Psyllid ID: psy1529


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCSTKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYGV
ccHHHHHHHHHHccccccccccEEEEEcccccccHHHHHHHHcccccEEEEEEcccccEEEEEEccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEccccccccccccccEEEEEccccccccccccccccccccccccEEEEEEEEEEc
ccHHHHHHHHHHccccccccccEEEEEcccccccHHHHHHHHcccccEEEEEEcccccEEEEEEccccEEccccccccccccccccccEEEEEEccccEEEEEcccccccccccccEEEEEcccccEEEccccccEEEEEccccccccccccccccccccccccEEEEEEEEEEc
MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVeqheptllmikttnnevfGAYCstkwgernqkdergnrtayfgtgetflfslyperakypwvgveqETQVSHANELFMAADQKMITIgggegqaiwmdenirygktdkcstfnnpplcvggdfeirVLEVYGV
MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCStkwgernqkdergnrTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEGQAIWMDENIRYGKTDKCSTFnnpplcvggdfeIRVLEVYGV
MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCSTKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYGV
*****LFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCSTKWGER******GNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVY**
MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCSTKWGERNQ****GNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYGV
MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCSTKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYGV
MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCSTKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYGV
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCSTKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYGV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query175 2.2.26 [Sep-21-2011]
Q08CX5562 TBC1 domain family member yes N/A 0.954 0.297 0.414 5e-42
A1A5K6562 TBC1 domain family member N/A N/A 0.954 0.297 0.409 3e-40
Q9ULP9559 TBC1 domain family member yes N/A 0.954 0.298 0.373 6e-37
Q3UUG6561 TBC1 domain family member yes N/A 0.954 0.297 0.364 5e-34
Q29RJ2516 TBC1 domain family member yes N/A 0.582 0.197 0.485 2e-24
A2ACG1198 Uncharacterized protein C no N/A 0.817 0.722 0.325 6e-17
Q0IID2217 Uncharacterized protein C no N/A 0.817 0.658 0.325 1e-16
A0PJX2215 Uncharacterized protein C no N/A 0.817 0.665 0.312 1e-15
Q6DFV7943 Nuclear receptor coactiva no N/A 0.817 0.151 0.343 6e-15
Q4KMM3866 Oxidation resistance prot no N/A 0.88 0.177 0.316 7e-15
>sp|Q08CX5|TBC24_XENTR TBC1 domain family member 24 OS=Xenopus tropicalis GN=tbc1d24 PE=2 SV=1 Back     alignment and function desciption
 Score =  170 bits (430), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 87/210 (41%), Positives = 118/210 (56%), Gaps = 43/210 (20%)

Query: 4   KKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAY 63
           K++  +WSW+P R  + QP+LLYT  EHG SL+ FY   E HEPTLL+IKTTN EV GA+
Sbjct: 342 KEMRDIWSWIPERFALSQPLLLYTNREHGNSLSRFYLHCEGHEPTLLLIKTTNQEVCGAF 401

Query: 64  CSTKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWV------------------- 104
            ST W ER +    GN+ ++FGTGE F+F L PE  +Y WV                   
Sbjct: 402 LSTDWSERRRS---GNKLSFFGTGECFVFRLQPEVERYEWVVIKHPELGKVNASSGDNDA 458

Query: 105 --------GVEQETQVS------HAN------ELFMAADQKMITIGGGEGQAIWMDENIR 144
                   G++   ++S      H N       +FMA     I IGGG+GQA++ D ++ 
Sbjct: 459 NSSQSAKDGIDPSDRLSPFLATRHFNLPSKSASMFMAGSTDCIIIGGGDGQALYFDSDLN 518

Query: 145 YGKTDKCSTFNNPPLCVGGDFEIRVLEVYG 174
           YG+T  C+TFNN PLC    F+I ++EV+G
Sbjct: 519 YGRTSHCNTFNNQPLC-SETFQISIIEVWG 547




May act as a GTPase-activating protein for Rab family protein(s).
Xenopus tropicalis (taxid: 8364)
>sp|A1A5K6|TBC24_XENLA TBC1 domain family member 24 OS=Xenopus laevis GN=tbc1d24 PE=2 SV=1 Back     alignment and function description
>sp|Q9ULP9|TBC24_HUMAN TBC1 domain family member 24 OS=Homo sapiens GN=TBC1D24 PE=1 SV=2 Back     alignment and function description
>sp|Q3UUG6|TBC24_MOUSE TBC1 domain family member 24 OS=Mus musculus GN=Tbc1d24 PE=2 SV=2 Back     alignment and function description
>sp|Q29RJ2|TBC24_BOVIN TBC1 domain family member 24 OS=Bos taurus GN=TBC1D24 PE=2 SV=1 Back     alignment and function description
>sp|A2ACG1|CT118_MOUSE Uncharacterized protein C20orf118 homolog OS=Mus musculus GN=Gm1332 PE=3 SV=1 Back     alignment and function description
>sp|Q0IID2|CT118_BOVIN Uncharacterized protein C20orf118 homolog OS=Bos taurus PE=2 SV=1 Back     alignment and function description
>sp|A0PJX2|CT118_HUMAN Uncharacterized protein C20orf118 OS=Homo sapiens GN=C20orf118 PE=2 SV=1 Back     alignment and function description
>sp|Q6DFV7|NCOA7_MOUSE Nuclear receptor coactivator 7 OS=Mus musculus GN=Ncoa7 PE=2 SV=2 Back     alignment and function description
>sp|Q4KMM3|OXR1_MOUSE Oxidation resistance protein 1 OS=Mus musculus GN=Oxr1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query175
119114673 589 AGAP010235-PA [Anopheles gambiae str. PE 0.977 0.290 0.859 2e-86
157125664 381 hypothetical protein AaeL_AAEL010292 [Ae 0.977 0.448 0.853 7e-86
45551011 573 skywalker, isoform F [Drosophila melanog 0.977 0.298 0.842 9e-85
307172335 577 TBC1 domain family member 24 [Camponotus 0.977 0.296 0.821 1e-84
45551006 568 skywalker, isoform E [Drosophila melanog 0.977 0.301 0.842 1e-84
21428398218 LD04137p [Drosophila melanogaster] 0.977 0.784 0.842 2e-84
91082207 552 PREDICTED: similar to AGAP010235-PA [Tri 0.971 0.307 0.847 2e-84
442628679 607 skywalker, isoform J [Drosophila melanog 0.965 0.278 0.852 2e-84
442628683 606 skywalker, isoform L [Drosophila melanog 0.965 0.278 0.852 2e-84
383864508 577 PREDICTED: TBC1 domain family member 24- 0.977 0.296 0.821 2e-84
>gi|119114673|ref|XP_319423.3| AGAP010235-PA [Anopheles gambiae str. PEST] gi|116118529|gb|EAA13953.3| AGAP010235-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  323 bits (827), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 147/171 (85%), Positives = 157/171 (91%)

Query: 4   KKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAY 63
           K LFTLWSWLPVRITMYQP+LLYTTEEHGCSLTTFY RVEQHEPTLLMIKT NNEVFGAY
Sbjct: 415 KCLFTLWSWLPVRITMYQPILLYTTEEHGCSLTTFYVRVEQHEPTLLMIKTCNNEVFGAY 474

Query: 64  CSTKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAAD 123
           CS++W ERN KD+RG R AYFGTGETFLFSLYPERAKYPWVG+E +T + HA+ELFMAAD
Sbjct: 475 CSSRWFERNLKDDRGQRQAYFGTGETFLFSLYPERAKYPWVGIEGDTGLGHASELFMAAD 534

Query: 124 QKMITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYG 174
            KMITIGGGEGQAIWMDENIR+GKTD+C TFNNPPLC  GDFEIRVLEVYG
Sbjct: 535 SKMITIGGGEGQAIWMDENIRFGKTDRCQTFNNPPLCASGDFEIRVLEVYG 585




Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157125664|ref|XP_001654417.1| hypothetical protein AaeL_AAEL010292 [Aedes aegypti] gi|108873533|gb|EAT37758.1| AAEL010292-PA, partial [Aedes aegypti] Back     alignment and taxonomy information
>gi|45551011|ref|NP_724303.2| skywalker, isoform F [Drosophila melanogaster] gi|281365294|ref|NP_001163026.1| skywalker, isoform I [Drosophila melanogaster] gi|21392108|gb|AAM48408.1| RE26091p [Drosophila melanogaster] gi|45445191|gb|AAN11097.2| skywalker, isoform F [Drosophila melanogaster] gi|272407119|gb|ACZ94312.1| skywalker, isoform I [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|307172335|gb|EFN63823.1| TBC1 domain family member 24 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|45551006|ref|NP_724300.2| skywalker, isoform E [Drosophila melanogaster] gi|45551008|ref|NP_724301.2| skywalker, isoform G [Drosophila melanogaster] gi|45552433|ref|NP_995739.1| skywalker, isoform D [Drosophila melanogaster] gi|45445187|gb|AAS64730.1| skywalker, isoform D [Drosophila melanogaster] gi|45445188|gb|AAN11095.2| skywalker, isoform E [Drosophila melanogaster] gi|45445189|gb|AAN11096.2| skywalker, isoform G [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|21428398|gb|AAM49859.1| LD04137p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|91082207|ref|XP_972217.1| PREDICTED: similar to AGAP010235-PA [Tribolium castaneum] gi|270007449|gb|EFA03897.1| hypothetical protein TcasGA2_TC014024 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|442628679|ref|NP_001260649.1| skywalker, isoform J [Drosophila melanogaster] gi|284515848|gb|ADB91431.1| MIP14691p [Drosophila melanogaster] gi|440214015|gb|AGB93184.1| skywalker, isoform J [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442628683|ref|NP_001260651.1| skywalker, isoform L [Drosophila melanogaster] gi|440214017|gb|AGB93186.1| skywalker, isoform L [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|383864508|ref|XP_003707720.1| PREDICTED: TBC1 domain family member 24-like isoform 3 [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query175
FB|FBgn0032901592 sky "skywalker" [Drosophila me 0.965 0.285 0.852 2.9e-80
UNIPROTKB|F1NEU9564 TBC1D24 "Uncharacterized prote 0.634 0.196 0.5 1e-41
UNIPROTKB|F1Q1S8542 TBC1D24 "Uncharacterized prote 0.577 0.186 0.509 1.9e-37
UNIPROTKB|F1Q1S9559 TBC1D24 "Uncharacterized prote 0.577 0.180 0.509 2.4e-37
UNIPROTKB|D4A3Z3556 Tbc1d24 "Similar to CG9339-PA 0.577 0.181 0.5 6.4e-37
RGD|1306143562 Tbc1d24 "TBC1 domain family, m 0.577 0.179 0.5 6.8e-37
UNIPROTKB|F1P0C6522 LOC769242 "Uncharacterized pro 0.6 0.201 0.416 1.8e-36
MGI|MGI:2443456561 Tbc1d24 "TBC1 domain family, m 0.634 0.197 0.469 1.9e-36
UNIPROTKB|Q9ULP9559 TBC1D24 "TBC1 domain family me 0.577 0.180 0.490 2.5e-36
UNIPROTKB|F1NUF4569 LOC769242 "Uncharacterized pro 0.6 0.184 0.416 2.9e-36
FB|FBgn0032901 sky "skywalker" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
 Identities = 144/169 (85%), Positives = 154/169 (91%)

Query:     6 LFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNEVFGAYCS 65
             LFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFY RVEQHEPTLLMIKT NNEVFGAYCS
Sbjct:   420 LFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYVRVEQHEPTLLMIKTCNNEVFGAYCS 479

Query:    66 TKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQK 125
             ++W ERN KD++G R AYFGTGETFLFSLYPERAKYPWVG+E +  + H++ELFMAAD K
Sbjct:   480 SRWFERNVKDDKGQRQAYFGTGETFLFSLYPERAKYPWVGIEGDKDLGHSSELFMAADSK 539

Query:   126 MITIGGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYG 174
             MITIGGGEGQAIWMDENIR+GKTD C TFNNPPLC  GDFEIRVLEVYG
Sbjct:   540 MITIGGGEGQAIWMDENIRFGKTDSCKTFNNPPLCPSGDFEIRVLEVYG 588




GO:0005097 "Rab GTPase activator activity" evidence=IEA
GO:0005622 "intracellular" evidence=IEA
GO:0032313 "regulation of Rab GTPase activity" evidence=IEA
GO:0031594 "neuromuscular junction" evidence=IDA
GO:0043195 "terminal bouton" evidence=IDA
UNIPROTKB|F1NEU9 TBC1D24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q1S8 TBC1D24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q1S9 TBC1D24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|D4A3Z3 Tbc1d24 "Similar to CG9339-PA (Predicted)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1306143 Tbc1d24 "TBC1 domain family, member 24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0C6 LOC769242 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:2443456 Tbc1d24 "TBC1 domain family, member 24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9ULP9 TBC1D24 "TBC1 domain family member 24" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NUF4 LOC769242 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q755A3OXR1_ASHGONo assigned EC number0.31810.840.6202yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query175
smart00584165 smart00584, TLDc, domain in TBC and LysM domain co 2e-59
pfam07534136 pfam07534, TLD, TLD 3e-38
COG5142212 COG5142, OXR1, Oxidation resistance protein [DNA r 3e-14
>gnl|CDD|214733 smart00584, TLDc, domain in TBC and LysM domain containing proteins Back     alignment and domain information
 Score =  182 bits (463), Expect = 2e-59
 Identities = 66/173 (38%), Positives = 90/173 (52%), Gaps = 20/173 (11%)

Query: 6   LFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQ-HEPTLLMIKTTNNEVFGAYC 64
           L  + S LP R   Y   LLY++ +HG SL T Y +VE    PTLL+IK T+ EVFGAY 
Sbjct: 9   LALINSHLPTRAEGYPWTLLYSSSQHGYSLNTLYRKVEGYRPPTLLIIKDTDGEVFGAYA 68

Query: 65  STKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQ 124
           S  W   +          ++GTGE+FLF L P+   Y W G  +          ++    
Sbjct: 69  SQAWRVSDH---------FYGTGESFLFQLNPKFVVYDWTGKNKYY--------YINGTP 111

Query: 125 KMITIGGGEGQ-AIWMDENIRYGKTDKCSTFNNPPLCV-GGDFEIRVLEVYGV 175
             + IGGG G   +W+DE++ +G +  C TF NPPL     DF I  +EV+G 
Sbjct: 112 DSLPIGGGGGGFGLWIDEDLNHGSSSHCKTFGNPPLSTKQEDFLILDIEVWGF 164


Length = 165

>gnl|CDD|219457 pfam07534, TLD, TLD Back     alignment and domain information
>gnl|CDD|227471 COG5142, OXR1, Oxidation resistance protein [DNA replication, recombination, and repair] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 175
KOG2372|consensus241 100.0
smart00584165 TLDc domain in TBC and LysM domain containing prot 100.0
PF07534139 TLD: TLD; InterPro: IPR006571 TLDc is a domain of 100.0
COG5142212 OXR1 Oxidation resistance protein [DNA replication 100.0
KOG2557|consensus427 100.0
KOG2801|consensus559 99.94
KOG4636|consensus483 99.7
>KOG2372|consensus Back     alignment and domain information
Probab=100.00  E-value=1.3e-47  Score=300.62  Aligned_cols=157  Identities=40%  Similarity=0.801  Sum_probs=149.2

Q ss_pred             CCHHHHHHHHHcCCccccCC-CceEEEecccccccHHHHHHhhcC-CCCEEEEEEcCCCcEEEeeccCCcccCCccccCC
Q psy1529           1 MNPKKLFTLWSWLPVRITMY-QPVLLYTTEEHGCSLTTFYYRVEQ-HEPTLLMIKTTNNEVFGAYCSTKWGERNQKDERG   78 (175)
Q Consensus         1 ~~~~~~~~L~~~lP~~~~~~-~~~llyss~~hG~S~~~f~~~~~~-~gptllvik~~~g~vfGay~~~~w~~~~~~~~~~   78 (175)
                      |.|+++.+|+..||+|++.. .|+|+||+.+||+|+++||+++.. ..|.|||||+++|+|||||.+++.+.        
T Consensus        79 l~~~~~~~l~e~lp~R~q~~~pW~liyst~~hG~Sl~TlY~~~~~~~~p~lLvird~dg~vFGa~~~~~i~p--------  150 (241)
T KOG2372|consen   79 LTPEMIRQLREHLPPRVQGYTPWRLIYSTEKHGFSLRTLYRSMAELDEPVLLVIRDTDGDVFGAFVSDAIRP--------  150 (241)
T ss_pred             CCHHHHHHHHhhCCcceeeecchhhhcccccccccHHHHHHhhhcccCcEEEEEEcCCCCEeeEeeccceec--------
Confidence            67999999999999999998 899999999999999999999997 77999999999999999999999865        


Q ss_pred             CCCceecCCCeeEEEEcC--CCCcCCCcccccccccccccceeEeeCCCeeeeecCCC-ceeEEeCccCCccccCCCCCC
Q psy1529          79 NRTAYFGTGETFLFSLYP--ERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEG-QAIWMDENIRYGKTDKCSTFN  155 (175)
Q Consensus        79 ~~~~~~G~~~~FLF~l~p--~~~~y~~~~~~~~~~~~~~n~~~~~~~~~~i~~Ggg~~-~~l~id~~l~~g~s~~~~Tf~  155 (175)
                       .++|||+++||||++.|  ++++|+|+|.         |++|++|+.+.|+||||.| ++||||.+|.+|.|++|+||+
T Consensus       151 -~dhyyGtgetFLft~~~~~e~~vy~~TG~---------n~f~i~c~~dfLa~G~GgGRfgLwLD~dL~~G~S~~ceTFg  220 (241)
T KOG2372|consen  151 -NDHYYGTGETFLFTFFPGREFKVYRWTGD---------NSFFIYCDKDFLAFGGGGGRFGLWLDGDLLHGSSHPCETFG  220 (241)
T ss_pred             -cCCcCCCCCeEEEEecCCCceeEeeecCC---------cceEEEechhHhhhcCCCCceEEEecccccccccCCCcccC
Confidence             47899999999999999  8999999984         6899999999999998766 999999999999999999999


Q ss_pred             CCCCCCCCceEEeEEEEEeC
Q psy1529         156 NPPLCVGGDFEIRVLEVYGV  175 (175)
Q Consensus       156 n~~L~~~~~F~i~~iEVw~~  175 (175)
                      |.+|+..++|.|.+||+|+|
T Consensus       221 N~~Ls~~qdF~Iq~lElW~f  240 (241)
T KOG2372|consen  221 NEPLSDKQDFIIQDLELWGF  240 (241)
T ss_pred             CcccCCcCceEEEEEEEEee
Confidence            99999999999999999986



>smart00584 TLDc domain in TBC and LysM domain containing proteins Back     alignment and domain information
>PF07534 TLD: TLD; InterPro: IPR006571 TLDc is a domain of unknown function, restricted to eukaryotes, and commonly found in TBC (IPR000195 from INTERPRO) and LysM (IPR002482 from INTERPRO) domain containing proteins [] Back     alignment and domain information
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG2557|consensus Back     alignment and domain information
>KOG2801|consensus Back     alignment and domain information
>KOG4636|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query175
4acj_A167 Crystal Structure Of The Tldc Domain Of Oxidation R 1e-21
>pdb|4ACJ|A Chain A, Crystal Structure Of The Tldc Domain Of Oxidation Resistance Protein 2 From Zebrafish Length = 167 Back     alignment and structure

Iteration: 1

Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 20/163 (12%) Query: 13 LPVRITMYQPVLLYTTEEHGCSLTTFYYRV-EQHEPTLLMIKTTNNEVFGAYCSTKWGER 71 LP R Y L ++T +HG S+ T Y + +Q P LL+IK ++ ++FGA S + Sbjct: 20 LPPRTIGYPWNLAFSTSKHGMSIKTLYRAMQDQDSPMLLVIKDSDGQIFGALASEPF--- 76 Query: 72 NQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGG 131 K G ++GTGETFLF+ YPE Y W G N F+ D + GG Sbjct: 77 --KVSEG----FYGTGETFLFTFYPEFEAYKWTG---------DNLFFIKGDMDSLAFGG 121 Query: 132 GEGQ-AIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVY 173 G G+ +W+D ++ +G+ C TF NP L + DF ++ +E++ Sbjct: 122 GSGEFGLWLDGDLYHGRNHSCKTFGNPMLSMKEDFFVQDIEIW 164

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query175
4acj_A167 WU\:FB25H12 protein,; immune system; 0.97A {Danio 2e-38
>4acj_A WU\:FB25H12 protein,; immune system; 0.97A {Danio rerio} Length = 167 Back     alignment and structure
 Score =  128 bits (322), Expect = 2e-38
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 20/177 (11%)

Query: 1   MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHE-PTLLMIKTTNNEV 59
           +  +++  L   LP R   Y   L ++T +HG S+ T Y  ++  + P LL+IK ++ ++
Sbjct: 8   LEAEQIEKLAKHLPPRTIGYPWNLAFSTSKHGMSIKTLYRAMQDQDSPMLLVIKDSDGQI 67

Query: 60  FGAYCSTKWGERNQKDERGNRTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELF 119
           FGA  S  +              ++GTGETFLF+ YPE   Y W G          N  F
Sbjct: 68  FGALASEPFKVSEG---------FYGTGETFLFTFYPEFEAYKWTG---------DNLFF 109

Query: 120 MAADQKMITI-GGGEGQAIWMDENIRYGKTDKCSTFNNPPLCVGGDFEIRVLEVYGV 175
           +  D   +   GG     +W+D ++ +G+   C TF NP L +  DF ++ +E++  
Sbjct: 110 IKGDMDSLAFGGGSGEFGLWLDGDLYHGRNHSCKTFGNPMLSMKEDFFVQDIEIWSF 166


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query175
4acj_A167 WU\:FB25H12 protein,; immune system; 0.97A {Danio 100.0
>4acj_A WU\:FB25H12 protein,; immune system; 0.97A {Danio rerio} Back     alignment and structure
Probab=100.00  E-value=2.1e-52  Score=320.38  Aligned_cols=157  Identities=34%  Similarity=0.728  Sum_probs=149.8

Q ss_pred             CCHHHHHHHHHcCCccccCCCceEEEecccccccHHHHHHhhcC-CCCEEEEEEcCCCcEEEeeccCCcccCCccccCCC
Q psy1529           1 MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQ-HEPTLLMIKTTNNEVFGAYCSTKWGERNQKDERGN   79 (175)
Q Consensus         1 ~~~~~~~~L~~~lP~~~~~~~~~llyss~~hG~S~~~f~~~~~~-~gptllvik~~~g~vfGay~~~~w~~~~~~~~~~~   79 (175)
                      |+++++++|+.+||++++..+|+|||++++||+|+++|+++|.+ ++|||||||++++.|||||++++|+.         
T Consensus         8 Lt~~~~~~L~~~LP~~~~~~~w~LlYss~~hG~S~~~~~~~~~~~~~ptllvik~~~g~vFGaf~s~~w~~---------   78 (167)
T 4acj_A            8 LEAEQIEKLAKHLPPRTIGYPWNLAFSTSKHGMSIKTLYRAMQDQDSPMLLVIKDSDGQIFGALASEPFKV---------   78 (167)
T ss_dssp             CCHHHHHHHHTTSCGGGTTCCCEEEEEHHHHCSCHHHHHHHHTTCCSCEEEEEEETTSCEEEEEESSCCCC---------
T ss_pred             CCHHHHHHHHHHCchhhccCCCeEEEEeccCCccHHHHHHHhcCCCCCEEEEEEcCCceEEEEEeCCcccc---------
Confidence            78999999999999999999999999999999999999999998 69999999999999999999999975         


Q ss_pred             CCceecCCCeeEEEEcCCCCcCCCcccccccccccccceeEeeCCCeeeeecCCC-ceeEEeCccCCccccCCCCCCCCC
Q psy1529          80 RTAYFGTGETFLFSLYPERAKYPWVGVEQETQVSHANELFMAADQKMITIGGGEG-QAIWMDENIRYGKTDKCSTFNNPP  158 (175)
Q Consensus        80 ~~~~~G~~~~FLF~l~p~~~~y~~~~~~~~~~~~~~n~~~~~~~~~~i~~Ggg~~-~~l~id~~l~~g~s~~~~Tf~n~~  158 (175)
                      +..|||+++||||++.|+.++|+|++.         |++|+++++++|+|||++| ++||||++|.+|.|.+|+||+||+
T Consensus        79 ~~~~~G~~~sFLF~l~p~~~~y~~tg~---------N~~f~~~~~~~l~~Ggg~g~~~L~id~~l~~G~s~~c~Tf~n~~  149 (167)
T 4acj_A           79 SEGFYGTGETFLFTFYPEFEAYKWTGD---------NLFFIKGDMDSLAFGGGSGEFGLWLDGDLYHGRNHSCKTFGNPM  149 (167)
T ss_dssp             CSSCBCCTTCEEEECSSSCEEEECCSS---------CCCCEEEETTEEEESCSSSSCSEEEETTSCEEEECCBTTTTBCC
T ss_pred             cCcccCCCCeEEEEEcCCCccccccCC---------CceEEEeCCCccccCCCCCceEEEEeCCCCCEEeCCCCCCCCcc
Confidence            368999999999999999999999985         6789999999999999866 799999999999999999999999


Q ss_pred             CCCCCceEEeEEEEEeC
Q psy1529         159 LCVGGDFEIRVLEVYGV  175 (175)
Q Consensus       159 L~~~~~F~i~~iEVw~~  175 (175)
                      |+++++|+|.+||||+|
T Consensus       150 L~~~~~F~i~~vEvW~~  166 (167)
T 4acj_A          150 LSMKEDFFVQDIEIWSF  166 (167)
T ss_dssp             SSSSSEEEEEEEEEEEC
T ss_pred             cCCCCceEEEEEEEEEE
Confidence            99999999999999997




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00