSGKDSLV-KLWELSSARCLIAYTGAG 328 (344)
Q Consensus 293 ~~~~~~~~l~s~~~dg~i-~vwd~~~~~~~~~~~~~~ 328 (344)
+|+| .++++++.++.. .+|.+. ++ ...+..+.
T Consensus 308 ~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n 340 (347)
T 2gop_A 308 DVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYN 340 (347)
T ss_dssp EESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTT
T ss_pred eeeC--cEEEEEcCCCChHHheEeC-Cc-EEEecccc
Confidence 9999 677777777665 777776 54 44555543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-08 Score=89.35 Aligned_cols=185 Identities=11% Similarity=0.057 Sum_probs=119.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.....++|+++++++++...++.|++||..+. ........ ..... ++|+++++.|+++..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g------------------~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~ 190 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN------------------KVTTVHPG-FKGGK-PAVTKDKQRVYSIGW 190 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT------------------EEEEEEET-CCBCB-CEECTTSSEEEEEBS
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC------------------EEEEeecc-CCCCc-eeEecCCCcEEEEec
Confidence 46889999999998888888899999998642 11222222 22233 899999998888887
Q ss_pred CC--cEEEEEcCCCcccccee-eec-cccceEEEEEecCCCEEEEEeCCCEEEEEc------------------------
Q psy15157 200 DK--TVKMFDYSKSSVRKAHK-TIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------------ 251 (344)
Q Consensus 200 dg--~i~iwd~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------------ 251 (344)
++ .|.+||...+....... ... ....+.+++++|++..|+++..++.+..|+
T Consensus 191 ~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 191 EGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp STTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred CCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 66 78888876543311110 001 334567789999655666666666666552
Q ss_pred -----C-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-------------CCccEEEEEEccCCCEEEEEe-CCCcEE
Q psy15157 252 -----S-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-------------DGAEISSLTFTRNGKYLLSSG-KDSLVK 311 (344)
Q Consensus 252 -----~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~i~~~~~~~~l~s~~-~dg~i~ 311 (344)
| ++.++++-..++.|+.|+.... +..+.... .-.....++++++|+++++-+ .++.|+
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 3 2344444455566777775533 12221111 012478999999999877777 889999
Q ss_pred EEEcCCCeeEEEeecC
Q psy15157 312 LWELSSARCLIAYTGA 327 (344)
Q Consensus 312 vwd~~~~~~~~~~~~~ 327 (344)
.|++.+++. .++.++
T Consensus 349 ~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 349 KLDILDGYV-STVAGQ 363 (409)
T ss_dssp EEETTTTEE-EEEEEC
T ss_pred EEECCCCEE-EEEeCC
Confidence 999888864 455444
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.1e-09 Score=95.16 Aligned_cols=181 Identities=11% Similarity=0.049 Sum_probs=119.0
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-------CcCCeEEEE
Q psy15157 124 AGAFSIDGQLCATGS----------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-------HIEEVTCLE 186 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~~~ 186 (344)
.++++|||++++++. .++.|.++|..+. +.+.++.- .......++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~------------------~vv~~I~v~g~~r~~~g~~P~~~~ 183 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF------------------LPIADIELPDAPRFLVGTYQWMNA 183 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC------------------CEEEEEEETTCCCCCBSCCGGGSE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC------------------cEEEEEECCCccccccCCCcceEE
Confidence 899999999887775 3678999998653 23333211 012234678
Q ss_pred EcCCCCEEEEEeC--CCcEEEEEcCCCccccceeeecc-----ccceEEEEEecCCCEEEEE------------------
Q psy15157 187 FHPSAPILASGSK--DKTVKMFDYSKSSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVG------------------ 241 (344)
Q Consensus 187 ~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~------------------ 241 (344)
++|++++++.+.. ++.|.+.|+.+.+....+..... ...-.-+.++++|+.+++.
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~ 263 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED 263 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC
Confidence 9999998888764 57899999988776544432110 0000113344444433332
Q ss_pred -------------------eCCCEEEE-----------------------------------EcCCCCEEEEEeC-----
Q psy15157 242 -------------------TDHFVLRL-----------------------------------YSSDGRIYCSGSK----- 262 (344)
Q Consensus 242 -------------------~~~~~i~~-----------------------------------~~~~~~~l~~~~~----- 262 (344)
+..+.+.+ ++++++.+++...
T Consensus 264 ~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g 343 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW 343 (426)
T ss_dssp SCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred CceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence 22222222 2344455544432
Q ss_pred -----CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCeeEEEee
Q psy15157 263 -----DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLSSG-KDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 263 -----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~-~dg~i~vwd~~~~~~~~~~~ 325 (344)
++.|.++|..+.+.+..+.... ...++.|+|||+ ++++.. .++.|.++|+.+++.+.++.
T Consensus 344 thk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~ 410 (426)
T 3c75_H 344 KHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVD 410 (426)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred cccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEec
Confidence 3469999999999988886433 478999999999 888887 59999999999999999983
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.7e-09 Score=102.94 Aligned_cols=178 Identities=11% Similarity=-0.051 Sum_probs=114.8
Q ss_pred EEEEECCCCCEEEEEeCCCe-------------EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 123 RAGAFSIDGQLCATGSVDAS-------------IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~-------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..++|+|||+.|+.++.|.. |++|++.+.... ...+.....|...+..+.|+|
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~--------------~~lv~~~~~~~~~~~~~~~Sp 236 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK--------------DTVVHERTGDPTTFLQSDLSR 236 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG--------------CEEEECCCCCTTCEEEEEECT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh--------------ceEEEecCCCCEEEEEEEECC
Confidence 67899999999999998876 999999653110 112333345666789999999
Q ss_pred CCCEEEEEeCCC----cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC----CCEEEEEcC---------
Q psy15157 190 SAPILASGSKDK----TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD----HFVLRLYSS--------- 252 (344)
Q Consensus 190 ~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~~~i~~~~~--------- 252 (344)
+|++|+.++.++ .|.+||..++... ....+...+....+ ++|. +++.+. ++.|.+|+.
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~---~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 311 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFR---LLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWK 311 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCE---EEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCE
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceE---EeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCe
Confidence 999887777665 6777765444322 12223333444455 4555 444433 355555521
Q ss_pred -----------------CCCEEEEEeCCCcEEEEeCC-CCeEEeeecccCCCccEEEEEEccCCCEEEEE----eCCCcE
Q psy15157 253 -----------------DGRIYCSGSKDGDIKIWDGV-SSKCVATFSKAHDGAEISSLTFTRNGKYLLSS----GKDSLV 310 (344)
Q Consensus 253 -----------------~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~----~~dg~i 310 (344)
++.++++...|+..++|.+. +++....+.... ...+..+.++|+++.|+.. ...+.|
T Consensus 312 ~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~v 390 (695)
T 2bkl_A 312 EIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPG-VGAASNLMGLEDLDDAYYVFTSFTTPRQI 390 (695)
T ss_dssp EEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSS-SSEECCCBSCTTCSEEEEEEEETTEEEEE
T ss_pred EEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEE
Confidence 34566777888887777554 355555554222 3467888899999877632 345789
Q ss_pred EEEEcCCCee
Q psy15157 311 KLWELSSARC 320 (344)
Q Consensus 311 ~vwd~~~~~~ 320 (344)
++||+.+++.
T Consensus 391 ~~~d~~~g~~ 400 (695)
T 2bkl_A 391 YKTSVSTGKS 400 (695)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 9999988763
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=7.3e-09 Score=98.56 Aligned_cols=183 Identities=14% Similarity=0.150 Sum_probs=114.3
Q ss_pred cCCCceEEEEECCCCCEEEE-----EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEE-EecCCcCCeEEEEEcCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCAT-----GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-TLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~s-----g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~ 190 (344)
+|...+..++|||||+++|- |+....|++||+.++ +.+. .+.. .....++|+ |
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg------------------~~~~~~~~~--~k~~~~~Ws-D 184 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK------------------QPLETPLKD--VKFSGISWL-G 184 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC------------------SEEEEEEEE--EESCCCEEE-T
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC------------------CCCccccCC--ceeccEEEe-C
Confidence 46668899999999998884 333457999999753 1111 1111 112467899 9
Q ss_pred CCEEEEEeCCCc-------------EEEEEcCCCccccc--eeeec-cccceEEEEEecCCCEEEEEeC----CCEEEEE
Q psy15157 191 APILASGSKDKT-------------VKMFDYSKSSVRKA--HKTIQ-ESTFVRCLSFHPCGDYMVVGTD----HFVLRLY 250 (344)
Q Consensus 191 ~~~l~s~~~dg~-------------i~iwd~~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~~~----~~~i~~~ 250 (344)
++.|+.++.+.. |++|++.++..... +.... +......+.|+|+|++|+.... ...+.++
T Consensus 185 g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~ 264 (693)
T 3iuj_A 185 NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVK 264 (693)
T ss_dssp TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEE
T ss_pred CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEE
Confidence 998888887743 99999987643222 21111 2335678999999999876542 2355554
Q ss_pred -----------------------cCCCCEEE-EEeCC---CcEEEEeCCCCeE--EeeecccCCCccEEEEEEccCCCEE
Q psy15157 251 -----------------------SSDGRIYC-SGSKD---GDIKIWDGVSSKC--VATFSKAHDGAEISSLTFTRNGKYL 301 (344)
Q Consensus 251 -----------------------~~~~~~l~-~~~~d---g~i~iwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l 301 (344)
+++|..|+ ....+ +.|..+|+.++.. ...+..+ ... +. .|++++++|
T Consensus 265 d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~-~~--~~s~~g~~l 340 (693)
T 3iuj_A 265 DLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE-RQQ-VL--TVHSGSGYL 340 (693)
T ss_dssp ETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSS-CE--EEEEETTEE
T ss_pred ECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-CCC-EE--EEEEECCEE
Confidence 33444443 33333 5788899887653 2233322 222 33 788899988
Q ss_pred EEEeC-CC--cEEEEEcCCCeeEEEee
Q psy15157 302 LSSGK-DS--LVKLWELSSARCLIAYT 325 (344)
Q Consensus 302 ~s~~~-dg--~i~vwd~~~~~~~~~~~ 325 (344)
+.... ++ .|++||+..+ ....+.
T Consensus 341 v~~~~~~g~~~l~~~d~~g~-~~~~l~ 366 (693)
T 3iuj_A 341 FAEYMVDATARVEQFDYEGK-RVREVA 366 (693)
T ss_dssp EEEEEETTEEEEEEECTTSC-EEEEEC
T ss_pred EEEEEECCeeEEEEEECCCC-eeEEee
Confidence 77654 43 6899998754 444443
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.9e-07 Score=80.38 Aligned_cols=183 Identities=10% Similarity=0.015 Sum_probs=120.6
Q ss_pred ceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
...+..|+++ +.++++...++.|..||..++ . ...+. ....+.+++|+++++++++. .
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~------------------~-~~~~~-~~~~v~~i~~~~dg~l~v~~-~ 108 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASG------------------R-KTVHA-LPFMGSALAKISDSKQLIAS-D 108 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTT------------------E-EEEEE-CSSCEEEEEEEETTEEEEEE-T
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCC------------------c-EEEEE-CCCcceEEEEeCCCeEEEEE-C
Confidence 4567889997 456667777899999998632 1 11121 23578999999999877654 4
Q ss_pred CCcEEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeC--------------CCEEE------------EEc
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTD--------------HFVLR------------LYS 251 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~--------------~~~i~------------~~~ 251 (344)
+ .|.+||..+++........ .....+..++++|+|++++.... ++.+. .|+
T Consensus 109 ~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s 187 (326)
T 2ghs_A 109 D-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFS 187 (326)
T ss_dssp T-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEEC
T ss_pred C-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEc
Confidence 4 4999998877643221111 11245889999999986665432 12221 147
Q ss_pred CCCCEEEE-EeCCCcEEEEeCC--CC-eE-----EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEE
Q psy15157 252 SDGRIYCS-GSKDGDIKIWDGV--SS-KC-----VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLI 322 (344)
Q Consensus 252 ~~~~~l~~-~~~dg~i~iwd~~--~~-~~-----~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 322 (344)
++|+.++. .+.++.|.+||.. ++ .. ...+. .. ...+..++++++|++.++...++.|.+||. +++.+.
T Consensus 188 ~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~-~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 188 PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST-GI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT-TS-SSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred CCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECC-CC-CCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEE
Confidence 88876544 4557889999985 55 31 22221 11 235788999999998777767788999998 677777
Q ss_pred EeecCC
Q psy15157 323 AYTGAG 328 (344)
Q Consensus 323 ~~~~~~ 328 (344)
.+..+.
T Consensus 265 ~i~~~~ 270 (326)
T 2ghs_A 265 RYEVPG 270 (326)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 776553
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.07 E-value=3.8e-08 Score=83.86 Aligned_cols=178 Identities=10% Similarity=0.075 Sum_probs=115.4
Q ss_pred CCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCcccccc-CCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 118 HKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSS-MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
+...+.+++++++ |+++++.. ++.|.+||.. +..... ... . .......+.++++++++++++
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~-------~-------~~~~~~~~~~i~~d~~g~l~v 132 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKD-------S-------EGRRMQGCNDCAFDYEGNLWI 132 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBC-------T-------TSCBCBCCCEEEECTTSCEEE
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEecc-------C-------CCccccCCcCEEECCCCCEEE
Confidence 5567999999999 77555554 4478899875 221110 000 0 001224578999999998887
Q ss_pred EEeCC---------------CcEEEEEcCCCccccceeeeccccceEEEEEe----cCCCEEEEEe-CCCEEEEE-----
Q psy15157 196 SGSKD---------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH----PCGDYMVVGT-DHFVLRLY----- 250 (344)
Q Consensus 196 s~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~-~~~~i~~~----- 250 (344)
+...+ +.|..||.. ++.... .........++++ |+++.++++. .++.+..|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~---~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 133 TAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV---DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp EECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE---EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET
T ss_pred EecCcccccccccccccCCCCeEEEECCC-CCEEEe---ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC
Confidence 77655 567777754 432211 1223346778899 9887665553 34444444
Q ss_pred -------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE-E
Q psy15157 251 -------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS-S 304 (344)
Q Consensus 251 -------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s-~ 304 (344)
+++|+++++...++.|.+||..+++.+..+... . ..+.+++|+++|++|+. .
T Consensus 209 g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~-~-~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 209 AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP-F-EKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS-S-SCEEEEEECTTSSEEEEEE
T ss_pred CccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC-C-CCceeEEECCCCCEEEEEe
Confidence 456777777777889999998877665555422 2 35899999999995554 4
Q ss_pred eCCCcEEEEEcCC
Q psy15157 305 GKDSLVKLWELSS 317 (344)
Q Consensus 305 ~~dg~i~vwd~~~ 317 (344)
..++.|..|++..
T Consensus 287 ~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 287 HENNAVWKFEWQR 299 (314)
T ss_dssp TTTTEEEEEECSS
T ss_pred CCCCeEEEEeCCC
Confidence 5668899999864
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=6e-11 Score=104.13 Aligned_cols=173 Identities=13% Similarity=0.074 Sum_probs=100.4
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
++..+++++.||.|+.||..++.. +-.+.. +.+.+..+..++..+++++.||.|+.||..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~------------------~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI------------------KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE------------------EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE------------------EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECC
Confidence 578899999999999999875432 223332 334444455677788888899999999998
Q ss_pred CCccccceeeeccccceE-EEEEecCCCEEEEEeCCCEEEEE-------------------cCCCCEEEEEeCCCcEEEE
Q psy15157 210 KSSVRKAHKTIQESTFVR-CLSFHPCGDYMVVGTDHFVLRLY-------------------SSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~i~~~-------------------~~~~~~l~~~~~dg~i~iw 269 (344)
+++.......... ..+. +..+. .+..+++++.++.+..| +|++..+++++.|+.|+.|
T Consensus 68 tG~~~w~~~~~~~-~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~ 145 (369)
T 2hz6_A 68 NNEGLTKLPFTIP-ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMY 145 (369)
T ss_dssp --CCSEECSCCHH-HHHTTCSCC------CCCCEEEEEEEEECCC----------------------EEEEEEEEEEECC
T ss_pred CCceeeeeeccCc-cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEE
Confidence 8765433221100 0000 00001 23455666666666665 3456788889999999999
Q ss_pred eCCCCeEEeeecccCCCccEEEEEEccCC---CEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 270 DGVSSKCVATFSKAHDGAEISSLTFTRNG---KYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~~~v~~i~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
|.++++.+..+.... .....++.+. ..+++++.||.|+.||.++|+.+.++....
T Consensus 146 d~~tG~~~W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 203 (369)
T 2hz6_A 146 DTKTRELRWNATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS 203 (369)
T ss_dssp CSSSSSCCCEEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS
T ss_pred ECCCCCEEEeEeccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 999998765553211 1223334332 457778899999999999999988877443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.03 E-value=1.9e-07 Score=79.08 Aligned_cols=167 Identities=14% Similarity=0.150 Sum_probs=108.9
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec--CCcCCeEEEEEcCCCCEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY--DHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~ 195 (344)
+...+.+++++++|+++++. ++.|.+||.+++... .+.... .....+++++++|+|++++
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~----------------~~~~~~~~~~~~~~~di~~d~dG~l~~ 113 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV----------------VLATVDNDKKNNRFNDGKVDPAGRYFA 113 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE----------------EEEECCTTCSSEEEEEEEECTTSCEEE
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE----------------EEEecCCCCCCCCCCCEEECCCCCEEE
Confidence 45689999999999966554 567999998643211 111111 1234578999999999776
Q ss_pred EEeCC---------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE---------------
Q psy15157 196 SGSKD---------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY--------------- 250 (344)
Q Consensus 196 s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~--------------- 250 (344)
+...+ ..-.+|.+....... ...........++|+|+++.++++. .++.|..|
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~d~~g~~~--~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~ 191 (297)
T 3g4e_A 114 GTMAEETAPAVLERHQGALYSLFPDHHVK--KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSV 191 (297)
T ss_dssp EEEECCSBTTBCCTTCEEEEEECTTSCEE--EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEE
T ss_pred ecCCcccccccccCCCcEEEEEECCCCEE--EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEE
Confidence 54322 234555554321111 1122334467899999999776543 34555444
Q ss_pred ---------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEEeC
Q psy15157 251 ---------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSSGK 306 (344)
Q Consensus 251 ---------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~~~ 306 (344)
+++|+++++...++.|..||..+++.+..+.... ..+++++|. |+++.|+.++.
T Consensus 192 ~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~--~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 192 YKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV--DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS--SBEEEEEEESGGGCEEEEEEB
T ss_pred EECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC--CCceEEEEeCCCCCEEEEEcC
Confidence 4677777777777889999999899888876432 358999998 88887766553
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.01 E-value=5.4e-08 Score=82.88 Aligned_cols=170 Identities=15% Similarity=0.198 Sum_probs=111.4
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~ 192 (344)
.+..+...+..++++++|+++++...++.|.+|+.+ +.... ......+ ....+.++++.++|.
T Consensus 80 ~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~---------------~~~~~~~~~~~~~~~i~~d~dG~ 143 (305)
T 3dr2_A 80 VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL---------------LVGRYAGKRLNSPNDLIVARDGA 143 (305)
T ss_dssp EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE---------------EECEETTEECSCCCCEEECTTSC
T ss_pred EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE---------------EEeccCCCccCCCCCEEECCCCC
Confidence 345567789999999999977776667889999874 11000 0001111 123467899999999
Q ss_pred EEEE----EeC-------------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC------CEEEE
Q psy15157 193 ILAS----GSK-------------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH------FVLRL 249 (344)
Q Consensus 193 ~l~s----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~ 249 (344)
+++| |.. .+.|..||..+++..... .......++|+|+++.++++... +.|..
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~ 219 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITA 219 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----EESSEEEEEECTTSSEEEEEECCC---CCCEEEE
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEE
Confidence 8886 332 256777887666543221 23346789999999988887664 56665
Q ss_pred E--------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 250 Y--------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 250 ~--------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
| +++|+++ +++.+ .|.+||. .++.+..+.... .+.+++|.++++.|+.
T Consensus 220 ~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g~~~~~~~~~~---~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 220 FAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-DGQLLGHIPTPG---TASNCTFDQAQQRLFI 293 (305)
T ss_dssp EEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-TSCEEEEEECSS---CCCEEEECTTSCEEEE
T ss_pred EEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-CCCEEEEEECCC---ceeEEEEeCCCCEEEE
Confidence 5 4556644 34444 4889997 566666665322 3788999999998888
Q ss_pred EeCCCc
Q psy15157 304 SGKDSL 309 (344)
Q Consensus 304 ~~~dg~ 309 (344)
++.++.
T Consensus 294 t~~~~l 299 (305)
T 3dr2_A 294 TGGPCL 299 (305)
T ss_dssp EETTEE
T ss_pred EcCCeE
Confidence 886543
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.3e-07 Score=80.47 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=122.2
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+..+........|+++|+ +++++..++.|..|+... . ...+..+...+..++++++|+
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-------------------~-~~~~~~~~~~~~gl~~d~dG~ 98 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-------------------T-VDVLLDATAFTNGNAVDAQQR 98 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-------------------C-EEEEEESCSCEEEEEECTTSC
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-------------------C-EEEEeCCCCccceeeECCCCC
Confidence 3445666788899999998 667777889999998731 1 233444566789999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeec--cccceEEEEEecCCCEEEE----EeC-------------CCEEE-----
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQ--ESTFVRCLSFHPCGDYMVV----GTD-------------HFVLR----- 248 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~----~~~-------------~~~i~----- 248 (344)
++++...++.|.+||.. ++......... ....+..++++++|+++++ |+. .+.|.
T Consensus 99 l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 99 LVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred EEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 77665566889999975 44322111111 1123567888898887774 211 12222
Q ss_pred ----------------EEcCCCCEEEEEeCC------CcEEEEeCCCCeEE--eeecccCCCccEEEEEEccCCCEEEEE
Q psy15157 249 ----------------LYSSDGRIYCSGSKD------GDIKIWDGVSSKCV--ATFSKAHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 249 ----------------~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
.|+++++.++.+... +.|.+||+..+... ..+..... .....++++++|++ .++
T Consensus 178 ~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~-~~pdgi~~d~~G~l-wv~ 255 (305)
T 3dr2_A 178 GSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD-GLPDGFCVDRGGWL-WSS 255 (305)
T ss_dssp SCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS-SCCCSEEECTTSCE-EEC
T ss_pred CCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC-CCCCeEEECCCCCE-EEe
Confidence 247788877666655 68999998754311 11111111 23567899999994 444
Q ss_pred eCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 305 GKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 305 ~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+.+| |.+|+. .++.+..+..+.
T Consensus 256 ~~~g-v~~~~~-~g~~~~~~~~~~ 277 (305)
T 3dr2_A 256 SGTG-VCVFDS-DGQLLGHIPTPG 277 (305)
T ss_dssp CSSE-EEEECT-TSCEEEEEECSS
T ss_pred cCCc-EEEECC-CCCEEEEEECCC
Confidence 4444 999998 677888877654
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.00 E-value=1.9e-08 Score=87.51 Aligned_cols=78 Identities=5% Similarity=0.013 Sum_probs=60.4
Q ss_pred EcCCCCEEEEEeC---------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCE-EEEEe-CCCcEEEEEcCCC
Q psy15157 250 YSSDGRIYCSGSK---------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY-LLSSG-KDSLVKLWELSSA 318 (344)
Q Consensus 250 ~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~s~~-~dg~i~vwd~~~~ 318 (344)
++++++.++.+.. ++.+.++|+.+.+.+..+..+. ....+.|+|||++ +++.. .++.|.++|+.++
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 5677777776533 2356699999999998886433 4789999999984 55666 5999999999999
Q ss_pred eeEEEeecCCCc
Q psy15157 319 RCLIAYTGAGSM 330 (344)
Q Consensus 319 ~~~~~~~~~~~~ 330 (344)
+.+.+++....+
T Consensus 348 kvv~~I~vg~~P 359 (368)
T 1mda_H 348 QDQSSVELDKGP 359 (368)
T ss_dssp EEEEECCCCSCC
T ss_pred cEEEEEECCCCC
Confidence 999999865443
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.4e-07 Score=81.75 Aligned_cols=178 Identities=10% Similarity=0.025 Sum_probs=118.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeC-----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec------CCcCCeEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSV-----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY------DHIEEVTCL 185 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~ 185 (344)
+|-..+..++|+++|+++++-.. ++.|.+||+.++. .+..+. .+...+..+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~------------------~~~~~~~~~~~~~~~~~~~~v 125 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ------------------LSRVIYLPPPITLSNSFVNDL 125 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE------------------EEEEEECCTTTSCTTCCCCEE
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe------------------EEEEEECChhhcccccccceE
Confidence 56678999999999987766543 5789999986532 122221 123456889
Q ss_pred EEcCCCC-EEEEEe---CCCcEEEEEcCCCccccceee-------------ec--------------cccceEEEEEecC
Q psy15157 186 EFHPSAP-ILASGS---KDKTVKMFDYSKSSVRKAHKT-------------IQ--------------ESTFVRCLSFHPC 234 (344)
Q Consensus 186 ~~~~~~~-~l~s~~---~dg~i~iwd~~~~~~~~~~~~-------------~~--------------~~~~v~~~~~~~~ 234 (344)
++++++. .+++-. .++.|.+||+.+++....... .+ ....+..++|+|+
T Consensus 126 ~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d 205 (343)
T 2qe8_A 126 AVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE 205 (343)
T ss_dssp EEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT
T ss_pred EEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC
Confidence 9998654 556655 678999999987654322100 00 0123678999999
Q ss_pred CCEEEEEeCCC-EEE---------------------------------EEcCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 235 GDYMVVGTDHF-VLR---------------------------------LYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 235 ~~~l~~~~~~~-~i~---------------------------------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
|+.++++...+ .+. .++++|.++++...++.|.+||..+++.....
T Consensus 206 g~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~ 285 (343)
T 2qe8_A 206 NEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLV 285 (343)
T ss_dssp SCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEE
Confidence 99888876443 111 13678888988888999999998566643333
Q ss_pred cccCCCccEEEEEEccCCCEEEEEeCCCcEEEE
Q psy15157 281 SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313 (344)
Q Consensus 281 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vw 313 (344)
... ....+.+++|.++++++++.+..+.+.+|
T Consensus 286 ~~~-~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 286 TDE-KLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp ECG-GGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred ECC-ceecCCeeEECCCCcEEEEeCcccccccc
Confidence 211 12358999999999988887765554433
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.93 E-value=6.2e-08 Score=92.92 Aligned_cols=186 Identities=9% Similarity=-0.005 Sum_probs=113.7
Q ss_pred eEEEEECCCCCEEEEEeCCCe--------------EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE
Q psy15157 122 CRAGAFSIDGQLCATGSVDAS--------------IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF 187 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg~--------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 187 (344)
+..++|+|| +.|+.++.|+. |++|++.+.... ...+.....+...+..+.|
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~--------------~~lv~~~~~~~~~~~~~~~ 275 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA--------------DQPVFATPELPKRGHGASV 275 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGG--------------CEEEECCTTCTTCEEEEEE
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchh--------------CEEEeccCCCCeEEEEEEE
Confidence 357899999 98888887654 888888542110 1122222334445889999
Q ss_pred cCCCCEEEEEeCCC-----cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC----CEEEEEcC------
Q psy15157 188 HPSAPILASGSKDK-----TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH----FVLRLYSS------ 252 (344)
Q Consensus 188 ~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~i~~~~~------ 252 (344)
+|+|++|+..+.++ .|++||+.++..........+....... ++|+|+.|+..+.. +.+.+|+.
T Consensus 276 SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 354 (741)
T 1yr2_A 276 SSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPR 354 (741)
T ss_dssp CTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCE
T ss_pred CCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccc
Confidence 99999887776544 8999999876211011112222233333 34778877766542 23444422
Q ss_pred ------------------CCCEEEEEeCCCcEEEEeCC-CCeEEeeecccCCCccEEEEEEccCCCEEEE----EeCCCc
Q psy15157 253 ------------------DGRIYCSGSKDGDIKIWDGV-SSKCVATFSKAHDGAEISSLTFTRNGKYLLS----SGKDSL 309 (344)
Q Consensus 253 ------------------~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s----~~~dg~ 309 (344)
++.++++...|+..+||... +++....+.... ...+..+.++|+++.|+. ....+.
T Consensus 355 ~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 433 (741)
T 1yr2_A 355 FDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPAT 433 (741)
T ss_dssp EEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEE
T ss_pred cEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 33456677778876666543 455555554222 346889999999886652 234578
Q ss_pred EEEEEcCCCeeEEEee
Q psy15157 310 VKLWELSSARCLIAYT 325 (344)
Q Consensus 310 i~vwd~~~~~~~~~~~ 325 (344)
|++||+.+++ ...++
T Consensus 434 i~~~d~~tg~-~~~l~ 448 (741)
T 1yr2_A 434 VLALDPATAK-TTPWE 448 (741)
T ss_dssp EEEEETTTTE-EEECS
T ss_pred EEEEECCCCc-EEEEe
Confidence 9999998887 33443
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.1e-07 Score=81.54 Aligned_cols=174 Identities=11% Similarity=0.063 Sum_probs=111.6
Q ss_pred EEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCCCEEEEEeCCC
Q psy15157 125 GAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSAPILASGSKDK 201 (344)
Q Consensus 125 ~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg 201 (344)
++|+++++.|+++..++ .|.+|+...... ...+..+.. ....+.+++++|++..|+.+..++
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~---------------~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~ 240 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA---------------PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNK 240 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC---------------EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTC
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce---------------eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCC
Confidence 89999999988888766 788888753110 001111112 446678899999544555577789
Q ss_pred cEEEEEcCCCcccccee---eeccccce-E-EEEEecCCCEEEE-EeCCCEEEEE-------------------------
Q psy15157 202 TVKMFDYSKSSVRKAHK---TIQESTFV-R-CLSFHPCGDYMVV-GTDHFVLRLY------------------------- 250 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~---~~~~~~~v-~-~~~~~~~~~~l~~-~~~~~~i~~~------------------------- 250 (344)
.|+.||..++... .+. .......- . .++|+|++..|++ ...++.|+.|
T Consensus 241 ~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~ 319 (409)
T 3hrp_A 241 NFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREE 319 (409)
T ss_dssp EEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGG
T ss_pred cEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccc
Confidence 9999999876432 110 11111111 2 8999996444444 4455566655
Q ss_pred -----------cCCCCEEEEEe-CCCcEEEEeCCCCeEEeeecccC-------------CCccEEEEEEccCCCEEEEEe
Q psy15157 251 -----------SSDGRIYCSGS-KDGDIKIWDGVSSKCVATFSKAH-------------DGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 251 -----------~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~i~~~~~~~~l~s~~ 305 (344)
+++|+++++-+ .++.|+.||..++.... +.... .-.....++++++|.++++..
T Consensus 320 ~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~-~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~ 398 (409)
T 3hrp_A 320 ALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST-VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEA 398 (409)
T ss_dssp CBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE-EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES
T ss_pred cEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE-EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEEC
Confidence 45667666666 77889999977776432 22110 013488999999988888888
Q ss_pred CCCcEEEEEc
Q psy15157 306 KDSLVKLWEL 315 (344)
Q Consensus 306 ~dg~i~vwd~ 315 (344)
.++.|+.+++
T Consensus 399 ~n~~Ir~i~~ 408 (409)
T 3hrp_A 399 WGKAIRKYAV 408 (409)
T ss_dssp TTCEEEEEEE
T ss_pred CCCeEEEEEe
Confidence 8888988875
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.6e-06 Score=75.95 Aligned_cols=191 Identities=9% Similarity=-0.006 Sum_probs=118.7
Q ss_pred CCCCCEEEEEeC--CC---eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----
Q psy15157 128 SIDGQLCATGSV--DA---SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS---- 198 (344)
Q Consensus 128 s~~~~~l~sg~~--dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---- 198 (344)
.|+++++.+... .. +|.+||..+ .+.+.++..-..+ .++++|+++.++.+.
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t------------------~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~ 88 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGS------------------GSILGHVNGGFLP--NPVAAHSGSEFALASTSFS 88 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCC------------------CeEEEEecCCCCC--CeEECCCCCEEEEEecccc
Confidence 356665555542 22 789999864 2334444433333 899999999888775
Q ss_pred ------CCCcEEEEEcCCCccccceeeecc-----ccceEEEEEecCCCEEEEEeC--CCEEEEEcCCCC-E--------
Q psy15157 199 ------KDKTVKMFDYSKSSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTD--HFVLRLYSSDGR-I-------- 256 (344)
Q Consensus 199 ------~dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~~~~~-~-------- 256 (344)
.++.|.+||..+.+....+..... ......+.|+|+|++++++.. ++.|.+++ ... .
T Consensus 89 ~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~ 167 (373)
T 2mad_H 89 RIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP 167 (373)
T ss_pred ccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC
Confidence 367899999988765544432200 123457899999999999874 46677766 332 2
Q ss_pred ------------EEEEeCCCcEEEEeCCCCeEEeeec------------------c-c------------------CC--
Q psy15157 257 ------------YCSGSKDGDIKIWDGVSSKCVATFS------------------K-A------------------HD-- 285 (344)
Q Consensus 257 ------------l~~~~~dg~i~iwd~~~~~~~~~~~------------------~-~------------------~~-- 285 (344)
+++.+.||.+.++|. +++...... . . ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~ 246 (373)
T 2mad_H 168 TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA 246 (373)
T ss_pred ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc
Confidence 233346777777777 554431100 0 0 00
Q ss_pred -------------------CccEEEEEEccCCCEEEEEeC----------CCcEEEEEcCCCeeEEEeecCCCcCceeee
Q psy15157 286 -------------------GAEISSLTFTRNGKYLLSSGK----------DSLVKLWELSSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 286 -------------------~~~v~~i~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 336 (344)
......+.++|+++.+++... ++.|.++|+.+++.+.++...+ ....+
T Consensus 247 ~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i 323 (373)
T 2mad_H 247 TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAI 323 (373)
T ss_pred eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeE
Confidence 001222678888888877653 3579999999999999996543 23555
Q ss_pred eeeccCC
Q psy15157 337 TLTVDAD 343 (344)
Q Consensus 337 ~~~~~~~ 343 (344)
.+++|++
T Consensus 324 ~~s~Dg~ 330 (373)
T 2mad_H 324 SVAQDGG 330 (373)
T ss_pred EECCCCC
Confidence 5566553
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=98.84 E-value=1.4e-07 Score=82.06 Aligned_cols=171 Identities=12% Similarity=0.097 Sum_probs=113.2
Q ss_pred CCCCCEEEEEeC-----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----
Q psy15157 128 SIDGQLCATGSV-----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS---- 198 (344)
Q Consensus 128 s~~~~~l~sg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---- 198 (344)
.|+++.++.... ++.|.+.|..+ .+.+.++..-..+ .++++|+++.++.++
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t------------------~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEA------------------GRVIGMIDGGFLP--NPVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTT------------------TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCC------------------CeEEEEEECCCCC--cEEECCCCCEEEEEccccc
Confidence 467776666654 67899999864 4445555433344 499999999776665
Q ss_pred ------CCCcEEEEEcCCCccccceeeec-----cccceEEEEEecCCCEEEEEeC--CCEEEEEc--------------
Q psy15157 199 ------KDKTVKMFDYSKSSVRKAHKTIQ-----ESTFVRCLSFHPCGDYMVVGTD--HFVLRLYS-------------- 251 (344)
Q Consensus 199 ------~dg~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~-------------- 251 (344)
.++.|.+||..+.+....+.... .......+.++|+|++++++.. ++.+.+++
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC
Confidence 36789999999987665554321 0123456899999999999874 57787762
Q ss_pred ------CCCCEEEEEeCCCcEEEEeCCC-CeEEeeecccC--CCccE-EEEEEc-cCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 252 ------SDGRIYCSGSKDGDIKIWDGVS-SKCVATFSKAH--DGAEI-SSLTFT-RNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 252 ------~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~--~~~~v-~~i~~~-~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
...+.+++.+.||.+.+.++.+ ++......... ...++ ....|. ++|++++ .+.+|.|++.|+.++.
T Consensus 181 ~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 181 CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 2345566888999999999976 55432211110 01112 224564 6887666 4558999999997664
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.80 E-value=1e-06 Score=77.53 Aligned_cols=181 Identities=10% Similarity=0.028 Sum_probs=111.5
Q ss_pred ceEEEEECCCCCEEEEEeCC------CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC---cCCeEEEEEcCCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVD------ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH---IEEVTCLEFHPSA 191 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~ 191 (344)
....+..+|+| +++++..+ |.|.+.|..+. +.+.++..- ..--..+.|+|++
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~------------------~v~~~~~~~~~~~~~~Yd~~~~p~~ 199 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF------------------EPLGKWEIDRGDQYLAYDFWWNLPN 199 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC------------------CEEEECCSBCTTCCCCCCEEEETTT
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC------------------eEEEEEccCCCCccccceEEECCCC
Confidence 45677888999 77776665 78999998653 333333311 1223468889999
Q ss_pred CEEEEEe-------------------CCCcEEEEEcCCCccccceeeeccccceEEEEE--ecCCCEEEEEe------CC
Q psy15157 192 PILASGS-------------------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF--HPCGDYMVVGT------DH 244 (344)
Q Consensus 192 ~~l~s~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~------~~ 244 (344)
+.+++.. .+.+|.+||+.+++....+...........+.| +|+++++++++ .+
T Consensus 200 ~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls 279 (462)
T 2ece_A 200 EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS 279 (462)
T ss_dssp TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC
T ss_pred CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC
Confidence 9888874 378999999998765555443212234555656 99999888765 34
Q ss_pred CEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeec---ccC--CCccEEEEEEccCCCEEEEEeC-CCcEEEEEcCC-
Q psy15157 245 FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS---KAH--DGAEISSLTFTRNGKYLLSSGK-DSLVKLWELSS- 317 (344)
Q Consensus 245 ~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~--~~~~v~~i~~~~~~~~l~s~~~-dg~i~vwd~~~- 317 (344)
+.|.+|..++..+ ..+.+.|+.+.+....+. ... .+.....|.+++||++|+++.. .+.|.+||+..
T Consensus 280 s~V~v~~~d~g~~------~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 280 SSIWLWFYEDGKW------NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp EEEEEEEEETTEE------EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred ceEEEEEecCCce------eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 4555554332111 123344444332221111 000 0124678999999999988764 68899999863
Q ss_pred --CeeEEEeec
Q psy15157 318 --ARCLIAYTG 326 (344)
Q Consensus 318 --~~~~~~~~~ 326 (344)
.+.+..+.-
T Consensus 354 ~~~~lv~~I~t 364 (462)
T 2ece_A 354 FKPVLTGKVKL 364 (462)
T ss_dssp TSCEEEEEEEC
T ss_pred CCcEEEEEEEe
Confidence 355555544
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.76 E-value=7.4e-07 Score=77.16 Aligned_cols=168 Identities=7% Similarity=0.044 Sum_probs=98.9
Q ss_pred CceEEEEECCCCCEEEEEe--CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 120 SPCRAGAFSIDGQLCATGS--VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
..+..++++++|+++++.. .++.++||.+.++... .+.... .....|...+.+++++++++++++-
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~-----------~~~~~~~~~p~gv~~d~~g~L~v~D 84 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQS-----------GNAIITFDTVLGIKSDGNGIVWMLD 84 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCC-----------SSCCCCCSCEEEEEECSSSEEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcc-----------cCcccceeEeeEEEEcCCCcEEEEc
Confidence 6899999999999999864 2343666666422111 000000 0122466789999999998866655
Q ss_pred eC-----CCcEEEEEcCCCccccceeee----ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEE
Q psy15157 198 SK-----DKTVKMFDYSKSSVRKAHKTI----QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 198 ~~-----dg~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i 268 (344)
.. ++.|.+||+.+++....+... .+...+..+++++++..++++... ...++.|.+
T Consensus 85 ~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~---------------~~~~~~i~v 149 (343)
T 2qe8_A 85 NGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPA---------------PDDKAALIR 149 (343)
T ss_dssp CHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECC---------------SGGGCEEEE
T ss_pred CCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCc---------------cCCCCeEEE
Confidence 43 578999999887654444321 112346778888765555443210 003445555
Q ss_pred EeCCCCeEEeeeccc---------------------C------CCccEEEEEEccCCCEEEEEeCCC-cEEEEE
Q psy15157 269 WDGVSSKCVATFSKA---------------------H------DGAEISSLTFTRNGKYLLSSGKDS-LVKLWE 314 (344)
Q Consensus 269 wd~~~~~~~~~~~~~---------------------~------~~~~v~~i~~~~~~~~l~s~~~dg-~i~vwd 314 (344)
||..+++....+..+ . -...++.|+|+|+|+.|+.+..++ .|+.++
T Consensus 150 ~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 150 VDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp EETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred EECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 555544433322110 0 001368899999999998887666 454444
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.73 E-value=7.6e-06 Score=70.22 Aligned_cols=163 Identities=15% Similarity=0.129 Sum_probs=100.3
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec--CCcCCeEEEEEcCCCCEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY--DHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~ 195 (344)
+...+.+++|+++|+++++. .+ .|.+||..++... .+.... .....+.+++++|+|++++
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~----------------~~~~~~~~~~~~~~~~i~~d~~G~l~v 149 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLT----------------LHAELESDLPGNRSNDGRMHPSGALWI 149 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEE----------------EEECSSTTCTTEEEEEEEECTTSCEEE
T ss_pred CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEE----------------EEeeCCCCCCCCCCCCEEECCCCCEEE
Confidence 34679999999999877765 44 4999998643211 111111 1124588999999999776
Q ss_pred EEeC------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEEc-----------------
Q psy15157 196 SGSK------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYS----------------- 251 (344)
Q Consensus 196 s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~~----------------- 251 (344)
+... .+.|..+| +++... + .........++|+|+|+.++++. .++.|.+|+
T Consensus 150 ~~~~~~~~~~~~~l~~~~--~g~~~~-~--~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 150 GTMGRKAETGAGSIYHVA--KGKVTK-L--FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp EEEETTCCTTCEEEEEEE--TTEEEE-E--EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred EeCCCcCCCCceEEEEEe--CCcEEE-e--eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEE
Confidence 5542 24455555 443221 1 12223467899999998776553 344454443
Q ss_pred --------------CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEEeC
Q psy15157 252 --------------SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSSGK 306 (344)
Q Consensus 252 --------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~~~ 306 (344)
++|.++++...++.|.+||. +++.+..+... . ..+.+++|+ ++++.|+.++.
T Consensus 225 ~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~-~-~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP-G-KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS-C-SBEEEEEEESTTSCEEEEEEB
T ss_pred CCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECC-C-CCcEEEEEecCCCCEEEEEec
Confidence 34444444445678999987 56666666432 2 358999998 88887765543
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.68 E-value=5.1e-05 Score=62.87 Aligned_cols=184 Identities=7% Similarity=-0.046 Sum_probs=114.5
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEE
Q psy15157 120 SPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 197 (344)
..+..++|+++++ ++++-..++.|..++.+.. ...............+++++++. ++++-
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~------------------~~~~~~~~~~~~p~~ia~d~~~~~lyv~d 97 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG------------------EPTTIIRQDLGSPEGIALDHLGRTIFWTD 97 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSC------------------CCEEEECTTCCCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCC------------------CcEEEEECCCCCccEEEEEecCCeEEEEE
Confidence 4678999998655 4445555789999998632 11112222234678999999755 55555
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC---CCEEEEE-----------------------c
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD---HFVLRLY-----------------------S 251 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~i~~~-----------------------~ 251 (344)
...+.|.++++..... ..+. .........++++|++..++++.. .+.|..+ +
T Consensus 98 ~~~~~I~~~~~~g~~~-~~~~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 98 SQLDRIEVAKMDGTQR-RVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp TTTTEEEEEETTSCSC-EEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEE
T ss_pred CCCCEEEEEEcCCCCE-EEEE-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEc
Confidence 6678999999865322 1111 112245688999997777666653 2455543 5
Q ss_pred CCCCE-EEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 252 SDGRI-YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 252 ~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+++.. +++-...+.|.++|.........+. .. .....++.. ++..+++....+.|.++|..+++.+..+...
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~--~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-GL--QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETTEEEEEEEEE-CC--CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCS
T ss_pred CCCCEEEEEECCCCEEEEEecCCCceEEEec-CC--CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccc
Confidence 55444 4444556788899887554333332 11 234677765 3444444446689999999999999888643
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.1e-05 Score=66.42 Aligned_cols=168 Identities=10% Similarity=0.002 Sum_probs=108.3
Q ss_pred cCCC--ceEEEEECCCCCEEEEEeC--CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC-CcCCeEEEEEcCCC
Q psy15157 117 SHKS--PCRAGAFSIDGQLCATGSV--DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD-HIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~--~v~~~~~s~~~~~l~sg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~ 191 (344)
.|.. ....++|++++.++++.+. ++.|+++|+.++ +.+..+.- .......+++.. +
T Consensus 16 p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg------------------~v~~~i~l~~~~fgeGi~~~g-~ 76 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTG------------------KVENIHKMDDSYFGEGLTLLN-E 76 (266)
T ss_dssp ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTC------------------CEEEEEECCTTCCEEEEEEET-T
T ss_pred ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCC------------------CEEEEEecCCCcceEEEEEeC-C
Confidence 4543 3689999998766666553 579999999754 33333321 111223455552 3
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
.++++.-.++.+.++|..+.+....+... .... ..++++|+.++ ++..++.|.++|.
T Consensus 77 ~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~g---~glt~Dg~~l~-------------------vs~gs~~l~viD~ 133 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDG---WGLATDGKILY-------------------GSDGTSILYEIDP 133 (266)
T ss_dssp EEEEEETTCSEEEEEETTTTEEEEEEECC-SSSC---CEEEECSSSEE-------------------EECSSSEEEEECT
T ss_pred EEEEEEecCCEEEEEECCCCcEEEEEECC-CCCe---EEEEECCCEEE-------------------EECCCCeEEEEEC
Confidence 34555556899999999987665555432 1111 22344444443 4446789999999
Q ss_pred CCCeEEeeecccCCC---ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 272 VSSKCVATFSKAHDG---AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 272 ~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.+.+.+..+.-...+ ..++.+.|. +|+..+....++.|.+.|..+++.+..+.-.
T Consensus 134 ~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 134 HTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp TTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 998888777633221 136788888 7755555556889999999999999998753
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.3e-06 Score=82.74 Aligned_cols=191 Identities=14% Similarity=0.144 Sum_probs=118.6
Q ss_pred EEEECCCCCEEEEEeCCCe-------------------EEEEEcCCccccccCCCCC-CcCCCCCCceEEEecCCcCCeE
Q psy15157 124 AGAFSIDGQLCATGSVDAS-------------------IKILDVDRMLAKSSMESSE-PQNDQQGHPVIRTLYDHIEEVT 183 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~-------------------v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~ 183 (344)
.+++++++.+++.+..++. |..||..++.......... ...+ + .....+.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd---------~-~~~~~~~ 308 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD---------Y-TATQHMI 308 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC---------C-CCCSCEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc---------c-cCCCCcE
Confidence 5788888888888887764 8888887654433211000 0000 0 0111222
Q ss_pred EEEEcCCCC---EEEEEeCCCcEEEEEcCCCccccceeeecc--------------------------cc----------
Q psy15157 184 CLEFHPSAP---ILASGSKDKTVKMFDYSKSSVRKAHKTIQE--------------------------ST---------- 224 (344)
Q Consensus 184 ~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------~~---------- 224 (344)
......+++ .++.++.+|.++++|..+++.+........ ..
T Consensus 309 l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg 388 (689)
T 1yiq_A 309 LAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA 388 (689)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS
T ss_pred EEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc
Confidence 222223454 788899999999999999876532221100 00
Q ss_pred -ceEEEEEecCCCEEEEEeCCCEEEEEcCC--------CCEEEEEe------------------CCCcEEEEeCCCCeEE
Q psy15157 225 -FVRCLSFHPCGDYMVVGTDHFVLRLYSSD--------GRIYCSGS------------------KDGDIKIWDGVSSKCV 277 (344)
Q Consensus 225 -~v~~~~~~~~~~~l~~~~~~~~i~~~~~~--------~~~l~~~~------------------~dg~i~iwd~~~~~~~ 277 (344)
.-..++++|+...+++...+....++... +..+..+. .+|.|+.||+.+++.+
T Consensus 389 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~ 468 (689)
T 1yiq_A 389 HDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAA 468 (689)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEE
T ss_pred cCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeE
Confidence 01126788888888877665444443211 01111111 2488999999999988
Q ss_pred eeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..+..+. ++..-.+...+.+++.|+.||.|+.||.++|+.+.+++..
T Consensus 469 W~~~~~~---~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 469 WEVPYVT---IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eEccCCC---CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 7775322 2333456667889999999999999999999999999855
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.1e-08 Score=89.79 Aligned_cols=126 Identities=13% Similarity=0.091 Sum_probs=76.1
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc------------------
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS------------------ 251 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~------------------ 251 (344)
++..+++++.||.|+.||..+++....+.. ..+.+..+..++..+++++.++.+..|+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 467899999999999999999987655543 2333334455677777777888888762
Q ss_pred ---C---CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 252 ---S---DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 252 ---~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
| .+..+++|+.|+.|+.||..+|+.+..+.... ...++|++..+++++.|+.|+.||.++|+.+..+.
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 1 44567778889999999999999887765321 23456788899999999999999999999876665
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.8e-06 Score=76.51 Aligned_cols=179 Identities=9% Similarity=0.072 Sum_probs=111.6
Q ss_pred CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----------CCCcEEEEEcCC
Q psy15157 141 ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS----------KDKTVKMFDYSK 210 (344)
Q Consensus 141 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~ 210 (344)
+.|.++|..+ .+.+.++.--..+ .++++|+++.++.+. .++.|.++|..+
T Consensus 99 ~~VsVID~~t------------------~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 99 TQQFVIDGST------------------GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp EEEEEEETTT------------------TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CeEEEEECCC------------------CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 6899999865 3445555433344 899999999777665 467899999999
Q ss_pred Cccccceeeecc-----ccceEEEEEecCCCEEEEEeC--CCEEEEEcCC--------------------CCEEEEEeCC
Q psy15157 211 SSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTD--HFVLRLYSSD--------------------GRIYCSGSKD 263 (344)
Q Consensus 211 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~~~--------------------~~~l~~~~~d 263 (344)
.+....+..... ......+.++|+|++++++.. ++.+.+.+.. .+.+++.+.|
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCC
Confidence 876655543200 122345789999999999874 5677776322 1334555667
Q ss_pred CcEEEEeCCCCeEEee----e--------------------------------cccCC------------------C---
Q psy15157 264 GDIKIWDGVSSKCVAT----F--------------------------------SKAHD------------------G--- 286 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~----~--------------------------------~~~~~------------------~--- 286 (344)
|.+.+.+..+++.... + ..... +
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 7766666644332210 0 00000 0
Q ss_pred ccEEEEEEccCCCEEEEEeC----------CCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 287 AEISSLTFTRNGKYLLSSGK----------DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
.....++++|+++.+++... ++.|.++|+.+.+.+.++.... ....+.+++|+
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg 381 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDA 381 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSS
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCC
Confidence 00112678888887776642 3579999999999999887543 23444555554
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.61 E-value=2.1e-06 Score=74.73 Aligned_cols=178 Identities=10% Similarity=-0.066 Sum_probs=111.8
Q ss_pred eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCC
Q psy15157 142 SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS----------KDKTVKMFDYSKS 211 (344)
Q Consensus 142 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~ 211 (344)
+|.+.|..+ .+.+.++..-..+ .+.++|+++.++.+. .++.|.+||..+.
T Consensus 47 ~vsvID~~t------------------~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 47 ENWVSCAGC------------------GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEEETTT------------------TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred eEEEEECCC------------------CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 788999864 4455555444445 799999999887775 3789999999998
Q ss_pred ccccceeeecc-----ccceEEEEEecCCCEEEEEeC--CCEEEE--EcCC-----------------CCEEEEEeCCCc
Q psy15157 212 SVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTD--HFVLRL--YSSD-----------------GRIYCSGSKDGD 265 (344)
Q Consensus 212 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--~~~i~~--~~~~-----------------~~~l~~~~~dg~ 265 (344)
+....+..... ......++++|+|++++++.. ...+.+ ++.. .+.+++.+.|+.
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~ 186 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPAS 186 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTS
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCC
Confidence 87666553210 123456899999999999874 456777 6441 123344556666
Q ss_pred EEEEeCCC-----CeEE-------------------------------------------eeeccc-----CCC---ccE
Q psy15157 266 IKIWDGVS-----SKCV-------------------------------------------ATFSKA-----HDG---AEI 289 (344)
Q Consensus 266 i~iwd~~~-----~~~~-------------------------------------------~~~~~~-----~~~---~~v 289 (344)
+.+.|..+ ++.. ..+... ..+ ...
T Consensus 187 ~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 266 (368)
T 1mda_H 187 LAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF 266 (368)
T ss_dssp CEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSS
T ss_pred EEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcc
Confidence 66666655 2211 000000 000 001
Q ss_pred EEEEEccCCCEEEEEeC---------CCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 290 SSLTFTRNGKYLLSSGK---------DSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
..+.++|+++.++.+.. ++.+.++|+.+++.+..+.... ....+.+++|+
T Consensus 267 ~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg 325 (368)
T 1mda_H 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDG 325 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSS
T ss_pred eeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCC
Confidence 11679999998887543 2356699999999999887544 23444555554
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.60 E-value=5.7e-06 Score=67.55 Aligned_cols=164 Identities=10% Similarity=0.110 Sum_probs=107.2
Q ss_pred cCCCc--eEEEEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeE--EEEEcCC
Q psy15157 117 SHKSP--CRAGAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVT--CLEFHPS 190 (344)
Q Consensus 117 ~h~~~--v~~~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~ 190 (344)
.|... ...+.|+ ++.++.+.+.+| .|+++|+.++ +.+..+.-. .... .++. +
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg------------------kv~~~~~l~-~~~FgeGit~--~ 95 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG------------------KTLQQIELG-KRYFGEGISD--W 95 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC------------------CEEEEEECC-TTCCEEEEEE--E
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCC------------------cEEEEEecC-CccceeEEEE--e
Confidence 45444 4889998 778888888776 8999999754 333333222 1222 2343 3
Q ss_pred CCEE-EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE
Q psy15157 191 APIL-ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW 269 (344)
Q Consensus 191 ~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw 269 (344)
+..| ++.-.++.+.+||..+.+....+...... ..+ ++++..|+ ....++.|.++
T Consensus 96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG---~gl--t~dg~~L~-------------------~SdGs~~i~~i 151 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG---WGL--THNDQYLI-------------------MSDGTPVLRFL 151 (262)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC---CCE--EECSSCEE-------------------ECCSSSEEEEE
T ss_pred CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc---eEE--ecCCCEEE-------------------EECCCCeEEEE
Confidence 4444 44445899999999998776666543211 122 23444333 44456789999
Q ss_pred eCCCCeEEeeecccCCC---ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 270 DGVSSKCVATFSKAHDG---AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 270 d~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
|..+.+.+..+.-...+ ..++.+.|. +|+..+..-.++.|.+.|.++|+.+..+...
T Consensus 152 Dp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 152 DPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp CTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred cCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 99999888777643222 235668887 7765555557889999999999999998764
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.56 E-value=2.6e-06 Score=80.61 Aligned_cols=187 Identities=13% Similarity=0.153 Sum_probs=116.8
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-----
Q psy15157 123 RAGAFSIDGQLCATGSVDA-------------------SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH----- 178 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg-------------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----- 178 (344)
..+++++++..++.+..++ +|..+|..++....... ...|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~----------------~~~~d~wd~ 309 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQ----------------ETPGDNWDY 309 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE----------------SSTTCCSCC
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEe----------------cCCCccccc
Confidence 3578888888888877664 47778876654333211 1111
Q ss_pred --cCCeEEEEEcCCC---CEEEEEeCCCcEEEEEcCCCccccceeeeccc---------cce------------------
Q psy15157 179 --IEEVTCLEFHPSA---PILASGSKDKTVKMFDYSKSSVRKAHKTIQES---------TFV------------------ 226 (344)
Q Consensus 179 --~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~~v------------------ 226 (344)
......+....+| ..++.++.+|.++++|..+++.+......... .++
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 1122223333466 57889999999999999999865444321100 001
Q ss_pred ------EEEEEecCCCEEEEEeCCCEEEEEcCC----C------------CEEEE--------EeCCCcEEEEeCCCCeE
Q psy15157 227 ------RCLSFHPCGDYMVVGTDHFVLRLYSSD----G------------RIYCS--------GSKDGDIKIWDGVSSKC 276 (344)
Q Consensus 227 ------~~~~~~~~~~~l~~~~~~~~i~~~~~~----~------------~~l~~--------~~~dg~i~iwd~~~~~~ 276 (344)
..++++|++.++++...+-...++... | .++-. ....|.|..||+.+++.
T Consensus 390 ~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~ 469 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA 469 (677)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE
T ss_pred ccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE
Confidence 145777877777776543222222110 0 00000 01237899999999998
Q ss_pred EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 277 VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 277 ~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+..+... .++.+..+..++..++.++.||.+++||.++|+.+.++....
T Consensus 470 ~W~~~~~---~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 470 AWSVEHV---SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EeecCCC---CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 8777532 234445566788899999999999999999999999998543
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.4e-05 Score=65.33 Aligned_cols=162 Identities=9% Similarity=0.020 Sum_probs=106.9
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE-ecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT-LYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.-...+.|+ ++.++.+.+.+|.|+++|+.++... .. +... .--..+++.. +.++++.-
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~------------------~~~l~~~-~FgeGit~~g-~~Ly~ltw 113 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPV------------------WMERLGN-IFAEGLASDG-ERLYQLTW 113 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCS------------------EEEECTT-CCEEEEEECS-SCEEEEES
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEE------------------eEECCCC-cceeEEEEeC-CEEEEEEc
Confidence 335788887 4778888889999999999764322 22 2211 1112355543 34555556
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
.++.+.+||..+.+....+...... +.++ ++++.| +.+..++.|+++|..+.+.+.
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~~eG---wGLt--~Dg~~L-------------------~vSdGs~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYSGEG---WGLC--YWNGKL-------------------VRSDGGTMLTFHEPDGFALVG 169 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECSSCC---CCEE--EETTEE-------------------EEECSSSEEEEECTTTCCEEE
T ss_pred cCCEEEEEECCcCcEEEEEeCCCce---eEEe--cCCCEE-------------------EEECCCCEEEEEcCCCCeEEE
Confidence 7899999999998776666543221 2222 333433 345568899999999998887
Q ss_pred eecccCCC---ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 279 TFSKAHDG---AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 279 ~~~~~~~~---~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.+.-...+ ..++.+.|. +|+..+..-.+..|.+.|.++|+.+..+...
T Consensus 170 ~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 170 AVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred EEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 77533222 235778887 7765555556889999999999999988754
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.8e-05 Score=68.51 Aligned_cols=172 Identities=12% Similarity=0.095 Sum_probs=103.3
Q ss_pred CCCCEEEE-EeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec------C-CcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 129 IDGQLCAT-GSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY------D-HIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 129 ~~~~~l~s-g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
+++++|+. |..+++|.|+|+.+. ....+...++. . -...-..+...|++ +++++..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~--------------p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~ 157 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPN--------------PREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGN 157 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSC--------------TTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCC--------------CCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCC
Confidence 77776555 556788999998532 01123333332 0 11134456778999 77776666
Q ss_pred ------CcEEEEEcCCCccccceeeeccc-cceEEEEEecCCCEEEEEeCC---CEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy15157 201 ------KTVKMFDYSKSSVRKAHKTIQES-TFVRCLSFHPCGDYMVVGTDH---FVLRLYSSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 201 ------g~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~---~~i~~~~~~~~~l~~~~~dg~i~iwd 270 (344)
|.|.+.|..+.+.+......... ..-..+.|+|+++.+++.... +...-|.+. .+ .+-.+..|.+||
T Consensus 158 ~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~--~~-~~~~~d~V~v~D 234 (462)
T 2ece_A 158 EEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLE--HL-KDRYGNRIHFWD 234 (462)
T ss_dssp TTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTT--TH-HHHSCCEEEEEE
T ss_pred cCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchh--hh-hhccCCEEEEEE
Confidence 78999999988766555432222 223456778877766643200 000000000 00 002468899999
Q ss_pred CCCCeEEeeecccCCCccEEEEEE--ccCCCEEEEEe------CCCcEEEEEcCCC
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTF--TRNGKYLLSSG------KDSLVKLWELSSA 318 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~s~~------~dg~i~vwd~~~~ 318 (344)
+.+++.+.++.....+.....+.| +|+++++++++ .+++|.+|....|
T Consensus 235 ~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 235 LRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp TTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred CCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 999988888875423334556666 99999988877 4668888776655
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.46 E-value=4.1e-06 Score=76.33 Aligned_cols=168 Identities=15% Similarity=0.041 Sum_probs=102.1
Q ss_pred CceEEEEE-C-CCCCEEEEEe------------------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc
Q psy15157 120 SPCRAGAF-S-IDGQLCATGS------------------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI 179 (344)
Q Consensus 120 ~~v~~~~~-s-~~~~~l~sg~------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 179 (344)
..+..+++ + |+++++++++ .++.+.+.|.+++. ....+.--.
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~------------------v~~qI~Vgg 195 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE------------------VAWQVLVSG 195 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE------------------EEEEEEESS
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe------------------EEEEEEeCC
Confidence 45788888 5 8999998885 24568888886532 222222111
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC--------------------------------------cEEEEEcCC--Cccccceee
Q psy15157 180 EEVTCLEFHPSAPILASGSKDK--------------------------------------TVKMFDYSK--SSVRKAHKT 219 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~~dg--------------------------------------~i~iwd~~~--~~~~~~~~~ 219 (344)
.-..++++|+|+++++.+.+. .|.+.|..+ ++. ....
T Consensus 196 -~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~--~~~~ 272 (595)
T 1fwx_A 196 -NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSL--FTRY 272 (595)
T ss_dssp -CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCS--SEEE
T ss_pred -CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCce--eEEE
Confidence 234567788888777776542 244444444 111 0011
Q ss_pred eccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe------------EEeeecccCCCc
Q psy15157 220 IQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK------------CVATFSKAHDGA 287 (344)
Q Consensus 220 ~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~------------~~~~~~~~~~~~ 287 (344)
..-.....++.++|||+++++ ++..+..|.++|+.+.+ .+..+.. +.
T Consensus 273 Ipvg~~PhGv~~sPDGk~v~V------------------~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v---G~ 331 (595)
T 1fwx_A 273 IPIANNPHGCNMAPDKKHLCV------------------AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL---GL 331 (595)
T ss_dssp EEEESSCCCEEECTTSSEEEE------------------ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC---CS
T ss_pred EecCCCceEEEEcCCCCEEEE------------------eCCCCCeEEEEECcccccccccccCcccceEEEcCC---CC
Confidence 111122344556665555554 44567889999998653 3333332 23
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCC----------CeeEEEeecCCC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSS----------ARCLIAYTGAGS 329 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~ 329 (344)
....++|+|+|...++.--|+.|.+||+.+ .+.+.++..|..
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc
Confidence 478999999994444566899999999987 567777776643
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.44 E-value=0.00028 Score=59.78 Aligned_cols=176 Identities=15% Similarity=0.101 Sum_probs=101.0
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
.....++|+++|+++++-..++.|..||.+.. ....+ ........+++.++++++++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-------------------~~~~~-~~~~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-------------------QQIHA-TVEGKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-------------------EEEEE-ECSSEEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-------------------eEEEE-eCCCCceeEEEcCCCcEEEEecc
Confidence 56789999999998777778899999987521 11111 12245889999999997666543
Q ss_pred CC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEc--------------------------
Q psy15157 200 DK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYS-------------------------- 251 (344)
Q Consensus 200 dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~-------------------------- 251 (344)
.. .|..+|..+++....... ........++..+++..+++...++.+..++
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred CCcceEEEEcCCCCeEEEEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 32 466677666654322211 1112223333333332222222244443333
Q ss_pred -----CCCCE-EEEEeCCCcEEEEeCCC-CeE--EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 252 -----SDGRI-YCSGSKDGDIKIWDGVS-SKC--VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 252 -----~~~~~-l~~~~~dg~i~iwd~~~-~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
++++. +++-...+.|..||... ++. ...+... .....++++++|++.++....+.|.++|.. |+.
T Consensus 171 pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 171 ANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred CCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 33433 34444556788888764 321 1111111 124568999999987777778899999975 655
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.4e-05 Score=75.94 Aligned_cols=163 Identities=11% Similarity=0.132 Sum_probs=98.2
Q ss_pred CCCceEEEEECCCCCEEEEEeC----CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSV----DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP- 192 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 192 (344)
|...+..+.|||||++++.... +..|.+||+.+. ......+..+....... |++++.
T Consensus 232 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~-----------------~~~~~~l~~~~~~~~~~-~~~~g~~ 293 (693)
T 3iuj_A 232 QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE-----------------NAPLLTVQGDLDADVSL-VDNKGST 293 (693)
T ss_dssp GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST-----------------TCCCEEEECSSSSCEEE-EEEETTE
T ss_pred CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC-----------------CCceEEEeCCCCceEEE-EeccCCE
Confidence 3445788999999998754432 247899998632 11223444555555554 556655
Q ss_pred EEEEEeCC---CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC--cEE
Q psy15157 193 ILASGSKD---KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG--DIK 267 (344)
Q Consensus 193 ~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg--~i~ 267 (344)
+++....+ +.|..+|+.++..........+...+. .|++++++|+.. ...++ .|+
T Consensus 294 l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~------------------~~~~g~~~l~ 353 (693)
T 3iuj_A 294 LYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE------------------YMVDATARVE 353 (693)
T ss_dssp EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE------------------EEETTEEEEE
T ss_pred EEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE------------------EEECCeeEEE
Confidence 44454443 679999998764311112223333333 777777666543 22333 688
Q ss_pred EEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC----CcEEEEEcCCCee
Q psy15157 268 IWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD----SLVKLWELSSARC 320 (344)
Q Consensus 268 iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~vwd~~~~~~ 320 (344)
+||+..+. ...+..... ..+..+.++++++.|+....+ +.|+.||+.+++.
T Consensus 354 ~~d~~g~~-~~~l~~p~~-~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 354 QFDYEGKR-VREVALPGL-GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EECTTSCE-EEEECCSSS-SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEECCCCe-eEEeecCCC-ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 89887543 344432222 357788888888876655444 7899999987753
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.40 E-value=0.00017 Score=58.30 Aligned_cols=165 Identities=13% Similarity=0.135 Sum_probs=107.5
Q ss_pred cCC--CceEEEEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCC-eEEEEEcCCC
Q psy15157 117 SHK--SPCRAGAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEE-VTCLEFHPSA 191 (344)
Q Consensus 117 ~h~--~~v~~~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~ 191 (344)
.|. .-...+.|+. +.++.+.+.+| .|+.+|+.++ +.+....-.... -..++.. .+
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg------------------kv~~~~~l~~~~fgeGi~~~-~~ 75 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG------------------RILQRAEVPPPYFGAGIVAW-RD 75 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC------------------CEEEEEECCTTCCEEEEEEE-TT
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCC------------------CEEEEEeCCCCcceeEEEEe-CC
Confidence 454 4567899986 67777777754 8999999754 333333221111 1233433 23
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC-------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS------------------- 252 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~------------------- 252 (344)
++++..-.++.+.+||..+.+....+..... -..+ .+++..|+++..++.+.+++|
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~---Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLTPRARFRYPGE---GWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEEECSSC---CCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred EEEEEEeeCCEEEEEECCcCcEEEEEeCCCC---ceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence 3455556689999999999877766664332 2333 357788888887888888732
Q ss_pred --------CCCEEEEEeCCCcEEEEeCCCCeEEeeeccc-----------CCCccEEEEEEccCCCEEEEEeC
Q psy15157 253 --------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKA-----------HDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 253 --------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+|+.++..-.+..|.+.|.++++.+..+... ....-.+.|+++|+++.|+..+.
T Consensus 151 ~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 151 NLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4555544446778999999999988776522 12235799999998877777663
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=0.00015 Score=61.93 Aligned_cols=208 Identities=9% Similarity=-0.030 Sum_probs=114.6
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcC-CCCCCceEEEecCCcCCeEEEEEcC-CCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQN-DQQGHPVIRTLYDHIEEVTCLEFHP-SAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~-~~~ 192 (344)
+.+.-....+++++++|+++.++..++.|..|+..+.............. ....................+++.+ ++.
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 44433456788899999977788889999999875321110000000000 0000000000000123578899998 555
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeee--ccccceEEEEEec-CCCEEEEEeC-----------------CCEEEEE--
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHP-CGDYMVVGTD-----------------HFVLRLY-- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~-----------------~~~i~~~-- 250 (344)
|+.+...+.|..+|..++......... ........+++++ +|...++... .+.+..|
T Consensus 94 -l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 94 -LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp -EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred -EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 444544555888887654322111111 1123467899999 8876665322 1333333
Q ss_pred --------------------cCCCCEEEEE-eCCCcEEEEeCCCCe--EEeeecccCCCccEEEEEEccCCCEEEEEeC-
Q psy15157 251 --------------------SSDGRIYCSG-SKDGDIKIWDGVSSK--CVATFSKAHDGAEISSLTFTRNGKYLLSSGK- 306 (344)
Q Consensus 251 --------------------~~~~~~l~~~-~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~- 306 (344)
+++|+.++.+ +..+.|.+|++.... ....+.. .. + ...++++++|++.++...
T Consensus 173 ~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~-g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 173 STKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP-N-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CS-S-EEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CC-C-CCCeEECCCCCEEEEecCc
Confidence 6677755444 556789999876421 1111111 11 2 678999999987666544
Q ss_pred ---------CCcEEEEEcCCCeeEEEeecC
Q psy15157 307 ---------DSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 307 ---------dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.+.|..+|. .|+.+..+...
T Consensus 250 ~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~ 278 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDE-FGNILEVIPLP 278 (322)
T ss_dssp TTSSTTSCEEEEEEEECT-TSCEEEEEECC
T ss_pred ccccccCCCccEEEEECC-CCCEEEEEECC
Confidence 467888887 57777777654
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=98.27 E-value=0.00022 Score=60.19 Aligned_cols=171 Identities=12% Similarity=0.087 Sum_probs=110.7
Q ss_pred EecCCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC----C--cCCeEEEEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD----H--IEEVTCLEF 187 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h--~~~v~~~~~ 187 (344)
+.....-..+++|.+....|..++ ..++|..|+...... ..+ .+.+ . ...+..|.|
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~----------------~~~-~~~~~s~~g~~~~~~sGl~~ 70 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH----------------FNV-VIDGASSNGDGEQQMSGLSL 70 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE----------------EEE-CCTTTCCSSCCSEEEEEEEE
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE----------------EEE-ecCCccccCCCcceeeEEEE
Confidence 344445566788987555555555 799999999853211 011 1111 0 113579999
Q ss_pred ---cCCCCEEEEEe-------------CCCcEEEEEcC---CCccccceeeec-----------cccceEEEEEecCCCE
Q psy15157 188 ---HPSAPILASGS-------------KDKTVKMFDYS---KSSVRKAHKTIQ-----------ESTFVRCLSFHPCGDY 237 (344)
Q Consensus 188 ---~~~~~~l~s~~-------------~dg~i~iwd~~---~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~ 237 (344)
.|++.++++.. .+..|..+|+. +++......... .......++..++|+.
T Consensus 71 ~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna 150 (334)
T 2p9w_A 71 LTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS 150 (334)
T ss_dssp SSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE
T ss_pred eccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE
Confidence 68877776543 26789999998 665543332211 1134788999999999
Q ss_pred EEEEeCC-CEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 238 MVVGTDH-FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 238 l~~~~~~-~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
.++++.. +.|...+|+|+.+ ..|.+.... .......+.|+++|+|+.|++....|.|..+|+.
T Consensus 151 YVt~s~~~~~I~rV~pdG~~~---------~~~~~~~~~-------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 151 YVAFALGMPAIARVSADGKTV---------STFAWESGN-------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEEESSCEEEEECTTSCCE---------EEEEECCCC-------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred EEeCCCCCCeEEEEeCCCCEE---------eeeeecCCC-------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 9888877 7777777777633 244433221 1112236789999999999888779999999987
Q ss_pred CC
Q psy15157 317 SA 318 (344)
Q Consensus 317 ~~ 318 (344)
+.
T Consensus 215 ~p 216 (334)
T 2p9w_A 215 KP 216 (334)
T ss_dssp SS
T ss_pred CC
Confidence 43
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.27 E-value=0.0011 Score=54.22 Aligned_cols=180 Identities=11% Similarity=0.144 Sum_probs=116.2
Q ss_pred EecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAP 192 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 192 (344)
+.+-...+..++|+|+++ ++++...++.|...|.. +..++.+. +-......|++.+++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-------------------g~v~~~i~l~g~~D~EGIa~~~~g~ 82 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-------------------GDLIRTIPLDFVKDLETIEYIGDNQ 82 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-------------------CCEEEEEECSSCSSEEEEEECSTTE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-------------------CCEEEEEecCCCCChHHeEEeCCCE
Confidence 445556899999999765 55557778888888874 33444432 2225678899998887
Q ss_pred EEEEEeCCCcEEEEEcCCCccc---cceee----eccccceEEEEEecCCCEEEEEeCCCEEEEE---------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVR---KAHKT----IQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~---~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------- 250 (344)
++++.-.++.+.++++...... ..... ...+.....++|+|.++.|+++.......+|
T Consensus 83 ~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~ 162 (255)
T 3qqz_A 83 FVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISK 162 (255)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeec
Confidence 7777667788999988654321 11111 1234456899999999877777654433332
Q ss_pred -------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-------CCccEEEEEEccCCCEEEEE
Q psy15157 251 -------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-------DGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 251 -------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~v~~i~~~~~~~~l~s~ 304 (344)
...+++++.......+..+|.. ++.+..+.... .-...-.|+|+++|+. +..
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l-yIv 240 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI-YIV 240 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCE-EEE
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCE-EEE
Confidence 1345677777777889999965 44544443221 1125689999999984 444
Q ss_pred eCCCcEEEEEc
Q psy15157 305 GKDSLVKLWEL 315 (344)
Q Consensus 305 ~~dg~i~vwd~ 315 (344)
++.+.++.+.-
T Consensus 241 sE~n~~y~f~~ 251 (255)
T 3qqz_A 241 SEPNRFYRFTP 251 (255)
T ss_dssp ETTTEEEEEEC
T ss_pred cCCceEEEEEe
Confidence 77776666654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.22 E-value=3.2e-05 Score=74.13 Aligned_cols=160 Identities=8% Similarity=0.031 Sum_probs=91.6
Q ss_pred ceEEEEEC-CCCCEEEEEeC-CC----eEEEEEcCCc-cccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 121 PCRAGAFS-IDGQLCATGSV-DA----SIKILDVDRM-LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 121 ~v~~~~~s-~~~~~l~sg~~-dg----~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+...+|| |||+++|-+.. +| .|+++|+.++ ... ...+. .....++|+||++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--------------~~~~~------~~~~~~~WspDg~~ 234 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--------------ADKVS------GTNGEIVWGPDHTS 234 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC--------------CCCEE------EECSCCEECSSTTE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC--------------Ccccc------CceeeEEEecCCCE
Confidence 68889999 99998875443 23 4999999753 210 00011 11246789999987
Q ss_pred EEEEeCC-----CcEEEEEcCCCccccceeee-ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 194 LASGSKD-----KTVKMFDYSKSSVRKAHKTI-QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIK 267 (344)
Q Consensus 194 l~s~~~d-----g~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~ 267 (344)
|+-...| ..|+++++.++......... ........+.|+|+|++|+..... .....|+
T Consensus 235 l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~----------------~~~~~l~ 298 (751)
T 2xe4_A 235 LFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQS----------------PETAEVH 298 (751)
T ss_dssp EEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEEC----------------SSCEEEE
T ss_pred EEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecC----------------CCCceEE
Confidence 6665554 25888888765432111111 223345678899988888764321 1244688
Q ss_pred EEeCCCC--eE-EeeecccCCCccEEEEEEccCCCEEEEEeCC----CcEEEEEcCC
Q psy15157 268 IWDGVSS--KC-VATFSKAHDGAEISSLTFTRNGKYLLSSGKD----SLVKLWELSS 317 (344)
Q Consensus 268 iwd~~~~--~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~vwd~~~ 317 (344)
++|+.++ +. +..+..... ....++.|+..+.+++....+ ..|..+|+.+
T Consensus 299 ~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 299 LLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 8888765 22 123322222 345566655444444444443 3577777764
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=3.9e-05 Score=72.61 Aligned_cols=184 Identities=13% Similarity=0.100 Sum_probs=113.7
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC------CCcE
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK------DKTV 203 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------dg~i 203 (344)
++..++.++.|+.|..+|..++........... . .....+.+--.. .+..++.++. +|.|
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~------~-------~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v 192 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEG------Q-------KGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYI 192 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTT------C-------CSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcC------c-------CcCcccccCcEE-ECCEEEEEecccccCCCCEE
Confidence 356788888999999999976544332211000 0 000011100000 1234444443 7999
Q ss_pred EEEEcCCCccccceeeeccc------------------------------cceEEEEEecCCCEEEEEeCCC--------
Q psy15157 204 KMFDYSKSSVRKAHKTIQES------------------------------TFVRCLSFHPCGDYMVVGTDHF-------- 245 (344)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~------------------------------~~v~~~~~~~~~~~l~~~~~~~-------- 245 (344)
+.||..+++....+...... .....++++|++..+++++.++
T Consensus 193 ~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~ 272 (677)
T 1kb0_A 193 TAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVR 272 (677)
T ss_dssp EEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHH
T ss_pred EEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCC
Confidence 99999998866544322111 0113578889999998887664
Q ss_pred -----------EEEEE---------c-----------------------CCC---CEEEEEeCCCcEEEEeCCCCeEEee
Q psy15157 246 -----------VLRLY---------S-----------------------SDG---RIYCSGSKDGDIKIWDGVSSKCVAT 279 (344)
Q Consensus 246 -----------~i~~~---------~-----------------------~~~---~~l~~~~~dg~i~iwd~~~~~~~~~ 279 (344)
.+..+ . .+| ..++.++.+|.++++|..+|+.+..
T Consensus 273 ~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 273 SPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp STTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 24432 1 134 5788899999999999999998766
Q ss_pred ecccCC---------CccE------------------------EEEEEccCCCEEEEEeC--------------------
Q psy15157 280 FSKAHD---------GAEI------------------------SSLTFTRNGKYLLSSGK-------------------- 306 (344)
Q Consensus 280 ~~~~~~---------~~~v------------------------~~i~~~~~~~~l~s~~~-------------------- 306 (344)
+..... +.++ ..++++|++.++++...
T Consensus 353 ~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~ 432 (677)
T 1kb0_A 353 KNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPG 432 (677)
T ss_dssp EESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTT
T ss_pred ccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccc
Confidence 542110 0111 15688998888877543
Q ss_pred -----------------------CCcEEEEEcCCCeeEEEeecC
Q psy15157 307 -----------------------DSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 307 -----------------------dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.|.|..||+.+|+.+-.++..
T Consensus 433 ~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~ 476 (677)
T 1kb0_A 433 KPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV 476 (677)
T ss_dssp STTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES
T ss_pred ccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC
Confidence 278999999999998888754
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.21 E-value=3.6e-05 Score=72.68 Aligned_cols=187 Identities=13% Similarity=0.156 Sum_probs=112.3
Q ss_pred EEEEECCCCCEEEEEeCCCe-------------------EEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc----
Q psy15157 123 RAGAFSIDGQLCATGSVDAS-------------------IKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI---- 179 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~dg~-------------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---- 179 (344)
..+++.++..+++.++.++. |..+|..++....... ...|.
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~----------------~~~~~~wd~ 296 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ----------------VTPGDSWDF 296 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE----------------SSTTCCSCC
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEee----------------cCCCccccc
Confidence 35678888888888877663 7778876654333211 11111
Q ss_pred ---CCeEEEEEcCCCC---EEEEEeCCCcEEEEEcCCCccccceeeec----------cccce-----------------
Q psy15157 180 ---EEVTCLEFHPSAP---ILASGSKDKTVKMFDYSKSSVRKAHKTIQ----------ESTFV----------------- 226 (344)
Q Consensus 180 ---~~v~~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~v----------------- 226 (344)
.+.....+..+++ .++.++.+|.++++|..+++.+....... ...++
T Consensus 297 ~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~ 376 (668)
T 1kv9_A 297 TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPS 376 (668)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSC
T ss_pred cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCC
Confidence 2222222333554 68889999999999999987653222111 00000
Q ss_pred -------EEEEEecCCCEEEEEeCCCEEEEE------cCCCCE----------EE-EEeCCCcEEEEeCCCCeEEeeecc
Q psy15157 227 -------RCLSFHPCGDYMVVGTDHFVLRLY------SSDGRI----------YC-SGSKDGDIKIWDGVSSKCVATFSK 282 (344)
Q Consensus 227 -------~~~~~~~~~~~l~~~~~~~~i~~~------~~~~~~----------l~-~~~~dg~i~iwd~~~~~~~~~~~~ 282 (344)
..++++|+...+++...+-..... .+.+.. .+ ....+|.|..||..+++.+.....
T Consensus 377 ~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~ 456 (668)
T 1kv9_A 377 PFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY 456 (668)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE
T ss_pred CccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC
Confidence 115667766666654432211111 110000 00 223458899999999998877653
Q ss_pred cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 283 ~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.. +.....+...+.+++.++.||.|++||.++|+.+..++...
T Consensus 457 ~~---~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 457 PT---HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp SS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CC---CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 22 23333445578899999999999999999999999997653
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.19 E-value=0.00021 Score=57.75 Aligned_cols=152 Identities=14% Similarity=0.113 Sum_probs=103.0
Q ss_pred ceEEEecCCcC--CeEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCC
Q psy15157 170 PVIRTLYDHIE--EVTCLEFHPSAPILASGSKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDH 244 (344)
Q Consensus 170 ~~~~~~~~h~~--~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~ 244 (344)
+.+.++ .|.. -...+.|++ +.++.+.+.+| .|+.+|+.+++........... .-..+++ .++.++.. -.+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~--~~~~ly~ltw~~ 84 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVA--WRDRLIQLTWRN 84 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEE--ETTEEEEEESSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEE--eCCEEEEEEeeC
Confidence 445555 5543 456899986 56777777754 8999999999876655443221 1222333 34455444 456
Q ss_pred CEEEEE--------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC---ccEEEEEEccCCCEE
Q psy15157 245 FVLRLY--------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG---AEISSLTFTRNGKYL 301 (344)
Q Consensus 245 ~~i~~~--------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l 301 (344)
+.+.+| .+++..|+.+..++.|.++|..+.+.+..+.-...+ ..++-+.|. +|+..
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred CEEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 777776 345666666677889999999999888777643221 236777776 67655
Q ss_pred EEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 302 LSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 302 ~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+..-.+..|.+.|.++|+.+..+.-.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECG
T ss_pred EEECCCCeEEEEECCCCCEEEEEECC
Confidence 55556889999999999999998754
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.18 E-value=0.00027 Score=61.63 Aligned_cols=132 Identities=9% Similarity=0.015 Sum_probs=83.9
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccc-----eEEEEEec--CCCEEEEEeCCCEEEEEcC------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-----VRCLSFHP--CGDYMVVGTDHFVLRLYSS------------ 252 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----v~~~~~~~--~~~~l~~~~~~~~i~~~~~------------ 252 (344)
..++.++.++.|..+|..+++............. +..+...| .+..+++++.++.+..+++
T Consensus 189 ~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~ 268 (376)
T 3q7m_A 189 GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG 268 (376)
T ss_dssp TEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC
T ss_pred CEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC
Confidence 4677788899999999998876544432111000 00000011 2455666666665555422
Q ss_pred -------CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 253 -------DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 253 -------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
++..++.++.++.|..+|..+++.+........ ..+.+... .+..|+.++.+|.|+++|..+|+.+..+.
T Consensus 269 ~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 269 SVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp CEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTT-SCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCC-CcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 345667788899999999999988766542111 12333333 25678889999999999999999988877
Q ss_pred c
Q psy15157 326 G 326 (344)
Q Consensus 326 ~ 326 (344)
.
T Consensus 346 ~ 346 (376)
T 3q7m_A 346 V 346 (376)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.17 E-value=8.4e-05 Score=67.79 Aligned_cols=161 Identities=13% Similarity=0.097 Sum_probs=110.0
Q ss_pred CCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEE-c-CCCCEEEEEe-------
Q psy15157 130 DGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEF-H-PSAPILASGS------- 198 (344)
Q Consensus 130 ~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-~-~~~~~l~s~~------- 198 (344)
||+++..... ++.|.+.|+.++. ....+. ........+++ + |++.+++.++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~------------------~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~ 161 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMK------------------CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLV 161 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTE------------------EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESS
T ss_pred CCCEEEEEcCCCCEEEEEECCCce------------------EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccC
Confidence 7887666554 5679999997642 223221 12234678887 4 8888887774
Q ss_pred -----------CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC---------------EEEEE--
Q psy15157 199 -----------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF---------------VLRLY-- 250 (344)
Q Consensus 199 -----------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---------------~i~~~-- 250 (344)
.++.+.+.|..+.+....+...+ ....++++|+|+++++.+.+. .+.++
T Consensus 162 ~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~ 238 (595)
T 1fwx_A 162 NDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNI 238 (595)
T ss_dssp CSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEH
T ss_pred CCCcccccccccCceEEEEECCCCeEEEEEEeCC---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeec
Confidence 34679999999876655555432 234577999999999988653 34443
Q ss_pred ------cCCCCEEEEEeCCCcEEEEeCCC--CeE-EeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCC
Q psy15157 251 ------SSDGRIYCSGSKDGDIKIWDGVS--SKC-VATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSA 318 (344)
Q Consensus 251 ------~~~~~~l~~~~~dg~i~iwd~~~--~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~ 318 (344)
.++|++... +.|.+.|.++ ++. +..+.... ...++.++|||+++++++ .+.+|.++|+.+.
T Consensus 239 ~~~~~~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 239 AEIEKAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp HHHHHHHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEEES---SCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred cceeEeccCCCeeEE----CcEEEEeCcccCCceeEEEEecCC---CceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 345655443 4599999998 544 45554332 357899999999887665 6889999999865
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.16 E-value=0.00066 Score=59.11 Aligned_cols=182 Identities=12% Similarity=0.044 Sum_probs=98.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 209 (344)
.+..+++++.++.|..+|..++............ .........+.+.. ..++..++.++.++.|..+|..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~ 121 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKD---------GWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTS 121 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC------------CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETT
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCcccc---------ccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECC
Confidence 3567777888899999998765433221100000 00000012222211 1234577778889999999999
Q ss_pred CCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC--------------------------CCCEEEEEeCC
Q psy15157 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--------------------------DGRIYCSGSKD 263 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~--------------------------~~~~l~~~~~d 263 (344)
+++........... ...... .+..+++++.++.+..+++ .+..++.++.+
T Consensus 122 tG~~~W~~~~~~~~--~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~ 197 (376)
T 3q7m_A 122 DGTVAWQTKVAGEA--LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDN 197 (376)
T ss_dssp TCCEEEEEECSSCC--CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTT
T ss_pred CCCEEEEEeCCCce--EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCC
Confidence 88765444322111 111111 2446666776776665521 12456677888
Q ss_pred CcEEEEeCCCCeEEeeecccCCCcc-----EEEEEEcc--CCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAE-----ISSLTFTR--NGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~-----v~~i~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+.+..+|..+++.+........... +..+.-.| .+..++.++.++.+..+|.++|+.+..+.
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~ 266 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 266 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc
Confidence 9999999999987765542210000 00000011 23456666677777777777777665554
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.16 E-value=8.4e-05 Score=70.45 Aligned_cols=133 Identities=12% Similarity=0.187 Sum_probs=80.0
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC---CCCEEEEEe-----CCCc
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP---SAPILASGS-----KDKT 202 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~-----~dg~ 202 (344)
+..++.++.|+.|..+|..++.......... +......+..+| ++..++..+ .+|.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~----------------~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~ 184 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRA----------------DHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGY 184 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCS----------------CTTSCCBCCSCCEEETTEEEECCBCTTTCCBCE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcC----------------CCCCCccccCCcEEECCEEEEEeCCCccCCCCE
Confidence 5678888899999999998765443221100 000000001111 343333222 3789
Q ss_pred EEEEEcCCCccccceeeecc-----------------------------ccceEEEEEecCCCEEEEEeCCCE-------
Q psy15157 203 VKMFDYSKSSVRKAHKTIQE-----------------------------STFVRCLSFHPCGDYMVVGTDHFV------- 246 (344)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~~~~------- 246 (344)
|+.||..+++....+..... ......++++|++..+++++.++.
T Consensus 185 v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~ 264 (689)
T 1yiq_A 185 VTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWR 264 (689)
T ss_dssp EEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHH
T ss_pred EEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCC
Confidence 99999999986554432110 001125788898888988887753
Q ss_pred ------------EEEEcC--------------------------------CCC---EEEEEeCCCcEEEEeCCCCeEEee
Q psy15157 247 ------------LRLYSS--------------------------------DGR---IYCSGSKDGDIKIWDGVSSKCVAT 279 (344)
Q Consensus 247 ------------i~~~~~--------------------------------~~~---~l~~~~~dg~i~iwd~~~~~~~~~ 279 (344)
+..+++ +|+ .++.++.+|.++++|.++|+.+..
T Consensus 265 ~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 265 SQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp HTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 444310 122 577888999999999999998743
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=98.14 E-value=0.0014 Score=55.94 Aligned_cols=174 Identities=13% Similarity=0.238 Sum_probs=109.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC----CC---EEE-EEeC--
Q psy15157 130 DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS----AP---ILA-SGSK-- 199 (344)
Q Consensus 130 ~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~---~l~-s~~~-- 199 (344)
...+++.....+-+.+||+. ++.+..+.. +.++.+..-|+ ++ +++ +.-.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-------------------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~ 97 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-------------------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEG 97 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-------------------SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTT
T ss_pred CccEEEEEcCCCCEEEEcCC-------------------CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCC
Confidence 44566666778889999995 445555543 55666666552 22 233 3333
Q ss_pred CCcEEEEEcC--CCcccccee-----eeccccceEEEEE--ecC-CC-EEEEEeCCCEEEEE------------------
Q psy15157 200 DKTVKMFDYS--KSSVRKAHK-----TIQESTFVRCLSF--HPC-GD-YMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 200 dg~i~iwd~~--~~~~~~~~~-----~~~~~~~v~~~~~--~~~-~~-~l~~~~~~~~i~~~------------------ 250 (344)
+++|.+|++. ++.. ..+. .......+..+++ +|. +. ++++...++.+..|
T Consensus 98 ~n~l~vf~iDp~~~~l-~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTL-QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCCE-EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCce-eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5889999774 3322 1111 0011134555666 674 43 67888888888876
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCC-----CCeEEeeecccCCCccEEEEEE--ccCCC-EEEEEe-CCCcE
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGV-----SSKCVATFSKAHDGAEISSLTF--TRNGK-YLLSSG-KDSLV 310 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~~~~~~~v~~i~~--~~~~~-~l~s~~-~dg~i 310 (344)
++....|+.+-.+.-|..+|.+ +++.+..+...+-...+..|++ .++++ ||++++ .++..
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred cCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 5667788888888777777855 3455555532322235788877 45566 666666 67789
Q ss_pred EEEEcC-CCeeEEEee
Q psy15157 311 KLWELS-SARCLIAYT 325 (344)
Q Consensus 311 ~vwd~~-~~~~~~~~~ 325 (344)
.+||.. +.+.+..|.
T Consensus 257 ~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 257 AIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEESSTTCCEEEEEE
T ss_pred EEEECCCCCcEEEEEE
Confidence 999997 678888886
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00021 Score=58.83 Aligned_cols=154 Identities=10% Similarity=0.037 Sum_probs=97.3
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcE
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTV 203 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 203 (344)
.+++. .+++.++.-.++.+.++|..+. +.+.++..-... ...++++++.++.+..++.|
T Consensus 70 Gi~~~-g~~lyv~t~~~~~v~viD~~t~------------------~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l 128 (266)
T 2iwa_A 70 GLTLL-NEKLYQVVWLKNIGFIYDRRTL------------------SNIKNFTHQMKD--GWGLATDGKILYGSDGTSIL 128 (266)
T ss_dssp EEEEE-TTEEEEEETTCSEEEEEETTTT------------------EEEEEEECCSSS--CCEEEECSSSEEEECSSSEE
T ss_pred EEEEe-CCEEEEEEecCCEEEEEECCCC------------------cEEEEEECCCCC--eEEEEECCCEEEEECCCCeE
Confidence 34444 2344555556889999998653 334444211111 12345577766666678999
Q ss_pred EEEEcCCCccccceeeecccc---ceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeee
Q psy15157 204 KMFDYSKSSVRKAHKTIQEST---FVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATF 280 (344)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 280 (344)
.++|..+.+....+....... .++.+.|. +| .++ +....++.|.+.|..+++.+..+
T Consensus 129 ~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~ly------------------vn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 129 YEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVW------------------ANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp EEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEE------------------EEETTSSEEEEEETTTCCEEEEE
T ss_pred EEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEE------------------EecCCCCeEEEEECCCCcEEEEE
Confidence 999998877655554432222 25566665 33 232 24445778999999999988877
Q ss_pred ccc-----------CCCccEEEEEEccCCCEE-EEEeCCCcEEEEEcCCC
Q psy15157 281 SKA-----------HDGAEISSLTFTRNGKYL-LSSGKDSLVKLWELSSA 318 (344)
Q Consensus 281 ~~~-----------~~~~~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~ 318 (344)
... ......+.|+|+|+++.+ +++...+.|++.++...
T Consensus 189 ~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 189 LLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 532 111246999999998765 55557888999888664
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00025 Score=66.91 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=47.9
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEcCC
Q psy15157 124 AGAFSI-DGQLCATGSVDA-----------SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPS 190 (344)
Q Consensus 124 ~~~~s~-~~~~l~sg~~dg-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~ 190 (344)
++++.+ ++++++.|+.+. .+.+||..+. .+..+..+ ..+.....++++..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~----------------~w~~~~~~~~~~~~~~~~~~~~~~ 253 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG----------------IVSDRTVTVTKHDMFCPGISMDGN 253 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC----------------CBCCCEEEECSCCCSSCEEEECTT
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC----------------cEEeCcccCCCCCCccccccCCCC
Confidence 556666 888888887643 5778887642 12222222 223333445677889
Q ss_pred CCEEEEEeC-CCcEEEEEcCCCcc
Q psy15157 191 APILASGSK-DKTVKMFDYSKSSV 213 (344)
Q Consensus 191 ~~~l~s~~~-dg~i~iwd~~~~~~ 213 (344)
+.+++.|+. +..+.+||..+.+.
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSW 277 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEE
T ss_pred CCEEEeCCCCCCceEEecCcCCce
Confidence 999999884 46899999877543
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.02 E-value=0.0003 Score=59.84 Aligned_cols=168 Identities=14% Similarity=0.046 Sum_probs=98.7
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..+.++...+++. +..|+.++.|..||.. +.....+......+.++...+++.+++. +
T Consensus 137 ~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-------------------g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t- 194 (330)
T 3hxj_A 137 AIYATPIVSEDGT-IYVGSNDNYLYAINPD-------------------GTEKWRFKTNDAITSAASIGKDGTIYFG-S- 194 (330)
T ss_dssp CCCSCCEECTTSC-EEEECTTSEEEEECTT-------------------SCEEEEEECSSCCCSCCEECTTCCEEEE-S-
T ss_pred ceeeeeEEcCCCE-EEEEcCCCEEEEECCC-------------------CCEeEEEecCCCceeeeEEcCCCEEEEE-e-
Confidence 3445555555555 4445566777777764 2222233333445566677777765544 3
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCC---------------------CCEEE
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD---------------------GRIYC 258 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~---------------------~~~l~ 258 (344)
+.|..+| .+++...... .....+.++..+++|. +.+++.++.+..++++ +..+.
T Consensus 195 -~~l~~~d-~~g~~~~~~~--~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 269 (330)
T 3hxj_A 195 -DKVYAIN-PDGTEKWNFY--AGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIY 269 (330)
T ss_dssp -SSEEEEC-TTSCEEEEEC--CSSCCCSCCEECTTSC-EEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEE
T ss_pred -CEEEEEC-CCCcEEEEEc--cCCcceeceEECCCCe-EEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEE
Confidence 7889999 5554332222 2234466677777664 4455555555544221 23455
Q ss_pred EEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
.++.+|.|..+|. +++....+... ...+.++..+++|+ |+.++.+|.+++......
T Consensus 270 v~t~~ggl~~~d~-~g~~~~~~~~~--~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 270 FGSYDGHLYAINP-DGTEKWNFETG--SWIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp EECTTCEEEEECT-TSCEEEEEECS--SCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred EecCCCCEEEECC-CCcEEEEEEcC--CccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 6788888999995 67766555422 23467777777776 566888999998876543
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00034 Score=57.16 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=83.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEe
Q psy15157 182 VTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGS 261 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~ 261 (344)
...+.|+ ++.++.+.+.+|.|+++|+.+++..... .. .......+++ .++.|+ +..-
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~--~g~~Ly------------------~ltw 113 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLAS--DGERLY------------------QLTW 113 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEE--CSSCEE------------------EEES
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEE--eCCEEE------------------EEEc
Confidence 4688887 4567888888999999999999876655 32 2212222333 333333 3455
Q ss_pred CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 262 KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 262 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.++.+.+||..+.+.+.++.....+ ..++ +|++.|+.+..++.|.++|..+.+.+.++.-
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~~eG---wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYSGEG---WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECSSCC---CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCCEEEEEECCcCcEEEEEeCCCce---eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 7889999999999999998744332 3444 4678888877799999999999998888764
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00023 Score=58.07 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=86.0
Q ss_pred EEEecCCcCC--eEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEE
Q psy15157 172 IRTLYDHIEE--VTCLEFHPSAPILASGSKDK--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 172 ~~~~~~h~~~--v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i 247 (344)
+.++ .|... ...+.|+ ++.++.+.+.+| .|+++|+.+++.......... .....+++ .++.++.
T Consensus 34 v~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~--~g~~ly~------- 101 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISD--WKDKIVG------- 101 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEE--ETTEEEE-------
T ss_pred EEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEE--eCCEEEE-------
Confidence 4444 45443 4788898 677777888776 899999999987655543221 11122333 2333332
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 248 RLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 248 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
..-.++.+.+||..+.+.+.++.-...+ ..++ ++++.|+.+..++.|.++|..+.+.+.++.-
T Consensus 102 -----------ltw~~~~v~v~D~~t~~~~~ti~~~~eG---~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 102 -----------LTWKNGLGFVWNIRNLRQVRSFNYDGEG---WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp -----------EESSSSEEEEEETTTCCEEEEEECSSCC---CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred -----------EEeeCCEEEEEECccCcEEEEEECCCCc---eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 4456889999999999999988744332 2344 4677777776688899999999988888764
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00074 Score=60.15 Aligned_cols=157 Identities=11% Similarity=0.166 Sum_probs=88.6
Q ss_pred ceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
....++++| ++..|..+...+.|+.+|.... .+..+.........++|+++++.|+.+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-------------------~v~~~~~~~~~P~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-------------------YVSTVYSGLSKVRTICWTHEADSMIITND 198 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-------------------EEEEEECCCSCEEEEEECTTSSEEEEEEC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-------------------EEEEEecCCCCcceEEEeCCCCEEEEEeC
Confidence 457889997 3555555555578888887531 22333334556889999999995555443
Q ss_pred -CC----cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 200 -DK----TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 200 -dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++ .+...+ ..+...... ..........++++|++ |.++++-..++.|..||...+
T Consensus 199 ~~~~~~~~v~~~~-~~g~~~~~~-~l~~~~~p~giavdp~~------------------g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 199 QNNNDRPNNYILT-RESGFKVIT-ELTKGQNCNGAETHPIN------------------GELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp CSCTTSEEEEEEE-GGGTSCSEE-EEEECSSCCCEEECTTT------------------CCEEEEETTTTEEEEEETTTT
T ss_pred CCCcccceEEEEe-CCCceeeee-eeccCCCceEEEEeCCC------------------CEEEEEECCCCEEEEEECCCC
Confidence 22 233333 333322111 11112234556677732 222334445567777777665
Q ss_pred eEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCC
Q psy15157 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSS 317 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~ 317 (344)
.......... ....+.++|+|+|++|+.+ ...+.|+.++...
T Consensus 259 ~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 259 ETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 5422222111 1346889999999965544 5678899988753
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.95 E-value=0.0011 Score=61.55 Aligned_cols=137 Identities=14% Similarity=0.217 Sum_probs=85.1
Q ss_pred CCCC---EEEEEeCCCcEEEEEcCCCccccceeeeccc-----------cc-----------------------------
Q psy15157 189 PSAP---ILASGSKDKTVKMFDYSKSSVRKAHKTIQES-----------TF----------------------------- 225 (344)
Q Consensus 189 ~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~----------------------------- 225 (344)
.+|+ .++.++.+|.++++|..+++.+......... .+
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 4563 7888999999999999998765443321100 00
Q ss_pred ---eEEEEEecCCCEEEEEeCCCEEEEEcC-----CCCEEEE---------EeCCCcEEEEeCCCCeEEeeecccCCCcc
Q psy15157 226 ---VRCLSFHPCGDYMVVGTDHFVLRLYSS-----DGRIYCS---------GSKDGDIKIWDGVSSKCVATFSKAHDGAE 288 (344)
Q Consensus 226 ---v~~~~~~~~~~~l~~~~~~~~i~~~~~-----~~~~l~~---------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 288 (344)
-..++++|+...+++...+-...++.. .|..++. ...+|.|.-||+.+++.+....... +
T Consensus 411 g~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~---~ 487 (582)
T 1flg_A 411 GKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL---P 487 (582)
T ss_dssp SSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS---C
T ss_pred ccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC---C
Confidence 013456666666666554433333211 1111100 1246889999999999887665322 1
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 289 v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+..-.....+.+++.++.||.++.||.++|+.+.+++...
T Consensus 488 ~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 488 LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 2221222346788889999999999999999999998654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0072 Score=52.88 Aligned_cols=187 Identities=11% Similarity=-0.017 Sum_probs=109.6
Q ss_pred CCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEE
Q psy15157 118 HKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 195 (344)
....+..++|++.+. ++.+-...+.|..++.+.. .....+.........+++.+.+. +++
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~------------------~~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS------------------NVEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------CEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC------------------CcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 345678999997544 5555556788888887531 11122222223456788887544 556
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEE-----------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLY----------------------- 250 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~----------------------- 250 (344)
+-...+.|.+.++..... ..+ ..........++++|.+..|+..... +.|..+
T Consensus 176 ~d~~~~~I~~~~~dg~~~-~~l-~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlav 253 (386)
T 3v65_B 176 TDSGTSRIEVANLDGAHR-KVL-LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTI 253 (386)
T ss_dssp EETTTTEEEECBTTSCSC-EEE-ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred EcCCCCeEEEEeCCCCce-EEe-ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEE
Confidence 666678888888765422 111 12233457889999877777665533 455544
Q ss_pred cCC-CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 251 SSD-GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 251 ~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+++ ++++++-...+.|..+|.........+. .. ......+++ ..+..+++....+.|..++..+|+.+..+...
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~-~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 254 DYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QG-LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EGGGTEEEEEETTTTEEEEECTTSCSCEEEEC-SS-CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECS
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE-CC-CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccC
Confidence 332 2333344445667777765432222222 11 124677888 35566666667888999997788777666543
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.0065 Score=50.00 Aligned_cols=159 Identities=12% Similarity=0.071 Sum_probs=93.5
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 120 SPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 120 ~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
.....+++++++. ++++-...+.|.+++.+... . .............++++|++..|+.+.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~----------------~--~~~~~~~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ----------------R--RVLFDTGLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----------------C--EEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC----------------E--EEEEECCCCCccEEEEeeCCCEEEEEE
Confidence 5789999998655 45555557789999885210 0 111111224568999999655544444
Q ss_pred C---CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEEcCCC--------------------
Q psy15157 199 K---DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYSSDG-------------------- 254 (344)
Q Consensus 199 ~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~~~~~-------------------- 254 (344)
. .+.|..+++.... ...+. .........+++++++..|+++. ..+.|..+++++
T Consensus 141 ~~~~~~~I~~~~~dg~~-~~~~~-~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~ 218 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTN-RRILA-QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYG 218 (267)
T ss_dssp CCSSSCEEEEEETTSCC-CEEEE-CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEET
T ss_pred CCCCCcEEEEEecCCCC-cEEEE-ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeC
Confidence 3 4688888876432 22221 12234578899999887776655 456676664332
Q ss_pred C-EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC
Q psy15157 255 R-IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299 (344)
Q Consensus 255 ~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 299 (344)
. ++++....+.|..+|..+++.+..+..... .....+++.|++.
T Consensus 219 ~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~-~~p~gi~~~~~~~ 263 (267)
T 1npe_A 219 KNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQ-TRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEECCSSC-CCCCCEEEECSCC
T ss_pred CEEEEEECCCCeEEEEeCCCCCceEEEccccc-cccceeeecCccC
Confidence 2 333333456777777777777766643221 1245666666653
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.87 E-value=0.012 Score=51.77 Aligned_cols=193 Identities=11% Similarity=-0.035 Sum_probs=111.6
Q ss_pred cCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CCCEE
Q psy15157 117 SHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SAPIL 194 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l 194 (344)
.....+..++|++.+. ++.+-...+.|+.++++.... .......+.........+++.+ .++++
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~--------------~~~~~~~~~~~~~~p~glavD~~~~~lY 174 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG--------------VSSYDTVISRDIQAPDGLAVDWIHSNIY 174 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC--------------------CCCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC--------------CCcceEEEeCCCCCcccEEEEecCCceE
Confidence 3456788999998555 444444567888888753100 0111222333445678899988 45566
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEE----------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLY---------------------- 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~---------------------- 250 (344)
++-...+.|.+.++......... .........++++|.+.+|+.... .+.|...
T Consensus 175 ~~d~~~~~I~~~~~~g~~~~~l~--~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~gla 252 (400)
T 3p5b_L 175 WTDSVLGTVSVADTKGVKRKTLF--RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT 252 (400)
T ss_dssp EEETTTTEEEEECTTTCSEEEEE--ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEECCCCeEEEEeCCCCceEEEE--eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEE
Confidence 66667789999998754322211 223345788999997777766552 2444443
Q ss_pred -cCCCCEE-EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 251 -SSDGRIY-CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 251 -~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++++..| ++-...+.|..+|+........+..........++++. .+.++++-...+.|..+|..+|+.+..+..
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 253 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred EEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 4333333 33344566777776543322222211111235677774 445666667778899999888877666653
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0011 Score=56.27 Aligned_cols=165 Identities=12% Similarity=0.065 Sum_probs=96.5
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSK 210 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 210 (344)
+..+..++.++.|..+|.. + ........+...+.++...+++. ++.++.++.|..+|..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g------------------~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~- 165 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-G------------------TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD- 165 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-S------------------CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-
T ss_pred CCEEEEEecCCEEEEEcCC-C------------------CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-
Confidence 3445566667777777753 1 22222223333455566666666 5557778999999987
Q ss_pred CccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCCCcEEE
Q psy15157 211 SSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKDGDIKI 268 (344)
Q Consensus 211 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~i~i 268 (344)
++...... .....+.++...+++... +++ +.+..+ +++| .+..++.++.|..
T Consensus 166 g~~~~~~~--~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~~gl~~ 239 (330)
T 3hxj_A 166 GTEKWRFK--TNDAITSAASIGKDGTIY-FGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDG-TIYVTSLDGHLYA 239 (330)
T ss_dssp SCEEEEEE--CSSCCCSCCEECTTCCEE-EES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTS-CEEEEETTTEEEE
T ss_pred CCEeEEEe--cCCCceeeeEEcCCCEEE-EEe--CEEEEECCCCcEEEEEccCCcceeceEECCCC-eEEEEcCCCeEEE
Confidence 55433332 223345556666666543 344 333333 3344 3455677788888
Q ss_pred EeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+|. +++.+..+.... ..+.++.+.+++. |..++.+|.|..+|. +++.+..+...
T Consensus 240 ~~~-~g~~~~~~~~~~--~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~ 293 (330)
T 3hxj_A 240 INP-DGTEKWRFKTGK--RIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETG 293 (330)
T ss_dssp ECT-TSCEEEEEECSS--CCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECS
T ss_pred ECC-CCCEeEEeeCCC--CccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcC
Confidence 874 555555554222 2234456665664 677788889999996 78877777643
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0041 Score=55.31 Aligned_cols=117 Identities=20% Similarity=0.258 Sum_probs=69.3
Q ss_pred CCCceEEEEECCCCCEEEEEeC-CC----eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC-CC
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSV-DA----SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP-SA 191 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 191 (344)
.......++|+++|++|+.+.. ++ .+.+++... .......+. .......++++| ++
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-----------------~~~~~~~l~-~~~~p~giavdp~~g 238 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-----------------GFKVITELT-KGQNCNGAETHPING 238 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-----------------TSCSEEEEE-ECSSCCCEEECTTTC
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-----------------ceeeeeeec-cCCCceEEEEeCCCC
Confidence 4456889999999995555544 22 233333321 011011111 123356788999 67
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEEcCC
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSD 253 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~~~~ 253 (344)
.++++-..++.|..+|...+.... +...........++|+|+|++|+++ ...+.|..++.+
T Consensus 239 ~lyv~d~~~~~V~~~~~~~~~~~~-~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 239 ELYFNSWNAGQVFRYDFTTQETTP-LFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEE-EEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEE-EEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 777777678899999987654321 1112222456789999999966555 456677776544
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0023 Score=59.40 Aligned_cols=136 Identities=14% Similarity=0.205 Sum_probs=87.8
Q ss_pred CCC---CEEEEEeCCCcEEEEEcCCCccccceeeec-----------cccce--------------------------EE
Q psy15157 189 PSA---PILASGSKDKTVKMFDYSKSSVRKAHKTIQ-----------ESTFV--------------------------RC 228 (344)
Q Consensus 189 ~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v--------------------------~~ 228 (344)
.+| ..++.++.+|.+.++|..+++.+....... ...++ ..
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 397 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGH 397 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCC
Confidence 456 467778899999999999987654433211 00011 24
Q ss_pred EEEecCCCEEEEEeCCCEEEEEc-----CCCCE-------EEE--Ee------CCCcEEEEeCCCCeEEeeecccCCCcc
Q psy15157 229 LSFHPCGDYMVVGTDHFVLRLYS-----SDGRI-------YCS--GS------KDGDIKIWDGVSSKCVATFSKAHDGAE 288 (344)
Q Consensus 229 ~~~~~~~~~l~~~~~~~~i~~~~-----~~~~~-------l~~--~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 288 (344)
++++|+..++++...+....... ..+.. +.. .+ .+|.|.-||+.+++.+....... +
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~---~ 474 (599)
T 1w6s_A 398 DSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF---A 474 (599)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS---C
T ss_pred ccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC---C
Confidence 67888888888876554333221 11111 111 01 45889999999999887764221 1
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 289 v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
..+-.+...+..++.++.||.++.||.++|+.+.+++-.
T Consensus 475 ~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 475 VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 111112335678888999999999999999999998754
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.014 Score=50.35 Aligned_cols=185 Identities=11% Similarity=-0.003 Sum_probs=109.6
Q ss_pred CCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CEEEE
Q psy15157 119 KSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s 196 (344)
...+..++|++.+. ++.+-...+.|..++.+.. .....+.........+++.+.+ .++++
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~------------------~~~~~~~~~~~~p~glavd~~~g~ly~~ 133 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGS------------------NVEEVVSTGLESPGGLAVDWVHDKLYWT 133 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------SCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCC------------------CceEEEeCCCCCccEEEEecCCCeEEEE
Confidence 34578999997555 4445456788888887531 1111222223345688888754 45566
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEE-----------------------c
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLY-----------------------S 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~-----------------------~ 251 (344)
-...+.|.+.++..... ..+ ..........++++|.+..++..... +.|..+ +
T Consensus 134 d~~~~~I~~~~~dG~~~-~~l-~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d 211 (349)
T 3v64_C 134 DSGTSRIEVANLDGAHR-KVL-LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTID 211 (349)
T ss_dssp ETTTTEEEEEETTSCSC-EEE-ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEE
T ss_pred cCCCCeEEEEcCCCCce-EEE-EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEe
Confidence 66678999999875432 211 12233456889999977766665432 455544 4
Q ss_pred CCC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 252 SDG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 252 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+++ .++++-...+.|..+|.........+. .. .....++++. ++..+++-...+.|..++..+|+.+..+..
T Consensus 212 ~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~-~~-~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 212 YAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QG-LPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS-CSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCCEEEEEECCCCEEEEEeCCCCceEEEEe-CC-CCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEecc
Confidence 333 333444445667777765432222222 11 1346778883 556666666788899998777776666653
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0018 Score=59.87 Aligned_cols=136 Identities=15% Similarity=0.181 Sum_probs=88.3
Q ss_pred CCCC---EEEEEeCCCcEEEEEcCCCccccceeeecc-----------ccce--------------------------EE
Q psy15157 189 PSAP---ILASGSKDKTVKMFDYSKSSVRKAHKTIQE-----------STFV--------------------------RC 228 (344)
Q Consensus 189 ~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~v--------------------------~~ 228 (344)
.+|+ .++.++.+|.+.++|..+++.+........ ..++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4663 577888899999999999876544332210 0111 23
Q ss_pred EEEecCCCEEEEEeCCCEEEEEcC-----CCCEEEEE--------------eCCCcEEEEeCCCCeEEeeecccCCCccE
Q psy15157 229 LSFHPCGDYMVVGTDHFVLRLYSS-----DGRIYCSG--------------SKDGDIKIWDGVSSKCVATFSKAHDGAEI 289 (344)
Q Consensus 229 ~~~~~~~~~l~~~~~~~~i~~~~~-----~~~~l~~~--------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 289 (344)
++++|++..+++...+....++.. .|..+ .| ..+|.|..||..+++.+..+.... .+
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~---~~ 466 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFF-VGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF---AA 466 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCC-CCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS---CC
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCcc-ccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC---Cc
Confidence 578888888888766544333311 11111 11 246899999999999887765322 12
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 290 ~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.+..+...+..++.++.||.|+.||.++|+.+.+++...
T Consensus 467 ~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 467 WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 222233356678889999999999999999999998543
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.032 Score=53.73 Aligned_cols=183 Identities=9% Similarity=0.089 Sum_probs=110.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..|.++...++|.+- .|+.++-|..|+..+......... .. .-.-....|.++...+++.+ ..|+.
T Consensus 310 ~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~-------~~-----~~~l~~~~V~~i~~d~~g~l-WiGt~ 375 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNI-------PY-----KNSLSDNVVSCIVEDKDKNL-WIGTN 375 (795)
T ss_dssp SCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCC-------TT-----SSSCSCSSEEEEEECTTSCE-EEEES
T ss_pred CcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCC-------CC-----CCCCCCCeeEEEEECCCCCE-EEEEC
Confidence 568899888888754 455666788888653211110000 00 00012456899998888864 44777
Q ss_pred CCcEEEEEcCCCccccceeee------ccccceEEEEEecCCCEEEEEeCCCEEEEEc----------------------
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTI------QESTFVRCLSFHPCGDYMVVGTDHFVLRLYS---------------------- 251 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~---------------------- 251 (344)
++-|..||..++......... .....|.++..+++|..|.+|+.++-+..|+
T Consensus 376 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~ 455 (795)
T 4a2l_A 376 DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY 455 (795)
T ss_dssp SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE
T ss_pred CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE
Confidence 778999998765432211100 1235689999988888566777644444442
Q ss_pred -----CCCCEEEEEeCCCcEEEEeCCCCeEEeeecc----cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCee
Q psy15157 252 -----SDGRIYCSGSKDGDIKIWDGVSSKCVATFSK----AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320 (344)
Q Consensus 252 -----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 320 (344)
++|.+. .|+. +-+.+||..+++....... ......|.++..+++|++.+.. . +-|..||..+++.
T Consensus 456 ~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 456 AILPDGEGNLW-LGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI 529 (795)
T ss_dssp EEEECSSSCEE-EEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE
T ss_pred EEEECCCCCEE-EEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE
Confidence 234433 3444 4588899887765433211 1112468999999988865544 4 5588999887765
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0028 Score=53.91 Aligned_cols=166 Identities=9% Similarity=0.042 Sum_probs=85.7
Q ss_pred ceEEEEECC-CCCEEEEEeC-----------------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCe
Q psy15157 121 PCRAGAFSI-DGQLCATGSV-----------------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEV 182 (344)
Q Consensus 121 ~v~~~~~s~-~~~~l~sg~~-----------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 182 (344)
..+.+++.+ +|++.++-.. ++.|..||..++ . ...+.......
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~------------------~-~~~~~~~~~~p 187 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK------------------E-TTLLLKELHVP 187 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT------------------E-EEEEEEEESCC
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC------------------E-EEEeccCCccC
Confidence 468899999 8887766432 356777776432 1 11111112234
Q ss_pred EEEEEcCCCCEEE-EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEe
Q psy15157 183 TCLEFHPSAPILA-SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGS 261 (344)
Q Consensus 183 ~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~ 261 (344)
..++|+++++.|+ +-+.++.|.+|++................ ...++++++|.+.++....... .+. -+
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~---~~~------~~ 257 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG---NMH------GR 257 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS---STT------SC
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc---ccc------CC
Confidence 6789999998554 44567899999987532111001011112 5667888877654443220000 000 00
Q ss_pred CCCcEEEEeCCCCeEEeeecccCC--CccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 262 KDGDIKIWDGVSSKCVATFSKAHD--GAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 262 ~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
..+.|..+|. .++.+..+..... ...+.++++ .++++.++....+.|.++++..
T Consensus 258 ~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 258 VDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 0233455553 2443333321110 123566666 3666666666788899998754
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.017 Score=48.91 Aligned_cols=190 Identities=13% Similarity=-0.028 Sum_probs=109.1
Q ss_pred CCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-CEEEE
Q psy15157 119 KSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA-PILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s 196 (344)
...+..++|++.++ ++.+-..++.|..++++... ........+.........+++.+.+ .++++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~--------------~~~~~~~~~~~~~~~p~glavd~~~~~ly~~ 94 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH--------------GVSSYDTVISRDIQAPDGLAVDWIHSNIYWT 94 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------CEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCC--------------CCcccEEEEeCCCCCcCEEEEeecCCeEEEE
Confidence 45678999998654 55555567889999885310 0001111222222345788998744 45566
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEE-----------------------c
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLY-----------------------S 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~-----------------------~ 251 (344)
-..++.|.+.|+..... ..+. .........++++|.+..++.+... +.|..+ +
T Consensus 95 d~~~~~I~~~~~~g~~~-~~~~-~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d 172 (316)
T 1ijq_A 95 DSVLGTVSVADTKGVKR-KTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 172 (316)
T ss_dssp ETTTTEEEEEETTSSSE-EEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEE
T ss_pred ECCCCEEEEEeCCCCce-EEEE-ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEe
Confidence 66788999999875432 2121 1223456889999877766665532 455554 4
Q ss_pred CCCC-EEEEEeCCCcEEEEeCCCCeEEeeecc-cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 252 SDGR-IYCSGSKDGDIKIWDGVSSKCVATFSK-AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 252 ~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+++. ++++-...+.|..+|...... ..+.. .........+++. .+..+++-...+.|..++..+|+.+..+..
T Consensus 173 ~~~~~lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 173 LLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred ccCCEEEEEECCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 3333 333334456777777753322 22211 1111235778885 455666666778899999888876666643
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.011 Score=48.36 Aligned_cols=167 Identities=8% Similarity=0.137 Sum_probs=98.8
Q ss_pred EecCCcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEE---
Q psy15157 174 TLYDHIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL--- 249 (344)
Q Consensus 174 ~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~--- 249 (344)
.+.+-...+..++|+|++. ++++...++.|...|.. ++....+...+ ....-.+++.+++.++++.-.++.+.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4556667899999999766 55557778899999987 66555544322 234666777777766555433333333
Q ss_pred -----------------------------EcCCCCEEEEEeCCCcEEEEeCC---CCeEEeee-----cccCCCccEEEE
Q psy15157 250 -----------------------------YSSDGRIYCSGSKDGDIKIWDGV---SSKCVATF-----SKAHDGAEISSL 292 (344)
Q Consensus 250 -----------------------------~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~-----~~~~~~~~v~~i 292 (344)
|++.+..|+++.......+|... ....+..+ ........+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 36667666666655554555443 11111111 111112347899
Q ss_pred EEccC-CCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC-------cCceeeeeeeccCC
Q psy15157 293 TFTRN-GKYLLSSGKDSLVKLWELSSARCLIAYTGAGS-------MGQQFELTLTVDAD 343 (344)
Q Consensus 293 ~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 343 (344)
+++|. +++++.......|.++|.. |+.+..+.-..+ ..+-.-+++..++.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 99995 4555666677888999974 666666554321 23445555555543
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.02 Score=48.14 Aligned_cols=168 Identities=13% Similarity=0.096 Sum_probs=93.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
...+..+++.++|+++++..... .|..++..++.. ..+..+ ........++..+++..+++
T Consensus 71 ~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~----------------~~~~~~-~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 71 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV----------------ETLLTL-PDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE----------------EEEEEC-TTCSCEEEEEESSSSEEEEE
T ss_pred CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE----------------EEEEeC-CCccccCcccccCCCcEEEE
Confidence 35688999999999766654332 465666543211 111111 11222345555555555555
Q ss_pred EeCCCcEEEEEcCCCccccc-----e---eeeccccceEEEEEecCCCEEEEEe-CCCEEEEE-----------------
Q psy15157 197 GSKDKTVKMFDYSKSSVRKA-----H---KTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY----------------- 250 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~-----~---~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~----------------- 250 (344)
-..++.|.++|...++.... . ...........+ ++++++++++. ..+.|..|
T Consensus 134 d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~ 211 (306)
T 2p4o_A 134 DSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ 211 (306)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES
T ss_pred ECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc
Confidence 55688899998765321000 0 000111223444 77777666654 33444444
Q ss_pred --------cCCCCEEEEEeCCCcEEEEeCCCCeEEe--eecccCCCccEEEEEEc---cCCCEEEEEeCCC
Q psy15157 251 --------SSDGRIYCSGSKDGDIKIWDGVSSKCVA--TFSKAHDGAEISSLTFT---RNGKYLLSSGKDS 308 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~i~~~---~~~~~l~s~~~dg 308 (344)
+++|+++++....+.|.++|.. ++... .+... ....++++|. |+++.|+.++..+
T Consensus 212 ~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 212 TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 5567777666667889999875 55422 33321 1358999998 8888877766543
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0055 Score=54.52 Aligned_cols=158 Identities=9% Similarity=0.114 Sum_probs=84.7
Q ss_pred CceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 120 SPCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
.....++|+++ +..|..+...+.|+.+|..++ .+..+........+++++++++++++.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-------------------~v~~~~~~~~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-------------------YVDIKTTNIGQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTT-------------------EEEEECCCCSCEEEEEECTTCCEEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCC-------------------EEEEeecCCCCccEEEECCCCCEEEEc
Confidence 34678999984 334444444488999987532 233333345568899999999955554
Q ss_pred eCC---Cc-EEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy15157 198 SKD---KT-VKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 198 ~~d---g~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~ 273 (344)
... .. +...+.. +..... ...........++++|. +|.++++-..++.|+.+|..+
T Consensus 200 ~~~~~~~~gv~~~~~~-~~~~~~-~~~~~~~~P~giavd~~------------------~G~lyv~d~~~~~V~~~d~~~ 259 (433)
T 4hw6_A 200 DQSSDTNTGIYLFTRA-SGFTER-LSLCNARGAKTCAVHPQ------------------NGKIYYTRYHHAMISSYDPAT 259 (433)
T ss_dssp CCSCTTSEEEEEECGG-GTTCCE-EEEEECSSBCCCEECTT------------------TCCEEECBTTCSEEEEECTTT
T ss_pred CCCCcccceEEEEECC-CCeecc-ccccccCCCCEEEEeCC------------------CCeEEEEECCCCEEEEEECCC
Confidence 321 11 3233322 111100 01111222344566662 233333334556677777766
Q ss_pred CeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcC
Q psy15157 274 SKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELS 316 (344)
Q Consensus 274 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~ 316 (344)
+.....+........-..++|+|+|++|+.+ ...+.|+.+++.
T Consensus 260 g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 260 GTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 6542222111111223579999999965554 556889998875
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.035 Score=53.23 Aligned_cols=192 Identities=14% Similarity=0.009 Sum_probs=105.9
Q ss_pred CCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEE
Q psy15157 118 HKSPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 195 (344)
....+..++|.+. +.++++-...+.|+.++++.... .......+.........|++.+.+. +++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~--------------~~~~~~vi~~~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG--------------VSSYDTVISRDIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------CEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCC--------------CcceeEEEecCCCCcceeeeeecCCcEEE
Confidence 3456678888874 44555555567788888753100 0111223333345567889987664 566
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEEcCC--------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLYSSD-------------------- 253 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~~~~-------------------- 253 (344)
+-...+.|.+.++..... ..+. .........|+++|.+.+|+..... +.|...+.+
T Consensus 488 tD~~~~~I~v~~ldG~~~-~~l~-~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLav 565 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKR-KTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITL 565 (791)
T ss_dssp EETTTTEEEEEETTSSSE-EEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEE
T ss_pred EecCCCeEEEEeCCCCeE-EEEE-eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEE
Confidence 666778999999875432 2221 2233457889999987777666532 455554222
Q ss_pred ----CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 254 ----GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 254 ----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++++++=...+.|..+|+........+.....-....+|++. .++++++-...+.|...|..+|+.+..+..
T Consensus 566 D~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 566 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCcceEEeec
Confidence 223333333455666666433322222211111234566664 334455555678888888888876666643
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.61 E-value=0.024 Score=48.03 Aligned_cols=185 Identities=11% Similarity=0.039 Sum_probs=107.3
Q ss_pred CceEEEEECCC-CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEEEE
Q psy15157 120 SPCRAGAFSID-GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~ 197 (344)
..+..++|.+. +.++.+-...+.|..++.+... .. ...+.........+++.+. +.++++-
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~----------------~~-~~~~~~~l~~p~glavd~~~g~ly~~d 97 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE----------------SV-QNVVVSGLLSPDGLACDWLGEKLYWTD 97 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSS----------------CC-CEEEEECCSCCCEEEEETTTTEEEEEE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCC----------------ce-EEEEcCCCCCccEEEEEcCCCeEEEEE
Confidence 35778999885 4555555567889888875320 00 0111112234567888874 4566666
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEE-----------------------cC
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLY-----------------------SS 252 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~-----------------------~~ 252 (344)
...+.|.++++..... ..+. .........++++|.+.+++.+.. .+.|..+ ++
T Consensus 98 ~~~~~I~~~~~dG~~~-~~l~-~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~ 175 (318)
T 3sov_A 98 SETNRIEVSNLDGSLR-KVLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDY 175 (318)
T ss_dssp TTTTEEEEEETTSCSC-EEEE-CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEET
T ss_pred CCCCEEEEEECCCCcE-EEEE-eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEec
Confidence 6678999999865422 2221 123345678899987666666552 3455544 44
Q ss_pred CC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 253 DG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 253 ~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++ +++++=+..+.|..+|...... ..+.... .....++++. .+..+++-...+.|..++..+|+.+..+..
T Consensus 176 ~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~-~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 176 EEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGS-LPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC-EEEECSC-CSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred cCCEEEEEECCCCEEEEEcCCCCce-EEEecCC-CCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 33 3333334456677777653222 2222111 2346778775 345556666778899999988876666543
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0016 Score=61.40 Aligned_cols=175 Identities=15% Similarity=0.164 Sum_probs=97.4
Q ss_pred CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC------CCcEE
Q psy15157 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK------DKTVK 204 (344)
Q Consensus 131 ~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------dg~i~ 204 (344)
+..++.++.|+.|..+|..++............. .......++ .. ++ .++.+.. +|.|.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~---------~~~~~~~P~----v~-~~-~v~vg~~~~~~~~~g~v~ 181 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK---------PYSITGAPR----VV-KG-KVIIGNGGAEYGVRGFVS 181 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS---------SCBCCSCCE----EE-TT-EEEECCBCTTTCCBCEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC---------cceecCCCE----EE-CC-EEEEeCCCCCcCCCCEEE
Confidence 4577888889999999997765443221100000 000001111 11 33 4444432 58999
Q ss_pred EEEcCCCccccceeeeccc-----------------------------cceEEEEEecCCCEEEEEeCCCEEEEEc----
Q psy15157 205 MFDYSKSSVRKAHKTIQES-----------------------------TFVRCLSFHPCGDYMVVGTDHFVLRLYS---- 251 (344)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~~~~~~i~~~~---- 251 (344)
.+|..+++....+...... .....++++|.+..+++++.++.. |.
T Consensus 182 a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~--w~~~~~ 259 (668)
T 1kv9_A 182 AYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSP--WNREVR 259 (668)
T ss_dssp EEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEES--SCHHHH
T ss_pred EEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCc--cccCCC
Confidence 9999998876554421100 001134666666666655544321 11
Q ss_pred -C-CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCC-------ccEEEEEEccCCC---EEEEEeCCCcEEEEEcCCCe
Q psy15157 252 -S-DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG-------AEISSLTFTRNGK---YLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 252 -~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~v~~i~~~~~~~---~l~s~~~dg~i~vwd~~~~~ 319 (344)
+ .+..++ -+.|.-+|.++|+.+..+...++. .+.....+..+|+ .++.++.+|.++++|..+|+
T Consensus 260 ~~~~gd~l~----~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 260 SPGGGDNLY----LSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp STTCCCCTT----TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCCcee----eeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 0 000000 125999999999988777543211 2233333344675 68999999999999999999
Q ss_pred eEEEeec
Q psy15157 320 CLIAYTG 326 (344)
Q Consensus 320 ~~~~~~~ 326 (344)
.+..++.
T Consensus 336 ~l~~~~~ 342 (668)
T 1kv9_A 336 LISAEKF 342 (668)
T ss_dssp EEEEEES
T ss_pred Eeccccc
Confidence 9866543
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.016 Score=52.13 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=67.6
Q ss_pred ceEEEEE-------CCCCCEEEEEeCCC-------eEEEEEcCC-ccccccCCCCCCcCCCCCCceEEEecCCcCCeEEE
Q psy15157 121 PCRAGAF-------SIDGQLCATGSVDA-------SIKILDVDR-MLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185 (344)
Q Consensus 121 ~v~~~~~-------s~~~~~l~sg~~dg-------~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 185 (344)
....++| +++|+.|+.+...+ .|.+++... +... .......+..+ .....+
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~----------~~~~~~~v~~~----~~p~gi 252 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFD----------DRSDIQLIAAY----KQCNGA 252 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCS----------TTSCEEEEEEE----SCCCCE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCcee----------ecccceeeccC----CCceEE
Confidence 5899999 99999666665543 255555321 0000 00000122222 133577
Q ss_pred EEcCC-CCEEEEEeCCCcEEEEEcC-------CCcc-----------ccceeeeccccceEEEEEecCCCEEEEE-eCCC
Q psy15157 186 EFHPS-APILASGSKDKTVKMFDYS-------KSSV-----------RKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHF 245 (344)
Q Consensus 186 ~~~~~-~~~l~s~~~dg~i~iwd~~-------~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~ 245 (344)
+++|+ +.++++-..++.|..+|+. ++.. ...+...........++|+|+|++++++ +..+
T Consensus 253 avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h 332 (496)
T 3kya_A 253 TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNH 332 (496)
T ss_dssp EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred EEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCC
Confidence 88994 5566677778889999997 4443 0011112233456789999999965555 4556
Q ss_pred EEEEEcC
Q psy15157 246 VLRLYSS 252 (344)
Q Consensus 246 ~i~~~~~ 252 (344)
.|+.++.
T Consensus 333 ~I~kid~ 339 (496)
T 3kya_A 333 YFMRSDY 339 (496)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 6666543
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.016 Score=51.48 Aligned_cols=176 Identities=11% Similarity=0.076 Sum_probs=96.8
Q ss_pred CceEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEE
Q psy15157 120 SPCRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 197 (344)
.....+++++ +|.++++-..++.|+.++..++... ..+... +....-..++|+|+++ ++++-
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~---------------~~~~~~-~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT---------------EEEVMM-DTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE---------------EEEEEC-SCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE---------------EEEecc-CCCCCcccEEEeCCCCEEEEEe
Confidence 4456788998 7777766666788888887532110 001111 1112234799999998 55555
Q ss_pred eCCCcEEEEEcCC--Cccccceeeec---------------cccceEEEEE---------ecCCCEEEEEeCCCEEEEEc
Q psy15157 198 SKDKTVKMFDYSK--SSVRKAHKTIQ---------------ESTFVRCLSF---------HPCGDYMVVGTDHFVLRLYS 251 (344)
Q Consensus 198 ~~dg~i~iwd~~~--~~~~~~~~~~~---------------~~~~v~~~~~---------~~~~~~l~~~~~~~~i~~~~ 251 (344)
...+.|+.++... +.......... .-.....+++ .++|.++++-..++.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 6678899988653 22110001000 0123566888 66666666666677788787
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEEeCCCcEEEEEcC
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~~~dg~i~vwd~~ 316 (344)
++|.....++... ....+..-........-.....|+++ ++|.++++-..++.|+.+++.
T Consensus 372 ~~G~v~t~~G~g~-----~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 PEGRVTTYAGRGN-----SREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTSEEEEEECCCT-----TCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEeCCC-----CCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 7775543333211 00001000000000001247889999 677766666677888888764
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0092 Score=53.64 Aligned_cols=159 Identities=12% Similarity=0.116 Sum_probs=87.1
Q ss_pred ceEEEEECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-C---CcCCeEEEEE-------
Q psy15157 121 PCRAGAFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-D---HIEEVTCLEF------- 187 (344)
Q Consensus 121 ~v~~~~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---h~~~v~~~~~------- 187 (344)
....|+|+|. ++++++-...+.|++.|..+.. +.++. . .......++|
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-------------------v~~l~~~~~~~~~~p~~ia~~~~~~~~ 200 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-------------------LSSPLNINTIPTNRIRSIAFNKKIEGY 200 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-------------------EEEEECCTTSSCSBEEEEEECCCBTTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-------------------EEEEEccCccccCCCcEEEEeeccccc
Confidence 4678899983 4455555445678888876421 22221 1 2235889999
Q ss_pred cCCCCEEEEEeCCC-c------EEEEEcCC-Ccccc-c-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEE
Q psy15157 188 HPSAPILASGSKDK-T------VKMFDYSK-SSVRK-A-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY 257 (344)
Q Consensus 188 ~~~~~~l~s~~~dg-~------i~iwd~~~-~~~~~-~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l 257 (344)
++++..|+.+...+ . |.+.+... +.... . ............++++|++.. ++
T Consensus 201 d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~------------------LY 262 (496)
T 3kya_A 201 ADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGE------------------LY 262 (496)
T ss_dssp BCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCC------------------EE
T ss_pred CCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCe------------------EE
Confidence 99998666555543 2 56665333 12210 0 001111112344566664333 33
Q ss_pred EEEeCCCcEEEEeCC-------CCeE-----------EeeecccCCCccEEEEEEccCCCEEEE-EeCCCcEEEEEcC
Q psy15157 258 CSGSKDGDIKIWDGV-------SSKC-----------VATFSKAHDGAEISSLTFTRNGKYLLS-SGKDSLVKLWELS 316 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~-------~~~~-----------~~~~~~~~~~~~v~~i~~~~~~~~l~s-~~~dg~i~vwd~~ 316 (344)
++-..++.|..+|+. ++.. ...+...........|+|+|+|++|+. -.....|+.++..
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 355566778888876 4432 111111112234689999999996544 4567788886653
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.09 Score=50.61 Aligned_cols=187 Identities=11% Similarity=0.100 Sum_probs=109.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
...|.++...++|++|..|+.++-|.+||..++....... ... ......|.++...+++.+.+. +
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~--------~~~------~l~~~~v~~i~~d~~g~lwig-t 469 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQ--------RNS------QLVNENVYAILPDGEGNLWLG-T 469 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECT--------TTS------CCSCSCEEEEEECSSSCEEEE-E
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeec--------CCC------CcCCCeeEEEEECCCCCEEEE-e
Confidence 3568999988888856667777779999986432111000 000 023457899998888875554 4
Q ss_pred CCCcEEEEEcCCCccccceee----eccccceEEEEEecCCCEEEEEeCCCEEEE-------------------------
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKT----IQESTFVRCLSFHPCGDYMVVGTDHFVLRL------------------------- 249 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~------------------------- 249 (344)
. +-+.+||..+++....... ......|.++..+++|...+.. ..|..++
T Consensus 470 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 547 (795)
T 4a2l_A 470 L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-EEGLSVFKQEGLDIQKASILPVSNVTKLFTNC 547 (795)
T ss_dssp S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-SSCEEEEEEETTEEEECCCSCSCGGGGSCEEE
T ss_pred c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-CCceEEEeCCCCeEEEecCCCCCCCCCCeeEE
Confidence 4 4588899877543221110 1123568888888887755543 3332221
Q ss_pred --EcCCCCEEEEEeCCCcEEEEeCCCCeEEeee-cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 250 --YSSDGRIYCSGSKDGDIKIWDGVSSKCVATF-SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 250 --~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+++|.+.+ |+.. -|..||..+++...-- ..+-....|.++..+++|++.+++ . +-|..||..+++ +..|..
T Consensus 548 i~~d~~g~lWi-gT~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~~-~~~~~~ 622 (795)
T 4a2l_A 548 IYEASNGIIWV-GTRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST-N-RGISCFNPETEK-FRNFTE 622 (795)
T ss_dssp EEECTTSCEEE-EESS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE-T-TEEEEEETTTTE-EEEECG
T ss_pred EEECCCCCEEE-EeCC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc-C-CceEEEcCCCCc-EEEcCC
Confidence 134555444 4444 5788888776544311 111122458999999888865555 3 457888987765 345544
Q ss_pred C
Q psy15157 327 A 327 (344)
Q Consensus 327 ~ 327 (344)
.
T Consensus 623 ~ 623 (795)
T 4a2l_A 623 S 623 (795)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.004 Score=58.65 Aligned_cols=55 Identities=13% Similarity=0.117 Sum_probs=35.1
Q ss_pred CCCCEEEEEeCC-----------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 252 SDGRIYCSGSKD-----------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 252 ~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
++|++++.|+.+ ..+.+||..+.+....-..........+..+.|+|+.++.||.
T Consensus 465 ~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 465 PDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 578888888754 4688999887664432111111112344566789999999885
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.062 Score=46.17 Aligned_cols=175 Identities=13% Similarity=0.071 Sum_probs=95.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASG 197 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 197 (344)
.+..+|.+..+++ +|+.+. ...|+..++.. ... ..+.........++|++... ++++-
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g------------------~~~-~~~~~~~~~~~~l~~d~~~~~ly~~D 91 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFAN-RIDIRQVLPHR------------------SEY-TLLLNNLENAIALDFHHRRELVFWSD 91 (349)
T ss_dssp TTSSCEEESSSCC-EEEEEC-BSCEEEECTTS------------------CCE-EEEECSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCCcccccccCc-eeEeec-ccceEEEeCCC------------------Cee-EEeecCCCceEEEEEeccccEEEEEe
Confidence 3445566666644 343332 34577776642 111 22222334578999997655 55555
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEE-----------------------cCC
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~-----------------------~~~ 253 (344)
...+.|..+++.......... ........+++++.+..|+.+ ...+.|.+. +|.
T Consensus 92 ~~~~~I~r~~~~g~~~~~~~~--~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~ 169 (349)
T 3v64_C 92 VTLDRILRANLNGSNVEEVVS--TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPM 169 (349)
T ss_dssp TTTTEEEEEETTSCSCEEEEC--SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETT
T ss_pred ccCCceEEEecCCCCceEEEe--CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecC
Confidence 567889999987654322111 122335678888765555444 344555554 332
Q ss_pred -CCEEEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCCC
Q psy15157 254 -GRIYCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSSA 318 (344)
Q Consensus 254 -~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~~ 318 (344)
|.++++-... +.|..+++........+. ......+.++++|++..|+.+ ...+.|..+|+...
T Consensus 170 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~--~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 170 EGTIYWTDWGNTPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEESCC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCeEEEeccCCCCEEEEEeCCCCCcEEEEE--CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 3333333333 556666654332222221 112357899999866666555 45678999998654
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.14 Score=49.25 Aligned_cols=181 Identities=14% Similarity=0.157 Sum_probs=105.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEEEcCCCCEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~ 195 (344)
...|.++...++|++.+ |+.++-+..++..+... ..+ ......|.++...+++.+.+
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~-------------------~~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF-------------------QIIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE-------------------EECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE-------------------EEeccCCCCCCeEEEEEECCCCCEEE
Confidence 35688888887777555 55666688888753211 111 12345788998888776444
Q ss_pred EEeCCCcEEEEEcCCCccccceeee---ccccceEEEEEecCCCEEEEEeCCCEEEE---------E-------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTI---QESTFVRCLSFHPCGDYMVVGTDHFVLRL---------Y------------- 250 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~i~~---------~------------- 250 (344)
|+. +-|..+|..+++........ .....|.++...++|...+.....|..++ +
T Consensus 466 -gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~ 543 (781)
T 3v9f_A 466 -GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQ 543 (781)
T ss_dssp -EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEE
T ss_pred -EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEE
Confidence 455 56888998776532211100 01356889998888875554433443332 1
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCCeEEee-ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 ---SSDGRIYCSGSKDGDIKIWDGVSSKCVAT-FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 ---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+++|.+. .|+.+|.|..||..+++...- ...+-....|.++..+++|++.++ +.+| |..||..+++ +..|.
T Consensus 544 i~~d~~g~lW-i~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~-t~~G-l~~~~~~~~~-~~~~~ 618 (781)
T 3v9f_A 544 IYRSSKGQMW-LATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAS-TNTG-ISCYITSKKC-FYTYD 618 (781)
T ss_dssp EEECTTSCEE-EEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEE-CSSC-EEEEETTTTE-EEEEC
T ss_pred EEECCCCCEE-EEECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEE-cCCc-eEEEECCCCc-eEEec
Confidence 2344444 344455548888776653221 111111235888999988876554 4455 7778886654 34454
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.09 Score=50.50 Aligned_cols=185 Identities=14% Similarity=0.121 Sum_probs=107.1
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
...|.++...++|.+. .|+.++-|..|+..+....... .........|.++...+++.+.+ |+
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~---------------~~~~~~~~~v~~i~~d~~g~lWi-gt 424 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNK---------------ENRELLSNSVLCSLKDSEGNLWF-GT 424 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC--------------------CCCSBEEEEEECTTSCEEE-EE
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEcc---------------CCCCCCCcceEEEEECCCCCEEE-Ee
Confidence 3568999988877754 4555556888887543211100 00012346789998888876554 67
Q ss_pred CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------------
Q psy15157 199 KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------------- 250 (344)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------------- 250 (344)
.++-|..+|..+++.............|.++...++|. +.+|+..|. ..|
T Consensus 425 ~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~~Gl-~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 425 YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTHAGV-FVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEETTEE-EEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEECCce-EEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 66778899987654322111011235688888887765 444554443 333
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEeeec-ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+++|.+. .|+.++-+..||..+++...... ..-....|.++..+++|++.++ +.+|.|..||..+++ +..|.
T Consensus 503 d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~~-~~~~~ 575 (781)
T 3v9f_A 503 DSEGRFW-IGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNFD-YQVFQ 575 (781)
T ss_dssp CTTCCEE-EEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTCC-CEEEC
T ss_pred cCCCCEE-EEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCCc-EEEcc
Confidence 2334433 45554457778877665433211 1111246899999988885554 447766889987765 34443
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.021 Score=54.69 Aligned_cols=161 Identities=10% Similarity=0.034 Sum_probs=80.9
Q ss_pred EEEEECCCCCEEEEEeCC-----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCEEEE
Q psy15157 123 RAGAFSIDGQLCATGSVD-----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 123 ~~~~~s~~~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s 196 (344)
..++|+|||+.|+....| ..|.++++.+... .....+. ........+.|+|++++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~----------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~ 287 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS----------------EDVCLYEEHNPLFSAFMYKAADTNTLCI 287 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG----------------GCEEEEECCCTTCEEEEEECTTSSEEEE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch----------------hcEEEEecCCCceEEEEEECCCCCEEEE
Confidence 467899999887777665 2577777653210 1111221 22234568899999997765
Q ss_pred EeC---CCcEEEEEcCCCcccc--ceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy15157 197 GSK---DKTVKMFDYSKSSVRK--AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 197 ~~~---dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~ 271 (344)
.+. ...|.++|+.++.... ............++.|+. |+.|+..+... +.....|..+|+
T Consensus 288 ~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~--------------~a~~~~L~~~d~ 352 (751)
T 2xe4_A 288 GSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEG--------------GAVNHKLLIAPR 352 (751)
T ss_dssp EEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTT--------------TCTTCEEEEEET
T ss_pred EecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCC--------------CCCCcEEEEEcC
Confidence 542 3458888887652111 111111223334444432 44443322110 012235666776
Q ss_pred CCCeEEee-ecccCCCccEEEEEEccCCCEEEEEeCCCc--EEEEEc
Q psy15157 272 VSSKCVAT-FSKAHDGAEISSLTFTRNGKYLLSSGKDSL--VKLWEL 315 (344)
Q Consensus 272 ~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~--i~vwd~ 315 (344)
.++..... +........+..+.+. .+.++++...++. |+++|+
T Consensus 353 ~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 353 GQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 64211112 2212222245666665 3345566677776 555665
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.11 Score=48.11 Aligned_cols=63 Identities=13% Similarity=0.084 Sum_probs=45.0
Q ss_pred CcEEEEeCCCCeEEeeecccCCCc-------cEEEEEEc-cCC---CEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGA-------EISSLTFT-RNG---KYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~-------~v~~i~~~-~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
+.|.-+|.++|+.+..+...++.. ...-+... .+| +.++.++.+|.++++|.++|+.+..++.
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKL 351 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccc
Confidence 379999999999887776443211 11112222 467 5678889999999999999999987763
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.09 E-value=0.13 Score=45.10 Aligned_cols=141 Identities=8% Similarity=-0.040 Sum_probs=78.3
Q ss_pred CcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcc--ccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEEcCC
Q psy15157 178 HIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSV--RKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSD 253 (344)
Q Consensus 178 h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~~~~ 253 (344)
....+..++|++... ++++-...+.|+.+++..... ...............+++++.+..|+.+ ...+.|.+.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 456788999998655 555555678899999865220 0111111133456788888855555444 445666665333
Q ss_pred C-----------------------CEEEEEe-C-CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCC
Q psy15157 254 G-----------------------RIYCSGS-K-DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKD 307 (344)
Q Consensus 254 ~-----------------------~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~d 307 (344)
| ..|+... . .+.|...++........+. . .-...+.|++++++..|+.+ ...
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~-~-~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-E-NIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC-S-SCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE-C-CCCceEEEEEEeCCCEEEEEECCC
Confidence 3 2222222 1 2455555554332222221 1 11357899999877776665 456
Q ss_pred CcEEEEEcCCCee
Q psy15157 308 SLVKLWELSSARC 320 (344)
Q Consensus 308 g~i~vwd~~~~~~ 320 (344)
+.|..+|+.....
T Consensus 268 ~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 268 HSISSIDVNGGNR 280 (400)
T ss_dssp TEEEEEETTSCCC
T ss_pred CEEEEEeCCCCcc
Confidence 7899999865443
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.1 Score=45.66 Aligned_cols=114 Identities=14% Similarity=0.170 Sum_probs=70.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcccc------------ceeeec----cccceEEEEEecCCCEEEEEeCC
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK------------AHKTIQ----ESTFVRCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------------~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~ 244 (344)
.|..+..+|+|.+|+..+ +..|.|-.+..+.... .+.... ...+|..+.|||-+
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~--------- 136 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKS--------- 136 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTB---------
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEecccc---------
Confidence 577899999999998876 4689998887432111 111100 13568888888853
Q ss_pred CEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEeeeccc-------CCCccEEEEEEccCCCEEEEEe--CCCcEEE
Q psy15157 245 FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK--CVATFSKA-------HDGAEISSLTFTRNGKYLLSSG--KDSLVKL 312 (344)
Q Consensus 245 ~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~-------~~~~~v~~i~~~~~~~~l~s~~--~dg~i~v 312 (344)
..+..|++-..|+.|++||+.... +. .+... .....|.+++|..++-.|...+ +.|.|+-
T Consensus 137 -------~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 137 -------YRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp -------GGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred -------CCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 255667778888889999887521 11 22111 1113588999988665555533 5666554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.13 Score=48.04 Aligned_cols=186 Identities=12% Similarity=0.034 Sum_probs=104.3
Q ss_pred CCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 195 (344)
.-..+..++|++.+..+..+. ..+.|..++++.. ......+..-......+++.+.+. +++
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~-----------------~~~~~v~~~~~~~P~GlAvD~~~~~ly~ 100 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT-----------------ESVQNVVVSGLLSPDGLACDWLGEKLYW 100 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------CEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC-----------------CceEEEEeCCCCCcCeEEEEecCCEEEE
Confidence 344678999998666555444 4677888887521 001122233335688999998555 556
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEE-----------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLY----------------------- 250 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~----------------------- 250 (344)
+-...+.|.+.++..... ..+. .........++++|.+.+|+.... .+.|...
T Consensus 101 ~d~~~~~I~v~~~dG~~~-~~l~-~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glal 178 (619)
T 3s94_A 101 TDSETNRIEVSNLDGSLR-KVLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTL 178 (619)
T ss_dssp EETTTTEEEEEETTSCSC-EEEE-CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred EeCCCCEEEEEECCCCCE-EEEE-eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEE
Confidence 666778999999875432 2221 123344677899998776666553 2344433
Q ss_pred cCC-CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 SSD-GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 ~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+++ ++++++-...+.|..+|........... ... ....++++..+ ...++-...+.|...|..+|+....+.
T Consensus 179 d~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~-~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 179 DYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSL-PHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIH 251 (619)
T ss_dssp ETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECC
T ss_pred EccCCEEEEEeCCCCeEEEecCCCCccEEEEe-CCC-CCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEe
Confidence 332 3333333444567777765433222221 111 12356777655 445555577889999998887655544
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.14 Score=43.45 Aligned_cols=157 Identities=10% Similarity=0.056 Sum_probs=82.4
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
++...+..+++.+++.+++.+...+..+-+|-. ...+..+. ......+..+.+.+++.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g----------------G~tW~~~~--~~~~~~~~~~~~~~~g~~~~- 220 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG----------------QTAWEPHN--RTTSRRLHNMGFTPDGRLWM- 220 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTT----------------CSSCEEEE--CCSSSCEEEEEECTTSCEEE-
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC----------------CCceeECC--CCCCCccceeEECCCCCEEE-
Confidence 455678889999888888776544333333320 01122221 23456788899999887554
Q ss_pred EeCCCcEEEEEcCCCccccceeee--ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTI--QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++.+|.+++.+...++.-...... .....+.++.+.+++..++++ .+|.| ++....+
T Consensus 221 ~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g--------------------~~g~i-~~S~DgG 279 (327)
T 2xbg_A 221 IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG--------------------GAGAL-LCSQDGG 279 (327)
T ss_dssp EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE--------------------STTCE-EEESSTT
T ss_pred EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe--------------------CCCeE-EEeCCCC
Confidence 556788877643223211111111 122347778887765555433 23433 2222222
Q ss_pred eEEeeeccc-CCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 275 KCVATFSKA-HDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 275 ~~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
+.-..+... .....+.++.|.++++ +++++.+|.|.-++
T Consensus 280 ~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 280 QTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred cccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 211122111 0112467888875554 66667788776665
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.27 Score=47.19 Aligned_cols=158 Identities=9% Similarity=-0.004 Sum_probs=84.5
Q ss_pred CcCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcc--ccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEEc--
Q psy15157 178 HIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSV--RKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYS-- 251 (344)
Q Consensus 178 h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~~-- 251 (344)
....+..|+|++... ++++-...+.|+.+++..... ...............|++++.+..|+.+. ..+.|.+.+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 345678999998544 556666678899999875321 01111111233456788888776665543 455665553
Q ss_pred ---------------------CC-CCEEEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCC
Q psy15157 252 ---------------------SD-GRIYCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKD 307 (344)
Q Consensus 252 ---------------------~~-~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~d 307 (344)
|. |.++++-... +.|...++........+. . .....+.|++++.+..|+.+ ...
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-~-~l~~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-E-NIQWPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-S-SCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-C-CCCCceEEEEecCCCeEEEEeCCC
Confidence 33 2233332222 456666654333222222 1 12358899999766666655 456
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcCceeeee
Q psy15157 308 SLVKLWELSSARCLIAYTGAGSMGQQFELT 337 (344)
Q Consensus 308 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 337 (344)
+.|...++........+.........+.+.
T Consensus 580 ~~I~~~d~dG~~~~~v~~~~~~l~~P~gla 609 (791)
T 3m0c_C 580 HSISSIDVNGGNRKTILEDEKRLAHPFSLA 609 (791)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEE
T ss_pred CcEEEEecCCCceEEEecCCCccCCCCEEE
Confidence 779999986554444443333333333333
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.046 Score=47.75 Aligned_cols=123 Identities=16% Similarity=0.071 Sum_probs=80.0
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC------CcCCeEEEEEcCC---C
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD------HIEEVTCLEFHPS---A 191 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~---~ 191 (344)
.|..+..||+|++||..+ +..|.|-.+.......... .. ...-..+.+.- ...+|..+.|||- +
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~---~~---~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~d 139 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV---SI---QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRD 139 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH---HH---HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGG
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc---cc---ccccceeEEEcCCcccCCCCceeEEEeccccCCC
Confidence 678899999999999986 4579999986321111000 00 00011122221 3578999999994 4
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccc--------eeeeccccceEEEEEecCCCEEEEEe--CCCEEEEE
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKA--------HKTIQESTFVRCLSFHPCGDYMVVGT--DHFVLRLY 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~~ 250 (344)
..|++-..|+.|++||+........ +........+.+++|..++-.|++.+ ..|-|.-.
T Consensus 140 s~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 140 SCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 5899999999999999986321111 11111225688999999888888866 77877764
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.17 Score=44.02 Aligned_cols=136 Identities=13% Similarity=0.056 Sum_probs=77.4
Q ss_pred cCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEE------
Q psy15157 179 IEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY------ 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~------ 250 (344)
......++|++.+. ++++-...+.|..+++.......... ........+++++.+..|+.. ...+.|.+.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~--~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~ 192 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS--TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 192 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC--SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe--CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc
Confidence 34578999997555 55565667889999987654222111 112234567888765555444 344555554
Q ss_pred -----------------cCCCC-EEEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcE
Q psy15157 251 -----------------SSDGR-IYCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLV 310 (344)
Q Consensus 251 -----------------~~~~~-~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i 310 (344)
+|.+. ++++-... +.|..+++.......... . .....+.|+|+|++..|+.+ +..+.|
T Consensus 193 ~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~-~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 193 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-T-HLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-S-SCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-C-CCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 33333 33333333 556666654332222221 1 12347899999866666554 556789
Q ss_pred EEEEcCCC
Q psy15157 311 KLWELSSA 318 (344)
Q Consensus 311 ~vwd~~~~ 318 (344)
..+|+...
T Consensus 271 ~~~d~dG~ 278 (386)
T 3v65_B 271 ERANLDGS 278 (386)
T ss_dssp EEECTTSC
T ss_pred EEEeCCCC
Confidence 99998654
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.097 Score=43.63 Aligned_cols=172 Identities=13% Similarity=0.136 Sum_probs=88.1
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC----
Q psy15157 130 DGQLCATGSVD-----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD---- 200 (344)
Q Consensus 130 ~~~~l~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---- 200 (344)
++.+++.|+.+ ..+.+||..+... ..+..+..+.........+.. ++.+++.|+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~-------------~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 126 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADED-------------GVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRR 126 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTT-------------CCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCB
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCC-------------CeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcc
Confidence 57788888765 3588888764210 001112111111111222222 56677777654
Q ss_pred -CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-----CEEEEEc-----------------------
Q psy15157 201 -KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-----FVLRLYS----------------------- 251 (344)
Q Consensus 201 -g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~~~----------------------- 251 (344)
..+.+||..+.+...............++.+ ++..++.|+.+ ..+..|+
T Consensus 127 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 204 (301)
T 2vpj_A 127 HTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL 204 (301)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred cceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE
Confidence 3588899877654332211111111122222 56666666543 2344442
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCee
Q psy15157 252 SDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSARC 320 (344)
Q Consensus 252 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~ 320 (344)
.++.+++.|+.+ ..+.+||..+.+....-..........++.+ +++.++.|+.+ ..|.+||+.+.+-
T Consensus 205 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 205 LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 245667777664 4689999988764432211111111223333 67777888765 3578999987654
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.18 Score=43.30 Aligned_cols=107 Identities=18% Similarity=0.122 Sum_probs=61.4
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEEEcCC-
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLEFHPS- 190 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~- 190 (344)
+...-...+.++|.|+|+++++ ..+|.|++++ .. .. ..+..+ .........|+|+|+
T Consensus 26 va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g-~~----------------~~~~~~~v~~~g~~~p~gia~~pdf 86 (352)
T 2ism_A 26 VVGGLEVPWALAFLPDGGMLIA-ERPGRIRLFR-EG-RL----------------STYAELSVYHRGESGLLGLALHPRF 86 (352)
T ss_dssp EECCCSCEEEEEECTTSCEEEE-ETTTEEEEEE-TT-EE----------------EEEEECCCCCSTTCSEEEEEECTTT
T ss_pred EECCCCCceEEEEcCCCeEEEE-eCCCeEEEEE-CC-Cc----------------cEeecceEeecCCCCceeEEECCCC
Confidence 3333456789999999996655 5669999998 31 10 111111 122356789999998
Q ss_pred --CC-EEEEEeCC-----CcEEEEEcCCCccc---cceeeec----cccceEEEEEecCCCEEEE
Q psy15157 191 --AP-ILASGSKD-----KTVKMFDYSKSSVR---KAHKTIQ----ESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 191 --~~-~l~s~~~d-----g~i~iwd~~~~~~~---~~~~~~~----~~~~v~~~~~~~~~~~l~~ 240 (344)
+. ++++-..+ +.|..|+....... ..+.... .......++|.|+|.++++
T Consensus 87 ~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 87 PQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred CCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 44 44444432 67888887643211 1111111 1123467999999965554
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0076 Score=57.14 Aligned_cols=166 Identities=9% Similarity=-0.019 Sum_probs=89.1
Q ss_pred eEEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEEeC
Q psy15157 122 CRAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASGSK 199 (344)
Q Consensus 122 v~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 199 (344)
...|++.+ .++++++-...+.|.+++++.. .....+.........+++.|.+. ++++-..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~------------------~~~~l~~~~~~~P~giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGV------------------KRKTLFREQGSKPRAIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSC------------------CEEEECCCSSCCCCCEECCSSSSCCEECCCS
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCC------------------ceEEEEeCCCCCcceEEEccCCCcEEEcccC
Confidence 45677774 4455555455677888887521 11111222223456788888654 4444322
Q ss_pred C-CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 200 D-KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 200 d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
. +.|..+++..... ..+. .........|+|+|++..|+++ -...+.|..+|+.......
T Consensus 517 ~~~~I~~~~~dG~~~-~~l~-~~~l~~PnGlavd~~~~~LY~a------------------D~~~~~I~~~d~dG~~~~~ 576 (699)
T 1n7d_A 517 TPAKIKKGGLNGVDI-YSLV-TENIQWPNGITLDLLSGRLYWV------------------DSKLHSISSIDVNGGNRKT 576 (699)
T ss_dssp SSCCEEBCCSSSCCC-CEES-CSSCSSCCCEEECTTTCCEEEE------------------ETTTTEEEEECSSSSCCEE
T ss_pred CCCeEEEEeCCCCCe-eEEE-eCCCCCccEEEEeccCCEEEEE------------------ecCCCeEEEEccCCCceEE
Confidence 2 6788877754321 1111 1122345668898876555543 3344556666664322221
Q ss_pred eecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 279 TFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 279 ~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+..........+|++..+ .++++....+.|..++..+|+.+..+..
T Consensus 577 ~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 577 ILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp ECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred EEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 1111111112345666543 4555666778999999989988877754
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.22 Score=41.56 Aligned_cols=169 Identities=10% Similarity=0.124 Sum_probs=87.6
Q ss_pred CCCEEEEEeCC----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC-----
Q psy15157 130 DGQLCATGSVD----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD----- 200 (344)
Q Consensus 130 ~~~~l~sg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----- 200 (344)
++.+++.|+.+ ..+.+||..+.. +..+..+.........+.+ ++.+++.|+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 116 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDS----------------WYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSA 116 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTE----------------EEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCe----------------EEECCCCCccccceeEEEE--CCEEEEECCCCCCCcE
Confidence 57788888765 567788876421 1122222111111222222 56677777765
Q ss_pred -CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC---------CCEEEEEc-------------------
Q psy15157 201 -KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD---------HFVLRLYS------------------- 251 (344)
Q Consensus 201 -g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~i~~~~------------------- 251 (344)
..+.+||..+.+...............++.+ ++..++.|+. ...+..|+
T Consensus 117 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 194 (306)
T 3ii7_A 117 LYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNH 194 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred eeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcc
Confidence 4588999887654322111111111122222 5555555542 22344441
Q ss_pred ----CCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCC
Q psy15157 252 ----SDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSS 317 (344)
Q Consensus 252 ----~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~ 317 (344)
.++++++.|+.+ ..+.+||..+.+-...-..........++.+ ++++++.|+.+ ..+.+||+.+
T Consensus 195 ~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 195 GLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred eEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 245666666654 3588899887754332111111112233333 67788888754 4689999988
Q ss_pred Cee
Q psy15157 318 ARC 320 (344)
Q Consensus 318 ~~~ 320 (344)
.+-
T Consensus 273 ~~W 275 (306)
T 3ii7_A 273 DKW 275 (306)
T ss_dssp TEE
T ss_pred CeE
Confidence 754
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.051 Score=50.16 Aligned_cols=64 Identities=13% Similarity=0.039 Sum_probs=44.2
Q ss_pred CcEEEEeCCCCeEEeeecccCCC-------ccEEEEEEccCCC---EEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDG-------AEISSLTFTRNGK---YLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~-------~~v~~i~~~~~~~---~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+.|..+|.++++.+..+...++. ....-+....+|+ .++.++.+|.++++|..+|+.+..++..
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence 36899999999988776532210 1111223334774 6778899999999999999998887643
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.35 Score=43.12 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=62.6
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec------CCcCCeEE
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY------DHIEEVTC 184 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~ 184 (344)
+...+...-...+.|+|.|+|+++++-...+.|++++..++.. ..+..+. ...+....
T Consensus 18 ~~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~----------------~~~~~~~~~~~~~~g~~Gllg 81 (454)
T 1cru_A 18 DKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSV----------------KTVFQVPEIVNDADGQNGLLG 81 (454)
T ss_dssp CEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----------------EEEEECTTCCCCTTSSCSEEE
T ss_pred EEEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE----------------eEEecCCccccccCCCCceeE
Confidence 3333433345678999999999887765445788887532211 1111221 12456789
Q ss_pred EEEcCC----CCEEEEEeC------------CCcEEEEEcCCCc--c---ccceeee--ccccceEEEEEecCCCEEEEE
Q psy15157 185 LEFHPS----APILASGSK------------DKTVKMFDYSKSS--V---RKAHKTI--QESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 185 ~~~~~~----~~~l~s~~~------------dg~i~iwd~~~~~--~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 241 (344)
|+|+|+ +.+.++-+. ...|.-|++.... . ...+... ........|.|.|+|.+.++.
T Consensus 82 ia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 82 FAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI 161 (454)
T ss_dssp EEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE
T ss_pred EEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEE
Confidence 999995 444444432 2345556554321 1 1111111 112346788999988765553
Q ss_pred e
Q psy15157 242 T 242 (344)
Q Consensus 242 ~ 242 (344)
+
T Consensus 162 G 162 (454)
T 1cru_A 162 G 162 (454)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.29 Score=42.06 Aligned_cols=211 Identities=14% Similarity=0.095 Sum_probs=110.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe---cCCcCCeEEEEEcC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL---YDHIEEVTCLEFHP 189 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~ 189 (344)
..+..--...+.++|.|+|+++++ ..+|.|++++.. +. ..+..+ .........|+++|
T Consensus 22 ~~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~-G~-----------------~~~~~~~v~~~g~~g~~gia~~p 82 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLGGGRYLVT-ERPGRLVLISPS-GK-----------------KLVASFDVANVGEAGLLGLALHP 82 (354)
T ss_dssp EEEECSCSCEEEEEEEETTEEEEE-ETTTEEEEECSS-CE-----------------EEEEECCCCCSTTCSEEEEEECT
T ss_pred EEEeCCCCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC-Cc-----------------eEeeccceeecCCCceeeEEeCC
Confidence 333333456889999999986555 566999988632 11 111111 11234678999999
Q ss_pred C----CCEEEEEeC---C----CcEEEEEcCCC--cc---cccee-ee-ccccceEEEEEecCCCEEEEEeC--------
Q psy15157 190 S----APILASGSK---D----KTVKMFDYSKS--SV---RKAHK-TI-QESTFVRCLSFHPCGDYMVVGTD-------- 243 (344)
Q Consensus 190 ~----~~~l~s~~~---d----g~i~iwd~~~~--~~---~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~-------- 243 (344)
+ +.++++-+. + +.|..|+.... .. ...+. .. ........+.|.|+|.++++.+.
T Consensus 83 df~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~ 162 (354)
T 3a9g_A 83 EFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQ 162 (354)
T ss_dssp TTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGT
T ss_pred CCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCcccc
Confidence 7 444444332 3 56777776653 11 11111 11 11123466899999976555321
Q ss_pred -----CCEEEEEcCCCC-----------EEEEEeC----------CCcEEEEeCCCC--eEEeeecc-------------
Q psy15157 244 -----HFVLRLYSSDGR-----------IYCSGSK----------DGDIKIWDGVSS--KCVATFSK------------- 282 (344)
Q Consensus 244 -----~~~i~~~~~~~~-----------~l~~~~~----------dg~i~iwd~~~~--~~~~~~~~------------- 282 (344)
.+.|.-++++|. .++.|-. +|.+.+=|.... ..+..+..
T Consensus 163 d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~ 242 (354)
T 3a9g_A 163 DLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKA 242 (354)
T ss_dssp CTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCC
T ss_pred CCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCC
Confidence 256666666664 3333222 455554443221 11111100
Q ss_pred -----------c-CCCccEEEEEE-------ccCCCEEEEEeCCCcEEEEEcCCC-eeE--EEeecCCCcCceeeeeeec
Q psy15157 283 -----------A-HDGAEISSLTF-------TRNGKYLLSSGKDSLVKLWELSSA-RCL--IAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 283 -----------~-~~~~~v~~i~~-------~~~~~~l~s~~~dg~i~vwd~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 340 (344)
. +.......++| ..+|+++++.-..+.|...++... +.. ..+.. +...+...+.+.+
T Consensus 243 ~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~~~rp~~v~~~p 321 (354)
T 3a9g_A 243 GRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK-NVFGRLRDVVIDD 321 (354)
T ss_dssp CCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT-TTSCCEEEEEECT
T ss_pred CCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc-CCCCCeeEEEECC
Confidence 0 11124678888 356777777667778888888753 322 22321 1234555666666
Q ss_pred cCC
Q psy15157 341 DAD 343 (344)
Q Consensus 341 ~~~ 343 (344)
|+.
T Consensus 322 DG~ 324 (354)
T 3a9g_A 322 DGG 324 (354)
T ss_dssp TSC
T ss_pred CCc
Confidence 653
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.27 Score=41.62 Aligned_cols=124 Identities=15% Similarity=0.216 Sum_probs=64.9
Q ss_pred CCcCCeEEEEEcCCCCEEEEEeCCCcEEE-EEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 177 DHIEEVTCLEFHPSAPILASGSKDKTVKM-FDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 177 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
.+...+..+.+.+++.+++.+. +|.+.. +|-. +..-.... ......+..+.+.+++..+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~g-G~tW~~~~-~~~~~~~~~~~~~~~g~~~~~--------------- 221 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPG-QTAWEPHN-RTTSRRLHNMGFTPDGRLWMI--------------- 221 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEET-TSSEEEEECTT-CSSCEEEE-CCSSSCEEEEEECTTSCEEEE---------------
T ss_pred CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCC-CCceeECC-CCCCCccceeEECCCCCEEEE---------------
Confidence 4456788999999888776654 454443 3321 22111121 123445777778776654432
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeeccc--CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKA--HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
+.+|.+++.+...++.-..+... .....+.++.+.+++..++++. +|.| ++....|+.-..+.
T Consensus 222 -----~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 222 -----VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDV 286 (327)
T ss_dssp -----ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECG
T ss_pred -----eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcC
Confidence 33444544432222222222111 1112488899998887666654 6766 44555555444443
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=96.60 E-value=0.27 Score=41.52 Aligned_cols=135 Identities=13% Similarity=0.059 Sum_probs=76.3
Q ss_pred CeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEEcCCC----
Q psy15157 181 EVTCLEFHPSA-PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLYSSDG---- 254 (344)
Q Consensus 181 ~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~~~~~---- 254 (344)
....++|++.+ .++++-...+.|..+++.......... .........+++++.+..|+.+ ...+.|.+++++|
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~-~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE-EECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE-cCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 46789999854 455666667889999987653211111 1122345678888755555444 3455666653333
Q ss_pred -------------------CEEEEEe--CCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEE
Q psy15157 255 -------------------RIYCSGS--KDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKL 312 (344)
Q Consensus 255 -------------------~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~v 312 (344)
..++... ..+.|..+++..... ..+... .-...+.+++++++..|+.+ +..+.|..
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~-~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINS-EIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEEC-CCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 2222222 235566665542221 122111 11347899999966666554 56778999
Q ss_pred EEcCCC
Q psy15157 313 WELSSA 318 (344)
Q Consensus 313 wd~~~~ 318 (344)
+|+...
T Consensus 193 ~d~dG~ 198 (318)
T 3sov_A 193 SNLDGT 198 (318)
T ss_dssp EETTSC
T ss_pred EcCCCC
Confidence 998643
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.11 Score=43.28 Aligned_cols=56 Identities=11% Similarity=0.192 Sum_probs=32.4
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCCeeE
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-----LVKLWELSSARCL 321 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~ 321 (344)
..+.+||..+.+....-...........+.+ +++.++.|+.++ .+.+||+.+.+-.
T Consensus 220 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 220 KSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 4688999887754432211111111122222 677778887654 4899999887643
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.011 Score=56.16 Aligned_cols=164 Identities=12% Similarity=-0.003 Sum_probs=85.2
Q ss_pred CceEEEEECCCCCEEEEE-eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEEEE
Q psy15157 120 SPCRAGAFSIDGQLCATG-SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~ 197 (344)
..+..++|++.+..|+.+ ...+.|+.+++...... ......+.........|++.+. +.++++-
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~--------------~~~~~~i~~~~~~P~glavD~~~g~LY~tD 471 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV--------------SSYDTVISRDIQAPDGLAVDWIHSNIYWTD 471 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC---------------CCCCCBCCSCC--CCCEECCCSSSBCEECC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCC--------------cceEEEEeCCCCCcceEEEEeeCCcEEEEe
Confidence 456788998866555544 45578888887631000 0000011111123456777754 4455655
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCV 277 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 277 (344)
...+.|.++++........+. ........++++|.+.+|+.+.. +..+.|..+++.....
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~--~~~~~P~giavDp~~g~ly~td~-----------------~~~~~I~~~~~dG~~~- 531 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFR--EQGSKPRAIVVDPVHGFMYWTDW-----------------GTPAKIKKGGLNGVDI- 531 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECC--CSSCCCCCEECCSSSSCCEECCC-----------------SSSCCEEBCCSSSCCC-
T ss_pred ccCCeEEEEecCCCceEEEEe--CCCCCcceEEEccCCCcEEEccc-----------------CCCCeEEEEeCCCCCe-
Confidence 567889999987543221111 11233456778876554443221 1125566666543221
Q ss_pred eeecccCCCccEEEEEEccCCCEE-EEEeCCCcEEEEEcCCC
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYL-LSSGKDSLVKLWELSSA 318 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~ 318 (344)
..+... .....+.|+|+|++..| ++-+..+.|.++++...
T Consensus 532 ~~l~~~-~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 532 YSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CEESCS-SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred eEEEeC-CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 111111 11246789999875544 44456678999998643
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.33 Score=40.84 Aligned_cols=136 Identities=9% Similarity=-0.020 Sum_probs=75.9
Q ss_pred cCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCC---ccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEE---
Q psy15157 179 IEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKS---SVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY--- 250 (344)
Q Consensus 179 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~--- 250 (344)
......++|++.+. ++++-..++.|..+++... ...... ..........+++++.+..|+.+ ...+.|.++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~-~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE-ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE-EeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 45678999998655 5566666789999998761 111111 11122345678888765555544 445555555
Q ss_pred --------------------cCCCCE-EEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEE-eCC
Q psy15157 251 --------------------SSDGRI-YCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSS-GKD 307 (344)
Q Consensus 251 --------------------~~~~~~-l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~d 307 (344)
+|.+.. +++.... +.|..+++.... ...+... .....+.+++++++..|+.+ +..
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTE-NIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECS-SCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEEC-CCCCceEEEEeccCCEEEEEECCC
Confidence 333333 3332222 566666654322 2222111 12357899999877766555 456
Q ss_pred CcEEEEEcCC
Q psy15157 308 SLVKLWELSS 317 (344)
Q Consensus 308 g~i~vwd~~~ 317 (344)
+.|..+|+..
T Consensus 186 ~~I~~~d~dg 195 (316)
T 1ijq_A 186 HSISSIDVNG 195 (316)
T ss_dssp TEEEEEETTS
T ss_pred CeEEEEecCC
Confidence 7899999964
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.22 Score=46.09 Aligned_cols=64 Identities=9% Similarity=0.108 Sum_probs=46.3
Q ss_pred CcEEEEeCCCCeEEeeecccCCC--------ccEEEEEEc-cCCC---EEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDG--------AEISSLTFT-RNGK---YLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~--------~~v~~i~~~-~~~~---~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+.|.-+|..+|+.+-.+...++. .++. +... .+|+ .++.++.+|.++++|..+|+.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~ 366 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVD 366 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccccc
Confidence 67999999999988776533221 1121 2222 4674 78889999999999999999998877643
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.65 Score=43.30 Aligned_cols=184 Identities=8% Similarity=-0.005 Sum_probs=108.3
Q ss_pred CCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEE
Q psy15157 119 KSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 196 (344)
-..+..++|++.+. ++.+-..++.|..++++.. .....+..-......+++.+.+. ++++
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~------------------~~~~v~~~g~~~P~GlAvD~~~~~LY~t 97 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGS------------------ALEHVVEFGLDYPEGMAVDWLGKNLYWA 97 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------SCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCC------------------CcEEEEeCCCCCcceEEEEeCCCEEEEE
Confidence 34678999998555 4555556788988887531 11112222224566888887554 5566
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEE----------------------cC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLY----------------------SS 252 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~----------------------~~ 252 (344)
-...+.|.+.++..... ..+. .........++++|...+|+.... .+.|... ++
T Consensus 98 D~~~~~I~v~~~dG~~~-~~l~-~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~ 175 (628)
T 4a0p_A 98 DTGTNRIEVSKLDGQHR-QVLV-WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDY 175 (628)
T ss_dssp ETTTTEEEEEETTSTTC-EEEE-CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEET
T ss_pred ECCCCEEEEEecCCCcE-EEEE-eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEcc
Confidence 56678899999865432 2221 123345688999997667766652 3444443 34
Q ss_pred CC-CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 253 DG-RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 253 ~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++ +++++-...+.|..+|+..... ..+... . ....++++.. +..+++-...+.|...|..+|+....+..
T Consensus 176 ~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~-l-~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 176 AKRRLYWTDLDTNLIESSNMLGLNR-EVIADD-L-PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQG 246 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC-EEEEEC-C-SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred ccCEEEEEECCCCEEEEEcCCCCce-EEeecc-C-CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEec
Confidence 33 3333434456777777754332 222211 1 2356787764 45555555688899999888876655543
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.42 Score=40.98 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=60.2
Q ss_pred ceeEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
+...+...-...+.|+|.|+|+ +++ +...|.|++++.+.... .... . .. ............++++|
T Consensus 9 ~~~~va~~l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~-~~~~------~---~~--~v~~~g~~g~~gia~~p 75 (353)
T 2g8s_A 9 NVEVLQDKLDHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLS-APLS------G---VP--DVWAHGQGGLLDVVLAP 75 (353)
T ss_dssp EEEEEEEEESSEEEEEECSTTCCEEE-EETTTEEEEEETTTEEC-CCCB------S---CC--CCCCSTTCSEEEEEECT
T ss_pred EEEEEECCCCCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCcee-eEec------C---Cc--ccccCCCCCceeEEECC
Confidence 3333333345678999999999 555 45679999998542110 0000 0 00 01112234568999999
Q ss_pred C----CCEEEEEeC-------CCcEEEEEcCCCc--c--ccc-eeeec----cccceEEEEEecCCCEEEE
Q psy15157 190 S----APILASGSK-------DKTVKMFDYSKSS--V--RKA-HKTIQ----ESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 190 ~----~~~l~s~~~-------dg~i~iwd~~~~~--~--~~~-~~~~~----~~~~v~~~~~~~~~~~l~~ 240 (344)
+ +.++++-+. ...|..|++.... . ... +.... .......+.|.|+|.++++
T Consensus 76 df~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 146 (353)
T 2g8s_A 76 DFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIA 146 (353)
T ss_dssp THHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEE
T ss_pred CCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEE
Confidence 5 444444332 2356666664321 1 111 11111 1122456999999954444
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.53 Score=40.34 Aligned_cols=140 Identities=11% Similarity=0.142 Sum_probs=78.7
Q ss_pred EEecCCcCCeEEEEEcCCCCEEEEEe------------CCCcEEEEEcCCCcc-ccceeeec-----cccceEEEEEec-
Q psy15157 173 RTLYDHIEEVTCLEFHPSAPILASGS------------KDKTVKMFDYSKSSV-RKAHKTIQ-----ESTFVRCLSFHP- 233 (344)
Q Consensus 173 ~~~~~h~~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~-~~~~~~~~-----~~~~v~~~~~~~- 233 (344)
..+.+-.....++...|+|..+++++ .+|.|.++|..+... ...+.... .......+.+.+
T Consensus 43 ~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d 122 (355)
T 3sre_A 43 NLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFID 122 (355)
T ss_dssp EECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEEC
T ss_pred EEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEEC
Confidence 33444233455777888876666552 689999999874321 12222221 122455566655
Q ss_pred -CCC-EEEEEeC---CCEEEEE----------------------------cCCCCEEEEEe-----------------CC
Q psy15157 234 -CGD-YMVVGTD---HFVLRLY----------------------------SSDGRIYCSGS-----------------KD 263 (344)
Q Consensus 234 -~~~-~l~~~~~---~~~i~~~----------------------------~~~~~~l~~~~-----------------~d 263 (344)
++. +|+++.. +..+.+| +++|.++++.. ..
T Consensus 123 ~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 123 DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCc
Confidence 343 4555432 3455554 55676666543 12
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSS 317 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~ 317 (344)
|.|.-+|.. +...... .- ...+.++|+||++.|+.+. ..+.|+.|++..
T Consensus 203 g~vyr~d~~--~~~~~~~-~l--~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 203 SFVTYYSPN--DVRVVAE-GF--DFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECTT--CCEEEEE-EE--SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cEEEEEECC--eEEEeec-CC--cccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 445555543 2221121 11 2478999999998877664 578899999864
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.27 Score=40.87 Aligned_cols=55 Identities=7% Similarity=0.153 Sum_probs=31.4
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCee
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSARC 320 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~ 320 (344)
..+.+||..+.+....-...........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 4588999887754432111111111222333 57777777764 3689999987654
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.31 Score=41.61 Aligned_cols=67 Identities=12% Similarity=0.100 Sum_probs=43.3
Q ss_pred EecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceee----eccccceEEEEEecC---CCEEEE
Q psy15157 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT----IQESTFVRCLSFHPC---GDYMVV 240 (344)
Q Consensus 174 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~ 240 (344)
.+...-..-+.|+|.|++.++++--..|.|++++..++........ .........|+++|+ +.+|++
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEE
Confidence 3444455678999999999877765589999998655543211111 123456788999995 445544
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.29 Score=40.88 Aligned_cols=56 Identities=11% Similarity=0.180 Sum_probs=32.3
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCeeE
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSARCL 321 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~ 321 (344)
..+.+||..+.+....-...........+.+ ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 231 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 231 NSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred ceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 5689999888765432211111111222233 67777887754 45889999887643
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.85 Score=39.07 Aligned_cols=171 Identities=11% Similarity=0.093 Sum_probs=94.2
Q ss_pred CceEEEEECCCCCEEEEE------------eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE----ecCCcCCeE
Q psy15157 120 SPCRAGAFSIDGQLCATG------------SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT----LYDHIEEVT 183 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~ 183 (344)
...-+++..++|..++++ ..+|.|.++|.++... ....+.. +........
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~--------------~~~~l~~~g~~~~~~~f~Ph 115 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP--------------AVSELEIIGNTLDISSFNPH 115 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSC--------------CEEECEEECSSCCGGGCCEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCC--------------ceEEEEccCCCCCcCceeee
Confidence 355667778877655554 2689999999863100 0001111 111233556
Q ss_pred EEEEcC--CCC-EEEEEe-C--CCcEEEEEcCCCccc-cceeeec--cccceEEEEEecCCCEEEEEe------------
Q psy15157 184 CLEFHP--SAP-ILASGS-K--DKTVKMFDYSKSSVR-KAHKTIQ--ESTFVRCLSFHPCGDYMVVGT------------ 242 (344)
Q Consensus 184 ~~~~~~--~~~-~l~s~~-~--dg~i~iwd~~~~~~~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~~------------ 242 (344)
.+.+.+ ++. .|+.+. . +.+|.+|++...... ....... .-...+.+.+.++|.+.++..
T Consensus 116 Gi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e 195 (355)
T 3sre_A 116 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWE 195 (355)
T ss_dssp EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHH
T ss_pred eeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccch
Confidence 666655 344 344442 2 467888887654221 1111111 223567888888887665543
Q ss_pred -----CCCEEEE--------------------EcCCCCEEEEEe-CCCcEEEEeCCC-CeE--EeeecccCCCccEEEEE
Q psy15157 243 -----DHFVLRL--------------------YSSDGRIYCSGS-KDGDIKIWDGVS-SKC--VATFSKAHDGAEISSLT 293 (344)
Q Consensus 243 -----~~~~i~~--------------------~~~~~~~l~~~~-~dg~i~iwd~~~-~~~--~~~~~~~~~~~~v~~i~ 293 (344)
..+.+.. |+|+++.++.+. ..+.|..|++.. ++. ...+. . ....-.++
T Consensus 196 ~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~--~g~PDGi~ 272 (355)
T 3sre_A 196 MHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-F--DTLVDNIS 272 (355)
T ss_dssp HHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-C--SSEEEEEE
T ss_pred hhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-C--CCCCceEE
Confidence 1123322 388987766554 568899999863 322 12231 1 24578899
Q ss_pred Ecc-CCCEEEEEeCC
Q psy15157 294 FTR-NGKYLLSSGKD 307 (344)
Q Consensus 294 ~~~-~~~~l~s~~~d 307 (344)
+++ +|++.+++..+
T Consensus 273 vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 273 VDPVTGDLWVGCHPN 287 (355)
T ss_dssp ECTTTCCEEEEEESC
T ss_pred EeCCCCcEEEEecCC
Confidence 999 59987766533
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.72 Score=38.20 Aligned_cols=128 Identities=17% Similarity=0.248 Sum_probs=68.5
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCc---cccceeeeccccceEEEEEecCCCEEEEEeCC-----CEEEEEc-----
Q psy15157 190 SAPILASGSKD-----KTVKMFDYSKSS---VRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-----FVLRLYS----- 251 (344)
Q Consensus 190 ~~~~l~s~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~i~~~~----- 251 (344)
++.+++.|+.+ ..+.+||..+.+ ...............++.+ ++..++.|+.+ ..+..|+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 46677777765 468899988765 3222111111111222222 55666666533 2344442
Q ss_pred ------------------CCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-
Q psy15157 252 ------------------SDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD- 307 (344)
Q Consensus 252 ------------------~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d- 307 (344)
.++++++.|+.+ ..+.+||..+.+....-..........++.+ ++++++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 217 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCC
Confidence 245666677654 4588899887754432111111111222333 56777777764
Q ss_pred ----CcEEEEEcCCCeeE
Q psy15157 308 ----SLVKLWELSSARCL 321 (344)
Q Consensus 308 ----g~i~vwd~~~~~~~ 321 (344)
..+.+||+.+.+-.
T Consensus 218 ~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp SSBCCCEEEEETTTTEEE
T ss_pred CcccceEEEEeCCCCcEE
Confidence 46899999877543
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.65 Score=38.62 Aligned_cols=127 Identities=12% Similarity=0.214 Sum_probs=66.9
Q ss_pred CCCEEEEEeCC----CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC------CEEEEEc--------
Q psy15157 190 SAPILASGSKD----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH------FVLRLYS-------- 251 (344)
Q Consensus 190 ~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~i~~~~-------- 251 (344)
++.+++.|+.+ ..+.+||..+.+...............++.+ ++..++.|+.+ ..+..|+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 55677777755 6688899887654322211111111222222 55666666543 2344442
Q ss_pred ---------------CCCCEEEEEeC---------CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 252 ---------------SDGRIYCSGSK---------DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 252 ---------------~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
.++++++.|+. -..+.+||..+.+....-........-..+.+ ++++++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCC
Confidence 24556666653 34588899887754332111111111222223 66777777654
Q ss_pred -----CcEEEEEcCCCee
Q psy15157 308 -----SLVKLWELSSARC 320 (344)
Q Consensus 308 -----g~i~vwd~~~~~~ 320 (344)
..+.+||+.+.+-
T Consensus 211 ~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp TTEEBCCEEEEETTTTEE
T ss_pred CCCCCceEEEeeCCCCcE
Confidence 4588999987643
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.58 Score=36.99 Aligned_cols=67 Identities=15% Similarity=0.072 Sum_probs=41.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccce---eeec--cccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAH---KTIQ--ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 180 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
..+.+++|+|++.+.+. .+|.+.-.+..+.....-+ .... .-..-.++.|+|+|.+.++ .|+.|.-+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEe
Confidence 36779999999986666 6787666665442211100 1110 0111367899999998888 44777655
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.13 Score=40.61 Aligned_cols=111 Identities=16% Similarity=0.086 Sum_probs=63.0
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC
Q psy15157 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 199 (344)
..+++++|+|+|.+.+. .+|.+.-.+..+....... .....+-. .+-.. ..++.|.|++.+.++ .
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~---------~s~t~IG~-~Gw~~-F~a~~fD~~G~LYav--~ 105 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWM---------GRAKKIGN-GGWNQ-FQFLFFDPNGYLYAV--S 105 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH---------HHCEEEEC-SCGGG-CSEEEECTTSCEEEE--E
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccc---------ccccEecc-ccccc-ceEEEECCCCCEEEe--C
Confidence 47889999999997777 6776554443221000000 00000100 01112 468899999988877 5
Q ss_pred CCcEEEEEcCCCcccc---ceeeec--cccceEEEEEecCCCEEEEEeCCCEE
Q psy15157 200 DKTVKMFDYSKSSVRK---AHKTIQ--ESTFVRCLSFHPCGDYMVVGTDHFVL 247 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~---~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~i 247 (344)
||.|+-++--+..... .-.... .-..+..|.+.|+|.+.++. ++.+
T Consensus 106 dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 106 KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 6999888753321111 101111 12457899999999988887 5554
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.3 Score=40.80 Aligned_cols=55 Identities=5% Similarity=0.033 Sum_probs=31.7
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCee
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSARC 320 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~ 320 (344)
..+.+||..+.+....-........-.++.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 4688899887754432111111111223333 67777777764 5689999987654
|
| >2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A | Back alignment and structure |
|---|
Probab=95.41 E-value=0.026 Score=37.16 Aligned_cols=53 Identities=17% Similarity=0.218 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCC-----CCCCchHHHHHHHhhhccCcc
Q psy15157 17 QEALYRLIISQLYYDGHHPMAITLQSSCNVVE-----PCPPSDRLSQLVHIGLAHEPD 69 (344)
Q Consensus 17 ~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~-----~~~p~~~l~~l~~~~~~~~~~ 69 (344)
..++..+++++|...|+..+|-+++.|..... ...|+..|..+++|++.+..-
T Consensus 5 sdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~~~~~~VppgaLVsllQKGL~Y~~~ 62 (90)
T 2xtc_A 5 SDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEA 62 (90)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSCCCGGGSCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCccccccccCCcchHHHHHHHHHHHHHH
Confidence 46789999999999999999999999855422 235788999999999987654
|
| >1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.015 Score=38.02 Aligned_cols=56 Identities=13% Similarity=0.098 Sum_probs=42.7
Q ss_pred HHhHHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCCCCCchHHHHHHHhhhccCcc
Q psy15157 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHEPD 69 (344)
Q Consensus 14 ~~~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~~~ 69 (344)
-+|+++|+..|+++|...|+..++.++..+++...+.....+...++++.|....+
T Consensus 7 ~rQ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~~~~~ky~gLLEKKWTSViR 62 (88)
T 1uuj_A 7 QRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 62 (88)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHHHHTTHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCchhhhhhhhhhhhhHHHHHH
Confidence 58899999999999999999999999999987544322223456777777665444
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.31 E-value=1.1 Score=37.49 Aligned_cols=130 Identities=13% Similarity=0.117 Sum_probs=68.7
Q ss_pred CCCEEEEEeCC--------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-C-----CEEEEE-----
Q psy15157 190 SAPILASGSKD--------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-H-----FVLRLY----- 250 (344)
Q Consensus 190 ~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-----~~i~~~----- 250 (344)
++.+++.|+.+ ..+.+||..+.+...............++. -+++.++.|+. + ..+..|
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 55667777642 458899988765432221111111112222 35556666654 1 234444
Q ss_pred ------------------cCCCCEEEEEeCCC-----cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 251 ------------------SSDGRIYCSGSKDG-----DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 251 ------------------~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
..++++++.|+.++ .+.+||..+.+-...-...........+.+ ++++++.|+.+
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence 12556777777654 488899887754432211111111223333 56777777753
Q ss_pred C--------------cEEEEEcCCCeeEEE
Q psy15157 308 S--------------LVKLWELSSARCLIA 323 (344)
Q Consensus 308 g--------------~i~vwd~~~~~~~~~ 323 (344)
+ .+.+||+.+.+-...
T Consensus 254 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 254 TLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred ccCcCCccccccccCcEEEecCCCChhhhh
Confidence 2 378899988765444
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.22 E-value=0.66 Score=41.35 Aligned_cols=65 Identities=14% Similarity=0.249 Sum_probs=40.5
Q ss_pred CcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeee------ccccceEEEEEecC---CCEEEEEe
Q psy15157 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI------QESTFVRCLSFHPC---GDYMVVGT 242 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~l~~~~ 242 (344)
.-...+.|+|.|+|+++++-...+.|++++..++......... .....+..|+|+|+ +.+|+++.
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3446789999999997776544457888876554432211111 12345678999996 56665543
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.9 Score=38.87 Aligned_cols=61 Identities=16% Similarity=0.289 Sum_probs=38.3
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceee---eccccceEEEEEecC---CCEEEEEe
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT---IQESTFVRCLSFHPC---GDYMVVGT 242 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~ 242 (344)
-..-..++|.|++.++++ ..+|.|++++ +++....... .........++++|+ +..|+++.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEE
Confidence 345679999999986655 5669999998 3332111110 112345788999997 55665543
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=94.77 E-value=2 Score=37.80 Aligned_cols=180 Identities=12% Similarity=0.198 Sum_probs=105.2
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 125 GAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVK 204 (344)
Q Consensus 125 ~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 204 (344)
.-.+|..+.+|-=. ..++.|||+++. ..+...... ..|..-.|-.+. .|+-.+ +..|+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K------------------~klks~~~~-e~VvfWkWis~~-~l~lVT-~taVy 128 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMK------------------SKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVY 128 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTT------------------EEEEEEECS-SCCCEEEEEETT-EEEEEC-SSEEE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHh------------------hhhcceecC-CCceEEEecCCC-eEEEEc-CCeeE
Confidence 34566666666554 688999999742 223333322 345555665443 333333 57899
Q ss_pred EEEcCCCc-cccceeeec--cccceEEEEEecCCCEEEEEe---C----CCEEEEEcCC---------------------
Q psy15157 205 MFDYSKSS-VRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGT---D----HFVLRLYSSD--------------------- 253 (344)
Q Consensus 205 iwd~~~~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~---~----~~~i~~~~~~--------------------- 253 (344)
-|++.... ..+.+.... ....|.....+++.++++..+ . .|.+.+|+.+
T Consensus 129 HWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g 208 (494)
T 1bpo_A 129 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEG 208 (494)
T ss_dssp EEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTT
T ss_pred EecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCC
Confidence 99997532 122222111 234567777788899887543 1 3566676321
Q ss_pred ----CCEEEEEeCC---CcEEEEeCCCC--------eEEeee--cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 254 ----GRIYCSGSKD---GDIKIWDGVSS--------KCVATF--SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 254 ----~~~l~~~~~d---g~i~iwd~~~~--------~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
...++.+... +.++|.++... +....+ .......-..++..++.-..++.-+.-|.|++||+.
T Consensus 209 ~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDle 288 (494)
T 1bpo_A 209 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (494)
T ss_dssp CSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecc
Confidence 1233333332 67888887432 111111 111112235678888888889999999999999999
Q ss_pred CCeeEEEeec
Q psy15157 317 SARCLIAYTG 326 (344)
Q Consensus 317 ~~~~~~~~~~ 326 (344)
+|.++..-+-
T Consensus 289 Tgt~i~~nrI 298 (494)
T 1bpo_A 289 TGTCIYMNRI 298 (494)
T ss_dssp TCCEEEEEEC
T ss_pred cceeeeeecc
Confidence 9999876553
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=94.69 E-value=4.1 Score=40.98 Aligned_cols=74 Identities=18% Similarity=0.112 Sum_probs=45.7
Q ss_pred CCceEEEEECCC------CCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc--C
Q psy15157 119 KSPCRAGAFSID------GQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH--P 189 (344)
Q Consensus 119 ~~~v~~~~~s~~------~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~ 189 (344)
...|.|+++.+. ++++|.|.. |++|+|+++.+..... ...+.. .....++.+. .
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~----------------~~~L~~-~~~p~si~l~~~~ 615 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLH----------------KEMLGG-EIIPRSILMTTFE 615 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEE----------------EEECCS-SCCEEEEEEEEET
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEE----------------EEECCC-CCCCcEEEEEEeC
Confidence 458999999863 469999997 9999999997432111 111111 1122222222 2
Q ss_pred CCCEEEEEeCCCcEEEEEcC
Q psy15157 190 SAPILASGSKDKTVKMFDYS 209 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~ 209 (344)
...+|..|-.||.+.-+.+.
T Consensus 616 ~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 616 SSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TEEEEEEEETTSEEEEEEEC
T ss_pred CCcEEEEEeCCCeEEEEEEc
Confidence 33478889999998766554
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=94.68 E-value=1.8 Score=36.91 Aligned_cols=114 Identities=12% Similarity=0.044 Sum_probs=65.6
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe----cCCcCCeEEEEE
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL----YDHIEEVTCLEF 187 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~ 187 (344)
...+...-...+.|+|.|+|+++++--..|.|++++...+.. ..+..+ ....+....|++
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~----------------~~v~~~~~v~~~g~~GllGia~ 87 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK----------------TELGEVPGVSPSGEGGLLGIAL 87 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----------------EEEEECTTCCCBTTBSEEEEEE
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE----------------eeecccCceeecCCCCceeeEe
Confidence 334445556789999999999888776589999887542211 111111 223456889999
Q ss_pred cCC----CCEEEEE--eCCCcEEEEEcCCCc-----c---ccceeee--ccccceEEEEEecCCCEEEEE
Q psy15157 188 HPS----APILASG--SKDKTVKMFDYSKSS-----V---RKAHKTI--QESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 188 ~~~----~~~l~s~--~~dg~i~iwd~~~~~-----~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 241 (344)
+|+ +.++++- ..++.|.-|.+.... . ...+... ........|.|.|+|.++++.
T Consensus 88 ~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 88 SPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp CTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEEC
T ss_pred ccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEE
Confidence 995 4344432 244566666665421 1 1111111 112234568999999766653
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.55 E-value=0.11 Score=44.24 Aligned_cols=120 Identities=8% Similarity=0.062 Sum_probs=71.0
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEE-eCCCcEEEEe
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSG-SKDGDIKIWD 270 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~-~~dg~i~iwd 270 (344)
.+++.++.||.|.-+|..+++....+... ...++.... .+... .++..++.. +.||.|..+|
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~-~~~~~---------------~~~~~~vv~p~~dG~l~a~~ 73 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQ-EPSRL---------------ETYETLIIEPFGDGNIYYFN 73 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECC-CSCTT---------------TSSEEEEECCSTTTEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEec-CCccc---------------cCCcEEEEEECCCCEEEEEE
Confidence 36888999999999999998776655432 111221111 01000 022223233 5788888888
Q ss_pred CCCCeEEeeecccC--CCccEEE---EEE-c----cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 271 GVSSKCVATFSKAH--DGAEISS---LTF-T----RNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 271 ~~~~~~~~~~~~~~--~~~~v~~---i~~-~----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
..+|.....+.... ..+++.. ... . ..+..+++|+.+|.+...|+++|+.+.++....
T Consensus 74 ~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~ 141 (339)
T 2be1_A 74 AHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGS 141 (339)
T ss_dssp TTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTC
T ss_pred CCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCC
Confidence 88775544332110 1111211 001 0 145678999999999999999999999997653
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=94.51 E-value=1.9 Score=36.40 Aligned_cols=161 Identities=6% Similarity=-0.044 Sum_probs=89.2
Q ss_pred ceEEEEE---CCCCCEEEEEeC-------------CCeEEEEEcC---CccccccCCCCCCcCCCCCCceEEEecCC---
Q psy15157 121 PCRAGAF---SIDGQLCATGSV-------------DASIKILDVD---RMLAKSSMESSEPQNDQQGHPVIRTLYDH--- 178 (344)
Q Consensus 121 ~v~~~~~---s~~~~~l~sg~~-------------dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--- 178 (344)
.+..+.| .++++++++... +..|..||+. ++... ....+...
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~----------------~~~dL~~~~~~ 127 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPV----------------WSVNFEKVQDE 127 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCS----------------EEEESHHHHHH
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEE----------------EEecCcccccc
Confidence 3578999 688888876442 6779999986 32111 11122111
Q ss_pred --------cCCeEEEEEcCCCCEEEEEeCC-CcEEEEEcCCCccccceeee----ccccceEEEEEecCCCEEEEEeCCC
Q psy15157 179 --------IEEVTCLEFHPSAPILASGSKD-KTVKMFDYSKSSVRKAHKTI----QESTFVRCLSFHPCGDYMVVGTDHF 245 (344)
Q Consensus 179 --------~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~ 245 (344)
.....+++..++|+..++++.- +.|...+..... ....... ......+.|+++|+|..|++
T Consensus 128 ~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv----- 201 (334)
T 2p9w_A 128 FEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIA----- 201 (334)
T ss_dssp HHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEE-----
T ss_pred ccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEE-----
Confidence 1247899999999999998888 887777765432 1111111 11123557788887666654
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--Eeeec-ccC-CCccEEEE-EEccCCCE-EEEEeCCCcEEEEEcCC
Q psy15157 246 VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC--VATFS-KAH-DGAEISSL-TFTRNGKY-LLSSGKDSLVKLWELSS 317 (344)
Q Consensus 246 ~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~-~~~-~~~~v~~i-~~~~~~~~-l~s~~~dg~i~vwd~~~ 317 (344)
....|.+..+|+..... +..-. +.. .......| .-..+|+. |++.+..+.+.+.+-..
T Consensus 202 --------------~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 202 --------------FGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp --------------ESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred --------------EcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 43478888888774322 11100 100 11123343 33347777 44445566555555433
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.30 E-value=2 Score=35.80 Aligned_cols=66 Identities=9% Similarity=0.240 Sum_probs=37.8
Q ss_pred CCCEEEEEeC-C-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCCee
Q psy15157 253 DGRIYCSGSK-D-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-----LVKLWELSSARC 320 (344)
Q Consensus 253 ~~~~l~~~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~ 320 (344)
++++++.|+. + ..+.+||..+.+-...-........-.++.+ +++.++.|+.++ .+.+||+.+.+-
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 4566677765 2 4688899887754332211111111222233 677777777654 488899987654
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.24 E-value=2.2 Score=36.17 Aligned_cols=87 Identities=17% Similarity=0.229 Sum_probs=52.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccc-----eEEEEEe-----cCCCEEEEEeCCCEEEE-------Ec--
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF-----VRCLSFH-----PCGDYMVVGTDHFVLRL-------YS-- 251 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----v~~~~~~-----~~~~~l~~~~~~~~i~~-------~~-- 251 (344)
+..+++|+.+|.+...|+.+++.+..+........ ..|.... ..+..++.+..+..+.. |.
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~~sG~~W~~~ 190 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHSYDGASYNVT 190 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECCTTSCCCCCE
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEECCCCCeEEEe
Confidence 44778999999999999999987766543221110 1111111 12355666655444444 41
Q ss_pred --------------------CCCCEEEEEeCCCcEEEEeCCCCeEEe
Q psy15157 252 --------------------SDGRIYCSGSKDGDIKIWDGVSSKCVA 278 (344)
Q Consensus 252 --------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~ 278 (344)
.++.+ +.++.||.|.-+|..+|+.+.
T Consensus 191 ~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 191 YSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred cccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 12555 457899999999999888765
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=94.10 E-value=1.1 Score=38.29 Aligned_cols=60 Identities=10% Similarity=0.068 Sum_probs=38.1
Q ss_pred cCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceee----eccccceEEEEEecC---CCEEEEEe
Q psy15157 179 IEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT----IQESTFVRCLSFHPC---GDYMVVGT 242 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~ 242 (344)
-.....++|.|++.++++ ..+|.|+++|. +++ ..+.. .........++++|+ +..|+++.
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 445789999999985554 56699999973 443 11111 112345788999997 55555543
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=93.92 E-value=4 Score=37.91 Aligned_cols=177 Identities=12% Similarity=0.041 Sum_probs=92.5
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC-CCEEEEE
Q psy15157 120 SPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS-APILASG 197 (344)
Q Consensus 120 ~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~ 197 (344)
..+..++|.+.+. ++.+-...+.|+.++.+.. .....+.........+++... ++++++-
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~------------------~~~~v~~~~~~~p~GlAvD~~~~~lY~tD 410 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS------------------GSQFVVTAQIAHPDGIAVDWVARNLYWTD 410 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------SCEEEECSSCSCCCEEEEETTTTEEEEEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC------------------ccEEEEECCCCCcCceEEecccCcEEEEe
Confidence 3467788887444 4444445677877777521 111122223345678889864 4466666
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC--CCEEEEEcCCC---------------------
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD--HFVLRLYSSDG--------------------- 254 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~i~~~~~~~--------------------- 254 (344)
+..+.|.+.++.... ...+. ...-.....++++|...+++.... ...|.....+|
T Consensus 411 ~~~~~I~v~~~~G~~-~~~l~-~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~ 488 (619)
T 3s94_A 411 TGTDRIEVTRLNGTM-RKILI-SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDY 488 (619)
T ss_dssp TTTTEEEEEETTSCS-CEEEE-CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEET
T ss_pred CCCCcEEEEeCCCCe-EEEEE-ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcc
Confidence 667899999987542 22221 223345788999997556655542 23444432222
Q ss_pred ---CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 255 ---RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 255 ---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+++++=+..+.|..+++........+. ..- ....+++... +...++-...+.|...|..+|.
T Consensus 489 ~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~l-~~P~glav~~-~~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 489 DEGKIYWGDAKTDKIEVMNTDGTGRRVLVE-DKI-PHIFGFTLLG-DYVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEEE-CCC-CSSCCEEEET-TEEEEECTTSSCEEEEESSSCC
T ss_pred cCCEEEEEECCCCEEEEEecCCCceEEEec-cCC-CCcEEEEEEC-CEEEEeecCCCeEEEEEcCCCc
Confidence 222222333455555553322111111 111 1123455543 3444444566778888887773
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=93.88 E-value=2.5 Score=35.29 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=66.6
Q ss_pred CCCEEEEEeCC-------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC------CCEEEEEc-----
Q psy15157 190 SAPILASGSKD-------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD------HFVLRLYS----- 251 (344)
Q Consensus 190 ~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~~i~~~~----- 251 (344)
++.+++.|+.+ ..+.+||..+.+...............++. .++..++.|+. ...+..|+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56677777754 347888887765432211111111111112 35555566543 12344442
Q ss_pred ------------------CCCCEEEEEeCC-----CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-
Q psy15157 252 ------------------SDGRIYCSGSKD-----GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD- 307 (344)
Q Consensus 252 ------------------~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d- 307 (344)
.++++++.|+.+ ..+.+||..+.+....-...........+.+ ++++++.||.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 264 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAM 264 (318)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCC
T ss_pred EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeec
Confidence 245666666643 3477888877654332111111111222222 56777777654
Q ss_pred -------------CcEEEEEcCCCeeEEE
Q psy15157 308 -------------SLVKLWELSSARCLIA 323 (344)
Q Consensus 308 -------------g~i~vwd~~~~~~~~~ 323 (344)
..+.+||+.+.+-...
T Consensus 265 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 265 IQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp BC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred cCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 4588999988766544
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=93.72 E-value=1.2 Score=42.09 Aligned_cols=120 Identities=13% Similarity=0.211 Sum_probs=58.8
Q ss_pred CCCCEEEEEeCCC--cEEEEEcCCCcccccee---eeccccceEEEEEecC-CCEEEEEeCCCEEEEEcCCCCEEEEEeC
Q psy15157 189 PSAPILASGSKDK--TVKMFDYSKSSVRKAHK---TIQESTFVRCLSFHPC-GDYMVVGTDHFVLRLYSSDGRIYCSGSK 262 (344)
Q Consensus 189 ~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~~~~~~~l~~~~~ 262 (344)
.++.+++.|+.++ .+.+||..+.+...... .........++.+..+ +..++.|+.+. ++ ...
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~-------~~-----~~~ 566 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFM-------DQ-----TTV 566 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCT-------TS-----SCB
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCC-------CC-----Cee
Confidence 3778888888755 68999988865432221 0001111122333433 33333322110 00 001
Q ss_pred CCcEEEEeCCCCe------EEeeecc-cCCCccEEEEEEccCCCEEEEEeC--------CCcEEEEEcCCCeeE
Q psy15157 263 DGDIKIWDGVSSK------CVATFSK-AHDGAEISSLTFTRNGKYLLSSGK--------DSLVKLWELSSARCL 321 (344)
Q Consensus 263 dg~i~iwd~~~~~------~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~--------dg~i~vwd~~~~~~~ 321 (344)
-..+.+||..+.. ....... ........+ +...++++++.||. ...|.+||+.+.+..
T Consensus 567 ~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 567 SDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI-KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEE-EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred eCcEEEEEccCCccccceEEEEcCCCCCCCcccceE-EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 2458889987766 1111110 011111223 33334777777774 345999999887654
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=93.59 E-value=3.1 Score=35.46 Aligned_cols=67 Identities=12% Similarity=0.151 Sum_probs=48.3
Q ss_pred EEEEEeCCCcEEEEeC-------CCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC-----CCeeEEE
Q psy15157 256 IYCSGSKDGDIKIWDG-------VSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS-----SARCLIA 323 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~-------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~-----~~~~~~~ 323 (344)
++++...+|.+..|++ .+.+.++++... +.+-.|..++....|+.+-++.-|..++.. +++.+..
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~ 221 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN---SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDR 221 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS---SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEE
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC---CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEE
Confidence 5777778888988887 234566666543 358899999988999999998777777754 3456655
Q ss_pred ee
Q psy15157 324 YT 325 (344)
Q Consensus 324 ~~ 325 (344)
+.
T Consensus 222 ~~ 223 (355)
T 3amr_A 222 AD 223 (355)
T ss_dssp BS
T ss_pred ec
Confidence 53
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=93.35 E-value=2.4 Score=40.02 Aligned_cols=110 Identities=10% Similarity=0.131 Sum_probs=57.1
Q ss_pred CCCEEEEEeCC------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC
Q psy15157 190 SAPILASGSKD------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKD 263 (344)
Q Consensus 190 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~d 263 (344)
++.+++.|+.+ ..+.+||..+.+.............. +++.-.++..++ .|+.+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv-------------------~GG~~ 510 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLI-------------------LGGVT 510 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEE-------------------ECCBC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEE-------------------ECCCC
Confidence 66777887754 34788888775433221111111111 111112344444 44433
Q ss_pred C--cEEEEeCCCCeEEeeec---ccCCCccEEEEEEccC-CCEEEEEeC--C-----CcEEEEEcCCCe
Q psy15157 264 G--DIKIWDGVSSKCVATFS---KAHDGAEISSLTFTRN-GKYLLSSGK--D-----SLVKLWELSSAR 319 (344)
Q Consensus 264 g--~i~iwd~~~~~~~~~~~---~~~~~~~v~~i~~~~~-~~~l~s~~~--d-----g~i~vwd~~~~~ 319 (344)
+ .+.+||..+......-. .........++.+..+ ++.++.||. + ..+.+||+.+.+
T Consensus 511 ~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 511 EGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 2 68999988876543221 0111111233555655 667777765 2 358899998876
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=93.10 E-value=4.3 Score=35.75 Aligned_cols=161 Identities=9% Similarity=0.091 Sum_probs=96.4
Q ss_pred CCceEEEEECCCCCEEEEEeC-------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 119 KSPCRAGAFSIDGQLCATGSV-------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...|..-..+++.++++..+- .|.+.+|.++ ....+.+.+|.+....+....+.
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-------------------r~~sQ~ieGhaa~F~~~~~~g~~ 210 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-------------------RKVSQPIEGHAASFAQFKMEGNA 210 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-------------------TCCEEEECCSEEEEEEEECTTCS
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc-------------------ccccchheeeeeeeEEEecCCCC
Confidence 356777777889998775432 4678899886 34456778887766555544322
Q ss_pred ---CEEEEEeCC---CcEEEEEcCCCc-ccccee---------eeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCC
Q psy15157 192 ---PILASGSKD---KTVKMFDYSKSS-VRKAHK---------TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGR 255 (344)
Q Consensus 192 ---~~l~s~~~d---g~i~iwd~~~~~-~~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 255 (344)
.+++-+... +.++|-++.... ....+. .....+...++..++....
T Consensus 211 ~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv------------------ 272 (494)
T 1bpo_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV------------------ 272 (494)
T ss_dssp SEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE------------------
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE------------------
Confidence 244444443 789999886531 111110 0011334455555554333
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
++.-+.-|.|++||+.++.++..-+-..+ .|-..+-+....-++.-...|.|.--.+....
T Consensus 273 -iyviTK~G~i~lyDleTgt~i~~nrIs~~--~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 273 -VFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp -EEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred -EEEEecCceEEEEecccceeeeeecccCC--ceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 33567889999999999999877653332 45555555555556666677777666665443
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.10 E-value=2.5 Score=35.84 Aligned_cols=59 Identities=17% Similarity=0.095 Sum_probs=29.7
Q ss_pred cEEEEeCCCCeEE--eeecccCCCccEEEEEEccCCCEEEEEeCCC------cEEEEEcCCCeeEEEeecC
Q psy15157 265 DIKIWDGVSSKCV--ATFSKAHDGAEISSLTFTRNGKYLLSSGKDS------LVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 265 ~i~iwd~~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg------~i~vwd~~~~~~~~~~~~~ 327 (344)
.+.+||..+.+.. ..+.... ..-.++. .+++.++.||.++ .|.++++++++.+..-..+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGR--AYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp CCEEEECC---CEEEEECSSCC--BSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eEEEEecCCCceeeCCCCCCCc--ccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 4778888765432 2232111 1122233 3678888888543 3666788888876655443
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=92.85 E-value=6 Score=36.78 Aligned_cols=183 Identities=10% Similarity=-0.034 Sum_probs=102.7
Q ss_pred CceEEEEECCCCCEEEEE-eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC------CcCCeEEEEEcCCCC
Q psy15157 120 SPCRAGAFSIDGQLCATG-SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD------HIEEVTCLEFHPSAP 192 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~ 192 (344)
..+..++|.+.++.|.-+ ...+.|+.++.+.. . ....+.. ....+..+++...+.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~-----------------~-~~~v~~~~~~~~~~~~~p~glAvD~~~~ 401 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGS-----------------Q-GFTVVVSSVPSQNLEIQPYDLSIDIYSR 401 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-----------------S-CEEEEC--------CCCEEEEEEETTTT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCC-----------------C-ceEEEEcccccccccCCcceEEeeccCC
Confidence 457889998855544444 34677888876421 1 1111111 234678999998765
Q ss_pred -EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCC--EEEEE------------------
Q psy15157 193 -ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHF--VLRLY------------------ 250 (344)
Q Consensus 193 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~--~i~~~------------------ 250 (344)
++++-+..+.|.+.++.. +....+. .........++++|...+++... ... .|...
T Consensus 402 nLY~td~~~~~I~v~~~~G-~~~~~l~-~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P 479 (628)
T 4a0p_A 402 YIYWTCEATNVINVTRLDG-RSVGVVL-KGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKP 479 (628)
T ss_dssp EEEEEETTTTEEEEEETTS-CEEEEEE-ECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCE
T ss_pred eEEEEcCCCCEEEEEECCC-CeEEEEE-eCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCc
Confidence 556767788999999864 3322222 22345678999999555554433 222 34333
Q ss_pred -----cCCCCEEEEE-eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q psy15157 251 -----SSDGRIYCSG-SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324 (344)
Q Consensus 251 -----~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 324 (344)
++.+..|+.+ +..+.|..+|+.... ...+..... ....+++... +..+++-...+.|...|..+|+....+
T Consensus 480 ~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~-r~~~~~~~~-~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~~i 556 (628)
T 4a0p_A 480 IALALDSRLGKLFWADSDLRRIESSDLSGAN-RIVLEDSNI-LQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRTKV 556 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSC-SCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCEEE
T ss_pred cEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc-eEEEEcCCC-CCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcEEE
Confidence 3333333333 334667777764322 222321111 2357777764 555566667778888888877655444
Q ss_pred e
Q psy15157 325 T 325 (344)
Q Consensus 325 ~ 325 (344)
.
T Consensus 557 ~ 557 (628)
T 4a0p_A 557 Q 557 (628)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=92.77 E-value=3.7 Score=34.15 Aligned_cols=65 Identities=18% Similarity=0.368 Sum_probs=35.8
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCe
Q psy15157 253 DGRIYCSGSKD------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-----SLVKLWELSSAR 319 (344)
Q Consensus 253 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~vwd~~~~~ 319 (344)
++.+++.|+.+ ..+.+||..+.+-...-..........++.+ +++.++.||.+ ..+.+||+.+.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 45666666642 3588999887754332111111111222333 56777777643 347789987764
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=92.73 E-value=9.1 Score=38.50 Aligned_cols=69 Identities=10% Similarity=-0.064 Sum_probs=45.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC------CCEEEEEeC-CCcEEEEEcCCCeeEEEee
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN------GKYLLSSGK-DSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~------~~~l~s~~~-dg~i~vwd~~~~~~~~~~~ 325 (344)
.+++.++ ++.+.++++..++...... ..-...|.|+++.|. +++++.|.. |++|+|+++.+.+.+....
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L~~~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~ 599 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQELRQISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEM 599 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEEEEEEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred CEEEEEE-CCEEEEEEeeCCceeeecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEE
Confidence 4455554 5667777766554322111 111246999998763 478999996 9999999998877665544
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=92.36 E-value=5.6 Score=35.42 Aligned_cols=55 Identities=16% Similarity=0.138 Sum_probs=33.7
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCccccceee----ec------cccceEEEEEecC
Q psy15157 180 EEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKT----IQ------ESTFVRCLSFHPC 234 (344)
Q Consensus 180 ~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~------~~~~v~~~~~~~~ 234 (344)
..-+.|+|.|++. .|+.+...|.|++++.........+.. .. ....+..|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4567999999986 344557789999997543211111110 10 1345788999996
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=92.27 E-value=3.2 Score=35.42 Aligned_cols=61 Identities=8% Similarity=0.132 Sum_probs=37.8
Q ss_pred cCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcccccee----e-eccccceEEEEEecC---CCEEEEE
Q psy15157 179 IEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHK----T-IQESTFVRCLSFHPC---GDYMVVG 241 (344)
Q Consensus 179 ~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~----~-~~~~~~v~~~~~~~~---~~~l~~~ 241 (344)
-.....|+|.|+++ +++ +...|.|++++.. +.....+. . .........++++|+ +.+|+++
T Consensus 17 l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp ESSEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCCcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 34568999999998 555 4567999999853 22211111 0 112345688999996 5555554
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.42 E-value=2.1 Score=36.39 Aligned_cols=21 Identities=19% Similarity=0.422 Sum_probs=14.3
Q ss_pred CCCEEEEEeC-C---------CeEEEEEcCC
Q psy15157 130 DGQLCATGSV-D---------ASIKILDVDR 150 (344)
Q Consensus 130 ~~~~l~sg~~-d---------g~v~iwd~~~ 150 (344)
++++++.|+. + ..+.+||..+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 5777777776 2 3577888764
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=90.97 E-value=9.9 Score=38.91 Aligned_cols=175 Identities=11% Similarity=0.216 Sum_probs=98.9
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEEEEeCCCcEE
Q psy15157 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILASGSKDKTVK 204 (344)
Q Consensus 126 ~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~ 204 (344)
-.+|..+.+|-=. ..++.|||+++... +..+.. ...|.--.|-.... -|+| +..|+
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~k------------------lks~~~-~e~VvfWkWis~~~l~lVT---~~aVy 128 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSK------------------MKAHTM-TDDVTFWKWISLNTVALVT---DNAVY 128 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhh------------------hccccc-CCCceEEEecCCCeeEEEc---CCeEE
Confidence 3456666555543 67899999974211 111111 23566666754443 2333 46799
Q ss_pred EEEcCCCc-cccceeeec--cccceEEEEEecCCCEEEEEe-------CCCEEEEEc-----------------------
Q psy15157 205 MFDYSKSS-VRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGT-------DHFVLRLYS----------------------- 251 (344)
Q Consensus 205 iwd~~~~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-------~~~~i~~~~----------------------- 251 (344)
-|++.... ..+.+.... ....|..-..+++.++++..+ -.|.+.+||
T Consensus 129 HW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~ 208 (1630)
T 1xi4_A 129 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEG 208 (1630)
T ss_pred EeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCC
Confidence 99996422 111221110 134566677788888887543 246777772
Q ss_pred -CC-CCEEEEEeC---CCcEEEEeCCCC---eEEe------e-ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 252 -SD-GRIYCSGSK---DGDIKIWDGVSS---KCVA------T-FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 252 -~~-~~~l~~~~~---dg~i~iwd~~~~---~~~~------~-~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+. ...++.+.. .+.++|-++... .... . +.......-..++..++.-..+..-+.-|.|+++|+.
T Consensus 209 ~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~ 288 (1630)
T 1xi4_A 209 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (1630)
T ss_pred CCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecc
Confidence 22 223333322 267888887543 1110 0 1110111224567777777788888999999999999
Q ss_pred CCeeEEE
Q psy15157 317 SARCLIA 323 (344)
Q Consensus 317 ~~~~~~~ 323 (344)
||.++..
T Consensus 289 t~~~i~~ 295 (1630)
T 1xi4_A 289 TGTCIYM 295 (1630)
T ss_pred cchhhhh
Confidence 9987643
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=90.73 E-value=6.4 Score=35.87 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=71.0
Q ss_pred eEEEEEcCCCCEEEE-EeCCCcEEEEEcCCCcc---------ccc-eeeeccccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 182 VTCLEFHPSAPILAS-GSKDKTVKMFDYSKSSV---------RKA-HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 182 v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~---------~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
...+..+|||++++. |-.+.++.++|+++-.. ... .....-.-.....+|+++| ..+
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aY----------- 392 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAY----------- 392 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEE-----------
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceE-----------
Confidence 346788999997655 45689999999875211 000 1111223445667888766 333
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCC----------eEEeeecccCCCccEEEEEE------ccCCCEEEEEe---CCCcE-
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSS----------KCVATFSKAHDGAEISSLTF------TRNGKYLLSSG---KDSLV- 310 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~----------~~~~~~~~~~~~~~v~~i~~------~~~~~~l~s~~---~dg~i- 310 (344)
.+.-.|..|.-|++... ..+..+.-+. .+-.+.- .++|+||++.. .|..+
T Consensus 393 -------TtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y---qpGH~~~~~get~~~dGk~lv~lnK~skdrfl~ 462 (638)
T 3sbq_A 393 -------TTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY---QPGHLHASLCETNEADGKWLVALSKFSKDRFLP 462 (638)
T ss_dssp -------EEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS---CEEEEEETTTTSTTCCSCEEEEEESCCTTSSCC
T ss_pred -------eeeeecceEEEEeccHHHHHhcCccCCeeeecccccc---CCcccccCCCccCCCCccEEEEecccccccCcC
Confidence 25668888999987643 3344443222 2333433 57899999974 56554
Q ss_pred ---------EEEEcCCCee
Q psy15157 311 ---------KLWELSSARC 320 (344)
Q Consensus 311 ---------~vwd~~~~~~ 320 (344)
.+.|+...+.
T Consensus 463 vGpl~pen~QlidIsGdkM 481 (638)
T 3sbq_A 463 VGPLHPENDQLIDISGDEM 481 (638)
T ss_dssp CSSSCCEEEEEEECSSSSC
T ss_pred CCCCCCCcceeEecCCCce
Confidence 7888865543
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=89.51 E-value=2.3 Score=41.73 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=34.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 47778888889999999999999999999999998864
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=88.32 E-value=6.6 Score=38.56 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=30.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSM 157 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~ 157 (344)
.+.+++..++..+++|-+.|+++|+|++.++.+....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5677777788889999999999999999987665443
|
| >4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-} | Back alignment and structure |
|---|
Probab=87.23 E-value=2.2 Score=42.94 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=33.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+.+++..++..++++-+.|+++|+|++.+++++.+..-
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 355666777889999999999999999999999998753
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=84.20 E-value=17 Score=30.16 Aligned_cols=120 Identities=8% Similarity=0.119 Sum_probs=63.2
Q ss_pred EEcCCCCEEEEEeC-C-------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe--CCCEEEE
Q psy15157 186 EFHPSAPILASGSK-D-------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT--DHFVLRL 249 (344)
Q Consensus 186 ~~~~~~~~l~s~~~-d-------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~i~~ 249 (344)
-+++++.+|+=+.. + ..|+..++...+... +. .. . +..|++++++|+... .++.-.+
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~--~~--~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LD--PD--P--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EE--CS--C--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-ee--cC--C--ccEEEEeCCEEEEEeecCCCCceE
Confidence 45677776654433 2 457777776653211 11 11 1 225677888887765 2333333
Q ss_pred E--------------------cCCCCEEEEEeC-CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-
Q psy15157 250 Y--------------------SSDGRIYCSGSK-DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD- 307 (344)
Q Consensus 250 ~--------------------~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d- 307 (344)
| +++++.|+-.+. ...|.+-++..+.....+. . ... ..++|++.+|+-...+
T Consensus 132 y~~~~dGs~~~~lt~~~~~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-~----~~~-~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 132 YRIRIDGEEKKKIKNHYLFTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-C----NCY-KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp EEEETTSCCCEEEESSCCCCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-S----CEE-EEEEEETTEEEEEEGGG
T ss_pred EEEECCCCCeEEEeCCCceEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-C----Ccc-ceeeecCCEEEEEEcCC
Confidence 3 345555554443 5678888877665433332 1 122 2355888877655432
Q ss_pred -CcEEEEEcCCC
Q psy15157 308 -SLVKLWELSSA 318 (344)
Q Consensus 308 -g~i~vwd~~~~ 318 (344)
..|..-++..+
T Consensus 206 ~~~I~~~~ldG~ 217 (302)
T 3s25_A 206 DNAIVHVNINNP 217 (302)
T ss_dssp TTEEEEECSSSC
T ss_pred CcEEEEEECCCC
Confidence 34555555443
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=80.34 E-value=31 Score=30.60 Aligned_cols=116 Identities=18% Similarity=0.134 Sum_probs=59.2
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE-ecCCcCCeEEEEEcCC----CCE
Q psy15157 120 SPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT-LYDHIEEVTCLEFHPS----API 193 (344)
Q Consensus 120 ~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~----~~~ 193 (344)
...+.|+|.|+|. .|+.+...|.|++++.+......... +... ..... ..........|+|+|+ +.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~------~~~~-~~~~g~~~~~e~Gllgia~~P~f~~n~~l 86 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYL------DIHK-LVQSGIKGGDERGLLSLAFHPNYKKNGKL 86 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSE------ECTT-TBCCCCSSSCCCSEEEEEECTTHHHHCEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeec------CCcc-eeccCccccCCCcceeeEeCCCCcCCCEE
Confidence 4678999999996 44455678999999753211000000 0000 00000 0012456789999996 444
Q ss_pred EEEEeC--C----------CcEEEEEcCCC--c------cccceeee--ccccceEEEEEecCCCEEEEEe
Q psy15157 194 LASGSK--D----------KTVKMFDYSKS--S------VRKAHKTI--QESTFVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 194 l~s~~~--d----------g~i~iwd~~~~--~------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 242 (344)
+++-+. + ..|.-|.+... . ....+... ........|.|.|+|.+.++.+
T Consensus 87 Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 87 YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 444332 1 13444665431 0 01111111 1234467899999997666544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 344 | ||||
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-23 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 8e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-10 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-09 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-22 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-21 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-13 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 4e-21 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-17 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-15 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 5e-08 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-13 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-10 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 3e-07 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 0.004 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-13 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 7e-10 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 0.002 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 9e-12 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 8e-10 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-08 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 7e-11 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-09 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 7e-09 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 9e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.001 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-10 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 4e-09 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-09 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-09 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-10 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 5e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 7e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 6e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-10 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 8e-08 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 1e-07 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-10 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-07 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-10 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 3e-07 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-07 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-09 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-05 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 7e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 9e-09 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-08 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-06 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 9e-06 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 8e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 6e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 9e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 9e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 0.002 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 8e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-05 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 7e-05 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-07 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 7e-07 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-06 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-04 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 2e-06 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 6e-06 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 2e-04 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 0.001 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 97.9 bits (242), Expect = 1e-23
Identities = 36/183 (19%), Positives = 64/183 (34%), Gaps = 39/183 (21%)
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
+L +G+ DAS K+ DV +T H ++ + F P+
Sbjct: 196 TRLFVSGACDASAKLWDVRE------------------GMCRQTFTGHESDINAICFFPN 237
Query: 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
A+GS D T ++FD + + +SF G ++
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL----------- 286
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
+G D + +WD + + HD +S L T +G + + DS +
Sbjct: 287 --------AGYDDFNCNVWDALKADRAGVL-AGHDNR-VSCLGVTDDGMAVATGSWDSFL 336
Query: 311 KLW 313
K+W
Sbjct: 337 KIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 65.9 bits (159), Expect = 1e-12
Identities = 31/164 (18%), Positives = 64/164 (39%), Gaps = 21/164 (12%)
Query: 163 QNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQE 222
D + T H +V L P + SG+ D + K++D + R+ +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 223 STFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
+ + F P +G + +GS D +++D + + + T+S
Sbjct: 228 D--INAICFFP-------------------NGNAFATGSDDATCRLFDLRADQELMTYSH 266
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ I+S++F+++G+ LL+ D +W+ A G
Sbjct: 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.1 bits (144), Expect = 8e-11
Identities = 28/202 (13%), Positives = 59/202 (29%), Gaps = 8/202 (3%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQ------NDQQGHPV 171
H + A + D +L + S D + I D ++ +
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 172 IRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSF 231
L + + + + + + + + +
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 232 HPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISS 291
T + + D R++ SG+ D K+WD C TF H+ I++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESD-INA 231
Query: 292 LTFTRNGKYLLSSGKDSLVKLW 313
+ F NG + D+ +L+
Sbjct: 232 ICFFPNGNAFATGSDDATCRLF 253
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 58.6 bits (140), Expect = 3e-10
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 18/90 (20%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
+ +FS G+L G D + + D + L
Sbjct: 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA------------------DRAGVLAG 310
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
H V+CL +A+GS D +K+++
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.9 bits (133), Expect = 2e-09
Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 29/210 (13%)
Query: 144 KILDVDRMLAKSSMESSEPQNDQQGHPVI---RTLYDHIEEVTCLEFHPSAPILASGSKD 200
+I D + A +++ D G + RTL H+ ++ + + + +L S S+D
Sbjct: 17 QIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQD 76
Query: 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG------ 254
+ ++D + K H S++V ++ P G+Y+ G + +Y+
Sbjct: 77 GKLIIWDSYTT--NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134
Query: 255 ------------------RIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
+ GD T + ++ SL+
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194
Query: 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ + +S D+ KLW++ C +TG
Sbjct: 195 DTRLFVSGACDASAKLWDVREGMCRQTFTG 224
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 94.0 bits (232), Expect = 1e-22
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 25/200 (12%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSME--SSEPQNDQQGHPVIRT 174
H+ R + DG L A+ S D ++++ V K+ + + +
Sbjct: 141 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYS 200
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
+ P L SGS+DKT+KM+D S + +VR + FH
Sbjct: 201 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL--MTLVGHDNWVRGVLFHSG 258
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294
G +++ S + D +++WD + +C+ T AH+ ++SL F
Sbjct: 259 GKFIL-------------------SCADDKTLRVWDYKNKRCMKTL-NAHEHF-VTSLDF 297
Query: 295 TRNGKYLLSSGKDSLVKLWE 314
+ Y+++ D VK+WE
Sbjct: 298 HKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 90.6 bits (223), Expect = 2e-21
Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 5/179 (2%)
Query: 149 DRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208
+ +S + + + Q ++T H E V + + ++AS S D+TV+++
Sbjct: 113 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 172
Query: 209 SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYSSDGRIYCSGSKDGDIK 267
+ + + + V C+S+ P Y + + G SGS+D IK
Sbjct: 173 ATKECK--AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 230
Query: 268 IWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+WD + C+ T HD + + F GK++LS D +++W+ + RC+
Sbjct: 231 MWDVSTGMCLMTL-VGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 287
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 68.2 bits (165), Expect = 1e-13
Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 23/178 (12%)
Query: 170 PVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA------------- 216
P L H VT + FHP ++ S S+D T+K++DY +
Sbjct: 8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 67
Query: 217 --------HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKI 268
+ + + C M + +G S S+D IK+
Sbjct: 68 DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKM 127
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
W+ + CV TF+ + + + ++G + S D V++W +++ C
Sbjct: 128 WEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 183
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.1 bits (162), Expect = 4e-13
Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 23/157 (14%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVD--ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR 173
H+ +++ + + + K L S + + D +
Sbjct: 182 REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 241
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
TL H V + FH + S + DKT++++DY K FV L FH
Sbjct: 242 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA--HEHFVTSLDFHK 299
Query: 234 CGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270
Y+V +GS D +K+W+
Sbjct: 300 TAPYVV-------------------TGSVDQTVKVWE 317
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 91.0 bits (224), Expect = 4e-21
Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 26/203 (12%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
DG+ A GS+D ++++ D + ++ +
Sbjct: 204 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE-----------TGFLVERLDSENESGTG 252
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H + V + F + SGS D++VK+++ ++ + KT T H
Sbjct: 253 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVL 312
Query: 238 MVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG-----AEISSL 292
V + + SGSKD + WD S + + H A +
Sbjct: 313 SVA---------TTQNDEYILSGSKDRGVLFWDKKSGNPLLML-QGHRNSVISVAVANGS 362
Query: 293 TFTRNGKYLLSSGKDSLVKLWEL 315
+ + D ++W+
Sbjct: 363 SLGPEYNVFATGSGDCKARIWKY 385
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 81.0 bits (198), Expect = 1e-17
Identities = 44/248 (17%), Positives = 86/248 (34%), Gaps = 29/248 (11%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
+P+ P E H S FS DG+ ATG + + ++ V + +
Sbjct: 44 NPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDD 102
Query: 161 EPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI 220
N + + + + F P LA+G++D+ ++++D + +
Sbjct: 103 SAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGH 162
Query: 221 QESTFVRCLSFHPCGDYMVVG---------------------TDHFVLRLYSSDGRIYCS 259
++ + G + + DG+ +
Sbjct: 163 EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA 222
Query: 260 GSKDGDIKIWDGVSSKCVATFS------KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
GS D +++WD + V H + + S+ FTR+G+ ++S D VKLW
Sbjct: 223 GSLDRAVRVWDSETGFLVERLDSENESGTGHKDS-VYSVVFTRDGQSVVSGSLDRSVKLW 281
Query: 314 ELSSARCL 321
L +A
Sbjct: 282 NLQNANNK 289
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.2 bits (183), Expect = 1e-15
Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 21/162 (12%)
Query: 109 QYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQG 168
E T HK + F+ DGQ +GS+D S+K+ ++ KS
Sbjct: 244 DSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS------KTPNS 297
Query: 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC 228
T H + V + + + SGSKD+ V +D + + + S V
Sbjct: 298 GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS--VIS 355
Query: 229 LSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270
++ + ++ +GS D +IW
Sbjct: 356 VAVANGSS-------------LGPEYNVFATGSGDCKARIWK 384
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.7 bits (122), Expect = 5e-08
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 24/99 (24%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
HK + A + + + +GS D + D +S P + L
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDK---------KSGNP---------LLMLQG 348
Query: 178 HIEEVTCL------EFHPSAPILASGSKDKTVKMFDYSK 210
H V + P + A+GS D +++ Y K
Sbjct: 349 HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 68.7 bits (166), Expect = 1e-13
Identities = 23/164 (14%), Positives = 52/164 (31%), Gaps = 16/164 (9%)
Query: 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVI 172
AY + P A++ D A + + I + +
Sbjct: 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS----------------GNKWVQV 44
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
L +H +VT +++ P + + + D+ ++ + + ++ + RC+ +
Sbjct: 45 HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 104
Query: 233 PCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKC 276
P VG+ V+ + + K I V S
Sbjct: 105 PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 148
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 59.1 bits (141), Expect = 2e-10
Identities = 10/66 (15%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS-KAHDGAEISSLTFTRNGKYLLSSGKDS 308
++ D + ++ I++ +K V K H+G ++ + + + +++ G D
Sbjct: 15 WNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ-VTGVDWAPDSNRIVTCGTDR 73
Query: 309 LVKLWE 314
+W
Sbjct: 74 NAYVWT 79
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 49.5 bits (116), Expect = 3e-07
Identities = 32/241 (13%), Positives = 65/241 (26%), Gaps = 27/241 (11%)
Query: 101 DPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS 160
+S + + + L A GS D +I + +
Sbjct: 123 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT 182
Query: 161 EPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI 220
+ ++ V + F + +A S D TV + D K +
Sbjct: 183 PWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 242
Query: 221 QESTFVRCLSFHPCGDYMVVGTDH---------------FVLRLYSSDGRIYCSGSKDGD 265
++F + G D F RL +
Sbjct: 243 TLPLL--AVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARER 300
Query: 266 IKIWDGVSSKCVATFS-----KAHDGAEISSLTFTRNGKY----LLSSGKDSLVKLWELS 316
+ D +S + + H + +S ++ GK ++G D + +W++
Sbjct: 301 FQNLDKKASSEGSAAAGAGLDSLHKNS-VSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Query: 317 S 317
S
Sbjct: 360 S 360
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.7 bits (101), Expect = 2e-05
Identities = 36/253 (14%), Positives = 78/253 (30%), Gaps = 38/253 (15%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQN----------- 164
H ++ D T D + + + K ++
Sbjct: 48 KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE 107
Query: 165 -------------------DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKM 205
+ V L++HP++ +LA+GS D ++
Sbjct: 108 KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 167
Query: 206 FDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRL-YSSDGRIYCSGSKDG 264
F V + T + + +V + +S++G S D
Sbjct: 168 FSAYIKEVEERPAP----TPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 223
Query: 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAY 324
+ + D + K +A + A + + ++TF L+++G D L+ SA +++
Sbjct: 224 TVCLAD--ADKKMAVATLASETLPLLAVTFITESS-LVAAGHDCFPVLFTYDSAAGKLSF 280
Query: 325 TGAGSMGQQFELT 337
G + +Q
Sbjct: 281 GGRLDVPKQSSQR 293
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 36.4 bits (82), Expect = 0.004
Identities = 5/40 (12%), Positives = 15/40 (37%)
Query: 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328
IS + ++ + + V ++E S + + +
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE 49
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.9 bits (164), Expect = 2e-13
Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 37/199 (18%)
Query: 150 RMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYS 209
R + + + D + + TL H V L+F + SGS D +++++D
Sbjct: 148 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVE 205
Query: 210 KSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------- 250
+ Q T + +V G ++++
Sbjct: 206 TGNCIHTLTGHQSLTS----GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 261
Query: 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG---AEISSLTFTRNGKYLL 302
+ + S DG +K+WD + + + G + + +
Sbjct: 262 AVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCA 321
Query: 303 SSGKD----SLVKLWELSS 317
++ + + + +
Sbjct: 322 VGSRNGTEETKLLVLDFDV 340
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (136), Expect = 7e-10
Identities = 39/228 (17%), Positives = 72/228 (31%), Gaps = 38/228 (16%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
H G +GS D ++K+ + + +RTL
Sbjct: 15 HDDHVIT-CLQFCGNRIVSGSDDNTLKVWSA---------VTGKC---------LRTLVG 55
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG-- 235
H V + + I S + V + + T G
Sbjct: 56 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 115
Query: 236 DYMVVGTDH-------------FVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK 282
D + D +R DGR SG+ D +K+WD + C+ T
Sbjct: 116 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ- 174
Query: 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
G + +G +++S D+ +++W++ + C+ TG S+
Sbjct: 175 ---GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 219
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (109), Expect = 2e-06
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
W K K HD I+ L F G ++S D+ +K+W + +CL G
Sbjct: 1 WRRGELKSPKVL-KGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 55
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (106), Expect = 4e-06
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 241 GTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKY 300
G D V+ G SGS D +K+W V+ KC+ T H G + S N
Sbjct: 14 GHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGG-VWSSQMRDNIII 71
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (85), Expect = 0.002
Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 17/88 (19%)
Query: 127 FSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186
+ T S D ++K+ D+ ++ + E V +
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG-------------SGGVVWRIR 312
Query: 187 FHPSAPILASGSKDKT----VKMFDYSK 210
+ + A GS++ T + + D+
Sbjct: 313 ASNTKLVCAVGSRNGTEETKLLVLDFDV 340
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (151), Expect = 9e-12
Identities = 10/66 (15%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++ G+ + S KD + W + + + + S + + KY+++ D
Sbjct: 273 FAYCGKWFVSTGKDNLLNAWRTPYGASIFQS---KESSSVLSCDISVDDKYIVTGSGDKK 329
Query: 310 VKLWEL 315
++E+
Sbjct: 330 ATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (136), Expect = 8e-10
Identities = 40/295 (13%), Positives = 65/295 (22%), Gaps = 75/295 (25%)
Query: 96 FESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKS 155
F D P +H A S + TG +K+ D+ KS
Sbjct: 28 FPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86
Query: 156 SMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDK-------------- 201
+ + + + P L G +
Sbjct: 87 PVSQ-------------LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRI 133
Query: 202 ---------TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS 252
S S + V L TD S+
Sbjct: 134 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN 193
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS---------------------- 290
DG +G D ++ WD + + +
Sbjct: 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253
Query: 291 ----------------SLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329
SL F GK+ +S+GKD+L+ W + + S
Sbjct: 254 NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS 308
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (126), Expect = 1e-08
Identities = 11/90 (12%), Positives = 26/90 (28%), Gaps = 19/90 (21%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
H+S + F+ G+ + D + G + ++
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP-----------------YGASIFQS--K 304
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
V + + +GS DK +++
Sbjct: 305 ESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.6 bits (93), Expect = 2e-04
Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 251 SSDGRIY-CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
++DG++ D I ++ + T + H + ++T + +++ + GK
Sbjct: 18 TADGQMQPVPFPPDALIGPGIPRHARQINTLN--HGEV-VCAVTISNPTRHVYTGGKGC- 73
Query: 310 VKLWELSSARCLIAYTGAGSMGQQ 333
VK+W++S + + +
Sbjct: 74 VKVWDISHPGNKSPVSQLDCLNRD 97
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.2 bits (144), Expect = 7e-11
Identities = 20/137 (14%), Positives = 35/137 (25%), Gaps = 9/137 (6%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
+ A S D V + + R Y
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252
Query: 238 MVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN 297
V + +S + + DG I W+ + K + F+K + E S + +
Sbjct: 253 PVNSIE------FSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN---EDSVVKIACS 303
Query: 298 GKYLLSSGKDSLVKLWE 314
L + D K
Sbjct: 304 DNILCLATSDDTFKTNA 320
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.6 bits (132), Expect = 3e-09
Identities = 8/76 (10%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS-VRKAHKTIQESTFVRCL 229
+++ + ++ ++ PS +L S D ++ ++ + + ++++ + C
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 230 SFHPCGDYMVVGTDHF 245
+F D +
Sbjct: 63 NFIDNTDLQIYVGTVQ 78
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.1 bits (128), Expect = 7e-09
Identities = 14/130 (10%), Positives = 37/130 (28%), Gaps = 6/130 (4%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185
+ + A S+D + + D + + + + V +
Sbjct: 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN---LKDTNLAYPVNSI 257
Query: 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
EF P L + D + ++ RK K + + + + + T
Sbjct: 258 EFSPRHKFLYTAGSDGIISCWNLQT---RKKIKNFAKFNEDSVVKIACSDNILCLATSDD 314
Query: 246 VLRLYSSDGR 255
+ ++ +
Sbjct: 315 TFKTNAAIDQ 324
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (103), Expect = 9e-06
Identities = 17/231 (7%), Positives = 46/231 (19%), Gaps = 46/231 (19%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
K L S D S+ + D Q + +
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFD---------------IQAKNVDLLQSLR 54
Query: 178 HIEEVTCLEFHPSAP-ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
+ + C F + + G+ + D S +A + + + + +
Sbjct: 55 YKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDK 114
Query: 237 YM----------------------------VVGTDHFVLRLYSSDGRIYCSGSKDGDIKI 268
+ + ++ G + ++
Sbjct: 115 LIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQW 174
Query: 269 WDGVSSKCVATFSKAHD--GAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317
+ + + + + S D V +
Sbjct: 175 FRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.2 bits (92), Expect = 2e-04
Identities = 6/39 (15%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 282 KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARC 320
+A IS + + LL + D + +++
Sbjct: 8 QAPKDY-ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK 45
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.2 bits (92), Expect = 2e-04
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 13/93 (13%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD-------------GAEISSLTFTR 296
+ Y S DG + + SK ++S+ F+
Sbjct: 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261
Query: 297 NGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329
K+L ++G D ++ W L + + + +
Sbjct: 262 RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE 294
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.9 bits (86), Expect = 0.001
Identities = 16/105 (15%), Positives = 29/105 (27%), Gaps = 19/105 (18%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL 175
T+ P + FS + T D I ++ I+
Sbjct: 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ------------------TRKKIKNF 289
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTI 220
E + ++ S IL + D T K ++ +I
Sbjct: 290 AKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSI 333
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.1 bits (141), Expect = 2e-10
Identities = 28/201 (13%), Positives = 62/201 (30%), Gaps = 22/201 (10%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL 175
+ + S G + ATG + +++I ++ + ++
Sbjct: 181 MTPSQFATSVDISERGLI-ATGFNNGTVQISELSTL------------RPLYNFESQHSM 227
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
++ + ++F P +LA + ++ + ++ T S
Sbjct: 228 INNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 287
Query: 236 DYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA---EISSL 292
V + ++ G CS DG ++ WD + + + T H E L
Sbjct: 288 HSSWVMSLS-----FNDSGETLCSAGWDGKLRFWDVKTKERITTL-NMHCDDIEIEEDIL 341
Query: 293 TFTRNGKYLLSSGKDSLVKLW 313
+G L G + L
Sbjct: 342 AVDEHGDSLAEPGVFDVKFLK 362
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.2 bits (131), Expect = 4e-09
Identities = 30/238 (12%), Positives = 73/238 (30%), Gaps = 17/238 (7%)
Query: 116 TSHKSPCRAGAFSIDG-----QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP 170
K A + V + I +S+ + +
Sbjct: 116 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 175
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTF----V 226
+ + + T ++ ++A+G + TV++ + S ++ +
Sbjct: 176 TVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234
Query: 227 RCLSFHPCGDYMVVGT-DHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD 285
R + F P G + + + + + I + A+ +
Sbjct: 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE------RIGSLSVPTHSSQASLGEFAH 288
Query: 286 GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343
+ + SL+F +G+ L S+G D ++ W++ + + + E L VD
Sbjct: 289 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEH 346
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.9 bits (130), Expect = 5e-09
Identities = 21/213 (9%), Positives = 61/213 (28%), Gaps = 32/213 (15%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
H + + + + S D +K+ D +++ P++ H V ++
Sbjct: 13 HDADIFSVSAC--NSFTVSCSGDGYLKVWDN------KLLDNENPKDKSYSHFVHKSGLH 64
Query: 178 HIEEVTCLEF-HPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
H++ + +E ++A+ S + + ++ + K I E +
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITRED--ETKKVIFEKLDLLDSDMKKHSF 122
Query: 237 YMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH------------ 284
+ + + + G IW + +
Sbjct: 123 WAL----KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE 178
Query: 285 ----DGAEISSLTFTRNGKYLLSSGKDSLVKLW 313
+S+ + G + + + V++
Sbjct: 179 SPMTPSQFATSVDISERG-LIATGFNNGTVQIS 210
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.9 bits (130), Expect = 5e-09
Identities = 18/153 (11%), Positives = 38/153 (24%), Gaps = 23/153 (15%)
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H ++ + S S D +K++D S FV H
Sbjct: 13 HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSY-SHFVHKSGLHHVDVL 69
Query: 238 MVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD--------GAEI 289
+ D F + + + S GD+ +
Sbjct: 70 QAIERDAF-------ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF 122
Query: 290 SSLTFTRNG-----KYLLSSGKDSLVKLWELSS 317
+L + + L+++ +W+
Sbjct: 123 WALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 155
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 58.8 bits (140), Expect = 2e-10
Identities = 18/111 (16%), Positives = 30/111 (27%), Gaps = 1/111 (0%)
Query: 205 MFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG 264
++ + + F V + +S DG S S D
Sbjct: 201 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK 260
Query: 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315
IKIW+ + K T E L + L+S + +
Sbjct: 261 TIKIWNVATLKVEKTI-PVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.7 bits (114), Expect = 4e-07
Identities = 34/219 (15%), Positives = 63/219 (28%), Gaps = 13/219 (5%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESS---EPQNDQQGHPVI 172
T H S G CA+G V +++I D + P D
Sbjct: 55 TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES 114
Query: 173 RTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFH 232
+ + E S S I + ++
Sbjct: 115 KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF 174
Query: 233 PCGDYMVVGTDHF-----VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH--- 284
+ T Y+ DG ++ S DG I +++GV F
Sbjct: 175 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 234
Query: 285 --DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321
+ LT++ +G + S+ D +K+W +++ +
Sbjct: 235 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 273
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.4 bits (113), Expect = 5e-07
Identities = 19/114 (16%), Positives = 31/114 (27%), Gaps = 20/114 (17%)
Query: 157 MESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKA 216
+ H V L + P +AS S DKT+K+++ + V K
Sbjct: 216 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT 275
Query: 217 HKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270
+ L +V S S +G I +
Sbjct: 276 IPVGTRIE-DQQLGIIWTKQALV-------------------SISANGFINFVN 309
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.0 bits (112), Expect = 7e-07
Identities = 15/113 (13%), Positives = 34/113 (30%), Gaps = 19/113 (16%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185
+ G + S+ + V + +H + T
Sbjct: 24 GNTPAGDKIQYCN-GTSVYTVPVGSLT------------------DTEIYTEHSHQTTVA 64
Query: 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYM 238
+ PS ASG V+++D ++++ S V+ +S+ +
Sbjct: 65 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRI 117
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.7 bits (88), Expect = 6e-04
Identities = 13/108 (12%), Positives = 26/108 (24%), Gaps = 22/108 (20%)
Query: 226 VRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD 285
L P GD + + S ++ H
Sbjct: 20 AVVLGNTPAGDKIQYCN--------------------GTSVYTVPVGSLTDTEIYT-EHS 58
Query: 286 GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
+ + +G Y S V++W+ + ++ T G
Sbjct: 59 HQ-TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPV 105
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.4 bits (139), Expect = 2e-10
Identities = 22/138 (15%), Positives = 41/138 (29%), Gaps = 2/138 (1%)
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
D + P S S +T + +E R
Sbjct: 149 SDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKI 208
Query: 236 DYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295
+ + + + +GS D +I I+ + AH +++L +
Sbjct: 209 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDG-VNNLLWE 267
Query: 296 RNGKYLLSSGKDSLVKLW 313
L+SSG D+ +K W
Sbjct: 268 TPST-LVSSGADACIKRW 284
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.7 bits (119), Expect = 8e-08
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Query: 168 GHP-VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFV 226
GH V++T+ H + +T L +P L SGS D + + SS+ + H S +
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSS--SSMHQDH-----SNLI 49
Query: 227 RCLSFHPCGDYMVVGTDHF 245
L +Y + D
Sbjct: 50 VSLDNSKAQEYSSISWDDT 68
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.0 bits (117), Expect = 1e-07
Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 18/90 (20%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
+ A I+ L ATGS+D +I I V R +I+ L
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR-----------------PMKIIKALNA 256
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFD 207
H + V L + + L S D +K ++
Sbjct: 257 HKDGVNNLLWETPS-TLVSSGADACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.9 bits (91), Expect = 2e-04
Identities = 16/113 (14%), Positives = 27/113 (23%), Gaps = 29/113 (25%)
Query: 162 PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS----VRKAH 217
I + E E ++A+GS D + ++ + AH
Sbjct: 198 TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH 257
Query: 218 KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270
V L + + S D IK W+
Sbjct: 258 -----KDGVNNLLWET-------------------PSTL-VSSGADACIKRWN 285
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 58.7 bits (140), Expect = 3e-10
Identities = 23/204 (11%), Positives = 47/204 (23%), Gaps = 31/204 (15%)
Query: 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIR 173
T+ S A AF D + S + D + +
Sbjct: 173 AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL-----------NFSFEVVSKPF 221
Query: 174 TLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHP 233
+ + P + +G D S +V R +
Sbjct: 222 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGD--------YRMIIPLE 273
Query: 234 CGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLT 293
+ H Y + G + +D + K ++ L
Sbjct: 274 SSILIYSVPVH------GEFAAYYQGAPEKGVLLKYDVKTRKV-----TEVKN-NLTDLR 321
Query: 294 FTRNGKYLLSSGKDSLVKLWELSS 317
+ + K ++ D + + L
Sbjct: 322 LSADRKTVMVRKDDGKIYTFPLEK 345
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 49.1 bits (115), Expect = 3e-07
Identities = 17/167 (10%), Positives = 29/167 (17%), Gaps = 36/167 (21%)
Query: 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT 174
+ G L SS D + +I
Sbjct: 223 IPLIPGSPNPTKLVPRSMTSEAGEY-----------DLNDMYKRSSPINVDPGDYRMIIP 271
Query: 175 LYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC 234
L I + A + + +D K + + L
Sbjct: 272 LESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT------RKVTEVKNNLTDLRLSA- 324
Query: 235 GDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFS 281
D + DG I + + T
Sbjct: 325 ------------------DRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 57.1 bits (136), Expect = 8e-10
Identities = 11/211 (5%), Positives = 41/211 (19%), Gaps = 31/211 (14%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTC 184
A + + ++ ++DV V ++
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVAS------------------DTVYKSCVMPDKFGPGT 44
Query: 185 LEFHP-SAPILASGSKDKTVKMFDYSKSSVRK----AHKTIQESTFVRCLSFHPCGDYMV 239
P + + + D + + + + P G +
Sbjct: 45 AMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVY 104
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK 299
+ + K ++++ ++ + +G
Sbjct: 105 ATVN-------PTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 157
Query: 300 YLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330
++ + + L
Sbjct: 158 LYVAGPDIYKMDVKTGKYTVALPLRNWNRKG 188
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 49.0 bits (115), Expect = 3e-07
Identities = 13/145 (8%), Positives = 30/145 (20%), Gaps = 24/145 (16%)
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
+ T F A+ D + P
Sbjct: 206 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA-DLTELYFTGLRSPKDP 264
Query: 237 YMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTR 296
+ G + + +D K + + H + F +
Sbjct: 265 NQIYGVLN--------------------RLAKYDLKQRKLIKAANLDHT---YYCVAFDK 301
Query: 297 NGKYLLSSGKDSLVKLWELSSARCL 321
G L G + + ++ + +
Sbjct: 302 KGDKLYLGGTFNDLAVFNPDTLEKV 326
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 48.2 bits (113), Expect = 6e-07
Identities = 5/83 (6%), Positives = 20/83 (24%), Gaps = 2/83 (2%)
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSL 309
+ + ++ + D S + D + + +
Sbjct: 5 KAGHEYMIVTNYPNNLHVVDVASDTVYKSC-VMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 310 VKLWELSSARCLIAYTGAGSMGQ 332
+ +L + + + G+
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGE 86
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 47.0 bits (110), Expect = 2e-06
Identities = 27/183 (14%), Positives = 46/183 (25%), Gaps = 45/183 (24%)
Query: 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY 176
F D Q AT + +D+ + G +
Sbjct: 206 EFSMLYTIARFKDDKQDPATADLLYGYLSVDL-----------------KTGKTHTQEFA 248
Query: 177 DHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD 236
D E P P G + +D + RK K C++F
Sbjct: 249 DLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQ---RKLIKAANLDHTYYCVAFDK--- 301
Query: 237 YMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLT--- 293
G G D+ +++ + + V G ++S+ T
Sbjct: 302 ----------------KGDKLYLGGTFNDLAVFNPDTLEKVKNIK--LPGGDMSTTTPQV 343
Query: 294 FTR 296
F R
Sbjct: 344 FIR 346
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.2 bits (131), Expect = 2e-09
Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 4/201 (1%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185
D Q +G D +IKI D + + K + + + + +
Sbjct: 20 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRV 79
Query: 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
+ +L + + + + + S V+
Sbjct: 80 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 139
Query: 246 VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305
+ + D + S S D IK+W+ + + V T +G + + ++S
Sbjct: 140 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL----NGHKRGIACLQYRDRLVVSGS 195
Query: 306 KDSLVKLWELSSARCLIAYTG 326
D+ ++LW++ CL G
Sbjct: 196 SDNTIRLWDIECGACLRVLEG 216
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (126), Expect = 1e-08
Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 36/167 (21%)
Query: 156 SMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRK 215
S + + + +RTL H + CL++ ++ SGS D T++++D
Sbjct: 155 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIEC----- 207
Query: 216 AHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275
++ L D + SG+ DG IK+WD V++
Sbjct: 208 -GACLRVLEGHEELVRCIRFDNKRI-----------------VSGAYDGKIKVWDLVAAL 249
Query: 276 CVATFS--------KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314
+ H G + L F + ++SS D + +W+
Sbjct: 250 DPRAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (99), Expect = 3e-05
Identities = 30/155 (19%), Positives = 47/155 (30%), Gaps = 34/155 (21%)
Query: 116 TSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL 175
T + +L +GS D +I++ D++ +E E R
Sbjct: 173 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 230
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
+ SG+ D +K++D + +A +R L H
Sbjct: 231 ------------------IVSGAYDGKIKVWDLVAALDPRAPAGTL---CLRTLVEH--- 266
Query: 236 DYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270
V RL D S S D I IWD
Sbjct: 267 -------SGRVFRL-QFDEFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (88), Expect = 7e-04
Identities = 10/52 (19%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ + S+ G + L + + + ++S +D+ +K+W+ ++ C TG
Sbjct: 6 QRIHCRSETSKG--VYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTG 53
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 53.5 bits (126), Expect = 9e-09
Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
Query: 171 VIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230
+ + Y H + +T L L S + + +D S + + + + +
Sbjct: 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT-MITGIK 62
Query: 231 FHPCGDYMVVGTDHFVLRLYSSDGRIYC 258
GD V D + + + +
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDS 90
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 53.5 bits (126), Expect = 1e-08
Identities = 15/86 (17%), Positives = 28/86 (32%)
Query: 231 FHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290
+ T +S D +GS D + +W+ K
Sbjct: 213 ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSV 272
Query: 291 SLTFTRNGKYLLSSGKDSLVKLWELS 316
+ N ++S+G+DS +K W +
Sbjct: 273 NSVIWLNETTIVSAGQDSNIKFWNVP 298
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.9 bits (109), Expect = 2e-06
Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 250 YSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309
S+DG+ S +G I WD + F H I+ + T L + D
Sbjct: 20 SSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATM-ITGIKTTSK-GDLFTVSWDDH 77
Query: 310 VKLWELSSARC 320
+K+ +
Sbjct: 78 LKVVPAGGSGV 88
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.2 bits (102), Expect = 9e-06
Identities = 16/127 (12%), Positives = 29/127 (22%), Gaps = 17/127 (13%)
Query: 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD 177
H A + S DG+ + + I D+ G
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDI-----------------STGISNRVFPDV 53
Query: 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY 237
H +T ++ + D + + S+ L+ GD
Sbjct: 54 HATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDI 113
Query: 238 MVVGTDH 244
V
Sbjct: 114 AVAACYK 120
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 42.7 bits (98), Expect = 3e-05
Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329
H+ A I++L+ + +GK L S+ + + W++S+ + +
Sbjct: 11 HNKA-ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA 55
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.5 bits (95), Expect = 8e-05
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Query: 176 YDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCG 235
H +V C+ + P LA+GS D +V +++ + + + +
Sbjct: 221 TFHTAKVACVSWSPDNVRLATGSLDNSVIVWN------------MNKPSDHPIIIKGA-- 266
Query: 236 DYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWD 270
V + + S +D +IK W+
Sbjct: 267 -----HAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.8 bits (88), Expect = 6e-04
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 16/76 (21%)
Query: 134 CATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193
ATGS+D S+ + +++ HP+I + V + +
Sbjct: 239 LATGSLDNSVIVWNMN---------------KPSDHPIIIKGAHAMSSVNSVIWLNE-TT 282
Query: 194 LASGSKDKTVKMFDYS 209
+ S +D +K ++
Sbjct: 283 IVSAGQDSNIKFWNVP 298
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.4 bits (126), Expect = 1e-08
Identities = 26/186 (13%), Positives = 53/186 (28%), Gaps = 3/186 (1%)
Query: 131 GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190
G + +GS D ++ + DV +M + + + R T +
Sbjct: 171 GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 230
Query: 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250
+ + + S + + + + + T+ + +
Sbjct: 231 ENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTF 290
Query: 251 SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
I SGS + I++ S K V I S+ F + + KD
Sbjct: 291 YVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQ-IWSVNFKGKT-LVAAVEKDGQS 347
Query: 311 KLWELS 316
L L
Sbjct: 348 FLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.7 bits (119), Expect = 9e-08
Identities = 32/195 (16%), Positives = 65/195 (33%), Gaps = 19/195 (9%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185
+ TG+ D I++ D + L H V L
Sbjct: 18 CLQFEDNYVITGADDKMIRVYDSINK------------------KFLLQLSGHDGGVWAL 59
Query: 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF 245
++ IL SGS D+TV+++D K + + + + Y+V G+
Sbjct: 60 KYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 246 VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305
L ++ + + + F G S T + +G ++S
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 306 KDSLVKLWELSSARC 320
D+ + +W+++ +C
Sbjct: 179 YDNTLIVWDVAQMKC 193
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.6 bits (111), Expect = 1e-06
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 246 VLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305
V+ + +G+ D I+++D ++ K + HDG + +L + G + S
Sbjct: 15 VITCLQFEDNYVITGADDKMIRVYDSINKKFLLQL-SGHDGG-VWALKYAHGGILVSGST 72
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (103), Expect = 9e-06
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 21/86 (24%)
Query: 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185
F + + +GS + I ++ + G V + +++ +
Sbjct: 289 TFYVSDNILVSGS-ENQFNIYNL-----------------RSGKLVHANILKDADQIWSV 330
Query: 186 EFHPSAPILASGSKDKTVKM--FDYS 209
F ++A+ KD + D+S
Sbjct: 331 NFKGKT-LVAAVEKDGQSFLEILDFS 355
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.0 bits (94), Expect = 1e-04
Identities = 8/45 (17%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 282 KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326
+ H + I+ L F Y+++ D ++++++ + + L+ +G
Sbjct: 9 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSG 51
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.2 bits (84), Expect = 0.002
Identities = 27/211 (12%), Positives = 68/211 (32%), Gaps = 24/211 (11%)
Query: 132 QLCATGSVDASIKILDVDRM-----LAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLE 186
+ TGS D ++ + + + + ++ + L H+ V +
Sbjct: 109 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS 168
Query: 187 FHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV 246
H I+ SGS D T+ ++D ++ + + H + D +
Sbjct: 169 GHG--NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTI-YDHERKRCISASMDTTI 225
Query: 247 LRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVAT----------------FSKAHDGAEIS 290
+G + + + +S K + + ++ +S
Sbjct: 226 RIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLS 285
Query: 291 SLTFTRNGKYLLSSGKDSLVKLWELSSARCL 321
++T +L SG ++ ++ L S + +
Sbjct: 286 AITTFYVSDNILVSGSENQFNIYNLRSGKLV 316
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.6 bits (124), Expect = 2e-08
Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Query: 228 CLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGA 287
F + + L D + + + D I++WD +SKCV ++
Sbjct: 237 SGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL 296
Query: 288 EISSLTFTRNG-KYLLSSGKDSLVKLWEL 315
+ G ++S D + +EL
Sbjct: 297 GNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.0 bits (112), Expect = 8e-07
Identities = 14/133 (10%), Positives = 39/133 (29%), Gaps = 18/133 (13%)
Query: 138 SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197
V+ S + + S + I + ++ + A+
Sbjct: 210 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATV 269
Query: 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY 257
D T++++D + S + ++ + + G+ ++
Sbjct: 270 GADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII----------------- 312
Query: 258 CSGSKDGDIKIWD 270
S S DG + ++
Sbjct: 313 -SLSLDGTLNFYE 324
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.0 bits (99), Expect = 3e-05
Identities = 23/298 (7%), Positives = 67/298 (22%), Gaps = 42/298 (14%)
Query: 77 SIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFS--IDGQLC 134
+ +P + P F +D + + S FS Q
Sbjct: 22 HLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQ-FTGHGSSVVTTVKFSPIKGSQYL 80
Query: 135 ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194
+G + + + + +++ V ++ + + L
Sbjct: 81 CSGDESGKVIV----------WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 130
Query: 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG 254
+ + S S + S + + ++
Sbjct: 131 CVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP 190
Query: 255 RIYCSGSKDGDIKIWDGVSS-----------------------------KCVATFSKAHD 285
S S K V
Sbjct: 191 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP 250
Query: 286 GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343
+ + + G D+ +++W++++++C+ +T ++ + +
Sbjct: 251 VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN 308
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.8 bits (96), Expect = 7e-05
Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 25/127 (19%)
Query: 182 VTCLEFHPSAPILASGSKDKT-VKMFDYSKSSVRKAHKTIQESTF-VRCLSFHPCGDYMV 239
T L + P+ +A V+ D S V + + V + F P
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK---- 75
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG------AEISSLT 293
+ CSG + G + +W K + IS ++
Sbjct: 76 -------------GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDIS 122
Query: 294 FTRNGKY 300
+ G+
Sbjct: 123 WDFEGRR 129
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 48.6 bits (114), Expect = 4e-07
Identities = 22/285 (7%), Positives = 59/285 (20%), Gaps = 36/285 (12%)
Query: 58 QLVHIGLAHEPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDP------SAPEPAQYE 111
+ + P+ + L+P + L + E + +
Sbjct: 67 ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126
Query: 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILD---VDRMLAKSSMESSEPQNDQQG 168
A++ DG D + + + S E+
Sbjct: 127 RRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVL 186
Query: 169 HPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRC 228
+ + + + D + + F
Sbjct: 187 AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM-AMREVRIMDVFYFS 245
Query: 229 LSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAE 288
+ +P ++ +D + + H
Sbjct: 246 TAVNPAKTRAFG---------------------AYNVLESFDLEKNASIKRVPLPH---S 281
Query: 289 ISSLTFTRNGKYLLSSGKDSLVKLWELSSARCL--IAYTGAGSMG 331
S+ + +G + G + ++ + + G SM
Sbjct: 282 YYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMS 326
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 47.9 bits (112), Expect = 7e-07
Identities = 7/73 (9%), Positives = 20/73 (27%), Gaps = 1/73 (1%)
Query: 259 SGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSS 317
+ ++ + + D + A G G+ ++ K + +L +
Sbjct: 6 APARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65
Query: 318 ARCLIAYTGAGSM 330
L +
Sbjct: 66 GETLGRIDLSTPE 78
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 47.1 bits (110), Expect = 1e-06
Identities = 27/239 (11%), Positives = 58/239 (24%), Gaps = 27/239 (11%)
Query: 60 VHIGLAHEPDRMKRMEPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHK 119
+ R + L G G DL + E ++ ++
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA 181
Query: 120 SPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI 179
P A + + D+D + + + G +R +
Sbjct: 182 QPDVL-AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240
Query: 180 EEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMV 239
+P+ ++ FD K + K + ++ G +
Sbjct: 241 VFYFSTAVNPAKTRAFG--AYNVLESFDLEK---NASIKRVPLPHSYYSVNVSTDGSTVW 295
Query: 240 VGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDG--AEISSLTFTR 296
+G GD+ +D + + + + S FTR
Sbjct: 296 LG-------------------GALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTR 335
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.9 bits (94), Expect = 1e-04
Identities = 13/123 (10%), Positives = 32/123 (26%), Gaps = 21/123 (17%)
Query: 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSD 253
+ + ++ + + D K +V K P G
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYA------------- 50
Query: 254 GRIYCSGSKDGDIKIWDGVSSKCVATF---SKAHDGAEISSLTFTRNGKYLLSSGKDSLV 310
+ +K + D V+ + + + + + +GK L +
Sbjct: 51 -----TVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL 105
Query: 311 KLW 313
+L
Sbjct: 106 ELT 108
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 46.7 bits (110), Expect = 2e-06
Identities = 20/224 (8%), Positives = 51/224 (22%), Gaps = 25/224 (11%)
Query: 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHP 170
+ + + S G+ D + ++D+ +
Sbjct: 54 IKTVLDTGYAV-HISRLSASGRYLFVIGRDGKVNMIDLW-------------MKEPTTVA 99
Query: 171 VIRTLYDHIEEVTCLEFHP-SAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCL 229
I+ + T +A + D +K
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS--TRGMTYDEQ 157
Query: 230 SFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEI 289
+HP + H+ + + G I + D + T + +
Sbjct: 158 EYHPEPRVAAILASHY-------RPEFIVNVKETGKILLVDYTDLNNLKTT-EISAERFL 209
Query: 290 SSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQ 333
+ +Y +++ + + L+A G
Sbjct: 210 HDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPH 253
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 45.2 bits (105), Expect = 6e-06
Identities = 6/67 (8%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Query: 256 IYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDS-LVKLWE 314
+Y + + I +W+ + ++ + + + +YL + V +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 315 LSSARCL 321
++
Sbjct: 66 IAPDDGA 72
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 40.6 bits (93), Expect = 2e-04
Identities = 7/109 (6%), Positives = 31/109 (28%), Gaps = 19/109 (17%)
Query: 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS 252
+ + + + + +++ + + + V+ + P Y
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRY--------------- 50
Query: 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD-GAEISSLTFTRNGKY 300
+Y + + + TF+ ++ ++ G++
Sbjct: 51 ---LYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQF 96
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 37.9 bits (86), Expect = 0.001
Identities = 7/33 (21%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 250 YSSDG-RIYCSGSKDGDIKIWDGVSSKCVATFS 281
+ DG ++Y + S + + D ++ AT +
Sbjct: 251 VTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 344 | |||
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.98 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.97 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.96 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.96 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.96 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.95 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.95 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.94 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.93 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.92 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.92 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.92 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.92 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.91 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.88 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.88 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.88 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.85 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.84 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.84 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.83 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.82 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.82 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.81 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.8 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.76 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.75 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.73 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.68 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.64 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.57 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.55 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.5 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.38 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.38 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.15 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.09 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.97 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.96 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.94 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.9 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.9 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.89 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.82 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.81 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.79 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.69 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.69 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.67 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.65 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.54 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.53 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.47 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.39 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.32 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.29 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.28 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.96 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.74 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.61 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.35 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.85 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.65 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.62 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 96.1 | |
| d1uuja_ | 76 | Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-te | 95.93 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 95.9 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 95.72 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.72 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 95.67 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 95.36 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 95.21 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.12 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.9 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 94.58 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 93.78 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 93.45 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 93.1 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 92.66 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 92.0 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 91.67 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 90.93 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 90.51 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 90.27 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 88.48 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 88.31 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 88.04 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 86.27 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 83.03 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 80.88 |
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.1e-33 Score=239.26 Aligned_cols=200 Identities=19% Similarity=0.397 Sum_probs=172.0
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|.+.|++++|+|+|++||+|+.||+|+|||+.+ ........+..|.+.|.+++|+|++
T Consensus 51 ~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~----------------~~~~~~~~~~~~~~~v~~v~~s~d~ 114 (311)
T d1nr0a1 51 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ----------------TTHILKTTIPVFSGPVKDISWDSES 114 (311)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS----------------TTCCEEEEEECSSSCEEEEEECTTS
T ss_pred eEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeec----------------cccccccccccccCccccccccccc
Confidence 345789999999999999999999999999999999964 2223445678899999999999999
Q ss_pred CEEEEEeC--CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCE-EEEEeCCCEEEEE------------------
Q psy15157 192 PILASGSK--DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDY-MVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 192 ~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~i~~~------------------ 250 (344)
++|++++. +..+++|++.+++....+ ..|...|++++|+|++++ +++|+.|+.+++|
T Consensus 115 ~~l~~~~~~~~~~~~v~~~~~~~~~~~l--~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i 192 (311)
T d1nr0a1 115 KRIAAVGEGRERFGHVFLFDTGTSNGNL--TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV 192 (311)
T ss_dssp CEEEEEECCSSCSEEEEETTTCCBCBCC--CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE
T ss_pred cccccccccccccccccccccccccccc--cccccccccccccccceeeecccccccccccccccccccccccccccccc
Confidence 99999886 466999999987655443 457788999999999886 7789999999998
Q ss_pred -----cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecc------cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 251 -----SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK------AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 251 -----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+|+++++++++.|+.|++||..++..+..+.. .|. ..|++++|+|++++|++|+.||.|+|||+++++
T Consensus 193 ~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~ 271 (311)
T d1nr0a1 193 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS-GSVFGLTWSPDGTKIASASADKTIKIWNVATLK 271 (311)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred cccccCcccccccccccccccccccccccccccccccccccccccc-ccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 78999999999999999999999887776542 233 469999999999999999999999999999999
Q ss_pred eEEEeecCCCc
Q psy15157 320 CLIAYTGAGSM 330 (344)
Q Consensus 320 ~~~~~~~~~~~ 330 (344)
+++++..+...
T Consensus 272 ~~~~l~~~~~~ 282 (311)
T d1nr0a1 272 VEKTIPVGTRI 282 (311)
T ss_dssp EEEEEECCSSG
T ss_pred EEEEEECCCCc
Confidence 99999877543
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.1e-33 Score=243.77 Aligned_cols=205 Identities=15% Similarity=0.213 Sum_probs=173.6
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
+.++|+|++|+|+|++||+|+.||.|+|||..+ .....+..+.+|.+.|++++|+|++++|++|
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~----------------~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~ 69 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSG----------------NKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEET----------------TEEEEEEEEECCSSCEEEEEEETTTTEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCC----------------CCEEEEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 457899999999999999999999999999853 1234567789999999999999999999999
Q ss_pred eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------------
Q psy15157 198 SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------------- 250 (344)
Q Consensus 198 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------------- 250 (344)
+.|++|++||+.++..........+...|.+++|+|+++++++|+.++.+++|
T Consensus 70 s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 149 (371)
T d1k8kc_ 70 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 149 (371)
T ss_dssp ETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred ECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccc
Confidence 99999999999887655555556677889999999999999999999999987
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCe------------------EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEE
Q psy15157 251 SSDGRIYCSGSKDGDIKIWDGVSSK------------------CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKL 312 (344)
Q Consensus 251 ~~~~~~l~~~~~dg~i~iwd~~~~~------------------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~v 312 (344)
+|++.+|++|+.|+.|++||..... ...... .|. ..|.+++|+|++++|++++.|+.|++
T Consensus 150 ~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~v~~~~~s~~g~~l~s~~~d~~i~i 227 (371)
T d1k8kc_ 150 HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSC-GWVHGVCFSANGSRVAWVSHDSTVCL 227 (371)
T ss_dssp CTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCS-SCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred cccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeecc-Ccc-CcEEEEEeecccccccccccCCcceE
Confidence 6899999999999999999976432 222222 333 46999999999999999999999999
Q ss_pred EEcCCCeeEEEeecCCCcCceeeeeeeccC
Q psy15157 313 WELSSARCLIAYTGAGSMGQQFELTLTVDA 342 (344)
Q Consensus 313 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (344)
||+.+++.+..+.+|..... ++.|++|+
T Consensus 228 wd~~~~~~~~~~~~~~~~v~--s~~fs~d~ 255 (371)
T d1k8kc_ 228 ADADKKMAVATLASETLPLL--AVTFITES 255 (371)
T ss_dssp EEGGGTTEEEEEECSSCCEE--EEEEEETT
T ss_pred Eeeecccceeeeecccccce--eeeecCCC
Confidence 99999999999998876543 44455554
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.3e-32 Score=228.65 Aligned_cols=227 Identities=25% Similarity=0.416 Sum_probs=186.1
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC------------------------CcCCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE------------------------PQNDQ 166 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~------------------------~~~~~ 166 (344)
+...|.||+++|++++|+|++++||||+.||+|+|||+.++.......... .....
T Consensus 9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (317)
T d1vyhc1 9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 88 (317)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccc
Confidence 345789999999999999999999999999999999998654332221100 11122
Q ss_pred CCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCE
Q psy15157 167 QGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV 246 (344)
Q Consensus 167 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 246 (344)
........+.+|...+.++.|++++..+++++.|+.+++||+++++....+ ..+...+.+++|+|++.++++++.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~ 166 (317)
T d1vyhc1 89 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWVRMVRPNQDGTLIASCSNDQT 166 (317)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEE--ccCCCcceeeecccCCCEEEEEeCCCe
Confidence 334556667788999999999999999999999999999999988654433 457788999999999999999999999
Q ss_pred EEEE-------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc
Q psy15157 247 LRLY-------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA 283 (344)
Q Consensus 247 i~~~-------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 283 (344)
+++| ...+.++++++.|+.|++||.++++++..+..
T Consensus 167 v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~- 245 (317)
T d1vyhc1 167 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG- 245 (317)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC-
T ss_pred EEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeC-
Confidence 9998 23456789999999999999999999998874
Q ss_pred CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 284 ~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
|. ..|.+++|+|++++|++|+.||.|++||+++++++.++.+|.... .++.++++++
T Consensus 246 ~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V--~~~~~s~~~~ 302 (317)
T d1vyhc1 246 HD-NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV--TSLDFHKTAP 302 (317)
T ss_dssp CS-SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCE--EEEEECSSSS
T ss_pred CC-CCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCE--EEEEEcCCCC
Confidence 44 479999999999999999999999999999999999999987654 4455666654
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=7.2e-31 Score=225.72 Aligned_cols=214 Identities=19% Similarity=0.240 Sum_probs=179.6
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
....+|.||.+.|++++|+|++++||||+.||+|+|||+.+ ...+..+..|...|.+++|+|
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~------------------~~~~~~~~~~~~~v~~v~~~~ 107 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT------------------TNKVHAIPLRSSWVMTCAYAP 107 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT------------------TEEEEEEECSCSCEEEEEECT
T ss_pred eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeeccc------------------ceeEEEEecccccEEeeEeec
Confidence 34567899999999999999999999999999999999854 456778889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCccccce-------------------------------------------eeeccccce
Q psy15157 190 SAPILASGSKDKTVKMFDYSKSSVRKAH-------------------------------------------KTIQESTFV 226 (344)
Q Consensus 190 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------------------------------------------~~~~~~~~v 226 (344)
++.++++|+.|+.+++|+.......... ........+
T Consensus 108 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (340)
T d1tbga_ 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187 (340)
T ss_dssp TSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCE
T ss_pred cceeeeeecccceeecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeE
Confidence 9999999999999999996553211100 011123456
Q ss_pred EEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeeccc
Q psy15157 227 RCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKA 283 (344)
Q Consensus 227 ~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 283 (344)
....+.+.+.++++++.++.+++| +|++.+|++|+.||.|++||++.......+...
T Consensus 188 ~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~ 267 (340)
T d1tbga_ 188 MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD 267 (340)
T ss_dssp EEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred eeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccc
Confidence 778888899999999999999998 688999999999999999999999888776544
Q ss_pred CCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 284 HDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 284 ~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.....|.+++|+|++++|++|+.||.|++||+.+++++.++.+|.... .++.+++++.
T Consensus 268 ~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V--~~l~~s~d~~ 325 (340)
T d1tbga_ 268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV--SCLGVTDDGM 325 (340)
T ss_dssp TCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEEECTTSS
T ss_pred cccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCE--EEEEEeCCCC
Confidence 444579999999999999999999999999999999999999987654 4455666654
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-31 Score=227.12 Aligned_cols=209 Identities=16% Similarity=0.255 Sum_probs=155.4
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+|...|+|++|+|+|++||||+ ||.|+|||+.+... ..........+|.+.|.+++|+|++++|
T Consensus 47 ~~~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~-------------~~~~~~~~~~~h~~~I~~v~~s~dg~~l 112 (337)
T d1gxra_ 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN-------------KSPVSQLDCLNRDNYIRSCKLLPDGCTL 112 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC-------------CSCSEEEECSCTTSBEEEEEECTTSSEE
T ss_pred ECCCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcc-------------cceeEEeeecCCCCcEEEEEEcCCCCEE
Confidence 348999999999999999999997 89999999964311 1122344567899999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeecccc------------------------------------------ceEEEEEe
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQEST------------------------------------------FVRCLSFH 232 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------------------------------------------~v~~~~~~ 232 (344)
++|+.||.|++||+.............+.. .+.+++|+
T Consensus 113 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s 192 (337)
T d1gxra_ 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp EEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999987543222222222333 44555555
Q ss_pred cCCCEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE
Q psy15157 233 PCGDYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290 (344)
Q Consensus 233 ~~~~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 290 (344)
+++..+++++.++.+++| +|++.++++|+.|+.|++||+++++..... .|. ..|+
T Consensus 193 ~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~-~~i~ 269 (337)
T d1gxra_ 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH--LHE-SCVL 269 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEEC--CCS-SCEE
T ss_pred ccccccccccccccccccccccceeecccccccceEEEEEcccccccceecccccccccccccccccccc--ccc-cccc
Confidence 555555555555555554 577888888888888888888877765433 343 4699
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 291 SLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 291 ~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
+++|+|++++|++++.||.|++||+.+++.+..+.+.. ...++.+++++.
T Consensus 270 ~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~---~v~~~~~s~d~~ 319 (337)
T d1gxra_ 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS---SVLSCDISVDDK 319 (337)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS---CEEEEEECTTSC
T ss_pred eEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCC---CEEEEEEeCCCC
Confidence 99999999999999999999999999999998876543 345566666654
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.2e-31 Score=233.87 Aligned_cols=217 Identities=22% Similarity=0.340 Sum_probs=155.2
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
..+|++.|+|++|+|+|++||+|+ |++|+|||+.++..........................|...|++++|+|++++|
T Consensus 58 ~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 136 (388)
T d1erja_ 58 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 136 (388)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred eCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcc
Confidence 347999999999999999999987 8999999998754433322111111111112223445788899999999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------ 250 (344)
++|+.||.|++||...++.... ...|...|.++.+++++..+++++.++.+++|
T Consensus 137 ~s~~~dg~v~i~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
T d1erja_ 137 ATGAEDRLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP 214 (388)
T ss_dssp EEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred eecccccccccccccccccccc--cccccccccccccccccccccccccceeeeeeeccccccccccccccccccccccC
Confidence 9999999999999988754332 34466677777777777777777777777776
Q ss_pred ------------------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeee--
Q psy15157 251 ------------------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATF-- 280 (344)
Q Consensus 251 ------------------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-- 280 (344)
++++.+|++|+.||.|++||++++......
T Consensus 215 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 294 (388)
T d1erja_ 215 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 294 (388)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccccccc
Confidence 467777888888888888887655432111
Q ss_pred ---------cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceee
Q psy15157 281 ---------SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 281 ---------~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 335 (344)
...|. ..|.+++|+|++++|++|+.||.|++||+++++++.++++|......+.
T Consensus 295 ~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~ 357 (388)
T d1erja_ 295 PNSGTCEVTYIGHK-DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA 357 (388)
T ss_dssp ----CEEEEEECCS-SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred ccccceeeeccccc-ceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEE
Confidence 11233 4699999999999999999999999999999999999999977655443
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=2.3e-30 Score=223.66 Aligned_cols=234 Identities=15% Similarity=0.255 Sum_probs=180.3
Q ss_pred CCCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccc-
Q psy15157 75 EPSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLA- 153 (344)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~- 153 (344)
+.++.++|....+++++.......+.... ............+|.+.|++++|+|++++|++|+.||.|++||+.....
T Consensus 54 V~~v~fs~~g~~latg~dg~V~iWd~~~~-~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~ 132 (337)
T d1gxra_ 54 VCAVTISNPTRHVYTGGKGCVKVWDISHP-GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR 132 (337)
T ss_dssp CCEEEECSSSSEEEEECBSEEEEEETTST-TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E
T ss_pred EEEEEECCCCCEEEEEECCEEEEEEccCC-cccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccc
Confidence 44556777777666655332222222211 1122233344568999999999999999999999999999999864211
Q ss_pred -cccC------------CCC------------CCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 154 -KSSM------------ESS------------EPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 154 -~~~~------------~~~------------~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
.... ... ....+............|...|.+++|++++..+++|+.||.|++||+
T Consensus 133 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~ 212 (337)
T d1gxra_ 133 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0000 000 011223445667778889999999999999999999999999999999
Q ss_pred CCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------cCCCCEEEEEeCCCcE
Q psy15157 209 SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------SSDGRIYCSGSKDGDI 266 (344)
Q Consensus 209 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------~~~~~~l~~~~~dg~i 266 (344)
++++... ...+...|.+++|+|+++++++++.++.+++| +|++++|++|+.||.|
T Consensus 213 ~~~~~~~---~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i 289 (337)
T d1gxra_ 213 REGRQLQ---QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL 289 (337)
T ss_dssp TTTEEEE---EEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ccceeec---ccccccceEEEEEcccccccceeccccccccccccccccccccccccccceEEECCCCCEEEEEeCCCeE
Confidence 9876433 34567889999999999999999999999998 7899999999999999
Q ss_pred EEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 267 KIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 267 ~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
++||..+++.+..+. |. ..|.+++|+|++++|++|+.||+|+|||+
T Consensus 290 ~iwd~~~~~~~~~~~--~~-~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 290 NAWRTPYGASIFQSK--ES-SSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEETTTCCEEEEEE--CS-SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEECCCCCEEEEcc--CC-CCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 999999999887764 33 46999999999999999999999999997
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=4.3e-29 Score=211.54 Aligned_cols=194 Identities=15% Similarity=0.208 Sum_probs=154.1
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~ 190 (344)
..++.||.+.|++++|+|++++|+||+.||+|++||+.+ ......+ ..|...|++++|+|+
T Consensus 5 ~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~------------------~~~~~~~~~~h~~~v~~v~~~~~ 66 (299)
T d1nr0a2 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST------------------GISNRVFPDVHATMITGIKTTSK 66 (299)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------------CCEEECSSCSCSSCEEEEEECTT
T ss_pred ceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCC------------------CcEEEEEcCCCCCcEEEEEeecc
Confidence 456899999999999999999999999999999999964 2334444 468999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccce--------------------------------------eeeccccceEEEEEe
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAH--------------------------------------KTIQESTFVRCLSFH 232 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------------------------~~~~~~~~v~~~~~~ 232 (344)
+. +++++.|+.+++|+.......... ........+.+++|+
T Consensus 67 g~-~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s 145 (299)
T d1nr0a2 67 GD-LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALS 145 (299)
T ss_dssp SC-EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEEC
T ss_pred ce-eecccceeeEEEeccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 86 556678999999997543210000 000112346788999
Q ss_pred cCCCEEEEEeCCCEEEEE------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeec--ccCCC
Q psy15157 233 PCGDYMVVGTDHFVLRLY------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFS--KAHDG 286 (344)
Q Consensus 233 ~~~~~l~~~~~~~~i~~~------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~ 286 (344)
|+++++++|+.++.+.+| ++++.++++++.|+.|++||+.++....... ..|.
T Consensus 146 ~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~- 224 (299)
T d1nr0a2 146 NDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHT- 224 (299)
T ss_dssp TTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 999999999999999998 7889999999999999999998876654432 1333
Q ss_pred ccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 287 AEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 287 ~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
..|++++|+|++++|++|+.||.|++||++++.....+.
T Consensus 225 ~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 263 (299)
T d1nr0a2 225 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIII 263 (299)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEE
T ss_pred cccccccccccccceEEEcCCCEEEEEECCCCCcceEEE
Confidence 579999999999999999999999999999876544433
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3.5e-29 Score=215.21 Aligned_cols=240 Identities=13% Similarity=0.172 Sum_probs=176.0
Q ss_pred CCCCCccchhcccCCCceeeecCCCCCCCCCCCccceeEEecC-CCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCcc
Q psy15157 76 PSIGLNPIQEILIGPGLDLEFESDVDPSAPEPAQYETAYVTSH-KSPCRAGAFSI--DGQLCATGSVDASIKILDVDRML 152 (344)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~s~--~~~~l~sg~~dg~v~iwd~~~~~ 152 (344)
..+.++|....++.+..+..+........ ........+.+| ...|++++|+| ++++|++|+.||+|+|||+....
T Consensus 21 t~l~~~~~~~~la~~~~~~~~i~~~~~~~--~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~ 98 (325)
T d1pgua1 21 THLSYDPTTNAIAYPCGKSAFVRCLDDGD--SKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK 98 (325)
T ss_dssp CCCEEETTTTEEEEEETTEEEEEECCSSC--CSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEEeCCC--CCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence 34566666666655432222221111111 122234456777 46899999998 67899999999999999996532
Q ss_pred ccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCccccceeeeccccceEEEE
Q psy15157 153 AKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK--DKTVKMFDYSKSSVRKAHKTIQESTFVRCLS 230 (344)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 230 (344)
.... ........+..|.++|.+++|+++++.+++++. ++.+++|+..+++....+ ..|...|.+++
T Consensus 99 ~~~~----------~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~ 166 (325)
T d1pgua1 99 ESNS----------VEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEV--SGHSQRINACH 166 (325)
T ss_dssp GGTE----------EEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEEC--CSCSSCEEEEE
T ss_pred ceee----------eecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceee--eeccccccccc
Confidence 2211 011223345678999999999999998887764 678999999887654433 45788899999
Q ss_pred EecCCCE-EEEEeCCCEEEEE--------------------------cCC-CCEEEEEeCCCcEEEEeCCCCeEEeeecc
Q psy15157 231 FHPCGDY-MVVGTDHFVLRLY--------------------------SSD-GRIYCSGSKDGDIKIWDGVSSKCVATFSK 282 (344)
Q Consensus 231 ~~~~~~~-l~~~~~~~~i~~~--------------------------~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 282 (344)
|+|++.+ +++++.|+.+++| +|+ +.++++++.|+.|++||+++++.+..+..
T Consensus 167 ~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~ 246 (325)
T d1pgua1 167 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED 246 (325)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred ccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccc
Confidence 9999876 6678999999998 564 68999999999999999999999988863
Q ss_pred cCCCccEEEEEEc---cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcC
Q psy15157 283 AHDGAEISSLTFT---RNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMG 331 (344)
Q Consensus 283 ~~~~~~v~~i~~~---~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 331 (344)
|. ..+.++.|+ |+|++|++++.|+.|+|||+++++++..+..+....
T Consensus 247 -~~-~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 296 (325)
T d1pgua1 247 -DQ-EPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL 296 (325)
T ss_dssp -TT-BCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG
T ss_pred -cc-cccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcc
Confidence 33 234444443 589999999999999999999999999998776543
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=3.7e-28 Score=207.39 Aligned_cols=206 Identities=17% Similarity=0.214 Sum_probs=169.5
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
.+++.+.+++++|+|+.|+.++ ++.|.+||+++ ......+.+|...|++++|+|++++|++
T Consensus 15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~------------------~~~~~~~~~H~~~v~~~~~sp~g~~lat 75 (311)
T d1nr0a1 15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGS------------------LTDTEIYTEHSHQTTVAKTSPSGYYCAS 75 (311)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTC------------------SSCCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCC------------------CceeEEEcCCCCCEEEEEEeCCCCeEec
Confidence 4556778899999999999985 67799999964 3445567899999999999999999999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC--CEEEEE-----------------------c
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH--FVLRLY-----------------------S 251 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~i~~~-----------------------~ 251 (344)
|+.||+|++||+.++..........|...|.+++|+|+++++++++.+ ..+++| +
T Consensus 76 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~ 155 (311)
T d1nr0a1 76 GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFK 155 (311)
T ss_dssp EETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEEC
T ss_pred cccCceEeeeeeeccccccccccccccCcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999987655444455678899999999999999998754 446665 6
Q ss_pred CCCCE-EEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC--
Q psy15157 252 SDGRI-YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG-- 328 (344)
Q Consensus 252 ~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-- 328 (344)
|++.+ +++|+.|+.|++||+++++....+. .|. ..|+++.|+|++++|++++.|+.|++||+++++.+..+....
T Consensus 156 ~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~-~~~-~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~ 233 (311)
T d1nr0a1 156 PSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-EHT-KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233 (311)
T ss_dssp SSSSCEEEEEETTSCEEEEETTTBEEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSS
T ss_pred ccceeeecccccccccccccccccccccccc-ccc-ccccccccCccccccccccccccccccccccccccccccccccc
Confidence 77774 8889999999999999999888876 343 479999999999999999999999999999999888876431
Q ss_pred ---CcCceeeeeeeccCC
Q psy15157 329 ---SMGQQFELTLTVDAD 343 (344)
Q Consensus 329 ---~~~~~~~~~~~~~~~ 343 (344)
......++.+++++.
T Consensus 234 ~~~h~~~V~~~~~s~~~~ 251 (311)
T d1nr0a1 234 NVAHSGSVFGLTWSPDGT 251 (311)
T ss_dssp SCSSSSCEEEEEECTTSS
T ss_pred cccccccccccccCCCCC
Confidence 223455666666653
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=8.6e-29 Score=216.61 Aligned_cols=195 Identities=16% Similarity=0.244 Sum_probs=161.4
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.+|.++|++++|+|++++|++|+.|++|+|||+.+ ........+.+|...|.+++|+|+
T Consensus 43 ~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~----------------~~~~~~~~~~~~~~~v~~i~~~p~ 106 (371)
T d1k8kc_ 43 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG----------------RTWKPTLVILRINRAARCVRWAPN 106 (371)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET----------------TEEEEEEECCCCSSCEEEEEECTT
T ss_pred EEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecc----------------cccccccccccccccccccccccc
Confidence 4566789999999999999999999999999999999863 223345667789999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcccccee--eeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHK--TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------ 250 (344)
++.|++|+.|++|++|++.......... ...+...|.+++|+|++.+|++|+.|+.+++|
T Consensus 107 ~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~ 186 (371)
T d1k8kc_ 107 EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS 186 (371)
T ss_dssp SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBS
T ss_pred cccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccc
Confidence 9999999999999999988765432222 23466789999999999999999999999998
Q ss_pred -----------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 251 -----------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 251 -----------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
+|+|+++++++.|+.|++||+.+++.+..+.. |. .+|.+++|+|++++|++|. |
T Consensus 187 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~-~~v~s~~fs~d~~~la~g~-d 263 (371)
T d1k8kc_ 187 KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS-ET-LPLLAVTFITESSLVAAGH-D 263 (371)
T ss_dssp CCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-SS-CCEEEEEEEETTEEEEEET-T
T ss_pred cccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeec-cc-ccceeeeecCCCCEEEEEc-C
Confidence 57899999999999999999999999888864 43 4799999999998777655 7
Q ss_pred CcEEEEEcCCCeeEEEe
Q psy15157 308 SLVKLWELSSARCLIAY 324 (344)
Q Consensus 308 g~i~vwd~~~~~~~~~~ 324 (344)
+.+++|..........+
T Consensus 264 ~~~~~~~~~~~~~~~~~ 280 (371)
T d1k8kc_ 264 CFPVLFTYDSAAGKLSF 280 (371)
T ss_dssp SSCEEEEEETTTTEEEE
T ss_pred CceEEEEeeCCCceEEE
Confidence 77777766554433333
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=6.4e-28 Score=207.10 Aligned_cols=229 Identities=20% Similarity=0.355 Sum_probs=177.5
Q ss_pred CCCCCccchhcccCCCceeee-cCCCCCCCCCCCccceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCcccc
Q psy15157 76 PSIGLNPIQEILIGPGLDLEF-ESDVDPSAPEPAQYETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAK 154 (344)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~ 154 (344)
.++.++|....+++++.+-.. ..+.. .......+.+|...|++++|+|+++++++|+.|+.+++|+.......
T Consensus 59 ~~l~~s~~~~~l~sgs~Dg~v~iWd~~------~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~ 132 (340)
T d1tbga_ 59 YAMHWGTDSRLLVSASQDGKLIIWDSY------TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp EEEEECTTSSEEEEEETTTEEEEEETT------TTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSC
T ss_pred EEEEECCCCCEEEEEECCCceeeeecc------cceeEEEEecccccEEeeEeeccceeeeeecccceeecccccccccc
Confidence 345666766667666544211 11111 12335567899999999999999999999999999999998643221
Q ss_pred ccC----CCCC-----------------------CcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy15157 155 SSM----ESSE-----------------------PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFD 207 (344)
Q Consensus 155 ~~~----~~~~-----------------------~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 207 (344)
... .... ................+...+....+.+.+.++++|+.|+.|++||
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d 212 (340)
T d1tbga_ 133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212 (340)
T ss_dssp CCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEE
Confidence 110 0000 0011122333445556778899999999999999999999999999
Q ss_pred cCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-------------------------cCCCCEEEEEeC
Q psy15157 208 YSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------------SSDGRIYCSGSK 262 (344)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------------~~~~~~l~~~~~ 262 (344)
+++++....+ ..|...|++++|+|++++|++|+.|+.+++| ++++++|++|+.
T Consensus 213 ~~~~~~~~~~--~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~ 290 (340)
T d1tbga_ 213 VREGMCRQTF--TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp TTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEET
T ss_pred CCCCcEEEEE--eCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEEC
Confidence 9988655433 4578899999999999999999999999998 688999999999
Q ss_pred CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy15157 263 DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 263 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd 314 (344)
||.|++||+.+++++..+. +|. .+|++++|+|++++|++|+.||.|+|||
T Consensus 291 dg~i~iwd~~~~~~~~~~~-~H~-~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 291 DFNCNVWDALKADRAGVLA-GHD-NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSCEEEEETTTCCEEEEEC-CCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEECCCCcEEEEEc-CCC-CCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 9999999999999999887 454 4799999999999999999999999997
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.3e-27 Score=204.28 Aligned_cols=201 Identities=22% Similarity=0.365 Sum_probs=170.7
Q ss_pred eeEEecCCCce-EEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 112 TAYVTSHKSPC-RAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 112 ~~~~~~h~~~v-~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
..+|.||.+.| +|++| ++++||||+.||+|+|||+.+ .+.+.++.+|.+.|++++|+|+
T Consensus 5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~------------------~~~~~~l~~H~~~V~~l~~s~~ 64 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN------------------KKFLLQLSGHDGGVWALKYAHG 64 (355)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTT------------------TEEEEEEECCSSCEEEEEEETT
T ss_pred cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCC------------------CcEEEEEECCCCCEEEEEEcCC
Confidence 45689998886 66666 588999999999999999853 5678889999999999999985
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------------- 250 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------------- 250 (344)
.+|++|+.||+|++|++...+..................+.+++.++++++.|+.+++|
T Consensus 65 -~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 143 (355)
T d1nexb2 65 -GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 143 (355)
T ss_dssp -TEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEE
T ss_pred -CEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccc
Confidence 58999999999999999887655444444445556677888999999999999999998
Q ss_pred ------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC
Q psy15157 251 ------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 251 ------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
.+++.+++++..|+.|++||+.+++.+....... ..+.++.|+|++.++++++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 221 (355)
T d1nexb2 144 FHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT--DRIYSTIYDHERKRCISASM 221 (355)
T ss_dssp ESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEEETTTTEEEEEET
T ss_pred eeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeeccc--cccccccccccceeeecccc
Confidence 2457889999999999999999999888776433 35899999999999999999
Q ss_pred CCcEEEEEcCCCeeEEEeecCCCcCceee
Q psy15157 307 DSLVKLWELSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 307 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 335 (344)
|+.|++||++++.++..+.+|......+.
T Consensus 222 d~~i~i~d~~~~~~~~~~~~h~~~v~~~~ 250 (355)
T d1nexb2 222 DTTIRIWDLENGELMYTLQGHTALVGLLR 250 (355)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCCCEEE
T ss_pred cceEEeeeccccccccccccccccccccc
Confidence 99999999999999999999987765544
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.2e-27 Score=204.67 Aligned_cols=200 Identities=12% Similarity=0.144 Sum_probs=141.0
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC-
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA- 191 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~- 191 (344)
..+.+|++.|++|+|+|++++||+|+.||+|+|||+++. .....+....+|.++|.+++|+|++
T Consensus 5 ~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~---------------~~~~~~~~~~~h~~~V~~v~f~~~~~ 69 (342)
T d1yfqa_ 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ---------------AKNVDLLQSLRYKHPLLCCNFIDNTD 69 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETT---------------TTEEEEEEEEECSSCEEEEEEEESSS
T ss_pred EcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCC---------------CcceEEEEecCCCCCEEEEEEeCCCC
Confidence 456799999999999999999999999999999998642 1112234445799999999999875
Q ss_pred CEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY--------------------- 250 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~--------------------- 250 (344)
.+|++|+.||.|++|++.......... ..+........+.+++..+++++.++.+++|
T Consensus 70 ~~l~sg~~d~~v~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T d1yfqa_ 70 LQIYVGTVQGEILKVDLIGSPSFQALT-NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp EEEEEEETTSCEEEECSSSSSSEEECB-SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred CEEEEcccccceeeeeccccccccccc-ccccccccccccccccccccccccccccceeeccccccceeeeccccccccc
Confidence 489999999999999998765433222 1222233344455566666666777777666
Q ss_pred --------cCCCCEEEEEeCCCcEEEEeCCCCeE----------------------------------------------
Q psy15157 251 --------SSDGRIYCSGSKDGDIKIWDGVSSKC---------------------------------------------- 276 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg~i~iwd~~~~~~---------------------------------------------- 276 (344)
.+.+..+++++.|+.|++||+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~ 228 (342)
T d1yfqa_ 149 VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred ceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcc
Confidence 23444555666666666666433211
Q ss_pred Ee---------eec----ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 277 VA---------TFS----KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 277 ~~---------~~~----~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.. ... ...+...|++++|+|++++|++|+.||.|++||+.+++.+..+..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~ 293 (342)
T d1yfqa_ 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN 293 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS
T ss_pred eeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 00 000 00112358899999999999999999999999999999999887543
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=3.4e-27 Score=206.84 Aligned_cols=183 Identities=22% Similarity=0.372 Sum_probs=139.7
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC----
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP---- 189 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---- 189 (344)
...+|...|++++|+|++++|++|+.||.|++||...+.. ...+.+|...|.+++|++
T Consensus 116 ~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~------------------~~~~~~h~~~v~~~~~~~~~~~ 177 (388)
T d1erja_ 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI------------------VMILQGHEQDIYSLDYFPSGDK 177 (388)
T ss_dssp ---CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------------EEEECCCSSCEEEEEECTTSSE
T ss_pred cccCCCCCEEEEEECCCCCcceeccccccccccccccccc------------------cccccccccccccccccccccc
Confidence 3457899999999999999999999999999999865432 233333333443333333
Q ss_pred --------------------------------------CCCEEEEEeCCCcEEEEEcCCCcccccee-----eeccccce
Q psy15157 190 --------------------------------------SAPILASGSKDKTVKMFDYSKSSVRKAHK-----TIQESTFV 226 (344)
Q Consensus 190 --------------------------------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~v 226 (344)
++.+|++|+.||.|++||+.++.....+. ...|...|
T Consensus 178 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v 257 (388)
T d1erja_ 178 LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 257 (388)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE
T ss_pred ccccccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCE
Confidence 44566666666666666666554332221 12356779
Q ss_pred EEEEEecCCCEEEEEeCCCEEEEE-----------------------------------cCCCCEEEEEeCCCcEEEEeC
Q psy15157 227 RCLSFHPCGDYMVVGTDHFVLRLY-----------------------------------SSDGRIYCSGSKDGDIKIWDG 271 (344)
Q Consensus 227 ~~~~~~~~~~~l~~~~~~~~i~~~-----------------------------------~~~~~~l~~~~~dg~i~iwd~ 271 (344)
.+++|+|++++|++++.|+.+++| ++++++|++|+.||.|++||+
T Consensus 258 ~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~ 337 (388)
T d1erja_ 258 YSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 337 (388)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 999999999999999999999998 567899999999999999999
Q ss_pred CCCeEEeeecccCCCccEEEEEE------ccCCCEEEEEeCCCcEEEEEcC
Q psy15157 272 VSSKCVATFSKAHDGAEISSLTF------TRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 272 ~~~~~~~~~~~~~~~~~v~~i~~------~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
++++++..+. .|. ..|.++++ +|++++|+||+.||+|+||+++
T Consensus 338 ~~~~~~~~l~-~H~-~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 338 KSGNPLLMLQ-GHR-NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp TTCCEEEEEE-CCS-SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCcEEEEEe-CCC-CCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 9999999987 454 46898875 6789999999999999999984
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.5e-26 Score=198.05 Aligned_cols=207 Identities=22% Similarity=0.374 Sum_probs=155.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
...+|.||.+.|.+ +++++|++||||+.||+|+|||+.+ .+++.++.+|.+.|.+++|+|+
T Consensus 8 ~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~------------------~~~~~~~~~h~~~V~~v~~~~~ 68 (342)
T d2ovrb2 8 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT------------------GKCLRTLVGHTGGVWSSQMRDN 68 (342)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTT------------------CCEEEECCCCSSCEEEEEEETT
T ss_pred cCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCC------------------CCEEEEEeCCCCCEEEEEeCCC
Confidence 34578999999865 3566799999999999999999853 5678889999999999999875
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccce-----------------------------------------------------
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKAH----------------------------------------------------- 217 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~~----------------------------------------------------- 217 (344)
+|++|+.|+.+++|+..........
T Consensus 69 --~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (342)
T d2ovrb2 69 --IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 146 (342)
T ss_dssp --EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC
T ss_pred --ccccceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccc
Confidence 8999999999999996543110000
Q ss_pred -------------------------eeeccccceEEEEEecCCCEEEEEeCCCEEEEE---------------------c
Q psy15157 218 -------------------------KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------S 251 (344)
Q Consensus 218 -------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------~ 251 (344)
....+ ......+.+++.++++|+.|+.+++| +
T Consensus 147 ~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~ 224 (342)
T d2ovrb2 147 GRRVVSGAYDFMVKVWDPETETCLHTLQGH--TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 224 (342)
T ss_dssp SSCEEEEETTSCEEEEEGGGTEEEEEECCC--SSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE
T ss_pred cceeeeecCCCeEEEeecccceeeEEEcCc--ccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEe
Confidence 00001 12234455678899999999999998 4
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC-CCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC--
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH-DGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG-- 328 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-- 328 (344)
++++++++|+.|+.|++||....+....+.... +...+.++.+ +++++++|+.||.|++||++++++++++....
T Consensus 225 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~ 302 (342)
T d2ovrb2 225 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 302 (342)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTG
T ss_pred cCCCEEEEEcCCCEEEEEecccccccccccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEEEEEecccCC
Confidence 567899999999999999999888777665322 1234666666 56799999999999999999999999886422
Q ss_pred -CcCceeeeeeeccC
Q psy15157 329 -SMGQQFELTLTVDA 342 (344)
Q Consensus 329 -~~~~~~~~~~~~~~ 342 (344)
..+...++.+++++
T Consensus 303 ~~~~~v~~v~~s~~~ 317 (342)
T d2ovrb2 303 GSGGVVWRIRASNTK 317 (342)
T ss_dssp GGTCEEEEEEECSSE
T ss_pred CCCCCEEEEEECCCC
Confidence 22334555565553
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=1.3e-25 Score=189.97 Aligned_cols=180 Identities=23% Similarity=0.476 Sum_probs=157.7
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
..+.+|...+.++.|+++++.+++++.|+.+++||+.+ ......+.+|...+.+++|++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 156 (317)
T d1vyhc1 95 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT------------------GYCVKTFTGHREWVRMVRPNQDGT 156 (317)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT------------------CCEEEEEECCSSCEEEEEECTTSS
T ss_pred cccccccccceeeeccCCCceEEeeccCcceeEeeccc------------------ceeeeEEccCCCcceeeecccCCC
Confidence 34568899999999999999999999999999999853 456778889999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecC--------------------CCEEEEEeCCCEEEEE--
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPC--------------------GDYMVVGTDHFVLRLY-- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~~~~i~~~-- 250 (344)
+|++++.|+.|++|++.+++....+ ..+...+.++.|+|+ +.++++++.|+.+++|
T Consensus 157 ~l~~~~~d~~v~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 234 (317)
T d1vyhc1 157 LIASCSNDQTVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 234 (317)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEET
T ss_pred EEEEEeCCCeEEEEeeccceeeEEE--ecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEEC
Confidence 9999999999999999987654333 346677888888775 3478899999999987
Q ss_pred ---------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCc
Q psy15157 251 ---------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSL 309 (344)
Q Consensus 251 ---------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~ 309 (344)
+|++++|++|+.||.|++||+.+++++..+. .|. ..|++++|+|++++|++|+.||+
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~h~-~~V~~~~~s~~~~~l~s~s~Dg~ 312 (317)
T d1vyhc1 235 STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHE-HFVTSLDFHKTAPYVVTGSVDQT 312 (317)
T ss_dssp TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE-CCS-SCEEEEEECSSSSCEEEEETTSE
T ss_pred CCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEc-CCC-CCEEEEEEcCCCCEEEEEeCCCe
Confidence 6889999999999999999999999998887 454 47999999999999999999999
Q ss_pred EEEEE
Q psy15157 310 VKLWE 314 (344)
Q Consensus 310 i~vwd 314 (344)
|++||
T Consensus 313 i~iWd 317 (317)
T d1vyhc1 313 VKVWE 317 (317)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=5e-26 Score=200.45 Aligned_cols=195 Identities=15% Similarity=0.216 Sum_probs=141.6
Q ss_pred cCCCceEEEEECCC-----CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSID-----GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~-----~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
.+...+..++|.++ +.++++++.||++++|++.............................+...+.+++|+|++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg 196 (393)
T d1sq9a_ 117 MKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG 196 (393)
T ss_dssp GGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS
T ss_pred cCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC
Confidence 35566788888764 4689999999999999985321111000000000000011122234456678999999997
Q ss_pred CEEEEEeCCCcEEEEEcCCCcccccee----eeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC---
Q psy15157 192 PILASGSKDKTVKMFDYSKSSVRKAHK----TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG--- 264 (344)
Q Consensus 192 ~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg--- 264 (344)
+|++|+.||+|++||+.+++....+. ...|...|++++|+|+|++|+ +|+.|+
T Consensus 197 -~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~-------------------sgs~D~t~~ 256 (393)
T d1sq9a_ 197 -LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA-------------------IAHDSNSFG 256 (393)
T ss_dssp -EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEE-------------------EEEEETTEE
T ss_pred -EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceee-------------------eecCCCCcc
Confidence 89999999999999999876544332 234778999999999766666 566665
Q ss_pred cEEEEeCCCCeEEeeec------------ccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCc
Q psy15157 265 DIKIWDGVSSKCVATFS------------KAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQ 332 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~------------~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 332 (344)
.|++||+.+++.+..+. .+|. ..|++++|+|++++|+|||.|++|++||+++|+++.++++|.....
T Consensus 257 ~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~-~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~ 335 (393)
T d1sq9a_ 257 CITLYETEFGERIGSLSVPTHSSQASLGEFAHS-SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE 335 (393)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBS-SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS
T ss_pred eeeecccccceeeeeeccccccccceeeeeccc-CceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCccc
Confidence 48999999988877664 1354 4699999999999999999999999999999999999999976554
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=8e-25 Score=187.71 Aligned_cols=183 Identities=17% Similarity=0.290 Sum_probs=149.1
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeC--CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSV--DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
.+..|.++|.+++|+++++++++++. ++.+++|+.++ ...+..+.+|...|++++|+|++
T Consensus 110 ~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~h~~~v~~~~~~~~~ 171 (325)
T d1pgua1 110 EFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS------------------GNSLGEVSGHSQRINACHLKQSR 171 (325)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT------------------CCEEEECCSCSSCEEEEEECSSS
T ss_pred ccccccCcEEEEEECCCCCccceeeccccceEEEEeecc------------------cccceeeeecccccccccccccc
Confidence 34678999999999999999887764 67899999853 45678889999999999999988
Q ss_pred C-EEEEEeCCCcEEEEEcCCCccccceee-eccccceEEEEEecC-CCEEEEEeCCCEEEEE------------------
Q psy15157 192 P-ILASGSKDKTVKMFDYSKSSVRKAHKT-IQESTFVRCLSFHPC-GDYMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 192 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~l~~~~~~~~i~~~------------------ 250 (344)
. ++++++.|+.|++||+...+....... ..+...|.+++|+|+ +.++++++.|+.|++|
T Consensus 172 ~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v 251 (325)
T d1pgua1 172 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV 251 (325)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC
T ss_pred cceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccccccccccccccc
Confidence 7 578899999999999987654333322 345678999999996 6889999999999999
Q ss_pred --------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE--EEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 251 --------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS--SLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 251 --------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~--~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
.++|++|++++.|+.|+|||+++++++..+..+.+...+. ++.|.++ .+|++++.||.|++||+
T Consensus 252 ~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 252 QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN-GRIISLSLDGTLNFYEL 325 (325)
T ss_dssp CSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEET-TEEEEEETTSCEEEEET
T ss_pred ccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCC-CEEEEEECCCEEEEEEC
Confidence 2688999999999999999999999988876444333333 4444443 47899999999999996
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=3.5e-24 Score=179.93 Aligned_cols=194 Identities=14% Similarity=0.171 Sum_probs=147.2
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
....+.||.++|++++|+| |+||+.||+|++||+.+ ...+|...|.+++++++
T Consensus 5 ~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~-----------------------~~~~h~~~V~~~~~~~~ 57 (287)
T d1pgua2 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS-----------------------MHQDHSNLIVSLDNSKA 57 (287)
T ss_dssp EEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTE-----------------------EECCCCSCEEEEECCST
T ss_pred eeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCC-----------------------CCCCCCCCEEEEEecCC
Confidence 3567899999999999987 99999999999999863 23568888888888765
Q ss_pred CCEEEEEeCCCcEEEEEcCCCccccc-------------------------------eeeeccccceEEEEEecCCCEEE
Q psy15157 191 APILASGSKDKTVKMFDYSKSSVRKA-------------------------------HKTIQESTFVRCLSFHPCGDYMV 239 (344)
Q Consensus 191 ~~~l~s~~~dg~i~iwd~~~~~~~~~-------------------------------~~~~~~~~~v~~~~~~~~~~~l~ 239 (344)
. .+++++.|++|++|++...+.... ........ .+.++++++..++
T Consensus 58 ~-~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 134 (287)
T d1pgua2 58 Q-EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS--PGSAVSLSQNYVA 134 (287)
T ss_dssp T-CCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSS--CEEEEEECSSEEE
T ss_pred C-eEEEEeeccccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccc--eeeeeeccCccee
Confidence 4 578888888888888654321000 00001111 2345677888888
Q ss_pred EEeCCC-EEEEE------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEE
Q psy15157 240 VGTDHF-VLRLY------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294 (344)
Q Consensus 240 ~~~~~~-~i~~~------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~ 294 (344)
+++.++ .+++| +|++.+|++|+.||.|++||+.+++........|. ..|++++|
T Consensus 135 v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~-~~v~~~~~ 213 (287)
T d1pgua2 135 VGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT-SKINAISW 213 (287)
T ss_dssp EEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS-SCEEEEEE
T ss_pred eeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccc-cccceeee
Confidence 887765 67887 78999999999999999999999987766544555 47999999
Q ss_pred ccC----------CCEEEEEeCCCcEEEEEcCC-CeeEEEeecCCCcCceee
Q psy15157 295 TRN----------GKYLLSSGKDSLVKLWELSS-ARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 295 ~~~----------~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~ 335 (344)
+|+ +.+|++|+.|+.|++||+++ ++.+..+.+|......+.
T Consensus 214 ~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~ 265 (287)
T d1pgua2 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLL 265 (287)
T ss_dssp CCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEE
T ss_pred cccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEE
Confidence 875 46899999999999999977 567777778876655443
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=4.9e-23 Score=172.06 Aligned_cols=188 Identities=22% Similarity=0.397 Sum_probs=149.8
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
...+|...|+|++| +|++||||+.||+|+|||+.+ .+.+.++.+|.+.|++++| ++++
T Consensus 10 ~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~------------------~~~~~~l~~H~~~V~~v~~--~~~~ 67 (293)
T d1p22a2 10 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT------------------LECKRILTGHTGSVLCLQY--DERV 67 (293)
T ss_dssp CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS------------------CCEEEEECCCSSCEEEEEC--CSSE
T ss_pred ccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCC------------------CcEEEEEecCCCCEeeeec--ccce
Confidence 34678899999765 699999999999999999853 5678899999999999987 5679
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------------------- 250 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------------------- 250 (344)
|++|+.||.|++|++..+....... .. ......+.+....++++..++.+.+|
T Consensus 68 l~s~s~D~~i~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 143 (293)
T d1p22a2 68 IITGSSDSTVRVWDVNTGEMLNTLI--HH--CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 143 (293)
T ss_dssp EEEEETTSCEEEEESSSCCEEEEEC--CC--CSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEE
T ss_pred eeccccccccccccccccccccccc--cc--ccccccccccccceeecccccceeEeecccccccccccccccccccccc
Confidence 9999999999999998875433222 11 12234456677788888888888887
Q ss_pred -cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC
Q psy15157 251 -SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGS 329 (344)
Q Consensus 251 -~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 329 (344)
......+++++.|+.|++||.++++.+..+.... ..+..+.++ +.++++++.||.|++||+++++.+..+.++..
T Consensus 144 ~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~--~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 219 (293)
T d1p22a2 144 VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK--RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 219 (293)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred ceecccccccccCCCceeeecCCCCcEEEEEcccc--cccccccCC--CCeEEEecCCCEEEEEecccceeeeeecccce
Confidence 2345667889999999999999999888886433 347776664 67899999999999999999999999888765
Q ss_pred cC
Q psy15157 330 MG 331 (344)
Q Consensus 330 ~~ 331 (344)
..
T Consensus 220 ~v 221 (293)
T d1p22a2 220 LV 221 (293)
T ss_dssp CE
T ss_pred ee
Confidence 43
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=6e-23 Score=180.50 Aligned_cols=214 Identities=12% Similarity=0.144 Sum_probs=151.6
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEE------
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEF------ 187 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~------ 187 (344)
...+|.+.|++++++ +++++|||.|++|+|||..+..... ..........|...+..+..
T Consensus 9 ~~~~H~~~I~~v~~~--~~~l~S~S~D~~iriWd~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (393)
T d1sq9a_ 9 AGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNEN------------PKDKSYSHFVHKSGLHHVDVLQAIER 74 (393)
T ss_dssp ESSCSSSCEEEEEEC--SSEEEEEETTSEEEEEESBCCTTCC------------GGGGEEEEECCTTCEEEEEEEEEEET
T ss_pred cCCcccCccEEEEEe--CCEEEEEECCCeEEEEECCCCCCCc------------ccceeEeeeeccCCceEeeeEeeecc
Confidence 457999999999987 4699999999999999976432111 01112223334443322222
Q ss_pred cC-CCCEEEEEeCCCcEEEEEcCCCccccceee--------eccccceEEEEEecC-----CCEEEEEeCCCEEEEE---
Q psy15157 188 HP-SAPILASGSKDKTVKMFDYSKSSVRKAHKT--------IQESTFVRCLSFHPC-----GDYMVVGTDHFVLRLY--- 250 (344)
Q Consensus 188 ~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~~~v~~~~~~~~-----~~~l~~~~~~~~i~~~--- 250 (344)
+. +..++++++.||.|++|++........... ..+...+..++|.++ +.++++++.|+.+.+|
T Consensus 75 ~~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~ 154 (393)
T d1sq9a_ 75 DAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH 154 (393)
T ss_dssp TTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEE
T ss_pred CCCCCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEee
Confidence 21 234788999999999999876543222211 113345677888775 4688999999999998
Q ss_pred --------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecc-----cCCCc
Q psy15157 251 --------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSK-----AHDGA 287 (344)
Q Consensus 251 --------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~ 287 (344)
+|++ ++++|+.|+.|++||+.+++.+..+.. .|. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~-~ 232 (393)
T d1sq9a_ 155 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS-N 232 (393)
T ss_dssp SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC-C
T ss_pred cCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccccccccccccccc-c
Confidence 3444 889999999999999999988766542 233 5
Q ss_pred cEEEEEEccCCCEEEEEeCCCc---EEEEEcCCCeeEEEeecC-----------CCcCceeeeeeeccCC
Q psy15157 288 EISSLTFTRNGKYLLSSGKDSL---VKLWELSSARCLIAYTGA-----------GSMGQQFELTLTVDAD 343 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~~~dg~---i~vwd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 343 (344)
+|++++|+|+|++|++|+.|++ |++||+.+++++..+... ++.....++.|++|++
T Consensus 233 ~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~ 302 (393)
T d1sq9a_ 233 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302 (393)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS
T ss_pred eEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCC
Confidence 7999999999999999999875 999999999999888632 2233456666677654
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.92 E-value=2.4e-23 Score=175.75 Aligned_cols=177 Identities=21% Similarity=0.347 Sum_probs=142.3
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL 194 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 194 (344)
...|...+.+++|+++++++++++ ++.+++|+... ..... ....+.+++|+|++++|
T Consensus 95 ~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~--------------------~~~~~--~~~~~~~~~~s~~~~~l 151 (299)
T d1nr0a2 95 ANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGK--------------------LTEVP--ISYNSSCVALSNDKQFV 151 (299)
T ss_dssp EEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTE--------------------EEEEE--CSSCEEEEEECTTSCEE
T ss_pred cccccccccccccccccccccccc-ccccccccccc--------------------ccccc--ccccccccccccccccc
Confidence 457888999999999999877765 56899998642 12222 33457899999999999
Q ss_pred EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------
Q psy15157 195 ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------ 250 (344)
Q Consensus 195 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------ 250 (344)
++|+.||.|++||+++++... .....|...|++++|+|++.++++++.++.+++|
T Consensus 152 ~~g~~dg~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l 230 (299)
T d1nr0a2 152 AVGGQDSKVHVYKLSGASVSE-VKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACV 230 (299)
T ss_dssp EEEETTSEEEEEEEETTEEEE-EEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEE
T ss_pred ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999998765433 3345678889999999999999999999999998
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEee-ecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVAT-FSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELS 316 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~ 316 (344)
+|++.+|++|+.||.|++||++++..... ....+....+.++.| +++++|++++.|+.|++||+.
T Consensus 231 ~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred cccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence 78999999999999999999987654322 222344456777765 467899999999999999984
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=5.2e-23 Score=175.76 Aligned_cols=198 Identities=13% Similarity=0.257 Sum_probs=151.0
Q ss_pred ceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC-----------------------------
Q psy15157 111 ETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE----------------------------- 161 (344)
Q Consensus 111 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~----------------------------- 161 (344)
....+.+|.+.|++++|++ ++|++|+.|+.+++|+..............
T Consensus 49 ~~~~~~~h~~~V~~v~~~~--~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 126 (342)
T d2ovrb2 49 CLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 126 (342)
T ss_dssp EEEECCCCSSCEEEEEEET--TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSS
T ss_pred EEEEEeCCCCCEEEEEeCC--CccccceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeeccc
Confidence 4556789999999999986 499999999999999986422111000000
Q ss_pred ---------------------------------CcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q psy15157 162 ---------------------------------PQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDY 208 (344)
Q Consensus 162 ---------------------------------~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 208 (344)
...+......+..+.+|...+..+.+ ++..+++|+.||.|++||+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~ 204 (342)
T d2ovrb2 127 GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 204 (342)
T ss_dssp CCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEET
T ss_pred ccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeec
Confidence 00111223445666777776666554 6779999999999999999
Q ss_pred CCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE------------------------cCCCCEEEEEeCCC
Q psy15157 209 SKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY------------------------SSDGRIYCSGSKDG 264 (344)
Q Consensus 209 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~------------------------~~~~~~l~~~~~dg 264 (344)
+.++.... ...|...+.+++++ ++++++++.|+.+++| ..+++++++|+.||
T Consensus 205 ~~~~~~~~--~~~~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg 280 (342)
T d2ovrb2 205 ETGNCIHT--LTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG 280 (342)
T ss_dssp TTCCEEEE--ECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS
T ss_pred ccceeeeE--ecccccceeEEecC--CCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCC
Confidence 98865433 34567778877765 5799999999999999 45778999999999
Q ss_pred cEEEEeCCCCeEEeeecc----cCCCccEEEEEEccCCCEEEEEeCCCc----EEEEEcCC
Q psy15157 265 DIKIWDGVSSKCVATFSK----AHDGAEISSLTFTRNGKYLLSSGKDSL----VKLWELSS 317 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~----~~~~~~v~~i~~~~~~~~l~s~~~dg~----i~vwd~~~ 317 (344)
.|++||+++++.+..+.. .|. ..|++++|+|++.+|++|+.||+ |++||+..
T Consensus 281 ~i~iwd~~tg~~i~~~~~~~~~~~~-~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 281 TVKLWDLKTGEFIRNLVTLESGGSG-GVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp EEEEEETTTCCEEEEEEECTTGGGT-CEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEEECCCCCEEEEEecccCCCCC-CCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 999999999998877642 233 46999999999999999999986 99999864
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=1.4e-22 Score=173.98 Aligned_cols=198 Identities=17% Similarity=0.204 Sum_probs=150.4
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC----------------------------
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE---------------------------- 161 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~---------------------------- 161 (344)
.....+.+|.+.|++++|+++ .+|++|+.|++|++|+..............
T Consensus 44 ~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i 122 (355)
T d1nexb2 44 KFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 122 (355)
T ss_dssp EEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred cEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEEE
Confidence 345678899999999999985 589999999999999985421100000000
Q ss_pred -------------------------------------------------------------CcCCCCCCceEEEecCCcC
Q psy15157 162 -------------------------------------------------------------PQNDQQGHPVIRTLYDHIE 180 (344)
Q Consensus 162 -------------------------------------------------------------~~~~~~~~~~~~~~~~h~~ 180 (344)
...+......+....++..
T Consensus 123 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 202 (355)
T d1nexb2 123 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD 202 (355)
T ss_dssp EECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeecccc
Confidence 0001123344556677888
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------
Q psy15157 181 EVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------- 250 (344)
Q Consensus 181 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------- 250 (344)
.+.++.|+|++..+++++.|+.|++||+.++..... ...|...|.+++++ ++++++|+.|+.|++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~--~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~ 278 (355)
T d1nexb2 203 RIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT--LQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS 278 (355)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccccccccceeeecccccceEEeeeccccccccc--cccccccccccccc--cceeeeeecccccccccccccceecc
Confidence 899999999999999999999999999998865443 34678889999886 5799999999999999
Q ss_pred ------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 251 ------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 251 ------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
++++.++++| .|+.|++||+++++++.....+|. ..|.+++|+|+ .++++++.||.++||.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~-~~V~~v~~~~~-~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 279 YHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKDA-DQIWSVNFKGK-TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp EECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTTC-SEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred cccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCCC-CCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence 4566776665 589999999999998866544555 47999999986 57788899999766643
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=1e-21 Score=164.63 Aligned_cols=161 Identities=18% Similarity=0.328 Sum_probs=120.7
Q ss_pred EEECCCCCEEEEEeCCC-eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcE
Q psy15157 125 GAFSIDGQLCATGSVDA-SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTV 203 (344)
Q Consensus 125 ~~~s~~~~~l~sg~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 203 (344)
.+++++++.+++++.|+ .+++|++... .........|.+.+++++|+|++.+|++|+.||.|
T Consensus 124 ~~~~~~~~~~~v~~~~~~~v~~~~~~~~-----------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 186 (287)
T d1pgua2 124 SAVSLSQNYVAVGLEEGNTIQVFKLSDL-----------------EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKI 186 (287)
T ss_dssp EEEEECSSEEEEEETTTSCEEEEETTEE-----------------EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeeccCcceeeeccccceeeeeecccc-----------------ceeeeeeeccCCceeEEEeccCccccccccccccc
Confidence 34566677777777765 6899987532 11122234578899999999999999999999999
Q ss_pred EEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEEeeecc
Q psy15157 204 KMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS-KCVATFSK 282 (344)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~ 282 (344)
++||+.++..... ....|...|.+++|+|.+....... .++.++++|+.|+.|++||++++ +.+..+ .
T Consensus 187 ~i~d~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~~~~~---------~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~-~ 255 (287)
T d1pgua2 187 LLYDLQSREVKTS-RWAFRTSKINAISWKPAEKGANEEE---------IEEDLVATGSLDTNIFIYSVKRPMKIIKAL-N 255 (287)
T ss_dssp EEEETTTTEEEEC-CSCCCSSCEEEEEECCCC------C---------CSCCEEEEEETTSCEEEEESSCTTCCEEET-T
T ss_pred cceeecccccccc-cccccccccceeeeccccccccccc---------CCCCeeEeecCCCeEEEEECCCCCeEEEEe-C
Confidence 9999988754322 2345788899999999887655443 57889999999999999999774 444444 3
Q ss_pred cCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 283 AHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 283 ~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
+|. ..|+++.|+|++ .|++++.|+.|++|++
T Consensus 256 ~h~-~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 256 AHK-DGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp SST-TCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred CCC-CCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 565 469999999986 5899999999999996
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=5.2e-21 Score=159.55 Aligned_cols=193 Identities=23% Similarity=0.412 Sum_probs=144.2
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCC----------------------C---cC
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSE----------------------P---QN 164 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~----------------------~---~~ 164 (344)
.....+.+|.+.|++++| ++++|++|+.|+.|++|++............. . ..
T Consensus 46 ~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (293)
T d1p22a2 46 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123 (293)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECS
T ss_pred cEEEEEecCCCCEeeeec--ccceeecccccccccccccccccccccccccccccccccccccceeecccccceeEeecc
Confidence 345678899999999987 57899999999999999997643322111110 0 00
Q ss_pred CCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC
Q psy15157 165 DQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH 244 (344)
Q Consensus 165 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 244 (344)
..........+..|...|..+.+.+ ..+++++.|+.|++||+++++....+ ..+...+..+.+ ++.++++++.|
T Consensus 124 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i~~~d~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~d 197 (293)
T d1p22a2 124 SPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTL--NGHKRGIACLQY--RDRLVVSGSSD 197 (293)
T ss_dssp SSSCCEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEE--ETTEEEEEETT
T ss_pred ccccccccccccccccccccceecc--cccccccCCCceeeecCCCCcEEEEE--cccccccccccC--CCCeEEEecCC
Confidence 1122234556677888888888765 47889999999999999988654433 345566776666 46799999999
Q ss_pred CEEEEE---------------------cCCCCEEEEEeCCCcEEEEeCCCC---------eEEeeecccCCCccEEEEEE
Q psy15157 245 FVLRLY---------------------SSDGRIYCSGSKDGDIKIWDGVSS---------KCVATFSKAHDGAEISSLTF 294 (344)
Q Consensus 245 ~~i~~~---------------------~~~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~~v~~i~~ 294 (344)
+.+++| .+++.+|++|+.||.|++||+.+. ..+..+. .|. ..|++++|
T Consensus 198 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~H~-~~V~~v~~ 275 (293)
T d1p22a2 198 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV-EHS-GRVFRLQF 275 (293)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC-CCS-SCCCCEEE
T ss_pred CEEEEEecccceeeeeecccceeeeeccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEec-CCC-CCEEEEEE
Confidence 999999 567889999999999999996432 3455554 454 46999998
Q ss_pred ccCCCEEEEEeCCCcEEEEE
Q psy15157 295 TRNGKYLLSSGKDSLVKLWE 314 (344)
Q Consensus 295 ~~~~~~l~s~~~dg~i~vwd 314 (344)
+ +++|+|||.||+|++||
T Consensus 276 d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 276 D--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp C--SSCEEECCSSSEEEEEC
T ss_pred c--CCEEEEEecCCEEEEeC
Confidence 4 67899999999999997
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.88 E-value=5e-22 Score=171.45 Aligned_cols=188 Identities=10% Similarity=0.076 Sum_probs=150.0
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+.+|...|.+++|+|+|++|++++.++.+++|++.+ ......+..|...+.+++|+|++
T Consensus 78 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~spdg 139 (360)
T d1k32a3 78 AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET------------------GKPTVIERSREAMITDFTISDNS 139 (360)
T ss_dssp EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT------------------CCEEEEEECSSSCCCCEEECTTS
T ss_pred EEEeeCCCceEEeeeecccccccceeccccccccccccc------------------cceeeeeecccccccchhhccce
Confidence 345678999999999999999999999999999999853 45566778899999999999999
Q ss_pred CEEEEEe----------CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------
Q psy15157 192 PILASGS----------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY----------- 250 (344)
Q Consensus 192 ~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~----------- 250 (344)
++|+.+. .++.+++||+.+++.. ....+...+.++.|+|+|++|++++.++.+.+|
T Consensus 140 ~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~---~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~ 216 (360)
T d1k32a3 140 RFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF---AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV 216 (360)
T ss_dssp CEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE---ECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCS
T ss_pred eeeeeeccccccceeeccccceeeeccccCcee---eecccccccccccccCCCCEEEEEeCCCceEcccccccceeecc
Confidence 9888543 3456999999886543 223455678889999999999999998888776
Q ss_pred -------------------------------------------------------c-------------CCCCEEEEEeC
Q psy15157 251 -------------------------------------------------------S-------------SDGRIYCSGSK 262 (344)
Q Consensus 251 -------------------------------------------------------~-------------~~~~~l~~~~~ 262 (344)
. +.+.++++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
T d1k32a3 217 VSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPE 296 (360)
T ss_dssp CBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCC
T ss_pred ccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCC
Confidence 0 01112334556
Q ss_pred CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 263 DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 263 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++.|++||+.+++... +. ..|.+++|+|||++|++++.||.|++||+.+++...++.-
T Consensus 297 ~~~i~~~d~~~~~~~~-~~-----~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~ 354 (360)
T d1k32a3 297 KGVLLKYDVKTRKVTE-VK-----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVET 354 (360)
T ss_dssp CEEEEEEETTTCCEEE-EE-----EEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCC
T ss_pred CCEEEEEECCCCeEEE-ec-----CCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEe
Confidence 7889999998876532 21 2589999999999999999999999999999988776654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=2.8e-20 Score=165.02 Aligned_cols=203 Identities=8% Similarity=0.044 Sum_probs=143.8
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+..| ..+..++|||||+++++++.|++|++||+.+..... ...+....+|.+.+.+++|+|||
T Consensus 55 ~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~-------------~~~i~~~~~~~~~~~s~~~spDG 120 (426)
T d1hzua2 55 VKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK-------------VAEIKIGIEARSVESSKFKGYED 120 (426)
T ss_dssp EEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE-------------EEEEECCSEEEEEEECCSTTCTT
T ss_pred EEEEeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeE-------------EEEEeCCCCCcceEEeeeecCCC
Confidence 4456666 469999999999999999999999999997532110 01123344677778888899999
Q ss_pred CEE-EEEeCCCcEEEEEcCCCccccce-----------------------------------------------------
Q psy15157 192 PIL-ASGSKDKTVKMFDYSKSSVRKAH----------------------------------------------------- 217 (344)
Q Consensus 192 ~~l-~s~~~dg~i~iwd~~~~~~~~~~----------------------------------------------------- 217 (344)
+++ +++..++.+++||..++......
T Consensus 121 ~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~ 200 (426)
T d1hzua2 121 RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV 200 (426)
T ss_dssp TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEE
T ss_pred CEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceee
Confidence 976 55568899999997765432111
Q ss_pred eeeccccceEEEEEecCCCEEEEEeCCC-EEEEE----------------------------------------------
Q psy15157 218 KTIQESTFVRCLSFHPCGDYMVVGTDHF-VLRLY---------------------------------------------- 250 (344)
Q Consensus 218 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~i~~~---------------------------------------------- 250 (344)
....+...+..+.|+|++++++++..+. .+.++
T Consensus 201 ~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~ 280 (426)
T d1hzua2 201 TSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISL 280 (426)
T ss_dssp EEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEE
T ss_pred EEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEE
Confidence 0011233456788888888877765332 22222
Q ss_pred -------------------------------cCCCCEEEE-------EeCCCcEEEEeCCCCeEEeeecc-------cCC
Q psy15157 251 -------------------------------SSDGRIYCS-------GSKDGDIKIWDGVSSKCVATFSK-------AHD 285 (344)
Q Consensus 251 -------------------------------~~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~~-------~~~ 285 (344)
+|+++++++ ++.|++|+|||+.+++...++.. ...
T Consensus 281 ~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~ 360 (426)
T d1hzua2 281 IGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 360 (426)
T ss_dssp EECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS
T ss_pred eeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCC
Confidence 789999984 56688999999999876654421 111
Q ss_pred CccEEEEEEccCCCEEEEE-----eCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 286 GAEISSLTFTRNGKYLLSS-----GKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 286 ~~~v~~i~~~~~~~~l~s~-----~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
...+.+++|+|||++++.+ +.+|.|+|||.++++.+..++++.
T Consensus 361 ~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~ 408 (426)
T d1hzua2 361 AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 408 (426)
T ss_dssp CCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred CccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC
Confidence 2458999999999987543 468889999999999999998874
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.84 E-value=1e-19 Score=155.74 Aligned_cols=184 Identities=10% Similarity=0.077 Sum_probs=139.9
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCEE-EEEeCCCc
Q psy15157 125 GAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPIL-ASGSKDKT 202 (344)
Q Consensus 125 ~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l-~s~~~dg~ 202 (344)
++|++++++|++++.|++|.+||+.+ .+.+.++. .|...+.+++|+|||+++ ++++.++.
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t------------------~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~ 63 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVAS------------------DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTT------------------TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCC------------------CCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCc
Confidence 47899999999999999999999964 45566665 456678899999999976 56668899
Q ss_pred EEEEEcCCCccccceeeecc----ccceEEEEEecCCCEEEEEe------------CCCEEEEE----------------
Q psy15157 203 VKMFDYSKSSVRKAHKTIQE----STFVRCLSFHPCGDYMVVGT------------DHFVLRLY---------------- 250 (344)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~------------~~~~i~~~---------------- 250 (344)
|++||+.+++.......... ...+..++|+|+|++++++. .+..+.+|
T Consensus 64 v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 143 (346)
T d1jmxb_ 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM 143 (346)
T ss_dssp EEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC
T ss_pred EEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeec
Confidence 99999998865543332111 12345688999999887764 23444443
Q ss_pred --------------------------------------------------------------------------------
Q psy15157 251 -------------------------------------------------------------------------------- 250 (344)
Q Consensus 251 -------------------------------------------------------------------------------- 250 (344)
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (346)
T d1jmxb_ 144 PRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDP 223 (346)
T ss_dssp CSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------
T ss_pred cCceEEEEecCCCEEEEeCCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeE
Confidence
Q ss_pred ------------------------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEE
Q psy15157 251 ------------------------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTF 294 (344)
Q Consensus 251 ------------------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~ 294 (344)
++++.+++.+. ++.|.+||..+++.+..+...+ .+.+++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~---~~~~va~ 299 (346)
T d1jmxb_ 224 ATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDH---TYYCVAF 299 (346)
T ss_dssp CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSS---CCCEEEE
T ss_pred eeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEcCCC---CEEEEEE
Confidence 23444444433 3579999999999888775332 4889999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q psy15157 295 TRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAGSM 330 (344)
Q Consensus 295 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 330 (344)
+|||++|++++.|+.|++||+.+++.+.+++.+++.
T Consensus 300 s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g~ 335 (346)
T d1jmxb_ 300 DKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGD 335 (346)
T ss_dssp CSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSSC
T ss_pred cCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCCC
Confidence 999999999999999999999999999999966543
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.84 E-value=5.2e-20 Score=158.58 Aligned_cols=171 Identities=10% Similarity=0.039 Sum_probs=137.5
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCC--eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATGSVDA--SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
.+|...|++++|+|||++|++++.+. .|++||.++ .....+..|...|.+++|+|++++
T Consensus 39 ~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~-------------------~~~~~~~~~~~~v~~~~~spdg~~ 99 (360)
T d1k32a3 39 VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT-------------------GKAEKFEENLGNVFAMGVDRNGKF 99 (360)
T ss_dssp CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT-------------------CCEEECCCCCCSEEEEEECTTSSE
T ss_pred ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCC-------------------CcEEEeeCCCceEEeeeecccccc
Confidence 37999999999999999998776553 799999863 234567889999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy15157 194 LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVS 273 (344)
Q Consensus 194 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~ 273 (344)
|++++.++.+++|++.+++..... ..+...+.+++|+|+|++|+.+..+ ......+..++.+++||..+
T Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~la~~~~~---------~~~~~~~~~~~~~~v~d~~~ 168 (360)
T d1k32a3 100 AVVANDRFEIMTVDLETGKPTVIE--RSREAMITDFTISDNSRFIAYGFPL---------KHGETDGYVMQAIHVYDMEG 168 (360)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEE--ECSSSCCCCEEECTTSCEEEEEEEE---------CSSTTCSCCEEEEEEEETTT
T ss_pred cceeccccccccccccccceeeee--ecccccccchhhccceeeeeeeccc---------cccceeeccccceeeecccc
Confidence 999999999999999988654433 3466678899999999999875432 22223456677899999999
Q ss_pred CeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 274 SKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 274 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
++...... +. ..+..+.|+|+|++|++++.++.+++||.....
T Consensus 169 ~~~~~~~~-~~--~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~ 211 (360)
T d1k32a3 169 RKIFAATT-EN--SHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 211 (360)
T ss_dssp TEEEECSC-SS--SBEEEEEECTTSCEEEEEESCCCCCEECSSSSC
T ss_pred Cceeeecc-cc--cccccccccCCCCEEEEEeCCCceEcccccccc
Confidence 88765553 22 358889999999999999999999999976543
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=3.9e-20 Score=157.32 Aligned_cols=235 Identities=14% Similarity=0.135 Sum_probs=155.8
Q ss_pred CCCCCCccchhcccCCCceeeec-CCCCCCCCCCCccceeEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCcc
Q psy15157 75 EPSIGLNPIQEILIGPGLDLEFE-SDVDPSAPEPAQYETAYVTSHKSPCRAGAFSID-GQLCATGSVDASIKILDVDRML 152 (344)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~v~iwd~~~~~ 152 (344)
..++.+.|....++.++.|-... .+... ...........+|.++|++++|+++ +.+|++|+.||.|++|+.....
T Consensus 14 I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~---~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~ 90 (342)
T d1yfqa_ 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDI---QAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEET---TTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred EEEEEEeCCCCEEEEEECCCeEEEEEccC---CCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccc
Confidence 34567778777777765442211 11111 1112222334579999999999986 4589999999999999997543
Q ss_pred ccccCCCCCCc-------------------------CC----CCCCceEEEecCC--cCCeEEEEEcCCCCEEEEEeCCC
Q psy15157 153 AKSSMESSEPQ-------------------------ND----QQGHPVIRTLYDH--IEEVTCLEFHPSAPILASGSKDK 201 (344)
Q Consensus 153 ~~~~~~~~~~~-------------------------~~----~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~~~dg 201 (344)
........... ++ ............+ ........+.+.+..+++++.||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 170 (342)
T d1yfqa_ 91 SFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNS 170 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTT
T ss_pred ccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCC
Confidence 32221111000 00 0001111122222 22344556777888999999999
Q ss_pred cEEEEEcCCCccccceee-eccccceEEEEEe-cCCCEEEEEeCCCEEEEE-----------------------------
Q psy15157 202 TVKMFDYSKSSVRKAHKT-IQESTFVRCLSFH-PCGDYMVVGTDHFVLRLY----------------------------- 250 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~-~~~~~l~~~~~~~~i~~~----------------------------- 250 (344)
.|++||+........... ......+.+..+. .++..+++++.++.+.+|
T Consensus 171 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
T d1yfqa_ 171 QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNL 250 (342)
T ss_dssp EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSS
T ss_pred cEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcc
Confidence 999999987654333322 2233345555554 467889999999998876
Q ss_pred ---------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 251 ---------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 251 ---------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
+|++++|++|+.||.|++||+.+++.+..+...+ .+..++|+|++++|++++.|+.+++|..
T Consensus 251 ~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~---~~~~~~~s~~~~~l~~a~sdd~~~~~~~ 321 (342)
T d1yfqa_ 251 AYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN---EDSVVKIACSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS---SSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred cccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC---CCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence 6889999999999999999999999988886443 2456788889999999999998888865
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.82 E-value=9.4e-18 Score=140.63 Aligned_cols=184 Identities=14% Similarity=0.146 Sum_probs=136.4
Q ss_pred CCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE-EE
Q psy15157 118 HKSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI-LA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~ 195 (344)
....+..++|+|||+++ ++++.++.|++||+.+ ...+..+..+. .+..++|++++.. ++
T Consensus 30 ~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 90 (301)
T d1l0qa2 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT------------------NNVIATVPAGS-SPQGVAVSPDGKQVYV 90 (301)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT------------------TEEEEEEECSS-SEEEEEECTTSSEEEE
T ss_pred CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC------------------Cceeeeeeccc-cccccccccccccccc
Confidence 33568899999999977 5677899999999964 44556666555 4688999999985 45
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE------------------------
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY------------------------ 250 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~------------------------ 250 (344)
++..++.+.+|+..+++....+ .......++.++|+|..++++. .++.+.+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (301)
T d1l0qa2 91 TNMASSTLSVIDTTSNTVAGTV---KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTP 167 (301)
T ss_dssp EETTTTEEEEEETTTTEEEEEE---ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECT
T ss_pred cccccceeeecccccceeeeec---cccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeec
Confidence 6667789999999877543322 2334456677777776665433 34444443
Q ss_pred ----------------------------------------cCCCCEEEEEeC---CCcEEEEeCCCCeEEeeecccCCCc
Q psy15157 251 ----------------------------------------SSDGRIYCSGSK---DGDIKIWDGVSSKCVATFSKAHDGA 287 (344)
Q Consensus 251 ----------------------------------------~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~ 287 (344)
++++..++.++. ++.|++||..+++.+..+.. + .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~-~--~ 244 (301)
T d1l0qa2 168 DGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-G--P 244 (301)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-C--S
T ss_pred cccceeeecccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcC-C--C
Confidence 577777765543 46799999999998887753 2 3
Q ss_pred cEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 288 EISSLTFTRNGKYL-LSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 288 ~v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
.+.+++|+|||++| ++++.|+.|++||+.+++.+.++.-
T Consensus 245 ~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v 284 (301)
T d1l0qa2 245 DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV 284 (301)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence 58999999999987 5777899999999999999999874
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.82 E-value=3.1e-18 Score=145.77 Aligned_cols=186 Identities=11% Similarity=0.060 Sum_probs=141.6
Q ss_pred cCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc-----CCeEEEEEcCC
Q psy15157 117 SHKSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI-----EEVTCLEFHPS 190 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~ 190 (344)
.+...+.+++|+|||+++ ++++.++.|.+||+.++ +.+..+..+. ..+..++|+|+
T Consensus 31 ~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~------------------~~~~~~~~~~~~~~~~~~~~v~~s~d 92 (337)
T d1pbyb_ 31 DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG------------------ETLGRIDLSTPEERVKSLFGAALSPD 92 (337)
T ss_dssp TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC------------------CEEEEEECCBTTEEEECTTCEEECTT
T ss_pred CCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCC------------------cEEEEEecCCCcccccceeeEEEcCC
Confidence 455678899999999987 56778999999999753 3333433332 33457899999
Q ss_pred CCEEEEEe------------CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE--------
Q psy15157 191 APILASGS------------KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------- 250 (344)
Q Consensus 191 ~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------- 250 (344)
++.++++. .++.+.+||..+++....+. ....+..++|+|+|+++++++.+..+.-+
T Consensus 93 g~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~ 169 (337)
T d1pbyb_ 93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE---APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVED 169 (337)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE---CCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEE
T ss_pred CcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc---ccCCceEEEEcCCCCEEEEEcCCcceeeeecCcEEEE
Confidence 99887776 36788999998876544333 34557789999999999998765433210
Q ss_pred -------------------------------------------------------------------------------c
Q psy15157 251 -------------------------------------------------------------------------------S 251 (344)
Q Consensus 251 -------------------------------------------------------------------------------~ 251 (344)
+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (337)
T d1pbyb_ 170 KPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVN 249 (337)
T ss_dssp ECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC
T ss_pred eecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEec
Confidence 3
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 252 SDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 252 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+++.+++.+ ++.|++||+.+++.+..+... ..+.+++|+|||++|++++.|+.|++||+.+++.+.+++-++
T Consensus 250 ~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~---~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~~g 321 (337)
T d1pbyb_ 250 PAKTRAFGA--YNVLESFDLEKNASIKRVPLP---HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp TTSSEEEEE--ESEEEEEETTTTEEEEEEECS---SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred ccceEEEEc--cccEEEEECCCCcEEEEEcCC---CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEECCC
Confidence 455555544 578999999999999888632 247899999999999999999999999999999999887543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.81 E-value=1.4e-19 Score=160.64 Aligned_cols=87 Identities=9% Similarity=-0.046 Sum_probs=62.3
Q ss_pred eeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 112 TAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 112 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
...+..| ..+..++|||||+++++++.|++|++||+.+..... ...+....+|.+.+.+.+|+|||
T Consensus 55 ~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~-------------~~~i~~~~~~~~~~~s~~~SpDG 120 (432)
T d1qksa2 55 KTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT-------------VAEIKIGSEARSIETSKMEGWED 120 (432)
T ss_dssp EEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE-------------EEEEECCSEEEEEEECCSTTCTT
T ss_pred EEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceE-------------EEEEecCCCCCCeEEecccCCCC
Confidence 4445555 469999999999999999999999999987531100 11223334566667777788888
Q ss_pred CEE-EEEeCCCcEEEEEcCCCc
Q psy15157 192 PIL-ASGSKDKTVKMFDYSKSS 212 (344)
Q Consensus 192 ~~l-~s~~~dg~i~iwd~~~~~ 212 (344)
++| ++++.+++|++||..+++
T Consensus 121 ~~l~vs~~~~~~v~i~d~~t~~ 142 (432)
T d1qksa2 121 KYAIAGAYWPPQYVIMDGETLE 142 (432)
T ss_dssp TEEEEEEEETTEEEEEETTTCC
T ss_pred CEEEEEcCCCCeEEEEeCcccc
Confidence 864 677778888888877654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.80 E-value=1.5e-18 Score=153.85 Aligned_cols=190 Identities=12% Similarity=0.122 Sum_probs=138.9
Q ss_pred EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q psy15157 133 LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSS 212 (344)
Q Consensus 133 ~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 212 (344)
++++++.||+|+|||+.+ .+.+.++..|. .+..++|+|||++|++++.|++|++||+.+++
T Consensus 34 ~~V~~~~dg~v~vwD~~t------------------~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~ 94 (426)
T d1hzua2 34 FSVTLRDAGQIALVDGDS------------------KKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKE 94 (426)
T ss_dssp EEEEETTTTEEEEEETTT------------------CSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSS
T ss_pred EEEEEcCCCEEEEEECCC------------------CcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCc
Confidence 568888999999999964 56777887764 58999999999999999999999999999886
Q ss_pred cccceee---eccccceEEEEEecCCCEEEEE-eCCCEEEEE--------------------------------------
Q psy15157 213 VRKAHKT---IQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY-------------------------------------- 250 (344)
Q Consensus 213 ~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~-------------------------------------- 250 (344)
....... ..+...+.+++|+|+|++++++ ..++.+.+|
T Consensus 95 ~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~ 174 (426)
T d1hzua2 95 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 174 (426)
T ss_dssp CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred eeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCC
Confidence 5433322 1344456667788899987655 467778776
Q ss_pred ----------------------------------------cCCCCEEEEEeC-CCcEEEEeCCCCeEEee----------
Q psy15157 251 ----------------------------------------SSDGRIYCSGSK-DGDIKIWDGVSSKCVAT---------- 279 (344)
Q Consensus 251 ----------------------------------------~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~---------- 279 (344)
++++++++++.. +..+.+++..+++.+..
T Consensus 175 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (426)
T d1hzua2 175 PEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG 254 (426)
T ss_dssp SEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCS
T ss_pred CEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCccccc
Confidence 567776666543 34566777665544321
Q ss_pred --------------------------------------------ecccCCCccEEEEEEccCCCEEEE-------EeCCC
Q psy15157 280 --------------------------------------------FSKAHDGAEISSLTFTRNGKYLLS-------SGKDS 308 (344)
Q Consensus 280 --------------------------------------------~~~~~~~~~v~~i~~~~~~~~l~s-------~~~dg 308 (344)
+. .| +..+.+++|+|++++|++ ++.|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~-g~-~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~ 332 (426)
T d1hzua2 255 RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-GQ-GGGSLFIKTHPKSSHLYVDTTFNPDARISQ 332 (426)
T ss_dssp CCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEE-CS-SSCCCCEECCTTCSEEEECCTTCSSHHHHT
T ss_pred ceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEe-cC-CCceeEEEcCCCCceEEEeecCCCCcccCC
Confidence 11 12 234788999999999994 56689
Q ss_pred cEEEEEcCCCeeEEEeecC-------CCcCceeeeeeeccCC
Q psy15157 309 LVKLWELSSARCLIAYTGA-------GSMGQQFELTLTVDAD 343 (344)
Q Consensus 309 ~i~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 343 (344)
+|+|||+.+++...++..+ .+..+...+.|++|++
T Consensus 333 tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk 374 (426)
T d1hzua2 333 SVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD 374 (426)
T ss_dssp CEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSS
T ss_pred EEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCC
Confidence 9999999999887766422 3345677888888875
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.76 E-value=2.1e-16 Score=136.85 Aligned_cols=198 Identities=13% Similarity=0.089 Sum_probs=139.0
Q ss_pred ecCCCceEEEEECCCCCEEEEE-----eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC
Q psy15157 116 TSHKSPCRAGAFSIDGQLCATG-----SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS 190 (344)
Q Consensus 116 ~~h~~~v~~~~~s~~~~~l~sg-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 190 (344)
..|.+++.+++++|||+.++.. +.++.|.+||..+ .+.+.++..+... .++|+||
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~t------------------g~~~~~~~~~~~~--~~a~SpD 76 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGS------------------GSILGHVNGGFLP--NPVAAHS 76 (373)
T ss_pred ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCC------------------CCEEEEEeCCCCc--cEEEcCC
Confidence 4688899999999999987764 2345688898754 4556666555443 7899999
Q ss_pred CCEEEEEe----------CCCcEEEEEcCCCccccceeee----------------------------------------
Q psy15157 191 APILASGS----------KDKTVKMFDYSKSSVRKAHKTI---------------------------------------- 220 (344)
Q Consensus 191 ~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~---------------------------------------- 220 (344)
|+.|++++ .++.|.+||..+++........
T Consensus 77 G~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~ 156 (373)
T d2madh_ 77 GSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQG 156 (373)
T ss_pred CCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeecc
Confidence 99888765 4578999999887643221100
Q ss_pred -----ccccceEEEEEecCCCEE-EEEeCCCEEEEE--------------------------------------------
Q psy15157 221 -----QESTFVRCLSFHPCGDYM-VVGTDHFVLRLY-------------------------------------------- 250 (344)
Q Consensus 221 -----~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~-------------------------------------------- 250 (344)
.+.....++.++|+|+.+ ++.+.++.+.+|
T Consensus 157 ~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 236 (373)
T d2madh_ 157 GSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKI 236 (373)
T ss_pred CCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceE
Confidence 001123456667776654 455666777665
Q ss_pred --------------------------------------cCCCC----------EEEEEeCCCcEEEEeCCCCeEEeeecc
Q psy15157 251 --------------------------------------SSDGR----------IYCSGSKDGDIKIWDGVSSKCVATFSK 282 (344)
Q Consensus 251 --------------------------------------~~~~~----------~l~~~~~dg~i~iwd~~~~~~~~~~~~ 282 (344)
++++. .++....++.+.+||..+++.+..+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~ 316 (373)
T d2madh_ 237 LQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL 316 (373)
T ss_pred EEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecC
Confidence 12222 233445566788888888888877753
Q ss_pred cCCCccEEEEEEccCCCE--EEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceeee
Q psy15157 283 AHDGAEISSLTFTRNGKY--LLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFEL 336 (344)
Q Consensus 283 ~~~~~~v~~i~~~~~~~~--l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 336 (344)
. ..+.+++|+|||+. +++++.|+.|++||+.+++.+.++.+++.....+++
T Consensus 317 ~---~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~ 369 (373)
T d2madh_ 317 G---HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSV 369 (373)
T ss_pred C---CCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEE
Confidence 2 35889999999984 467889999999999999999999988777666654
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.75 E-value=1.2e-16 Score=141.63 Aligned_cols=175 Identities=10% Similarity=0.009 Sum_probs=132.0
Q ss_pred CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 132 QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKS 211 (344)
Q Consensus 132 ~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 211 (344)
-++++.+.||+|.|||..+ .+++..+..+. .+..++|+|||+++++++.||+|++||+.++
T Consensus 33 ~~~v~~~d~g~v~v~D~~t------------------~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~ 93 (432)
T d1qksa2 33 LFSVTLRDAGQIALIDGST------------------YEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMK 93 (432)
T ss_dssp EEEEEETTTTEEEEEETTT------------------CCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSS
T ss_pred EEEEEEcCCCEEEEEECCC------------------CcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCC
Confidence 3468999999999999964 56677777664 6999999999999999999999999999887
Q ss_pred ccccceee---eccccceEEEEEecCCCEE-EEEeCCCEEEEE----------------------------------cCC
Q psy15157 212 SVRKAHKT---IQESTFVRCLSFHPCGDYM-VVGTDHFVLRLY----------------------------------SSD 253 (344)
Q Consensus 212 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l-~~~~~~~~i~~~----------------------------------~~~ 253 (344)
+....... ..+...+.+..|+|||+++ +++..++.+++| +++
T Consensus 94 ~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d 173 (432)
T d1qksa2 94 EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY 173 (432)
T ss_dssp SCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred CceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCC
Confidence 64332221 1233445566778899987 567789999998 344
Q ss_pred CCE-EEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCeeEEEeec
Q psy15157 254 GRI-YCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 254 ~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~ 326 (344)
|.. +++...++.|.+||..+.+......... +..+..+.|+|+|+++++++ .++.+.+||..+++.+..+..
T Consensus 174 g~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~-g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~ 247 (432)
T d1qksa2 174 RPEFIVNVKETGKILLVDYTDLNNLKTTEISA-ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 247 (432)
T ss_dssp SSEEEEEETTTTEEEEEETTCSSEEEEEEEEC-CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEccCCeEEEEEccCCCcceEEEEcc-cCccccceECCCCCEEEEeccccceEEEeecccceEEEEecc
Confidence 544 3556677899999998876554333222 24588999999999887776 456799999999988877654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=3.8e-16 Score=132.66 Aligned_cols=197 Identities=12% Similarity=0.096 Sum_probs=127.0
Q ss_pred EecCCCceEEEEECCCCCEEEEE-eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATG-SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
...|.+.|..++|||||++|+++ ..|+.|++|++.... ..........+...+..++|+|+|++
T Consensus 32 ~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~---------------~~~~~~~~~~~~~~p~~l~~spDg~~ 96 (333)
T d1ri6a_ 32 VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD---------------GALTFAAESALPGSLTHISTDHQGQF 96 (333)
T ss_dssp EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT---------------CCEEEEEEEECSSCCSEEEECTTSSE
T ss_pred EEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCC---------------CcEEEeeecccCCCceEEEEcCCCCE
Confidence 34788999999999999988555 458999999986321 01111122234455778999999998
Q ss_pred EEEEeC-CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-CEEEEE---------------------
Q psy15157 194 LASGSK-DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-FVLRLY--------------------- 250 (344)
Q Consensus 194 l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~~--------------------- 250 (344)
|++++. ++.|.+|+..............+...+.++.++|+++++++++.. ..+.+|
T Consensus 97 l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g 176 (333)
T d1ri6a_ 97 VFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG 176 (333)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT
T ss_pred EeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecC
Confidence 888875 678999987765544434334444556666777777766655432 233332
Q ss_pred -------------------------------------------------------------cCCCCEEEE-EeCCCcEEE
Q psy15157 251 -------------------------------------------------------------SSDGRIYCS-GSKDGDIKI 268 (344)
Q Consensus 251 -------------------------------------------------------------~~~~~~l~~-~~~dg~i~i 268 (344)
++++++++. +..++.+.+
T Consensus 177 ~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~ 256 (333)
T d1ri6a_ 177 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITV 256 (333)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEE
Confidence 456665444 455678888
Q ss_pred EeCCCCeEEeeecc-cCCCccEEEEEEccCCCEEEEEe-CCCcEEEE--EcCCCee--EEEeec
Q psy15157 269 WDGVSSKCVATFSK-AHDGAEISSLTFTRNGKYLLSSG-KDSLVKLW--ELSSARC--LIAYTG 326 (344)
Q Consensus 269 wd~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~vw--d~~~~~~--~~~~~~ 326 (344)
|++........+.. ...+..+.+++|+|||++|++++ .++.|++| |..+|++ +..+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l~~~~~~~~ 320 (333)
T d1ri6a_ 257 FSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV 320 (333)
T ss_dssp EEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred EEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcEEEEEeccC
Confidence 88765433222211 11223477899999999987765 56889998 5567754 344443
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.68 E-value=1.1e-15 Score=131.04 Aligned_cols=68 Identities=19% Similarity=0.207 Sum_probs=51.1
Q ss_pred cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC--EEEEEeCCCcEEEEEcCCCeeEEEeecCCCcCceee
Q psy15157 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK--YLLSSGKDSLVKLWELSSARCLIAYTGAGSMGQQFE 335 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 335 (344)
.|.+||..+++.+..+... ..+.+++|+|||+ ++++++.|+.|++||+++++.++++.+++.....+.
T Consensus 281 ~v~v~d~~t~~~~~~~~~~---~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~ 350 (355)
T d2bbkh_ 281 FVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVIT 350 (355)
T ss_dssp EEEEEETTTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEE
T ss_pred eEEEEeCCCCcEEEEecCC---CCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEE
Confidence 4666777666666655422 2478999999998 356677899999999999999999988766555443
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.64 E-value=5.5e-15 Score=125.30 Aligned_cols=167 Identities=12% Similarity=0.140 Sum_probs=126.6
Q ss_pred CEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC--CcCCeEEEEEcCCCCEE-EEEeCCCcEEEEEc
Q psy15157 132 QLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD--HIEEVTCLEFHPSAPIL-ASGSKDKTVKMFDY 208 (344)
Q Consensus 132 ~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~ 208 (344)
+|+++++.|++|+|||+.+ .+.+..+.. +...+.+++|+|||+++ ++++.++.|.+||+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s------------------~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~ 63 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEK------------------MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63 (337)
T ss_dssp EEEEEEETTTEEEEEETTT------------------TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred eEEEEEcCCCEEEEEECCC------------------CeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEEC
Confidence 5899999999999999964 344555543 44567899999999976 56778999999999
Q ss_pred CCCccccceeeec---cccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCC
Q psy15157 209 SKSSVRKAHKTIQ---ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHD 285 (344)
Q Consensus 209 ~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 285 (344)
.+++......... +...+..++|+|++++++++..+.....|. ....+..+.+||..+++....+.. .
T Consensus 64 ~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-~- 134 (337)
T d1pbyb_ 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTH-------FEVQPTRVALYDAETLSRRKAFEA-P- 134 (337)
T ss_dssp TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSC-------EEECCCEEEEEETTTTEEEEEEEC-C-
T ss_pred CCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeee-------ccccccceeeccccCCeEEEeccc-c-
Confidence 9987655443321 123345689999999998876554433222 345678899999999998888763 2
Q ss_pred CccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 286 GAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 286 ~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
..+..++|+|+|+++++++.+ +.+||..+++....+..+.
T Consensus 135 -~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~~~ 174 (337)
T d1pbyb_ 135 -RQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQS 174 (337)
T ss_dssp -SSCCCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECSTT
T ss_pred -CCceEEEEcCCCCEEEEEcCC--cceeeeecCcEEEEeecCC
Confidence 247889999999999998754 7889999999988886643
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.57 E-value=1.8e-12 Score=107.80 Aligned_cols=170 Identities=14% Similarity=0.198 Sum_probs=127.5
Q ss_pred EEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCc
Q psy15157 134 CATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPIL-ASGSKDKTVKMFDYSKSS 212 (344)
Q Consensus 134 l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~ 212 (344)
+++++.|++|.|||+.+ .+.+.++... ..+..++|+|+|++| ++++.++.|++||+.+++
T Consensus 5 yV~~~~~~~v~v~D~~t------------------~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~ 65 (301)
T d1l0qa2 5 YIANSESDNISVIDVTS------------------NKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65 (301)
T ss_dssp EEEETTTTEEEEEETTT------------------TEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred EEEECCCCEEEEEECCC------------------CeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 45677899999999965 3445555433 457899999999976 577789999999999886
Q ss_pred cccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE----------------------cCCCCEEE-EEeCCCcEEE
Q psy15157 213 VRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY----------------------SSDGRIYC-SGSKDGDIKI 268 (344)
Q Consensus 213 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~----------------------~~~~~~l~-~~~~dg~i~i 268 (344)
....+. ....+..+.|++++.+++++. .++.+.+| ++++..++ ++..++.+.+
T Consensus 66 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~ 142 (301)
T d1l0qa2 66 VIATVP---AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSV 142 (301)
T ss_dssp EEEEEE---CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeee---ccccccccccccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceee
Confidence 554433 334578899999998776654 55666665 67887765 5556788999
Q ss_pred EeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC-CcEEEEEcCCCeeEEEeecCC
Q psy15157 269 WDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD-SLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~~~~~~~~ 328 (344)
|+..+.+.+..+.... .+..+.++|+++++++++.+ +.+.+|+....+....+..+.
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (301)
T d1l0qa2 143 INTVTKAVINTVSVGR---SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA 200 (301)
T ss_dssp EETTTTEEEEEEECCS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred eeccccceeeecccCC---CceEEEeeccccceeeecccccccccccccceeeeecccccC
Confidence 9999999888776322 47889999999998887655 667888888887777766543
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.55 E-value=1e-13 Score=119.67 Aligned_cols=193 Identities=7% Similarity=-0.068 Sum_probs=123.5
Q ss_pred EEecCCCceEEEEECCCCCEEEEEe----------CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCc----
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGS----------VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHI---- 179 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---- 179 (344)
.+.++... .++|+|||+.+++.+ .|+.|.+||..+. +....+..+.
T Consensus 61 ~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~------------------~~~~~i~~p~~~~~ 120 (368)
T d1mdah_ 61 HSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF------------------LPIADIELPDAPRF 120 (368)
T ss_dssp EEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC------------------CEEEEEEETTSCSC
T ss_pred EEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCC------------------cEeeeecCCcccee
Confidence 34445443 589999999888754 4778999998653 2233322211
Q ss_pred ---CCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCccccceeeec-----cccceEEEEEecCCCEEEEEeCCCEEEEE
Q psy15157 180 ---EEVTCLEFHPSAPILASGS-KDKTVKMFDYSKSSVRKAHKTIQ-----ESTFVRCLSFHPCGDYMVVGTDHFVLRLY 250 (344)
Q Consensus 180 ---~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~i~~~ 250 (344)
.....++|+|||++|+.+. .++.+.+||+.+++......... +......+.++++|..+++...+.....+
T Consensus 121 ~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~ 200 (368)
T d1mdah_ 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred cccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCceeee
Confidence 1223589999999887765 57999999998876544332211 01112234445555544443221111110
Q ss_pred -----------------------------------------------------------------------cCCCCEEEE
Q psy15157 251 -----------------------------------------------------------------------SSDGRIYCS 259 (344)
Q Consensus 251 -----------------------------------------------------------------------~~~~~~l~~ 259 (344)
++++..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v 280 (368)
T d1mdah_ 201 IVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred eeecccccccccceeecccccCcEEEEecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEE
Confidence 345555544
Q ss_pred EeCC---------CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-E-EEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 260 GSKD---------GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-Y-LLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 260 ~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
...+ ..|.+||..+++.+..+... ..+.+++|+|||+ + ++++..|+.|++||..+++.+.+++...
T Consensus 281 ~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~---~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~ 357 (368)
T d1mdah_ 281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred EecCCCceeecCCceEEEEECCCCcEeEEecCC---CceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence 3222 24889999999988887632 3588999999997 3 4566788999999999999999998654
Q ss_pred C
Q psy15157 329 S 329 (344)
Q Consensus 329 ~ 329 (344)
.
T Consensus 358 ~ 358 (368)
T d1mdah_ 358 G 358 (368)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=3.2e-13 Score=114.21 Aligned_cols=154 Identities=12% Similarity=0.148 Sum_probs=105.7
Q ss_pred EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCC
Q psy15157 133 LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG-SKDKTVKMFDYSKS 211 (344)
Q Consensus 133 ~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~ 211 (344)
.+++++.|++|++|+++.. +...+.....|.+.+.+++|+|||++|+++ ..|+.|++|++...
T Consensus 6 v~v~~~~~~~I~v~~~~~~----------------~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~ 69 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHE----------------GALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD 69 (333)
T ss_dssp EEEEEGGGTEEEEEEECTT----------------SCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEECCCCCcEEEEEEcCC----------------CCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCC
Confidence 4577889999999999631 111222334577889999999999987554 45899999999875
Q ss_pred ccccce-eeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEE
Q psy15157 212 SVRKAH-KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEIS 290 (344)
Q Consensus 212 ~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 290 (344)
...... ........+..++|+|+|++++++ +..++.|.+|+..................+.
T Consensus 70 ~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 131 (333)
T d1ri6a_ 70 DGALTFAAESALPGSLTHISTDHQGQFVFVG------------------SYNAGNVSVTRLEDGLPVGVVDVVEGLDGCH 131 (333)
T ss_dssp TCCEEEEEEEECSSCCSEEEECTTSSEEEEE------------------ETTTTEEEEEEEETTEEEEEEEEECCCTTBC
T ss_pred CCcEEEeeecccCCCceEEEEcCCCCEEeec------------------ccCCCceeeeccccccceecccccCCCccce
Confidence 433222 222334456778999987777653 2346678888877665544443233334578
Q ss_pred EEEEccCCCEEEEEe-CCCcEEEEEcCCCee
Q psy15157 291 SLTFTRNGKYLLSSG-KDSLVKLWELSSARC 320 (344)
Q Consensus 291 ~i~~~~~~~~l~s~~-~dg~i~vwd~~~~~~ 320 (344)
++.++|+++++++++ .+..|.+|+......
T Consensus 132 ~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~ 162 (333)
T d1ri6a_ 132 SANISPDNRTLWVPALKQDRICLFTVSDDGH 162 (333)
T ss_dssp CCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred EEEeeecceeeeccccccceeeEEEeccCCc
Confidence 899999999988876 455699999877543
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.38 E-value=1.9e-12 Score=115.36 Aligned_cols=109 Identities=15% Similarity=0.073 Sum_probs=80.5
Q ss_pred EecCCCceEEEEECCCCCEEEEEeC---------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSV---------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCL 185 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 185 (344)
+..|...|.++.|||||++|+.++. ++.+.|||+.++ ....+..|...+..+
T Consensus 57 ~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~-------------------~~~~l~~~~~~~~~~ 117 (470)
T d2bgra1 57 FDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR-------------------QLITEERIPNNTQWV 117 (470)
T ss_dssp TTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-------------------EECCSSCCCTTEEEE
T ss_pred hhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCC-------------------cccccccCCcccccc
Confidence 3456788999999999999998853 567889998642 244567788899999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeec----------------cccceEEEEEecCCCEEEEEeC
Q psy15157 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ----------------ESTFVRCLSFHPCGDYMVVGTD 243 (344)
Q Consensus 186 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~~~l~~~~~ 243 (344)
.|+|||+.++.. .++.+++|+..++.......... .......+.|+|+|++|+....
T Consensus 118 ~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~ 190 (470)
T d2bgra1 118 TWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF 190 (470)
T ss_dssp EECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred ccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEe
Confidence 999999998885 46789999998875433221100 1122355789999999988753
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.38 E-value=1.7e-12 Score=109.97 Aligned_cols=124 Identities=11% Similarity=0.042 Sum_probs=95.6
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC
Q psy15157 185 LEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG 264 (344)
Q Consensus 185 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg 264 (344)
++|++++++|++++.|++|.+||+.+++....+.. .+...+.+++|+|||+++++ +++.++
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~-~~~~~p~~l~~spDG~~l~v------------------~~~~~~ 62 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-PDKFGPGTAMMAPDNRTAYV------------------LNNHYG 62 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC-SSCCSSCEEEECTTSSEEEE------------------EETTTT
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEc-CCCCCcceEEECCCCCEEEE------------------EECCCC
Confidence 46889999999999999999999999877655543 33455778999998877764 566789
Q ss_pred cEEEEeCCCCeEEeeecccCCC----ccEEEEEEccCCCEEEEEe------------CCCcEEEEEcCCCeeEEEeecC
Q psy15157 265 DIKIWDGVSSKCVATFSKAHDG----AEISSLTFTRNGKYLLSSG------------KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~~~~~----~~v~~i~~~~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.|++||+.+++.+..+...... ..+..++|+|||+++++++ .++.+.+||..+++....+..+
T Consensus 63 ~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 141 (346)
T d1jmxb_ 63 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 141 (346)
T ss_dssp EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred cEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEee
Confidence 9999999999988776532211 1256789999999998765 4778999999988766555443
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.15 E-value=4.3e-09 Score=87.57 Aligned_cols=177 Identities=14% Similarity=0.086 Sum_probs=121.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.+..++++|||+++++...+++|..|+... . ...+......+.+++|.++|+++++...+
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-------------------~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~ 88 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDG-------------------N-QQIHATVEGKVSGLAFTSNGDLVATGWNA 88 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTC-------------------C-EEEEEECSSEEEEEEECTTSCEEEEEECT
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCCC-------------------C-EEEEEcCCCCcceEEEcCCCCeEEEecCC
Confidence 578899999999999999999988887642 1 23344455778999999999999998888
Q ss_pred CcEEEEEcCCCccc-cceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcC---------------------------
Q psy15157 201 KTVKMFDYSKSSVR-KAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSS--------------------------- 252 (344)
Q Consensus 201 g~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~--------------------------- 252 (344)
+.+..|+....... ..+...........+.+.++|+++++.+.++.+..+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 168 (302)
T d2p4oa1 89 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 168 (302)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred ceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccc
Confidence 99988887654321 11222234456788999999988887766666655411
Q ss_pred -----CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 253 -----DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 253 -----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
.+.++++.+..+.|..++.....................++++++|++.++...++.|..++...
T Consensus 169 gi~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G 238 (302)
T d2p4oa1 169 GLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR 238 (302)
T ss_dssp EEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred cccccCCceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCC
Confidence 22345556667777777765543221111001112356799999999888888899999997743
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.09 E-value=6.4e-10 Score=98.66 Aligned_cols=154 Identities=12% Similarity=0.134 Sum_probs=103.5
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeC----
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSK---- 199 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---- 199 (344)
.+.|.++++++.. .|+.+.+||+.++....... -..+..|...|.++.|+||++.|+.++.
T Consensus 21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~-------------~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~ 85 (470)
T d2bgra1 21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLE-------------NSTFDEFGHSINDYSISPDGQFILLEYNYVKQ 85 (470)
T ss_dssp CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEEC-------------TTTTTTSSSCCCEEEECTTSSEEEEEEEEEEC
T ss_pred CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEc-------------hhhhhhccCccceeEECCCCCEEEEEECCcce
Confidence 3578888887764 47889999997643211100 0133456678999999999998887753
Q ss_pred -----CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 200 -----DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 200 -----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
++.+.+||+.+++... ...+...+..+.|+|+|++++.. .++.+++|+..++
T Consensus 86 ~r~s~~~~~~l~d~~~~~~~~---l~~~~~~~~~~~~SPDG~~ia~~--------------------~~~~l~~~~~~~g 142 (470)
T d2bgra1 86 WRHSYTASYDIYDLNKRQLIT---EERIPNNTQWVTWSPVGHKLAYV--------------------WNNDIYVKIEPNL 142 (470)
T ss_dssp SSSCEEEEEEEEETTTTEECC---SSCCCTTEEEEEECSSTTCEEEE--------------------ETTEEEEESSTTS
T ss_pred eeeccCceEEEEECCCCcccc---cccCCccccccccccCcceeeEe--------------------ecccceEEECCCC
Confidence 5778999999876432 33456678899999988877742 3556777887777
Q ss_pred eEEeeecccCC----------------CccEEEEEEccCCCEEEEEeCCCc-EEEEEc
Q psy15157 275 KCVATFSKAHD----------------GAEISSLTFTRNGKYLLSSGKDSL-VKLWEL 315 (344)
Q Consensus 275 ~~~~~~~~~~~----------------~~~v~~i~~~~~~~~l~s~~~dg~-i~vwd~ 315 (344)
+.......... ......+.|+|||++|+....|.. +..|.+
T Consensus 143 ~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred ceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence 65543321111 112456789999999998865533 554443
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=2.6e-07 Score=74.77 Aligned_cols=201 Identities=15% Similarity=0.112 Sum_probs=115.5
Q ss_pred eEEecCCCceEEEEECCCCCEEEEEeCCC---eEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcC
Q psy15157 113 AYVTSHKSPCRAGAFSIDGQLCATGSVDA---SIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHP 189 (344)
Q Consensus 113 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 189 (344)
..+..+...+..-+|||||+.||-..... .+.+.+.. ......+..+.+......|+|
T Consensus 32 ~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~sp 92 (269)
T d2hqsa1 32 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA-------------------NGAVRQVASFPRHNGAPAFSP 92 (269)
T ss_dssp EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-------------------TCCEEEEECCSSCEEEEEECT
T ss_pred EEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecc-------------------cCceeEEeeeecccccceecC
Confidence 34556778889999999999998665433 34444443 222345556778888999999
Q ss_pred CCCEEEEEeC-CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEE-------------------
Q psy15157 190 SAPILASGSK-DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLR------------------- 248 (344)
Q Consensus 190 ~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~------------------- 248 (344)
++..++.... ++...++........ ...............+++++..++..+ .++...
T Consensus 93 dg~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ 171 (269)
T d2hqsa1 93 DGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGS 171 (269)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSS
T ss_pred CCCeeeEeeecCCccceeeccccccc-ceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccc
Confidence 9997765543 344333333222111 111112222233445555555444332 222222
Q ss_pred -----EEcCCCCEEEEEeCCC---cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC---CCcEEEEEcCC
Q psy15157 249 -----LYSSDGRIYCSGSKDG---DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK---DSLVKLWELSS 317 (344)
Q Consensus 249 -----~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~---dg~i~vwd~~~ 317 (344)
.|+|++..++..+.++ .|.+.|...+...... .. .......|+|||++|+-.+. ...|++|++..
T Consensus 172 ~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~--~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg 247 (269)
T d2hqsa1 172 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS--ST--FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 247 (269)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC--CS--SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred cccccccccccceeEEEeecCCceeeeEeecccccceEee--cC--ccccceEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 2588999888766654 4555666665543222 11 23567899999999875443 34689999977
Q ss_pred CeeEEEeecCCCcCceeeeeeec
Q psy15157 318 ARCLIAYTGAGSMGQQFELTLTV 340 (344)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~ 340 (344)
+... .+... .+......++|
T Consensus 248 ~~~~-~lt~~--~g~~~~p~WSP 267 (269)
T d2hqsa1 248 RFKA-RLPAT--DGQVKFPAWSP 267 (269)
T ss_dssp CCEE-ECCCS--SSEEEEEEECC
T ss_pred CCEE-EEeCC--CCcEEeEEeCC
Confidence 6654 44433 23334555654
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.96 E-value=6.1e-07 Score=73.29 Aligned_cols=199 Identities=11% Similarity=0.161 Sum_probs=123.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec------CCcCCeEEEEEcCCCC-E
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY------DHIEEVTCLEFHPSAP-I 193 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~-~ 193 (344)
..+.++++++|+++++-..+..|++||.+.. .+..+. +....-..+++.++.. .
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~G~-------------------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 84 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-------------------FKFQFGECGKRDSQLLYPNRVAVVRNSGDI 84 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTSC-------------------EEEEECCBSSSTTCBSSEEEEEEETTTTEE
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCCCC-------------------EEEEecccCCCccccccccccccccccccc
Confidence 4689999999998888778889999997521 111111 1112234455555433 3
Q ss_pred EEE-EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE----------------------
Q psy15157 194 LAS-GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY---------------------- 250 (344)
Q Consensus 194 l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~---------------------- 250 (344)
+++ .+.++.|..++.. +.....+. .........+++.++|.++++....+.+.++
T Consensus 85 ~~~~~~~~~~i~~~~~~-g~~~~~~~-~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i 162 (279)
T d1q7fa_ 85 IVTERSPTHQIQIYNQY-GQFVRKFG-ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGV 162 (279)
T ss_dssp EEEECGGGCEEEEECTT-SCEEEEEC-TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEE
T ss_pred ceeccCCcccccccccc-ccceeecC-CCcccccceeccccCCcEEEEeeccceeeEeccCCceeeccccccccccccee
Confidence 333 3345567777653 32222221 1223446677888888877776666666665
Q ss_pred --cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeC-CCcEEEEEcCCCeeEEEeecC
Q psy15157 251 --SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGK-DSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 251 --~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+++++++++....+.|++||. +++.+..+...........|+++++|+++++-+. ++.|.+|+ .+|+.+.++...
T Consensus 163 ~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~ 240 (279)
T d1q7fa_ 163 VVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESK 240 (279)
T ss_dssp EECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEES
T ss_pred eeccceeEEeeeccccceeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCC
Confidence 345556666666677888885 4555555532222235789999999998777543 45699998 478888888766
Q ss_pred CCcCceeeeeeeccC
Q psy15157 328 GSMGQQFELTLTVDA 342 (344)
Q Consensus 328 ~~~~~~~~~~~~~~~ 342 (344)
........+.+.+|+
T Consensus 241 ~~~~~p~~vav~~dG 255 (279)
T d1q7fa_ 241 VKHAQCFDVALMDDG 255 (279)
T ss_dssp SCCSCEEEEEEETTT
T ss_pred CCCCCEeEEEEeCCC
Confidence 555555666666554
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.94 E-value=1.4e-09 Score=94.11 Aligned_cols=176 Identities=10% Similarity=0.081 Sum_probs=120.1
Q ss_pred cCCCceEEEEECCCCCEEEEE-eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe-cCCcCCeEEEEEcCCCC--
Q psy15157 117 SHKSPCRAGAFSIDGQLCATG-SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL-YDHIEEVTCLEFHPSAP-- 192 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-- 192 (344)
.|.-......++|||++|++. ..+.+|.++|+.++ +....+ -.+...+..++|+|+++
T Consensus 69 ~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~------------------k~~~ii~iP~g~gphgi~~spdg~t~ 130 (441)
T d1qnia2 69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIM------------------KTDKITHIPNVQAIHGLRLQKVPKTN 130 (441)
T ss_dssp BCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTT------------------EEEEEEECTTCCCEEEEEECCSSBCC
T ss_pred ccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCC------------------cEeeEEecCCCCCccceEEeccCCEE
Confidence 344556666678999988655 46789999999754 223333 24567789999999988
Q ss_pred EEEEEeCCC-----------------cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCE---------
Q psy15157 193 ILASGSKDK-----------------TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV--------- 246 (344)
Q Consensus 193 ~l~s~~~dg-----------------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--------- 246 (344)
+++..+.+. .+..+|..+.+....+.. ...+..+.++|+|+++++.+.+..
T Consensus 131 YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v---~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t 207 (441)
T d1qnia2 131 YVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIV---DGNLDNTDADYTGKYATSTCYNSERAVDLAGTM 207 (441)
T ss_dssp EEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEE---SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHT
T ss_pred EEEeccCCcccccCcccccccccccceEEeecCccceeeEEEec---CCCccceEECCCCCEEEEEecCCCceEEEeccC
Confidence 444444332 234477766554433332 234677899999999998875431
Q ss_pred ------EEEE--------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEE-EEeCCCcEE
Q psy15157 247 ------LRLY--------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLL-SSGKDSLVK 311 (344)
Q Consensus 247 ------i~~~--------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~dg~i~ 311 (344)
+.+. .++|+++.. +.++.+.+++....+.+..+..+. ....+.++|||++++ ++..+++|.
T Consensus 208 ~~~~d~i~v~n~p~~~~~~~dGk~~~v-~~~~v~vvd~~~~~~v~~~IPvgk---sPhGv~vSPDGkyl~~~~~~~~tvs 283 (441)
T d1qnia2 208 RNDRDWVVVFNVERIAAAVKAGNFKTI-GDSKVPVVDGRGESEFTRYIPVPK---NPHGLNTSPDGKYFIANGKLSPTVS 283 (441)
T ss_dssp CSSBCEEEEEEHHHHHHHHHTTCCBCC-TTCCCCEEECSSSCSSEEEECCBS---SCCCEEECTTSCEEEEECTTSSBEE
T ss_pred cceEEEEEeCCccceEEEecCCCEEEe-CCCCcEEEEcccCCceEEEEeCCC---CccCceECCCCCEEEEeCCcCCcEE
Confidence 2222 678887755 456788888877777777765332 357799999999875 567899999
Q ss_pred EEEcCC
Q psy15157 312 LWELSS 317 (344)
Q Consensus 312 vwd~~~ 317 (344)
+||+.+
T Consensus 284 v~d~~k 289 (441)
T d1qnia2 284 VIAIDK 289 (441)
T ss_dssp EEEGGG
T ss_pred EEEeeh
Confidence 999865
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.90 E-value=3.6e-08 Score=83.96 Aligned_cols=141 Identities=6% Similarity=-0.117 Sum_probs=96.8
Q ss_pred cCCcCCeEEEEEcCCCCEEEEE-----eCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe--------
Q psy15157 176 YDHIEEVTCLEFHPSAPILASG-----SKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-------- 242 (344)
Q Consensus 176 ~~h~~~v~~~~~~~~~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------- 242 (344)
..+.+++.+++++|+++.++.. +.++.|.+||..+++....+. .+ ....++|+|+|++++++.
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~--~~--~~~~~a~SpDG~~l~va~~~~~~~~~ 92 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVN--GG--FLPNPVAAHSGSEFALASTSFSRIAK 92 (373)
T ss_pred ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEe--CC--CCccEEEcCCCCEEEEEeecCCcccc
Confidence 4578889999999999977654 234679999999987655433 22 233689999999999875
Q ss_pred --CCCEEEEE------------------------------cCCCCEEEEE--eCCCcEEEEeCCCCeEEeeecccCCCcc
Q psy15157 243 --DHFVLRLY------------------------------SSDGRIYCSG--SKDGDIKIWDGVSSKCVATFSKAHDGAE 288 (344)
Q Consensus 243 --~~~~i~~~------------------------------~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 288 (344)
.++.+.+| +++++.++.. ..++.+.+|+....+...... .
T Consensus 93 ~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------~ 166 (373)
T d2madh_ 93 GKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS------S 166 (373)
T ss_pred cccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec------c
Confidence 35677777 2334433222 223455566655554433322 2
Q ss_pred EEEEEEccCCCEE-EEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 289 ISSLTFTRNGKYL-LSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 289 v~~i~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
..++.++|+|+.+ ++.+.|+.+.+|+..+++.......
T Consensus 167 ~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~ 205 (373)
T d2madh_ 167 PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVG 205 (373)
T ss_pred ceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEee
Confidence 5678899998765 6788999999999998887766543
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.90 E-value=4e-07 Score=73.60 Aligned_cols=178 Identities=10% Similarity=0.109 Sum_probs=116.4
Q ss_pred CCCceEEEEECCCCCEEEEE-eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATG-SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
+......++++++|++.++. +..+.+..++.... ........+ ......+++.+++.++++
T Consensus 12 ~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~-----------------~~~~~~~~~-~~~p~gvav~~~g~i~v~ 73 (260)
T d1rwia_ 12 FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGST-----------------GTTVLPFNG-LYQPQGLAVDGAGTVYVT 73 (260)
T ss_dssp SCCCEEEEEECTTCCEEEEECSSSCEEEEEC---------------------CEEECCCCS-CCSCCCEEECTTCCEEEE
T ss_pred CcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCc-----------------eEEEeccCC-ccCceEEEEcCCCCEEEe
Confidence 34456899999999966654 45577777766421 111111111 223567899999998888
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCC
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSD 253 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~ 253 (344)
....+.+++++-.+.... .. .........++++++|+++++-.....+..+ +++
T Consensus 74 d~~~~~i~~~~~~~~~~~--~~-~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~ 150 (260)
T d1rwia_ 74 DFNNRVVTLAAGSNNQTV--LP-FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS 150 (260)
T ss_dssp ETTTEEEEECTTCSCCEE--CC-CCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTT
T ss_pred eeeeceeeeeeeccceee--ee-eeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCC
Confidence 777777777665443222 11 2223457889999999887766555555554 578
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSA 318 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~ 318 (344)
|+++++...++.|..+|........ +....- .....++++++|+++++....+.|..++....
T Consensus 151 g~~~v~~~~~~~i~~~d~~~~~~~~-~~~~~~-~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~ 213 (260)
T d1rwia_ 151 GNVYVTDTDNNRVVKLEAESNNQVV-LPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 213 (260)
T ss_dssp CCEEEEEGGGTEEEEECTTTCCEEE-CCCSSC-CSEEEEEECTTCCEEEEETTTTEEEEECTTCS
T ss_pred CCEeeeccccccccccccccceeee-eecccc-CCCccceeeeeeeeeeeecCCCEEEEEeCCCC
Confidence 8888888888889999977654332 221222 34789999999998888888888888876544
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.89 E-value=2.7e-07 Score=78.57 Aligned_cols=172 Identities=6% Similarity=0.035 Sum_probs=102.4
Q ss_pred CceEEEEECCCCCEEEEEeC-CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEE--ecCCcCCeEEEEEcCCCCEEE-
Q psy15157 120 SPCRAGAFSIDGQLCATGSV-DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRT--LYDHIEEVTCLEFHPSAPILA- 195 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~- 195 (344)
..+.++.|+|+|+++++++. ...|.+|+..... ....... ..........++|+|++++++
T Consensus 145 ~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g---------------~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv 209 (365)
T d1jofa_ 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASG---------------EVELVGSVDAPDPGDHPRWVAMHPTGNYLYA 209 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS---------------CEEEEEEEECSSTTCCEEEEEECTTSSEEEE
T ss_pred CcceEEEECCCCCEEEEeeCCCCEEEEEEccCCC---------------ceeeccceeecCCCCceEEEEECCCCceEEE
Confidence 34789999999998888764 3578888764210 0111111 123345678999999999764
Q ss_pred EEeCCCcEEEEEcCCCccccceeee-----------------ccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEE
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTI-----------------QESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYC 258 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~ 258 (344)
+.-.+++|.+|++............ ........+.++|+|++++++.... +
T Consensus 210 ~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~-------~----- 277 (365)
T d1jofa_ 210 LMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN-------K----- 277 (365)
T ss_dssp EETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES-------S-----
T ss_pred eccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccC-------C-----
Confidence 4556899999998775432211110 1112345678888888877653100 0
Q ss_pred EEeCCCcEEEEeCCCCeEEe----eecccCCCccEEEEEEcc-CCCEEEEE-eCCCcEEEEEcCCCe
Q psy15157 259 SGSKDGDIKIWDGVSSKCVA----TFSKAHDGAEISSLTFTR-NGKYLLSS-GKDSLVKLWELSSAR 319 (344)
Q Consensus 259 ~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~v~~i~~~~-~~~~l~s~-~~dg~i~vwd~~~~~ 319 (344)
....+.|..|+......+. .......+....+++++| +|++|+++ ..++.|.+|+++...
T Consensus 278 -~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~ 343 (365)
T d1jofa_ 278 -FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp -TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred -CccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence 0112235556654321111 111112233467799998 89988776 467899999886554
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.82 E-value=5.1e-07 Score=73.74 Aligned_cols=160 Identities=14% Similarity=0.274 Sum_probs=104.8
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEe--cCCcCCeEEEEEcCCCCEEEE
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTL--YDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s 196 (344)
......+++.++|+++++....+.+.+++.+ ...+..+ ..+......+++.++++++++
T Consensus 113 ~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-------------------g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~ 173 (279)
T d1q7fa_ 113 LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-------------------GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 173 (279)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTT-------------------SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred ccccceeccccCCcEEEEeeccceeeEeccC-------------------CceeecccccccccccceeeeccceeEEee
Confidence 4556778888888877777777777777654 2333333 345667889999999999999
Q ss_pred EeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC-CCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe
Q psy15157 197 GSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD-HFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275 (344)
Q Consensus 197 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 275 (344)
....+.|++||... +....+...........++++++|+.+++-.. +..|.+|+++|++
T Consensus 174 d~~~~~V~~~d~~G-~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~------------------- 233 (279)
T d1q7fa_ 174 DNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL------------------- 233 (279)
T ss_dssp EGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE-------------------
T ss_pred eccccceeeeecCC-ceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCCCE-------------------
Confidence 88899999999754 33333322233445778899998875554322 2344455544443
Q ss_pred EEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 276 CVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 276 ~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
+..+...........+++.++|.+++ ++.+..|++|......
T Consensus 234 -~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~ 275 (279)
T d1q7fa_ 234 -ISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLA 275 (279)
T ss_dssp -EEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCC
T ss_pred -EEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeec
Confidence 33332222223478899999997555 5578999999987653
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.81 E-value=1.2e-05 Score=66.72 Aligned_cols=190 Identities=9% Similarity=0.097 Sum_probs=120.9
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe
Q psy15157 119 KSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS 198 (344)
Q Consensus 119 ~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 198 (344)
...+..++|.++|++.++-...+.|..|+.++ ......+.........++++++|+++++..
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g------------------~~~~~~~~~~~~~p~gla~~~dG~l~va~~ 100 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPET------------------KEIKRPFVSHKANPAAIKIHKDGRLFVCYL 100 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTT------------------CCEEEEEECSSSSEEEEEECTTSCEEEEEC
T ss_pred CcCcEeCEECCCCCEEEEECCCCEEEEEECCC------------------CeEEEEEeCCCCCeeEEEECCCCCEEEEec
Confidence 34557899999999888877889898888753 222333444556678999999999887654
Q ss_pred CC----CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeC---------------CC-EEE----------
Q psy15157 199 KD----KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTD---------------HF-VLR---------- 248 (344)
Q Consensus 199 ~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------~~-~i~---------- 248 (344)
.+ +.+...+.....................+.+.++|++.++... ++ .+.
T Consensus 101 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pn 180 (319)
T d2dg1a1 101 GDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVAN 180 (319)
T ss_dssp TTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEE
T ss_pred CCCccceeEEEEcCCCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceee
Confidence 32 3355555544433222221222345677889999986654321 11 111
Q ss_pred --EEcCCCCEE-EEEeCCCcEEEEeCCCC-eEEe----ee-cccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 249 --LYSSDGRIY-CSGSKDGDIKIWDGVSS-KCVA----TF-SKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 249 --~~~~~~~~l-~~~~~dg~i~iwd~~~~-~~~~----~~-~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
.|+++++.| ++-+..+.|+.||+... .... .. ...........++++.+|++.++....+.|.+||- .|+
T Consensus 181 Gia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~ 259 (319)
T d2dg1a1 181 GIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGY 259 (319)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSC
T ss_pred eeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCc
Confidence 147888754 55566788999987532 1111 11 00111123678999999998888888999999995 789
Q ss_pred eEEEeecC
Q psy15157 320 CLIAYTGA 327 (344)
Q Consensus 320 ~~~~~~~~ 327 (344)
.+..+.-+
T Consensus 260 ~l~~i~~P 267 (319)
T d2dg1a1 260 PIGQILIP 267 (319)
T ss_dssp EEEEEECT
T ss_pred EEEEEeCC
Confidence 88888644
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.79 E-value=4.6e-09 Score=88.92 Aligned_cols=152 Identities=11% Similarity=0.003 Sum_probs=94.3
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASG 197 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 197 (344)
+...+....+++++..++.++.++.+++|++............. .... .............+++++++..++..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~p~~~~~~~~~~d~~~~~~~ 266 (355)
T d2bbkh_ 193 DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEA-----LTEA-ERADGWRPGGWQQVAYHRALDRIYLL 266 (355)
T ss_dssp TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEES-----SCHH-HHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred ecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCC-----cccc-eEeeeeeccceEEEEEeCCCCeEEEE
Confidence 44456667788888889999999999999987532211000000 0000 00000011123457889999877665
Q ss_pred eCC----------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEE
Q psy15157 198 SKD----------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIK 267 (344)
Q Consensus 198 ~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~ 267 (344)
..+ ..|.+||..+++....+. ....+.+++|+|+|+.++ +++++.|+.|+
T Consensus 267 ~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~---~~~~~~~~a~spDG~~~l-----------------~v~~~~d~~i~ 326 (355)
T d2bbkh_ 267 VDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGHEIDSINVSQDEKPLL-----------------YALSTGDKTLY 326 (355)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEECCSSSCEE-----------------EEEETTTTEEE
T ss_pred eccCCceeecCCCCeEEEEeCCCCcEEEEec---CCCCEEEEEEcCCCCeEE-----------------EEEECCCCEEE
Confidence 443 469999999886554433 345578899999876432 23677899999
Q ss_pred EEeCCCCeEEeeecccCCCccEEEEEEccC
Q psy15157 268 IWDGVSSKCVATFSKAHDGAEISSLTFTRN 297 (344)
Q Consensus 268 iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 297 (344)
+||.++++.+.++..... ....+.+.++
T Consensus 327 v~D~~tg~~~~~i~~~G~--~p~~i~~~d~ 354 (355)
T d2bbkh_ 327 IHDAESGEELRSVNQLGH--GPQVITTADM 354 (355)
T ss_dssp EEETTTCCEEEEECCCCS--SCCEEECCCC
T ss_pred EEECCCCCEEEEEeCcCC--CccEEEeCCC
Confidence 999999999988863322 2345554443
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.69 E-value=8.2e-08 Score=81.85 Aligned_cols=159 Identities=7% Similarity=-0.113 Sum_probs=98.1
Q ss_pred CCCceEEEEECCCCCE---EEEEeCCCeEE--EEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 118 HKSPCRAGAFSIDGQL---CATGSVDASIK--ILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~---l~sg~~dg~v~--iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
+.++...++..++++. .++...++... +||.. ..+.+.++..+... .++|+|+|+
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~------------------~~~~~~~~~~~~~~--~~a~spDg~ 77 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAG------------------CGVTLGHSLGAFLS--LAVAGHSGS 77 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETT------------------TTEEEEEEEECTTC--EEEECTTSS
T ss_pred cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCC------------------CCcEEEEEeCCCCC--cceECCCCC
Confidence 4444555556777774 22344556544 55654 34556666655544 589999999
Q ss_pred EEEEEe----------CCCcEEEEEcCCCccccceeeecc-----ccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEE
Q psy15157 193 ILASGS----------KDKTVKMFDYSKSSVRKAHKTIQE-----STFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIY 257 (344)
Q Consensus 193 ~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l 257 (344)
.|+..+ .|+.|.+||..+++....+..... ......++|+|+|++++++
T Consensus 78 ~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va---------------- 141 (368)
T d1mdah_ 78 DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFF---------------- 141 (368)
T ss_dssp CEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEE----------------
T ss_pred EEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEE----------------
Confidence 877654 478899999998876544432111 1122357888877766642
Q ss_pred EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCe
Q psy15157 258 CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSAR 319 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~ 319 (344)
...++.+.+||+.+++.+..+..... ..+ +......+++.+.||.+.+|++..+.
T Consensus 142 --~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~----~~~~~~~~v~~~~Dg~~~~~~~~~~~ 196 (368)
T d1mdah_ 142 --LFGSSAAAGLSVPGASDDQLTKSASC-FHI----HPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp --ECSSSCEEEEEETTTEEEEEEECSSC-CCC----EEEETTEEECCCCTTSCEEEECCSSC
T ss_pred --eCCCCeEEEEECCCCcEeEEeeccCc-ceE----ccCCCceEEEEcCCCCEEEEEecCCc
Confidence 23568999999999998887764332 111 11233456666777777777776543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.69 E-value=4.3e-06 Score=69.34 Aligned_cols=176 Identities=10% Similarity=0.117 Sum_probs=109.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCC-cCCeEEEEEcCCCCEEEEEeC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDH-IEEVTCLEFHPSAPILASGSK 199 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~ 199 (344)
....++|.++++.++++...+.|...+.+......... ...+. -...+.+++.++|.+.++-..
T Consensus 72 ~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~---------------~~~g~~~~~pndl~~d~~G~lyvtd~~ 136 (314)
T d1pjxa_ 72 IPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKK---------------DSEGRRMQGCNDCAFDYEGNLWITAPA 136 (314)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSB---------------CTTSCBCBCCCEEEECTTSCEEEEECB
T ss_pred cceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEec---------------cccccccCCCcEEEECCCCCEEEecCc
Confidence 36789999999988888777778888876422111000 00001 113578899999988776432
Q ss_pred ---------------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCC----EEEEE-eCCCEEEEE---------
Q psy15157 200 ---------------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGD----YMVVG-TDHFVLRLY--------- 250 (344)
Q Consensus 200 ---------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~l~~~-~~~~~i~~~--------- 250 (344)
+|.|..++.. ++.... ...-...+.++|+|+++ +|+++ +..+.|..|
T Consensus 137 ~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~---~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~ 212 (314)
T d1pjxa_ 137 GEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV---DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE 212 (314)
T ss_dssp CBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE---EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE
T ss_pred cCcccccccceeccCCceEEEEeec-CceeEe---eCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccc
Confidence 2344444432 222111 11223346688888764 44443 444555443
Q ss_pred ---------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEE-EEEeCCC
Q psy15157 251 ---------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYL-LSSGKDS 308 (344)
Q Consensus 251 ---------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg 308 (344)
+.+|+++++....+.|.+||...++....+.... ...++++|.|+++.| ++.+.+|
T Consensus 213 ~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~--~~~t~~afg~d~~~lyVt~~~~g 290 (314)
T d1pjxa_ 213 NKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF--EKPSNLHFKPQTKTIFVTEHENN 290 (314)
T ss_dssp EEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS--SCEEEEEECTTSSEEEEEETTTT
T ss_pred eeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCC--CCEEEEEEeCCCCEEEEEECCCC
Confidence 5678888888888999999988887666554332 358899999999754 5666778
Q ss_pred cEEEEEcCC
Q psy15157 309 LVKLWELSS 317 (344)
Q Consensus 309 ~i~vwd~~~ 317 (344)
.|...++..
T Consensus 291 ~i~~~~~~~ 299 (314)
T d1pjxa_ 291 AVWKFEWQR 299 (314)
T ss_dssp EEEEEECSS
T ss_pred cEEEEECCC
Confidence 888877643
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.67 E-value=7.3e-06 Score=67.44 Aligned_cols=175 Identities=13% Similarity=0.077 Sum_probs=113.0
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCce-EEEecCCcCCeEEEEEcCCCC
Q psy15157 114 YVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPV-IRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 114 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.+......+.+++|+++|+++++...++.+.+|+.... .... ...........+.+++.++++
T Consensus 62 ~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~n~i~~~~~g~ 125 (302)
T d2p4oa1 62 IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS----------------DGTVETLLTLPDAIFLNGITPLSDTQ 125 (302)
T ss_dssp EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT----------------TSCEEEEEECTTCSCEEEEEESSSSE
T ss_pred EEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccc----------------ccceeeccccCCccccceeEEccCCC
Confidence 34566788999999999999999988888988887531 1111 111123455688999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCcccccee--------eeccccceEEEEEecCCCEEEEEeCCCEEEEE--------------
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHK--------TIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-------------- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-------------- 250 (344)
++++-+.++.+..+|...+....... ..........+.++. +..+++.+..+.+..+
T Consensus 126 ~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 204 (302)
T d2p4oa1 126 YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIF 204 (302)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEE
T ss_pred EEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCCCCeEEeccccccccccccccc
Confidence 99988888999888877653211110 001112345555543 2333444455555543
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCCCCeE-EeeecccCCCccEEEEEE---ccCCCEEEEEeCC
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGVSSKC-VATFSKAHDGAEISSLTF---TRNGKYLLSSGKD 307 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~i~~---~~~~~~l~s~~~d 307 (344)
+++|+++++...++.|..++...... +....... ...++++| .+|++.|+.++..
T Consensus 205 ~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~--~~pt~vafg~~~~D~~~Lyvtt~~ 274 (302)
T d2p4oa1 205 VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGV--IGSTAVAFGQTEGDCTAIYVVTNG 274 (302)
T ss_dssp EESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTC--TTEEEEEECCSTTTTTEEEEEECT
T ss_pred cCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCC--CCceEEEEcCCCCCCCEEEEECCC
Confidence 67889888888889999998654322 22222222 34789999 6788888776543
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.65 E-value=1.9e-06 Score=69.43 Aligned_cols=172 Identities=8% Similarity=0.053 Sum_probs=109.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
....++++++|+++++....+.+++++-.+. ..... ........++++.++++++++-..+
T Consensus 58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~------------------~~~~~-~~~~~~p~~iavd~~g~i~v~d~~~ 118 (260)
T d1rwia_ 58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNN------------------QTVLP-FDGLNYPEGLAVDTQGAVYVADRGN 118 (260)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSC------------------CEECC-CCSCCSEEEEEECTTCCEEEEEGGG
T ss_pred CceEEEEcCCCCEEEeeeeeceeeeeeeccc------------------eeeee-eeeeeecccccccccceeEeecccc
Confidence 4678899999998888777666666553321 11111 1223457899999999988877667
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEE-----------------------cCCCCEE
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLY-----------------------SSDGRIY 257 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~-----------------------~~~~~~l 257 (344)
..+..++....... .. ..........++++++|+.+++...++.+..+ +++|+++
T Consensus 119 ~~~~~~~~~~~~~~-~~-~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~ 196 (260)
T d1rwia_ 119 NRVVKLAAGSKTQT-VL-PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVY 196 (260)
T ss_dssp TEEEEECTTCSSCE-EC-CCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEE
T ss_pred ccccccccccceee-ee-eecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeee
Confidence 77877776553321 11 11223345778999999987777777777766 4566666
Q ss_pred EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy15157 258 CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWEL 315 (344)
Q Consensus 258 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~ 315 (344)
++....+.|..++....... .+.... ......|+++++|+++++-..++.|+.++.
T Consensus 197 vsd~~~~~i~~~~~~~~~~~-~~~~~~-~~~P~~i~~d~~g~l~vad~~~~rI~~i~~ 252 (260)
T d1rwia_ 197 VTEHNTNQVVKLLAGSTTST-VLPFTG-LNTPLAVAVDSDRTVYVADRGNDRVVKLTS 252 (260)
T ss_dssp EEETTTTEEEEECTTCSCCE-ECCCCS-CCCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred eeecCCCEEEEEeCCCCeEE-EEccCC-CCCeEEEEEeCCCCEEEEECCCCEEEEEeC
Confidence 66666666776665443221 111111 134689999999988777666776665544
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.54 E-value=8.6e-07 Score=77.87 Aligned_cols=184 Identities=8% Similarity=0.074 Sum_probs=108.3
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec-CCcCCeEEEEEcCCCCEEEEEe------
Q psy15157 126 AFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY-DHIEEVTCLEFHPSAPILASGS------ 198 (344)
Q Consensus 126 ~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~------ 198 (344)
.|.+++.++.. ..+|.|.+||+.+.... .+.... ...-.+....|+||++.++...
T Consensus 23 ~W~~~~~~~~~-~~~g~i~~~~~~~~~~~----------------~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~ 85 (465)
T d1xfda1 23 KWISDTEFIYR-EQKGTVRLWNVETNTST----------------VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIY 85 (465)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCE----------------EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred EEeCCCcEEEE-eCCCcEEEEECCCCCEE----------------EEEcCccccccccceeEECCCCCeEEEEEccccee
Confidence 35566665543 45778999998653211 111111 1223566778999999776653
Q ss_pred ---CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCC------------------------------
Q psy15157 199 ---KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHF------------------------------ 245 (344)
Q Consensus 199 ---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~------------------------------ 245 (344)
..+.+.++|+.++..............+....|+|+|+.++......
T Consensus 86 r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~ 165 (465)
T d1xfda1 86 QHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDW 165 (465)
T ss_dssp SSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCH
T ss_pred EeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccch
Confidence 35788999999876533322222233455578999998887543211
Q ss_pred ----------EEEEEcCCCCEEEEEeCC-C---------------------------------cEEEEeCCCCeEEeeec
Q psy15157 246 ----------VLRLYSSDGRIYCSGSKD-G---------------------------------DIKIWDGVSSKCVATFS 281 (344)
Q Consensus 246 ----------~i~~~~~~~~~l~~~~~d-g---------------------------------~i~iwd~~~~~~~~~~~ 281 (344)
....|+|||++||....| . .+.++|+.++.......
T Consensus 166 vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~ 245 (465)
T d1xfda1 166 LYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM 245 (465)
T ss_dssp HHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC
T ss_pred hhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEe
Confidence 112279999999876432 1 24455554443211111
Q ss_pred c----cCCCccEEEEEEccCCCEEEEEeC-C---CcEEEEEcCCCeeEEEeec
Q psy15157 282 K----AHDGAEISSLTFTRNGKYLLSSGK-D---SLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 282 ~----~~~~~~v~~i~~~~~~~~l~s~~~-d---g~i~vwd~~~~~~~~~~~~ 326 (344)
. ......+..+.|++++++++.... + ..|.++|..+|++...+..
T Consensus 246 ~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e 298 (465)
T d1xfda1 246 PPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED 298 (465)
T ss_dssp CCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE
T ss_pred ccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEE
Confidence 0 011124788999999987666432 2 3588899999987766654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.53 E-value=3.3e-07 Score=78.92 Aligned_cols=169 Identities=11% Similarity=0.063 Sum_probs=97.8
Q ss_pred EEEEEeCCCeEEEEEcCCccccccCCCC--C--CcCCC--------CCCceEEEecCCcCCeEEEEEcCCCCEEEE-EeC
Q psy15157 133 LCATGSVDASIKILDVDRMLAKSSMESS--E--PQNDQ--------QGHPVIRTLYDHIEEVTCLEFHPSAPILAS-GSK 199 (344)
Q Consensus 133 ~l~sg~~dg~v~iwd~~~~~~~~~~~~~--~--~~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~ 199 (344)
.++||+.+|.|+||++.++......... . ..... ...........|.-........|||++|+. ...
T Consensus 13 ~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~ 92 (441)
T d1qnia2 13 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKA 92 (441)
T ss_dssp EEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCC
Confidence 3778889999999999876443221110 0 00000 000011112234455566667889997754 457
Q ss_pred CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEE--EeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE
Q psy15157 200 DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV--GTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCV 277 (344)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 277 (344)
++.|.++|+.+.+...... ......+..++|+|+|+.+++ .+.+. +.+ ..++..+-.-.....+..+|..+.+..
T Consensus 93 ~~rVavIDl~t~k~~~ii~-iP~g~gphgi~~spdg~t~YV~~~~~~~-v~~-~~dg~~~~~~~~~~~~~~iD~~t~~v~ 169 (441)
T d1qnia2 93 NTRVARIRLDIMKTDKITH-IPNVQAIHGLRLQKVPKTNYVFCNAEFV-IPQ-PNDGTDFSLDNSYTMFTAIDAETMDVA 169 (441)
T ss_dssp TTEEEEEETTTTEEEEEEE-CTTCCCEEEEEECCSSBCCEEEEEECSC-EES-SCSSSCCCGGGEEEEEEEEETTTCSEE
T ss_pred CCEEEEEECCCCcEeeEEe-cCCCCCccceEEeccCCEEEEEeccCCc-ccc-cCcccccccccccceEEeecCccceee
Confidence 8899999999987655443 334567888999999885433 22222 111 111111100000124567888888877
Q ss_pred eeecccCCCccEEEEEEccCCCEEEEEeCC
Q psy15157 278 ATFSKAHDGAEISSLTFTRNGKYLLSSGKD 307 (344)
Q Consensus 278 ~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 307 (344)
..+.... .+..+.|+|+|+++++.+.+
T Consensus 170 ~qI~v~~---~p~~v~~spdGk~a~vt~~n 196 (441)
T d1qnia2 170 WQVIVDG---NLDNTDADYTGKYATSTCYN 196 (441)
T ss_dssp EEEEESS---CCCCEEECSSSSEEEEEESC
T ss_pred EEEecCC---CccceEECCCCCEEEEEecC
Confidence 7665322 36788999999998877643
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.47 E-value=0.00011 Score=60.53 Aligned_cols=193 Identities=8% Similarity=0.042 Sum_probs=114.6
Q ss_pred CceEEEEECCCCCEEEEEeC-------CCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC
Q psy15157 120 SPCRAGAFSIDGQLCATGSV-------DASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP 192 (344)
Q Consensus 120 ~~v~~~~~s~~~~~l~sg~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 192 (344)
.....++|.++|+++++... +|+|..||..+........ .......+.-..++|.++++
T Consensus 18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~--------------~~~~~~~g~P~Gl~~~~dg~ 83 (314)
T d1pjxa_ 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK--------------PEVNGYGGIPAGCQCDRDAN 83 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC--------------CEETTEECCEEEEEECSSSS
T ss_pred CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEEC--------------CccccCCCcceeEEEeCCCC
Confidence 34677899999997776433 4668888875421110000 00111123457899999999
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeeccc---cceEEEEEecCCCEEEEEeC---------------CCEEEEE----
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQES---TFVRCLSFHPCGDYMVVGTD---------------HFVLRLY---- 250 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~---------------~~~i~~~---- 250 (344)
.++++...+.|...|....... ........ ...+.+.++++|.+.++-.. .+.+..+
T Consensus 84 ~l~vad~~~~i~~~~~~g~~~~-~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg 162 (314)
T d1pjxa_ 84 QLFVADMRLGLLVVQTDGTFEE-IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG 162 (314)
T ss_dssp EEEEEETTTEEEEEETTSCEEE-CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS
T ss_pred EEEEEECCCeEEEEeCCCcEEE-EEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC
Confidence 8887777777888887654321 11111111 13567889999887765321 2233333
Q ss_pred -----------------cCCCC-----EEEEEeCCCcEEEEeCCCCeEE------eeecccCCCccEEEEEEccCCCEEE
Q psy15157 251 -----------------SSDGR-----IYCSGSKDGDIKIWDGVSSKCV------ATFSKAHDGAEISSLTFTRNGKYLL 302 (344)
Q Consensus 251 -----------------~~~~~-----~l~~~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~v~~i~~~~~~~~l~ 302 (344)
++++. ++++-+..+.|..||+.....+ ..+..... .....++++.+|++.+
T Consensus 163 ~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~pdGiavD~~GnlyV 241 (314)
T d1pjxa_ 163 QMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE-GGADGMDFDEDNNLLV 241 (314)
T ss_dssp CEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS-CEEEEEEEBTTCCEEE
T ss_pred ceeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEcccccc-ccceeeEEecCCcEEE
Confidence 33332 3444455666777765432111 12221122 2367899999999888
Q ss_pred EEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 303 SSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 303 s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
+....+.|.+||..+++.+..+..+.
T Consensus 242 a~~~~g~I~~~dp~~g~~~~~i~~p~ 267 (314)
T d1pjxa_ 242 ANWGSSHIEVFGPDGGQPKMRIRCPF 267 (314)
T ss_dssp EEETTTEEEEECTTCBSCSEEEECSS
T ss_pred EEcCCCEEEEEeCCCCEEEEEEECCC
Confidence 88788999999998888777776544
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.39 E-value=8.2e-05 Score=62.73 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=73.4
Q ss_pred cCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCccccce---eeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCC
Q psy15157 179 IEEVTCLEFHPSAPILASGSK-DKTVKMFDYSKSSVRKAH---KTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDG 254 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 254 (344)
...+.++.|+|+|++++++.. ...|.+|+.......... .........+.+.|+|+++++++.
T Consensus 144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~------------- 210 (365)
T d1jofa_ 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYAL------------- 210 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEE-------------
T ss_pred CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEe-------------
Confidence 335789999999998777654 457888876543222111 112234567889999998887653
Q ss_pred CEEEEEeCCCcEEEEeCCCCeE--Eee---ec------------ccCCCccEEEEEEccCCCEEEEEeC------CCcEE
Q psy15157 255 RIYCSGSKDGDIKIWDGVSSKC--VAT---FS------------KAHDGAEISSLTFTRNGKYLLSSGK------DSLVK 311 (344)
Q Consensus 255 ~~l~~~~~dg~i~iwd~~~~~~--~~~---~~------------~~~~~~~v~~i~~~~~~~~l~s~~~------dg~i~ 311 (344)
.-.++.|.+|+...+.. +.. .. ..........+.++|||++|+++.. .+.|.
T Consensus 211 -----~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~ 285 (365)
T d1jofa_ 211 -----MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIA 285 (365)
T ss_dssp -----ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEE
T ss_pred -----ccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEE
Confidence 33455566665543321 111 00 0111124667899999999988742 22377
Q ss_pred EEEcCCC
Q psy15157 312 LWELSSA 318 (344)
Q Consensus 312 vwd~~~~ 318 (344)
.|++...
T Consensus 286 ~~~~~~~ 292 (365)
T d1jofa_ 286 GFKLRDC 292 (365)
T ss_dssp EEEECTT
T ss_pred EEEecCC
Confidence 7777653
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.32 E-value=0.00044 Score=56.89 Aligned_cols=172 Identities=14% Similarity=0.102 Sum_probs=105.6
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCC--CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEec--CCcCCeEEEEEcCC
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATGSVD--ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLY--DHIEEVTCLEFHPS 190 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~ 190 (344)
+.........++|+++|+++++...+ ....++.+.. .......... .-....+.+++.++
T Consensus 77 ~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~----------------~~~~~~~~~~~~~~~~~~nd~~~d~~ 140 (319)
T d2dg1a1 77 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE----------------NGDNLQDIIEDLSTAYCIDDMVFDSK 140 (319)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT----------------TSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred EeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcC----------------CCceeeeeccCCCcccCCcceeEEec
Confidence 34455678899999999988775432 2333444321 1111111111 11335788999999
Q ss_pred CCEEEEEeC------CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEE-eCCCEEEEE-------------
Q psy15157 191 APILASGSK------DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVG-TDHFVLRLY------------- 250 (344)
Q Consensus 191 ~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~i~~~------------- 250 (344)
|++.++... .+.+..++........ . .......+.++|+|+++.|+++ +..+.|..|
T Consensus 141 G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~-~--~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~ 217 (319)
T d2dg1a1 141 GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-I--IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG 217 (319)
T ss_dssp SCEEEEECCCBTTBCCEEEEEECTTSCCEEE-E--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE
T ss_pred cceeecccccccccCcceeEEEecccceeEE-E--eeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceecccc
Confidence 987776432 1335555544332211 1 1223345779999999977665 445566554
Q ss_pred ------------------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccC----CCccEEEEEEccCCCEEEEEeC
Q psy15157 251 ------------------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH----DGAEISSLTFTRNGKYLLSSGK 306 (344)
Q Consensus 251 ------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~i~~~~~~~~l~s~~~ 306 (344)
+.+|+++++....+.|.+||. .++.+..+.... ....+++++|.+++..+++...
T Consensus 218 ~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 218 ATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp EEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred ceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence 567888888888999999995 688777764221 1124789999998877766553
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.29 E-value=5.5e-05 Score=60.74 Aligned_cols=96 Identities=11% Similarity=0.217 Sum_probs=61.3
Q ss_pred EECCC--CCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEe-CCC-
Q psy15157 126 AFSID--GQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGS-KDK- 201 (344)
Q Consensus 126 ~~s~~--~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg- 201 (344)
..||+ |+.+|-.+ +|.|.+.|+.+ .. .+.+..+.+.+...+|||||+.|+-.. .++
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~------------------g~-~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~ 64 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKS------------------GS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSS 64 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTT------------------CC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTT
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCC------------------CC-EEEEecCCCcccCEEECCCCCEEEEEEeeCCC
Confidence 35688 88887664 45677778753 22 344556677788999999999777443 222
Q ss_pred ----cEEEEEcCCCccccceee----eccccceEEEEEecCCCEEEEE
Q psy15157 202 ----TVKMFDYSKSSVRKAHKT----IQESTFVRCLSFHPCGDYMVVG 241 (344)
Q Consensus 202 ----~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~ 241 (344)
.|.+++..+++....... ...........|+|+|+.++..
T Consensus 65 ~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~ 112 (281)
T d1k32a2 65 LNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIST 112 (281)
T ss_dssp CCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred CCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEE
Confidence 377777776654322111 1112345678899999988865
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.28 E-value=0.00014 Score=58.05 Aligned_cols=159 Identities=10% Similarity=0.122 Sum_probs=91.3
Q ss_pred ecCCcCCeEEEEEcCCCCEEEEEeCC-C--cEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-CEEEE-
Q psy15157 175 LYDHIEEVTCLEFHPSAPILASGSKD-K--TVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-FVLRL- 249 (344)
Q Consensus 175 ~~~h~~~v~~~~~~~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~i~~- 249 (344)
+..+...+..-+|||||+.||-...+ + .+.+.+...+... .............|+|+|+.++..... +...+
T Consensus 34 l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~ 110 (269)
T d2hqsa1 34 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLY 110 (269)
T ss_dssp EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee---EEeeeecccccceecCCCCeeeEeeecCCcccee
Confidence 33455668899999999988755443 3 3556666554322 223355667889999999998875432 11111
Q ss_pred -----------------------EcCCCCEEE-EEeCCC--cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEE
Q psy15157 250 -----------------------YSSDGRIYC-SGSKDG--DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLS 303 (344)
Q Consensus 250 -----------------------~~~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s 303 (344)
|++++..++ +...+| .|.+.+...+....... .. .......|+|+++.++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~--~~-~~~~~~~~spdg~~~~~ 187 (269)
T d2hqsa1 111 VMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW--EG-SQNQDADVSSDGKFMVM 187 (269)
T ss_dssp EEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC--SS-SEEEEEEECTTSSEEEE
T ss_pred ecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeec--cc-ccccccccccccceeEE
Confidence 244444433 333444 35555666554433322 22 35778899999999887
Q ss_pred EeCCC-c--EEEEEcCCCeeEEEeecCCCcCceeeeeeeccCC
Q psy15157 304 SGKDS-L--VKLWELSSARCLIAYTGAGSMGQQFELTLTVDAD 343 (344)
Q Consensus 304 ~~~dg-~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (344)
.+.++ . |.+.+..++.. ...... +......+++|++
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~-~~~~~~---~~~~~p~~SPDG~ 226 (269)
T d2hqsa1 188 VSSNGGQQHIAKQDLATGGV-QVLSST---FLDETPSLAPNGT 226 (269)
T ss_dssp EEECSSCEEEEEEETTTCCE-EECCCS---SSCEEEEECTTSS
T ss_pred EeecCCceeeeEeecccccc-eEeecC---ccccceEECCCCC
Confidence 65443 3 45555554443 222222 2234456777764
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.96 E-value=0.0028 Score=51.26 Aligned_cols=183 Identities=11% Similarity=0.034 Sum_probs=113.0
Q ss_pred EEEEECC-CCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCC
Q psy15157 123 RAGAFSI-DGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDK 201 (344)
Q Consensus 123 ~~~~~s~-~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 201 (344)
-+..|++ ++++..+=-..+.|.-||..++. ...+ .....+.++++.+++.++++ +.+
T Consensus 21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~-------------------~~~~-~~~~~~~~i~~~~dg~l~va-~~~- 78 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNILERELHELHLASGR-------------------KTVH-ALPFMGSALAKISDSKQLIA-SDD- 78 (295)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTE-------------------EEEE-ECSSCEEEEEEEETTEEEEE-ETT-
T ss_pred eCCeEECCCCEEEEEECCCCEEEEEECCCCe-------------------EEEE-ECCCCcEEEEEecCCCEEEE-EeC-
Confidence 4456776 44455454467888888876421 1111 23456789999988877665 444
Q ss_pred cEEEEEcCCCccccceeeec--cccceEEEEEecCCCEEEEEeC--------------CCEEEE------------EcCC
Q psy15157 202 TVKMFDYSKSSVRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGTD--------------HFVLRL------------YSSD 253 (344)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--------------~~~i~~------------~~~~ 253 (344)
.|.++|..+++......... ....++.+.+.|+|++.+.... ++.+.. |+++
T Consensus 79 gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d 158 (295)
T d2ghsa1 79 GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPD 158 (295)
T ss_dssp EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTT
T ss_pred ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCC
Confidence 58899998876433222111 2335788899999987665321 222221 3777
Q ss_pred CCEE-EEEeCCCcEEEEeCCCC------eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q psy15157 254 GRIY-CSGSKDGDIKIWDGVSS------KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTG 326 (344)
Q Consensus 254 ~~~l-~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 326 (344)
++.+ ++-+..+.|..|++... +...........+....++++.+|++.++.-..+.|..||- .|+.+..+.-
T Consensus 159 ~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~l 237 (295)
T d2ghsa1 159 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV 237 (295)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred CceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecC
Confidence 7754 45566788888876421 11111111112235789999999998777767888999994 7888888875
Q ss_pred CC
Q psy15157 327 AG 328 (344)
Q Consensus 327 ~~ 328 (344)
+.
T Consensus 238 P~ 239 (295)
T d2ghsa1 238 PG 239 (295)
T ss_dssp SC
T ss_pred CC
Confidence 43
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=2.3e-05 Score=68.59 Aligned_cols=128 Identities=9% Similarity=0.074 Sum_probs=82.8
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCCccccceeeec-cccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC
Q psy15157 186 EFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKTIQ-ESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDG 264 (344)
Q Consensus 186 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg 264 (344)
.|.+++.++.. ..+|.|.+||+.+++....+.... ....+....|+||+++++....-.. +|. -+..+
T Consensus 23 ~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~--~~r--------~s~~~ 91 (465)
T d1xfda1 23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP--IYQ--------HSYTG 91 (465)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC--CSS--------SCCCS
T ss_pred EEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccc--eeE--------eeccc
Confidence 57888766543 557899999998875432221111 1224566789999998877653211 121 13467
Q ss_pred cEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 265 DIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 265 ~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
.+.++|+.++..............+....|||||+.|+-.. ++.|++.+..++..++...
T Consensus 92 ~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~ 151 (465)
T d1xfda1 92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVS 151 (465)
T ss_dssp EEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEEC
T ss_pred cEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEec
Confidence 88999999887544322222223466689999999988766 6789999988877665443
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.61 E-value=0.011 Score=47.60 Aligned_cols=163 Identities=15% Similarity=0.144 Sum_probs=105.0
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecC--CcCCeEEEEEcCCCCEEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYD--HIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~ 195 (344)
....+.++++.++|+++++. .+ .+.++|..++... .+..... ....++++.+.|+|++.+
T Consensus 57 ~~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~~----------------~l~~~~~~~~~~~~nd~~vd~~G~iw~ 118 (295)
T d2ghsa1 57 LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLT----------------LHAELESDLPGNRSNDGRMHPSGALWI 118 (295)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEE----------------EEECSSTTCTTEEEEEEEECTTSCEEE
T ss_pred CCCCcEEEEEecCCCEEEEE-eC-ccEEeecccceee----------------EEeeeecCCCcccceeeEECCCCCEEE
Confidence 34578899999998877754 44 5888998653211 1111111 123578899999999776
Q ss_pred EEeC----CCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEE--------------------
Q psy15157 196 SGSK----DKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLY-------------------- 250 (344)
Q Consensus 196 s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~-------------------- 250 (344)
+... .+.-.+|.+..++..... ........++|+++++.++++. ..+.|..|
T Consensus 119 ~~~~~~~~~~~g~l~~~~~g~~~~~~---~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~ 195 (295)
T d2ghsa1 119 GTMGRKAETGAGSIYHVAKGKVTKLF---ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST 195 (295)
T ss_dssp EEEETTCCTTCEEEEEEETTEEEEEE---EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT
T ss_pred EeccccccccceeEeeecCCcEEEEe---eccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccC
Confidence 6543 234556766666443222 2233457789999998776554 45555544
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc-cCCCEEEEE
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT-RNGKYLLSS 304 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~s~ 304 (344)
+.+|++.++.-..+.|..||. .++.+..+.... ..+++++|- +|.+.|+..
T Consensus 196 ~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~--~~~T~~~FGG~d~~~LyvT 258 (295)
T d2ghsa1 196 GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG--KQTTCPAFIGPDASRLLVT 258 (295)
T ss_dssp TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC--SBEEEEEEESTTSCEEEEE
T ss_pred cccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCC--CceEEEEEeCCCCCEEEEE
Confidence 667888877777888999994 678887776433 358999995 576666543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.35 E-value=0.013 Score=48.77 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=45.0
Q ss_pred eEEEEECCCCCEEEEEeCCC-----------eEEEEEcCCccccccCCCCCCcCCCCCCceEE-EecCCcCCeEEEEEcC
Q psy15157 122 CRAGAFSIDGQLCATGSVDA-----------SIKILDVDRMLAKSSMESSEPQNDQQGHPVIR-TLYDHIEEVTCLEFHP 189 (344)
Q Consensus 122 v~~~~~s~~~~~l~sg~~dg-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~ 189 (344)
+.......+|++++.|+.+. .+.+||..+.. +.... ....|.......++.+
T Consensus 22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~----------------w~~~~~~~~~~~~~~~~~~~~~ 85 (387)
T d1k3ia3 22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI----------------VSDRTVTVTKHDMFCPGISMDG 85 (387)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC----------------BCCCEEEECSCCCSSCEEEECT
T ss_pred cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCc----------------EeecCCCCCCcccceeEEEEec
Confidence 34445566888888888531 36789886421 11111 1122333334567888
Q ss_pred CCCEEEEEeCC-CcEEEEEcCCC
Q psy15157 190 SAPILASGSKD-KTVKMFDYSKS 211 (344)
Q Consensus 190 ~~~~l~s~~~d-g~i~iwd~~~~ 211 (344)
++.+++.|+.+ ..+.+||..+.
T Consensus 86 ~g~i~v~Gg~~~~~~~~yd~~~~ 108 (387)
T d1k3ia3 86 NGQIVVTGGNDAKKTSLYDSSSD 108 (387)
T ss_dssp TSCEEEECSSSTTCEEEEEGGGT
T ss_pred CCcEEEeecCCCcceeEecCccC
Confidence 99988888765 57888886554
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.85 E-value=0.018 Score=45.27 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=70.5
Q ss_pred EEcCC--CCEEEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC
Q psy15157 186 EFHPS--APILASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKD 263 (344)
Q Consensus 186 ~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~d 263 (344)
..+|+ |+.++-.+ +|.|.+.|+.+++... ...+.......+|+|||++|+..... .+.+
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~---Lt~~~~~~~~p~~SPDG~~iaf~~~~---------------~~~~ 65 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRK---IVSNLGVINNARFFPDGRKIAIRVMR---------------GSSL 65 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTCCEEE---EECSSSEEEEEEECTTSSEEEEEEEE---------------STTC
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEE---EecCCCcccCEEECCCCCEEEEEEee---------------CCCC
Confidence 35677 88776554 4678888998876432 23345567888999999988754310 1111
Q ss_pred --CcEEEEeCCCCeEEeeeccc----CCCccEEEEEEccCCCEEEEEeC------CCcEEEEEcCCCee
Q psy15157 264 --GDIKIWDGVSSKCVATFSKA----HDGAEISSLTFTRNGKYLLSSGK------DSLVKLWELSSARC 320 (344)
Q Consensus 264 --g~i~iwd~~~~~~~~~~~~~----~~~~~v~~i~~~~~~~~l~s~~~------dg~i~vwd~~~~~~ 320 (344)
..|.+++..+++........ ..........|+|+|+.|+.... ...+...+...+..
T Consensus 66 ~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (281)
T d1k32a2 66 NTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINF 134 (281)
T ss_dssp CEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEE
T ss_pred CceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCcee
Confidence 24777888877765432211 01123567889999999886532 22355666655544
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.65 E-value=0.1 Score=40.94 Aligned_cols=171 Identities=9% Similarity=-0.041 Sum_probs=98.9
Q ss_pred CCCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEE
Q psy15157 118 HKSPCRAGAFSIDGQ-LCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILAS 196 (344)
Q Consensus 118 h~~~v~~~~~s~~~~-~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 196 (344)
....+..+++...++ +..+-...+.|.+.+++. ......+.........++++|...++.-
T Consensus 75 ~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g------------------~~~~~~~~~~~~~P~~l~vd~~~g~ly~ 136 (266)
T d1ijqa1 75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG------------------VKRKTLFRENGSKPRAIVVDPVHGFMYW 136 (266)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS------------------SSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred CCCCcceEEEeeccceEEEEecCCCEEEeEecCC------------------ceEEEEEcCCCCCcceEEEEcccCeEEE
Confidence 345677888876454 444445667899998853 1222233444566788999986554443
Q ss_pred Ee--CCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q psy15157 197 GS--KDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSS 274 (344)
Q Consensus 197 ~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~ 274 (344)
.. ..+.|.-.++...... .+. ...-.....+++++.++.|+.+ -...+.|...|+...
T Consensus 137 ~~~~~~~~I~r~~~dGs~~~-~l~-~~~~~~p~gl~iD~~~~~lYw~------------------d~~~~~I~~~~~dG~ 196 (266)
T d1ijqa1 137 TDWGTPAKIKKGGLNGVDIY-SLV-TENIQWPNGITLDLLSGRLYWV------------------DSKLHSISSIDVNGG 196 (266)
T ss_dssp EECSSSCEEEEEETTSCCEE-EEE-CSSCSCEEEEEEETTTTEEEEE------------------ETTTTEEEEEETTSC
T ss_pred eccCCCcceeEeccCCCcee-ccc-ccccceeeEEEeeccccEEEEe------------------cCCcCEEEEEECCCC
Confidence 32 3455666666543322 121 1223456788888876666543 344556666666544
Q ss_pred eEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 275 KCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 275 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
................++++. ++...++-..++.|+..+..+|+....+...
T Consensus 197 ~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~g~~~~~~~~~ 248 (266)
T d1ijqa1 197 NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAEN 248 (266)
T ss_dssp SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEECS
T ss_pred CEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEECCCCcceEEEEcC
Confidence 322222222212235677776 3444555557788999998888877766654
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.62 E-value=0.1 Score=40.76 Aligned_cols=189 Identities=6% Similarity=-0.064 Sum_probs=111.7
Q ss_pred EecCCCceEEEEECCCCCEEEEE-eCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCE
Q psy15157 115 VTSHKSPCRAGAFSIDGQLCATG-SVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPI 193 (344)
Q Consensus 115 ~~~h~~~v~~~~~s~~~~~l~sg-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 193 (344)
+..+...+..++|....+.+.-. ..++.|+..+++.. .....+..-...+.++++..-+..
T Consensus 31 ~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~------------------~~~~v~~~~~~~p~~iAvD~~~~~ 92 (263)
T d1npea_ 31 LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG------------------EPTTIIRQDLGSPEGIALDHLGRT 92 (263)
T ss_dssp EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC------------------CCEEEECTTCCCEEEEEEETTTTE
T ss_pred cccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccC------------------CcEEEEEeccccccEEEEeccCCe
Confidence 34455568889998866655554 45677888877531 112223333456789999875554
Q ss_pred -EEEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCC-C--EEEEE-------------------
Q psy15157 194 -LASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDH-F--VLRLY------------------- 250 (344)
Q Consensus 194 -l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~--~i~~~------------------- 250 (344)
.++-...+.|.+.++....... +. ......+..++++|...+++..... + .|...
T Consensus 93 lY~~d~~~~~I~~~~~dg~~~~~-l~-~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~ 170 (263)
T d1npea_ 93 IFWTDSQLDRIEVAKMDGTQRRV-LF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPN 170 (263)
T ss_dssp EEEEETTTTEEEEEETTSCSCEE-EE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEE
T ss_pred EEEeccCCCEEEEEecCCceEEE-Ee-cccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccc
Confidence 4555667899999987654322 21 1223457889999987777654322 1 22211
Q ss_pred ----cCCCCEE-EEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q psy15157 251 ----SSDGRIY-CSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYT 325 (344)
Q Consensus 251 ----~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 325 (344)
++.++.| ++-...+.|...|.........+.... ...+|++. ++...++-...+.|...|..+++.+..+.
T Consensus 171 glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~---~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~~~~~~~ 246 (263)
T d1npea_ 171 GLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ---YPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (263)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC---SEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred eEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCC---CcEEEEEE-CCEEEEEECCCCEEEEEECCCCccceEEC
Confidence 3333333 333445667777765444332332211 24577775 44444555577889999999999887765
Q ss_pred cC
Q psy15157 326 GA 327 (344)
Q Consensus 326 ~~ 327 (344)
.+
T Consensus 247 ~~ 248 (263)
T d1npea_ 247 PH 248 (263)
T ss_dssp CS
T ss_pred CC
Confidence 43
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.10 E-value=0.054 Score=45.19 Aligned_cols=166 Identities=13% Similarity=0.122 Sum_probs=95.9
Q ss_pred EEEECC---CCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCC--CCEEEEE
Q psy15157 124 AGAFSI---DGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPS--APILASG 197 (344)
Q Consensus 124 ~~~~s~---~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~ 197 (344)
.+.+.. ||+|++... .+..|-+-|++++.... +..+ .....+..++..++ -.+++..
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~k----------------Ii~i-Pn~~~~HG~r~~~~p~T~YV~~~ 151 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDA----------------ILEI-PNAKGIHGLRPQKWPRSNYVFCN 151 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEE----------------EEEC-SSCCSEEEEEECCSSBCSEEEEE
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECcceeeeE----------------EEec-CCCCCCceeecccCCCeEEEEcc
Confidence 445543 788877766 57889999997643221 1111 22334455555443 3366655
Q ss_pred eCC------------------CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCE-------------
Q psy15157 198 SKD------------------KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFV------------- 246 (344)
Q Consensus 198 ~~d------------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~------------- 246 (344)
+.+ +.+.++|..+.+........ .....+.++++|+++++.+.+..
T Consensus 152 ~e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~---g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~ 228 (459)
T d1fwxa2 152 GEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEM 228 (459)
T ss_dssp ECSCEESSCSSSSTTCGG-EEEEEEEEETTTTEEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSE
T ss_pred CccccccCCCCccccchhhcceEEEEEecCCceEEEEeeeC---CChhccccCCCCCEEEEEeccccCCcchhhcccccc
Confidence 542 23567888776655444432 23556899999999998764321
Q ss_pred --EEEE--------cCCCCEEEEEeCCCcEEEEeCCCC---eEEeeecccCCCccEEEEEEccCCCEEEEEe-CCCcEEE
Q psy15157 247 --LRLY--------SSDGRIYCSGSKDGDIKIWDGVSS---KCVATFSKAHDGAEISSLTFTRNGKYLLSSG-KDSLVKL 312 (344)
Q Consensus 247 --i~~~--------~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~v 312 (344)
+.++ .++|++--. +.+.+-|.+.. ..+..+.... ....+..+|||+|+++++ .+.++.|
T Consensus 229 D~i~V~n~~rie~av~~Gk~~ei----ngV~VVD~~~~~~~~v~~yIPVpK---sPHGV~vSPDGKyi~VaGKLs~tVSV 301 (459)
T d1fwxa2 229 DHIVVFNIAEIEKAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKHLCVAGKLSPTVTV 301 (459)
T ss_dssp EEEEEEEHHHHHHHHHHTCSEEE----TTEEEEECSGG--CSSEEEEEEES---SCCCEEECTTSSEEEEECTTSSBEEE
T ss_pred eEEEEechHHhHHhhhcCCcEEe----CCceeecccccCCcceeEEEecCC---CCCceEECCCCCEEEEeCCcCCcEEE
Confidence 1111 122322111 33666776542 2222232121 246789999999987765 6889999
Q ss_pred EEcC
Q psy15157 313 WELS 316 (344)
Q Consensus 313 wd~~ 316 (344)
+|++
T Consensus 302 iD~~ 305 (459)
T d1fwxa2 302 LDVT 305 (459)
T ss_dssp EEGG
T ss_pred EEeh
Confidence 9996
|
| >d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain superfamily: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain family: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain domain: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.93 E-value=0.0035 Score=38.25 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=41.7
Q ss_pred HHhHHHHHHHHHHHHhhCCcHHHHHHHHhhcCCCCCCCCchHHHHHHHhhhccC
Q psy15157 14 LRRQEALYRLIISQLYYDGHHPMAITLQSSCNVVEPCPPSDRLSQLVHIGLAHE 67 (344)
Q Consensus 14 ~~~~~~l~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~p~~~l~~l~~~~~~~~ 67 (344)
-+|+.+|+..|+.+|...|+..++.++..++.+..+..+......++.+.|...
T Consensus 4 ~rQ~eeL~kaI~~Yl~~~~~~~~~~~l~~e~~l~~~~~~~~ky~glLEKKWtSV 57 (76)
T d1uuja_ 4 QRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSV 57 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHHHHTTHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHCCCCChhhhhhhcCcchhHHHHH
Confidence 479999999999999999999999999999876544333444556676665443
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=95.90 E-value=0.36 Score=40.14 Aligned_cols=64 Identities=22% Similarity=0.264 Sum_probs=38.8
Q ss_pred cCCCCEEE-EEeCCCcEEEEeCCCCeE------------EeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy15157 251 SSDGRIYC-SGSKDGDIKIWDGVSSKC------------VATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSS 317 (344)
Q Consensus 251 ~~~~~~l~-~~~~dg~i~iwd~~~~~~------------~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~ 317 (344)
+|||++++ ++..+.++.|+|++.-.. +.... -+-.....+|+..|.-..|---|..|.-|++..
T Consensus 283 SPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e---lglgPLht~fd~~g~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 283 APDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE---LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp CTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB---CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecc---cCcCccccccCCCceEEEEeeccceEEEEecch
Confidence 34444433 455678899999863211 11111 112245678998886555556899999999843
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.72 E-value=0.033 Score=49.18 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=80.9
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeecc--------------------------cc-----------ceEEEEEecCC
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQE--------------------------ST-----------FVRCLSFHPCG 235 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------~~-----------~v~~~~~~~~~ 235 (344)
.++.++.+|.+.++|..+++.+........ .. .-...+++|..
T Consensus 318 ~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~ 397 (571)
T d2ad6a1 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred ceeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEeccccccccccceECCCC
Confidence 467788899999999988875422111000 00 00125677877
Q ss_pred CEEEEEeCCCEEEEEcC----------CCCEEEE--------EeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccC
Q psy15157 236 DYMVVGTDHFVLRLYSS----------DGRIYCS--------GSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRN 297 (344)
Q Consensus 236 ~~l~~~~~~~~i~~~~~----------~~~~l~~--------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 297 (344)
..+++...+........ .+..+.. ....|.|.-+|+.+++.+-....... ..+-...-.
T Consensus 398 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~---~~~g~l~Ta 474 (571)
T d2ad6a1 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA---AWGGTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC---CCSBCEEET
T ss_pred ceEEEeccccccccccccccccCCccccccceeeccccCCcccCCcccEEEeccCCCceeeEcCCCCC---CCcceeEec
Confidence 77777666544433210 0011110 11235799999999998876653221 111112234
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeEEEeecC
Q psy15157 298 GKYLLSSGKDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 298 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
+.++++|+.||.++.+|.++|+.+-+++-.
T Consensus 475 gglVf~G~~dg~l~A~Da~tGe~lW~~~l~ 504 (571)
T d2ad6a1 475 GGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEECC
Confidence 678888999999999999999999988754
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.72 E-value=0.1 Score=46.01 Aligned_cols=63 Identities=17% Similarity=0.259 Sum_probs=48.4
Q ss_pred CCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 263 DGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 263 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
.|.|.-+|+.+++.+-...... ++.+-..+..|.++++|+.||.++.+|..+|+.+-+++-..
T Consensus 465 ~G~l~AiD~~TG~i~W~~~~~~---p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~ 527 (582)
T d1flga_ 465 VGSLRAMDPVSGKVVWEHKEHL---PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS---CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCeEEEEcCCCCcEEeecCCCC---CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCC
Confidence 4678899999999887765332 22222234567888899999999999999999999998543
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=95.67 E-value=0.089 Score=46.60 Aligned_cols=62 Identities=13% Similarity=0.185 Sum_probs=46.3
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
|.|.-||..+++.+-...... ++.+-.++..|.+++.|+.||.++.+|.++|+.+-++.-..
T Consensus 453 G~l~A~D~~TG~~~W~~~~~~---~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~ 514 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKMERF---AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS 514 (596)
T ss_dssp EEEEEECTTTCCEEEEEEESS---CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ceEEEEeCCCCceecccCCCC---CCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCC
Confidence 579999999999876654221 12222233467888899999999999999999999997543
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.36 E-value=0.63 Score=38.93 Aligned_cols=107 Identities=17% Similarity=0.196 Sum_probs=62.3
Q ss_pred cCCCceEEEEECCCCCEEEEE-eCC----CeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCC
Q psy15157 117 SHKSPCRAGAFSIDGQLCATG-SVD----ASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSA 191 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l~sg-~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 191 (344)
++.-.+...++||+++++|-+ +.+ ..|+++|+.++... -..+. ......++|.+++
T Consensus 122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~-----------------~~~i~--~~~~~~~~W~~D~ 182 (430)
T d1qfma1 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL-----------------PDVLE--RVKFSCMAWTHDG 182 (430)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE-----------------EEEEE--EECSCCEEECTTS
T ss_pred cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceec-----------------ccccc--cccccceEEcCCC
Confidence 333345566789999987743 333 35999999754211 11111 1112468899999
Q ss_pred CEEEEEeCC----------------CcEEEEEcCCCccccceeeec--cccceEEEEEecCCCEEEEEe
Q psy15157 192 PILASGSKD----------------KTVKMFDYSKSSVRKAHKTIQ--ESTFVRCLSFHPCGDYMVVGT 242 (344)
Q Consensus 192 ~~l~s~~~d----------------g~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~ 242 (344)
..|+-...| ..|..|.+.+........... ....+..+..++++++++...
T Consensus 183 ~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~ 251 (430)
T d1qfma1 183 KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (430)
T ss_dssp SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred CEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEe
Confidence 866543322 257788887764332222222 233466777889999987543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=95.21 E-value=0.19 Score=41.23 Aligned_cols=119 Identities=17% Similarity=0.173 Sum_probs=70.2
Q ss_pred eEEEEEcCCCCEEEEEeCCC-----------cEEEEEcCCCccccceeee-ccccceEEEEEecCCCEEEEEeCCCEEEE
Q psy15157 182 VTCLEFHPSAPILASGSKDK-----------TVKMFDYSKSSVRKAHKTI-QESTFVRCLSFHPCGDYMVVGTDHFVLRL 249 (344)
Q Consensus 182 v~~~~~~~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~i~~ 249 (344)
+.......++++++.|+.+. .+.+||..+++........ .+.......++.++|.+++
T Consensus 22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v---------- 91 (387)
T d1k3ia3 22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVV---------- 91 (387)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEE----------
T ss_pred cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEE----------
Confidence 33444556788888877531 3778999887654322211 1222223345556555544
Q ss_pred EcCCCCEEEEEeCC-CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCC------CcEEEEEcCCCee
Q psy15157 250 YSSDGRIYCSGSKD-GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKD------SLVKLWELSSARC 320 (344)
Q Consensus 250 ~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d------g~i~vwd~~~~~~ 320 (344)
.|+.+ ..+.+||..+......-. ......-.+++..+||++++.|+.+ ..+.+||..+.+-
T Consensus 92 ---------~Gg~~~~~~~~yd~~~~~w~~~~~-~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W 159 (387)
T d1k3ia3 92 ---------TGGNDAKKTSLYDSSSDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 159 (387)
T ss_dssp ---------ECSSSTTCEEEEEGGGTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred ---------eecCCCcceeEecCccCccccccc-ccccccccceeeecCCceeeeccccccccccceeeeecCCCCce
Confidence 44433 578999988776543222 1111223456777899999988753 3589999988754
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=95.12 E-value=0.049 Score=48.13 Aligned_cols=133 Identities=13% Similarity=0.194 Sum_probs=82.0
Q ss_pred EEEEEeCCCcEEEEEcCCCccccceeeecc---------------------------------ccceEEEEEecCCCEEE
Q psy15157 193 ILASGSKDKTVKMFDYSKSSVRKAHKTIQE---------------------------------STFVRCLSFHPCGDYMV 239 (344)
Q Consensus 193 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------------------------------~~~v~~~~~~~~~~~l~ 239 (344)
.++.++.+|.+.++|..+++.......... ...-..++++|+...++
T Consensus 329 ~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~y 408 (573)
T d1kb0a2 329 VILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVY 408 (573)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEE
T ss_pred eeeeccccceeEEeccccccccccccccccccccccccccceeeeeeccccccceEEeecccCCccccccccCCCcceEE
Confidence 567788899999999988875433221100 00011246778777777
Q ss_pred EEeCCCEEEEEcC-------------------CCCEEEEE-----eCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEc
Q psy15157 240 VGTDHFVLRLYSS-------------------DGRIYCSG-----SKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFT 295 (344)
Q Consensus 240 ~~~~~~~i~~~~~-------------------~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~ 295 (344)
+...+....+... ....+..+ ..-|.|.-||..+++.+-....... ..+-..+
T Consensus 409 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p---~~gg~ls 485 (573)
T d1kb0a2 409 LPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP---WNGGTLT 485 (573)
T ss_dssp EEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS---CCCCEEE
T ss_pred eeccccceeeecccccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCCCCceEeeecCCCC---CCCceEE
Confidence 7655544333210 00011110 0115688999999998877653321 1111233
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 296 RNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 296 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
-.|.+|++|+.||.++.+|.++|+.+-+|.-..
T Consensus 486 tagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~ 518 (573)
T d1kb0a2 486 TAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (573)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EcCCEEEEECCCCeEEEEECCCCcEeEEEECCC
Confidence 467889999999999999999999999987543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=94.90 E-value=0.082 Score=46.45 Aligned_cols=62 Identities=13% Similarity=0.268 Sum_probs=46.7
Q ss_pred CcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC
Q psy15157 264 GDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVKLWELSSARCLIAYTGAG 328 (344)
Q Consensus 264 g~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 328 (344)
|.|.-||+.+++.+-.+..... ..+-.+.-.+.++++|+.||.++.+|..+|+.+-+++-..
T Consensus 438 G~l~A~D~~tGk~~W~~~~~~~---~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~ 499 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPYPTH---WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (560)
T ss_dssp EEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEeCCCCeEeeeccCCCC---CCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCC
Confidence 6788899999998877653221 2222233457788899999999999999999999988643
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=94.58 E-value=0.89 Score=36.69 Aligned_cols=32 Identities=13% Similarity=0.246 Sum_probs=25.7
Q ss_pred cEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCe
Q psy15157 288 EISSLTFTRNGKYLLSS-GKDSLVKLWELSSAR 319 (344)
Q Consensus 288 ~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~~~ 319 (344)
..+.|+++||+++|+.+ +..+.|++|++....
T Consensus 207 ~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~ 239 (340)
T d1v04a_ 207 FANGINISPDGKYVYIAELLAHKIHVYEKHANW 239 (340)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred ccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence 47999999999887665 567889999997554
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=93.78 E-value=1.9 Score=37.39 Aligned_cols=50 Identities=16% Similarity=0.361 Sum_probs=34.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEE
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLS 303 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s 303 (344)
.+.++++|+.||.++-+|.++|+.+-++...... .-.-+.+.-+|+ ||++
T Consensus 468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~-~~~P~ty~~dGkqyv~v 518 (560)
T d1kv9a2 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGI-VAAPMTFELAGRQYVAI 518 (560)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-CSCCEEEEETTEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEeEEEECCCCc-cccCEEEEECCEEEEEE
Confidence 5667778999999999999999999887643221 111245556786 4544
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=93.45 E-value=2.2 Score=37.08 Aligned_cols=48 Identities=17% Similarity=0.344 Sum_probs=34.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccC--CCccEEEEEEccCCC-EEEE
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAH--DGAEISSLTFTRNGK-YLLS 303 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~-~l~s 303 (344)
.|.++++|+.||.++.||.++|+.+.++.... ...+ +.|.-+|+ ||+.
T Consensus 487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P---~ty~~~GkQYv~v 537 (573)
T d1kb0a2 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP---STYMVDGRQYVSV 537 (573)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETTEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccC---EEEEECCEEEEEE
Confidence 67788899999999999999999998776332 2222 45555776 4433
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.10 E-value=1.4 Score=33.95 Aligned_cols=168 Identities=11% Similarity=-0.035 Sum_probs=87.7
Q ss_pred CCCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCC-EEE
Q psy15157 118 HKSPCRAGAFSIDGQLCATGS-VDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAP-ILA 195 (344)
Q Consensus 118 h~~~v~~~~~s~~~~~l~sg~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 195 (344)
....+..++|.+..+.+.-.. .++.|.-.+++... ........+......+.++++.+.+. +.+
T Consensus 28 ~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~--------------~~~~~~~~~~~~~~~p~glAvD~~~~~lY~ 93 (266)
T d1ijqa1 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH--------------GVSSYDTVISRDIQAPDGLAVDWIHSNIYW 93 (266)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------CEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCC--------------CCcceEEEEeCCCCCcceEEEeeccceEEE
Confidence 445678899998777665554 45666666654210 00111222233345567888877555 555
Q ss_pred EEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe
Q psy15157 196 SGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSK 275 (344)
Q Consensus 196 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 275 (344)
+-...+.|.+.++........ ..........++++|...+++.... +..+.|.-.++....
T Consensus 94 ~d~~~~~I~v~~~~g~~~~~~--~~~~~~~P~~l~vd~~~g~ly~~~~-----------------~~~~~I~r~~~dGs~ 154 (266)
T d1ijqa1 94 TDSVLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHGFMYWTDW-----------------GTPAKIKKGGLNGVD 154 (266)
T ss_dssp EETTTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETTTTEEEEEEC-----------------SSSCEEEEEETTSCC
T ss_pred EecCCCEEEeEecCCceEEEE--EcCCCCCcceEEEEcccCeEEEecc-----------------CCCcceeEeccCCCc
Confidence 556678899999876543222 2233455788999987666664431 112233333332222
Q ss_pred EEeeecccCCCccEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCee
Q psy15157 276 CVATFSKAHDGAEISSLTFTRNGKYLLSS-GKDSLVKLWELSSARC 320 (344)
Q Consensus 276 ~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~vwd~~~~~~ 320 (344)
...... .. ....+++++++.++.|+-+ ...+.|...++.....
T Consensus 155 ~~~l~~-~~-~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~ 198 (266)
T d1ijqa1 155 IYSLVT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 198 (266)
T ss_dssp EEEEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred eecccc-cc-cceeeEEEeeccccEEEEecCCcCEEEEEECCCCCE
Confidence 211111 11 1235667777655554444 4456666666654433
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=92.66 E-value=2.4 Score=35.49 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=30.9
Q ss_pred cceeEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q psy15157 110 YETAYVTSHKSPCRAGAFSIDGQLCATGSVDASIKILDVDR 150 (344)
Q Consensus 110 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~ 150 (344)
++...+...-...++|+|.|+|++|++--..|.|++++..+
T Consensus 17 f~~~~ia~~L~~P~~la~~pdg~llVter~~G~i~~v~~~~ 57 (450)
T d1crua_ 17 FDKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPES 57 (450)
T ss_dssp SCEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred cEEEEEECCCCCceEEEEeCCCeEEEEEecCCEEEEEECCC
Confidence 34444444456788999999999998875679999998654
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.00 E-value=2.2 Score=33.47 Aligned_cols=163 Identities=11% Similarity=0.124 Sum_probs=94.4
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCCCcE
Q psy15157 124 AGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKDKTV 203 (344)
Q Consensus 124 ~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 203 (344)
+.-.+|..+.+|--+ ..++.|||+++. ..+..+.. ...|.--.|-.+. .|+-.+ +..|
T Consensus 67 sAIMhP~~~IiALra-g~~LQiFnletK------------------~klks~~~-~e~VvfWkWis~~-~L~lVT-~taV 124 (327)
T d1utca2 67 SAIMNPASKVIALKA-GKTLQIFNIEMK------------------SKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAV 124 (327)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTT------------------EEEEEEEC-SSCCCEEEESSSS-EEEEEC-SSEE
T ss_pred hhhcCCCCcEEEEec-CCeEEEEehhHh------------------hhhceEEc-CCCcEEEEecCCC-EEEEEc-CCce
Confidence 344567777777655 568999999752 22333322 3356666776544 343333 4679
Q ss_pred EEEEcCCCccccceeeecc----ccceEEEEEecCCCEEEEEe---C----CCEEEEE----------------------
Q psy15157 204 KMFDYSKSSVRKAHKTIQE----STFVRCLSFHPCGDYMVVGT---D----HFVLRLY---------------------- 250 (344)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~---~----~~~i~~~---------------------- 250 (344)
+-|+++.... ...-+..+ ...|-....++++++++..+ . .|.+.+|
T Consensus 125 YHW~~~g~s~-P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGhaa~F~~~~~ 203 (327)
T d1utca2 125 YHWSMEGESQ-PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKM 203 (327)
T ss_dssp EEEESSSSCC-CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECC
T ss_pred EEEcccCCCC-chhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccccceeeeeEEEEc
Confidence 9999854321 11111222 34466667778888876542 2 2444555
Q ss_pred ------------------------------------------------------------cCCCCEEEEEeCCCcEEEEe
Q psy15157 251 ------------------------------------------------------------SSDGRIYCSGSKDGDIKIWD 270 (344)
Q Consensus 251 ------------------------------------------------------------~~~~~~l~~~~~dg~i~iwd 270 (344)
+..-..+..-+.-|.|++||
T Consensus 204 ~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyD 283 (327)
T d1utca2 204 EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYD 283 (327)
T ss_dssp TTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred CCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEE
Confidence 33445666778889999999
Q ss_pred CCCCeEEeeecccCCCccEEEEEEccCCCEEEEEeCCCcEE
Q psy15157 271 GVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSGKDSLVK 311 (344)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~ 311 (344)
+.++.++..-+-.. ..|-..+-+.+..-+++-..+|.|.
T Consensus 284 leTgt~i~~nRIs~--~~iF~~a~~~~~~Gi~~VNr~GqVl 322 (327)
T d1utca2 284 LETGTCIYMNRISG--ETIFVTAPHEATAGIIGVNRKGQVL 322 (327)
T ss_dssp TTTCCEEEEEECCS--SCEEEEEEETTTTEEEEEETTSEEE
T ss_pred cccccEEEEeecCC--CceEEeccCCCCceEEEECCCCeEE
Confidence 99998887654322 2354444444444455555666554
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=91.67 E-value=3 Score=34.92 Aligned_cols=63 Identities=14% Similarity=0.270 Sum_probs=42.7
Q ss_pred CcCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCccccceee------eccccceEEEEEecC---CCEEEE
Q psy15157 178 HIEEVTCLEFHPSAPILASGSKDKTVKMFDYSKSSVRKAHKT------IQESTFVRCLSFHPC---GDYMVV 240 (344)
Q Consensus 178 h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~v~~~~~~~~---~~~l~~ 240 (344)
.-..-++|+|.|++++|++--..|.|++++..++........ .........++++|+ ..++++
T Consensus 25 ~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYv 96 (450)
T d1crua_ 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (450)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred CCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEE
Confidence 345678999999999888765679999998777654322211 112346788999985 444443
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.93 E-value=1.1 Score=37.33 Aligned_cols=76 Identities=21% Similarity=0.270 Sum_probs=49.0
Q ss_pred eEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCCEEEEEe
Q psy15157 226 VRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGKYLLSSG 305 (344)
Q Consensus 226 v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~ 305 (344)
+..++++|++++++.+-+. .|+....|+++|+.+++.+....... ....++|.+|++.|+-..
T Consensus 127 ~~~~~~Spd~~~la~s~d~--------------~G~e~~~l~v~Dl~tg~~~~~~i~~~---~~~~~~W~~D~~~~~Y~~ 189 (430)
T d1qfma1 127 LRGYAFSEDGEYFAYGLSA--------------SGSDWVTIKFMKVDGAKELPDVLERV---KFSCMAWTHDGKGMFYNA 189 (430)
T ss_dssp EEEEEECTTSSEEEEEEEE--------------TTCSCEEEEEEETTTTEEEEEEEEEE---CSCCEEECTTSSEEEEEE
T ss_pred ecceEecCCCCEEEEEecc--------------ccCchheeEEeccCcceecccccccc---cccceEEcCCCCEEEEEE
Confidence 4446788999888865432 13444579999999998764322111 124688999999876543
Q ss_pred CC----------------CcEEEEEcCCC
Q psy15157 306 KD----------------SLVKLWELSSA 318 (344)
Q Consensus 306 ~d----------------g~i~vwd~~~~ 318 (344)
.+ ..|..|.+.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~v~~h~lgt~ 218 (430)
T d1qfma1 190 YPQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (430)
T ss_dssp CCCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred eccccCcccccccccCCcceEEEEECCCC
Confidence 22 25777877665
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=90.51 E-value=3.4 Score=33.01 Aligned_cols=62 Identities=10% Similarity=0.179 Sum_probs=38.7
Q ss_pred cCCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEE
Q psy15157 179 IEEVTCLEFHPSAPIL-ASGSKDKTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVV 240 (344)
Q Consensus 179 ~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 240 (344)
-...+.|+++|+++.| ++-+..+.|++|++.............-....-.+.+.+.+..+.+
T Consensus 205 l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwv 267 (340)
T d1v04a_ 205 FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWV 267 (340)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred CCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEE
Confidence 4567899999999855 5556788999999876543322222223344566777764333333
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.27 E-value=1.7 Score=37.82 Aligned_cols=50 Identities=26% Similarity=0.422 Sum_probs=35.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEeeecccCCCccEEEEEEccCCC-EEEE
Q psy15157 253 DGRIYCSGSKDGDIKIWDGVSSKCVATFSKAHDGAEISSLTFTRNGK-YLLS 303 (344)
Q Consensus 253 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s 303 (344)
.|.++++|+.||.++-+|.++|+.+.++...... .-.-+.|..+|+ |++.
T Consensus 496 agglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~-~~~P~ty~~~G~qYv~i 546 (582)
T d1flga_ 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGI-VSPPITWEQDGEQYLGV 546 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-CSCCEEEEETTEEEEEE
T ss_pred cCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCc-cccCEEEEECCEEEEEE
Confidence 5667778999999999999999999887643221 112256667885 4443
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=88.48 E-value=5.1 Score=32.15 Aligned_cols=176 Identities=14% Similarity=0.195 Sum_probs=95.6
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEc------CCCCEEEEEe-CC-
Q psy15157 129 IDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFH------PSAPILASGS-KD- 200 (344)
Q Consensus 129 ~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~------~~~~~l~s~~-~d- 200 (344)
|+..+++.....+-|.+||++ ++.+..+. .+.++-+..- ....-++.++ .+
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~-------------------G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~ 96 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLE-------------------GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSE 96 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETT-------------------CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCT
T ss_pred cCccEEEEEcCcCCEEEEcCC-------------------CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcC
Confidence 455677777777779999985 23333332 2445554433 1222344444 22
Q ss_pred --CcEEEEEcCCCcc-ccceee-----eccccceEEEEE--ecC-CC-EEEEEeCCCEEEEE------------------
Q psy15157 201 --KTVKMFDYSKSSV-RKAHKT-----IQESTFVRCLSF--HPC-GD-YMVVGTDHFVLRLY------------------ 250 (344)
Q Consensus 201 --g~i~iwd~~~~~~-~~~~~~-----~~~~~~v~~~~~--~~~-~~-~l~~~~~~~~i~~~------------------ 250 (344)
.+|.+|.+..... ...+.. ......+..+|+ ++. |. ++++...++.+..|
T Consensus 97 ~~~~l~~~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f 176 (353)
T d1h6la_ 97 GKNTIEIYAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAF 176 (353)
T ss_dssp TTCEEEEEEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEE
T ss_pred cceeEEEEEecCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeecc
Confidence 3577888753221 111110 011122444555 664 44 56667778888776
Q ss_pred -----------cCCCCEEEEEeCCCcEEEEeCCC-----CeEEeeecccCCCccEEEEEEcc--CCC-EE-EEEeCCCcE
Q psy15157 251 -----------SSDGRIYCSGSKDGDIKIWDGVS-----SKCVATFSKAHDGAEISSLTFTR--NGK-YL-LSSGKDSLV 310 (344)
Q Consensus 251 -----------~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~v~~i~~~~--~~~-~l-~s~~~dg~i 310 (344)
+.....|+.+-.+.-|..++... +..+......+-.+.+-.|+.-. ++. || +|.-.+++.
T Consensus 177 ~~~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f 256 (353)
T d1h6la_ 177 KMNSQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSY 256 (353)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred CCCCccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeE
Confidence 45556777777777666666542 23332222222234566666432 322 44 445567889
Q ss_pred EEEEcCCC-eeEEEee
Q psy15157 311 KLWELSSA-RCLIAYT 325 (344)
Q Consensus 311 ~vwd~~~~-~~~~~~~ 325 (344)
.+||..+. +.+.+|.
T Consensus 257 ~vydr~~~~~~~g~F~ 272 (353)
T d1h6la_ 257 AIYERQGQNKYVADFQ 272 (353)
T ss_dssp EEEESSTTCCEEEEEE
T ss_pred EEEecCCCccccceEE
Confidence 99999874 6777776
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.31 E-value=4.2 Score=31.02 Aligned_cols=117 Identities=9% Similarity=-0.020 Sum_probs=66.5
Q ss_pred cCCCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEE
Q psy15157 117 SHKSPCRAGAFSIDGQLC-ATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILA 195 (344)
Q Consensus 117 ~h~~~v~~~~~s~~~~~l-~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 195 (344)
.-...+.++++..-++.| .+-...+.|.+.+++.. .....+.........++++|...+++
T Consensus 76 ~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~------------------~~~~l~~~~l~~p~~l~vdp~~g~ly 137 (263)
T d1npea_ 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT------------------QRRVLFDTGLVNPRGIVTDPVRGNLY 137 (263)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC------------------SCEEEECSSCSSEEEEEEETTTTEEE
T ss_pred eccccccEEEEeccCCeEEEeccCCCEEEEEecCCc------------------eEEEEecccccCCcEEEEecccCcEE
Confidence 334578899998655544 45556778999988531 11112223345678999999776555
Q ss_pred EEe-CCCcEEEE--EcCCCccccceeeeccccceEEEEEecCCCEEEEEe-CCCEEEEEcCC
Q psy15157 196 SGS-KDKTVKMF--DYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGT-DHFVLRLYSSD 253 (344)
Q Consensus 196 s~~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~i~~~~~~ 253 (344)
-.. ..+..+|| ++..... ..+. ...-.....+++++.++.|+.+. ..+.|...+.+
T Consensus 138 ~t~~~~~~~~I~r~~~dG~~~-~~i~-~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~ 197 (263)
T d1npea_ 138 WTDWNRDNPKIETSHMDGTNR-RILA-QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (263)
T ss_dssp EEECCSSSCEEEEEETTSCCC-EEEE-CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeecCCCCcEEEEecCCCCCc-eeee-eecccccceEEEeecCcEEEEEeCCCCEEEEEECC
Confidence 333 22333444 4543322 2221 12334567899998888776664 45566665433
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=88.04 E-value=0.52 Score=41.19 Aligned_cols=72 Identities=11% Similarity=0.149 Sum_probs=44.2
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEeeeccc--CCCccEEEEEEccCCCEEEEEe-----CCCcEEEEEcCCCeeEEEeecC
Q psy15157 256 IYCSGSKDGDIKIWDGVSSKCVATFSKA--HDGAEISSLTFTRNGKYLLSSG-----KDSLVKLWELSSARCLIAYTGA 327 (344)
Q Consensus 256 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~-----~dg~i~vwd~~~~~~~~~~~~~ 327 (344)
.++.++.|+.+.-.|.++|+.+...... +.+..+++--.-.++..++.++ .+|.|+-+|+++|+.+-++...
T Consensus 117 ~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~ 195 (571)
T d2ad6a1 117 QIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFAT 195 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred eEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEecc
Confidence 4446778888888899999877554321 1111122111122344433332 3788999999999999887644
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=86.27 E-value=0.74 Score=40.42 Aligned_cols=71 Identities=6% Similarity=0.135 Sum_probs=46.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEeeeccc--CCCccEEEE-EEccCCCEEEEEeC------CCcEEEEEcCCCeeEEEe
Q psy15157 254 GRIYCSGSKDGDIKIWDGVSSKCVATFSKA--HDGAEISSL-TFTRNGKYLLSSGK------DSLVKLWELSSARCLIAY 324 (344)
Q Consensus 254 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~i-~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~ 324 (344)
+..++.++.|+.|.-.|.++|+.+..+... +....+++- .+. ++ .++.+.. .|.|+-+|+++|+.+-+|
T Consensus 121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~-~~-~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~ 198 (596)
T d1w6sa_ 121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (596)
T ss_dssp CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred ceEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEE-CC-eEEEeeccccccccCceEEEECCCCcEEEEe
Confidence 445667888999999999999988776422 111112111 111 33 4555532 489999999999999887
Q ss_pred ec
Q psy15157 325 TG 326 (344)
Q Consensus 325 ~~ 326 (344)
..
T Consensus 199 ~t 200 (596)
T d1w6sa_ 199 YA 200 (596)
T ss_dssp ES
T ss_pred ec
Confidence 53
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.03 E-value=10 Score=30.63 Aligned_cols=141 Identities=12% Similarity=0.062 Sum_probs=75.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCccccccCCCCCCcCCCCCCceEEEecCCcCCeEEEEEcCCCCEEEEEeCC
Q psy15157 121 PCRAGAFSIDGQLCATGSVDASIKILDVDRMLAKSSMESSEPQNDQQGHPVIRTLYDHIEEVTCLEFHPSAPILASGSKD 200 (344)
Q Consensus 121 ~v~~~~~s~~~~~l~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 200 (344)
.|..++|+.+ .++.. .++.+..+++.... .......-...+..+.++|. .++....+
T Consensus 88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~------------------~~~~~~~~~~~~~~~~~~p~--~~~l~~~~ 144 (381)
T d1xipa_ 88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELS------------------EFRTVTSFEKPVFQLKNVNN--TLVILNSV 144 (381)
T ss_dssp TEEEEEEETT--EEEEE-ESSEEEEEESSSTT------------------CEEEEEECSSCEEEEEECSS--EEEEEETT
T ss_pred CeEEEEeeCC--EEEEE-eCCCEEEEEeeccc------------------cccccccccccccceecCCc--eeEEEecC
Confidence 6888999744 45554 45678888875321 11111222345778888775 46667778
Q ss_pred CcEEEEEcCCCccccceeeeccccceEEEEEecCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCcEEEE-eCCCCeEEee
Q psy15157 201 KTVKMFDYSKSSVRKAHKTIQESTFVRCLSFHPCGDYMVVGTDHFVLRLYSSDGRIYCSGSKDGDIKIW-DGVSSKCVAT 279 (344)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~dg~i~iw-d~~~~~~~~~ 279 (344)
|.+.++++..+..... ...+.+++|+ ++..++ .|++.|..++++..++ ..+- ++.... .
T Consensus 145 ~~~~~~~l~~~~~~~~------~~~v~~~~~~--~~~~~v--------~ws~kgkq~v~~~g~~-~q~k~~i~~~~---~ 204 (381)
T d1xipa_ 145 NDLSALDLRTKSTKQL------AQNVTSFDVT--NSQLAV--------LLKDRSFQSFAWRNGE-MEKQFEFSLPS---E 204 (381)
T ss_dssp SEEEEEETTTCCEEEE------EESEEEEEEC--SSEEEE--------EETTSCEEEEEEETTE-EEEEEEECCCH---H
T ss_pred CCEEEEEeccCccccc------cCCcceEEec--CCceEE--------EEeCCcEEEEEeCCCc-eeeccCCCCcc---c
Confidence 9999999988643211 1234555554 222222 2445555565653322 1111 111111 1
Q ss_pred ecc-cCCCccEEEEEEccCCCEEEEE
Q psy15157 280 FSK-AHDGAEISSLTFTRNGKYLLSS 304 (344)
Q Consensus 280 ~~~-~~~~~~v~~i~~~~~~~~l~s~ 304 (344)
+.. ......|.+|.|..+..++++-
T Consensus 205 ~~~p~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 205 LEELPVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp HHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCCcCCCcceeEEEEecCceEEEEE
Confidence 111 1112368899998777666654
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.88 E-value=9.5 Score=28.76 Aligned_cols=23 Identities=17% Similarity=0.381 Sum_probs=17.1
Q ss_pred CCCEEEEEeCCCc-----EEEEEcCCCe
Q psy15157 297 NGKYLLSSGKDSL-----VKLWELSSAR 319 (344)
Q Consensus 297 ~~~~l~s~~~dg~-----i~vwd~~~~~ 319 (344)
++++++.|+.++. |.+||+.+.+
T Consensus 242 ~~~l~v~GG~~~~~~~~~v~~yd~~~~~ 269 (288)
T d1zgka1 242 QGRIYVLGGYDGHTFLDSVECYDPDTDT 269 (288)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEecCCCCeecceEEEEECCCCE
Confidence 6778888775543 7899998865
|