Psyllid ID: psy1519

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Protein Sequence
MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIESFFGTPLSPELYEIKPEVAEYFKQKKPY
Secondary Structure (PSIPRED)
ccEEEEccccccccccHHHHHHccccccccEEEEEccccccccccEEEEEEEEEccccccccccccccccEEEEEEEEEEEEccccEEEEccccccccEEEEcccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccccEEEEEcccccccHHHHcccccccEEEcccccccccHHHHcccHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccccccHHHHHHccccccccEEEEEccccccccccEEEEEEEEccccHHHccccccccccEEEEEEEEEccccccccEEEEEccccccEEEccccHHHHHHHccccccccccEccccccccHHHHHHHHHHHHccccccccccccEEEEEcccccccEEEEccccccEEEEEEcccccccccHHccccHHHHHHHccccc
Coil and Loop (DISEMBL)
mpikyigrttDFAGKTLWEILGNLKGYGVGRLLYRQRfqrypepcyfkilkvqpvqhdgnlenphenYRKVMVYVASVFRGVLEPEVQEIFAtsykpdyrlipkhEEQEWLRrtgkgekkiqyidpwvdmpplLKKVVARDLelenktpepnsfrMKVSFLETCNNLkreadenhpadikiesffgtplspelyeIKPEVAEYFKQKKPY
Flexible Loop (DISEMBL)
mpikyigrttdfagKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFatsykpdyrlipKHEEqewlrrtgkgekkiqyidpwvdmppLLKKVVARDLELenktpepnsfrmkVSFLETCNNLKREadenhpadiKIESFFGTPLSPELYEIKPEvaeyfkqkkpy
Low Complexity Region (SEG)
MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIESFFGTPLSPELYEIKPEVAEYFKQKKPY
Disordered region (IsUnstruct)
***KYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARDL***************VSFLETCN*************IKIESFFGTPLSPELYEIK*************
Disordered Region (DISOPRED)
*PIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEW********KKIQYIDPWVDMPPLLKKVV******************KVSFLE**********************FGTPLSPELYEIKPEVAEYFK*****
Disordered Region (DISEMBL)
MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIESFFGTPLSPELYEIKPEVAEYFKQKKPY
Disordered Region (DISPRO)
MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIESFFGTPLSPELYEIKPEVAEYFKQKK**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIESFFGTPLSPELYEIKPEVAEYFKQKKPY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	210	2.2.26 [Sep-21-2011]
Q9JIK9	218	28S ribosomal protein S34	yes	N/A	0.476	0.458	0.309	1e-06
P82929	218	28S ribosomal protein S34	yes	N/A	0.523	0.504	0.308	1e-06
P82930	218	28S ribosomal protein S34	yes	N/A	0.476	0.458	0.309	3e-06

>sp|Q9JIK9|RT34_MOUSE 28S ribosomal protein S34, mitochondrial OS=Mus musculus GN=Mrps34 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 13/113 (11%)

Query: 27  YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
           +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL++          +    F+G  E 
Sbjct: 74  FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGR-------AWGILTFKGKSED 126

Query: 86  EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
             +EI    Y  D+RL+PKHEE+ +   T K E ++      V  PPLL+ ++
Sbjct: 127 TAREIEQVMYH-DWRLVPKHEEEAFTAFTAKPEDRLNS----VPYPPLLRAMI 174

Mus musculus (taxid: 10090)

>sp|P82929|RT34_BOVIN 28S ribosomal protein S34, mitochondrial OS=Bos taurus GN=MRPS34 PE=1 SV=2

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 13/123 (10%)

Query: 17  LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
           L ++LG L  +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL++          + 
Sbjct: 64  LLQLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWG 116

Query: 76  ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
              F+G  E E +EI    +  D+RL+PKHEE  +   T   E+  +     V  PPLL+
Sbjct: 117 ILTFKGKTESEAREIEQVMHH-DWRLVPKHEEAAFTSFTPAPEETPRP----VPYPPLLR 171

Query: 136 KVV 138
            ++
Sbjct: 172 AMI 174

Bos taurus (taxid: 9913)

>sp|P82930|RT34_HUMAN 28S ribosomal protein S34, mitochondrial OS=Homo sapiens GN=MRPS34 PE=1 SV=2

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 13/113 (11%)

Query: 27  YGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEP 85
           +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL++          +    F+G  E 
Sbjct: 74  FGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGK-------AWGILTFKGKTES 126

Query: 86  EVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLKKVV 138
           E +EI    Y  D+RL+PKHEE+ +   T   E  +      V  PPLL+ ++
Sbjct: 127 EAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLAS----VPYPPLLRAMI 174

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
383854502	194	PREDICTED: uncharacterized protein LOC10	0.857	0.927	0.432	3e-33
157125424	182	mitochondrial ribosomal protein, S34, pu	0.828	0.956	0.453	4e-33
125977062	188	GA11991 [Drosophila pseudoobscura pseudo	0.838	0.936	0.441	6e-33
307191187	196	28S ribosomal protein S34, mitochondrial	0.833	0.892	0.450	9e-33
157125420	182	mitochondrial ribosomal protein, S34, pu	0.828	0.956	0.447	2e-32
195328099	188	GM25627 [Drosophila sechellia] gi|194119	0.847	0.946	0.441	3e-32
357626909	193	ribosomal protein S34 [Danaus plexippus]	0.885	0.963	0.413	3e-32
170047951	182	mitochondrial ribosomal protein S34 [Cul	0.828	0.956	0.437	3e-32
194748741	188	GF10114 [Drosophila ananassae] gi|190624	0.847	0.946	0.446	4e-32
156553673	194	PREDICTED: 28S ribosomal protein S34, mi	0.885	0.958	0.426	5e-32

>gi|383854502|ref|XP_003702760.1| PREDICTED: uncharacterized protein LOC100877992 [Megachile rotundata]

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 19/199 (9%)

Query: 1   MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
           MPIKYIGRTT   GK LWEIL NLK +GVGR++ R  FQRYPEPCY +ILKV  +     
Sbjct: 1   MPIKYIGRTTTLKGKPLWEILANLKNHGVGRMVIRYTFQRYPEPCYMRILKVAALPDTS- 59

Query: 61  LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
            ++PH+  RKV V V S FRG  +P  ++I + SYKPDY LIPK EE  +L      +  
Sbjct: 60  -KHPHDP-RKVRVLVESTFRGKTQPTPRQIDSVSYKPDYMLIPKDEEHRYLNHI---QPP 114

Query: 121 IQYIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLK-----READENH 175
           ++ +   V+ PPLLK+++ R+ + +N TP        V  +    NLK     + A+E  
Sbjct: 115 VKILPRTVEFPPLLKEMLIREAKKKNTTP--------VLHMPAIYNLKGIKNYKVAEEGE 166

Query: 176 PADIKIESFFGTPLSPELY 194
             ++ +    GTP +P LY
Sbjct: 167 TPNVDVVMSLGTPATPHLY 185

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157125424|ref|XP_001654334.1| mitochondrial ribosomal protein, S34, putative [Aedes aegypti] gi|108882698|gb|EAT46923.1| AAEL001926-PA [Aedes aegypti]

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/192 (45%), Positives = 111/192 (57%), Gaps = 18/192 (9%)

Query: 3   IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
           IKYIGRTTDF GKTLWEI+GNLK +GVGR++ R  F+RYPEP Y KI+KV+ +       
Sbjct: 4   IKYIGRTTDFKGKTLWEIVGNLKNFGVGRVVVRSMFERYPEPSYMKIVKVETL------- 56

Query: 63  NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
            P+E  RKV V V   FRG   P++ EI + SYK DYRL+ KHEE+ + +     EK   
Sbjct: 57  -PNEATRKVKVTVEKTFRGRTYPKLVEINSVSYKADYRLLHKHEEESYCQAVQPTEK--- 112

Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
            I   +D+PPLLK+ V R    E    +P   +M +      NN+ R A E     I + 
Sbjct: 113 IIPREIDLPPLLKEFVQR----ETGKSDP---KMAIKLKPGHNNVYRLAKEGEKPTIDVS 165

Query: 183 SFFGTPLSPELY 194
              G P SP LY
Sbjct: 166 MGLGKPASPRLY 177

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125977062|ref|XP_001352564.1| GA11991 [Drosophila pseudoobscura pseudoobscura] gi|195168205|ref|XP_002024922.1| GL17855 [Drosophila persimilis] gi|54641311|gb|EAL30061.1| GA11991 [Drosophila pseudoobscura pseudoobscura] gi|194108352|gb|EDW30395.1| GL17855 [Drosophila persimilis]

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/197 (44%), Positives = 117/197 (59%), Gaps = 21/197 (10%)

Query: 3   IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
           IKYIGRTTDF G TLWE++ NL  +GVGR++ R  FQRYPEPCY +ILKVQ V       
Sbjct: 6   IKYIGRTTDFKGNTLWELVSNLPNWGVGRMVIRNMFQRYPEPCYMRILKVQAVDEQ---- 61

Query: 63  NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
              +  RKV V V   +RGV +P+  EI++TSYK DY L+P+ EE ++L      +KK+ 
Sbjct: 62  --TDQIRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQAEEAKFL----SNQKKVA 115

Query: 123 --YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIK 180
              +   +D+PPLL++ V  +      T E N F MKV F +T N L R A+      +K
Sbjct: 116 PVVLPTKIDLPPLLREYVKEE------TGEANPF-MKVHFKKTPNKLARMAEAGEEPTLK 168

Query: 181 IESFFGTP--LSPELYE 195
           +    G P  +S +LYE
Sbjct: 169 VSMDLGQPKSVSSKLYE 185

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191187|gb|EFN74884.1| 28S ribosomal protein S34, mitochondrial [Camponotus floridanus]

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 7/182 (3%)

Query: 1   MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
           MPIK+IGRTTDF GK LWEILGNLK +GVGRL+ R RFQRYPEPCY KILKV  +     
Sbjct: 1   MPIKFIGRTTDFKGKPLWEILGNLKDFGVGRLVIRNRFQRYPEPCYMKILKVAAMPPP-- 58

Query: 61  LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
            + PH + RKV+V V  VFRG+  P+  ++ + +YK DY L+PK +E  +L      E+K
Sbjct: 59  -DKPHTD-RKVIVLVERVFRGLKSPKPVQMDSATYKADYMLVPKDQEHLYLENNKSPEEK 116

Query: 121 IQYIDPWVDMPPLLKKVVARDLELE-NKTPEPNSFRMKVSFLETCNNLKREADENHPADI 179
           I  +    D+PPLL +++AR ++   +K  E     +K +F        R A+E     +
Sbjct: 117 I--LPRTTDLPPLLSQIIARQMKARGDKVSEEPKLTLKYNFEGASIKSYRLAEEGESPTV 174

Query: 180 KI 181
           K+
Sbjct: 175 KL 176

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157125420|ref|XP_001654332.1| mitochondrial ribosomal protein, S34, putative [Aedes aegypti] gi|108882696|gb|EAT46921.1| AAEL001943-PA [Aedes aegypti]

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/192 (44%), Positives = 111/192 (57%), Gaps = 18/192 (9%)

Query: 3   IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
           IKYIGRTTDF GKTLWEI+GNLK +GVGR++ R  F+RYPEP Y KI+KV+ +       
Sbjct: 4   IKYIGRTTDFKGKTLWEIVGNLKNFGVGRVVVRSMFERYPEPSYMKIVKVETL------- 56

Query: 63  NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
            P+E  RKV V V   FRG   P++ EI + SYK DYRL+ KHEE+ + +     EK   
Sbjct: 57  -PNEATRKVKVTVEKTFRGRTYPKLVEINSVSYKADYRLLHKHEEEPYCKAVQPTEK--- 112

Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
            I   +D+PPLLK+ V R    E    +P   ++ +      NN+ R A E     I + 
Sbjct: 113 IIPREIDLPPLLKEFVQR----ETGKSDP---KIAIKLKPGHNNVYRLAKEGEKPTIDVS 165

Query: 183 SFFGTPLSPELY 194
              G P SP LY
Sbjct: 166 MGLGKPASPRLY 177

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195328099|ref|XP_002030754.1| GM25627 [Drosophila sechellia] gi|194119697|gb|EDW41740.1| GM25627 [Drosophila sechellia]

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 118/195 (60%), Gaps = 17/195 (8%)

Query: 3   IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
           IKYIGRTTDF G TLWE++ +L  +GVGRLL R  FQRYPEPCY +ILKVQ V      E
Sbjct: 6   IKYIGRTTDFRGNTLWELVSDLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60

Query: 63  NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
            P E  RKV V V   +RGV +P+  EI++TSYK DY L+P+ +E ++L    K E  + 
Sbjct: 61  QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDQETKYLNNKKKVEPVV- 118

Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
            +   +D+PPLL+++V+     E   P P   +MKV +  T N + R A +   + + + 
Sbjct: 119 -LPTKIDLPPLLRELVSE----ETGNPNP---QMKVHYKLTDNKMARLAKDGEKSTVSLA 170

Query: 183 SFFGT--PLSPELYE 195
              G   P+S +LYE
Sbjct: 171 LGVGQPKPVSAKLYE 185

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357626909|gb|EHJ76808.1| ribosomal protein S34 [Danaus plexippus]

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 10/196 (5%)

Query: 3   IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
           IKY+GR+T+F GKTLWEI+G+LK YGVGR++ R  F RYPEP + KI+KV+         
Sbjct: 6   IKYVGRSTNFKGKTLWEIVGSLKNYGVGRIIVRSVFNRYPEPSFMKIVKVETC------- 58

Query: 63  NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
            P E  R+V V+V   FRG   P++ EI+ TSYKPDY LIPK EE + L      E ++ 
Sbjct: 59  -PDEERRRVRVWVEKTFRGRKLPQLTEIYRTSYKPDYNLIPKDEEYKLLEAVKNSESEV- 116

Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
            +   ++MPPL+K+ + +D E +        + + +S+  + N + R A  +    IK  
Sbjct: 117 ILPNTIEMPPLMKRFIVKDHE-KKGLETIKEYVLPLSYNHSPNRVARIAQGDEKPTIKFT 175

Query: 183 SFFGTPLSPELYEIKP 198
              G P SP LYE  P
Sbjct: 176 MGLGKPASPSLYEGIP 191

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170047951|ref|XP_001851466.1| mitochondrial ribosomal protein S34 [Culex quinquefasciatus] gi|167870209|gb|EDS33592.1| mitochondrial ribosomal protein S34 [Culex quinquefasciatus]

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/192 (43%), Positives = 112/192 (58%), Gaps = 18/192 (9%)

Query: 3   IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
           IKYIGRTTDF GKTLWEI+GNLK +GVGR++ R  F+RYPEP + +I+KV  +       
Sbjct: 4   IKYIGRTTDFKGKTLWEIVGNLKNFGVGRVVVRSMFERYPEPSFMRIVKVDAL------- 56

Query: 63  NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
            P+E  RKV V V   FRG   P++ EI + SYK DYRL+ KHEE+ + R   + EK   
Sbjct: 57  -PNEETRKVKVTVEKTFRGRKYPKLVEIDSVSYKADYRLLHKHEEEAYCRGQARAEK--- 112

Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
            I   +D+PPLL++ V R    E    +P   ++ V      N++ R A E    ++ I 
Sbjct: 113 IIPSEIDLPPLLREFVQR----ETGKVDP---KIVVKMKPGHNSIYRLAREGEKPNVDIS 165

Query: 183 SFFGTPLSPELY 194
              G P SP LY
Sbjct: 166 MGLGKPASPSLY 177

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194748741|ref|XP_001956803.1| GF10114 [Drosophila ananassae] gi|190624085|gb|EDV39609.1| GF10114 [Drosophila ananassae]

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 113/195 (57%), Gaps = 17/195 (8%)

Query: 3   IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
           IKY GRTTDF G TLWE++  L  +GVGR+L R  FQRYPEPCY +ILKVQ V      E
Sbjct: 6   IKYFGRTTDFRGNTLWELVSELPNWGVGRMLIRNMFQRYPEPCYMRILKVQAVD-----E 60

Query: 63  NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
            P E  RKV V V   +RGV +P+  EI++TSYK DY L+P+ EE ++L    K E+ + 
Sbjct: 61  QPGEE-RKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDEEAKYLNNNKKVEEVV- 118

Query: 123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
            +   +D+PPLL++ V    E  N  P+     MKV F  T N L R A +     +   
Sbjct: 119 -LPTLIDLPPLLREFVTE--ETGNSNPQ-----MKVHFKRTHNKLARLAKDGEKPSVSFG 170

Query: 183 SFFGT--PLSPELYE 195
              G   P+S +LYE
Sbjct: 171 VGLGQPKPVSAKLYE 185

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156553673|ref|XP_001603882.1| PREDICTED: 28S ribosomal protein S34, mitochondrial-like [Nasonia vitripennis]

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 11/197 (5%)

Query: 1   MPIKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGN 60
           MP KYIG+T DF GKTLWEILGNLK +GVGR++ R RFQRY EPCY+KI+KV+ + +  N
Sbjct: 1   MPYKYIGKTVDFKGKTLWEILGNLKNFGVGRMIARNRFQRYDEPCYYKIMKVEALPNPDN 60

Query: 61  LENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKK 120
           +   H   RKV+  V   FRG+ + ++ ++ + +YK DY L+PKH+E E+       E+ 
Sbjct: 61  VTY-HGQQRKVIALVEKTFRGIKQEKLVQMESATYKADYFLVPKHKEAEFSNTVTVKER- 118

Query: 121 IQYIDPW-VDMPPLLKKVVARDLELEN-KTPEPNSFRMKVSFLETCNNLKREADENH-PA 177
              I P  ++ PPL+K+ V R ++LE  K  EP   +M + + ++     R A E   P 
Sbjct: 119 ---IFPREMEFPPLMKEFVIRQMKLEGIKNKEP---KMPIKYNDSGLKTYRVAKEGETPT 172

Query: 178 DIKIESFFGTPLSPELY 194
           + +     GTP SP LY
Sbjct: 173 EPEPSIGLGTPASPSLY 189

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
FB|FBgn0260460	188	mRpS34 "mitochondrial ribosoma	0.847	0.946	0.446	1.3e-34
RGD|1305623	218	Mrps34 "mitochondrial ribosoma	0.571	0.550	0.308	1.3e-11
UNIPROTKB|C9JJ19	225	MRPS34 "28S ribosomal protein	0.609	0.568	0.307	3.5e-11
UNIPROTKB|P82930	218	MRPS34 "28S ribosomal protein	0.585	0.564	0.311	4.5e-11
ZFIN|ZDB-GENE-041114-71	220	mrps34 "mitochondrial ribosoma	0.585	0.559	0.340	4.5e-11
UNIPROTKB|F1MKN3	218	MRPS34 "28S ribosomal protein	0.704	0.678	0.296	4.6e-10
MGI|MGI:1930188	218	Mrps34 "mitochondrial ribosoma	0.571	0.550	0.300	4.6e-10
UNIPROTKB|P82929	218	MRPS34 "28S ribosomal protein	0.704	0.678	0.290	6e-09
UNIPROTKB|F1RG19	218	MRPS34 "Uncharacterized protei	0.585	0.564	0.304	7.1e-08
WB|WBGene00010905	228	mrps-34 [Caenorhabditis elegan	0.638	0.587	0.313	6.2e-07

FB|FBgn0260460 mRpS34 "mitochondrial ribosomal protein S34" [Drosophila melanogaster (taxid:7227)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 87/195 (44%), Positives = 117/195 (60%)

Query:     3 IKYIGRTTDFAGKTLWEILGNLKGYGVGRLLYRQRFQRYPEPCYFKILKVQPVQHDGNLE 62
             IKYIGRTTDF G TLWE++ NL  +GVGRLL R  FQRYPEPCY +ILKVQ V      E
Sbjct:     6 IKYIGRTTDFRGNTLWELVSNLPNWGVGRLLIRNMFQRYPEPCYMRILKVQSVD-----E 60

Query:    63 NPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQ 122
              P E  RKV V V   +RGV +P+  EI++TSYK DY L+P+ +E ++L    K E  I 
Sbjct:    61 QPGE-IRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVPQDQEAKYLNNKKKVEPVI- 118

Query:   123 YIDPWVDMPPLLKKVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIKIE 182
              +   +++PPLL+++V+ +      T  PN  +MKV +  T N + R A +     +   
Sbjct:   119 -LPTKIELPPLLRELVSEE------TGNPNP-QMKVHYKLTDNKMARLAKDGEKPTVNFA 170

Query:   183 SFFGTP--LSPELYE 195
                G P  +S +LYE
Sbjct:   171 LGVGQPKPVSAKLYE 185

GO:0006412 "translation" evidence=ISS

GO:0003735 "structural constituent of ribosome" evidence=ISS

GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS

RGD|1305623 Mrps34 "mitochondrial ribosomal protein S34" [Rattus norvegicus (taxid:10116)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 41/133 (30%), Positives = 73/133 (54%)

Query:    17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
             L ++L  L  +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL+  H     ++   
Sbjct:    64 LLQLLARLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGRAWGILT-- 119

Query:    76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
                F+G  E   +EI    Y  D+RL+PKHEE+ +   TGK E ++  + P+   PPLL+
Sbjct:   120 ---FKGKSEETAREIEQVMYH-DWRLVPKHEEEAFTAFTGKAEDRLNLV-PY---PPLLR 171

Query:   136 KVVARDLELENKT 148
              ++  + +    T
Sbjct:   172 AMILAERQKNGDT 184

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005840 "ribosome" evidence=IEA

UNIPROTKB|C9JJ19 MRPS34 "28S ribosomal protein S34, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 43/140 (30%), Positives = 76/140 (54%)

Query:    17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
             L ++LG L  +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL+  H     ++ + 
Sbjct:    64 LLQLLGRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILTFK 121

Query:    76 ASVFR--GVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPL 133
              + F   G  E E +EI    Y  D+RL+PKHEE+ +   T   E  +  + P+   PPL
Sbjct:   122 DASFSSSGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLASV-PY---PPL 176

Query:   134 LKKVVARDLEL--ENKTPEP 151
             L+ ++  + +   +  T EP
Sbjct:   177 LRAMIIAERQKNGDTSTEEP 196

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|P82930 MRPS34 "28S ribosomal protein S34, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 43/138 (31%), Positives = 75/138 (54%)

Query:    17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
             L ++LG L  +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL+  H     ++   
Sbjct:    64 LLQLLGRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILT-- 119

Query:    76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
                F+G  E E +EI    Y  D+RL+PKHEE+ +   T   E  +  + P+   PPLL+
Sbjct:   120 ---FKGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSLASV-PY---PPLLR 171

Query:   136 KVVARDLEL--ENKTPEP 151
              ++  + +   +  T EP
Sbjct:   172 AMIIAERQKNGDTSTEEP 189

GO:0005840 "ribosome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

ZFIN|ZDB-GENE-041114-71 mrps34 "mitochondrial ribosomal protein S34" [Danio rerio (taxid:7955)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 48/141 (34%), Positives = 76/141 (53%)

Query:    17 LWEILGNLKGYGVGRLLYRQRF-QRYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
             L+ +L  ++ +G+GRL  R+ +   + EPCY+KI KV+    D   EN   ++ K   + 
Sbjct:    63 LFSLLSGMRMFGLGRLFTRKSWLDEHTEPCYWKITKVKV---DYTAENM--DHGKA--WG 115

Query:    76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
                FRG  EP+ +E+    Y  D+RL+PKHEE+E+ R     E   +     V  PPLL+
Sbjct:   116 VLTFRGKEEPKEREVDKVMYH-DWRLVPKHEEEEFRRCEPVPEPAARS----VRYPPLLR 170

Query:   136 KVV----ARDLELENKT-PEP 151
              ++    A++  +E  T PEP
Sbjct:   171 AMILAQQAKEQGVEVSTLPEP 191

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005840 "ribosome" evidence=IEA

UNIPROTKB|F1MKN3 MRPS34 "28S ribosomal protein S34, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 149 (57.5 bits), Expect = 4.6e-10, P = 4.6e-10
 Identities = 49/165 (29%), Positives = 86/165 (52%)

Query:    17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
             L ++LG L  +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL+  H     ++   
Sbjct:    64 LLQLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILT-- 119

Query:    76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
                F+G  E E +EI    +  D+RL+PKHEE  +   T   E+K + + P+   PPLL+
Sbjct:   120 ---FKGKTESEAREIEQVMHH-DWRLVPKHEEAAFTSFTPAPEEKPRPV-PY---PPLLR 171

Query:   136 KVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIK 180
              ++  + +   K  +P++    +S LE       +  EN  A  K
Sbjct:   172 AMILAERQ---KNGDPSTEEPMLS-LERIRTDPWDYPENQEAKKK 212

GO:0005739 "mitochondrion" evidence=IEA

MGI|MGI:1930188 Mrps34 "mitochondrial ribosomal protein S34" [Mus musculus (taxid:10090)]

 Score = 149 (57.5 bits), Expect = 4.6e-10, P = 4.6e-10
 Identities = 40/133 (30%), Positives = 72/133 (54%)

Query:    17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
             L ++L  L  +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL+  H     ++   
Sbjct:    64 LLQLLARLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGRAWGILT-- 119

Query:    76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
                F+G  E   +EI    Y  D+RL+PKHEE+ +   T K E ++  + P+   PPLL+
Sbjct:   120 ---FKGKSEDTAREIEQVMYH-DWRLVPKHEEEAFTAFTAKPEDRLNSV-PY---PPLLR 171

Query:   136 KVVARDLELENKT 148
              ++  + +    T
Sbjct:   172 AMILAERQKNGDT 184

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0005840 "ribosome" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0030529 "ribonucleoprotein complex" evidence=IEA

UNIPROTKB|P82929 MRPS34 "28S ribosomal protein S34, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 143 (55.4 bits), Expect = 6.0e-09, P = 6.0e-09
 Identities = 48/165 (29%), Positives = 85/165 (51%)

Query:    17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
             L ++LG L  +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL+  H     ++   
Sbjct:    64 LLQLLGRLPFFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLD--HGKAWGILT-- 119

Query:    76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
                F+G  E E +EI    +  D+RL+PKHEE  +   T   E+  + + P+   PPLL+
Sbjct:   120 ---FKGKTESEAREIEQVMHH-DWRLVPKHEEAAFTSFTPAPEETPRPV-PY---PPLLR 171

Query:   136 KVVARDLELENKTPEPNSFRMKVSFLETCNNLKREADENHPADIK 180
              ++  + +   K  +P++    +S LE       +  EN  A  K
Sbjct:   172 AMILAERQ---KNGDPSTEEPMLS-LERIRTDPWDYPENQEAKKK 212

GO:0005739 "mitochondrion" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

UNIPROTKB|F1RG19 MRPS34 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 136 (52.9 bits), Expect = 7.1e-08, P = 7.1e-08
 Identities = 42/138 (30%), Positives = 72/138 (52%)

Query:    17 LWEILGNLKGYGVGRLLYRQRFQ-RYPEPCYFKILKVQPVQHDGNLENPHENYRKVMVYV 75
             L ++L  L  +G+GRL+ R+ +  ++ EPCY+++ +V+P     NL+  H     ++   
Sbjct:    64 LLQLLNRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYAAENLD--HGKAWGILT-- 119

Query:    76 ASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGEKKIQYIDPWVDMPPLLK 135
                F+G  E E +EI    Y  D+RL+PKHEE+ +   T   E     + P+   PPLL+
Sbjct:   120 ---FKGKTESEAREIEQVMYH-DWRLVPKHEEEAFTAFTLVPEDTPLSV-PY---PPLLR 171

Query:   136 KVVARDLEL--ENKTPEP 151
              ++    +   +  T EP
Sbjct:   172 AMILAQRQKYGDTSTEEP 189

GO:0005739 "mitochondrion" evidence=IEA

WB|WBGene00010905 mrps-34 [Caenorhabditis elegans (taxid:6239)]

 Score = 130 (50.8 bits), Expect = 6.2e-07, P = 6.2e-07
 Identities = 48/153 (31%), Positives = 73/153 (47%)

Query:     3 IKYIGRTTDFA--GKTLWEILGNLKGYGVGRLLYRQRFQR-YPE-PCYFKILKVQPVQHD 58
             I+++G   D A  GK L+EIL  L+ +GVGRL+ +  + R +P  P Y KIL+ +P    
Sbjct:     6 IRFVGNH-DIASEGKFLFEILSQLRNFGVGRLVTKNEWTRKWPNNPSYMKILRAEPGMDR 64

Query:    59 GNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQEWLRRTGKGE 118
                E          VY   VFRG     V E      + D++L+ KH+E+ +   T   +
Sbjct:    65 WLFEGK--------VYAEWVFRGK-NLGVYEFSKDLNRSDWQLVHKHQEKSYTSSTTPMQ 115

Query:   119 KKIQYIDPWVDMPPL---LKKVVARDLELENKT 148
               +  +     +PPL   L +  AR   L+ KT
Sbjct:   116 DLV--LPDSFPLPPLQVHLSQKSARKNGLDEKT 146


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.139   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      210       210   0.00080  112 3  11 22  0.39    33
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  192 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:07
  No. of threads or processors used:  24
  Search cpu time:  20.35u 0.09s 20.44t   Elapsed:  00:00:20
  Total cpu time:  20.35u 0.09s 20.44t   Elapsed:  00:00:27
  Start:  Thu Aug 15 14:31:40 2013   End:  Thu Aug 15 14:32:07 2013

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	210
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 5e-04
 Identities = 31/208 (14%), Positives = 59/208 (28%), Gaps = 55/208 (26%)

Query: 49  ILKVQPVQHDGNLENPHENYRKVMVYVASVFRGVLEPEVQEIFATSYKPDYRLIPKHEEQ 108
           IL  + + H    ++      ++            E  VQ+      + +Y+ +    + 
Sbjct: 45  ILSKEEIDHIIMSKDAVSGTLRLF----WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100

Query: 109 EWLRRTGKGEKKIQYIDP-WVDMPPLLKKVVARD---LELENK----TPEPN-------- 152
           E  + +      I+  D  + D     K  V+R    L+L        P  N        
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 153 ------------SFRMKVSF------------------LETCNNLKREADENHPADIKIE 182
                       S++++                     LE    L  + D N  +  + +
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS--RSD 218

Query: 183 SFFGTPLSPELYEIKPEVAEYFKQKKPY 210
                 L      I+ E+    K  KPY
Sbjct: 219 HSSNIKLRIH--SIQAELRRLLKS-KPY 243

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00