Psyllid ID: psy15363

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD
Secondary Structure (PSIPRED)
ccHHHHHHHccccEEEEEEccHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHcccccEEEcccccccHHHHHHHHHHcccEEEEccccccccHHHHHHHHccccccccccHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHcccccEEEEEcccHHHHHHHHHHHHHccccHcHEEEccccccHHHHHHHHHHHEEEccccccccccHHHHHHccccEEccccHHHHHHHHHHHHHHcccccHEcccHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
msdifvlkavpNSILWLlkfpavgeANIQATAQALGLDQHRILFSNVAakeehvrrgqladvcldtplcnghttsmdvlwtgtpvvtlpgetLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD
Flexible Loop (DISEMBL)
MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAirlgtdrd
Low Complexity Region (SEG)
MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD
Disordered region (IsUnstruct)
***IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL*****
Disordered Region (DISOPRED)
MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD**
Disordered Region (DISEMBL)
MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD
Disordered Region (DISPRO)
*SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGT***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
P56558	1036	UDP-N-acetylglucosamine--	yes	N/A	0.946	0.118	0.772	2e-53
Q8CGY8	1046	UDP-N-acetylglucosamine--	yes	N/A	0.946	0.117	0.772	3e-53
P81436	1046	UDP-N-acetylglucosamine--	yes	N/A	0.946	0.117	0.772	4e-53
O15294	1046	UDP-N-acetylglucosamine--	yes	N/A	0.946	0.117	0.772	4e-53
Q27HV0	1046	UDP-N-acetylglucosamine--	yes	N/A	0.946	0.117	0.764	1e-52
O18158	1151	UDP-N-acetylglucosamine--	yes	N/A	0.976	0.110	0.700	5e-48
Q9M8Y0	977	Probable UDP-N-acetylgluc	yes	N/A	0.953	0.126	0.52	3e-30
A8BFN4	1480	UDP-N-acetylglucosamine--	N/A	N/A	0.946	0.083	0.392	3e-16
O82039	932	Probable UDP-N-acetylgluc	N/A	N/A	0.938	0.130	0.335	2e-10
Q8RVB2	931	Probable UDP-N-acetylgluc	N/A	N/A	0.946	0.132	0.338	2e-10

>sp|P56558|OGT1_RAT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1

 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 109/123 (88%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct: 854 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 913

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA++ +EY+DIA++L
Sbjct: 914 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKL 973

Query: 126 GTD 128
           GTD
Sbjct: 974 GTD 976

Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 5EC: 5

>sp|Q8CGY8|OGT1_MOUSE UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2

 Score =  206 bits (525), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 109/123 (88%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct: 864 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 923

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA++ +EY+DIA++L
Sbjct: 924 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKL 983

Query: 126 GTD 128
           GTD
Sbjct: 984 GTD 986

Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|P81436|OGT1_RABIT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Oryctolagus cuniculus GN=OGT PE=1 SV=2

 Score =  206 bits (524), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 108/123 (87%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct: 864 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 923

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +EY+DIA++L
Sbjct: 924 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKL 983

Query: 126 GTD 128
           GTD
Sbjct: 984 GTD 986

Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|O15294|OGT1_HUMAN UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3

 Score =  206 bits (524), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 108/123 (87%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct: 864 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 923

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +EY+DIA++L
Sbjct: 924 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKL 983

Query: 126 GTD 128
           GTD
Sbjct: 984 GTD 986

Isoform 2, the mitochondrial isoform (mOGT), is cytotoxic and triggers apoptosis in several cell types including INS1, an insulinoma cell line.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|Q27HV0|OGT1_PIG UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1

 Score =  204 bits (520), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/123 (76%), Positives = 108/123 (87%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct: 864 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 923

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +E++DIA++L
Sbjct: 924 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEFEDIAVKL 983

Query: 126 GTD 128
           GTD
Sbjct: 984 GTD 986

Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|O18158|OGT1_CAEEL UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase OS=Caenorhabditis elegans GN=ogt-1 PE=1 SV=2

 Score =  189 bits (480), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 89/127 (70%), Positives = 103/127 (81%)

Query: 4    IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC 63
            I +L+ VP SILWLL+FP  GE +I+      GLD  RI+FSNVAAKEEHVRRGQLADVC
Sbjct: 967  IKILENVPKSILWLLRFPYQGEEHIRKYCVERGLDPSRIVFSNVAAKEEHVRRGQLADVC 1026

Query: 64   LDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAI 123
            LDTPLCNGHTT MD+LWTGTP+VT+P E+LASRVA SQL  LG PEL+A+T +EY  IA+
Sbjct: 1027 LDTPLCNGHTTGMDILWTGTPMVTMPLESLASRVATSQLYALGVPELVAKTRQEYVSIAV 1086

Query: 124  RLGTDRD 130
            RLGTD D
Sbjct: 1087 RLGTDAD 1093

Addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC OS=Arabidopsis thaliana GN=SEC PE=2 SV=1

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 1/125 (0%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS LWLL+FPA GE   +  A A G+   +I+F++VA K EH+RR  LADV LD
Sbjct: 791 ILKRVPNSALWLLRFPAAGEMRFRTYAAAQGVQPDQIIFTDVAMKSEHIRRSVLADVILD 850

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQ-LATLGCPELIARTHKEYQDIAIR 124
           TPLCNGHTT  DVLW G P++TLP E +A+RVA S  LAT     +I  + +EY++ A+ 
Sbjct: 851 TPLCNGHTTGTDVLWAGVPMITLPLEKMATRVAGSLCLATGLGHGMIVNSLEEYEEKAVS 910

Query: 125 LGTDR 129
           L  ++
Sbjct: 911 LALNK 915

O-linked N-acetylglucosamine transferase (OGT) that mediates O-glycosylation of capsid protein (CP) of virus in case of infection by Plum pox virus. OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. Probably acts by adding O-linked sugars to yet unknown proteins. Its OGT activity has been proved in vitro but not in vivo. Required with SPY for gamete and seed development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A8BFN4|OGT1_GIAIC UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase OS=Giardia intestinalis (strain ATCC 50803 / WB clone C6) GN=GL50803_12081 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 2/125 (1%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLD-QHRILF-SNVAAKEEHVRRGQLADVC 63
            +L++VPN+   LLKFP   + +I+A  +    D   R++F S +  K EH+RR    DV 
Sbjct: 1284 LLRSVPNAYYALLKFPPASQLHIEAFFRHKAPDILDRVIFLSMLPMKVEHIRRYLAVDVF 1343

Query: 64   LDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAI 123
            +DT  CNG T  +D LW+G PVV   GE + SR   S L+ L C +LI  +  E   +  
Sbjct: 1344 VDTLKCNGSTIVLDALWSGVPVVGFVGEYILSRKTLSFLSVLECKDLICASQGEAVLLCT 1403

Query: 124  RLGTD 128
            RL  D
Sbjct: 1404 RLAVD 1408

Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc).

Giardia intestinalis (strain ATCC 50803 / WB clone C6) (taxid: 184922)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Petunia hybrida GN=SPY PE=2 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 6/128 (4%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQ----ATAQALGLDQHRI-LFSNVAAKEEHVRRGQLA 60
           +L AVP+S L ++K    G  +++    +  + LGL+  R+ L   +    +H++   L 
Sbjct: 682 ILCAVPHSRL-IVKCKPFGCDSVRQRFLSILEQLGLEPQRVDLVPLILLNHDHMQAYSLM 740

Query: 61  DVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQD 120
           D+ LDT    G TT+ + L+ G P VT+ G   A  V  S L T+G  +L+AR   EY +
Sbjct: 741 DISLDTFPYAGTTTTCESLYMGVPCVTMGGSVHAHNVGVSLLKTVGLRKLVARNEDEYVE 800

Query: 121 IAIRLGTD 128
           +AI+L +D
Sbjct: 801 LAIQLASD 808

Probable O-linked N-acetylglucosamine transferase (OGT) involved in various processes such as gibberellin (GA) signaling pathway. OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. Probably acts by adding O-linked sugars to yet unknown proteins.

Petunia hybrida (taxid: 4102)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8RVB2|SPY_SOLLC Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum GN=SPY PE=2 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQ---ATAQALGLDQHRI-LFSNVAAKEEHVRRGQLAD 61
           +L AVP+S L +   P   ++  Q   +  + LGL+  R+ L   +    +H++   L D
Sbjct: 682 ILSAVPHSRLIVKCKPFCCDSVRQRFLSILEQLGLEPQRVDLLPLILLNHDHMQAYSLMD 741

Query: 62  VCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDI 121
           + LDT    G TT+ + L+ G P VT+ G   A  V  S L T+G   L+AR   EY + 
Sbjct: 742 ISLDTFPYAGTTTTCESLYMGVPCVTMGGSVHAHNVGVSLLKTVGLENLVARNEDEYVES 801

Query: 122 AIRLGTD 128
           AI+L +D
Sbjct: 802 AIQLASD 808

Probable O-linked N-acetylglucosamine transferase (OGT) involved in various processes such as gibberellin (GA) signaling pathway. OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. Probably acts by adding O-linked sugars to yet unknown proteins.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
357612087	1054	hypothetical protein KGM_21815 [Danaus p	0.976	0.120	0.850	9e-60
340715916	1065	PREDICTED: UDP-N-acetylglucosamine--pept	0.961	0.117	0.888	2e-59
350396796	1065	PREDICTED: UDP-N-acetylglucosamine--pept	0.961	0.117	0.888	2e-59
328777929	1065	PREDICTED: UDP-N-acetylglucosamine--pept	0.961	0.117	0.888	2e-59
380019749	1065	PREDICTED: UDP-N-acetylglucosamine--pept	0.961	0.117	0.888	2e-59
380019747	1095	PREDICTED: UDP-N-acetylglucosamine--pept	0.961	0.114	0.888	2e-59
110760723	1095	PREDICTED: UDP-N-acetylglucosamine--pept	0.961	0.114	0.888	2e-59
340715918	1095	PREDICTED: UDP-N-acetylglucosamine--pept	0.961	0.114	0.888	2e-59
328700630	1045	PREDICTED: UDP-N-acetylglucosamine--pept	0.976	0.121	0.858	2e-59
383866051	1094	PREDICTED: UDP-N-acetylglucosamine--pept	0.961	0.114	0.888	2e-59

>gi|357612087|gb|EHJ67792.1| hypothetical protein KGM_21815 [Danaus plexippus]

 Score =  234 bits (597), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 108/127 (85%), Positives = 119/127 (93%)

Query: 4    IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC 63
            +++LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RI+FSNVAAKEEHVRRGQLADVC
Sbjct: 875  VYILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLPPGRIIFSNVAAKEEHVRRGQLADVC 934

Query: 64   LDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAI 123
            LDTPLCNGHTTSMD+LWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIA+
Sbjct: 935  LDTPLCNGHTTSMDILWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAV 994

Query: 124  RLGTDRD 130
            RLGTDR+
Sbjct: 995  RLGTDRE 1001

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715916|ref|XP_003396453.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 1 [Bombus terrestris]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
            +LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RILFSNVAAKEEHVRRGQLADVCLD
Sbjct: 877  ILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLAPGRILFSNVAAKEEHVRRGQLADVCLD 936

Query: 66   TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
            TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIAIRL
Sbjct: 937  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAIRL 996

Query: 126  GTDRD 130
            GTDR+
Sbjct: 997  GTDRE 1001

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350396796|ref|XP_003484668.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like [Bombus impatiens]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
            +LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RILFSNVAAKEEHVRRGQLADVCLD
Sbjct: 877  ILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLAPGRILFSNVAAKEEHVRRGQLADVCLD 936

Query: 66   TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
            TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIAIRL
Sbjct: 937  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAIRL 996

Query: 126  GTDRD 130
            GTDR+
Sbjct: 997  GTDRE 1001

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777929|ref|XP_003249419.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 1 [Apis mellifera]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
            +LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RILFSNVAAKEEHVRRGQLADVCLD
Sbjct: 877  ILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLAPGRILFSNVAAKEEHVRRGQLADVCLD 936

Query: 66   TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
            TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIAIRL
Sbjct: 937  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAIRL 996

Query: 126  GTDRD 130
            GTDR+
Sbjct: 997  GTDRE 1001

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380019749|ref|XP_003693765.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 2 [Apis florea]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
            +LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RILFSNVAAKEEHVRRGQLADVCLD
Sbjct: 877  ILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLAPGRILFSNVAAKEEHVRRGQLADVCLD 936

Query: 66   TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
            TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIAIRL
Sbjct: 937  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAIRL 996

Query: 126  GTDRD 130
            GTDR+
Sbjct: 997  GTDRE 1001

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380019747|ref|XP_003693764.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 1 [Apis florea]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
            +LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RILFSNVAAKEEHVRRGQLADVCLD
Sbjct: 907  ILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLAPGRILFSNVAAKEEHVRRGQLADVCLD 966

Query: 66   TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
            TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIAIRL
Sbjct: 967  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAIRL 1026

Query: 126  GTDRD 130
            GTDR+
Sbjct: 1027 GTDRE 1031

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110760723|ref|XP_623820.2| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 2 [Apis mellifera]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
            +LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RILFSNVAAKEEHVRRGQLADVCLD
Sbjct: 907  ILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLAPGRILFSNVAAKEEHVRRGQLADVCLD 966

Query: 66   TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
            TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIAIRL
Sbjct: 967  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAIRL 1026

Query: 126  GTDRD 130
            GTDR+
Sbjct: 1027 GTDRE 1031

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715918|ref|XP_003396454.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 2 [Bombus terrestris]

 Score =  233 bits (593), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
            +LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RILFSNVAAKEEHVRRGQLADVCLD
Sbjct: 907  ILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLAPGRILFSNVAAKEEHVRRGQLADVCLD 966

Query: 66   TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
            TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIAIRL
Sbjct: 967  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAIRL 1026

Query: 126  GTDRD 130
            GTDR+
Sbjct: 1027 GTDRE 1031

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328700630|ref|XP_001950113.2| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 1 [Acyrthosiphon pisum]

 Score =  233 bits (593), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/127 (85%), Positives = 121/127 (95%)

Query: 4   IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC 63
           + +LKAVPNS+LWLL+FPAVGE +IQ+TA +LG++  RILFSNVAAKEEHVRRGQLADVC
Sbjct: 865 VNILKAVPNSVLWLLRFPAVGETHIQSTAASLGIEPGRILFSNVAAKEEHVRRGQLADVC 924

Query: 64  LDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAI 123
           LDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIART +EYQDIAI
Sbjct: 925 LDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTREEYQDIAI 984

Query: 124 RLGTDRD 130
           RLGTD++
Sbjct: 985 RLGTDKE 991

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866051|ref|XP_003708485.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like [Megachile rotundata]

 Score =  233 bits (593), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 6    VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
            +LK VPNS+LWLL+FPAVGE N+QATAQ LGL   RILFSNVAAKEEHVRRGQLADVCLD
Sbjct: 907  ILKHVPNSVLWLLRFPAVGEPNLQATAQQLGLAPGRILFSNVAAKEEHVRRGQLADVCLD 966

Query: 66   TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
            TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL TLGCPELIART +EYQDIAIRL
Sbjct: 967  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLNTLGCPELIARTRQEYQDIAIRL 1026

Query: 126  GTDRD 130
            GTDR+
Sbjct: 1027 GTDRE 1031

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
FB|FBgn0261403	1059	sxc "super sex combs" [Drosoph	0.961	0.118	0.8	1.5e-50
UNIPROTKB|F1NX56	1035	OGT "Uncharacterized protein"	0.946	0.118	0.780	5.4e-48
ZFIN|ZDB-GENE-030131-9631	1062	ogt.1 "O-linked N-acetylglucos	0.961	0.117	0.752	9.5e-48
RGD|62060	1036	Ogt "O-linked N-acetylglucosam	0.946	0.118	0.772	1.1e-47
MGI|MGI:1339639	1046	Ogt "O-linked N-acetylglucosam	0.946	0.117	0.772	1.2e-47
UNIPROTKB|A5D7G1	1036	OGT "OGT protein" [Bos taurus	0.946	0.118	0.772	1.4e-47
UNIPROTKB|O15294	1046	OGT "UDP-N-acetylglucosamine--	0.946	0.117	0.772	1.5e-47
UNIPROTKB|F1RSV2	1046	OGT "UDP-N-acetylglucosamine--	0.946	0.117	0.772	1.5e-47
UNIPROTKB|P81436	1046	OGT "UDP-N-acetylglucosamine--	0.946	0.117	0.772	1.5e-47
ZFIN|ZDB-GENE-051128-1	1102	ogt.2 "O-linked N-acetylglucos	0.961	0.113	0.76	2.2e-47

FB|FBgn0261403 sxc "super sex combs" [Drosophila melanogaster (taxid:7227)]

 Score = 535 (193.4 bits), Expect = 1.5e-50, P = 1.5e-50
 Identities = 100/125 (80%), Positives = 112/125 (89%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VP S+LWLL+FPAVGE NI+ T    G+   R++FSNVAAKEEHVRRGQLAD+CLD
Sbjct:   884 ILKNVPKSVLWLLRFPAVGEQNIKKTVSDFGISPDRVIFSNVAAKEEHVRRGQLADICLD 943

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIART +EYQ+IAIRL
Sbjct:   944 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTREEYQNIAIRL 1003

Query:   126 GTDRD 130
             GT ++
Sbjct:  1004 GTKKE 1008

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=NAS

GO:0006486 "protein glycosylation" evidence=IMP

GO:0035220 "wing disc development" evidence=IMP

GO:0008375 "acetylglucosaminyltransferase activity" evidence=IMP

UNIPROTKB|F1NX56 OGT "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 511 (184.9 bits), Expect = 5.4e-48, P = 5.4e-48
 Identities = 96/123 (78%), Positives = 109/123 (88%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS+LWLL+FPAVGE NIQ  AQ LGL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   853 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNLGLSQNRIIFSPVAPKEEHVRRGQLADVCLD 912

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA++ +EY+DIA++L
Sbjct:   913 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKL 972

Query:   126 GTD 128
             GTD
Sbjct:   973 GTD 975

GO:0000123 "histone acetyltransferase complex" evidence=IEA

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006110 "regulation of glycolysis" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0030854 "positive regulation of granulocyte differentiation" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0035020 "regulation of Rac protein signal transduction" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0046626 "regulation of insulin receptor signaling pathway" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0048015 "phosphatidylinositol-mediated signaling" evidence=IEA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IEA

GO:0070688 "MLL5-L complex" evidence=IEA

GO:0071300 "cellular response to retinoic acid" evidence=IEA

ZFIN|ZDB-GENE-030131-9631 ogt.1 "O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 1" [Danio rerio (taxid:7955)]

 Score = 509 (184.2 bits), Expect = 9.5e-48, P = 9.5e-48
 Identities = 94/125 (75%), Positives = 109/125 (87%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS++WLL+FPAVGE NIQ  AQ LGL   RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   878 ILKRVPNSVIWLLRFPAVGEPNIQQYAQNLGLPASRIIFSPVAPKEEHVRRGQLADVCLD 937

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGCPELIA++ +EY+D+A++L
Sbjct:   938 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCPELIAQSRQEYEDVAVKL 997

Query:   126 GTDRD 130
             GTD +
Sbjct:   998 GTDME 1002

GO:0016262 "protein N-acetylglucosaminyltransferase activity" evidence=IMP;IDA

GO:0006493 "protein O-linked glycosylation" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

RGD|62060 Ogt "O-linked N-acetylglucosamine (GlcNAc) transferase" [Rattus norvegicus (taxid:10116)]

 Score = 508 (183.9 bits), Expect = 1.1e-47, P = 1.1e-47
 Identities = 95/123 (77%), Positives = 109/123 (88%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   854 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 913

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA++ +EY+DIA++L
Sbjct:   914 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKL 973

Query:   126 GTD 128
             GTD
Sbjct:   974 GTD 976

GO:0000123 "histone acetyltransferase complex" evidence=IEA;ISO;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA;ISO;ISS

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005813 "centrosome" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=IEA;ISO;ISS

GO:0006110 "regulation of glycolysis" evidence=IEA;ISO;ISS

GO:0006493 "protein O-linked glycosylation" evidence=ISO;IDA

GO:0006917 "induction of apoptosis" evidence=IEA;ISO;ISS

GO:0008047 "enzyme activator activity" evidence=IEA;ISO

GO:0016262 "protein N-acetylglucosaminyltransferase activity" evidence=ISO;IDA

GO:0030854 "positive regulation of granulocyte differentiation" evidence=IEA;ISO

GO:0032868 "response to insulin stimulus" evidence=IEA;ISO

GO:0035020 "regulation of Rac protein signal transduction" evidence=IEA;ISO

GO:0042277 "peptide binding" evidence=IDA

GO:0043085 "positive regulation of catalytic activity" evidence=ISO

GO:0043981 "histone H4-K5 acetylation" evidence=ISO;ISS

GO:0043982 "histone H4-K8 acetylation" evidence=ISO;ISS

GO:0043984 "histone H4-K16 acetylation" evidence=ISO;ISS

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA;ISO;ISS

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA;ISO;ISS

GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO;ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0046626 "regulation of insulin receptor signaling pathway" evidence=IEA;ISO

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA;ISO;ISS

GO:0048015 "phosphatidylinositol-mediated signaling" evidence=IEA;ISO;ISS

GO:0048029 "monosaccharide binding" evidence=IDA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IEA;ISO

GO:0070207 "protein homotrimerization" evidence=IDA

GO:0070688 "MLL5-L complex" evidence=IEA;ISO

GO:0071300 "cellular response to retinoic acid" evidence=IEA;ISO

GO:0080182 "histone H3-K4 trimethylation" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

MGI|MGI:1339639 Ogt "O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)" [Mus musculus (taxid:10090)]

 Score = 508 (183.9 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 95/123 (77%), Positives = 109/123 (88%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   864 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 923

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA++ +EY+DIA++L
Sbjct:   924 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKL 983

Query:   126 GTD 128
             GTD
Sbjct:   984 GTD 986

GO:0000123 "histone acetyltransferase complex" evidence=ISO

GO:0003824 "catalytic activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=ISO

GO:0005622 "intracellular" evidence=TAS

GO:0005634 "nucleus" evidence=ISO;TAS

GO:0005737 "cytoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0006110 "regulation of glycolysis" evidence=ISO

GO:0006493 "protein O-linked glycosylation" evidence=ISO;ISS;IDA;TAS

GO:0006917 "induction of apoptosis" evidence=ISO

GO:0008047 "enzyme activator activity" evidence=ISO

GO:0008080 "N-acetyltransferase activity" evidence=TAS

GO:0008289 "lipid binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016262 "protein N-acetylglucosaminyltransferase activity" evidence=ISO

GO:0016568 "chromatin modification" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0030854 "positive regulation of granulocyte differentiation" evidence=ISO

GO:0032868 "response to insulin stimulus" evidence=ISO

GO:0035020 "regulation of Rac protein signal transduction" evidence=ISO

GO:0042277 "peptide binding" evidence=ISO

GO:0043085 "positive regulation of catalytic activity" evidence=ISO

GO:0043981 "histone H4-K5 acetylation" evidence=ISO

GO:0043982 "histone H4-K8 acetylation" evidence=ISO

GO:0043984 "histone H4-K16 acetylation" evidence=ISO

GO:0045862 "positive regulation of proteolysis" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0046626 "regulation of insulin receptor signaling pathway" evidence=ISO

GO:0048015 "phosphatidylinositol-mediated signaling" evidence=ISO

GO:0048029 "monosaccharide binding" evidence=ISO

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISO

GO:0070207 "protein homotrimerization" evidence=ISO

GO:0070688 "MLL5-L complex" evidence=ISO

GO:0071300 "cellular response to retinoic acid" evidence=ISO

GO:0080182 "histone H3-K4 trimethylation" evidence=ISO

UNIPROTKB|A5D7G1 OGT "OGT protein" [Bos taurus (taxid:9913)]

 Score = 507 (183.5 bits), Expect = 1.4e-47, P = 1.4e-47
 Identities = 95/123 (77%), Positives = 108/123 (87%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   854 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 913

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +EY+DIA++L
Sbjct:   914 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKL 973

Query:   126 GTD 128
             GTD
Sbjct:   974 GTD 976

GO:0071300 "cellular response to retinoic acid" evidence=IEA

GO:0070688 "MLL5-L complex" evidence=IEA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IEA

GO:0048015 "phosphatidylinositol-mediated signaling" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0046626 "regulation of insulin receptor signaling pathway" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0035020 "regulation of Rac protein signal transduction" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0030854 "positive regulation of granulocyte differentiation" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006110 "regulation of glycolysis" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA

GO:0000123 "histone acetyltransferase complex" evidence=IEA

UNIPROTKB|O15294 OGT "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit" [Homo sapiens (taxid:9606)]

 Score = 507 (183.5 bits), Expect = 1.5e-47, P = 1.5e-47
 Identities = 95/123 (77%), Positives = 108/123 (87%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   864 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 923

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +EY+DIA++L
Sbjct:   924 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKL 983

Query:   126 GTD 128
             GTD
Sbjct:   984 GTD 986

GO:0006915 "apoptotic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016262 "protein N-acetylglucosaminyltransferase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0045862 "positive regulation of proteolysis" evidence=IDA

GO:0006493 "protein O-linked glycosylation" evidence=IMP;IDA

GO:0070688 "MLL5-L complex" evidence=IDA

GO:0043984 "histone H4-K16 acetylation" evidence=IDA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IDA

GO:0000123 "histone acetyltransferase complex" evidence=IDA

GO:0043981 "histone H4-K5 acetylation" evidence=IDA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IDA

GO:0043982 "histone H4-K8 acetylation" evidence=IDA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IDA

GO:0048015 "phosphatidylinositol-mediated signaling" evidence=IDA

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0035020 "regulation of Rac protein signal transduction" evidence=IDA

GO:0032868 "response to insulin stimulus" evidence=IDA

GO:0046626 "regulation of insulin receptor signaling pathway" evidence=IDA

GO:0006917 "induction of apoptosis" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP;IDA

GO:0080182 "histone H3-K4 trimethylation" evidence=IMP

GO:0006110 "regulation of glycolysis" evidence=IDA

GO:0007165 "signal transduction" evidence=TAS

GO:0007584 "response to nutrient" evidence=TAS

GO:0008375 "acetylglucosaminyltransferase activity" evidence=TAS

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IDA

GO:0008047 "enzyme activator activity" evidence=IDA

GO:0030854 "positive regulation of granulocyte differentiation" evidence=IMP

GO:0071300 "cellular response to retinoic acid" evidence=IMP

GO:0043085 "positive regulation of catalytic activity" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

UNIPROTKB|F1RSV2 OGT "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit" [Sus scrofa (taxid:9823)]

 Score = 507 (183.5 bits), Expect = 1.5e-47, P = 1.5e-47
 Identities = 95/123 (77%), Positives = 108/123 (87%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   864 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 923

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +EY+DIA++L
Sbjct:   924 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKL 983

Query:   126 GTD 128
             GTD
Sbjct:   984 GTD 986

GO:0071300 "cellular response to retinoic acid" evidence=IEA

GO:0070688 "MLL5-L complex" evidence=IEA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IEA

GO:0048015 "phosphatidylinositol-mediated signaling" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0046626 "regulation of insulin receptor signaling pathway" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0035020 "regulation of Rac protein signal transduction" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0030854 "positive regulation of granulocyte differentiation" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006110 "regulation of glycolysis" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA

GO:0000123 "histone acetyltransferase complex" evidence=IEA

UNIPROTKB|P81436 OGT "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit" [Oryctolagus cuniculus (taxid:9986)]

 Score = 507 (183.5 bits), Expect = 1.5e-47, P = 1.5e-47
 Identities = 95/123 (77%), Positives = 108/123 (87%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   864 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 923

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +EY+DIA++L
Sbjct:   924 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKL 983

Query:   126 GTD 128
             GTD
Sbjct:   984 GTD 986

GO:0000123 "histone acetyltransferase complex" evidence=ISS

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0006110 "regulation of glycolysis" evidence=ISS

GO:0006493 "protein O-linked glycosylation" evidence=ISS

GO:0006917 "induction of apoptosis" evidence=ISS

GO:0016262 "protein N-acetylglucosaminyltransferase activity" evidence=ISS

GO:0043981 "histone H4-K5 acetylation" evidence=ISS

GO:0043982 "histone H4-K8 acetylation" evidence=ISS

GO:0043984 "histone H4-K16 acetylation" evidence=ISS

GO:0048015 "phosphatidylinositol-mediated signaling" evidence=ISS

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=ISS

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=ISS

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=ISS

ZFIN|ZDB-GENE-051128-1 ogt.2 "O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 2" [Danio rerio (taxid:7955)]

 Score = 506 (183.2 bits), Expect = 2.2e-47, P = 2.2e-47
 Identities = 95/125 (76%), Positives = 108/125 (86%)

Query:     6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
             +LK VPNS++WLL+FPAVGE NIQ  AQ LGL   RI+FS VA KEEHVRRGQLADVCLD
Sbjct:   918 ILKRVPNSVIWLLRFPAVGEPNIQQYAQNLGLPASRIIFSPVAPKEEHVRRGQLADVCLD 977

Query:    66 TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
             TPLCNGHTT MDVLW GTP+VT+PGETLAS VAASQL  LGCPELIAR+ +EY+DIA++L
Sbjct:   978 TPLCNGHTTGMDVLWAGTPMVTMPGETLASCVAASQLTCLGCPELIARSRQEYEDIAVKL 1037

Query:   126 GTDRD 130
             GTD +
Sbjct:  1038 GTDME 1042

GO:0016262 "protein N-acetylglucosaminyltransferase activity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O18158	OGT1_CAEEL	2, ., 4, ., 1, ., -	0.7007	0.9769	0.1103	yes	N/A
Q27HV0	OGT1_PIG	2, ., 4, ., 1, ., 2, 5, 5	0.7642	0.9461	0.1175	yes	N/A
P81436	OGT1_RABIT	2, ., 4, ., 1, ., 2, 5, 5	0.7723	0.9461	0.1175	yes	N/A
O15294	OGT1_HUMAN	2, ., 4, ., 1, ., 2, 5, 5	0.7723	0.9461	0.1175	yes	N/A
Q8CGY8	OGT1_MOUSE	2, ., 4, ., 1, ., 2, 5, 5	0.7723	0.9461	0.1175	yes	N/A
P56558	OGT1_RAT	2, ., 4, ., 1, ., 2, 5, 5	0.7723	0.9461	0.1187	yes	N/A
Q9M8Y0	SEC_ARATH	2, ., 4, ., 1, ., -	0.52	0.9538	0.1269	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	130
pfam13844	468	pfam13844, Glyco_transf_41, Glycosyl transferase f	3e-84
COG3914	620	COG3914, Spy, Predicted O-linked N-acetylglucosami	3e-32

>gnl|CDD|206015 pfam13844, Glyco_transf_41, Glycosyl transferase family 41

 Score =  253 bits (647), Expect = 3e-84
 Identities = 99/125 (79%), Positives = 112/125 (89%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS+LWLL+FPAVGEANIQA AQ +GL   RI+FSNVA KEEHVRRGQLADVCLD
Sbjct: 308 ILKRVPNSVLWLLRFPAVGEANIQAYAQEMGLPPRRIVFSNVAPKEEHVRRGQLADVCLD 367

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           TPLCNGHTT MDVLW GTP+VT+P ETLASRVAASQL TLGCPELIA+  +EY+DIA++L
Sbjct: 368 TPLCNGHTTGMDVLWAGTPMVTMPLETLASRVAASQLTTLGCPELIAKDRQEYEDIAVKL 427

Query: 126 GTDRD 130
           GTDR+
Sbjct: 428 GTDRE 432

This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. Length = 468

>gnl|CDD|226428 COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

 Score =  118 bits (298), Expect = 3e-32
 Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 6   VLKAVPNSILWLLKFPAVGE--ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC 63
           +L AVPNS+L L       E  A ++  A+  G+D  R+ F   A  E+H  R  +AD+ 
Sbjct: 453 ILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLV 512

Query: 64  LDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAI 123
           LDT    GHTT+ D LW G PV+T  GE  ASR  AS     G PEL+A +  +Y + A+
Sbjct: 513 LDTYPYGGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVADSRADYVEKAV 572

Query: 124 RLGTDR 129
             G+DR
Sbjct: 573 AFGSDR 578

Length = 620

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	100.0
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	99.98
KOG4626|consensus	966		99.95
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	99.78
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	99.74
cd03796	398	GT1_PIG-A_like This family is most closely related	99.74
cd03806	419	GT1_ALG11_like This family is most closely related	99.73
cd03818	396	GT1_ExpC_like This family is most closely related	99.73
cd03812	358	GT1_CapH_like This family is most closely related	99.7
cd03805	392	GT1_ALG2_like This family is most closely related	99.7
PLN02846	462	digalactosyldiacylglycerol synthase	99.7
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	99.7
cd03816	415	GT1_ALG1_like This family is most closely related	99.7
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	99.69
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	99.69
PLN02949	463	transferase, transferring glycosyl groups	99.68
cd03821	375	GT1_Bme6_like This family is most closely related	99.67
PLN02275	371	transferase, transferring glycosyl groups	99.67
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	99.67
cd03817	374	GT1_UGDG_like This family is most closely related	99.67
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	99.67
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	99.66
PLN02501	794	digalactosyldiacylglycerol synthase	99.66
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	99.65
KOG1111|consensus	426		99.65
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	99.65
cd04949	372	GT1_gtfA_like This family is most closely related	99.65
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	99.64
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	99.64
cd03795	357	GT1_like_4 This family is most closely related to	99.62
cd03820	348	GT1_amsD_like This family is most closely related	99.62
cd03800	398	GT1_Sucrose_synthase This family is most closely r	99.62
cd04946	407	GT1_AmsK_like This family is most closely related	99.62
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	99.62
cd04962	371	GT1_like_5 This family is most closely related to	99.62
cd03804	351	GT1_wbaZ_like This family is most closely related	99.62
cd03813	475	GT1_like_3 This family is most closely related to	99.62
cd03801	374	GT1_YqgM_like This family is most closely related	99.61
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.6
cd03822	366	GT1_ecORF704_like This family is most closely rela	99.6
PRK10307	412	putative glycosyl transferase; Provisional	99.6
cd03802	335	GT1_AviGT4_like This family is most closely relate	99.58
cd03798	377	GT1_wlbH_like This family is most closely related	99.57
cd03814	364	GT1_like_2 This family is most closely related to	99.56
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	99.56
cd04951	360	GT1_WbdM_like This family is most closely related	99.56
cd03809	365	GT1_mtfB_like This family is most closely related	99.55
cd03819	355	GT1_WavL_like This family is most closely related	99.54
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.52
cd03808	359	GT1_cap1E_like This family is most closely related	99.52
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	99.52
cd03823	359	GT1_ExpE7_like This family is most closely related	99.52
cd03811	353	GT1_WabH_like This family is most closely related	99.52
cd03807	365	GT1_WbnK_like This family is most closely related	99.52
cd04955	363	GT1_like_6 This family is most closely related to	99.51
cd03794	394	GT1_wbuB_like This family is most closely related	99.51
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.5
TIGR02470	784	sucr_synth sucrose synthase. This model represents	99.49
PLN00142	815	sucrose synthase	99.49
cd03825	365	GT1_wcfI_like This family is most closely related	99.46
PHA01633	335	putative glycosyl transferase group 1	99.46
PHA01630	331	putative group 1 glycosyl transferase	99.46
PLN02939	977	transferase, transferring glycosyl groups	99.42
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	99.41
PRK14098	489	glycogen synthase; Provisional	99.39
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.38
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.37
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.36
PRK00654	466	glgA glycogen synthase; Provisional	99.35
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	99.34
PLN02316	1036	synthase/transferase	99.32
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.32
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.27
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.27
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	99.25
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.25
PRK14099	485	glycogen synthase; Provisional	99.23
PLN02605	382	monogalactosyldiacylglycerol synthase	99.23
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.22
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.2
PRK10125	405	putative glycosyl transferase; Provisional	99.2
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.12
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.11
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.06
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.04
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.01
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.0
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	98.99
KOG0853|consensus	495		98.92
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	98.91
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	98.87
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	98.84
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	98.64
KOG1387|consensus	465		98.62
TIGR03492	396	conserved hypothetical protein. This protein famil	98.33
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	98.3
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	98.17
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	98.1
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	98.08
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	98.08
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	98.06
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	98.03
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	97.96
KOG2941|consensus	444		97.92
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	97.87
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	97.81
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	97.79
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	97.78
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	97.72
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	97.55
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	97.49
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	97.38
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	97.31
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	97.3
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.21
PLN02167	475	UDP-glycosyltransferase family protein	96.98
PLN03004	451	UDP-glycosyltransferase	96.96
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	96.95
PLN02562	448	UDP-glycosyltransferase	96.94
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	96.89
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	96.88
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	96.75
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	96.69
PLN02173	449	UDP-glucosyl transferase family protein	96.64
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	96.59
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	96.56
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	96.54
PRK10017	426	colanic acid biosynthesis protein; Provisional	96.5
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	96.5
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	96.48
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	96.44
PLN02448	459	UDP-glycosyltransferase family protein	96.42
PLN02992	481	coniferyl-alcohol glucosyltransferase	96.34
PLN02210	456	UDP-glucosyl transferase	96.31
PLN02555	480	limonoid glucosyltransferase	96.28
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	96.27
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	96.26
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	96.23
PRK14089	347	ipid-A-disaccharide synthase; Provisional	96.21
PLN03007	482	UDP-glucosyltransferase family protein	96.2
PLN02670	472	transferase, transferring glycosyl groups	96.19
PLN02554	481	UDP-glycosyltransferase family protein	96.14
PLN02208	442	glycosyltransferase family protein	96.06
PLN02152	455	indole-3-acetate beta-glucosyltransferase	96.05
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	96.01
PLN02207	468	UDP-glycosyltransferase	95.98
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	95.96
PLN00414	446	glycosyltransferase family protein	95.86
PLN00164	480	glucosyltransferase; Provisional	95.83
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	95.76
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	95.69
PLN02764	453	glycosyltransferase family protein	95.65
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	95.39
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	95.31
PLN02534	491	UDP-glycosyltransferase	94.76
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	94.6
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	94.44
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	94.15
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	93.72
PLN03015	470	UDP-glucosyl transferase	93.16
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	93.06
TIGR01012	196	Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archa	92.64
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	92.62
COG2327	385	WcaK Polysaccharide pyruvyl transferase family pro	92.55
PRK10494	259	hypothetical protein; Provisional	92.55
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	91.66
KOG1192|consensus	496		91.47
PTZ00254	249	40S ribosomal protein SA; Provisional	91.09
PRK04020	204	rps2P 30S ribosomal protein S2; Provisional	91.03
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	90.88
PRK10117	474	trehalose-6-phosphate synthase; Provisional	90.82
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	90.81
cd05565	99	PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of en	90.61
COG0673	342	MviM Predicted dehydrogenases and related proteins	90.58
PF10093	374	DUF2331: Uncharacterized protein conserved in bact	90.47
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	90.45
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	90.43
TIGR01761	343	thiaz-red thiazolinyl imide reductase. This reduct	90.06
PF11071	141	DUF2872: Protein of unknown function (DUF2872); In	90.02
COG3563	671	KpsC Capsule polysaccharide export protein [Cell e	89.64
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	89.62
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	89.49
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	89.43
TIGR00725	159	conserved hypothetical protein, DprA/Smf-related,	89.07
COG4671	400	Predicted glycosyl transferase [General function p	88.91
COG4394	370	Uncharacterized protein conserved in bacteria [Fun	88.43
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	88.29
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	88.09
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	87.97
cd03129	210	GAT1_Peptidase_E_like Type 1 glutamine amidotransf	87.85
PF09949	100	DUF2183: Uncharacterized conserved protein (DUF218	87.77
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	87.32
COG0062	203	Uncharacterized conserved protein [Function unknow	86.8
cd05564	96	PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lic	86.53
TIGR03837	371	efp_adjacent_2 conserved hypothetical protein, PP_	86.18
KOG0832|consensus	251		85.93
COG1817	346	Uncharacterized protein conserved in archaea [Func	85.9
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	85.68
TIGR00036	266	dapB dihydrodipicolinate reductase.	84.82
TIGR03646	144	YtoQ_fam YtoQ family protein. Members of this fami	84.38
COG1152	772	CdhA CO dehydrogenase/acetyl-CoA synthase alpha su	84.19
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	84.17
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	84.11
cd01425	193	RPS2 Ribosomal protein S2 (RPS2), involved in form	83.98
COG1135	339	AbcC ABC-type metal ion transport system, ATPase c	83.03
KOG1387|consensus	465		82.93
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	82.75
PRK06270	341	homoserine dehydrogenase; Provisional	82.24
TIGR00853	95	pts-lac PTS system, lactose/cellobiose family IIB	82.17
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	82.1
KOG3349|consensus	170		81.95
PRK14046	392	malate--CoA ligase subunit beta; Provisional	81.9
TIGR01361	260	DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate	81.82
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	81.2
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	81.0
PRK13397	250	3-deoxy-7-phosphoheptulonate synthase; Provisional	80.93

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=100.00  E-value=3.4e-36  Score=241.70  Aligned_cols=130  Identities=60%  Similarity=0.904  Sum_probs=107.1

Q ss_pred             ChHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          1 MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         1 ~~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      ++|++||+++|+++|++...+...++.+++.++++|++++||+|.+..++++|+..|+.+||+|||+|++||+|++||||
T Consensus       303 ~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALw  382 (468)
T PF13844_consen  303 DLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQLADICLDTFPYNGGTTTLDALW  382 (468)
T ss_dssp             HHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG-SEEE--SSS--SHHHHHHHH
T ss_pred             HHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHH
Confidence            37999999999999999886545678999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      ||+||||++|+.+++|+++++|+.+|++|||+.|.++|+++|++|++|++
T Consensus       383 mGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~La~D~~  432 (468)
T PF13844_consen  383 MGVPVVTLPGETMASRVGASILRALGLPELIADSEEEYVEIAVRLATDPE  432 (468)
T ss_dssp             HT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHHHH-HH
T ss_pred             cCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHHhCCHH
Confidence            99999999999999999999999999999999999999999999999864

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=99.98  E-value=4.1e-32  Score=219.34  Aligned_cols=127  Identities=40%  Similarity=0.574  Sum_probs=121.5

Q ss_pred             hHHHHHhhCCCcEEEEeecCccc---HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVG---EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDV   78 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~---~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEA   78 (130)
                      .|.+|++.+||++|++.++ |++   ..++++++++.|++.+|++|++..+.++|.+.|+.+|+|||||||++++|++||
T Consensus       449 ~wmqIL~~vP~Svl~L~~~-~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY~g~TTa~da  527 (620)
T COG3914         449 LWMQILSAVPNSVLLLKAG-GDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPYGGHTTASDA  527 (620)
T ss_pred             HHHHHHHhCCCcEEEEecC-CCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccCCCccchHHH
Confidence            6999999999999999996 343   568999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         79 LWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        79 la~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      +|||+||||..|+.+++|.+++|+...|++|+|++|.++|+++|+++++|.
T Consensus       528 Lwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~s~~dYV~~av~~g~dr  578 (620)
T COG3914         528 LWMGVPVLTRVGEQFASRNGASIATNAGIPELVADSRADYVEKAVAFGSDR  578 (620)
T ss_pred             HHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcCCHHHHHHHHHHhcccH
Confidence            999999999999999999999999999999999999999999999999985

>KOG4626|consensus

Probab=99.95  E-value=3.4e-28  Score=198.31  Aligned_cols=130  Identities=67%  Similarity=1.070  Sum_probs=124.9

Q ss_pred             ChHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          1 MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         1 ~~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      ++|++||+++||++||+...+.-++++++..+.++|++++||+|.+-...+|+.+.++.+||+|||++++|.+|.+|.+|
T Consensus       777 ~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~LDTplcnGhTTg~dvLw  856 (966)
T KOG4626|consen  777 QMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDVLW  856 (966)
T ss_pred             HHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhcccCcCcCCcccchhhhc
Confidence            58999999999999999998666788999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      +|+|+||++|+.+++|+++|++..+|++++|+.+.+||+++|++|+.|.+
T Consensus       857 ~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV~Latd~~  906 (966)
T KOG4626|consen  857 AGVPMVTMPGETLASRVAASLLTALGLGHLIAKNREEYVQIAVRLATDKE  906 (966)
T ss_pred             cCCceeecccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHHHHhhcCHH
Confidence            99999999999999999999999999999999999999999999999853

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=99.78  E-value=1.7e-18  Score=137.91  Aligned_cols=121  Identities=12%  Similarity=0.063  Sum_probs=99.8

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-------CCCchH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-------CNGHTT   74 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-------~~~g~~   74 (130)
                      +++++.++.|+.+++++|+ |+.++.++++++++|++ ++|.|+|+++.+++..+|+.||+|+.|+.       ++.|++
T Consensus       243 a~~~l~~~~~~~~l~ivG~-G~~~~~l~~~~~~~~l~-~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~  320 (406)
T PRK15427        243 ACRQLKEQGVAFRYRILGI-GPWERRLRTLIEQYQLE-DVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVA  320 (406)
T ss_pred             HHHHHHhhCCCEEEEEEEC-chhHHHHHHHHHHcCCC-CeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHH
Confidence            4566777789999999996 67888999999999997 99999999999999999999999998874       567999


Q ss_pred             HHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhcc-CCC
Q psy15363         75 SMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT-DRD  130 (130)
Q Consensus        75 ~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~-d~e  130 (130)
                      ++|||+||+|||+++......     ++ ..|..+++.  .|.+++.+...++++ |++
T Consensus       321 llEAma~G~PVI~t~~~g~~E-----~v-~~~~~G~lv~~~d~~~la~ai~~l~~~d~~  373 (406)
T PRK15427        321 LMEAMAVGIPVVSTLHSGIPE-----LV-EADKSGWLVPENDAQALAQRLAAFSQLDTD  373 (406)
T ss_pred             HHHHHhCCCCEEEeCCCCchh-----hh-cCCCceEEeCCCCHHHHHHHHHHHHhCCHH
Confidence            999999999999986543222     22 225566655  489999999999988 763

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.74  E-value=2.3e-17  Score=127.08  Aligned_cols=121  Identities=21%  Similarity=0.187  Sum_probs=97.6

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-------CCCchH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-------CNGHTT   74 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-------~~~g~~   74 (130)
                      ++.++.++.|+.+|+++|. ++..+.++++++++|+. ++|+|.|.++.+++..+|+.+|+++.|+.       +++|++
T Consensus       209 a~~~l~~~~~~~~l~ivG~-g~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~  286 (367)
T cd05844         209 AFARLARRVPEVRLVIIGD-GPLLAALEALARALGLG-GRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVV  286 (367)
T ss_pred             HHHHHHHhCCCeEEEEEeC-chHHHHHHHHHHHcCCC-CeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchH
Confidence            4667778889999999996 57778899999999997 99999999999999999999999998763       467999


Q ss_pred             HHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         75 SMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        75 ~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ++|||+||+|||+.+......     ++.. +-.+++.  .|.+++++...++++|++
T Consensus       287 ~~EA~a~G~PvI~s~~~~~~e-----~i~~-~~~g~~~~~~d~~~l~~~i~~l~~~~~  338 (367)
T cd05844         287 LLEAQASGVPVVATRHGGIPE-----AVED-GETGLLVPEGDVAALAAALGRLLADPD  338 (367)
T ss_pred             HHHHHHcCCCEEEeCCCCchh-----heec-CCeeEEECCCCHHHHHHHHHHHHcCHH
Confidence            999999999999987653322     2211 3334444  488899999999888763

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.74  E-value=2.9e-17  Score=129.67  Aligned_cols=120  Identities=12%  Similarity=-0.042  Sum_probs=96.8

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      ++..+.++.|+.+|+++|. ++..+.++++++++|++ ++|.|+|.++.+++..+|+.+|+++.|+. +++|++++|||+
T Consensus       214 a~~~l~~~~~~~~l~i~G~-g~~~~~l~~~~~~~~l~-~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma  291 (398)
T cd03796         214 IIPEICKKHPNVRFIIGGD-GPKRILLEEMREKYNLQ-DRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAAS  291 (398)
T ss_pred             HHHHHHhhCCCEEEEEEeC-CchHHHHHHHHHHhCCC-CeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHH
Confidence            4666777889999999996 57778899999999997 99999999999999999999999988874 577999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+.+......     ++.. |-.-++..|.+++.+...++++++
T Consensus       292 ~G~PVI~s~~gg~~e-----~i~~-~~~~~~~~~~~~l~~~l~~~l~~~  334 (398)
T cd03796         292 CGLLVVSTRVGGIPE-----VLPP-DMILLAEPDVESIVRKLEEAISIL  334 (398)
T ss_pred             cCCCEEECCCCCchh-----heeC-CceeecCCCHHHHHHHHHHHHhCh
Confidence            999999986543322     2221 222345568888888888887753

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.73  E-value=3.7e-17  Score=130.72  Aligned_cols=123  Identities=18%  Similarity=0.126  Sum_probs=97.7

Q ss_pred             hHHHHHhhCCC-----cEEEEeecCcc-----cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CC
Q psy15363          2 SDIFVLKAVPN-----SILWLLKFPAV-----GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CN   70 (130)
Q Consensus         2 ~w~~il~~~P~-----a~l~i~g~~~~-----~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~   70 (130)
                      +|+++.++.|+     .+|+|+|++..     ..+.|+++++++|++ ++|+|+|.++.+++..+|+.||+++.|+. ++
T Consensus       258 A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~-~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~  336 (419)
T cd03806         258 AFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLE-DKVEFVVNAPFEELLEELSTASIGLHTMWNEH  336 (419)
T ss_pred             HHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCC-CeEEEecCCCHHHHHHHHHhCeEEEECCccCC
Confidence            57778877764     99999996321     246788899999997 99999999999999999999999998874 67


Q ss_pred             CchHHHHHHhcCCcEEecCCCchhhhhHHHHHH--hcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         71 GHTTSMDVLWTGTPVVTLPGETLASRVAASQLA--TLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        71 ~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~--~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      +|++++|||+||+|||+.+......    .++.  ..|..+++.+|.+++.+...++++|+
T Consensus       337 Fgi~~lEAMa~G~pvIa~~~ggp~~----~iv~~~~~g~~G~l~~d~~~la~ai~~ll~~~  393 (419)
T cd03806         337 FGIGVVEYMAAGLIPLAHASGGPLL----DIVVPWDGGPTGFLASTAEEYAEAIEKILSLS  393 (419)
T ss_pred             cccHHHHHHHcCCcEEEEcCCCCch----heeeccCCCCceEEeCCHHHHHHHHHHHHhCC
Confidence            8999999999999999886321111    1111  02556777889999999999999875

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.73  E-value=3.3e-17  Score=129.13  Aligned_cols=123  Identities=19%  Similarity=0.127  Sum_probs=92.0

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc--------cHHHHHHHHHHcCC--CCCCEEEecCCCHHHHHHhhccccEEEcCC-CCC
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV--------GEANIQATAQALGL--DQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCN   70 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~--------~~~~l~~~~~~~g~--~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~~~   70 (130)
                      +++++.++.|+.+|+++|++++        ..+..+++.++++.  ..++|+|+|+++++++..+|+.+|+++.|+ +++
T Consensus       233 a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~  312 (396)
T cd03818         233 ALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFV  312 (396)
T ss_pred             HHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEEEcCcccc
Confidence            5677788899999999996321        11123344455443  238999999999999999999999998766 677


Q ss_pred             CchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         71 GHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        71 ~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      .|++++|||+||+|||+++......     ++. .|.++++.  .|.+++.+...++++|++
T Consensus       313 ~~~~llEAmA~G~PVIas~~~g~~e-----~i~-~~~~G~lv~~~d~~~la~~i~~ll~~~~  368 (396)
T cd03818         313 LSWSLLEAMACGCLVVGSDTAPVRE-----VIT-DGENGLLVDFFDPDALAAAVIELLDDPA  368 (396)
T ss_pred             cchHHHHHHHCCCCEEEcCCCCchh-----hcc-cCCceEEcCCCCHHHHHHHHHHHHhCHH
Confidence            8999999999999999987543322     222 25556654  489999999999998863

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.70  E-value=1.1e-16  Score=122.68  Aligned_cols=119  Identities=20%  Similarity=0.192  Sum_probs=95.9

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      ++.++.++.|+.+++++|+ ++..+.+++.++++++. ++|.|+|+  .+++..+|+.||+++.|+. ++.|++++|||+
T Consensus       213 a~~~l~~~~~~~~l~ivG~-g~~~~~~~~~~~~~~~~-~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma  288 (358)
T cd03812         213 IFAELLKKNPNAKLLLVGD-GELEEEIKKKVKELGLE-DKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQA  288 (358)
T ss_pred             HHHHHHHhCCCeEEEEEeC-CchHHHHHHHHHhcCCC-CcEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHH
Confidence            5677778889999999996 67778899999999997 99999998  4678889999999998875 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCcee-cCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIA-RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va-~~~~~y~~~a~~l~~d~e  130 (130)
                      +|+|||+++......     ++.. +...+.. ++++++.+...++++||+
T Consensus       289 ~G~PvI~s~~~~~~~-----~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~  333 (358)
T cd03812         289 SGLPCILSDTITKEV-----DLTD-LVKFLSLDESPEIWAEEILKLKSEDR  333 (358)
T ss_pred             hCCCEEEEcCCchhh-----hhcc-CccEEeCCCCHHHHHHHHHHHHhCcc
Confidence            999999987543322     2222 3333444 456999999999999985

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.70  E-value=2e-16  Score=123.35  Aligned_cols=121  Identities=17%  Similarity=0.182  Sum_probs=95.8

Q ss_pred             hHHHHHhhC---CCcEEEEeecCccc--------HHHHHHHHHH-cCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-
Q psy15363          2 SDIFVLKAV---PNSILWLLKFPAVG--------EANIQATAQA-LGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-   68 (130)
Q Consensus         2 ~w~~il~~~---P~a~l~i~g~~~~~--------~~~l~~~~~~-~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-   68 (130)
                      ++.++.++.   |+.+|+++|++ +.        .+.+++++++ +|++ ++|.|+|+++.+++..+|+.+|+++.|+. 
T Consensus       232 a~~~l~~~~~~~~~~~l~i~G~~-~~~~~~~~~~~~~l~~~~~~~~~l~-~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~  309 (392)
T cd03805         232 AFAILKDKLAEFKNVRLVIAGGY-DPRVAENVEYLEELQRLAEELLLLE-DQVIFLPSISDSQKELLLSSARALLYTPSN  309 (392)
T ss_pred             HHHHHHhhcccccCeEEEEEcCC-CCCCchhHHHHHHHHHHHHHhcCCC-ceEEEeCCCChHHHHHHHhhCeEEEECCCc
Confidence            566777776   89999999963 32        2678888898 9997 99999999999999999999999987765 


Q ss_pred             CCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCc-eecCHHHHHHHHHHhccCCC
Q psy15363         69 CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPEL-IARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        69 ~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~-va~~~~~y~~~a~~l~~d~e  130 (130)
                      +++|++++|||+||+|||+++.......     +.. |..++ +..|++++.+...++++|++
T Consensus       310 E~~g~~~lEAma~G~PvI~s~~~~~~e~-----i~~-~~~g~~~~~~~~~~a~~i~~l~~~~~  366 (392)
T cd03805         310 EHFGIVPLEAMYAGKPVIACNSGGPLET-----VVD-GETGFLCEPTPEEFAEAMLKLANDPD  366 (392)
T ss_pred             CCCCchHHHHHHcCCCEEEECCCCcHHH-----hcc-CCceEEeCCCHHHHHHHHHHHHhChH
Confidence            5679999999999999999875533332     221 33454 44688999999999888763

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=99.70  E-value=8.9e-17  Score=130.10  Aligned_cols=114  Identities=15%  Similarity=0.022  Sum_probs=91.2

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +++++.+..|+.+|+|+|+ |+.++.|++.++++|++ .++ |.|..+.++   +|+.+|||+.||. +++|++++||||
T Consensus       249 a~~~l~~~~~~~~l~ivGd-Gp~~~~L~~~a~~l~l~-~~v-f~G~~~~~~---~~~~~DvFv~pS~~Et~g~v~lEAmA  322 (462)
T PLN02846        249 LLHKHQKELSGLEVDLYGS-GEDSDEVKAAAEKLELD-VRV-YPGRDHADP---LFHDYKVFLNPSTTDVVCTTTAEALA  322 (462)
T ss_pred             HHHHHHhhCCCeEEEEECC-CccHHHHHHHHHhcCCc-EEE-ECCCCCHHH---HHHhCCEEEECCCcccchHHHHHHHH
Confidence            4667777789999999997 79999999999999986 555 889876654   6778899999885 678999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d  128 (130)
                      ||+|||+.+...      ..++.. |-+.+..+|.++|++...+++++
T Consensus       323 ~G~PVVa~~~~~------~~~v~~-~~ng~~~~~~~~~a~ai~~~l~~  363 (462)
T PLN02846        323 MGKIVVCANHPS------NEFFKQ-FPNCRTYDDGKGFVRATLKALAE  363 (462)
T ss_pred             cCCcEEEecCCC------cceeec-CCceEecCCHHHHHHHHHHHHcc
Confidence            999999986541      123322 55566678999999999888774

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=99.70  E-value=2.1e-16  Score=124.25  Aligned_cols=121  Identities=23%  Similarity=0.210  Sum_probs=95.9

Q ss_pred             hHHHHHhhCCC--cEEEEeecC---c-ccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchH
Q psy15363          2 SDIFVLKAVPN--SILWLLKFP---A-VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTT   74 (130)
Q Consensus         2 ~w~~il~~~P~--a~l~i~g~~---~-~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~   74 (130)
                      ++.+++++.|+  .+|+++|++   + +..+.++++++++++. ++|+|+|.++.+++..+|+.||+++.|+. +++|++
T Consensus       240 a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~-~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~  318 (405)
T TIGR03449       240 AVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIA-DRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLV  318 (405)
T ss_pred             HHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCC-ceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChH
Confidence            46677788887  899999952   2 3456789999999997 89999999999999999999999988764 677999


Q ss_pred             HHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         75 SMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        75 ~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      ++|||+||+|||+.+.....     .++. .|-.+++.  .|.+++.+...++++|+
T Consensus       319 ~lEAma~G~Pvi~~~~~~~~-----e~i~-~~~~g~~~~~~d~~~la~~i~~~l~~~  369 (405)
T TIGR03449       319 AMEAQACGTPVVAARVGGLP-----VAVA-DGETGLLVDGHDPADWADALARLLDDP  369 (405)
T ss_pred             HHHHHHcCCCEEEecCCCcH-----hhhc-cCCceEECCCCCHHHHHHHHHHHHhCH
Confidence            99999999999998654222     2222 24455554  48899999998888775

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.70  E-value=2.5e-16  Score=125.57  Aligned_cols=111  Identities=14%  Similarity=0.108  Sum_probs=90.5

Q ss_pred             CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC----CCCchHHHHHHhcCCcE
Q psy15363         10 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL----CNGHTTSMDVLWTGTPV   85 (130)
Q Consensus        10 ~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~----~~~g~~~lEAla~G~Pv   85 (130)
                      .|+.+|+++|+ |+.++.++++++++|++ +.+.|.|+++.+++..+|+.||+++.+++    ++.+++++|||+||+||
T Consensus       267 ~~~i~l~ivG~-G~~~~~l~~~~~~~~l~-~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PV  344 (415)
T cd03816         267 LPKLLCIITGK-GPLKEKYLERIKELKLK-KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPV  344 (415)
T ss_pred             CCCEEEEEEec-CccHHHHHHHHHHcCCC-cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCE
Confidence            48899999996 68889999999999996 66666789999999999999999984322    34699999999999999


Q ss_pred             EecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccC
Q psy15363         86 VTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        86 V~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d  128 (130)
                      |+++....     ..++. .|..+++..|.+++.+...+|++|
T Consensus       345 I~s~~~~~-----~eiv~-~~~~G~lv~d~~~la~~i~~ll~~  381 (415)
T cd03816         345 CALDFKCI-----DELVK-HGENGLVFGDSEELAEQLIDLLSN  381 (415)
T ss_pred             EEeCCCCH-----HHHhc-CCCCEEEECCHHHHHHHHHHHHhc
Confidence            99865422     23332 366677778999999999999988

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=99.69  E-value=3.4e-16  Score=123.47  Aligned_cols=119  Identities=15%  Similarity=0.114  Sum_probs=91.7

Q ss_pred             hHHHHHhhCCCcEEEEeecCccc---------HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC--CC
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVG---------EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--CN   70 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~---------~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~~   70 (130)
                      +|.++.++.|+.+|+++|++ +.         .+.+++++++++   ++|+|+|+++.+++..+|+.||+++.|+.  ++
T Consensus       214 A~~~l~~~~p~~~lvivG~g-~~~~~~~~~~~~~~l~~~~~~l~---~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~  289 (380)
T PRK15484        214 AFEKLATAHSNLKLVVVGDP-TASSKGEKAAYQKKVLEAAKRIG---DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEA  289 (380)
T ss_pred             HHHHHHHhCCCeEEEEEeCC-ccccccchhHHHHHHHHHHHhcC---CcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccc
Confidence            67888888999999999963 31         234555555554   68999999999999999999999998874  56


Q ss_pred             CchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCc-e--ecCHHHHHHHHHHhccCCC
Q psy15363         71 GHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPEL-I--ARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        71 ~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~-v--a~~~~~y~~~a~~l~~d~e  130 (130)
                      +|++++|||+||+|||+++......     ++. .|..++ +  ..|.+++.+...++++|++
T Consensus       290 f~~~~lEAma~G~PVI~s~~gg~~E-----iv~-~~~~G~~l~~~~d~~~la~~I~~ll~d~~  346 (380)
T PRK15484        290 FCMVAVEAMAAGKPVLASTKGGITE-----FVL-EGITGYHLAEPMTSDSIISDINRTLADPE  346 (380)
T ss_pred             cccHHHHHHHcCCCEEEeCCCCcHh-----hcc-cCCceEEEeCCCCHHHHHHHHHHHHcCHH
Confidence            7999999999999999986543322     222 255565 4  2588999999999998863

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=99.69  E-value=7.7e-16  Score=120.08  Aligned_cols=112  Identities=13%  Similarity=0.066  Sum_probs=91.6

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCC--HHHHHHhhccccEEEcCCC-CCCchHHHHHHhcCCcEEe
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA--KEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTGTPVVT   87 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~--~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G~PvV~   87 (130)
                      ++.+|+++|+ |+.++.+++.++++++. ++|.|+|.++  .+++..+|..+|+++.|+. +++|++++|||+||+|||+
T Consensus       209 ~~~~l~ivG~-g~~~~~l~~~~~~~~l~-~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~  286 (359)
T PRK09922        209 GEWQLHIIGD-GSDFEKCKAYSRELGIE-QRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCIS  286 (359)
T ss_pred             CCeEEEEEeC-CccHHHHHHHHHHcCCC-CeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEE
Confidence            4789999996 67788999999999997 8999999874  4788889999999998876 4679999999999999999


Q ss_pred             cC-CCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         88 LP-GETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        88 ~~-g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ++ .....     .++. .|..+++.  .|.+++++...++++|++
T Consensus       287 s~~~~g~~-----eiv~-~~~~G~lv~~~d~~~la~~i~~l~~~~~  326 (359)
T PRK09922        287 SDCMSGPR-----DIIK-PGLNGELYTPGNIDEFVGKLNKVISGEV  326 (359)
T ss_pred             eCCCCChH-----HHcc-CCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence            87 43222     2332 35666553  689999999999999874

>PLN02949 transferase, transferring glycosyl groups

Probab=99.68  E-value=3.2e-16  Score=127.09  Aligned_cols=122  Identities=16%  Similarity=0.096  Sum_probs=94.8

Q ss_pred             hHHHHHhh----CCCcEEEEeecCcc-----cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC-CCCC
Q psy15363          2 SDIFVLKA----VPNSILWLLKFPAV-----GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNG   71 (130)
Q Consensus         2 ~w~~il~~----~P~a~l~i~g~~~~-----~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~~~~   71 (130)
                      +|+++.++    .|+.+|+|+|++..     ..+.++++++++|++ ++|.|+|.++.+++..+|+.||+++.|+ .+++
T Consensus       289 A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~-~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~F  367 (463)
T PLN02949        289 AFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLD-GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHF  367 (463)
T ss_pred             HHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCC-CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCC
Confidence            56666553    47899999996311     125788999999997 9999999999999999999999999876 5778


Q ss_pred             chHHHHHHhcCCcEEecCCCchhhhhHHHHHHh--cCCCCceecCHHHHHHHHHHhccC
Q psy15363         72 HTTSMDVLWTGTPVVTLPGETLASRVAASQLAT--LGCPELIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        72 g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~--~g~~~~va~~~~~y~~~a~~l~~d  128 (130)
                      |++++|||+||+|||+.+......    .++..  .|..++.++|.++|.+...++++|
T Consensus       368 GivvlEAMA~G~PVIa~~~gGp~~----eIV~~~~~g~tG~l~~~~~~la~ai~~ll~~  422 (463)
T PLN02949        368 GISVVEYMAAGAVPIAHNSAGPKM----DIVLDEDGQQTGFLATTVEEYADAILEVLRM  422 (463)
T ss_pred             ChHHHHHHHcCCcEEEeCCCCCcc----eeeecCCCCcccccCCCHHHHHHHHHHHHhC
Confidence            999999999999999986432110    11111  145677788999999999998874

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.67  E-value=7e-16  Score=116.68  Aligned_cols=121  Identities=20%  Similarity=0.141  Sum_probs=94.9

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      +|.++.++.|+.+++++|.+.. ....++..+++.++. ++|.|+|+++.+++..+|+.||+++.|+. +++|++++|||
T Consensus       224 a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eam  302 (375)
T cd03821         224 AFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLE-DRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEAL  302 (375)
T ss_pred             HHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCcc-ceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHH
Confidence            4667777789999999996432 344556666888997 99999999999999999999999988875 67899999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      +||+|||+.+......     ++.. +..-++..+.+++++...++++|+
T Consensus       303 a~G~PvI~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~i~~l~~~~  346 (375)
T cd03821         303 ACGTPVVTTDKVPWQE-----LIEY-GCGWVVDDDVDALAAALRRALELP  346 (375)
T ss_pred             hcCCCEEEcCCCCHHH-----Hhhc-CceEEeCCChHHHHHHHHHHHhCH
Confidence            9999999987654433     2222 333345566699999999998875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>PLN02275 transferase, transferring glycosyl groups

Probab=99.67  E-value=7.8e-16  Score=120.99  Aligned_cols=109  Identities=17%  Similarity=0.141  Sum_probs=86.6

Q ss_pred             hCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEec-CCCHHHHHHhhccccEEEcCC--C--CCCchHHHHHHhcCC
Q psy15363          9 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSN-VAAKEEHVRRGQLADVCLDTP--L--CNGHTTSMDVLWTGT   83 (130)
Q Consensus         9 ~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g-~~~~~~~~~~~~~~Dv~l~~~--~--~~~g~~~lEAla~G~   83 (130)
                      +.|+.+|+++|+ |+.++.++++++++|++ + ++|.+ +++++++..+|+.||+|+.++  .  ++.|++++|||+||+
T Consensus       258 ~~~~i~l~ivG~-G~~~~~l~~~~~~~~l~-~-v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~  334 (371)
T PLN02275        258 LYPRLLFIITGK-GPQKAMYEEKISRLNLR-H-VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL  334 (371)
T ss_pred             cCCCeEEEEEeC-CCCHHHHHHHHHHcCCC-c-eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC
Confidence            468999999996 68899999999999996 5 77755 699999999999999998542  2  457999999999999


Q ss_pred             cEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhc
Q psy15363         84 PVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLG  126 (130)
Q Consensus        84 PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~  126 (130)
                      |||+......     ..++. .|..+++.++.+++.+...+|+
T Consensus       335 PVVa~~~gg~-----~eiv~-~g~~G~lv~~~~~la~~i~~l~  371 (371)
T PLN02275        335 PVCAVSYSCI-----GELVK-DGKNGLLFSSSSELADQLLELL  371 (371)
T ss_pred             CEEEecCCCh-----HHHcc-CCCCeEEECCHHHHHHHHHHhC
Confidence            9999864322     23333 3667777788888888777663

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=99.67  E-value=4.8e-16  Score=127.07  Aligned_cols=116  Identities=8%  Similarity=-0.032  Sum_probs=91.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|.++.++.|+++|.++|. |+.++.++++++++++. ++|.|.|+.+   +..+|+.+|+|+.|+. +++|++++|||+
T Consensus       340 A~~~l~~~~p~~~l~i~G~-G~~~~~l~~~i~~~~l~-~~V~f~G~~~---~~~~~~~adv~v~pS~~Egfgl~~lEAma  414 (500)
T TIGR02918       340 AVVKAKKSVPELTFDIYGE-GGEKQKLQKIINENQAQ-DYIHLKGHRN---LSEVYKDYELYLSASTSEGFGLTLMEAVG  414 (500)
T ss_pred             HHHHHHhhCCCeEEEEEEC-chhHHHHHHHHHHcCCC-CeEEEcCCCC---HHHHHHhCCEEEEcCccccccHHHHHHHH
Confidence            6788888999999999996 67778999999999997 9999999874   4567889999998874 678999999999


Q ss_pred             cCCcEEecCCC-chhhhhHHHHHHhcCCCCceec------C----HHHHHHHHHHhccC
Q psy15363         81 TGTPVVTLPGE-TLASRVAASQLATLGCPELIAR------T----HKEYQDIAIRLGTD  128 (130)
Q Consensus        81 ~G~PvV~~~g~-~~~~r~~~~~l~~~g~~~~va~------~----~~~y~~~a~~l~~d  128 (130)
                      ||+|||+++-. ..     ..++ ..|.++++.+      |    .+++++...+|+++
T Consensus       415 ~G~PVI~~dv~~G~-----~eiI-~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~  467 (500)
T TIGR02918       415 SGLGMIGFDVNYGN-----PTFI-EDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFNS  467 (500)
T ss_pred             hCCCEEEecCCCCC-----HHHc-cCCCCEEEEeCCccccchhHHHHHHHHHHHHHhCh
Confidence            99999998632 11     1222 2377776654      2    67788888777743

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.67  E-value=7.4e-16  Score=116.73  Aligned_cols=121  Identities=21%  Similarity=0.262  Sum_probs=96.2

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|.++.++.|+.+++++|. ++..+.+++.++++++. ++|.|.|.++.+++..+|+.||+++.|+. +++|++++|||+
T Consensus       223 ~~~~~~~~~~~~~l~i~G~-~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~  300 (374)
T cd03817         223 AFARLLKEEPDVKLVIVGD-GPEREELEELARELGLA-DRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMA  300 (374)
T ss_pred             HHHHHHHhCCCeEEEEEeC-CchHHHHHHHHHHcCCC-CcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHH
Confidence            4667777779999999996 57778889999999987 99999999999999999999999998875 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceecC-HHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIART-HKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~-~~~y~~~a~~l~~d~e  130 (130)
                      ||+|||+.+.......+     . .|-.+++.++ .+++++...++.+|++
T Consensus       301 ~g~PvI~~~~~~~~~~i-----~-~~~~g~~~~~~~~~~~~~i~~l~~~~~  345 (374)
T cd03817         301 AGLPVVAVDAPGLPDLV-----A-DGENGFLFPPGDEALAEALLRLLQDPE  345 (374)
T ss_pred             cCCcEEEeCCCChhhhe-----e-cCceeEEeCCCCHHHHHHHHHHHhChH
Confidence            99999998765433222     1 2344555433 3388888888888764

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=99.67  E-value=1e-15  Score=119.51  Aligned_cols=121  Identities=21%  Similarity=0.161  Sum_probs=91.6

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc----cHHHHHHHHHHcCCCCCCEEEecCC--CHHHHHHhhccccEEEcCCC-CCCchH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV----GEANIQATAQALGLDQHRILFSNVA--AKEEHVRRGQLADVCLDTPL-CNGHTT   74 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~----~~~~l~~~~~~~g~~~~rv~f~g~~--~~~~~~~~~~~~Dv~l~~~~-~~~g~~   74 (130)
                      +|+++.++.|+.+|+++|++..    ..+.++++.++.++. ++|.|+|..  +.+++..+|+.+|+|+.|+. +++|++
T Consensus       211 a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~  289 (372)
T cd03792         211 AYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGD-PDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLT  289 (372)
T ss_pred             HHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHH
Confidence            4667777779999999996422    122345555567886 899999987  78889999999999998875 567999


Q ss_pred             HHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         75 SMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        75 ~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      ++|||+||+|||+.+......     ++ ..|..+++.++.++......++++|+
T Consensus       290 ~lEA~a~G~Pvv~s~~~~~~~-----~i-~~~~~g~~~~~~~~~a~~i~~ll~~~  338 (372)
T cd03792         290 VTEALWKGKPVIAGPVGGIPL-----QI-EDGETGFLVDTVEEAAVRILYLLRDP  338 (372)
T ss_pred             HHHHHHcCCCEEEcCCCCchh-----hc-ccCCceEEeCCcHHHHHHHHHHHcCH
Confidence            999999999999986543322     22 23666777788888888777887775

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=99.66  E-value=6.9e-16  Score=124.48  Aligned_cols=117  Identities=12%  Similarity=0.100  Sum_probs=92.9

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~   81 (130)
                      +.+++++.|+.+|+|+|+ |+.++.+++++++     .+|+|+|+++.+++..+|+.+|+|+.|+. +++|++++|||+|
T Consensus       281 li~a~~~~~~~~l~ivG~-G~~~~~l~~~~~~-----~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~  354 (465)
T PLN02871        281 LKRVMERLPGARLAFVGD-GPYREELEKMFAG-----TPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMAS  354 (465)
T ss_pred             HHHHHHhCCCcEEEEEeC-ChHHHHHHHHhcc-----CCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHc
Confidence            456778889999999996 6777778777653     57999999999999999999999998875 5679999999999


Q ss_pred             CCcEEecCCCchhhhhHHHHHHh--cCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         82 GTPVVTLPGETLASRVAASQLAT--LGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        82 G~PvV~~~g~~~~~r~~~~~l~~--~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      |+|||+.+....     ..++..  .|-.+++.  .|.+++.+...+|++|++
T Consensus       355 G~PVI~s~~gg~-----~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~  402 (465)
T PLN02871        355 GVPVVAARAGGI-----PDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPE  402 (465)
T ss_pred             CCCEEEcCCCCc-----HhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHH
Confidence            999999865422     223332  25556654  489999999999988763

>PLN02501 digalactosyldiacylglycerol synthase

Probab=99.66  E-value=7.4e-16  Score=128.91  Aligned_cols=115  Identities=12%  Similarity=-0.033  Sum_probs=91.7

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|+++.++.|+.+|+|+|+ |+.++.++++++++|+   +|.|+|..+.  ...+|+.+|||+.|+. +++|++++||||
T Consensus       567 Ala~L~~~~pnvrLvIVGD-GP~reeLe~la~eLgL---~V~FLG~~dd--~~~lyasaDVFVlPS~sEgFGlVlLEAMA  640 (794)
T PLN02501        567 LLAKHKNELDGFNLDVFGN-GEDAHEVQRAAKRLDL---NLNFLKGRDH--ADDSLHGYKVFINPSISDVLCTATAEALA  640 (794)
T ss_pred             HHHHHHhhCCCeEEEEEcC-CccHHHHHHHHHHcCC---EEEecCCCCC--HHHHHHhCCEEEECCCcccchHHHHHHHH
Confidence            4667777889999999996 6888999999999887   3899998753  3367899999998875 678999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+.+....      .++. .|.+.++..|.++|++.+.+++.|+
T Consensus       641 ~GlPVVATd~pG~------e~V~-~g~nGll~~D~EafAeAI~~LLsd~  682 (794)
T PLN02501        641 MGKFVVCADHPSN------EFFR-SFPNCLTYKTSEDFVAKVKEALANE  682 (794)
T ss_pred             cCCCEEEecCCCC------ceEe-ecCCeEecCCHHHHHHHHHHHHhCc
Confidence            9999999865421      1111 1445566789999999999998876

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=99.65  E-value=8e-16  Score=119.69  Aligned_cols=118  Identities=13%  Similarity=0.123  Sum_probs=92.7

Q ss_pred             hHHHHHhhCC----CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHH
Q psy15363          2 SDIFVLKAVP----NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSM   76 (130)
Q Consensus         2 ~w~~il~~~P----~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~l   76 (130)
                      +|.+++++.|    +.+|+++|. |+.++.+++.++++|+. +++.|.|..  +++..+|+.+|+++.|+. +++|++++
T Consensus       215 a~~~l~~~~~~~~~~~~l~i~G~-g~~~~~~~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~adi~v~pS~~Eg~~~~~l  290 (374)
T TIGR03088       215 AFALLVRQLPEGAERLRLVIVGD-GPARGACEQMVRAAGLA-HLVWLPGER--DDVPALMQALDLFVLPSLAEGISNTIL  290 (374)
T ss_pred             HHHHHHHhCcccccceEEEEecC-CchHHHHHHHHHHcCCc-ceEEEcCCc--CCHHHHHHhcCEEEeccccccCchHHH
Confidence            4666777665    689999996 67778899999999997 899999964  678899999999998775 57799999


Q ss_pred             HHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         77 DVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        77 EAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      |||+||+|||+++......     ++. .|..+++.  .|.+++++...++.+|+
T Consensus       291 EAma~G~Pvv~s~~~g~~e-----~i~-~~~~g~~~~~~d~~~la~~i~~l~~~~  339 (374)
T TIGR03088       291 EAMASGLPVIATAVGGNPE-----LVQ-HGVTGALVPPGDAVALARALQPYVSDP  339 (374)
T ss_pred             HHHHcCCCEEEcCCCCcHH-----Hhc-CCCceEEeCCCCHHHHHHHHHHHHhCH
Confidence            9999999999986442222     222 24455544  57899999999988775

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>KOG1111|consensus

Probab=99.65  E-value=4.1e-16  Score=121.34  Aligned_cols=86  Identities=14%  Similarity=0.089  Sum_probs=79.7

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC-CCCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~~~~g~~~lEAla   80 (130)
                      +-+++.++.|+++++++|+ ||.+..+++..+++-+. +||.|+|.+++++..+.|..-||||.|+ .+.+|++++||++
T Consensus       216 iIp~vc~~~p~vrfii~GD-GPk~i~lee~lEk~~l~-~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaS  293 (426)
T KOG1111|consen  216 IIPSVCDKHPEVRFIIIGD-GPKRIDLEEMLEKLFLQ-DRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAAS  293 (426)
T ss_pred             HHHHHHhcCCCeeEEEecC-CcccchHHHHHHHhhcc-CceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHh
Confidence            4578999999999999997 68888899999999997 9999999999999999999999999998 5789999999999


Q ss_pred             cCCcEEecC
Q psy15363         81 TGTPVVTLP   89 (130)
Q Consensus        81 ~G~PvV~~~   89 (130)
                      ||+|||++.
T Consensus       294 cGL~VVsTr  302 (426)
T KOG1111|consen  294 CGLPVVSTR  302 (426)
T ss_pred             CCCEEEEee
Confidence            999999875

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=99.65  E-value=1.2e-15  Score=125.34  Aligned_cols=102  Identities=21%  Similarity=0.172  Sum_probs=82.6

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla   80 (130)
                      ++++++++.|+.+|+++|+ |+.++.++++++++|+. ++|+|+|+.  ++...+|+.+|+|+.|+.+ ++|++++|||+
T Consensus       419 A~a~llk~~pdirLvIVGd-G~~~eeLk~la~elgL~-d~V~FlG~~--~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA  494 (578)
T PRK15490        419 FAARYLQHHPATRFVLVGD-GDLRAEAQKRAEQLGIL-ERILFVGAS--RDVGYWLQKMNVFILFSRYEGLPNVLIEAQM  494 (578)
T ss_pred             HHHHHHhHCCCeEEEEEeC-chhHHHHHHHHHHcCCC-CcEEECCCh--hhHHHHHHhCCEEEEcccccCccHHHHHHHH
Confidence            4677888899999999996 67888999999999997 999999985  6788899999999988754 57999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceec
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIAR  113 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~  113 (130)
                      ||+|||+++......     ++. .|.++++.+
T Consensus       495 ~GlPVVATdvGG~~E-----iV~-dG~nG~LVp  521 (578)
T PRK15490        495 VGVPVISTPAGGSAE-----CFI-EGVSGFILD  521 (578)
T ss_pred             hCCCEEEeCCCCcHH-----Hcc-cCCcEEEEC
Confidence            999999986542222     221 366666643

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=99.65  E-value=1.2e-15  Score=118.45  Aligned_cols=119  Identities=18%  Similarity=0.188  Sum_probs=95.6

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      ++.++.++.|+++|.++|. ++....+++..+++++. ++|.|.|..  +++..+|+.||+++.|+. +++|++++|||+
T Consensus       225 a~~~l~~~~~~~~l~i~G~-g~~~~~~~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma  300 (372)
T cd04949         225 AFAKVVKQVPDATLDIYGY-GDEEEKLKELIEELGLE-DYVFLKGYT--RDLDEVYQKAQLSLLTSQSEGFGLSLMEALS  300 (372)
T ss_pred             HHHHHHHhCCCcEEEEEEe-CchHHHHHHHHHHcCCc-ceEEEcCCC--CCHHHHHhhhhEEEecccccccChHHHHHHh
Confidence            5778888899999999996 56677788888999997 999999954  568889999999999986 467999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+.+....    ...++ ..|.++++.+  |.+++++...++++|+
T Consensus       301 ~G~PvI~~~~~~g----~~~~v-~~~~~G~lv~~~d~~~la~~i~~ll~~~  346 (372)
T cd04949         301 HGLPVISYDVNYG----PSEII-EDGENGYLVPKGDIEALAEAIIELLNDP  346 (372)
T ss_pred             CCCCEEEecCCCC----cHHHc-ccCCCceEeCCCcHHHHHHHHHHHHcCH
Confidence            9999999863211    11222 2366677766  8999999999999886

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=99.64  E-value=2.9e-15  Score=114.25  Aligned_cols=121  Identities=17%  Similarity=0.136  Sum_probs=96.4

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-------CCCchH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-------CNGHTT   74 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-------~~~g~~   74 (130)
                      ++.++.++.|+.++.++|. ++..+.+++.+++.++. ++|+|.|.++.+++..+|+.+|+++.|+.       +++|++
T Consensus       200 ~~~~l~~~~~~~~l~i~G~-~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~  277 (355)
T cd03799         200 ALALLKDRGIDFRLDIVGD-GPLRDELEALIAELGLE-DRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVV  277 (355)
T ss_pred             HHHHHhhcCCCeEEEEEEC-CccHHHHHHHHHHcCCC-CeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHH
Confidence            3455556668999999996 57778899999999986 89999999999999999999999998874       567999


Q ss_pred             HHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         75 SMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        75 ~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ++|||+||+|||+.+......     ++. .+..+++.  .|.+++++...++++|++
T Consensus       278 ~~Ea~a~G~Pvi~~~~~~~~~-----~i~-~~~~g~~~~~~~~~~l~~~i~~~~~~~~  329 (355)
T cd03799         278 LMEAMAMGLPVISTDVSGIPE-----LVE-DGETGLLVPPGDPEALADAIERLLDDPE  329 (355)
T ss_pred             HHHHHHcCCCEEecCCCCcch-----hhh-CCCceEEeCCCCHHHHHHHHHHHHhCHH
Confidence            999999999999986543322     222 23345544  378999999999888763

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=99.64  E-value=1.5e-15  Score=128.08  Aligned_cols=116  Identities=16%  Similarity=0.137  Sum_probs=89.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      ++++++++.|+.+|+|+|+ |+.++.++++++++|+. ++|+|+|+.+  +...+|+.+|+|+.|+. +++|++++|||+
T Consensus       538 A~a~l~~~~p~~~LvIvG~-G~~~~~L~~l~~~lgL~-~~V~flG~~~--dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA  613 (694)
T PRK15179        538 AAQRFAASHPKVRFIMVGG-GPLLESVREFAQRLGMG-ERILFTGLSR--RVGYWLTQFNAFLLLSRFEGLPNVLIEAQF  613 (694)
T ss_pred             HHHHHHHHCcCeEEEEEcc-CcchHHHHHHHHHcCCC-CcEEEcCCcc--hHHHHHHhcCEEEeccccccchHHHHHHHH
Confidence            5677888899999999996 67888999999999998 9999999974  67889999999998875 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--C--HHHHHHHHHHhcc
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIAR--T--HKEYQDIAIRLGT  127 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~--~~~y~~~a~~l~~  127 (130)
                      ||+|||+++.....     .++. .|.++++.+  |  .+++.+...++++
T Consensus       614 ~G~PVVat~~gG~~-----EiV~-dg~~GlLv~~~d~~~~~La~aL~~ll~  658 (694)
T PRK15179        614 SGVPVVTTLAGGAG-----EAVQ-EGVTGLTLPADTVTAPDVAEALARIHD  658 (694)
T ss_pred             cCCeEEEECCCChH-----HHcc-CCCCEEEeCCCCCChHHHHHHHHHHHh
Confidence            99999998644222     2222 366676653  3  2355555544443

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.62  E-value=9.2e-15  Score=111.58  Aligned_cols=120  Identities=23%  Similarity=0.197  Sum_probs=95.0

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC---CCCchHHHHHHh
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL---CNGHTTSMDVLW   80 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~---~~~g~~~lEAla   80 (130)
                      .+++++.++.+++++|. ++..+.+++.+++.+.. ++|.|+|+++.+++..+|+.||+++.|+.   +++|++++|||+
T Consensus       210 i~a~~~l~~~~l~i~G~-g~~~~~~~~~~~~~~~~-~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~  287 (357)
T cd03795         210 LEAAAALPDAPLVIVGE-GPLEAELEALAAALGLL-DRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMA  287 (357)
T ss_pred             HHHHHhccCcEEEEEeC-ChhHHHHHHHHHhcCCc-ceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHH
Confidence            34555666899999996 57777888888888987 89999999999999999999999998863   567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ||+|||+.+......     .+...|-.+++.  .|.+++++...++++|++
T Consensus       288 ~g~Pvi~~~~~~~~~-----~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~  334 (357)
T cd03795         288 FGKPVISTEIGTGGS-----YVNLHGVTGLVVPPGDPAALAEAIRRLLEDPE  334 (357)
T ss_pred             cCCCEEecCCCCchh-----HHhhCCCceEEeCCCCHHHHHHHHHHHHHCHH
Confidence            999999986543322     222224455554  579999999999988863

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.62  E-value=4.4e-15  Score=111.08  Aligned_cols=120  Identities=17%  Similarity=0.181  Sum_probs=94.1

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|.++.+..|+.+|+++|. ++.++.+++.+++.++. ++|.|.|.  .+++..+|+.||+++.|+. +++|++++|||+
T Consensus       199 ~~~~l~~~~~~~~l~i~G~-~~~~~~~~~~~~~~~~~-~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a  274 (348)
T cd03820         199 AWAKIAKKHPDWKLRIVGD-GPEREALEALIKELGLE-DRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMA  274 (348)
T ss_pred             HHHHHHhcCCCeEEEEEeC-CCCHHHHHHHHHHcCCC-CeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHH
Confidence            5667777789999999996 57778888889999997 89999998  5789999999999998875 467999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ||+|||+.+......     .+...+..+++.  .|.+++++...++++|++
T Consensus       275 ~G~Pvi~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~  321 (348)
T cd03820         275 FGLPVISFDCPTGPS-----EIIEDGVNGLLVPNGDVEALAEALLRLMEDEE  321 (348)
T ss_pred             cCCCEEEecCCCchH-----hhhccCcceEEeCCCCHHHHHHHHHHHHcCHH
Confidence            999999986432111     111223345554  366999999999988874

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.62  E-value=6.3e-15  Score=114.34  Aligned_cols=121  Identities=21%  Similarity=0.201  Sum_probs=94.2

Q ss_pred             hHHHHHhhCCCcEEEEeecCccc-----HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVG-----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTS   75 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~-----~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~   75 (130)
                      ++.++.++.|+.+|+++|++...     .+.+++..+++++. +++.|+|.++.+++..+|+.+|+++.|+. ++.|+++
T Consensus       241 a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l  319 (398)
T cd03800         241 AYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVI-DRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTA  319 (398)
T ss_pred             HHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCC-ceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHH
Confidence            45666677889999999963221     24567788889987 89999999999999999999999998874 5679999


Q ss_pred             HHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         76 MDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        76 lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +|||+||+|||+.+......     ++.. +-.+++.  .|.+++++...++++|+
T Consensus       320 ~Ea~a~G~Pvi~s~~~~~~e-----~i~~-~~~g~~~~~~~~~~l~~~i~~l~~~~  369 (398)
T cd03800         320 LEAMACGLPVVATAVGGPRD-----IVVD-GVTGLLVDPRDPEALAAALRRLLTDP  369 (398)
T ss_pred             HHHHhcCCCEEECCCCCHHH-----HccC-CCCeEEeCCCCHHHHHHHHHHHHhCH
Confidence            99999999999987543322     2322 3345555  47899999999998875

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.62  E-value=5.2e-15  Score=117.73  Aligned_cols=121  Identities=14%  Similarity=0.064  Sum_probs=93.3

Q ss_pred             hHHHHHhhCCC--cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhcc--ccEEEcCCC-CCCchHHH
Q psy15363          2 SDIFVLKAVPN--SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL--ADVCLDTPL-CNGHTTSM   76 (130)
Q Consensus         2 ~w~~il~~~P~--a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~--~Dv~l~~~~-~~~g~~~l   76 (130)
                      ++.++.++.|+  .+++++|+ |+..+.+++++++++.. ++|.|+|+++.+++..+|+.  +|+|+.|+. ++.|++++
T Consensus       251 a~~~l~~~~p~~~l~~~iiG~-g~~~~~l~~~~~~~~~~-~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~ll  328 (407)
T cd04946         251 ALAALAKARPSIKIKWTHIGG-GPLEDTLKELAESKPEN-ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIM  328 (407)
T ss_pred             HHHHHHHhCCCceEEEEEEeC-chHHHHHHHHHHhcCCC-ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHH
Confidence            46677777774  55677885 67778899999888886 89999999999999999975  789987775 56799999


Q ss_pred             HHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee---cCHHHHHHHHHHhccCCC
Q psy15363         77 DVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        77 EAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va---~~~~~y~~~a~~l~~d~e  130 (130)
                      |||+||+|||+++.....     .++. .|.++++.   +|.+++++...++++|++
T Consensus       329 EAma~G~PVIas~vgg~~-----e~i~-~~~~G~l~~~~~~~~~la~~I~~ll~~~~  379 (407)
T cd04946         329 EAMSFGIPVIATNVGGTP-----EIVD-NGGNGLLLSKDPTPNELVSSLSKFIDNEE  379 (407)
T ss_pred             HHHHcCCCEEeCCCCCcH-----HHhc-CCCcEEEeCCCCCHHHHHHHHHHHHhCHH
Confidence            999999999998644322     2332 24345443   368999999999988763

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=99.62  E-value=2.1e-15  Score=119.00  Aligned_cols=114  Identities=14%  Similarity=0.094  Sum_probs=84.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC--CCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--CNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~~~g~~~lEAl   79 (130)
                      +|+++.++.|+.+|+|+|+ ++. +.    +++++.. ++|+|+|+++  ++..+|+.+|+++.|+.  ++.+++++|||
T Consensus       249 ~~~~l~~~~p~~~l~ivG~-g~~-~~----~~~l~~~-~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm  319 (397)
T TIGR03087       249 VFPAVRARRPAAEFYIVGA-KPS-PA----VRALAAL-PGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM  319 (397)
T ss_pred             HHHHHHHHCCCcEEEEECC-CCh-HH----HHHhccC-CCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence            4677788899999999996 443 23    3344544 7899999997  57789999999998875  45688999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      +||+|||+++...      ..+....|..-+++.|.+++++...+|++|++
T Consensus       320 a~G~PVV~t~~~~------~~i~~~~~~g~lv~~~~~~la~ai~~ll~~~~  364 (397)
T TIGR03087       320 AMAKPVVASPEAA------EGIDALPGAELLVAADPADFAAAILALLANPA  364 (397)
T ss_pred             HcCCCEEecCccc------ccccccCCcceEeCCCHHHHHHHHHHHHcCHH
Confidence            9999999986320      11111123333566899999999999998863

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.62  E-value=6e-15  Score=113.82  Aligned_cols=117  Identities=18%  Similarity=0.157  Sum_probs=91.1

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|.++.++ ++.+++++|. ++..+.+++.+++.+++ ++|.|.|..  +++..+|+.+|+++.|+. +++|++++|||+
T Consensus       218 a~~~l~~~-~~~~l~i~G~-g~~~~~~~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma  292 (371)
T cd04962         218 IFAKVRKE-VPARLLLVGD-GPERSPAERLARELGLQ-DDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMA  292 (371)
T ss_pred             HHHHHHhc-CCceEEEEcC-CcCHHHHHHHHHHcCCC-ceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHH
Confidence            35555444 5689999996 67788899999999997 899999977  468889999999998885 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+++......     ++. .|..+++.+  |.+++++...++++|+
T Consensus       293 ~g~PvI~s~~~~~~e-----~i~-~~~~G~~~~~~~~~~l~~~i~~l~~~~  337 (371)
T cd04962         293 CGVPVVASNAGGIPE-----VVK-HGETGFLVDVGDVEAMAEYALSLLEDD  337 (371)
T ss_pred             cCCCEEEeCCCCchh-----hhc-CCCceEEcCCCCHHHHHHHHHHHHhCH
Confidence            999999986543322     221 244565553  7889999999988875

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.62  E-value=5.4e-15  Score=114.17  Aligned_cols=111  Identities=13%  Similarity=0.074  Sum_probs=85.9

Q ss_pred             HHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCc
Q psy15363          5 FVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTP   84 (130)
Q Consensus         5 ~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~P   84 (130)
                      +.+++.| .+|+++|+ ++..+.+++     +.. ++|+|+|+++.+++..+|+.||+++.|+.+++|++++|||+||+|
T Consensus       215 ~a~~~~~-~~l~ivG~-g~~~~~l~~-----~~~-~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G~P  286 (351)
T cd03804         215 EAFNKLG-KRLVVIGD-GPELDRLRA-----KAG-PNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTP  286 (351)
T ss_pred             HHHHHCC-CcEEEEEC-ChhHHHHHh-----hcC-CCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcCCC
Confidence            4556677 89999996 565555554     444 899999999999999999999999988777789999999999999


Q ss_pred             EEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         85 VVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        85 vV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      ||+.+......-     +. .|..+++.  .|.+++++...++++|+
T Consensus       287 vi~~~~~~~~e~-----i~-~~~~G~~~~~~~~~~la~~i~~l~~~~  327 (351)
T cd03804         287 VIAYGKGGALET-----VI-DGVTGILFEEQTVESLAAAVERFEKNE  327 (351)
T ss_pred             EEEeCCCCCcce-----ee-CCCCEEEeCCCCHHHHHHHHHHHHhCc
Confidence            999865432221     11 13345443  57889999999999887

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.62  E-value=2.4e-15  Score=121.83  Aligned_cols=120  Identities=17%  Similarity=0.217  Sum_probs=93.1

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc---cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV---GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMD   77 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~---~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lE   77 (130)
                      ++.++.++.|+.+++++|.+..   ..+.++++++++|+. ++|+|+|   .+++..+|+.+|+++.|+. +++|++++|
T Consensus       314 a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~-~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlE  389 (475)
T cd03813         314 AAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLE-DNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILE  389 (475)
T ss_pred             HHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCC-CeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHH
Confidence            5667778899999999996321   246788899999997 9999999   4567788999999988774 678999999


Q ss_pred             HHhcCCcEEecCCCchhhhhHHHHHHh-----cCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         78 VLWTGTPVVTLPGETLASRVAASQLAT-----LGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        78 Ala~G~PvV~~~g~~~~~r~~~~~l~~-----~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ||+||+|||+++......     ++..     .|..+++.  .|.+++.+...++++|++
T Consensus       390 Ama~G~PVVatd~g~~~e-----lv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~  444 (475)
T cd03813         390 AMAAGIPVVATDVGSCRE-----LIEGADDEALGPAGEVVPPADPEALARAILRLLKDPE  444 (475)
T ss_pred             HHHcCCCEEECCCCChHH-----HhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHH
Confidence            999999999986543322     3333     24455544  589999999999998863

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=99.61  E-value=7.7e-15  Score=109.87  Aligned_cols=121  Identities=21%  Similarity=0.208  Sum_probs=96.5

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla   80 (130)
                      +|..+.++.|+.+|+++|. +...+.+++.+++.+.. ++|.|.|.++.+++..+|+.||+++.|+.. ++|++++|||+
T Consensus       220 ~~~~~~~~~~~~~l~i~G~-~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~  297 (374)
T cd03801         220 ALAKLRKEYPDVRLVIVGD-GPLREELEALAAELGLG-DRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMA  297 (374)
T ss_pred             HHHHHhhhcCCeEEEEEeC-cHHHHHHHHHHHHhCCC-cceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHH
Confidence            4566777778999999995 57777888888888887 999999999999999999999999988764 67999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~d~e  130 (130)
                      +|+|||+.+.......+     .. +-.+++.+  |.+++.+...++++|++
T Consensus       298 ~g~pvI~~~~~~~~~~~-----~~-~~~g~~~~~~~~~~l~~~i~~~~~~~~  343 (374)
T cd03801         298 AGLPVVASDVGGIPEVV-----ED-GETGLLVPPGDPEALAEAILRLLDDPE  343 (374)
T ss_pred             cCCcEEEeCCCChhHHh-----cC-CcceEEeCCCCHHHHHHHHHHHHcChH
Confidence            99999998865443322     21 33444443  46899999999888763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.60  E-value=3.6e-15  Score=104.56  Aligned_cols=119  Identities=14%  Similarity=0.103  Sum_probs=92.4

Q ss_pred             HHHHHhh-CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          3 DIFVLKA-VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         3 w~~il~~-~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +.++.++ .|+.+++++|. +.....++..++..++. ++++|.|.++.+++..+|+.+|+++.|+. +++|.+++|||+
T Consensus        37 ~~~l~~~~~~~~~l~i~G~-~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~  114 (172)
T PF00534_consen   37 FKKLKEKKNPNYKLVIVGD-GEYKKELKNLIEKLNLK-ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMA  114 (172)
T ss_dssp             HHHHHHHHHTTEEEEEESH-CCHHHHHHHHHHHTTCG-TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHH
T ss_pred             HHHHHhhcCCCeEEEEEcc-ccccccccccccccccc-ccccccccccccccccccccceeccccccccccccccccccc
Confidence            4445554 89999999995 46677889999999997 99999999999999999999999998875 578999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+........-     +. .+.++++.  .+.+++++...++++|+
T Consensus       115 ~g~pvI~~~~~~~~e~-----~~-~~~~g~~~~~~~~~~l~~~i~~~l~~~  159 (172)
T PF00534_consen  115 CGCPVIASDIGGNNEI-----IN-DGVNGFLFDPNDIEELADAIEKLLNDP  159 (172)
T ss_dssp             TT-EEEEESSTHHHHH-----SG-TTTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred             cccceeeccccCCcee-----ec-cccceEEeCCCCHHHHHHHHHHHHCCH
Confidence            9999999885533322     22 24456555  36699999999988765

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.60  E-value=1.3e-14  Score=110.40  Aligned_cols=120  Identities=21%  Similarity=0.191  Sum_probs=90.7

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHH----HHHHHcCCCCCCEEEecC-CCHHHHHHhhccccEEEcCCC-C--CCch
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQ----ATAQALGLDQHRILFSNV-AAKEEHVRRGQLADVCLDTPL-C--NGHT   73 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~----~~~~~~g~~~~rv~f~g~-~~~~~~~~~~~~~Dv~l~~~~-~--~~g~   73 (130)
                      +|.++.++.|+.+|+++|.+.......+    ++++++|+. ++|.|.|. ++.+++..+|+.+|+++.|+. +  +.|.
T Consensus       206 a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~-~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~  284 (366)
T cd03822         206 ALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLA-DRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSG  284 (366)
T ss_pred             HHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCC-CcEEEecCcCCHHHHHHHHhhcCEEEecccccccccch
Confidence            4677777889999999996433222222    237888997 99999988 999999999999999998875 4  5689


Q ss_pred             HHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         74 TSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        74 ~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +++|||+||+|||+.+... ..     .+.. +-.+++.  .|.+++++...++.+|+
T Consensus       285 ~~~Ea~a~G~PvI~~~~~~-~~-----~i~~-~~~g~~~~~~d~~~~~~~l~~l~~~~  335 (366)
T cd03822         285 VLAYAIGFGKPVISTPVGH-AE-----EVLD-GGTGLLVPPGDPAALAEAIRRLLADP  335 (366)
T ss_pred             HHHHHHHcCCCEEecCCCC-hh-----eeee-CCCcEEEcCCCHHHHHHHHHHHHcCh
Confidence            9999999999999986542 11     1111 3344544  46899999999998875

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>PRK10307 putative glycosyl transferase; Provisional

Probab=99.60  E-value=1.1e-14  Score=115.34  Aligned_cols=113  Identities=16%  Similarity=0.149  Sum_probs=88.5

Q ss_pred             hhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCC-----CchHHHHHHhcC
Q psy15363          8 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCN-----GHTTSMDVLWTG   82 (130)
Q Consensus         8 ~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~-----~g~~~lEAla~G   82 (130)
                      ++.|+.+|+++|+ |+.++.++++++++|++  +|+|+|+++.+++..+|+.||+++.|+..+     .++.++|||+||
T Consensus       255 ~~~~~~~l~ivG~-g~~~~~l~~~~~~~~l~--~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G  331 (412)
T PRK10307        255 RDRPDLIFVICGQ-GGGKARLEKMAQCRGLP--NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG  331 (412)
T ss_pred             ccCCCeEEEEECC-ChhHHHHHHHHHHcCCC--ceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC
Confidence            4568999999996 67888899999999984  799999999999999999999998777533     356789999999


Q ss_pred             CcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         83 TPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        83 ~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +|||+++....   ....++.  + .+++.  .|.+++.+...+|++|+
T Consensus       332 ~PVi~s~~~g~---~~~~~i~--~-~G~~~~~~d~~~la~~i~~l~~~~  374 (412)
T PRK10307        332 RNVVATAEPGT---ELGQLVE--G-IGVCVEPESVEALVAAIAALARQA  374 (412)
T ss_pred             CCEEEEeCCCc---hHHHHHh--C-CcEEeCCCCHHHHHHHHHHHHhCH
Confidence            99999853211   0112333  3 45443  58899999999998876

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.58  E-value=3.5e-14  Score=107.86  Aligned_cols=110  Identities=14%  Similarity=0.013  Sum_probs=85.4

Q ss_pred             CCCcEEEEeecCcccHHHHHHHHHHcC-CCCCCEEEecCCCHHHHHHhhccccEEEcCCC--CCCchHHHHHHhcCCcEE
Q psy15363         10 VPNSILWLLKFPAVGEANIQATAQALG-LDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--CNGHTTSMDVLWTGTPVV   86 (130)
Q Consensus        10 ~P~a~l~i~g~~~~~~~~l~~~~~~~g-~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~~~g~~~lEAla~G~PvV   86 (130)
                      .++.+|+++|. ++..+.+....++.. +. ++|.|+|+++.+++..+|+.+|+++.|+.  +++|++++|||+||+|||
T Consensus       195 ~~~~~l~i~G~-~~~~~~~~~~~~~~~~~~-~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI  272 (335)
T cd03802         195 RAGIPLKLAGP-VSDPDYFYREIAPELLDG-PDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVI  272 (335)
T ss_pred             hcCCeEEEEeC-CCCHHHHHHHHHHhcccC-CcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEE
Confidence            46799999996 566666666655554 54 89999999999999999999999998874  678999999999999999


Q ss_pred             ecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhcc
Q psy15363         87 TLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        87 ~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~  127 (130)
                      +.+......-+      ..|.++++.++.+++++...++.+
T Consensus       273 ~~~~~~~~e~i------~~~~~g~l~~~~~~l~~~l~~l~~  307 (335)
T cd03802         273 AFRRGAVPEVV------EDGVTGFLVDSVEELAAAVARADR  307 (335)
T ss_pred             EeCCCCchhhe------eCCCcEEEeCCHHHHHHHHHHHhc
Confidence            98755333322      235567777778888888777654

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.57  E-value=4.9e-14  Score=106.04  Aligned_cols=121  Identities=21%  Similarity=0.200  Sum_probs=96.4

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|.++.++.|+.+++++|. ++..+.+++.+++.+.. ++|.+.|+++.+++..+|+.||+++.|+. +++|++++|||+
T Consensus       223 ~~~~~~~~~~~~~l~i~g~-~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~  300 (377)
T cd03798         223 ALARLLKKRPDVHLVIVGD-GPLREALEALAAELGLE-DRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMA  300 (377)
T ss_pred             HHHHHHhcCCCeEEEEEcC-CcchHHHHHHHHhcCCc-ceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHh
Confidence            4566666778999999996 56677888888888987 89999999999999999999999998875 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      +|+|||+.+......     ++.. +..+++.  .|.+++++...++.+|++
T Consensus       301 ~G~pvI~~~~~~~~~-----~~~~-~~~g~~~~~~~~~~l~~~i~~~~~~~~  346 (377)
T cd03798         301 CGLPVVATDVGGIPE-----IITD-GENGLLVPPGDPEALAEAILRLLADPW  346 (377)
T ss_pred             cCCCEEEecCCChHH-----HhcC-CcceeEECCCCHHHHHHHHHHHhcCcH
Confidence            999999987553322     2222 3334443  588999999999888763

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.56  E-value=3.2e-14  Score=107.94  Aligned_cols=114  Identities=18%  Similarity=0.142  Sum_probs=86.8

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      ++.++.++ |+.+|+++|. ++..+.++      +.. ++|.|.|.++.+++..+|+.||+++.|+. +++|++++|||+
T Consensus       218 ~~~~l~~~-~~~~l~i~G~-~~~~~~~~------~~~-~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a  288 (364)
T cd03814         218 ADLPLRRR-PPVRLVIVGD-GPARARLE------ARY-PNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMA  288 (364)
T ss_pred             HHHHhhhc-CCceEEEEeC-CchHHHHh------ccC-CcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHH
Confidence            34555555 8899999996 56555544      343 89999999999999999999999998874 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ||+|||+.+.......+     .. +-.+++.  .+.+++++...++.+|++
T Consensus       289 ~g~PvI~~~~~~~~~~i-----~~-~~~g~~~~~~~~~~l~~~i~~l~~~~~  334 (364)
T cd03814         289 SGLPVVAPDAGGPADIV-----TD-GENGLLVEPGDAEAFAAALAALLADPE  334 (364)
T ss_pred             cCCCEEEcCCCCchhhh-----cC-CcceEEcCCCCHHHHHHHHHHHHcCHH
Confidence            99999999866443332     22 2344444  467779999999988864

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=99.56  E-value=2.5e-14  Score=114.72  Aligned_cols=95  Identities=11%  Similarity=0.052  Sum_probs=75.5

Q ss_pred             HHHHHHHcCCCCCCEEEecCCCHHHHHHhhccc----cEEEcCCC-CCCchHHHHHHhcCCcEEecCCCchhhhhHHHHH
Q psy15363         28 IQATAQALGLDQHRILFSNVAAKEEHVRRGQLA----DVCLDTPL-CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL  102 (130)
Q Consensus        28 l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~----Dv~l~~~~-~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l  102 (130)
                      +++++++.++. ++|+|+|.++.+++..+|+.+    |+|+.|+. +++|++++|||+||+|||+++......     ++
T Consensus       306 ~~~~~~~~~l~-~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~e-----iv  379 (439)
T TIGR02472       306 VLLLIDRYDLY-GKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRD-----II  379 (439)
T ss_pred             HHHHHHHcCCC-ceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHH-----Hh
Confidence            45567889997 999999999999999999877    99988875 567999999999999999987543322     22


Q ss_pred             HhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363        103 ATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus       103 ~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                       ..|.++++.  .|.+++.+...++++|+
T Consensus       380 -~~~~~G~lv~~~d~~~la~~i~~ll~~~  407 (439)
T TIGR02472       380 -ANCRNGLLVDVLDLEAIASALEDALSDS  407 (439)
T ss_pred             -cCCCcEEEeCCCCHHHHHHHHHHHHhCH
Confidence             225556654  58899999888888875

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=99.56  E-value=5.7e-14  Score=107.33  Aligned_cols=115  Identities=11%  Similarity=0.038  Sum_probs=90.1

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      ++.++.++.|+.+|+++|+ ++..+.+++.++++++. ++|.|+|+.  +++..+|+.||+++.|+. +++|++++|||+
T Consensus       209 a~~~l~~~~~~~~l~i~G~-g~~~~~~~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a  284 (360)
T cd04951         209 AFAKLLSDYLDIKLLIAGD-GPLRATLERLIKALGLS-NRVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMA  284 (360)
T ss_pred             HHHHHHhhCCCeEEEEEcC-CCcHHHHHHHHHhcCCC-CcEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHH
Confidence            4566777789999999996 67778899999999987 899999976  567889999999998875 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCC--ceecCHHHHHHHHHHhccC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPE--LIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~--~va~~~~~y~~~a~~l~~d  128 (130)
                      +|+|||+.+......     +++.   .+  +-..|.+++.+...+++++
T Consensus       285 ~G~PvI~~~~~~~~e-----~i~~---~g~~~~~~~~~~~~~~i~~ll~~  326 (360)
T cd04951         285 CELPVVATDAGGVRE-----VVGD---SGLIVPISDPEALANKIDEILKM  326 (360)
T ss_pred             cCCCEEEecCCChhh-----EecC---CceEeCCCCHHHHHHHHHHHHhC
Confidence            999999986543322     2222   22  2237888999988888743

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.55  E-value=1.4e-14  Score=110.11  Aligned_cols=120  Identities=18%  Similarity=0.107  Sum_probs=91.4

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      ++.++.+..|+.+|+++|.++.......+..++.+.. ++|+|+|.++.+++..+|+.+|+++.|+. +++|.+++|||+
T Consensus       216 ~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a  294 (365)
T cd03809         216 AFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLG-DRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMA  294 (365)
T ss_pred             HHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCC-CeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhc
Confidence            4566777777899999996444444444445777886 99999999999999999999999998875 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCC--ceecCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPE--LIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~--~va~~~~~y~~~a~~l~~d~e  130 (130)
                      +|+|||+.+...+...+        +-.+  +...|.+++++...++++|++
T Consensus       295 ~G~pvI~~~~~~~~e~~--------~~~~~~~~~~~~~~~~~~i~~l~~~~~  338 (365)
T cd03809         295 CGTPVIASNISSLPEVA--------GDAALYFDPLDPEALAAAIERLLEDPA  338 (365)
T ss_pred             CCCcEEecCCCCcccee--------cCceeeeCCCCHHHHHHHHHHHhcCHH
Confidence            99999998765333322        1122  234678999999999888763

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.54  E-value=1.1e-13  Score=105.81  Aligned_cols=116  Identities=16%  Similarity=0.124  Sum_probs=85.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCccc---HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC--CCCCchHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVG---EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP--LCNGHTTSM   76 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~---~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~--~~~~g~~~l   76 (130)
                      ++.++.++.|+.+++++|.+...   .+.+++.++++++. ++|.|+|+  .+++..+|+.+|+++.|+  ++++|++++
T Consensus       206 ~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~-~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~  282 (355)
T cd03819         206 ALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQ-DRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAV  282 (355)
T ss_pred             HHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCc-ceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHH
Confidence            45666666789999999964221   24456677888986 89999999  567889999999999887  356799999


Q ss_pred             HHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhc
Q psy15363         77 DVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLG  126 (130)
Q Consensus        77 EAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~  126 (130)
                      |||+||+|||+.+......     ++.. +..+++.  .|.+++++....++
T Consensus       283 EA~a~G~PvI~~~~~~~~e-----~i~~-~~~g~~~~~~~~~~l~~~i~~~~  328 (355)
T cd03819         283 EAQAMGRPVIASDHGGARE-----TVRP-GETGLLVPPGDAEALAQALDQIL  328 (355)
T ss_pred             HHHhcCCCEEEcCCCCcHH-----HHhC-CCceEEeCCCCHHHHHHHHHHHH
Confidence            9999999999987543333     2322 3345443  57888888775444

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.52  E-value=1.3e-13  Score=109.83  Aligned_cols=124  Identities=19%  Similarity=0.235  Sum_probs=86.1

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccH-HHHHHHHHHcCCCC------------CCEEEecCCCHHHHHHhhccccEE-EcCC
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGE-ANIQATAQALGLDQ------------HRILFSNVAAKEEHVRRGQLADVC-LDTP   67 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~-~~l~~~~~~~g~~~------------~rv~f~g~~~~~~~~~~~~~~Dv~-l~~~   67 (130)
                      +|.++.++.|+.+|+++|. ++.+ +.+++.++++|+..            .+|.+.+.  ..++..+|+.||++ +.++
T Consensus       252 A~~~l~~~~~~~~liivG~-g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~--~~el~~~y~~aDi~~v~~S  328 (425)
T PRK05749        252 AHRALLKQFPNLLLILVPR-HPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDT--MGELGLLYAIADIAFVGGS  328 (425)
T ss_pred             HHHHHHHhCCCcEEEEcCC-ChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEec--HHHHHHHHHhCCEEEECCC
Confidence            5777888899999999996 5665 78999999999841            13333332  36899999999995 5444


Q ss_pred             -CCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         68 -LCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        68 -~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                       ..++|.+++|||+||+|||+.+...-..-. ...+...|. -+...|.+++.+...+|++|++
T Consensus       329 ~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~-~~~~~~~g~-~~~~~d~~~La~~l~~ll~~~~  390 (425)
T PRK05749        329 LVKRGGHNPLEPAAFGVPVISGPHTFNFKEI-FERLLQAGA-AIQVEDAEDLAKAVTYLLTDPD  390 (425)
T ss_pred             cCCCCCCCHHHHHHhCCCEEECCCccCHHHH-HHHHHHCCC-eEEECCHHHHHHHHHHHhcCHH
Confidence             356899999999999999986532111111 112222221 1224788999999999988864

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.52  E-value=1e-13  Score=104.07  Aligned_cols=119  Identities=18%  Similarity=0.162  Sum_probs=87.7

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHH-HHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQAT-AQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~-~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      ++.++.+..|+.+|+++|. +......+.. +.+.+.. ++|.|.|.  .+++..+|+.||+++.|+. ++.|++++|||
T Consensus       209 ~~~~l~~~~~~~~l~i~G~-~~~~~~~~~~~~~~~~~~-~~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~  284 (359)
T cd03808         209 AARILKAKGPNVRLLLVGD-GDEENPAAILEIEKLGLE-GRVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAM  284 (359)
T ss_pred             HHHHHHhcCCCeEEEEEcC-CCcchhhHHHHHHhcCCc-ceEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHH
Confidence            3555666679999999996 4443333333 6666775 89999998  4678899999999998875 56799999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      +||+|||+.+......     ++. .+..+++.  +|.+++++...++.+|++
T Consensus       285 ~~G~Pvi~s~~~~~~~-----~i~-~~~~g~~~~~~~~~~~~~~i~~l~~~~~  331 (359)
T cd03808         285 AMGRPVIATDVPGCRE-----AVI-DGVNGFLVPPGDAEALADAIERLIEDPE  331 (359)
T ss_pred             HcCCCEEEecCCCchh-----hhh-cCcceEEECCCCHHHHHHHHHHHHhCHH
Confidence            9999999986553322     222 14445554  468999999998888763

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=99.52  E-value=9.1e-14  Score=120.68  Aligned_cols=98  Identities=12%  Similarity=0.128  Sum_probs=79.1

Q ss_pred             HHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccc----cEEEcCCC-CCCchHHHHHHhcCCcEEecCCCchhhhhHHH
Q psy15363         26 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA----DVCLDTPL-CNGHTTSMDVLWTGTPVVTLPGETLASRVAAS  100 (130)
Q Consensus        26 ~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~----Dv~l~~~~-~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~  100 (130)
                      ..++++++++++. ++|.|+|+++.+++..+|+.|    |+|+.|+. +++|++++|||+||+|||+++......     
T Consensus       535 ~~L~~li~~lgL~-g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~E-----  608 (1050)
T TIGR02468       535 TSVLKLIDKYDLY-GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVD-----  608 (1050)
T ss_pred             HHHHHHHHHhCCC-CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHH-----
Confidence            4577889999997 999999999999999999988    69998875 678999999999999999986443322     


Q ss_pred             HHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363        101 QLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus       101 ~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ++ ..|.++++.  .|.+++.+...++++|++
T Consensus       609 II-~~g~nGlLVdP~D~eaLA~AL~~LL~Dpe  639 (1050)
T TIGR02468       609 IH-RVLDNGLLVDPHDQQAIADALLKLVADKQ  639 (1050)
T ss_pred             Hh-ccCCcEEEECCCCHHHHHHHHHHHhhCHH
Confidence            22 125667655  488999999999988863

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.52  E-value=1.8e-13  Score=103.51  Aligned_cols=109  Identities=18%  Similarity=0.077  Sum_probs=82.2

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC--CCCchHHHHHHhcCCcEEec
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--CNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~~~g~~~lEAla~G~PvV~~   88 (130)
                      |+.+|+++|. ++.....+...   +.. ++|+|.|+++.+++..+|+.+|+++.|+.  +++|++++|||+||+|||+.
T Consensus       219 ~~~~l~i~G~-~~~~~~~~~~~---~~~-~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~  293 (359)
T cd03823         219 GDIELVIVGN-GLELEEESYEL---EGD-PRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIAS  293 (359)
T ss_pred             cCcEEEEEcC-chhhhHHHHhh---cCC-CeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEEC
Confidence            7899999996 44433333222   554 89999999999999999999999998874  56899999999999999998


Q ss_pred             CCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         89 PGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        89 ~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      +.......     +. .+..+++.  .|.+++++...++.+|++
T Consensus       294 ~~~~~~e~-----i~-~~~~g~~~~~~d~~~l~~~i~~l~~~~~  331 (359)
T cd03823         294 DIGGMAEL-----VR-DGVNGLLFPPGDAEDLAAALERLIDDPD  331 (359)
T ss_pred             CCCCHHHH-----hc-CCCcEEEECCCCHHHHHHHHHHHHhChH
Confidence            76543332     22 23345444  457999999999988763

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.52  E-value=1.7e-13  Score=102.47  Aligned_cols=118  Identities=19%  Similarity=0.146  Sum_probs=88.0

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|.++.++.|+.+|+++|. ++..+.+++.++++++. ++|.|.|..+  ++..+|+.||+++.|+. ++.|++++|||+
T Consensus       210 ~~~~l~~~~~~~~l~i~G~-~~~~~~~~~~~~~~~~~-~~v~~~g~~~--~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~  285 (353)
T cd03811         210 AFALLRKEGPDARLVILGD-GPLREELEALAKELGLA-DRVHFLGFQS--NPYPYLKAADLFVLSSRYEGFPNVLLEAMA  285 (353)
T ss_pred             HHHHhhhcCCCceEEEEcC-CccHHHHHHHHHhcCCC-ccEEEecccC--CHHHHHHhCCEEEeCcccCCCCcHHHHHHH
Confidence            4566666678999999996 57777888899999987 8999999964  56788999999998876 467999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHH---HHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEY---QDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y---~~~a~~l~~d~  129 (130)
                      +|+|||+.+......     ++. .+..+++.  ++.+++   ++....+..|+
T Consensus       286 ~G~PvI~~~~~~~~e-----~i~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  333 (353)
T cd03811         286 LGTPVVATDCPGPRE-----ILE-DGENGLLVPVGDEAALAAAALALLDLLLDP  333 (353)
T ss_pred             hCCCEEEcCCCChHH-----Hhc-CCCceEEECCCCHHHHHHHHHHHHhccCCh
Confidence            999999986553322     222 24455554  355666   55555555554

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.52  E-value=1.8e-13  Score=103.20  Aligned_cols=116  Identities=19%  Similarity=0.206  Sum_probs=89.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHH-HcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQ-ALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~-~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      ++.++.++.|+.+|+++|. ++..+.+++... +.++. ++|.|.|..  +++..+|+.||+++.|+. +++|++++|||
T Consensus       214 a~~~l~~~~~~~~l~i~G~-~~~~~~~~~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~  289 (365)
T cd03807         214 AAALLLKKFPNARLLLVGD-GPDRANLELLALKELGLE-DKVILLGER--SDVPALLNALDVFVLSSLSEGFPNVLLEAM  289 (365)
T ss_pred             HHHHHHHhCCCeEEEEecC-CcchhHHHHHHHHhcCCC-ceEEEcccc--ccHHHHHHhCCEEEeCCccccCCcHHHHHH
Confidence            4566677789999999996 566666677666 88886 899999965  578889999999998875 46799999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +||+|||+.+......     ++..   .+++.  .|.+++.+...++++|+
T Consensus       290 a~g~PvI~~~~~~~~e-----~~~~---~g~~~~~~~~~~l~~~i~~l~~~~  333 (365)
T cd03807         290 ACGLPVVATDVGDNAE-----LVGD---TGFLVPPGDPEALAEAIEALLADP  333 (365)
T ss_pred             hcCCCEEEcCCCChHH-----Hhhc---CCEEeCCCCHHHHHHHHHHHHhCh
Confidence            9999999986543322     2222   34333  57889999999888875

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.51  E-value=1e-13  Score=106.21  Aligned_cols=108  Identities=14%  Similarity=0.109  Sum_probs=79.2

Q ss_pred             CcEEEEeecCcccHHHHHHHHH-HcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC--CCCchHHHHHHhcCCcEEec
Q psy15363         12 NSILWLLKFPAVGEANIQATAQ-ALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--CNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~-~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~~~g~~~lEAla~G~PvV~~   88 (130)
                      +.+|+++|+ ++..+.+++.++ +++.. ++|+|+|+++.+++..+|+.+|+++.|+.  ++.|++++|||+||+|||++
T Consensus       221 ~~~l~ivG~-~~~~~~~~~~~~~~~~~~-~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s  298 (363)
T cd04955         221 GKKLVIVGN-ADHNTPYGKLLKEKAAAD-PRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLAS  298 (363)
T ss_pred             CceEEEEcC-CCCcchHHHHHHHHhCCC-CcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEe
Confidence            799999996 444445555554 67776 89999999999999999999999987764  56799999999999999998


Q ss_pred             CCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         89 PGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        89 ~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      +......-     +   +-.+++.+..+.+.+...++++|+
T Consensus       299 ~~~~~~e~-----~---~~~g~~~~~~~~l~~~i~~l~~~~  331 (363)
T cd04955         299 DNPFNREV-----L---GDKAIYFKVGDDLASLLEELEADP  331 (363)
T ss_pred             cCCcccee-----e---cCCeeEecCchHHHHHHHHHHhCH
Confidence            64422211     1   123444343344777777777765

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.51  E-value=2.2e-13  Score=103.25  Aligned_cols=118  Identities=19%  Similarity=0.195  Sum_probs=88.5

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCC------CchHHH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCN------GHTTSM   76 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~------~g~~~l   76 (130)
                      +.++.+. |+.+|+++|. ++..+.+++.....+.  ++|.|.|.++.+++..+|+.+|+++.|+..+      .+++++
T Consensus       242 ~~~l~~~-~~~~l~i~G~-~~~~~~~~~~~~~~~~--~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~  317 (394)
T cd03794         242 AALLKDR-PDIRFLIVGD-GPEKEELKELAKALGL--DNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLF  317 (394)
T ss_pred             HHHHhhc-CCeEEEEeCC-cccHHHHHHHHHHcCC--CcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHH
Confidence            4455555 7899999996 5777778887777676  6899999999999999999999999876532      267799


Q ss_pred             HHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         77 DVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        77 EAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      |||+||+|||+.+......-.     .. +-.+++.  .|.+++++...++++|++
T Consensus       318 Ea~~~G~pvi~~~~~~~~~~~-----~~-~~~g~~~~~~~~~~l~~~i~~~~~~~~  367 (394)
T cd03794         318 EYMAAGKPVLASVDGESAELV-----EE-AGAGLVVPPGDPEALAAAILELLDDPE  367 (394)
T ss_pred             HHHHCCCcEEEecCCCchhhh-----cc-CCcceEeCCCCHHHHHHHHHHHHhChH
Confidence            999999999998765332222     11 2233333  378999999999887763

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.50  E-value=1.7e-14  Score=97.49  Aligned_cols=110  Identities=19%  Similarity=0.184  Sum_probs=75.7

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC--CCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC--NGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~--~~g~~~lEAl   79 (130)
                      +|.++.++.|+.+|.++|. ++.  .++++     . .++|+|.|++  +++..+++.||+++.|+..  +.+++++|+|
T Consensus        24 ~~~~l~~~~p~~~l~i~G~-~~~--~l~~~-----~-~~~v~~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~   92 (135)
T PF13692_consen   24 ALERLKEKHPDIELIIIGN-GPD--ELKRL-----R-RPNVRFHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAM   92 (135)
T ss_dssp             HHHHHHHHSTTEEEEEECE-SS---HHCCH-----H-HCTEEEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHH
T ss_pred             HHHHHHHHCcCEEEEEEeC-CHH--HHHHh-----c-CCCEEEcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHH
Confidence            6788899999999999996 444  24444     2 2699999999  5899999999999998753  4689999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccC
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d  128 (130)
                      ++|+|||+.+..      ...+....+.+-++..|.+++++...+|++|
T Consensus        93 ~~G~pvi~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~d  135 (135)
T PF13692_consen   93 AAGKPVIASDNG------AEGIVEEDGCGVLVANDPEELAEAIERLLND  135 (135)
T ss_dssp             CTT--EEEEHHH------CHCHS---SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred             HhCCCEEECCcc------hhhheeecCCeEEECCCHHHHHHHHHHHhcC
Confidence            999999997641      1122222344456678999999999999887

>TIGR02470 sucr_synth sucrose synthase

Probab=99.49  E-value=2.9e-13  Score=115.18  Aligned_cols=117  Identities=9%  Similarity=-0.055  Sum_probs=80.9

Q ss_pred             HHHHHhhCCCcEEEEeecCcc-----------cHHHHHHHHHHcCCCCCCEEEecCC-CHHHHHHhhc----cccEEEcC
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV-----------GEANIQATAQALGLDQHRILFSNVA-AKEEHVRRGQ----LADVCLDT   66 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~-----------~~~~l~~~~~~~g~~~~rv~f~g~~-~~~~~~~~~~----~~Dv~l~~   66 (130)
                      |+++.+..++++|+|+|++..           ..+.++++++++|+. ++|.|+|.. +..+...+|+    .+|+|+.|
T Consensus       572 ~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~-g~V~flG~~~~~~~~~elyr~iAd~adVfV~P  650 (784)
T TIGR02470       572 YGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH-GQIRWIGAQLNRVRNGELYRYIADTKGIFVQP  650 (784)
T ss_pred             HHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC-CeEEEccCcCCcccHHHHHHHhhccCcEEEEC
Confidence            444433446789999996321           123567788999998 999999975 4444444443    35899888


Q ss_pred             CC-CCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhc
Q psy15363         67 PL-CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG  126 (130)
Q Consensus        67 ~~-~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~  126 (130)
                      +. +++|++++|||+||+|||+++......-     + ..|.++++.+  |.+++.+...+++
T Consensus       651 S~~EpFGLvvLEAMAcGlPVVAT~~GG~~Ei-----V-~dg~tGfLVdp~D~eaLA~aL~~ll  707 (784)
T TIGR02470       651 ALYEAFGLTVLEAMTCGLPTFATRFGGPLEI-----I-QDGVSGFHIDPYHGEEAAEKIVDFF  707 (784)
T ss_pred             CcccCCCHHHHHHHHcCCCEEEcCCCCHHHH-----h-cCCCcEEEeCCCCHHHHHHHHHHHH
Confidence            75 5789999999999999999865433322     2 1366776653  6788887777654

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>PLN00142 sucrose synthase

Probab=99.49  E-value=4.6e-13  Score=114.17  Aligned_cols=117  Identities=9%  Similarity=-0.054  Sum_probs=83.9

Q ss_pred             hHHHHHhhCCCcEEEEeecCc-c----cH------HHHHHHHHHcCCCCCCEEEecCC----CHHHHHHhhc-cccEEEc
Q psy15363          2 SDIFVLKAVPNSILWLLKFPA-V----GE------ANIQATAQALGLDQHRILFSNVA----AKEEHVRRGQ-LADVCLD   65 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~-~----~~------~~l~~~~~~~g~~~~rv~f~g~~----~~~~~~~~~~-~~Dv~l~   65 (130)
                      +|+++.+..|+++|+|+|++. +    +.      +.++++++++|+. ++|.|+|..    +..++..+++ .+|+|+.
T Consensus       594 A~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~-~~V~flG~~~~~~~~~eLyr~iadaaDVfVl  672 (815)
T PLN00142        594 WYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK-GQFRWIAAQTNRVRNGELYRYIADTKGAFVQ  672 (815)
T ss_pred             HHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC-CcEEEcCCcCCcccHHHHHHHHHhhCCEEEe
Confidence            456665667789999999641 1    11      3467788999998 999999854    3466766666 4799998


Q ss_pred             CCC-CCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHh
Q psy15363         66 TPL-CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRL  125 (130)
Q Consensus        66 ~~~-~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l  125 (130)
                      |+. +++|++++|||+||+|||+++......     ++ ..|.++++.  .|.+++.+...++
T Consensus       673 PS~~EgFGLvvLEAMA~GlPVVATdvGG~~E-----IV-~dG~tG~LV~P~D~eaLA~aI~~l  729 (815)
T PLN00142        673 PALYEAFGLTVVEAMTCGLPTFATCQGGPAE-----II-VDGVSGFHIDPYHGDEAANKIADF  729 (815)
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEcCCCCHHH-----Hh-cCCCcEEEeCCCCHHHHHHHHHHH
Confidence            875 568999999999999999986543322     22 237777765  3778877776543

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.46  E-value=3.9e-13  Score=102.88  Aligned_cols=113  Identities=19%  Similarity=0.110  Sum_probs=82.0

Q ss_pred             HHHHHhh-CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCC-HHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          3 DIFVLKA-VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA-KEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         3 w~~il~~-~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~-~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      |.++.++ .|+.+++++|. ++....       .+.. ++|.|+|+++ .+++..+|+.||+++.|+. +++|.+++|||
T Consensus       215 ~~~l~~~~~~~~~~~i~G~-~~~~~~-------~~~~-~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam  285 (365)
T cd03825         215 LKRLAERWKDDIELVVFGA-SDPEIP-------PDLP-FPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEAL  285 (365)
T ss_pred             HHHhhhccCCCeEEEEeCC-Cchhhh-------ccCC-CceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHH
Confidence            4443333 58899999986 332211       1555 8999999999 7889999999999998875 57899999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      +||+|||+.+.......+.      .+..+++.  .|.+++++...++.+|++
T Consensus       286 ~~g~PvI~~~~~~~~e~~~------~~~~g~~~~~~~~~~~~~~l~~l~~~~~  332 (365)
T cd03825         286 ACGTPVVAFDVGGIPDIVD------HGVTGYLAKPGDPEDLAEGIEWLLADPD  332 (365)
T ss_pred             hcCCCEEEecCCCChhhee------CCCceEEeCCCCHHHHHHHHHHHHhCHH
Confidence            9999999986543333221      13345544  378899999888888763

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>PHA01633 putative glycosyl transferase group 1

Probab=99.46  E-value=4.9e-13  Score=104.63  Aligned_cols=80  Identities=11%  Similarity=0.032  Sum_probs=63.9

Q ss_pred             hHHHHHhhCCC----cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe---cCCCHHHHHHhhccccEEEcCCC-CCCch
Q psy15363          2 SDIFVLKAVPN----SILWLLKFPAVGEANIQATAQALGLDQHRILFS---NVAAKEEHVRRGQLADVCLDTPL-CNGHT   73 (130)
Q Consensus         2 ~w~~il~~~P~----a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~---g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~   73 (130)
                      +|.++.++.|+    .+++++|+     +    ..+++++. ++|+|+   |.++.+++..+|+.+|+|+.|+. +++|+
T Consensus       169 A~~~L~~~~p~~~~~i~l~ivG~-----~----~~~~l~l~-~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGl  238 (335)
T PHA01633        169 VFNELNTKYPDIAKKIHFFVISH-----K----QFTQLEVP-ANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGM  238 (335)
T ss_pred             HHHHHHHhCCCccccEEEEEEcH-----H----HHHHcCCC-CcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCH
Confidence            57778778775    47777763     1    23567786 899999   55678899999999999998875 67899


Q ss_pred             HHHHHHhcCCcEEecCCC
Q psy15363         74 TSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        74 ~~lEAla~G~PvV~~~g~   91 (130)
                      +++|||+||+|||+.+-.
T Consensus       239 vlLEAMA~G~PVVas~~~  256 (335)
T PHA01633        239 PVLESMAMGTPVIHQLMP  256 (335)
T ss_pred             HHHHHHHcCCCEEEccCC
Confidence            999999999999998544

>PHA01630 putative group 1 glycosyl transferase

Probab=99.46  E-value=6.2e-13  Score=103.78  Aligned_cols=117  Identities=7%  Similarity=-0.037  Sum_probs=78.8

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|+++.++.|+.+++++|+ +..+..+      .++. +   +.+.++.+++..+|+.||+|+.|+. +++|++++|||+
T Consensus       163 A~~~l~~~~~~~~llivG~-~~~~~~l------~~~~-~---~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA  231 (331)
T PHA01630        163 IFHELQNEGYDFYFLIKSS-NMLDPRL------FGLN-G---VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALA  231 (331)
T ss_pred             HHHHHHhhCCCEEEEEEeC-cccchhh------cccc-c---eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHH
Confidence            5777777889999999995 3332221      1332 2   3567889999999999999998885 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHH---HHHh------------cCCCCceecCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAAS---QLAT------------LGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~---~l~~------------~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+++...+..-+..+   ++-.            -+..-++..+.++..+.+.+++.|+
T Consensus       232 ~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~  295 (331)
T PHA01630        232 LGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANW  295 (331)
T ss_pred             cCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHhCC
Confidence            99999998754333222110   0000            0111233457788888888888763

>PLN02939 transferase, transferring glycosyl groups

Probab=99.42  E-value=2.1e-12  Score=111.28  Aligned_cols=120  Identities=9%  Similarity=-0.060  Sum_probs=83.0

Q ss_pred             HHHHHhhCCCcEEEEeecCccc---HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVG---EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDV   78 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~---~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEA   78 (130)
                      |.++++  ++.+|+|+|+ |+.   ++.++++++++++. ++|.|+|..+......+|+.+|+|+.|+. +++|++.+||
T Consensus       801 ~~~Ll~--~dvqLVIvGd-Gp~~~~e~eL~~La~~l~l~-drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEA  876 (977)
T PLN02939        801 IYKTAE--LGGQFVLLGS-SPVPHIQREFEGIADQFQSN-NNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIA  876 (977)
T ss_pred             HHHHhh--cCCEEEEEeC-CCcHHHHHHHHHHHHHcCCC-CeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHH
Confidence            444443  5799999996 443   46788889999987 99999999987766789999999999886 4689999999


Q ss_pred             HhcCCcEEecCCCchhhhhHH---HHHHhcCCCCcee--cCHHHHHHHHHHhc
Q psy15363         79 LWTGTPVVTLPGETLASRVAA---SQLATLGCPELIA--RTHKEYQDIAIRLG  126 (130)
Q Consensus        79 la~G~PvV~~~g~~~~~r~~~---~~l~~~g~~~~va--~~~~~y~~~a~~l~  126 (130)
                      |+||+|+|+.+......-+..   ......|.++++.  .|++++.+...+++
T Consensus       877 MAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL  929 (977)
T PLN02939        877 MRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAF  929 (977)
T ss_pred             HHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHH
Confidence            999998887643322211100   0000113455543  47777766555543

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=99.41  E-value=3.5e-12  Score=99.31  Aligned_cols=113  Identities=16%  Similarity=0.136  Sum_probs=81.3

Q ss_pred             CCcEEEEeecCccc---HHHHHHHHHHcCCCCCCEEEe-cCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhcCCcE
Q psy15363         11 PNSILWLLKFPAVG---EANIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTGTPV   85 (130)
Q Consensus        11 P~a~l~i~g~~~~~---~~~l~~~~~~~g~~~~rv~f~-g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G~Pv   85 (130)
                      ++.+++++|+++..   .+.+++.+++++...++++|. |.++.+++..+|+.||+|+.|+. +++|++++|||+||+||
T Consensus       228 ~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~Pv  307 (388)
T TIGR02149       228 KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPV  307 (388)
T ss_pred             hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCE
Confidence            57888888753222   355677777777644567765 67899999999999999998875 56799999999999999


Q ss_pred             EecCCCchhhhhHHHHHHhcCCCCcee--cCH------HHHHHHHHHhccCC
Q psy15363         86 VTLPGETLASRVAASQLATLGCPELIA--RTH------KEYQDIAIRLGTDR  129 (130)
Q Consensus        86 V~~~g~~~~~r~~~~~l~~~g~~~~va--~~~------~~y~~~a~~l~~d~  129 (130)
                      |+++.....     .++. .+..+++.  .+.      +++.+...++.+|+
T Consensus       308 I~s~~~~~~-----e~i~-~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~  353 (388)
T TIGR02149       308 VASATGGIP-----EVVV-DGETGFLVPPDNSDADGFQAELAKAINILLADP  353 (388)
T ss_pred             EEeCCCCHH-----HHhh-CCCceEEcCCCCCcccchHHHHHHHHHHHHhCH
Confidence            998754332     2222 24445543  244      78888888887775

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>PRK14098 glycogen synthase; Provisional

Probab=99.39  E-value=4.4e-12  Score=103.57  Aligned_cols=114  Identities=11%  Similarity=-0.076  Sum_probs=79.8

Q ss_pred             HHHHHhhCCCcEEEEeecCcc--cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV--GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~--~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      +.++++  ++.+|+++|+ |+  .++.+++++++++   +||.|.|.++.++...+|+.+|+|+.||. +++|++.+|||
T Consensus       329 ~~~l~~--~~~~lvivG~-G~~~~~~~l~~l~~~~~---~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAm  402 (489)
T PRK14098        329 LEKLVE--LDIQLVICGS-GDKEYEKRFQDFAEEHP---EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAM  402 (489)
T ss_pred             HHHHHh--cCcEEEEEeC-CCHHHHHHHHHHHHHCC---CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHH
Confidence            445543  4799999996 44  3578888888763   79999999999888999999999998885 56899999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHH
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIR  124 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~  124 (130)
                      +||+|+|+........-+..  +...+-++++.  .|.+++.+...+
T Consensus       403 a~G~ppVv~~~GGl~d~v~~--~~~~~~~G~l~~~~d~~~la~ai~~  447 (489)
T PRK14098        403 SYGTIPVAYAGGGIVETIEE--VSEDKGSGFIFHDYTPEALVAKLGE  447 (489)
T ss_pred             hCCCCeEEecCCCCceeeec--CCCCCCceeEeCCCCHHHHHHHHHH
Confidence            99998887654322211100  00013345543  367777666554

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.38  E-value=4e-12  Score=90.67  Aligned_cols=88  Identities=17%  Similarity=0.073  Sum_probs=70.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCC-HHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA-KEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~-~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      ++.++.++.|+.+++++|. +......++...+.+.. ++|.|.|.++ .+++..+++.||+++.|+. ++.|++++|||
T Consensus       125 a~~~l~~~~~~~~~~i~G~-~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam  202 (229)
T cd01635         125 AFALLKERGPDLKLVIAGD-GPEREYLEELLAALLLL-DRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAM  202 (229)
T ss_pred             HHHHHHHhCCCeEEEEEeC-CCChHHHHHHHHhcCCc-ccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHH
Confidence            4667777889999999996 45555555556777776 8999999985 4555566666999998875 56799999999


Q ss_pred             hcCCcEEecCCC
Q psy15363         80 WTGTPVVTLPGE   91 (130)
Q Consensus        80 a~G~PvV~~~g~   91 (130)
                      +||+|+|+.+..
T Consensus       203 ~~g~pvi~s~~~  214 (229)
T cd01635         203 ACGLPVIATDVG  214 (229)
T ss_pred             hCCCCEEEcCCC
Confidence            999999998765

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.37  E-value=5e-12  Score=99.42  Aligned_cols=111  Identities=17%  Similarity=0.006  Sum_probs=78.8

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC------CCchHHH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC------NGHTTSM   76 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~------~~g~~~l   76 (130)
                      ..++.+..|+.+++++|. ++......+   ...  .++|+|+|.++++++..+|+.+|+++.|+..      +.++.++
T Consensus       223 l~~la~~~p~~~~vliG~-~~~~~~~~~---~~~--~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~  296 (373)
T cd04950         223 LEALAKARPDWSFVLIGP-VDVSIDPSA---LLR--LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLF  296 (373)
T ss_pred             HHHHHHHCCCCEEEEECC-CcCccChhH---hcc--CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHH
Confidence            456677889999999996 322111111   112  2799999999999999999999999988742      3578999


Q ss_pred             HHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhcc
Q psy15363         77 DVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        77 EAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~  127 (130)
                      |+|+||+|||+++..        ++....+...++..|.+++++...+++.
T Consensus       297 EylA~G~PVVat~~~--------~~~~~~~~~~~~~~d~~~~~~ai~~~l~  339 (373)
T cd04950         297 EYLAAGKPVVATPLP--------EVRRYEDEVVLIADDPEEFVAAIEKALL  339 (373)
T ss_pred             HHhccCCCEEecCcH--------HHHhhcCcEEEeCCCHHHHHHHHHHHHh
Confidence            999999999987532        2222222112345689999999988543

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.36  E-value=8.4e-12  Score=97.93  Aligned_cols=115  Identities=12%  Similarity=0.053  Sum_probs=79.7

Q ss_pred             HhhCCCcEEEEeecCc-ccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcE
Q psy15363          7 LKAVPNSILWLLKFPA-VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPV   85 (130)
Q Consensus         7 l~~~P~a~l~i~g~~~-~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~Pv   85 (130)
                      +.+.|+.+++++++++ ..++.+++++++++   ++|+|+|+++  ++..+|+.||+++.   ..+|++++|||+||+||
T Consensus       225 l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~---~~v~~~g~~~--~~~~l~~~aD~~v~---~~gg~t~~EA~a~g~Pv  296 (380)
T PRK13609        225 LMSVPDLQVVVVCGKNEALKQSLEDLQETNP---DALKVFGYVE--NIDELFRVTSCMIT---KPGGITLSEAAALGVPV  296 (380)
T ss_pred             HhhCCCcEEEEEeCCCHHHHHHHHHHHhcCC---CcEEEEechh--hHHHHHHhccEEEe---CCCchHHHHHHHhCCCE
Confidence            3455889988876422 34567777776654   6899999984  56788999999983   35689999999999999


Q ss_pred             EecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         86 VTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        86 V~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      |+...........+.++...|. .+...+.+++.+...++++|++
T Consensus       297 I~~~~~~g~~~~n~~~~~~~G~-~~~~~~~~~l~~~i~~ll~~~~  340 (380)
T PRK13609        297 ILYKPVPGQEKENAMYFERKGA-AVVIRDDEEVFAKTEALLQDDM  340 (380)
T ss_pred             EECCCCCCcchHHHHHHHhCCc-EEEECCHHHHHHHHHHHHCCHH
Confidence            9864211111222234444444 2455788999998888888763

>PRK00654 glgA glycogen synthase; Provisional

Probab=99.35  E-value=1.3e-11  Score=99.97  Aligned_cols=121  Identities=16%  Similarity=-0.047  Sum_probs=78.0

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      +|++++++  +.+|+++|++.+ .++.+++++++++   +++.|....+.+....+|+.||+|+.|+. +++|++.+|||
T Consensus       303 a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAm  377 (466)
T PRK00654        303 ALPELLEQ--GGQLVLLGTGDPELEEAFRALAARYP---GKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYAL  377 (466)
T ss_pred             HHHHHHhc--CCEEEEEecCcHHHHHHHHHHHHHCC---CcEEEEEeCCHHHHHHHHhhCCEEEeCCCCCCchHHHHHHH
Confidence            45556543  799999996322 3567888888876   46665433465556688999999999886 46799999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhcc
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT  127 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~  127 (130)
                      +||+|+|+.+......-+...--...+-.+++.  .|.+++.+...++++
T Consensus       378 a~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~  427 (466)
T PRK00654        378 RYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALE  427 (466)
T ss_pred             HCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHH
Confidence            999999987543222211000000001335543  477788777766554

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=99.34  E-value=1.1e-11  Score=100.31  Aligned_cols=121  Identities=12%  Similarity=-0.078  Sum_probs=81.4

Q ss_pred             hHHHHHhhCCCcEEEEeecCc-ccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPA-VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~-~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAl   79 (130)
                      ++.++.++  +.+|+++|++. ..++.+++++++++   +++.|.+..+.++...+|+.||+++.|+.+ ++|++.+|||
T Consensus       312 a~~~l~~~--~~~lvi~G~g~~~~~~~l~~~~~~~~---~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAm  386 (473)
T TIGR02095       312 ALPELLEL--GGQLVVLGTGDPELEEALRELAERYP---GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAM  386 (473)
T ss_pred             HHHHHHHc--CcEEEEECCCCHHHHHHHHHHHHHCC---CcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHH
Confidence            34455433  49999999642 23567777777654   689999888888888899999999998865 6799999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhcc
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT  127 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~  127 (130)
                      +||+|||+.+......-+...--...+-.+++.  .|.+++.+...+++.
T Consensus       387 a~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~  436 (473)
T TIGR02095       387 RYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALR  436 (473)
T ss_pred             HCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHH
Confidence            999999998654332211100000011345543  477787777666554

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>PLN02316 synthase/transferase

Probab=99.32  E-value=2e-11  Score=106.39  Aligned_cols=123  Identities=15%  Similarity=-0.031  Sum_probs=81.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCccc---HHHHHHHHHHcCCC-CCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVG---EANIQATAQALGLD-QHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSM   76 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~---~~~l~~~~~~~g~~-~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~l   76 (130)
                      +++++++  ++++|+|+|+ |++   ++.++++++++|+. ++||.|.+..+......+|+.||+||.||. +++|++.+
T Consensus       861 Al~~ll~--~~~qlVIvG~-Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqL  937 (1036)
T PLN02316        861 AIWRTLE--RNGQVVLLGS-APDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQL  937 (1036)
T ss_pred             HHHHHhh--cCcEEEEEeC-CCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHH
Confidence            3455554  4799999996 443   46788899988874 379999987765433478999999998886 56899999


Q ss_pred             HHHhcCCcEEecCCCchhhhhHHH-------HHHhcCCCCceec--CHHHHHHHHHHhcc
Q psy15363         77 DVLWTGTPVVTLPGETLASRVAAS-------QLATLGCPELIAR--THKEYQDIAIRLGT  127 (130)
Q Consensus        77 EAla~G~PvV~~~g~~~~~r~~~~-------~l~~~g~~~~va~--~~~~y~~~a~~l~~  127 (130)
                      |||+||+|+|+.+......-+...       -....+-++|+.+  |.+++.....+++.
T Consensus       938 EAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~  997 (1036)
T PLN02316        938 TAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAIS  997 (1036)
T ss_pred             HHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHh
Confidence            999999887776543332221100       0000123455543  66666666555554

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.32  E-value=6.7e-12  Score=101.74  Aligned_cols=119  Identities=16%  Similarity=0.080  Sum_probs=80.7

Q ss_pred             hHHHHHhhCCC----cEEEEeecCc----ccHHHHH----HHHHHcCCC-----CCCEE-EecCCCHHHHHHhhccccEE
Q psy15363          2 SDIFVLKAVPN----SILWLLKFPA----VGEANIQ----ATAQALGLD-----QHRIL-FSNVAAKEEHVRRGQLADVC   63 (130)
Q Consensus         2 ~w~~il~~~P~----a~l~i~g~~~----~~~~~l~----~~~~~~g~~-----~~rv~-f~g~~~~~~~~~~~~~~Dv~   63 (130)
                      +|.+++++.|+    .+|+++|.+.    +..+.++    +++++.+..     ...|+ |.|.++.+++..+|+.||+|
T Consensus       285 A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~  364 (460)
T cd03788         285 AFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVA  364 (460)
T ss_pred             HHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEE
Confidence            57788889997    5788887431    2233343    333332211     12354 45788999999999999999


Q ss_pred             EcCCC-CCCchHHHHHHhcCCc----EEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         64 LDTPL-CNGHTTSMDVLWTGTP----VVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        64 l~~~~-~~~g~~~lEAla~G~P----vV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +.|+. ++.|++++|||+||+|    ||+....      +..-  . +.++++.  .|.+++.+...++++++
T Consensus       365 v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~------G~~~--~-~~~g~lv~p~d~~~la~ai~~~l~~~  428 (460)
T cd03788         365 LVTPLRDGMNLVAKEYVACQDDDPGVLILSEFA------GAAE--E-LSGALLVNPYDIDEVADAIHRALTMP  428 (460)
T ss_pred             EeCccccccCcccceeEEEecCCCceEEEeccc------cchh--h-cCCCEEECCCCHHHHHHHHHHHHcCC
Confidence            98875 6779999999999999    6665321      1100  1 3445554  48899999888888765

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.27  E-value=3.5e-11  Score=97.64  Aligned_cols=120  Identities=18%  Similarity=0.125  Sum_probs=80.8

Q ss_pred             ChHHHHHhhCCC----cEEEEeecC----cccHHHHHHHHHHc--------CCC-C-CCEEEecCCCHHHHHHhhccccE
Q psy15363          1 MSDIFVLKAVPN----SILWLLKFP----AVGEANIQATAQAL--------GLD-Q-HRILFSNVAAKEEHVRRGQLADV   62 (130)
Q Consensus         1 ~~w~~il~~~P~----a~l~i~g~~----~~~~~~l~~~~~~~--------g~~-~-~rv~f~g~~~~~~~~~~~~~~Dv   62 (130)
                      ++|.+++++.|+    .+|+++|.+    ++..+.+++.++++        |.. . .-+.|.+.++.+++.++|+.||+
T Consensus       279 ~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv  358 (456)
T TIGR02400       279 LAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADV  358 (456)
T ss_pred             HHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcE
Confidence            367888999997    457777632    23345566666554        211 0 12344567889999999999999


Q ss_pred             EEcCCC-CCCchHHHHHHhcCCc----EEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         63 CLDTPL-CNGHTTSMDVLWTGTP----VVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        63 ~l~~~~-~~~g~~~lEAla~G~P----vV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      |+.|+. ++.|++++|||+||+|    ||+......     +..+   + ++++.  .|.+++.+...++++++
T Consensus       359 ~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~-----~~~l---~-~gllVnP~d~~~lA~aI~~aL~~~  423 (456)
T TIGR02400       359 GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA-----AQEL---N-GALLVNPYDIDGMADAIARALTMP  423 (456)
T ss_pred             EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC-----hHHh---C-CcEEECCCCHHHHHHHHHHHHcCC
Confidence            998875 6779999999999999    776643211     1222   2 34443  47788888777777654

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.27  E-value=8.3e-11  Score=91.96  Aligned_cols=116  Identities=15%  Similarity=0.119  Sum_probs=80.4

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhc
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT   81 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~   81 (130)
                      ++.++.++.|+.++++.+++++.  ...++.+.++.. ++|+|++.++..++..+++.+|+++.++    |..++|||+|
T Consensus       220 a~~~l~~~~~~~~~vi~~~~~~~--~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~ad~vv~~S----g~~~~EA~a~  292 (365)
T TIGR00236       220 AIREIVEEFEDVQIVYPVHLNPV--VREPLHKHLGDS-KRVHLIEPLEYLDFLNLAANSHLILTDS----GGVQEEAPSL  292 (365)
T ss_pred             HHHHHHHHCCCCEEEEECCCChH--HHHHHHHHhCCC-CCEEEECCCChHHHHHHHHhCCEEEECC----hhHHHHHHHc
Confidence            45666777899998887643222  112234445664 7999999999999999999999998554    4457999999


Q ss_pred             CCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         82 GTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        82 G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      |+|||+.....  +|.  .+. ..|...++..|.++..+...++++|+
T Consensus       293 g~PvI~~~~~~--~~~--e~~-~~g~~~lv~~d~~~i~~ai~~ll~~~  335 (365)
T TIGR00236       293 GKPVLVLRDTT--ERP--ETV-EAGTNKLVGTDKENITKAAKRLLTDP  335 (365)
T ss_pred             CCCEEECCCCC--CCh--HHH-hcCceEEeCCCHHHHHHHHHHHHhCh
Confidence            99999974211  111  122 23544455568899988888888775

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.25  E-value=7.8e-11  Score=94.86  Aligned_cols=114  Identities=15%  Similarity=-0.075  Sum_probs=78.3

Q ss_pred             HHHHHhhCCCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +.++.++  +.+|+++|.+.. ..+.++++.+++   .+++.|.+..+.++...+|+.||+++.|+. +++|++.+|||+
T Consensus       318 ~~~l~~~--~~~lvi~G~g~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma  392 (476)
T cd03791         318 LPELLEL--GGQLVILGSGDPEYEEALRELAARY---PGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMR  392 (476)
T ss_pred             HHHHHHc--CcEEEEEecCCHHHHHHHHHHHHhC---CCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhh
Confidence            4444433  389999996422 245666666665   378988877777777789999999999886 467999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCC------CCcee--cCHHHHHHHHHHhcc
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGC------PELIA--RTHKEYQDIAIRLGT  127 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~------~~~va--~~~~~y~~~a~~l~~  127 (130)
                      ||+|||+.+...+..-+.      .|.      ++++.  .|.+++.+...++++
T Consensus       393 ~G~pvI~~~~gg~~e~v~------~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~  441 (476)
T cd03791         393 YGTVPIVRATGGLADTVI------DYNEDTGEGTGFVFEGYNADALLAALRRALA  441 (476)
T ss_pred             CCCCCEECcCCCccceEe------CCcCCCCCCCeEEeCCCCHHHHHHHHHHHHH
Confidence            999999986543322221      122      45443  467777777766553

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.25  E-value=9.5e-11  Score=92.97  Aligned_cols=115  Identities=14%  Similarity=0.062  Sum_probs=79.3

Q ss_pred             HhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEE
Q psy15363          7 LKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVV   86 (130)
Q Consensus         7 l~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV   86 (130)
                      ++..|+.+++++++++.  +..+++.+..+.. ++|.|+|++  +++..+|+.||+++.   ..+|+|++|||+||+|+|
T Consensus       226 ~~~~~~~~~vvv~G~~~--~l~~~l~~~~~~~-~~v~~~G~~--~~~~~~~~~aDl~I~---k~gg~tl~EA~a~G~PvI  297 (391)
T PRK13608        226 LAKSANAQVVMICGKSK--ELKRSLTAKFKSN-ENVLILGYT--KHMNEWMASSQLMIT---KPGGITISEGLARCIPMI  297 (391)
T ss_pred             HhcCCCceEEEEcCCCH--HHHHHHHHHhccC-CCeEEEecc--chHHHHHHhhhEEEe---CCchHHHHHHHHhCCCEE
Confidence            44557888877764322  1122233334444 689999998  568889999999984   247889999999999999


Q ss_pred             ecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         87 TLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        87 ~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      +...........+.++...|.. +...|.+++.+...+|++|++
T Consensus       298 ~~~~~pgqe~~N~~~~~~~G~g-~~~~~~~~l~~~i~~ll~~~~  340 (391)
T PRK13608        298 FLNPAPGQELENALYFEEKGFG-KIADTPEEAIKIVASLTNGNE  340 (391)
T ss_pred             ECCCCCCcchhHHHHHHhCCcE-EEeCCHHHHHHHHHHHhcCHH
Confidence            9843222233445566666664 456789999998888888763

>PRK14099 glycogen synthase; Provisional

Probab=99.23  E-value=1e-10  Score=95.52  Aligned_cols=120  Identities=22%  Similarity=0.049  Sum_probs=74.3

Q ss_pred             HHHHHhhCCCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCE-EEecCCCHHHHHHhh-ccccEEEcCCC-CCCchHHHHH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRI-LFSNVAAKEEHVRRG-QLADVCLDTPL-CNGHTTSMDV   78 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv-~f~g~~~~~~~~~~~-~~~Dv~l~~~~-~~~g~~~lEA   78 (130)
                      ++++++  ++.+|+++|++.+ .++.+++++++++   +++ .|+|+  .+++..+| +.||+|+.||. +++|++.+||
T Consensus       317 ~~~l~~--~~~~lvivG~G~~~~~~~l~~l~~~~~---~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEA  389 (485)
T PRK14099        317 LPTLLG--EGAQLALLGSGDAELEARFRAAAQAYP---GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCA  389 (485)
T ss_pred             HHHHHh--cCcEEEEEecCCHHHHHHHHHHHHHCC---CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHH
Confidence            344443  3689999996322 3567888877764   455 78897  46777776 56999999886 5679999999


Q ss_pred             HhcCCcEEecCCCchhhhhHH--HHHHhcC-CCCcee--cCHHHHHHHHHH---hccCC
Q psy15363         79 LWTGTPVVTLPGETLASRVAA--SQLATLG-CPELIA--RTHKEYQDIAIR---LGTDR  129 (130)
Q Consensus        79 la~G~PvV~~~g~~~~~r~~~--~~l~~~g-~~~~va--~~~~~y~~~a~~---l~~d~  129 (130)
                      |+||+|+|+.+......-+..  ......| -.+++.  .|.+++.+...+   +.+|+
T Consensus       390 ma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~  448 (485)
T PRK14099        390 LRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADP  448 (485)
T ss_pred             HHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCH
Confidence            999966555432222111110  0000001 235553  477777776654   66664

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.23  E-value=1.2e-10  Score=91.84  Aligned_cols=108  Identities=12%  Similarity=0.058  Sum_probs=71.7

Q ss_pred             CCCcE-EEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         10 VPNSI-LWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        10 ~P~a~-l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      .|+.+ ++++|. +.   .+++.+++.... .+|+|+|+++  ++..+|+.||+++.+   ++|.|++|||+||+|+|++
T Consensus       239 ~~~~~~~vi~G~-~~---~~~~~L~~~~~~-~~v~~~G~~~--~~~~l~~aaDv~V~~---~g~~ti~EAma~g~PvI~~  308 (382)
T PLN02605        239 KPIGQVVVICGR-NK---KLQSKLESRDWK-IPVKVRGFVT--NMEEWMGACDCIITK---AGPGTIAEALIRGLPIILN  308 (382)
T ss_pred             CCCceEEEEECC-CH---HHHHHHHhhccc-CCeEEEeccc--cHHHHHHhCCEEEEC---CCcchHHHHHHcCCCEEEe
Confidence            36665 455554 32   223333333333 6899999995  688999999999953   3678999999999999998


Q ss_pred             CCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccC
Q psy15363         89 PGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        89 ~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d  128 (130)
                      +--.......+..+...|.. +...|.+++.+...+|++|
T Consensus       309 ~~~pgqe~gn~~~i~~~g~g-~~~~~~~~la~~i~~ll~~  347 (382)
T PLN02605        309 GYIPGQEEGNVPYVVDNGFG-AFSESPKEIARIVAEWFGD  347 (382)
T ss_pred             cCCCccchhhHHHHHhCCce-eecCCHHHHHHHHHHHHcC
Confidence            63111111223344444553 3458999999999998877

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.22  E-value=9.3e-11  Score=91.74  Aligned_cols=117  Identities=16%  Similarity=0.185  Sum_probs=78.6

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHc-CCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQAL-GLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~-g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~   81 (130)
                      +.++.++.|+.+++++|+++..++.+++..+++ |+.   +.+..    .++..+|+.||+++.++    |++++|||++
T Consensus       211 ~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~---v~~~~----~~~~~~~~~aDl~v~~s----G~~~lEa~a~  279 (380)
T PRK00025        211 AQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLE---VTLLD----GQKREAMAAADAALAAS----GTVTLELALL  279 (380)
T ss_pred             HHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCC---eEEEc----ccHHHHHHhCCEEEECc----cHHHHHHHHh
Confidence            445667789999999875345567788887777 653   55543    36788999999999654    7888899999


Q ss_pred             CCcEEecCCCchhhhhHHHHH---HhcC----------CCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         82 GTPVVTLPGETLASRVAASQL---ATLG----------CPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        82 G~PvV~~~g~~~~~r~~~~~l---~~~g----------~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      |+|+|+.+.........+..+   +..+          .++++.  .|.+++.+...++++|++
T Consensus       280 G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~  343 (380)
T PRK00025        280 KVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA  343 (380)
T ss_pred             CCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence            999998754332222111111   1112          233443  367889999999988874

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.20  E-value=2e-10  Score=88.53  Aligned_cols=109  Identities=15%  Similarity=0.139  Sum_probs=77.4

Q ss_pred             CCcEEE-EeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecC
Q psy15363         11 PNSILW-LLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP   89 (130)
Q Consensus        11 P~a~l~-i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~   89 (130)
                      ++.+++ ++|. + .++.+++.++++  . ++|.|.|++  +++..+|+.||+++.++   ++++++|||++|+|||+.+
T Consensus       210 ~~~~~~~i~G~-g-~~~~l~~~~~~~--~-~~v~~~g~~--~~~~~~l~~ad~~v~~s---g~~t~~Eam~~G~Pvv~~~  279 (350)
T cd03785         210 KRLQVIHQTGK-G-DLEEVKKAYEEL--G-VNYEVFPFI--DDMAAAYAAADLVISRA---GASTVAELAALGLPAILIP  279 (350)
T ss_pred             cCeEEEEEcCC-c-cHHHHHHHHhcc--C-CCeEEeehh--hhHHHHHHhcCEEEECC---CHhHHHHHHHhCCCEEEee
Confidence            455544 5564 4 567788888776  3 799999998  77888999999999533   4788999999999999975


Q ss_pred             CCc---hhhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhccCC
Q psy15363         90 GET---LASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR  129 (130)
Q Consensus        90 g~~---~~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~d~  129 (130)
                      -..   -.....+..+...|..-.+..   |.+++.+...++++|+
T Consensus       280 ~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~  325 (350)
T cd03785         280 LPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDP  325 (350)
T ss_pred             cCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence            321   111122344555566555543   7899999988888775

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK10125 putative glycosyl transferase; Provisional

Probab=99.20  E-value=7.6e-11  Score=94.22  Aligned_cols=68  Identities=12%  Similarity=0.007  Sum_probs=53.2

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCC-CHHHHHHhhccccEEEcCCC-CCCchHHHHHHhcCCcEEec
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVA-AKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~-~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G~PvV~~   88 (130)
                      ++.+|+++|. ++...            .+++.++|.. +.+++..+|+.+|+|+.|+. +++|++++|||+||+|||++
T Consensus       270 ~~~~L~ivG~-g~~~~------------~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat  336 (405)
T PRK10125        270 DKIELHTFGK-FSPFT------------AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIAT  336 (405)
T ss_pred             CCeEEEEEcC-CCccc------------ccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEe
Confidence            4667777775 22110            1578888887 46789999999999988875 57899999999999999999


Q ss_pred             CCC
Q psy15363         89 PGE   91 (130)
Q Consensus        89 ~g~   91 (130)
                      +-.
T Consensus       337 ~~g  339 (405)
T PRK10125        337 HSD  339 (405)
T ss_pred             CCC
Confidence            754

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.12  E-value=1.2e-09  Score=80.36  Aligned_cols=117  Identities=21%  Similarity=0.178  Sum_probs=84.4

Q ss_pred             HHHhhCCCcEEEEeecCccc-HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhcC
Q psy15363          5 FVLKAVPNSILWLLKFPAVG-EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTG   82 (130)
Q Consensus         5 ~il~~~P~a~l~i~g~~~~~-~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G   82 (130)
                      .+.+..|+..++++|. ++. .+.+.+.+++.+.. +++.|.|.++.+++..+++.+|+++.|+. ++.|.+++|||++|
T Consensus       223 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g  300 (381)
T COG0438         223 KLKKRGPDIKLVIVGD-GPERREELEKLAKKLGLE-DNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG  300 (381)
T ss_pred             HhhhhcCCeEEEEEcC-CCccHHHHHHHHHHhCCC-CcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence            3444445578999996 444 35677788888875 89999999997788888999999998876 57899999999999


Q ss_pred             CcEEecCCCchhhhhHHHHHHhcCCCC-ceec-CHHHHHHHHHHhccCC
Q psy15363         83 TPVVTLPGETLASRVAASQLATLGCPE-LIAR-THKEYQDIAIRLGTDR  129 (130)
Q Consensus        83 ~PvV~~~g~~~~~r~~~~~l~~~g~~~-~va~-~~~~y~~~a~~l~~d~  129 (130)
                      +|||+........-+     ...+ .+ ++.. +.+++.+....+.+++
T Consensus       301 ~pvi~~~~~~~~e~~-----~~~~-~g~~~~~~~~~~~~~~i~~~~~~~  343 (381)
T COG0438         301 TPVIASDVGGIPEVV-----EDGE-TGLLVPPGDVEELADALEQLLEDP  343 (381)
T ss_pred             CcEEECCCCChHHHh-----cCCC-ceEecCCCCHHHHHHHHHHHhcCH
Confidence            999998655332222     2211 13 2333 4788888888777653

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.11  E-value=1.1e-09  Score=84.97  Aligned_cols=109  Identities=13%  Similarity=0.069  Sum_probs=78.9

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCC
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~   91 (130)
                      +..+++.|+ +..++.+++.+++++...++|.|++.....++..+|+.||+++.++.   | ...||+++|+|+|+....
T Consensus       231 ~~~vi~~~~-~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg---g-i~~Ea~~~g~PvI~~~~~  305 (363)
T cd03786         231 DVPVVFPNH-PRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG---G-IQEEASFLGVPVLNLRDR  305 (363)
T ss_pred             CCEEEEECC-CChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc---c-HHhhhhhcCCCEEeeCCC
Confidence            455555553 45678889888888873379999999888899999999999986653   3 579999999999998643


Q ss_pred             chhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         92 TLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        92 ~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      .- .+    .+-..|..-++.++.++..+...++++|++
T Consensus       306 ~~-~~----~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~  339 (363)
T cd03786         306 TE-RP----ETVESGTNVLVGTDPEAILAAIEKLLSDEF  339 (363)
T ss_pred             Cc-cc----hhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence            11 11    111235544454578899988888888763

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.06  E-value=1.2e-09  Score=84.08  Aligned_cols=110  Identities=17%  Similarity=0.204  Sum_probs=74.5

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCC
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~   91 (130)
                      +.++++++++ ...+.+++.++++++. +++.|..    .++..+|+.||+++.+   +++++++|||++|+|+|+.+-.
T Consensus       209 ~~~~~~~~g~-~~~~~l~~~~~~~~l~-~~v~~~~----~~~~~~l~~ad~~v~~---~g~~~l~Ea~~~g~Pvv~~~~~  279 (348)
T TIGR01133       209 GIQIVHQTGK-NDLEKVKNVYQELGIE-AIVTFID----ENMAAAYAAADLVISR---AGASTVAELAAAGVPAILIPYP  279 (348)
T ss_pred             CcEEEEECCc-chHHHHHHHHhhCCce-EEecCcc----cCHHHHHHhCCEEEEC---CChhHHHHHHHcCCCEEEeeCC
Confidence            4455455433 3457888888888885 6777762    2677889999999853   2478999999999999987432


Q ss_pred             ch--hhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhccCCC
Q psy15363         92 TL--ASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDRD  130 (130)
Q Consensus        92 ~~--~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~d~e  130 (130)
                      ..  ..+..+.++...+..-++..   +.+++.+...++++|++
T Consensus       280 ~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~  323 (348)
T TIGR01133       280 YAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPA  323 (348)
T ss_pred             CCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHH
Confidence            11  12233445655454434432   48999999999988764

RL J Bacteriol 1993 Mar;175(6):1841-3

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.04  E-value=2.5e-09  Score=83.14  Aligned_cols=107  Identities=15%  Similarity=0.193  Sum_probs=74.6

Q ss_pred             cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCc
Q psy15363         13 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET   92 (130)
Q Consensus        13 a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~   92 (130)
                      .+++++|. ++ .+.+++..+ +|+  + |.|.|++  +++..+|..||+++.++   ++++++|||++|+|||+.+...
T Consensus       214 ~~~~~~G~-g~-~~~~~~~~~-~~~--~-v~~~g~~--~~~~~~~~~~d~~i~~~---g~~~~~Ea~~~g~Pvv~~~~~~  282 (357)
T PRK00726        214 QVIHQTGK-GD-LEEVRAAYA-AGI--N-AEVVPFI--DDMAAAYAAADLVICRA---GASTVAELAAAGLPAILVPLPH  282 (357)
T ss_pred             EEEEEcCC-Cc-HHHHHHHhh-cCC--c-EEEeehH--hhHHHHHHhCCEEEECC---CHHHHHHHHHhCCCEEEecCCC
Confidence            45667775 44 355555555 776  3 9999998  67888999999998543   4688999999999999986321


Q ss_pred             ---hhhhhHHHHHHhcCCCCceec-C--HHHHHHHHHHhccCCC
Q psy15363         93 ---LASRVAASQLATLGCPELIAR-T--HKEYQDIAIRLGTDRD  130 (130)
Q Consensus        93 ---~~~r~~~~~l~~~g~~~~va~-~--~~~y~~~a~~l~~d~e  130 (130)
                         ......+..+...|..-++.. +  .+++.+...++++|++
T Consensus       283 ~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~  326 (357)
T PRK00726        283 AADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPE  326 (357)
T ss_pred             CCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHH
Confidence               112223455555666444542 3  8899999999988763

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.01  E-value=6.4e-09  Score=82.63  Aligned_cols=117  Identities=15%  Similarity=0.083  Sum_probs=79.9

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGT   83 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~   83 (130)
                      .++.++.|+.++++.+.++..++.+++..++++.. .+|.+.+.    +...+|+.||+++.++    |++++|+|++|+
T Consensus       217 ~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~----~~~~~l~aADl~V~~S----Gt~tlEa~a~G~  287 (385)
T TIGR00215       217 QLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPD-LQLHLIDG----DARKAMFAADAALLAS----GTAALEAALIKT  287 (385)
T ss_pred             HHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCC-CcEEEECc----hHHHHHHhCCEEeecC----CHHHHHHHHcCC
Confidence            55667789988877654445667777777777765 68877653    3446889999999666    778889999999


Q ss_pred             cEEecCCCchhhhhHHHH-------------HHhcCCCCceec--CHHHHHHHHHHhccCC
Q psy15363         84 PVVTLPGETLASRVAASQ-------------LATLGCPELIAR--THKEYQDIAIRLGTDR  129 (130)
Q Consensus        84 PvV~~~g~~~~~r~~~~~-------------l~~~g~~~~va~--~~~~y~~~a~~l~~d~  129 (130)
                      |+|....-++.....+..             .+.--.+|++.+  +++...+.+.+|++|+
T Consensus       288 P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~  348 (385)
T TIGR00215       288 PMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG  348 (385)
T ss_pred             CEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence            988875544444332222             111223455533  5778888888888886

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.00  E-value=1.4e-09  Score=93.56  Aligned_cols=117  Identities=15%  Similarity=0.051  Sum_probs=78.7

Q ss_pred             hHHHHHhhCCCcE----EEEeecC----cccHHHHHHHHHHcC--CCCCC--------EEEe-cCCCHHHHHHhhccccE
Q psy15363          2 SDIFVLKAVPNSI----LWLLKFP----AVGEANIQATAQALG--LDQHR--------ILFS-NVAAKEEHVRRGQLADV   62 (130)
Q Consensus         2 ~w~~il~~~P~a~----l~i~g~~----~~~~~~l~~~~~~~g--~~~~r--------v~f~-g~~~~~~~~~~~~~~Dv   62 (130)
                      +|.++++++|+.+    |+.++.+    ++..+.+++.+++++  ++ ++        |+++ +.++.+++.++|+.||+
T Consensus       300 Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In-~~~g~~~~~pv~~l~~~v~~~el~aly~~ADv  378 (797)
T PLN03063        300 AFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRIN-GRFGSVSSVPIHHLDCSVDFNYLCALYAITDV  378 (797)
T ss_pred             HHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhh-cccccCCCceeEEecCCCCHHHHHHHHHhCCE
Confidence            6888999999864    4434422    234556777777664  43 32        3333 47899999999999999


Q ss_pred             EEcCCC-CCCchHHHHHHhcCCc----EEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhcc
Q psy15363         63 CLDTPL-CNGHTTSMDVLWTGTP----VVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT  127 (130)
Q Consensus        63 ~l~~~~-~~~g~~~lEAla~G~P----vV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~  127 (130)
                      |+.|+. ++.+++++|||+||+|    +|...-...     +..   +|...++.  .|.++..+...++++
T Consensus       379 fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~-----~~~---l~~~allVnP~D~~~lA~AI~~aL~  442 (797)
T PLN03063        379 MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGA-----GQS---LGAGALLVNPWNITEVSSAIKEALN  442 (797)
T ss_pred             EEeCccccccCcchhhHheeecCCCCCEEeeCCcCc-----hhh---hcCCeEEECCCCHHHHHHHHHHHHh
Confidence            998875 6789999999999998    666532211     111   23344443  477777777777666

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=98.99  E-value=2.2e-09  Score=88.48  Aligned_cols=118  Identities=12%  Similarity=0.085  Sum_probs=93.0

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc--cHHHHHHHHHHcCCC----------------------------CCCEEEecCCCHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV--GEANIQATAQALGLD----------------------------QHRILFSNVAAKE   51 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~--~~~~l~~~~~~~g~~----------------------------~~rv~f~g~~~~~   51 (130)
                      ++.++++++|++.|.+.|.+..  ..+.+++.+++++.+                            .++|.|.|..+..
T Consensus       341 av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~  420 (519)
T TIGR03713       341 QLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEE  420 (519)
T ss_pred             HHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEecCCHH
Confidence            5788999999999999996422  235676776666554                            1699999999888


Q ss_pred             HHHHhhccccEEEcCCCC-CCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         52 EHVRRGQLADVCLDTPLC-NGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        52 ~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      ++...|..+.++++++.. +++ +.+||++.|+|+|-. |.        +-+-..|.++++..+.+++.+.+..++.|+
T Consensus       421 dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqIny-g~--------~~~V~d~~NG~li~d~~~l~~al~~~L~~~  489 (519)
T TIGR03713       421 DLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQINK-VE--------TDYVEHNKNGYIIDDISELLKALDYYLDNL  489 (519)
T ss_pred             HHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCeeec-CC--------ceeeEcCCCcEEeCCHHHHHHHHHHHHhCH
Confidence            999999999999999864 567 999999999999922 11        112234888888899999999999988875

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>KOG0853|consensus

Probab=98.92  E-value=8e-09  Score=84.14  Aligned_cols=114  Identities=16%  Similarity=0.127  Sum_probs=82.3

Q ss_pred             CCcEEEEeecCcc---------cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC-CCCCchHHHHHHh
Q psy15363         11 PNSILWLLKFPAV---------GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLW   80 (130)
Q Consensus        11 P~a~l~i~g~~~~---------~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~~~~g~~~lEAla   80 (130)
                      ++-++.++|+.|.         ....+++++++.++..+.|.|+...++.+-..+++.+...+.+. .+.+|.|++|||+
T Consensus       308 ~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa  387 (495)
T KOG0853|consen  308 SSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMA  387 (495)
T ss_pred             CceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHh
Confidence            5677878873321         13467788999999658899999998877777777888877654 4679999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCcee-cCHH---HHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIA-RTHK---EYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va-~~~~---~y~~~a~~l~~d~e  130 (130)
                      ||+|||++.......-+-      .|.++|.. .+.+   .+.+...++.+||+
T Consensus       388 ~glPvvAt~~GGP~EiV~------~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~  435 (495)
T KOG0853|consen  388 CGLPVVATNNGGPAEIVV------HGVTGLLIDPGQEAVAELADALLKLRRDPE  435 (495)
T ss_pred             cCCCEEEecCCCceEEEE------cCCcceeeCCchHHHHHHHHHHHHHhcCHH
Confidence            999999986543333221      26667544 4554   48888888888874

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=98.91  E-value=1.7e-09  Score=92.08  Aligned_cols=118  Identities=19%  Similarity=0.116  Sum_probs=78.1

Q ss_pred             hHHHHHhhCCC----cEEEEeecC---c-ccHHHHHHHHHHc--------CCC-C-CCEEEecCCCHHHHHHhhccccEE
Q psy15363          2 SDIFVLKAVPN----SILWLLKFP---A-VGEANIQATAQAL--------GLD-Q-HRILFSNVAAKEEHVRRGQLADVC   63 (130)
Q Consensus         2 ~w~~il~~~P~----a~l~i~g~~---~-~~~~~l~~~~~~~--------g~~-~-~rv~f~g~~~~~~~~~~~~~~Dv~   63 (130)
                      +|.++++++|+    .+|+++|.+   + +..+.+++.++++        |-. . ..+.|.+.++++++.++|+.||+|
T Consensus       286 A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~  365 (726)
T PRK14501        286 AFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVA  365 (726)
T ss_pred             HHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEE
Confidence            67889999996    688888732   1 2234455544432        211 1 135677899999999999999999


Q ss_pred             EcCCC-CCCchHHHHHHhc-----CCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         64 LDTPL-CNGHTTSMDVLWT-----GTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        64 l~~~~-~~~g~~~lEAla~-----G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +.|+. ++.+++++|||+|     |+||++.....      +..+.    ..++.  .|.+++.+...++++++
T Consensus       366 v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~------~~~l~----~~llv~P~d~~~la~ai~~~l~~~  429 (726)
T PRK14501        366 LVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGA------AAELA----EALLVNPNDIEGIAAAIKRALEMP  429 (726)
T ss_pred             EecccccccCcccceEEEEcCCCCceEEEecccch------hHHhC----cCeEECCCCHHHHHHHHHHHHcCC
Confidence            98875 5779999999999     55666653221      11111    23332  47778887777777654

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=98.87  E-value=2e-08  Score=81.25  Aligned_cols=115  Identities=10%  Similarity=0.058  Sum_probs=84.4

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla   80 (130)
                      .+.++.++.|++.|-| |-+....+.|+++ .++  + +-+.|.|..+ .++..+|..||+|||++.. +.+.++.||+.
T Consensus       296 ~i~~Lv~~lPd~~f~I-ga~te~s~kL~~L-~~y--~-nvvly~~~~~-~~l~~ly~~~dlyLdin~~e~~~~al~eA~~  369 (438)
T TIGR02919       296 HLEEIVQALPDYHFHI-AALTEMSSKLMSL-DKY--D-NVKLYPNITT-QKIQELYQTCDIYLDINHGNEILNAVRRAFE  369 (438)
T ss_pred             HHHHHHHhCCCcEEEE-EecCcccHHHHHH-Hhc--C-CcEEECCcCh-HHHHHHHHhccEEEEccccccHHHHHHHHHH
Confidence            5788999999999998 6433335788888 666  3 5666666554 4577899999999999874 67999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCce-ecCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELI-ARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~v-a~~~~~y~~~a~~l~~d~  129 (130)
                      .|+||++.+..........       -+.++ ..+.++++++..++++|+
T Consensus       370 ~G~pI~afd~t~~~~~~i~-------~g~l~~~~~~~~m~~~i~~lL~d~  412 (438)
T TIGR02919       370 YNLLILGFEETAHNRDFIA-------SENIFEHNEVDQLISKLKDLLNDP  412 (438)
T ss_pred             cCCcEEEEecccCCccccc-------CCceecCCCHHHHHHHHHHHhcCH
Confidence            9999999875432221110       02233 367899999999998886

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=98.84  E-value=2.9e-08  Score=77.23  Aligned_cols=99  Identities=13%  Similarity=0.027  Sum_probs=70.5

Q ss_pred             hCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC------------CCCCchHHH
Q psy15363          9 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP------------LCNGHTTSM   76 (130)
Q Consensus         9 ~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~------------~~~~g~~~l   76 (130)
                      ..|+.+|+++|. |+.++         ... ++|.|.|+++.+++..+|+. |+.|-+.            .++.+..+.
T Consensus       187 ~~~~~~l~i~G~-g~~~~---------~~~-~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~  254 (333)
T PRK09814        187 WSQGIKLTVFGP-NPEDL---------ENS-ANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLS  254 (333)
T ss_pred             cCCCCeEEEECC-Ccccc---------ccC-CCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHH
Confidence            357899999996 45432         233 79999999999999998887 6544221            345678899


Q ss_pred             HHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHh
Q psy15363         77 DVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL  125 (130)
Q Consensus        77 EAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l  125 (130)
                      ++|+||+|||+.+.....     .++.. +-.+++.++.++..+...++
T Consensus       255 ~ymA~G~PVI~~~~~~~~-----~~V~~-~~~G~~v~~~~el~~~l~~~  297 (333)
T PRK09814        255 LYLAAGLPVIVWSKAAIA-----DFIVE-NGLGFVVDSLEELPEIIDNI  297 (333)
T ss_pred             HHHHCCCCEEECCCccHH-----HHHHh-CCceEEeCCHHHHHHHHHhc
Confidence            999999999998654332     33333 44466667888877777664

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=98.64  E-value=4.5e-07  Score=74.35  Aligned_cols=88  Identities=19%  Similarity=0.115  Sum_probs=66.9

Q ss_pred             ChHHHHHhhCCC----cEEEEeecCc----cc----HHHHHHHHHHc-------CCCCCCEEEecCCCHHHHHHhhcccc
Q psy15363          1 MSDIFVLKAVPN----SILWLLKFPA----VG----EANIQATAQAL-------GLDQHRILFSNVAAKEEHVRRGQLAD   61 (130)
Q Consensus         1 ~~w~~il~~~P~----a~l~i~g~~~----~~----~~~l~~~~~~~-------g~~~~rv~f~g~~~~~~~~~~~~~~D   61 (130)
                      ++|.++|+++|+    ++|+.+|.+.    +.    +..+++++.+.       |.. .-+.|.+.++.+++.++|+.||
T Consensus       305 ~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~-pv~~~~~~v~~~el~alYr~AD  383 (487)
T TIGR02398       305 NAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWT-PLQFFTRSLPYEEVSAWFAMAD  383 (487)
T ss_pred             HHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCc-cEEEEcCCCCHHHHHHHHHhCC
Confidence            368899999996    6899998642    11    23444444432       333 4578889999999999999999


Q ss_pred             EEEcCCC-CCCchHHHHHHhcCC----cEEecC
Q psy15363         62 VCLDTPL-CNGHTTSMDVLWTGT----PVVTLP   89 (130)
Q Consensus        62 v~l~~~~-~~~g~~~lEAla~G~----PvV~~~   89 (130)
                      |++.|+- .+.+++..|+++|+.    |+|...
T Consensus       384 V~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSe  416 (487)
T TIGR02398       384 VMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSE  416 (487)
T ss_pred             EEEECccccccCcchhhHHhhhcCCCCCEEEec
Confidence            9988774 677999999999988    777654

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>KOG1387|consensus

Probab=98.62  E-value=3.3e-07  Score=72.01  Aligned_cols=114  Identities=14%  Similarity=0.106  Sum_probs=85.9

Q ss_pred             CCCcEEEEeecC--cccH---HHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhcCC
Q psy15363         10 VPNSILWLLKFP--AVGE---ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTGT   83 (130)
Q Consensus        10 ~P~a~l~i~g~~--~~~~---~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G~   83 (130)
                      .++.+|+++|+-  ..++   ..|+.+++++.++ ++|.|.-.+|.+++..+|+-|.+-+.+.. +.+|+++.|+||+|+
T Consensus       303 ~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~-~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl  381 (465)
T KOG1387|consen  303 VSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIP-KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL  381 (465)
T ss_pred             cCCceEEEEeccCChhhHHHHHHHHHHHHhcCCc-cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc
Confidence            366899999952  2233   3577889999998 88999999999999999999999999875 678999999999996


Q ss_pred             cEEecCCCchhhhhHHHHHHhcCC-CCceecCHHHHHHHHHHhcc
Q psy15363         84 PVVTLPGETLASRVAASQLATLGC-PELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        84 PvV~~~g~~~~~r~~~~~l~~~g~-~~~va~~~~~y~~~a~~l~~  127 (130)
                      =.|+.++....-.+.   ....|- .++.+.+.+||++..+++..
T Consensus       382 Ipi~h~SgGP~lDIV---~~~~G~~tGFla~t~~EYaE~iLkIv~  423 (465)
T KOG1387|consen  382 IPIVHNSGGPLLDIV---TPWDGETTGFLAPTDEEYAEAILKIVK  423 (465)
T ss_pred             eEEEeCCCCCceeee---eccCCccceeecCChHHHHHHHHHHHH
Confidence            555554332211111   112343 36999999999998887765

>TIGR03492 conserved hypothetical protein

Probab=98.33  E-value=9.5e-06  Score=64.92  Aligned_cols=111  Identities=15%  Similarity=0.177  Sum_probs=73.0

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCCC-------------CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHH
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLDQ-------------HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMD   77 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~~-------------~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lE   77 (130)
                      |+..+++.-.++...+.+++...+.|+..             +++.+....  .++..+|+.||+++..    .|+++.|
T Consensus       237 ~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~ADlvI~r----SGt~T~E  310 (396)
T TIGR03492       237 QPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGR--GAFAEILHWADLGIAM----AGTATEQ  310 (396)
T ss_pred             CCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEech--HhHHHHHHhCCEEEEC----cCHHHHH
Confidence            67777665433456677887777767642             135555443  5678899999999944    5577799


Q ss_pred             HHhcCCcEEecCCCchhhhhHHHHHHhc----CCCCc-eecCHHHHHHHHHHhccCC
Q psy15363         78 VLWTGTPVVTLPGETLASRVAASQLATL----GCPEL-IARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        78 Ala~G~PvV~~~g~~~~~r~~~~~l~~~----g~~~~-va~~~~~y~~~a~~l~~d~  129 (130)
                      ++++|+|+|..+.+.+.  ..+.++...    |-... ...+.+...+...++.+|+
T Consensus       311 ~a~lg~P~Ilip~~~~q--~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~  365 (396)
T TIGR03492       311 AVGLGKPVIQLPGKGPQ--FTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP  365 (396)
T ss_pred             HHHhCCCEEEEeCCCCH--HHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence            99999999999854332  244444432    32222 3355677888888887775

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=98.30  E-value=1.5e-06  Score=72.31  Aligned_cols=68  Identities=12%  Similarity=0.027  Sum_probs=48.4

Q ss_pred             HHHHHHHHHcCCC---CCC--EEEecCC-C------HHHHHHhhccccEEEcCCCC-CCchHHHHHHhcCCcEEecCCCc
Q psy15363         26 ANIQATAQALGLD---QHR--ILFSNVA-A------KEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWTGTPVVTLPGET   92 (130)
Q Consensus        26 ~~l~~~~~~~g~~---~~r--v~f~g~~-~------~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~G~PvV~~~g~~   92 (130)
                      +.+-..+++.++.   .||  |+|.+.. +      ..++..+|+.||+|+.|+.+ ++|.+.+|||+||+|||+++...
T Consensus       429 D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~g  508 (590)
T cd03793         429 DPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSG  508 (590)
T ss_pred             CHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcc
Confidence            3455556665554   144  6665542 1      23466778999999998864 67999999999999999998764


Q ss_pred             h
Q psy15363         93 L   93 (130)
Q Consensus        93 ~   93 (130)
                      +
T Consensus       509 f  509 (590)
T cd03793         509 F  509 (590)
T ss_pred             h
Confidence            4

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=98.17  E-value=2.3e-06  Score=54.40  Aligned_cols=63  Identities=14%  Similarity=0.146  Sum_probs=44.8

Q ss_pred             EEEcCCCC-CCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         62 VCLDTPLC-NGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        62 v~l~~~~~-~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      |+|.+... +.+..++|+|+||+|||+.....+..     ++ ..|...+..+|++++.++...+++||+
T Consensus         1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~-----~~-~~~~~~~~~~~~~el~~~i~~ll~~~~   64 (92)
T PF13524_consen    1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLRE-----IF-EDGEHIITYNDPEELAEKIEYLLENPE   64 (92)
T ss_pred             CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHH-----Hc-CCCCeEEEECCHHHHHHHHHHHHCCHH
Confidence            35666543 45789999999999999976532211     11 124455667899999999999999874

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=98.10  E-value=4.4e-05  Score=60.21  Aligned_cols=82  Identities=16%  Similarity=0.123  Sum_probs=56.4

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|.+.+++|..++   +..||+++   ..+|.+|+.||+++|+|+|..+-..- ....+..+...|..-.+..   +.+
T Consensus       288 ~~v~~~~~~p~~~l---l~~~d~~I---~hgG~~t~~eal~~GvP~v~~P~~~d-Q~~~a~~~~~~G~g~~l~~~~~~~~  360 (401)
T cd03784         288 DNVRVVDFVPHDWL---LPRCAAVV---HHGGAGTTAAALRAGVPQLVVPFFGD-QPFWAARVAELGAGPALDPRELTAE  360 (401)
T ss_pred             CceEEeCCCCHHHH---hhhhheee---ecCCchhHHHHHHcCCCEEeeCCCCC-cHHHHHHHHHCCCCCCCCcccCCHH
Confidence            68888999886554   66799998   34566899999999999999865322 2234555666776654432   566


Q ss_pred             HHHHHHHHhccC
Q psy15363        117 EYQDIAIRLGTD  128 (130)
Q Consensus       117 ~y~~~a~~l~~d  128 (130)
                      +..+...++++|
T Consensus       361 ~l~~al~~~l~~  372 (401)
T cd03784         361 RLAAALRRLLDP  372 (401)
T ss_pred             HHHHHHHHHhCH
Confidence            666666665543

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=98.08  E-value=1.9e-05  Score=60.25  Aligned_cols=64  Identities=14%  Similarity=0.110  Sum_probs=47.2

Q ss_pred             EEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecC
Q psy15363         16 WLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP   89 (130)
Q Consensus        16 ~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~   89 (130)
                      +++|.+.+..+.+++..+..    .++.+.+++  +++..+|..||+++.    .+|.|+.|++++|+|+|+.+
T Consensus       204 vv~G~~~~~~~~l~~~~~~~----~~i~~~~~~--~~m~~lm~~aDl~Is----~~G~T~~E~~a~g~P~i~i~  267 (279)
T TIGR03590       204 LVTGSSNPNLDELKKFAKEY----PNIILFIDV--ENMAELMNEADLAIG----AAGSTSWERCCLGLPSLAIC  267 (279)
T ss_pred             EEECCCCcCHHHHHHHHHhC----CCEEEEeCH--HHHHHHHHHCCEEEE----CCchHHHHHHHcCCCEEEEE
Confidence            34554334455666665542    478888777  568888999999994    46699999999999999874

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=98.08  E-value=6.1e-05  Score=59.50  Aligned_cols=83  Identities=19%  Similarity=0.323  Sum_probs=58.3

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|.+.+++|..+   ++..||+++.   .+|..|++||+++|+|+|+.+...- ...-+..+...|....+..   +.+
T Consensus       275 ~~v~~~~~~p~~~---ll~~~~~~I~---hgG~~t~~Eal~~G~P~v~~p~~~d-q~~~a~~l~~~g~g~~l~~~~~~~~  347 (392)
T TIGR01426       275 PNVEVRQWVPQLE---ILKKADAFIT---HGGMNSTMEALFNGVPMVAVPQGAD-QPMTARRIAELGLGRHLPPEEVTAE  347 (392)
T ss_pred             CCeEEeCCCCHHH---HHhhCCEEEE---CCCchHHHHHHHhCCCEEecCCccc-HHHHHHHHHHCCCEEEeccccCCHH
Confidence            7899999998754   4678999982   3455689999999999999875433 2234455566677654432   456


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...++++|+
T Consensus       348 ~l~~ai~~~l~~~  360 (392)
T TIGR01426       348 KLREAVLAVLSDP  360 (392)
T ss_pred             HHHHHHHHHhcCH
Confidence            7777777777765

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=98.06  E-value=3.1e-05  Score=67.85  Aligned_cols=86  Identities=15%  Similarity=0.066  Sum_probs=58.0

Q ss_pred             hHHHHHhhCCCcE--EEEe--ecC----cccHHHHHHHH--------HHcCCC-CCCEEEec-CCCHHHHHHhhccccEE
Q psy15363          2 SDIFVLKAVPNSI--LWLL--KFP----AVGEANIQATA--------QALGLD-QHRILFSN-VAAKEEHVRRGQLADVC   63 (130)
Q Consensus         2 ~w~~il~~~P~a~--l~i~--g~~----~~~~~~l~~~~--------~~~g~~-~~rv~f~g-~~~~~~~~~~~~~~Dv~   63 (130)
                      +|.+.|+++|+.+  ++++  ..+    .+..+.+++.+        .++|-. ..-|+++. .++.+++.++|+.||||
T Consensus       384 AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~  463 (934)
T PLN03064        384 AFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVA  463 (934)
T ss_pred             HHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEE
Confidence            6888999999854  5554  211    22333444333        233321 12366554 47899999999999999


Q ss_pred             EcCC-CCCCchHHHHHHhc-----CCcEEe
Q psy15363         64 LDTP-LCNGHTTSMDVLWT-----GTPVVT   87 (130)
Q Consensus        64 l~~~-~~~~g~~~lEAla~-----G~PvV~   87 (130)
                      |.|+ .++.+++..|+|+|     |++|+.
T Consensus       464 lvTslrDGmNLva~Eyva~~~~~~GvLILS  493 (934)
T PLN03064        464 LVTSLRDGMNLVSYEFVACQDSKKGVLILS  493 (934)
T ss_pred             EeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence            9887 46779999999999     666664

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=98.03  E-value=7.4e-05  Score=59.24  Aligned_cols=97  Identities=18%  Similarity=0.253  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCch---hhhhHHHH
Q psy15363         25 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL---ASRVAASQ  101 (130)
Q Consensus        25 ~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~---~~r~~~~~  101 (130)
                      .+.+++.-+++|+    +.+.++.  +++..+|+.+|+++   .-.|++|+.|..++|+|+|-.+-...   ....-|..
T Consensus       224 ~~~~~~~~~~~~~----~~v~~f~--~dm~~~~~~ADLvI---sRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~  294 (357)
T COG0707         224 LEELKSAYNELGV----VRVLPFI--DDMAALLAAADLVI---SRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKF  294 (357)
T ss_pred             HHHHHHHHhhcCc----EEEeeHH--hhHHHHHHhccEEE---eCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHH
Confidence            3444444454443    6777776  56888999999998   13678999999999999998876544   34456777


Q ss_pred             HHhcCCCCceec---CHHHHHHHHHHhccCCC
Q psy15363        102 LATLGCPELIAR---THKEYQDIAIRLGTDRD  130 (130)
Q Consensus       102 l~~~g~~~~va~---~~~~y~~~a~~l~~d~e  130 (130)
                      +...|..-++.+   +.+.+.+...++.++||
T Consensus       295 l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~  326 (357)
T COG0707         295 LEKAGAALVIRQSELTPEKLAELILRLLSNPE  326 (357)
T ss_pred             HHhCCCEEEeccccCCHHHHHHHHHHHhcCHH
Confidence            877787766654   35788888888877653

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=97.96  E-value=0.00028  Score=56.72  Aligned_cols=121  Identities=20%  Similarity=0.183  Sum_probs=80.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccH-HHHHHHHHHcCCCC------------CCEEEecCCCHHHHHHhhccccEEEc--C
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGE-ANIQATAQALGLDQ------------HRILFSNVAAKEEHVRRGQLADVCLD--T   66 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~-~~l~~~~~~~g~~~------------~rv~f~g~~~~~~~~~~~~~~Dv~l~--~   66 (130)
                      +|.+++++.||..|+++.. -+++ +.+.++++++|+.-            ..|.+...+  -|+..+|+.+||..-  |
T Consensus       250 ~~~~l~~~~~~~llIlVPR-HpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm--GEL~l~y~~adiAFVGGS  326 (419)
T COG1519         250 AHQALKKQFPNLLLILVPR-HPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM--GELGLLYGIADIAFVGGS  326 (419)
T ss_pred             HHHHHHhhCCCceEEEecC-ChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH--hHHHHHHhhccEEEECCc
Confidence            5778889999999999985 4543 56778888887531            244444444  689999999999853  4


Q ss_pred             CCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccC
Q psy15363         67 PLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        67 ~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d  128 (130)
                      +--.||--.+|+.++|+|||+-+.-.-..-+...+++. |- .++.++ .+..+.++.+..+
T Consensus       327 lv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga-~~~v~~-~~~l~~~v~~l~~  385 (419)
T COG1519         327 LVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GA-GLQVED-ADLLAKAVELLLA  385 (419)
T ss_pred             ccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhc-CC-eEEECC-HHHHHHHHHHhcC
Confidence            43356666999999999999966543333344444432 21 244555 5566666555443

>KOG2941|consensus

Probab=97.92  E-value=9.4e-05  Score=58.42  Aligned_cols=109  Identities=16%  Similarity=0.120  Sum_probs=83.9

Q ss_pred             CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEE-ecCCCHHHHHHhhccccEE--EcCCCCC--CchHHHHHHhcCCc
Q psy15363         10 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILF-SNVAAKEEHVRRGQLADVC--LDTPLCN--GHTTSMDVLWTGTP   84 (130)
Q Consensus        10 ~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f-~g~~~~~~~~~~~~~~Dv~--l~~~~~~--~g~~~lEAla~G~P   84 (130)
                      .|+...+|-| .||.++...+.++++..  ++|.| +++...+|++.+++.||+-  |-|+..+  -++.+++-..||+|
T Consensus       291 lP~llciITG-KGPlkE~Y~~~I~~~~~--~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglP  367 (444)
T KOG2941|consen  291 LPSLLCIITG-KGPLKEKYSQEIHEKNL--QHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLP  367 (444)
T ss_pred             CCcEEEEEcC-CCchhHHHHHHHHHhcc--cceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCc
Confidence            4755555555 58999999999999887  46666 5888899999999999976  5555443  58999999999999


Q ss_pred             EEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhcc
Q psy15363         85 VVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        85 vV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~  127 (130)
                      |++.+-.+.-+      |-..|-++++-.|.+++.+...-|-+
T Consensus       368 vcA~~fkcl~E------LVkh~eNGlvF~Ds~eLa~ql~~lf~  404 (444)
T KOG2941|consen  368 VCAVNFKCLDE------LVKHGENGLVFEDSEELAEQLQMLFK  404 (444)
T ss_pred             eeeecchhHHH------HHhcCCCceEeccHHHHHHHHHHHHh
Confidence            99987664433      22358889999999988887766655

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=97.87  E-value=0.00011  Score=56.91  Aligned_cols=86  Identities=13%  Similarity=0.264  Sum_probs=62.3

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCc-hhhhhHHHHHHhcCCCCceecCHHHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET-LASRVAASQLATLGCPELIARTHKEY  118 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~-~~~r~~~~~l~~~g~~~~va~~~~~y  118 (130)
                      +++.+.++.+ +++..+|..||+++..   +|.+|+.||+++|+|+|..+-.. .....-+..+...|....+....-+.
T Consensus       229 ~~v~~~~~~~-~~~~~~l~~ad~vI~~---~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~~~  304 (321)
T TIGR00661       229 ENVEIRRITT-DNFKELIKNAELVITH---GGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKELRL  304 (321)
T ss_pred             CCEEEEECCh-HHHHHHHHhCCEEEEC---CChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhHHH
Confidence            5777777666 6788899999999943   34578999999999999987642 24555677788888876665544466


Q ss_pred             HHHHHHhccCC
Q psy15363        119 QDIAIRLGTDR  129 (130)
Q Consensus       119 ~~~a~~l~~d~  129 (130)
                      ++...+..+|+
T Consensus       305 ~~~~~~~~~~~  315 (321)
T TIGR00661       305 LEAILDIRNMK  315 (321)
T ss_pred             HHHHHhccccc
Confidence            66666655553

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=97.81  E-value=0.00045  Score=52.75  Aligned_cols=78  Identities=19%  Similarity=0.271  Sum_probs=55.0

Q ss_pred             CEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCc-hhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         41 RILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET-LASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~-~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      +|.+.+.. ..++..++..||+++..   +|-+|+.||+++|+|+|..+-.. ..+..-+..++..|+...+..   +.+
T Consensus       233 ni~~~~~~-~~~~~~~m~~ad~vIs~---~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~  308 (318)
T PF13528_consen  233 NIHVRPFS-TPDFAELMAAADLVISK---GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPE  308 (318)
T ss_pred             CEEEeecC-hHHHHHHHHhCCEEEEC---CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHH
Confidence            44444332 25678889999999932   34577999999999999997654 456667888999999877642   445


Q ss_pred             HHHHHH
Q psy15363        117 EYQDIA  122 (130)
Q Consensus       117 ~y~~~a  122 (130)
                      .+.+..
T Consensus       309 ~l~~~l  314 (318)
T PF13528_consen  309 RLAEFL  314 (318)
T ss_pred             HHHHHH
Confidence            554443

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.79  E-value=0.00018  Score=57.46  Aligned_cols=117  Identities=19%  Similarity=0.179  Sum_probs=71.7

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGT   83 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~   83 (130)
                      .++.++.|+.++++...+....+.+++..+..+.. -.+.+..    .+-...++.||+.+    -.+||+++|++.+|+
T Consensus       210 ~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~-~~~~~~~----~~~~~~m~~ad~al----~~SGTaTLE~Al~g~  280 (373)
T PF02684_consen  210 KLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPD-VSIVIIE----GESYDAMAAADAAL----AASGTATLEAALLGV  280 (373)
T ss_pred             HHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCC-CeEEEcC----CchHHHHHhCcchh----hcCCHHHHHHHHhCC
Confidence            45677889999887764333344466666666543 3333332    12334677999988    567899999999999


Q ss_pred             cEEecCCCchh-hhhHHHHH--HhcCCCCcee------------cCHHHHHHHHHHhccCC
Q psy15363         84 PVVTLPGETLA-SRVAASQL--ATLGCPELIA------------RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        84 PvV~~~g~~~~-~r~~~~~l--~~~g~~~~va------------~~~~~y~~~a~~l~~d~  129 (130)
                      |.|+...-++- -.++..++  +..|++.+++            -+++...+.+.+++.|+
T Consensus       281 P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~  341 (373)
T PF02684_consen  281 PMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP  341 (373)
T ss_pred             CEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH
Confidence            97766443332 22333332  2345554433            25666777777777765

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=97.78  E-value=0.00019  Score=56.54  Aligned_cols=107  Identities=15%  Similarity=0.112  Sum_probs=63.5

Q ss_pred             HHHHhhCCCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHH-HHHhc
Q psy15363          4 IFVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSM-DVLWT   81 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~l-EAla~   81 (130)
                      .++.+. ++..+++...+.+ ....+.+.++++    +++++..++++.++..+++.|++.+    -.+| .+. ||.++
T Consensus       207 ~~L~~~-~~~~vi~~~hn~p~~~~~i~~~l~~~----~~v~~~~~l~~~~~l~ll~~a~~vv----gdSs-GI~eEa~~l  276 (346)
T PF02350_consen  207 KALAER-QNVPVIFPLHNNPRGSDIIIEKLKKY----DNVRLIEPLGYEEYLSLLKNADLVV----GDSS-GIQEEAPSL  276 (346)
T ss_dssp             HHHHHH-TTEEEEEE--S-HHHHHHHHHHHTT-----TTEEEE----HHHHHHHHHHESEEE----ESSH-HHHHHGGGG
T ss_pred             HHHHhc-CCCcEEEEecCCchHHHHHHHHhccc----CCEEEECCCCHHHHHHHHhcceEEE----EcCc-cHHHHHHHh
Confidence            344444 7777777765323 344555555544    3999999999999999999999998    4455 567 99999


Q ss_pred             CCcEEecC--CCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhcc
Q psy15363         82 GTPVVTLP--GETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        82 G~PvV~~~--g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~  127 (130)
                      |+|+|+.+  |+...+|..       |-+-++..+.++-.+.+.++++
T Consensus       277 g~P~v~iR~~geRqe~r~~-------~~nvlv~~~~~~I~~ai~~~l~  317 (346)
T PF02350_consen  277 GKPVVNIRDSGERQEGRER-------GSNVLVGTDPEAIIQAIEKALS  317 (346)
T ss_dssp             T--EEECSSS-S-HHHHHT-------TSEEEETSSHHHHHHHHHHHHH
T ss_pred             CCeEEEecCCCCCHHHHhh-------cceEEeCCCHHHHHHHHHHHHh
Confidence            99999994  333334432       4444555566665555555543

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=97.72  E-value=0.00072  Score=53.53  Aligned_cols=74  Identities=12%  Similarity=0.132  Sum_probs=52.3

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCc-eecCHHHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPEL-IARTHKEY  118 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~-va~~~~~y  118 (130)
                      ++|.+.+.++..++..+++.||+++    -+++..+-||.++|+|||+..++ ..+|.       .|-+-+ +-.+.++.
T Consensus       262 ~~v~l~~~l~~~~~l~Ll~~a~~vi----tdSSggi~EA~~lg~Pvv~l~~R-~e~~~-------~g~nvl~vg~~~~~I  329 (365)
T TIGR03568       262 PNFRLFKSLGQERYLSLLKNADAVI----GNSSSGIIEAPSFGVPTINIGTR-QKGRL-------RADSVIDVDPDKEEI  329 (365)
T ss_pred             CCEEEECCCChHHHHHHHHhCCEEE----EcChhHHHhhhhcCCCEEeecCC-chhhh-------hcCeEEEeCCCHHHH
Confidence            6899999999999999999999999    33322348999999999988642 22221       133334 44567766


Q ss_pred             HHHHHHh
Q psy15363        119 QDIAIRL  125 (130)
Q Consensus       119 ~~~a~~l  125 (130)
                      .+.+.++
T Consensus       330 ~~a~~~~  336 (365)
T TIGR03568       330 VKAIEKL  336 (365)
T ss_pred             HHHHHHH
Confidence            6666553

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=97.55  E-value=0.00092  Score=55.08  Aligned_cols=82  Identities=20%  Similarity=-0.037  Sum_probs=59.7

Q ss_pred             HHHhhCCCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhcC
Q psy15363          5 FVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWTG   82 (130)
Q Consensus         5 ~il~~~P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~G   82 (130)
                      .++++.  .+++++|.+.+ .++.++.+++++.   +++.+.-..+..-...+|..+|++|-|+.+ .+|.+-++||..|
T Consensus       318 ~~l~~~--~~~vilG~gd~~le~~~~~la~~~~---~~~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG  392 (487)
T COG0297         318 ELLEQG--WQLVLLGTGDPELEEALRALASRHP---GRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG  392 (487)
T ss_pred             HHHHhC--ceEEEEecCcHHHHHHHHHHHHhcC---ceEEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC
Confidence            344444  88999997422 2456677777664   567766666655567788999999999976 5799999999999


Q ss_pred             CcEEecCCC
Q psy15363         83 TPVVTLPGE   91 (130)
Q Consensus        83 ~PvV~~~g~   91 (130)
                      ++.|+.+-.
T Consensus       393 tvpIv~~tG  401 (487)
T COG0297         393 TLPIVRETG  401 (487)
T ss_pred             CcceEcccC
Confidence            777766533

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=97.49  E-value=0.0016  Score=51.37  Aligned_cols=76  Identities=13%  Similarity=0.153  Sum_probs=53.7

Q ss_pred             HHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCc----hhhhhHHHHHHhcCCCCceec---CHHHHHHHHH
Q psy15363         51 EEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET----LASRVAASQLATLGCPELIAR---THKEYQDIAI  123 (130)
Q Consensus        51 ~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~----~~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~  123 (130)
                      +++..+|..||+++.   .+|++|+.|++++|+|.|..+-..    .....-+..+...|....+.+   +.+...+...
T Consensus       244 ~~m~~~~~~adlvIs---r~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~  320 (352)
T PRK12446        244 GELPDILAITDFVIS---RAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVE  320 (352)
T ss_pred             hhHHHHHHhCCEEEE---CCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHH
Confidence            457788999999882   357899999999999999885431    234445666777777654433   4567777777


Q ss_pred             HhccCC
Q psy15363        124 RLGTDR  129 (130)
Q Consensus       124 ~l~~d~  129 (130)
                      ++.+|+
T Consensus       321 ~ll~~~  326 (352)
T PRK12446        321 ELSHNN  326 (352)
T ss_pred             HHHcCH
Confidence            777664

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.38  E-value=0.00029  Score=49.37  Aligned_cols=84  Identities=18%  Similarity=0.216  Sum_probs=51.9

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCch---hhhhHHHHHHhcCCCCceec---
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL---ASRVAASQLATLGCPELIAR---  113 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~---~~r~~~~~l~~~g~~~~va~---  113 (130)
                      .+|.+.++.+  ++..+++.||+.+.   .+|+.|+.|++++|+|.|..+-...   ....-+..+...|....+.+   
T Consensus        55 ~~v~~~~~~~--~m~~~m~~aDlvIs---~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~  129 (167)
T PF04101_consen   55 PNVKVFGFVD--NMAELMAAADLVIS---HAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESEL  129 (167)
T ss_dssp             CCCEEECSSS--SHHHHHHHHSEEEE---CS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-
T ss_pred             CcEEEEechh--hHHHHHHHcCEEEe---CCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccC
Confidence            5899999985  46677889999981   3566899999999999988765541   22223445555666544332   


Q ss_pred             CHHHHHHHHHHhccC
Q psy15363        114 THKEYQDIAIRLGTD  128 (130)
Q Consensus       114 ~~~~y~~~a~~l~~d  128 (130)
                      +.++..+...++.+|
T Consensus       130 ~~~~L~~~i~~l~~~  144 (167)
T PF04101_consen  130 NPEELAEAIEELLSD  144 (167)
T ss_dssp             SCCCHHHHHHCHCCC
T ss_pred             CHHHHHHHHHHHHcC
Confidence            245566666665554

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=97.31  E-value=0.0036  Score=51.82  Aligned_cols=85  Identities=9%  Similarity=0.067  Sum_probs=54.7

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee---cCHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTHK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va---~~~~  116 (130)
                      ++|.+.+++|..+++. ...+++|+   ..+|..++.||+.+|+|+|..+--.-. ..-+..+...|....+.   -+.+
T Consensus       346 ~Nv~i~~w~Pq~~lL~-hp~v~~fI---tHGG~~s~~Eal~~GvP~v~iP~~~DQ-~~Na~rv~~~G~G~~l~~~~~t~~  420 (507)
T PHA03392        346 ANVLTQKWFPQRAVLK-HKNVKAFV---TQGGVQSTDEAIDALVPMVGLPMMGDQ-FYNTNKYVELGIGRALDTVTVSAA  420 (507)
T ss_pred             CceEEecCCCHHHHhc-CCCCCEEE---ecCCcccHHHHHHcCCCEEECCCCccH-HHHHHHHHHcCcEEEeccCCcCHH
Confidence            7888899999877642 24688887   346678899999999999999743211 12234445566654332   1445


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      +..+...++++||
T Consensus       421 ~l~~ai~~vl~~~  433 (507)
T PHA03392        421 QLVLAIVDVIENP  433 (507)
T ss_pred             HHHHHHHHHhCCH
Confidence            5555555555553

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=97.30  E-value=0.0016  Score=52.52  Aligned_cols=82  Identities=18%  Similarity=0.305  Sum_probs=57.0

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee---cCHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTHK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va---~~~~  116 (130)
                      ++++..+.+|..+   ++..||+++   ..+|.+|+.||+..|+|+|..+.. +-.-.-+..+...|.+..+.   .+.+
T Consensus       284 ~n~~v~~~~p~~~---~l~~ad~vI---~hGG~gtt~eaL~~gvP~vv~P~~-~DQ~~nA~rve~~G~G~~l~~~~l~~~  356 (406)
T COG1819         284 DNVIVADYVPQLE---LLPRADAVI---HHGGAGTTSEALYAGVPLVVIPDG-ADQPLNAERVEELGAGIALPFEELTEE  356 (406)
T ss_pred             CceEEecCCCHHH---HhhhcCEEE---ecCCcchHHHHHHcCCCEEEecCC-cchhHHHHHHHHcCCceecCcccCCHH
Confidence            6788888888766   457999998   245678999999999999999765 22223456667788876554   3455


Q ss_pred             HHHHHHHHhccC
Q psy15363        117 EYQDIAIRLGTD  128 (130)
Q Consensus       117 ~y~~~a~~l~~d  128 (130)
                      ...+...++++|
T Consensus       357 ~l~~av~~vL~~  368 (406)
T COG1819         357 RLRAAVNEVLAD  368 (406)
T ss_pred             HHHHHHHHHhcC
Confidence            555555555444

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=97.21  E-value=0.0011  Score=53.94  Aligned_cols=83  Identities=12%  Similarity=0.244  Sum_probs=48.4

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC--CchhhhhHHHHHHhcCCCCcee---cC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG--ETLASRVAASQLATLGCPELIA---RT  114 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g--~~~~~r~~~~~l~~~g~~~~va---~~  114 (130)
                      +++.+..++|+.++++ ...+++|+   ..+|-+++.||+++|+|+|+.+-  +..   .-+..+...|....+.   -+
T Consensus       323 ~n~~~~~W~PQ~~lL~-hp~v~~fi---tHgG~~s~~Ea~~~gvP~l~~P~~~DQ~---~na~~~~~~G~g~~l~~~~~~  395 (500)
T PF00201_consen  323 KNVLIVKWLPQNDLLA-HPRVKLFI---THGGLNSTQEALYHGVPMLGIPLFGDQP---RNAARVEEKGVGVVLDKNDLT  395 (500)
T ss_dssp             TTEEEESS--HHHHHT-STTEEEEE---ES--HHHHHHHHHCT--EEE-GCSTTHH---HHHHHHHHTTSEEEEGGGC-S
T ss_pred             ceEEEeccccchhhhh-cccceeee---eccccchhhhhhhccCCccCCCCcccCC---ccceEEEEEeeEEEEEecCCc
Confidence            6778888888877654 34466776   25667899999999999999863  322   2344556667754332   14


Q ss_pred             HHHHHHHHHHhccCC
Q psy15363        115 HKEYQDIAIRLGTDR  129 (130)
Q Consensus       115 ~~~y~~~a~~l~~d~  129 (130)
                      .++..+...++++|+
T Consensus       396 ~~~l~~ai~~vl~~~  410 (500)
T PF00201_consen  396 EEELRAAIREVLENP  410 (500)
T ss_dssp             HHHHHHHHHHHHHSH
T ss_pred             HHHHHHHHHHHHhhh
Confidence            556666666665553

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PLN02167 UDP-glycosyltransferase family protein

Probab=96.98  E-value=0.0097  Score=48.85  Aligned_cols=47  Identities=23%  Similarity=0.335  Sum_probs=30.9

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +|..+.+++|..+++. ...++.|+   ..+|-++++||+++|+|+|+.+-
T Consensus       340 ~rg~v~~w~PQ~~iL~-h~~vg~fv---tH~G~nS~~Eal~~GvP~l~~P~  386 (475)
T PLN02167        340 GRGLVCGWAPQVEILA-HKAIGGFV---SHCGWNSVLESLWFGVPIATWPM  386 (475)
T ss_pred             cCeeeeccCCHHHHhc-CcccCeEE---eeCCcccHHHHHHcCCCEEeccc
Confidence            3445556666655432 22355566   23455799999999999999863

>PLN03004 UDP-glycosyltransferase

Probab=96.96  E-value=0.011  Score=48.30  Aligned_cols=45  Identities=16%  Similarity=0.233  Sum_probs=35.0

Q ss_pred             CCEEEecCCCHHHHHHhhccccE--EEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADV--CLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv--~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      .++++.+++|..++   ++.+++  |+   ..+|-++++||+++|||+|+.+-
T Consensus       334 ~g~~v~~W~PQ~~i---L~H~~v~~Fv---TH~G~nS~lEal~~GVP~v~~P~  380 (451)
T PLN03004        334 KGMVVKSWAPQVPV---LNHKAVGGFV---THCGWNSILEAVCAGVPMVAWPL  380 (451)
T ss_pred             CcEEEEeeCCHHHH---hCCCccceEe---ccCcchHHHHHHHcCCCEEeccc
Confidence            56788889988775   456776  55   24566899999999999999974

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=96.95  E-value=0.004  Score=49.71  Aligned_cols=100  Identities=15%  Similarity=0.113  Sum_probs=57.0

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHH-HHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQA-TAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTG   82 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~-~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G   82 (130)
                      .++.+++|+.++++--.+ ...+.++. ..+..... -.+++.+..    -...+..||+.|    -.+||+++|++.+|
T Consensus       214 ~~l~~~~~~~~~vlp~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~a~~~aD~al----~aSGT~tLE~aL~g  283 (381)
T COG0763         214 QELKARYPDLKFVLPLVN-AKYRRIIEEALKWEVAG-LSLILIDGE----KRKAFAAADAAL----AASGTATLEAALAG  283 (381)
T ss_pred             HHHHhhCCCceEEEecCc-HHHHHHHHHHhhccccC-ceEEecCch----HHHHHHHhhHHH----HhccHHHHHHHHhC
Confidence            445568899998776543 33233333 33333321 234444433    234567899887    56789999999999


Q ss_pred             CcEEecCCCchhhh-hHHHH--HHhcCCCCceec
Q psy15363         83 TPVVTLPGETLASR-VAASQ--LATLGCPELIAR  113 (130)
Q Consensus        83 ~PvV~~~g~~~~~r-~~~~~--l~~~g~~~~va~  113 (130)
                      +|.|....-.+... +..-.  +...+++.++++
T Consensus       284 ~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~  317 (381)
T COG0763         284 TPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAG  317 (381)
T ss_pred             CCEEEEEeccHHHHHHHHHhccCCcccchHHhcC
Confidence            99887654444333 22211  133466655543

>PLN02562 UDP-glycosyltransferase

Probab=96.94  E-value=0.013  Score=47.76  Aligned_cols=47  Identities=15%  Similarity=0.168  Sum_probs=32.7

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +|+.+.+++|+.+++.. ..+-.|+   ..+|-++++||+++|+|+|+.+-
T Consensus       328 ~~~~v~~w~PQ~~iL~h-~~v~~fv---tH~G~nS~~Eal~~GvP~l~~P~  374 (448)
T PLN02562        328 KQGKVVSWAPQLEVLKH-QAVGCYL---THCGWNSTMEAIQCQKRLLCYPV  374 (448)
T ss_pred             cCEEEEecCCHHHHhCC-CccceEE---ecCcchhHHHHHHcCCCEEeCCc
Confidence            57777788887765431 2233455   24556889999999999999863

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=96.89  E-value=0.0038  Score=47.19  Aligned_cols=80  Identities=18%  Similarity=0.191  Sum_probs=51.4

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHc-CCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQAL-GLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~-g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~   81 (130)
                      ...+.+..|+.+|++.-+|......-.+...+. +.. +++.+....+-.+   ++..||.++    --.+++-+||+.+
T Consensus       146 l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---Ll~~s~~Vv----tinStvGlEAll~  217 (269)
T PF05159_consen  146 LESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLP-NVVIIDDDVNLYE---LLEQSDAVV----TINSTVGLEALLH  217 (269)
T ss_pred             HHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCC-CeEEECCCCCHHH---HHHhCCEEE----EECCHHHHHHHHc
Confidence            345677889999998887421101111333333 332 5566666665444   467899987    3346889999999


Q ss_pred             CCcEEecCC
Q psy15363         82 GTPVVTLPG   90 (130)
Q Consensus        82 G~PvV~~~g   90 (130)
                      |+||+++..
T Consensus       218 gkpVi~~G~  226 (269)
T PF05159_consen  218 GKPVIVFGR  226 (269)
T ss_pred             CCceEEecC
Confidence            999999743

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=96.88  E-value=0.0068  Score=47.45  Aligned_cols=89  Identities=16%  Similarity=-0.003  Sum_probs=55.3

Q ss_pred             HHHHHhhC--CCcEEEEeecCccc-HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH
Q psy15363          3 DIFVLKAV--PNSILWLLKFPAVG-EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL   79 (130)
Q Consensus         3 w~~il~~~--P~a~l~i~g~~~~~-~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl   79 (130)
                      |+++.+..  .+.+++++|+++.. .+..++..+... ....+.+.|..+-.++.++++.||+|+  ...+|.+=  =|-
T Consensus       204 fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~-~~~~~~l~g~~sL~el~ali~~a~l~v--~nDSGp~H--lAa  278 (352)
T PRK10422        204 FSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQ-TPPVTALAGKTTFPELGALIDHAQLFI--GVDSAPAH--IAA  278 (352)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcC-CCccccccCCCCHHHHHHHHHhCCEEE--ecCCHHHH--HHH
Confidence            55555443  25788888753222 222344443322 213466789999999999999999998  22333222  356


Q ss_pred             hcCCcEEecCCCchhhh
Q psy15363         80 WTGTPVVTLPGETLASR   96 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r   96 (130)
                      |+|+|+|++-|.....+
T Consensus       279 A~g~P~v~lfGpt~p~~  295 (352)
T PRK10422        279 AVNTPLICLFGATDHIF  295 (352)
T ss_pred             HcCCCEEEEECCCCccc
Confidence            88999999977654333

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=96.75  E-value=0.023  Score=45.47  Aligned_cols=114  Identities=18%  Similarity=0.148  Sum_probs=78.9

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHH-HHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATA-QALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~-~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      ...+|++++|+..++.--++.   +.+++.. ..++-. +||+++.++...++..++..|-+.+    -.+|.--=||-.
T Consensus       227 al~~i~~~~~~~~viyp~H~~---~~v~e~~~~~L~~~-~~v~li~pl~~~~f~~L~~~a~~il----tDSGgiqEEAp~  298 (383)
T COG0381         227 ALREIAEEYPDVIVIYPVHPR---PRVRELVLKRLKNV-ERVKLIDPLGYLDFHNLMKNAFLIL----TDSGGIQEEAPS  298 (383)
T ss_pred             HHHHHHHhCCCceEEEeCCCC---hhhhHHHHHHhCCC-CcEEEeCCcchHHHHHHHHhceEEE----ecCCchhhhHHh
Confidence            356788889888876655432   5566654 566654 7899999999999999999997776    334455789999


Q ss_pred             cCCcEEecCCCc-hhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGET-LASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~-~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      .|+||++++..+ ...++.+      |-.-++-.+.+..++.+.++++|+
T Consensus       299 lg~Pvl~lR~~TERPE~v~a------gt~~lvg~~~~~i~~~~~~ll~~~  342 (383)
T COG0381         299 LGKPVLVLRDTTERPEGVEA------GTNILVGTDEENILDAATELLEDE  342 (383)
T ss_pred             cCCcEEeeccCCCCccceec------CceEEeCccHHHHHHHHHHHhhCh
Confidence            999999996432 2344433      333455556666666676666664

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=96.69  E-value=0.015  Score=43.91  Aligned_cols=89  Identities=18%  Similarity=0.105  Sum_probs=58.6

Q ss_pred             HHHHHhhCC--CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          3 DIFVLKAVP--NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         3 w~~il~~~P--~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      |.++.+...  +.+++++|+ +.+++..+++.+..+ ..+-+.+.|..+-.|+..+++.||+++.+  .+ |..-+ |.+
T Consensus       142 ~~~l~~~l~~~~~~ivl~g~-~~e~~~~~~i~~~~~-~~~~~~~~~~~~l~e~~~li~~~~l~I~~--Ds-g~~Hl-A~a  215 (279)
T cd03789         142 FAALADRLLARGARVVLTGG-PAERELAEEIAAALG-GPRVVNLAGKTSLRELAALLARADLVVTN--DS-GPMHL-AAA  215 (279)
T ss_pred             HHHHHHHHHHCCCEEEEEec-hhhHHHHHHHHHhcC-CCccccCcCCCCHHHHHHHHHhCCEEEee--CC-HHHHH-HHH
Confidence            444444432  678888885 345555666555544 22446678888889999999999999832  22 33333 358


Q ss_pred             cCCcEEecCCCchhhhh
Q psy15363         81 TGTPVVTLPGETLASRV   97 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~   97 (130)
                      .|+|+|+.-|.....++
T Consensus       216 ~~~p~i~l~g~~~~~~~  232 (279)
T cd03789         216 LGTPTVALFGPTDPART  232 (279)
T ss_pred             cCCCEEEEECCCCcccc
Confidence            99999999776554443

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN02173 UDP-glucosyl transferase family protein

Probab=96.64  E-value=0.013  Score=47.83  Aligned_cols=85  Identities=13%  Similarity=0.125  Sum_probs=48.8

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHH-hcCCCCcee------
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLA-TLGCPELIA------  112 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~-~~g~~~~va------  112 (130)
                      +++.+.+++|..+++. ...+..|+   ..+|.++++||+++|+|+|+.+--.- ...-+.++. ..|+.--+.      
T Consensus       317 ~~~~i~~W~PQ~~iL~-H~~v~~Fv---tHcGwnS~~Eai~~GVP~l~~P~~~D-Q~~Na~~v~~~~g~Gv~v~~~~~~~  391 (449)
T PLN02173        317 DKSLVLKWSPQLQVLS-NKAIGCFM---THCGWNSTMEGLSLGVPMVAMPQWTD-QPMNAKYIQDVWKVGVRVKAEKESG  391 (449)
T ss_pred             CceEEeCCCCHHHHhC-CCccceEE---ecCccchHHHHHHcCCCEEecCchhc-chHHHHHHHHHhCceEEEeecccCC
Confidence            5677788888766543 12234555   24567899999999999999973211 112223332 223332111      


Q ss_pred             -cCHHHHHHHHHHhccCC
Q psy15363        113 -RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus       113 -~~~~~y~~~a~~l~~d~  129 (130)
                       -+.++..+...++..|+
T Consensus       392 ~~~~e~v~~av~~vm~~~  409 (449)
T PLN02173        392 IAKREEIEFSIKEVMEGE  409 (449)
T ss_pred             cccHHHHHHHHHHHhcCC
Confidence             14566666666666554

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=96.59  E-value=0.042  Score=46.55  Aligned_cols=70  Identities=14%  Similarity=0.130  Sum_probs=43.9

Q ss_pred             HhhccccEEEcCCCCCCchHHHHHHhcCCcEEecC-CCchhhhhHHHHHH----hcCC----------CCce----ecCH
Q psy15363         55 RRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP-GETLASRVAASQLA----TLGC----------PELI----ARTH  115 (130)
Q Consensus        55 ~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~-g~~~~~r~~~~~l~----~~g~----------~~~v----a~~~  115 (130)
                      .+++.||+.|    -.+||+++|++.+|+|.|+.. -....-.++.-+++    ..++          ||++    .-++
T Consensus       484 ~~m~aaD~aL----aaSGTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tp  559 (608)
T PRK01021        484 ELMRECDCAL----AKCGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQP  559 (608)
T ss_pred             HHHHhcCeee----ecCCHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCH
Confidence            5677888888    567899999999999977654 33222223333333    2333          4677    2346


Q ss_pred             HHHHHHHHHhccCC
Q psy15363        116 KEYQDIAIRLGTDR  129 (130)
Q Consensus       116 ~~y~~~a~~l~~d~  129 (130)
                      +...+. .+++.|+
T Consensus       560 e~La~~-l~lL~d~  572 (608)
T PRK01021        560 EEVAAA-LDILKTS  572 (608)
T ss_pred             HHHHHH-HHHhcCH
Confidence            666654 5777765

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=96.56  E-value=0.017  Score=45.06  Aligned_cols=85  Identities=14%  Similarity=0.009  Sum_probs=55.9

Q ss_pred             HHHHHhhC--CCcEEEEeecCcccHHHHHHHHHHcCCC-CCC-EEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHH
Q psy15363          3 DIFVLKAV--PNSILWLLKFPAVGEANIQATAQALGLD-QHR-ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDV   78 (130)
Q Consensus         3 w~~il~~~--P~a~l~i~g~~~~~~~~l~~~~~~~g~~-~~r-v~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEA   78 (130)
                      |+++.+..  .+.+++++|+ +.+++..++..+..+-. ..+ +.+.|..+-.++.++++.||+++  ...+|.+  ==|
T Consensus       202 ~a~l~~~l~~~~~~vvl~Gg-~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~~a~l~I--~nDTGp~--HlA  276 (348)
T PRK10916        202 YAELAQQLIDEGYQVVLFGS-AKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAACKAIV--TNDSGLM--HVA  276 (348)
T ss_pred             HHHHHHHHHHCCCeEEEEeC-HHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHHHHhCCEEE--ecCChHH--HHH
Confidence            66666543  3678888885 34555555554443321 023 56778888899999999999998  2222222  236


Q ss_pred             HhcCCcEEecCCCc
Q psy15363         79 LWTGTPVVTLPGET   92 (130)
Q Consensus        79 la~G~PvV~~~g~~   92 (130)
                      -|.|+|+|++-|..
T Consensus       277 aA~g~P~valfGpt  290 (348)
T PRK10916        277 AALNRPLVALYGPS  290 (348)
T ss_pred             HHhCCCEEEEECCC
Confidence            78999999997754

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=96.54  E-value=0.033  Score=45.90  Aligned_cols=47  Identities=15%  Similarity=0.251  Sum_probs=33.7

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      ..+++.+++|..+++. ...++.|+   ..+|-++++||+++|+|+|+.+-
T Consensus       343 ~g~~v~~w~PQ~~vL~-h~~v~~fv---tH~G~nS~~Eal~~GvP~l~~P~  389 (477)
T PLN02863        343 RGLVIRGWAPQVAILS-HRAVGAFL---THCGWNSVLEGLVAGVPMLAWPM  389 (477)
T ss_pred             CCEEecCCCCHHHHhc-CCCcCeEE---ecCCchHHHHHHHcCCCEEeCCc
Confidence            3466778888766543 13467776   24556899999999999999963

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=96.50  E-value=0.083  Score=42.96  Aligned_cols=94  Identities=16%  Similarity=0.116  Sum_probs=65.5

Q ss_pred             HHHHHHHHcCCCCCCEEE-ecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhc
Q psy15363         27 NIQATAQALGLDQHRILF-SNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATL  105 (130)
Q Consensus        27 ~l~~~~~~~g~~~~rv~f-~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~  105 (130)
                      ..++..+...- ++++++ .+..+..|+..+++.||+++.+--    -+++=|+.+|+|+|...-+    .=..++++.+
T Consensus       295 ~~~~l~~~~~~-~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl----Ha~I~a~~~gvP~i~i~Y~----~K~~~~~~~l  365 (426)
T PRK10017        295 VALNLRQHVSD-PARYHVVMDELNDLEMGKILGACELTVGTRL----HSAIISMNFGTPAIAINYE----HKSAGIMQQL  365 (426)
T ss_pred             HHHHHHHhccc-ccceeEecCCCChHHHHHHHhhCCEEEEecc----hHHHHHHHcCCCEEEeeeh----HHHHHHHHHc
Confidence            34455555543 255544 344455688899999999985432    3578899999999998643    3456788999


Q ss_pred             CCCCceec----CHHHHHHHHHHhccCC
Q psy15363        106 GCPELIAR----THKEYQDIAIRLGTDR  129 (130)
Q Consensus       106 g~~~~va~----~~~~y~~~a~~l~~d~  129 (130)
                      |+++++.+    +.++.++...++.+|.
T Consensus       366 g~~~~~~~~~~l~~~~Li~~v~~~~~~r  393 (426)
T PRK10017        366 GLPEMAIDIRHLLDGSLQAMVADTLGQL  393 (426)
T ss_pred             CCccEEechhhCCHHHHHHHHHHHHhCH
Confidence            99998542    5677888888877764

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=96.50  E-value=0.023  Score=43.98  Aligned_cols=87  Identities=16%  Similarity=0.023  Sum_probs=56.3

Q ss_pred             HHHHHhhC--CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          3 DIFVLKAV--PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         3 w~~il~~~--P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      |+++.+..  .+..+++.|+ +.+++..++..+..  ....+.+.|..+-.++.++++.||+++  ...+|.+  ==|-|
T Consensus       196 ~~~li~~l~~~~~~ivl~G~-~~e~~~~~~i~~~~--~~~~~~l~g~~sL~el~ali~~a~l~I--~~DSGp~--HlAaA  268 (334)
T TIGR02195       196 YAELAKRLIDQGYQVVLFGS-AKDHPAGNEIEALL--PGELRNLAGETSLDEAVDLIALAKAVV--TNDSGLM--HVAAA  268 (334)
T ss_pred             HHHHHHHHHHCCCEEEEEEC-hhhHHHHHHHHHhC--CcccccCCCCCCHHHHHHHHHhCCEEE--eeCCHHH--HHHHH
Confidence            55555443  3578888885 34555555544432  213345789889899999999999998  2222222  23668


Q ss_pred             cCCcEEecCCCchhhh
Q psy15363         81 TGTPVVTLPGETLASR   96 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r   96 (130)
                      .|+|+|++-|.....+
T Consensus       269 ~~~P~i~lfG~t~p~~  284 (334)
T TIGR02195       269 LNRPLVALYGSTSPDF  284 (334)
T ss_pred             cCCCEEEEECCCChhh
Confidence            9999999977654333

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=96.48  E-value=0.022  Score=44.29  Aligned_cols=86  Identities=15%  Similarity=0.013  Sum_probs=54.1

Q ss_pred             HHHHHhhC--CCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH
Q psy15363          3 DIFVLKAV--PNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL   79 (130)
Q Consensus         3 w~~il~~~--P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl   79 (130)
                      |.++.+..  .+..++++|++.. +++..++..+..+-. .-+.+.|..+-.|+.++++.||+++.  ..+|.  +==|-
T Consensus       202 ~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~-~~~~l~g~~sL~el~ali~~a~l~Vs--~DSGp--~HlAa  276 (344)
T TIGR02201       202 FSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTP-RVTSLAGKLTLPQLAALIDHARLFIG--VDSVP--MHMAA  276 (344)
T ss_pred             HHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCC-cccccCCCCCHHHHHHHHHhCCEEEe--cCCHH--HHHHH
Confidence            55555433  3577888885322 222334433332221 23557899999999999999999982  23332  23377


Q ss_pred             hcCCcEEecCCCch
Q psy15363         80 WTGTPVVTLPGETL   93 (130)
Q Consensus        80 a~G~PvV~~~g~~~   93 (130)
                      |+|+|+|++-|...
T Consensus       277 A~g~p~v~Lfgpt~  290 (344)
T TIGR02201       277 ALGTPLVALFGPSK  290 (344)
T ss_pred             HcCCCEEEEECCCC
Confidence            89999999977543

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=96.44  E-value=0.022  Score=46.59  Aligned_cols=47  Identities=15%  Similarity=0.174  Sum_probs=34.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +|....+++|..+++. ...+..|+   ..+|-++++||+++|+|+|+.+-
T Consensus       324 ~~g~v~~w~PQ~~iL~-h~~v~~fv---tH~G~nS~~Ea~~~GvP~l~~P~  370 (451)
T PLN02410        324 GRGYIVKWAPQKEVLS-HPAVGGFW---SHCGWNSTLESIGEGVPMICKPF  370 (451)
T ss_pred             CCeEEEccCCHHHHhC-CCccCeee---ecCchhHHHHHHHcCCCEEeccc
Confidence            6777778888777643 23355566   23455799999999999999964

>PLN02448 UDP-glycosyltransferase family protein

Probab=96.42  E-value=0.024  Score=46.35  Aligned_cols=44  Identities=16%  Similarity=0.263  Sum_probs=29.0

Q ss_pred             CEEEecCCCHHHHHHhhccccE--EEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         41 RILFSNVAAKEEHVRRGQLADV--CLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv--~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      |+.+.+++|..+++.   ..++  |+   ..+|-++++||+++|+|+|+.+-
T Consensus       324 ~~~v~~w~pQ~~iL~---h~~v~~fv---tHgG~nS~~eal~~GvP~l~~P~  369 (459)
T PLN02448        324 MGLVVPWCDQLKVLC---HSSVGGFW---THCGWNSTLEAVFAGVPMLTFPL  369 (459)
T ss_pred             CEEEeccCCHHHHhc---cCccceEE---ecCchhHHHHHHHcCCCEEeccc
Confidence            455555555554432   3333  44   24566899999999999999974

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=96.34  E-value=0.1  Score=43.18  Aligned_cols=83  Identities=14%  Similarity=0.220  Sum_probs=50.8

Q ss_pred             CCEEEecCCCHHHHHHhhccccE--EEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHH-HhcCCCCcee----
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADV--CLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL-ATLGCPELIA----  112 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv--~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l-~~~g~~~~va----  112 (130)
                      ..+++.+++|+.+++   ....+  |+   ..+|-++++||+++|+|+|+.+--.- ...-+..+ ...|+.-.+.    
T Consensus       338 rg~vv~~W~PQ~~iL---~h~~vg~Fi---tH~G~nS~~Eal~~GVP~l~~P~~~D-Q~~na~~~~~~~g~gv~~~~~~~  410 (481)
T PLN02992        338 RGFVVPSWAPQAEIL---AHQAVGGFL---THCGWSSTLESVVGGVPMIAWPLFAE-QNMNAALLSDELGIAVRSDDPKE  410 (481)
T ss_pred             CCEEEeecCCHHHHh---CCcccCeeE---ecCchhHHHHHHHcCCCEEecCccch-hHHHHHHHHHHhCeeEEecCCCC
Confidence            458888999987764   34444  55   34567899999999999999974211 11223333 3556553332    


Q ss_pred             -cCHHHHHHHHHHhccCC
Q psy15363        113 -RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus       113 -~~~~~y~~~a~~l~~d~  129 (130)
                       -+.++..+...++..|+
T Consensus       411 ~~~~~~l~~av~~vm~~~  428 (481)
T PLN02992        411 VISRSKIEALVRKVMVEE  428 (481)
T ss_pred             cccHHHHHHHHHHHhcCC
Confidence             14456666666665543

>PLN02210 UDP-glucosyl transferase

Probab=96.31  E-value=0.071  Score=43.64  Aligned_cols=45  Identities=16%  Similarity=0.289  Sum_probs=31.5

Q ss_pred             CCEEEecCCCHHHHHHhhcccc--EEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLAD--VCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~D--v~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +|..+.+++|..+++   +.+.  .|+   ..+|-++++||+++|+|+|+.+-
T Consensus       324 ~~g~v~~w~PQ~~iL---~h~~vg~Fi---tH~G~nS~~Eai~~GVP~v~~P~  370 (456)
T PLN02210        324 GQGVVLEWSPQEKIL---SHMAISCFV---THCGWNSTIETVVAGVPVVAYPS  370 (456)
T ss_pred             CCeEEEecCCHHHHh---cCcCcCeEE---eeCCcccHHHHHHcCCCEEeccc
Confidence            444566778776654   3444  666   23455789999999999999964

>PLN02555 limonoid glucosyltransferase

Probab=96.28  E-value=0.03  Score=46.18  Aligned_cols=47  Identities=19%  Similarity=0.294  Sum_probs=33.8

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +|+.+.+++|+.+++. ...+..|+   ..+|-++++||+++|+|+|+.+-
T Consensus       337 ~~g~v~~W~PQ~~iL~-H~~v~~Fv---tH~G~nS~~Eai~~GVP~l~~P~  383 (480)
T PLN02555        337 DKGKIVQWCPQEKVLA-HPSVACFV---THCGWNSTMEALSSGVPVVCFPQ  383 (480)
T ss_pred             CceEEEecCCHHHHhC-CCccCeEE---ecCCcchHHHHHHcCCCEEeCCC
Confidence            5666677777666542 24566666   24456899999999999999964

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=96.27  E-value=0.092  Score=40.72  Aligned_cols=64  Identities=17%  Similarity=0.192  Sum_probs=46.4

Q ss_pred             EeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCc--EEecCC
Q psy15363         17 LLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTP--VVTLPG   90 (130)
Q Consensus        17 i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~P--vV~~~g   90 (130)
                      ++|...+....+++.++++    +++.+.-..  +++..++..||..+    -.+|.|+.||+..|+|  +++...
T Consensus       191 V~gs~~p~l~~l~k~~~~~----~~i~~~~~~--~dma~LMke~d~aI----~AaGstlyEa~~lgvP~l~l~~a~  256 (318)
T COG3980         191 VVGSSNPTLKNLRKRAEKY----PNINLYIDT--NDMAELMKEADLAI----SAAGSTLYEALLLGVPSLVLPLAE  256 (318)
T ss_pred             EecCCCcchhHHHHHHhhC----CCeeeEecc--hhHHHHHHhcchhe----eccchHHHHHHHhcCCceEEeeec
Confidence            4554345556666666653    677766544  56778889999988    6689999999999999  666644

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=96.26  E-value=0.034  Score=42.68  Aligned_cols=88  Identities=18%  Similarity=0.001  Sum_probs=55.9

Q ss_pred             hHHHHHhhCC--CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH
Q psy15363          2 SDIFVLKAVP--NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P--~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl   79 (130)
                      -|+++.+...  +..++++++++.+++..++..+..+    ...+.|..+-.++.++++.||+++  ...+|.+=  =|-
T Consensus       199 ~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~----~~~l~g~~sL~el~ali~~a~l~I--~~DSgp~H--lAa  270 (319)
T TIGR02193       199 RWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALP----GAVVLPKMSLAEVAALLAGADAVV--GVDTGLTH--LAA  270 (319)
T ss_pred             HHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCC----CCeecCCCCHHHHHHHHHcCCEEE--eCCChHHH--HHH
Confidence            3666665543  4677777533234444555544322    235778889899999999999998  22232222  255


Q ss_pred             hcCCcEEecCCCchhhhh
Q psy15363         80 WTGTPVVTLPGETLASRV   97 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~   97 (130)
                      ++|+|+|++-|.....++
T Consensus       271 a~g~P~i~lfg~t~p~~~  288 (319)
T TIGR02193       271 ALDKPTVTLYGATDPGRT  288 (319)
T ss_pred             HcCCCEEEEECCCCHhhc
Confidence            789999999876655554

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.23  E-value=0.018  Score=42.41  Aligned_cols=90  Identities=23%  Similarity=0.158  Sum_probs=52.6

Q ss_pred             HHHHHhhCCC--cEEEEeecCccc-HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH
Q psy15363          3 DIFVLKAVPN--SILWLLKFPAVG-EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL   79 (130)
Q Consensus         3 w~~il~~~P~--a~l~i~g~~~~~-~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl   79 (130)
                      |.++.+...+  ..++++|++ .+ .+.+.+.+.+ +.....+.+.|..+-.++..+++.||+++.  ..+|  .+==|.
T Consensus       126 ~~~l~~~l~~~~~~vvl~g~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~e~~ali~~a~~~I~--~Dtg--~~HlA~  199 (247)
T PF01075_consen  126 WAELIERLKERGYRVVLLGGP-EEQEKEIADQIAA-GLQNPVINLAGKTSLRELAALISRADLVIG--NDTG--PMHLAA  199 (247)
T ss_dssp             HHHHHHHHCCCT-EEEE--SS-HHHHHHHHHHHHT-THTTTTEEETTTS-HHHHHHHHHTSSEEEE--ESSH--HHHHHH
T ss_pred             HHHHHHHHHhhCceEEEEccc-hHHHHHHHHHHHH-hcccceEeecCCCCHHHHHHHHhcCCEEEe--cCCh--HHHHHH
Confidence            6666666653  467888853 33 2222222222 332136888899999999999999999982  1221  233477


Q ss_pred             hcCCcEEecCCCchhhhhH
Q psy15363         80 WTGTPVVTLPGETLASRVA   98 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~   98 (130)
                      +.|+|+|++-|.....+++
T Consensus       200 a~~~p~v~lfg~t~~~~~~  218 (247)
T PF01075_consen  200 ALGTPTVALFGPTNPERWG  218 (247)
T ss_dssp             HTT--EEEEESSS-HHHHS
T ss_pred             HHhCCEEEEecCCCHHHhC
Confidence            8999999998876655554

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=96.21  E-value=0.012  Score=46.53  Aligned_cols=53  Identities=15%  Similarity=0.194  Sum_probs=33.2

Q ss_pred             HhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHH---hcCCCCce
Q psy15363         55 RRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLA---TLGCPELI  111 (130)
Q Consensus        55 ~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~---~~g~~~~v  111 (130)
                      .+|+.||+.+    ..+|++++|++.+|+|.|....-++.+..-+..+-   ..|++.++
T Consensus       231 ~~m~~aDlal----~~SGT~TLE~al~g~P~Vv~Yk~~~lty~iak~lv~~~~igL~Nii  286 (347)
T PRK14089        231 KALLEAEFAF----ICSGTATLEAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIF  286 (347)
T ss_pred             HHHHhhhHHH----hcCcHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHcCCeeehHHHh
Confidence            4566777777    56789999999999998875433333332233333   44555544

>PLN03007 UDP-glucosyltransferase family protein

Probab=96.20  E-value=0.086  Score=43.38  Aligned_cols=44  Identities=16%  Similarity=0.244  Sum_probs=31.5

Q ss_pred             CCEEEecCCCHHHHHHhhccccE--EEcCCCCCCchHHHHHHhcCCcEEecC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADV--CLDTPLCNGHTTSMDVLWTGTPVVTLP   89 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv--~l~~~~~~~g~~~lEAla~G~PvV~~~   89 (130)
                      .++++.+++|..+++   ..+++  |+   ..+|-++++||+++|+|+|+.+
T Consensus       345 ~g~~v~~w~PQ~~iL---~h~~v~~fv---tH~G~nS~~Eal~~GVP~v~~P  390 (482)
T PLN03007        345 KGLIIRGWAPQVLIL---DHQATGGFV---THCGWNSLLEGVAAGLPMVTWP  390 (482)
T ss_pred             CCEEEecCCCHHHHh---ccCccceee---ecCcchHHHHHHHcCCCeeecc
Confidence            456777777766543   34444  55   2445689999999999999996

>PLN02670 transferase, transferring glycosyl groups

Probab=96.19  E-value=0.11  Score=42.72  Aligned_cols=82  Identities=10%  Similarity=0.012  Sum_probs=45.8

Q ss_pred             EEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee-------cC
Q psy15363         42 ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA-------RT  114 (130)
Q Consensus        42 v~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va-------~~  114 (130)
                      +++.+++|..+++. ...+..|+   ..+|-++++||+++|+|+|+.+--. -....+.++...|+.--+.       -+
T Consensus       341 ~vv~~W~PQ~~IL~-H~~v~~Fv---tHcGwnS~~Eai~~GVP~l~~P~~~-DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~  415 (472)
T PLN02670        341 MIHVGWVPQVKILS-HESVGGFL---THCGWNSVVEGLGFGRVLILFPVLN-EQGLNTRLLHGKKLGLEVPRDERDGSFT  415 (472)
T ss_pred             eEEeCcCCHHHHhc-Ccccceee---ecCCcchHHHHHHcCCCEEeCcchh-ccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence            55567777766532 12233355   2446689999999999999996311 1122333444455553221       13


Q ss_pred             HHHHHHHHHHhccC
Q psy15363        115 HKEYQDIAIRLGTD  128 (130)
Q Consensus       115 ~~~y~~~a~~l~~d  128 (130)
                      .++..+.+.++..|
T Consensus       416 ~e~i~~av~~vm~~  429 (472)
T PLN02670        416 SDSVAESVRLAMVD  429 (472)
T ss_pred             HHHHHHHHHHHhcC
Confidence            45555555555544

>PLN02554 UDP-glycosyltransferase family protein

Probab=96.14  E-value=0.018  Score=47.38  Aligned_cols=47  Identities=15%  Similarity=0.176  Sum_probs=32.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +|+.+.+++|..+++. ...+..|+   ..+|-++++||+++|+|+|+.+-
T Consensus       342 ~~g~v~~W~PQ~~iL~-H~~v~~Fv---tH~G~nS~~Ea~~~GVP~l~~P~  388 (481)
T PLN02554        342 DIGKVIGWAPQVAVLA-KPAIGGFV---THCGWNSILESLWFGVPMAAWPL  388 (481)
T ss_pred             cCceEEeeCCHHHHhC-CcccCccc---ccCccchHHHHHHcCCCEEecCc
Confidence            4555667777665542 24455555   23456799999999999999963

>PLN02208 glycosyltransferase family protein

Probab=96.06  E-value=0.047  Score=44.58  Aligned_cols=82  Identities=6%  Similarity=0.045  Sum_probs=46.5

Q ss_pred             CEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC--CchhhhhHHHH-HHhcCCCCcee-----
Q psy15363         41 RILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG--ETLASRVAASQ-LATLGCPELIA-----  112 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g--~~~~~r~~~~~-l~~~g~~~~va-----  112 (130)
                      .+++.+++|+.+++. ......|+   ..+|-++++||+++|+|+|+.+-  +..   ..+.+ .+..|+.--+.     
T Consensus       312 g~~v~~W~PQ~~iL~-H~~v~~Fv---tHcG~nS~~Eai~~GVP~l~~P~~~DQ~---~na~~~~~~~g~gv~~~~~~~~  384 (442)
T PLN02208        312 GVVWGGWVQQPLILD-HPSIGCFV---NHCGPGTIWESLVSDCQMVLIPFLSDQV---LFTRLMTEEFEVSVEVSREKTG  384 (442)
T ss_pred             CcEeeccCCHHHHhc-CCccCeEE---ccCCchHHHHHHHcCCCEEecCcchhhH---HHHHHHHHHhceeEEeccccCC
Confidence            455567777666543 12233455   23456899999999999999963  322   22233 23345543221     


Q ss_pred             -cCHHHHHHHHHHhccCC
Q psy15363        113 -RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus       113 -~~~~~y~~~a~~l~~d~  129 (130)
                       -+.++..+...++.+|+
T Consensus       385 ~~~~~~l~~ai~~~m~~~  402 (442)
T PLN02208        385 WFSKESLSNAIKSVMDKD  402 (442)
T ss_pred             cCcHHHHHHHHHHHhcCC
Confidence             14556666666666543

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=96.05  E-value=0.13  Score=42.13  Aligned_cols=78  Identities=21%  Similarity=0.278  Sum_probs=47.8

Q ss_pred             HHHHhhCCCcEEEEeecCcc-------c-HHH---HHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccE--EEcCCCCC
Q psy15363          4 IFVLKAVPNSILWLLKFPAV-------G-EAN---IQATAQALGLDQHRILFSNVAAKEEHVRRGQLADV--CLDTPLCN   70 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~-------~-~~~---l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv--~l~~~~~~   70 (130)
                      +.-+++.|.-.||.+..+..       . .+.   .+.+.++  +. +|..+.+++|..+++   +...+  |+   ..+
T Consensus       283 a~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~-~~g~v~~W~PQ~~iL---~h~~vg~fv---tH~  353 (455)
T PLN02152        283 ARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LE-EVGMIVSWCSQIEVL---RHRAVGCFV---THC  353 (455)
T ss_pred             HHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHh--cc-CCeEEEeeCCHHHHh---CCcccceEE---eeC
Confidence            45566677777777763110       0 001   1122222  33 677788889877654   45554  44   245


Q ss_pred             CchHHHHHHhcCCcEEecCC
Q psy15363         71 GHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        71 ~g~~~lEAla~G~PvV~~~g   90 (130)
                      |.++++||+++|+|+|+.+-
T Consensus       354 G~nS~~Ea~~~GvP~l~~P~  373 (455)
T PLN02152        354 GWSSSLESLVLGVPVVAFPM  373 (455)
T ss_pred             CcccHHHHHHcCCCEEeccc
Confidence            66899999999999999963

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=96.01  E-value=0.033  Score=42.97  Aligned_cols=87  Identities=15%  Similarity=-0.039  Sum_probs=54.6

Q ss_pred             HHHHHhhCC--CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          3 DIFVLKAVP--NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         3 w~~il~~~P--~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      |+++.+...  +.++++.++++.+++..++..+ . .  .++.+.|..+-.|+.++++.||+++.  ..+|  .+==|-+
T Consensus       199 ~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~-~-~--~~~~l~g~~sL~elaali~~a~l~I~--nDSG--p~HlA~A  270 (322)
T PRK10964        199 WRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAE-G-F--PYVEVLPKLSLEQVARVLAGAKAVVS--VDTG--LSHLTAA  270 (322)
T ss_pred             HHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHc-c-C--CcceecCCCCHHHHHHHHHhCCEEEe--cCCc--HHHHHHH
Confidence            555555442  4566665322234444444433 2 2  35778898898999999999999982  2222  2334778


Q ss_pred             cCCcEEecCCCchhhhh
Q psy15363         81 TGTPVVTLPGETLASRV   97 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~   97 (130)
                      +|+|+|++-|.....+.
T Consensus       271 ~g~p~valfGpt~p~~~  287 (322)
T PRK10964        271 LDRPNITLYGPTDPGLI  287 (322)
T ss_pred             hCCCEEEEECCCCcccc
Confidence            99999999776544443

>PLN02207 UDP-glycosyltransferase

Probab=95.98  E-value=0.036  Score=45.63  Aligned_cols=46  Identities=22%  Similarity=0.372  Sum_probs=32.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP   89 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~   89 (130)
                      +|+.+.+++|+.+++. ...+..|+   ..+|-++++||+++|+|+|+.+
T Consensus       332 ~~g~i~~W~PQ~~IL~-H~~vg~Fv---TH~GwnS~~Eai~~GVP~l~~P  377 (468)
T PLN02207        332 GRGMICGWSPQVEILA-HKAVGGFV---SHCGWNSIVESLWFGVPIVTWP  377 (468)
T ss_pred             CCeEEEEeCCHHHHhc-ccccceee---ecCccccHHHHHHcCCCEEecC
Confidence            5666667777766543 13344465   2345578999999999999996

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=95.96  E-value=0.08  Score=44.92  Aligned_cols=77  Identities=13%  Similarity=0.012  Sum_probs=56.7

Q ss_pred             CcEEEEeecCccc-------HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEc-CCC-C-CCchHHHHHHhc
Q psy15363         12 NSILWLLKFPAVG-------EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD-TPL-C-NGHTTSMDVLWT   81 (130)
Q Consensus        12 ~a~l~i~g~~~~~-------~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~-~~~-~-~~g~~~lEAla~   81 (130)
                      +..+++.|++.+.       .+.+.+++++-... +||.|+..-+..--..++..||++|. |+. + .+|++=+=||.-
T Consensus       424 pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~-~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n  502 (601)
T TIGR02094       424 PVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFR-GRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN  502 (601)
T ss_pred             CeEEEEEEecCcccchHHHHHHHHHHHHhcccCC-CCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc
Confidence            4889999975443       23344444433344 79999987775555567899999999 764 5 589999999999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |.+.++.-
T Consensus       503 GgL~~sv~  510 (601)
T TIGR02094       503 GVLNLSIL  510 (601)
T ss_pred             CCceeecc
Confidence            99999874

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PLN00414 glycosyltransferase family protein

Probab=95.86  E-value=0.056  Score=44.17  Aligned_cols=81  Identities=9%  Similarity=0.066  Sum_probs=45.3

Q ss_pred             EEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHH-HhcCCCCcee------cCH
Q psy15363         43 LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL-ATLGCPELIA------RTH  115 (130)
Q Consensus        43 ~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l-~~~g~~~~va------~~~  115 (130)
                      ++.+++|..+++. ...++.|+   ..+|-++++||+++|+|+|+.+--.- ....+.++ +..|..--+.      -+.
T Consensus       315 vv~~w~PQ~~vL~-h~~v~~fv---tH~G~nS~~Ea~~~GvP~l~~P~~~d-Q~~na~~~~~~~g~g~~~~~~~~~~~~~  389 (446)
T PLN00414        315 VWEGWVEQPLILS-HPSVGCFV---NHCGFGSMWESLVSDCQIVFIPQLAD-QVLITRLLTEELEVSVKVQREDSGWFSK  389 (446)
T ss_pred             EEeccCCHHHHhc-CCccceEE---ecCchhHHHHHHHcCCCEEecCcccc-hHHHHHHHHHHhCeEEEeccccCCccCH
Confidence            4446666655432 13345566   24566899999999999999974211 22233344 3445542221      245


Q ss_pred             HHHHHHHHHhccC
Q psy15363        116 KEYQDIAIRLGTD  128 (130)
Q Consensus       116 ~~y~~~a~~l~~d  128 (130)
                      ++..+...++..|
T Consensus       390 ~~i~~~v~~~m~~  402 (446)
T PLN00414        390 ESLRDTVKSVMDK  402 (446)
T ss_pred             HHHHHHHHHHhcC
Confidence            5665555555544

>PLN00164 glucosyltransferase; Provisional

Probab=95.83  E-value=0.19  Score=41.39  Aligned_cols=78  Identities=19%  Similarity=0.293  Sum_probs=42.5

Q ss_pred             EEEecCCCHHHHHHhhcccc--EEEcCCCCCCchHHHHHHhcCCcEEecCC--CchhhhhHHH-HHHhcCCCCcee----
Q psy15363         42 ILFSNVAAKEEHVRRGQLAD--VCLDTPLCNGHTTSMDVLWTGTPVVTLPG--ETLASRVAAS-QLATLGCPELIA----  112 (130)
Q Consensus        42 v~f~g~~~~~~~~~~~~~~D--v~l~~~~~~~g~~~lEAla~G~PvV~~~g--~~~~~r~~~~-~l~~~g~~~~va----  112 (130)
                      +++.+++|..+++   ...+  .|+   ..+|-++++||+++|+|+|+.+-  +..   .-+. +....|+.-.+.    
T Consensus       341 ~~v~~w~PQ~~iL---~h~~vg~fv---tH~GwnS~~Eai~~GVP~l~~P~~~DQ~---~Na~~~~~~~gvG~~~~~~~~  411 (480)
T PLN00164        341 LVWPTWAPQKEIL---AHAAVGGFV---THCGWNSVLESLWHGVPMAPWPLYAEQH---LNAFELVADMGVAVAMKVDRK  411 (480)
T ss_pred             eEEeecCCHHHHh---cCcccCeEE---eecccchHHHHHHcCCCEEeCCccccch---hHHHHHHHHhCeEEEeccccc
Confidence            3444555555443   3333  344   23456799999999999999963  322   1222 234455543221    


Q ss_pred             ----cCHHHHHHHHHHhccC
Q psy15363        113 ----RTHKEYQDIAIRLGTD  128 (130)
Q Consensus       113 ----~~~~~y~~~a~~l~~d  128 (130)
                          -+.++..+...++..|
T Consensus       412 ~~~~~~~e~l~~av~~vm~~  431 (480)
T PLN00164        412 RDNFVEAAELERAVRSLMGG  431 (480)
T ss_pred             cCCcCcHHHHHHHHHHHhcC
Confidence                1345555555566554

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=95.76  E-value=0.052  Score=47.33  Aligned_cols=78  Identities=17%  Similarity=0.089  Sum_probs=56.7

Q ss_pred             CcEEEEeecCccc----HH---HHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC--C-CCchHHHHHHhc
Q psy15363         12 NSILWLLKFPAVG----EA---NIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--C-NGHTTSMDVLWT   81 (130)
Q Consensus        12 ~a~l~i~g~~~~~----~~---~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~-~~g~~~lEAla~   81 (130)
                      ...+++.|+..|.    ++   .+.++++...+. +||.|+..-+..--..+++.|||+|.|+.  + .+|++=+=||.-
T Consensus       513 pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~-~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N  591 (778)
T cd04299         513 PVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFR-GRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN  591 (778)
T ss_pred             CeEEEEEEecCccchHHHHHHHHHHHHHhCcCCC-CcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc
Confidence            3889999964332    22   233334433454 79999988876555667899999999874  4 589999999999


Q ss_pred             CCcEEecCC
Q psy15363         82 GTPVVTLPG   90 (130)
Q Consensus        82 G~PvV~~~g   90 (130)
                      |.+-++.-.
T Consensus       592 G~LnlSvlD  600 (778)
T cd04299         592 GGLNLSVLD  600 (778)
T ss_pred             CCeeeeccc
Confidence            999998744

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=95.69  E-value=0.11  Score=33.32  Aligned_cols=77  Identities=12%  Similarity=0.047  Sum_probs=51.7

Q ss_pred             EEEeecCcccHHHHHHHHHHcCCCCCCEEE--ecCCCHH--HHHHhhccccEEEcCCCCCCch----HHHHHHhcCCcEE
Q psy15363         15 LWLLKFPAVGEANIQATAQALGLDQHRILF--SNVAAKE--EHVRRGQLADVCLDTPLCNGHT----TSMDVLWTGTPVV   86 (130)
Q Consensus        15 l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f--~g~~~~~--~~~~~~~~~Dv~l~~~~~~~g~----~~lEAla~G~PvV   86 (130)
                      ++++|+-......+++.++++|.  +.+.+  -+.....  .+...+..+|+.+-.-.+.+..    +--+|-..|+|++
T Consensus         2 vliVGG~~~~~~~~~~~~~~~G~--~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~   79 (97)
T PF10087_consen    2 VLIVGGREDRERRYKRILEKYGG--KLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPII   79 (97)
T ss_pred             EEEEcCCcccHHHHHHHHHHcCC--EEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEE
Confidence            46777423567889999999997  46666  1222233  4888889999997554443333    3456677899999


Q ss_pred             ecCCCch
Q psy15363         87 TLPGETL   93 (130)
Q Consensus        87 ~~~g~~~   93 (130)
                      ...+..+
T Consensus        80 ~~~~~~~   86 (97)
T PF10087_consen   80 YSRSRGV   86 (97)
T ss_pred             EECCCCH
Confidence            9876544

>PLN02764 glycosyltransferase family protein

Probab=95.65  E-value=0.079  Score=43.46  Aligned_cols=82  Identities=10%  Similarity=0.094  Sum_probs=47.2

Q ss_pred             EEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHH-HhcCCCCcee------cC
Q psy15363         42 ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL-ATLGCPELIA------RT  114 (130)
Q Consensus        42 v~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l-~~~g~~~~va------~~  114 (130)
                      +++.+++|..+++. ...+..|+   ..+|-++++||+++|+|+|+.+--. -....+.++ +..|+.--+.      -+
T Consensus       319 ~v~~~W~PQ~~vL~-h~~v~~Fv---tH~G~nS~~Eal~~GVP~l~~P~~~-DQ~~na~~l~~~~g~gv~~~~~~~~~~~  393 (453)
T PLN02764        319 VVWGGWVQQPLILS-HPSVGCFV---SHCGFGSMWESLLSDCQIVLVPQLG-DQVLNTRLLSDELKVSVEVAREETGWFS  393 (453)
T ss_pred             cEEeCCCCHHHHhc-CcccCeEE---ecCCchHHHHHHHcCCCEEeCCccc-chHHHHHHHHHHhceEEEeccccCCccC
Confidence            44457777766543 23355566   2456689999999999999997421 122223333 3344432111      15


Q ss_pred             HHHHHHHHHHhccC
Q psy15363        115 HKEYQDIAIRLGTD  128 (130)
Q Consensus       115 ~~~y~~~a~~l~~d  128 (130)
                      .++..+...++.+|
T Consensus       394 ~e~i~~av~~vm~~  407 (453)
T PLN02764        394 KESLRDAINSVMKR  407 (453)
T ss_pred             HHHHHHHHHHHhcC
Confidence            56666666666655

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=95.39  E-value=0.57  Score=37.33  Aligned_cols=82  Identities=13%  Similarity=0.047  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHcCCCCCCEEE-ecCCCHHHHHHhhccccEEEcCCCCC-CchHHHHHHhcCCcEEecCCCchhhhhHHHHH
Q psy15363         25 EANIQATAQALGLDQHRILF-SNVAAKEEHVRRGQLADVCLDTPLCN-GHTTSMDVLWTGTPVVTLPGETLASRVAASQL  102 (130)
Q Consensus        25 ~~~l~~~~~~~g~~~~rv~f-~g~~~~~~~~~~~~~~Dv~l~~~~~~-~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l  102 (130)
                      .+.+++..+++--+ +++.. ...+|.+||.++++.||+.+..+.-- +--+++=.+.+|+||+......+     ...+
T Consensus       231 i~~V~~~~~~lF~~-~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~~np~-----~~~l  304 (360)
T PF07429_consen  231 IQQVIQAGKELFGA-ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSRDNPF-----WQDL  304 (360)
T ss_pred             HHHHHHHHHHhcCc-cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEecCChH-----HHHH
Confidence            45566666665332 67765 57999999999999999999777543 33357889999999998765433     3445


Q ss_pred             HhcCCCCcee
Q psy15363        103 ATLGCPELIA  112 (130)
Q Consensus       103 ~~~g~~~~va  112 (130)
                      ...|++=+..
T Consensus       305 ~~~~ipVlf~  314 (360)
T PF07429_consen  305 KEQGIPVLFY  314 (360)
T ss_pred             HhCCCeEEec
Confidence            5667765544

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=95.31  E-value=0.29  Score=38.23  Aligned_cols=56  Identities=18%  Similarity=0.138  Sum_probs=35.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhh
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRV   97 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~   97 (130)
                      ..+.|...-+..=|..+|..||.++-|-  .+-+.+.||.+.|+||-+.+-+.-.+|+
T Consensus       209 ~~~~~~~~~~~nPy~~~La~ad~i~VT~--DSvSMvsEA~~tG~pV~v~~l~~~~~r~  264 (311)
T PF06258_consen  209 PGVYIWDGTGENPYLGFLAAADAIVVTE--DSVSMVSEAAATGKPVYVLPLPGRSGRF  264 (311)
T ss_pred             CceEEecCCCCCcHHHHHHhCCEEEEcC--ccHHHHHHHHHcCCCEEEecCCCcchHH
Confidence            4553333333333667777888887443  2346689999999999988654433343

The function of this family is unknown.

>PLN02534 UDP-glycosyltransferase

Probab=94.76  E-value=0.092  Score=43.49  Aligned_cols=45  Identities=18%  Similarity=0.320  Sum_probs=33.8

Q ss_pred             CCEEEecCCCHHHHHHhhccccE--EEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADV--CLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv--~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      .++++.+++|..+++   ...++  |+   ..+|.++++||+++|+|+|+.+-
T Consensus       344 ~g~~v~~w~pq~~iL---~h~~v~~fv---tH~G~ns~~ea~~~GvP~v~~P~  390 (491)
T PLN02534        344 RGLLIKGWAPQVLIL---SHPAIGGFL---THCGWNSTIEGICSGVPMITWPL  390 (491)
T ss_pred             CCeeccCCCCHHHHh---cCCccceEE---ecCccHHHHHHHHcCCCEEeccc
Confidence            567777888876643   45555  44   34567899999999999999975

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=94.60  E-value=0.2  Score=39.29  Aligned_cols=82  Identities=16%  Similarity=0.079  Sum_probs=58.0

Q ss_pred             cHHHHHHHHHHcCCCCCCEEE-ecCCCHHHHHHhhccccEEEcCCCCC-CchHHHHHHhcCCcEEecCCCchhhhhHHHH
Q psy15363         24 GEANIQATAQALGLDQHRILF-SNVAAKEEHVRRGQLADVCLDTPLCN-GHTTSMDVLWTGTPVVTLPGETLASRVAASQ  101 (130)
Q Consensus        24 ~~~~l~~~~~~~g~~~~rv~f-~g~~~~~~~~~~~~~~Dv~l~~~~~~-~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~  101 (130)
                      +.+.+++..+++--. +++.. ...+|.+|+.++++.||+....+.-- +--+++=.+..|+||+.....++     ...
T Consensus       191 Yi~~V~~~~~~lF~~-~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n~f-----wqd  264 (322)
T PRK02797        191 YIEEVRQAGLALFGA-ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDNPF-----WQD  264 (322)
T ss_pred             HHHHHHHHHHHhcCc-ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCCch-----HHH
Confidence            345666776766543 67665 57789999999999999998776543 33357789999999998765433     334


Q ss_pred             HHhcCCCCce
Q psy15363        102 LATLGCPELI  111 (130)
Q Consensus       102 l~~~g~~~~v  111 (130)
                      +.+.|++-+.
T Consensus       265 l~e~gv~Vlf  274 (322)
T PRK02797        265 LTEQGLPVLF  274 (322)
T ss_pred             HHhCCCeEEe
Confidence            5567777643

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=94.44  E-value=0.047  Score=46.19  Aligned_cols=66  Identities=17%  Similarity=0.111  Sum_probs=38.3

Q ss_pred             HHHHHHHHHcCCC---CCC--EEEecCC-C------HHHHHHhhccccEEEcCCCC-CCchHHHHHHhcCCcEEecCCC
Q psy15363         26 ANIQATAQALGLD---QHR--ILFSNVA-A------KEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        26 ~~l~~~~~~~g~~---~~r--v~f~g~~-~------~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~G~PvV~~~g~   91 (130)
                      +.+-..+++.|+.   .||  |+|.+.. +      .-++..+++.||+.+.|+.| .-|-|-+|+.++|+|.||++=.
T Consensus       424 DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLs  502 (633)
T PF05693_consen  424 DPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLS  502 (633)
T ss_dssp             -HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTB
T ss_pred             CHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccch
Confidence            4556666777653   255  5665531 1      23455667899999999865 4789999999999999998643

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=94.15  E-value=0.73  Score=35.08  Aligned_cols=57  Identities=19%  Similarity=0.163  Sum_probs=42.3

Q ss_pred             cCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCc
Q psy15363         46 NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPEL  110 (130)
Q Consensus        46 g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~  110 (130)
                      ...+.+|+...++.||+++.+.-    -.++=|+.+|+|+|....+    .=..++++.+|++.+
T Consensus       237 ~~~~~~e~~~~i~~~~~vI~~Rl----H~~I~A~~~gvP~i~i~y~----~K~~~~~~~~g~~~~  293 (298)
T TIGR03609       237 SPLDPEELLGLFASARLVIGMRL----HALILAAAAGVPFVALSYD----PKVRAFAADAGVPGF  293 (298)
T ss_pred             ecCCHHHHHHHHhhCCEEEEech----HHHHHHHHcCCCEEEeecc----HHHHHHHHHhCCCcc
Confidence            44566788889999998884432    2478899999999988532    234678888898875

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=93.72  E-value=0.68  Score=36.17  Aligned_cols=72  Identities=22%  Similarity=0.163  Sum_probs=50.4

Q ss_pred             cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCc
Q psy15363         13 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET   92 (130)
Q Consensus        13 a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~   92 (130)
                      .++++.|++ .+.+..++..+.++-   -+.+.|..+-.++.+++..||+++  ...+|.  +==|-|.|+|+|+.-|..
T Consensus       209 ~~Vvl~g~~-~e~e~~~~i~~~~~~---~~~l~~k~sL~e~~~li~~a~l~I--~~DSg~--~HlAaA~~~P~I~iyg~t  280 (334)
T COG0859         209 YQVVLFGGP-DEEERAEEIAKGLPN---AVILAGKTSLEELAALIAGADLVI--GNDSGP--MHLAAALGTPTIALYGPT  280 (334)
T ss_pred             CEEEEecCh-HHHHHHHHHHHhcCC---ccccCCCCCHHHHHHHHhcCCEEE--ccCChH--HHHHHHcCCCEEEEECCC
Confidence            577788853 555566666665542   233889999999999999999997  222221  233678999999997654

>PLN03015 UDP-glucosyl transferase

Probab=93.16  E-value=0.52  Score=38.92  Aligned_cols=45  Identities=20%  Similarity=0.305  Sum_probs=31.8

Q ss_pred             EEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         42 ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        42 v~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +++.+++|..+++. ...+-.|+.   .+|-++++||+++|+|+|+.+-
T Consensus       337 l~v~~W~PQ~~vL~-h~~vg~fvt---H~GwnS~~Eai~~GvP~v~~P~  381 (470)
T PLN03015        337 LVVTQWAPQVEILS-HRSIGGFLS---HCGWSSVLESLTKGVPIVAWPL  381 (470)
T ss_pred             eEEEecCCHHHHhc-cCccCeEEe---cCCchhHHHHHHcCCCEEeccc
Confidence            56668888777654 233444552   3455799999999999999963

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=93.06  E-value=0.7  Score=35.35  Aligned_cols=73  Identities=18%  Similarity=0.184  Sum_probs=55.2

Q ss_pred             CCcEEEEeecCccc-HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         11 PNSILWLLKFPAVG-EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        11 P~a~l~i~g~~~~~-~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      |-..++++..+.++ .-++-+-++.+|++..|..|++--+...|+..+ .+|+||.+-+    .-+-+|+.+|.|--+.
T Consensus        35 ~~VEVVllSRNspdTGlRv~nSI~hygL~ItR~~ft~G~~~~~Yl~af-~v~LFLSan~----~DV~~Ai~~G~~Aa~v  108 (264)
T PF06189_consen   35 PLVEVVLLSRNSPDTGLRVFNSIRHYGLDITRAAFTGGESPYPYLKAF-NVDLFLSANE----DDVQEAIDAGIPAATV  108 (264)
T ss_pred             CceEEEEEecCCHHHHHHHHHhHHHhCCcceeeeecCCCCHHHHHHHh-CCceEeeCCH----HHHHHHHHcCCCcEEe
Confidence            44666777764332 225667789999999999999888877777766 6899996554    5699999999996554

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal)

Probab=92.64  E-value=0.59  Score=34.26  Aligned_cols=76  Identities=14%  Similarity=0.124  Sum_probs=49.9

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEec-CCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSN-VAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g-~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      ...++++|........+++.+++.|...-.=+|+| ..+.... .-++.=|+.+-+-|..-...+.||..+|+|+|+.
T Consensus        61 ~~~ILfVgtk~~~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~-~~~~~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai  137 (196)
T TIGR01012        61 PEDILVVSARIYGQKPVLKFAKVTGARAIAGRFTPGTFTNPMQ-KAFREPEVVVVTDPRADHQALKEASEVGIPIVAL  137 (196)
T ss_pred             CCeEEEEecCHHHHHHHHHHHHHhCCceECCeeCCCCCCCccc-cccCCCCEEEEECCccccHHHHHHHHcCCCEEEE
Confidence            56778888754456667777777664321224554 3343221 2356777776555666678999999999999987

TIGR01011 describes the related protein of organelles and bacteria.

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=92.62  E-value=0.19  Score=41.47  Aligned_cols=83  Identities=17%  Similarity=0.139  Sum_probs=46.6

Q ss_pred             hHHHHHhhCCC----cEEEEeecCc----cc----HHHHHHHH----HHcCCC-CCCEEEe-cCCCHHHHHHhhccccEE
Q psy15363          2 SDIFVLKAVPN----SILWLLKFPA----VG----EANIQATA----QALGLD-QHRILFS-NVAAKEEHVRRGQLADVC   63 (130)
Q Consensus         2 ~w~~il~~~P~----a~l~i~g~~~----~~----~~~l~~~~----~~~g~~-~~rv~f~-g~~~~~~~~~~~~~~Dv~   63 (130)
                      +|.+.|+++|+    ..|+-++.+.    +.    ++.+.+++    .++|-. ..-|.+. +.++.+++.++|+.||++
T Consensus       297 Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~  376 (474)
T PF00982_consen  297 AFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVA  376 (474)
T ss_dssp             HHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEE
T ss_pred             HHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhE
Confidence            68889999996    4555555321    11    22333332    245643 1246665 458999999999999999


Q ss_pred             EcCCC-CCCchHHHHHHhcCCc
Q psy15363         64 LDTPL-CNGHTTSMDVLWTGTP   84 (130)
Q Consensus        64 l~~~~-~~~g~~~lEAla~G~P   84 (130)
                      |.|+. .|.-++..|..+|-.+
T Consensus       377 lvTslrDGmNLva~Eyva~q~~  398 (474)
T PF00982_consen  377 LVTSLRDGMNLVAKEYVACQDD  398 (474)
T ss_dssp             EE--SSBS--HHHHHHHHHS-T
T ss_pred             EecchhhccCCcceEEEEEecC
Confidence            98875 5668899999999876

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]

Probab=92.55  E-value=2.8  Score=33.86  Aligned_cols=66  Identities=20%  Similarity=0.219  Sum_probs=49.0

Q ss_pred             CCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee
Q psy15363         39 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA  112 (130)
Q Consensus        39 ~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va  112 (130)
                      .+++.+..-...+++...++.+|+.+-+--    -+++=|++.|+|+|+..-+    .=...+++.+|++++.-
T Consensus       265 ~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~----HsaI~al~~g~p~i~i~Y~----~K~~~l~~~~gl~~~~~  330 (385)
T COG2327         265 SAEILVSSDEYAEELGGILAACDLIVGMRL----HSAIMALAFGVPAIAIAYD----PKVRGLMQDLGLPGFAI  330 (385)
T ss_pred             ccceEeecchHHHHHHHHhccCceEEeehh----HHHHHHHhcCCCeEEEeec----HHHHHHHHHcCCCcccc
Confidence            378888764444567779999999984432    3588899999999998643    22457889999998764

>PRK10494 hypothetical protein; Provisional

Probab=92.55  E-value=0.84  Score=34.71  Aligned_cols=89  Identities=19%  Similarity=0.107  Sum_probs=62.2

Q ss_pred             HHHhhCCCcEEEEeecCcc-----cHHHHHHHHHHcCCCCCCEEEecCCC--HHHH---HHhhccccEEEcCCCCCCchH
Q psy15363          5 FVLKAVPNSILWLLKFPAV-----GEANIQATAQALGLDQHRILFSNVAA--KEEH---VRRGQLADVCLDTPLCNGHTT   74 (130)
Q Consensus         5 ~il~~~P~a~l~i~g~~~~-----~~~~l~~~~~~~g~~~~rv~f~g~~~--~~~~---~~~~~~~Dv~l~~~~~~~g~~   74 (130)
                      ++.++.|+.++++-|+.+.     +-+..++.+.++|+++++++..+...  .++.   ..++..-.+.|-|+.+.-.-+
T Consensus       114 ~L~r~~~~~~ii~SGg~~~~~~~sEA~~~~~~l~~lGVp~~~Ii~e~~s~nT~eNa~~~~~~~~~~~iiLVTsa~Hm~RA  193 (259)
T PRK10494        114 RLWRANPGAKLIFTGGAAKTNTVSTAEVGARVAQSLGVPREDIITLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRA  193 (259)
T ss_pred             HHHHhCCCCEEEEECCCCCCCCCCHHHHHHHHHHHcCCCHHHeeeCCCCCCHHHHHHHHHHHhCCCCEEEECCHHHHHHH
Confidence            4567789999988885431     23466778899999977888866543  3332   333344458888888876666


Q ss_pred             HHHHHhcCCcEEecCCCch
Q psy15363         75 SMDVLWTGTPVVTLPGETL   93 (130)
Q Consensus        75 ~lEAla~G~PvV~~~g~~~   93 (130)
                      ...+-..|+.|+..+.++.
T Consensus       194 ~~~f~~~Gl~v~p~Ptd~~  212 (259)
T PRK10494        194 MIFFQQEGLNPLPAPANQL  212 (259)
T ss_pred             HHHHHHcCCceeecCCcce
Confidence            7777778999998876643

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=91.66  E-value=0.21  Score=33.54  Aligned_cols=39  Identities=21%  Similarity=0.065  Sum_probs=25.1

Q ss_pred             HHHHHhhccccEEEcCC-CCCCchHHHHHHhcCCcEEecC
Q psy15363         51 EEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVTLP   89 (130)
Q Consensus        51 ~~~~~~~~~~Dv~l~~~-~~~~g~~~lEAla~G~PvV~~~   89 (130)
                      +++...+..+|+.+|-+ |...-.-+-.++..|+|+|+-.
T Consensus        59 ~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGT   98 (124)
T PF01113_consen   59 DDLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGT   98 (124)
T ss_dssp             S-HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-
T ss_pred             hhHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEEC
Confidence            34667777899999854 5444445667788899999743

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG1192|consensus

Probab=91.47  E-value=0.32  Score=39.41  Aligned_cols=50  Identities=16%  Similarity=0.421  Sum_probs=33.6

Q ss_pred             CEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecC--CCch
Q psy15363         41 RILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP--GETL   93 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~--g~~~   93 (130)
                      +|.+.+++|..+++.-......|+   ..+|=++++|++.+|+|+|+.+  ++.+
T Consensus       336 nV~~~~W~PQ~~lll~H~~v~~Fv---THgG~nSt~E~~~~GvP~v~~Plf~DQ~  387 (496)
T KOG1192|consen  336 NVVLSKWAPQNDLLLDHPAVGGFV---THGGWNSTLESIYSGVPMVCVPLFGDQP  387 (496)
T ss_pred             ceEEecCCCcHHHhcCCCcCcEEE---ECCcccHHHHHHhcCCceecCCccccch
Confidence            588889999887651223345555   1334466799999999999764  4544

>PTZ00254 40S ribosomal protein SA; Provisional

Probab=91.09  E-value=0.67  Score=35.22  Aligned_cols=77  Identities=14%  Similarity=0.154  Sum_probs=48.5

Q ss_pred             CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe-cCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         10 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        10 ~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~-g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      .|+- ++++|........+++.++..|...-.=+|+ |..+.. ....+..=|+.+-+-|..-...+.||-.+|+|||++
T Consensus        70 ~~~~-Il~Vstr~~~~~~V~k~A~~tg~~~i~~Rw~pGtlTN~-~~~~f~~P~llIV~Dp~~d~qAI~EA~~lnIPvIal  147 (249)
T PTZ00254         70 NPAD-VVVVSSRPYGQRAVLKFAQYTGASAIAGRFTPGTFTNQ-IQKKFMEPRLLIVTDPRTDHQAIREASYVNIPVIAL  147 (249)
T ss_pred             CCCc-EEEEEcCHHHHHHHHHHHHHhCCeEECCcccCCCCCCc-cccccCCCCEEEEeCCCcchHHHHHHHHhCCCEEEE
Confidence            3544 5577764445667777777776432111344 333432 223456677776555666678999999999999987

>PRK04020 rps2P 30S ribosomal protein S2; Provisional

Probab=91.03  E-value=1.2  Score=32.93  Aligned_cols=77  Identities=17%  Similarity=0.157  Sum_probs=48.9

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe-cCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~-g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      .+-.++++|.....+..+++.+++.|...-.=+|+ |..+.... ..+..=|+.+-.-|..-...+.||.-.|+|||+.
T Consensus        66 ~~~~ILfVgTk~~~~~~v~k~A~~~g~~~v~~RWlgG~LTN~~~-~~~~~Pdliiv~dp~~~~~AI~EA~kl~IP~Iai  143 (204)
T PRK04020         66 EPEKILVVSSRQYGQKPVQKFAEVVGAKAITGRFIPGTLTNPSL-KGYIEPDVVVVTDPRGDAQAVKEAIEVGIPVVAL  143 (204)
T ss_pred             cCCeEEEEeCCHHHHHHHHHHHHHhCCeeecCccCCCcCcCcch-hccCCCCEEEEECCcccHHHHHHHHHhCCCEEEE
Confidence            44567788875445667777777776431111344 34443332 2344666665445555678999999999999987

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=90.88  E-value=0.59  Score=39.32  Aligned_cols=88  Identities=10%  Similarity=0.057  Sum_probs=57.0

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEc-CCCCCCchHHHHHHhcCCcEEecCCCchhhhhHH----------------HHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLD-TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA----------------SQL  102 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~-~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~----------------~~l  102 (130)
                      +-|.=.|.++++|+..+++.+-||+- -||+. |-+-+||+++|+|-|-..-....+|...                -.+
T Consensus       322 ~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~E-gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~  400 (559)
T PF15024_consen  322 SFVKNHGILSGDEFQQLLRKAKVFIGLGFPYE-GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYA  400 (559)
T ss_pred             hhhhhcCcCCHHHHHHHHHhhhEeeecCCCCC-CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHH
Confidence            34555677899999999999999985 36776 4568999999999886542222222111                112


Q ss_pred             H-hcCCCC---ceecCHHHHHHHHHHhccC
Q psy15363        103 A-TLGCPE---LIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus       103 ~-~~g~~~---~va~~~~~y~~~a~~l~~d  128 (130)
                      . .+|-|-   +-.+|.+++.+.+.+.+++
T Consensus       401 e~~iG~PhVytVd~~n~~~v~~Avk~il~~  430 (559)
T PF15024_consen  401 EEFIGEPHVYTVDINNSTEVEAAVKAILAT  430 (559)
T ss_pred             HhhCCCCeEEEEcCCCHHHHHHHHHHHHhc
Confidence            2 356654   2235677777766666554

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=90.82  E-value=1.4  Score=36.58  Aligned_cols=83  Identities=12%  Similarity=0.066  Sum_probs=55.0

Q ss_pred             hHHHHHhhCCC----cEEEEeecCc----cc----HHHHHHHHH----HcCCC-CCCEEEe-cCCCHHHHHHhhccccEE
Q psy15363          2 SDIFVLKAVPN----SILWLLKFPA----VG----EANIQATAQ----ALGLD-QHRILFS-NVAAKEEHVRRGQLADVC   63 (130)
Q Consensus         2 ~w~~il~~~P~----a~l~i~g~~~----~~----~~~l~~~~~----~~g~~-~~rv~f~-g~~~~~~~~~~~~~~Dv~   63 (130)
                      +|.+.|+++|+    ..|+-+..+.    +.    +..+.+.+.    ++|-. ..-|+++ ..++++++.++|+.|||+
T Consensus       276 Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~  355 (474)
T PRK10117        276 AYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVG  355 (474)
T ss_pred             HHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEE
Confidence            68889999995    5566666421    11    223333322    34532 1126655 557899999999999999


Q ss_pred             EcCC-CCCCchHHHHHHhcCCc
Q psy15363         64 LDTP-LCNGHTTSMDVLWTGTP   84 (130)
Q Consensus        64 l~~~-~~~~g~~~lEAla~G~P   84 (130)
                      |.|+ ..|.-.+.-|..+|-.|
T Consensus       356 lVTplRDGMNLVAkEyva~q~~  377 (474)
T PRK10117        356 LVTPLRDGMNLVAKEYVAAQDP  377 (474)
T ss_pred             EecccccccccccchheeeecC
Confidence            8776 45667899999999653

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=90.81  E-value=1.5  Score=38.92  Aligned_cols=82  Identities=17%  Similarity=0.148  Sum_probs=55.0

Q ss_pred             hHHHHHhhCCCc----EEEEeecCc----ccHH----HHHHHH----HHcCCC-CCCEEEe-cCCCHHHHHHhhccccEE
Q psy15363          2 SDIFVLKAVPNS----ILWLLKFPA----VGEA----NIQATA----QALGLD-QHRILFS-NVAAKEEHVRRGQLADVC   63 (130)
Q Consensus         2 ~w~~il~~~P~a----~l~i~g~~~----~~~~----~l~~~~----~~~g~~-~~rv~f~-g~~~~~~~~~~~~~~Dv~   63 (130)
                      +|.+.|+++|+.    .|+-+..+.    .+.+    .+.+.+    .++|-. ..-|+++ ..++.+++.++|+.||++
T Consensus       360 A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~  439 (854)
T PLN02205        360 AMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECC  439 (854)
T ss_pred             HHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEE
Confidence            678899999964    566665431    1112    222322    244532 2347776 557999999999999999


Q ss_pred             EcCCC-CCCchHHHHHHhcCC
Q psy15363         64 LDTPL-CNGHTTSMDVLWTGT   83 (130)
Q Consensus        64 l~~~~-~~~g~~~lEAla~G~   83 (130)
                      |.|+- .+.-.+..|-.+|-.
T Consensus       440 lVT~lRDGMNLva~Eyia~~~  460 (854)
T PLN02205        440 LVTAVRDGMNLIPYEYIISRQ  460 (854)
T ss_pred             EeccccccccccchheeEEcc
Confidence            88774 555778999998854

>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria

Probab=90.61  E-value=1.7  Score=28.32  Aligned_cols=63  Identities=16%  Similarity=0.127  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH--hcCCcEEecCCC
Q psy15363         25 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL--WTGTPVVTLPGE   91 (130)
Q Consensus        25 ~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl--a~G~PvV~~~g~   91 (130)
                      .+.+++.++++|++   +.+. ..+..++......+|++|-+.....-..-++..  ..|+||...+..
T Consensus        17 a~km~~~a~~~gi~---~~i~-a~~~~e~~~~~~~~Dvill~PQv~~~~~~i~~~~~~~~ipv~~I~~~   81 (99)
T cd05565          17 ANALNKGAKERGVP---LEAA-AGAYGSHYDMIPDYDLVILAPQMASYYDELKKDTDRLGIKLVTTTGK   81 (99)
T ss_pred             HHHHHHHHHHCCCc---EEEE-EeeHHHHHHhccCCCEEEEcChHHHHHHHHHHHhhhcCCCEEEeCHH
Confidence            56889999999995   3332 445566777788899998666543333334433  448999998754

In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=90.58  E-value=2.4  Score=32.49  Aligned_cols=79  Identities=15%  Similarity=0.052  Sum_probs=52.9

Q ss_pred             HHHHHhhCCC-cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC-CCCCchHHHHHHh
Q psy15363          3 DIFVLKAVPN-SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLW   80 (130)
Q Consensus         3 w~~il~~~P~-a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~~~~g~~~lEAla   80 (130)
                      +...+.+.++ ..++-+.+  ...++.++.++++|+.      ..+.+.+++++ -...|++.-.. +....-.++.|+.
T Consensus        19 ~~~~~~~~~~~~~~vav~d--~~~~~a~~~a~~~~~~------~~~~~~~~ll~-~~~iD~V~Iatp~~~H~e~~~~AL~   89 (342)
T COG0673          19 HLPALAALGGGLELVAVVD--RDPERAEAFAEEFGIA------KAYTDLEELLA-DPDIDAVYIATPNALHAELALAALE   89 (342)
T ss_pred             hHHHHHhCCCceEEEEEec--CCHHHHHHHHHHcCCC------cccCCHHHHhc-CCCCCEEEEcCCChhhHHHHHHHHh
Confidence            5567777787 46666654  4567788899999984      22334455543 12278885444 4455667899999


Q ss_pred             cCCcEEecCC
Q psy15363         81 TGTPVVTLPG   90 (130)
Q Consensus        81 ~G~PvV~~~g   90 (130)
                      .|++|++-+-
T Consensus        90 aGkhVl~EKP   99 (342)
T COG0673          90 AGKHVLCEKP   99 (342)
T ss_pred             cCCEEEEcCC
Confidence            9999999653

>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P

Probab=90.47  E-value=1.5  Score=35.30  Aligned_cols=81  Identities=15%  Similarity=0.151  Sum_probs=53.6

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHH----HcC----CCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQ----ALG----LDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTT   74 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~----~~g----~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~   74 (130)
                      |-+.+++.+....+++.. |...+.+++++.    +.|    -..=++.++++++.+++-.++..||+-.    --|=-+
T Consensus       200 ll~~~~~~~~pv~llvp~-g~~~~~~~~~~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~Nf----VRGEDS  274 (374)
T PF10093_consen  200 LLDAWAASPKPVHLLVPE-GRALNSLAAWLGDALLQAGDSWQRGNLTLHVLPFVPQDDYDRLLWACDFNF----VRGEDS  274 (374)
T ss_pred             HHHHHhcCCCCeEEEecC-CccHHHHHHHhccccccCccccccCCeEEEECCCCCHHHHHHHHHhCccce----EecchH
Confidence            334445556555555553 455566655553    111    1113688899999999999999999865    223356


Q ss_pred             HHHHHhcCCcEEec
Q psy15363         75 SMDVLWTGTPVVTL   88 (130)
Q Consensus        75 ~lEAla~G~PvV~~   88 (130)
                      .+-|.++|+|-|=.
T Consensus       275 fVRAqwAgkPFvWh  288 (374)
T PF10093_consen  275 FVRAQWAGKPFVWH  288 (374)
T ss_pred             HHHHHHhCCCceEe
Confidence            78999999999943

The function is unknown.

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=90.45  E-value=2.8  Score=31.96  Aligned_cols=76  Identities=16%  Similarity=0.106  Sum_probs=50.9

Q ss_pred             CCEEEecCCCHHHHHHhhcc--ccEEEcC-CCCC---CchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee-
Q psy15363         40 HRILFSNVAAKEEHVRRGQL--ADVCLDT-PLCN---GHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA-  112 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~--~Dv~l~~-~~~~---~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va-  112 (130)
                      ..+++.|+...+++..+++.  .|+.+|. .||.   +-+.+-=|--.|+|.+-+.-..+..          .-+.|+. 
T Consensus        45 ~~~~~~G~l~~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eRP~~~~----------~gd~~~~V  114 (257)
T COG2099          45 GPVRVGGFLGAEGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETGIPYLRLERPPWAP----------NGDNWIEV  114 (257)
T ss_pred             CCeeecCcCCHHHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEECCcccc----------CCCceEEe
Confidence            46889999999999998866  8889995 5785   3455556667899999885443322          1123332 


Q ss_pred             cCHHHHHHHHHHh
Q psy15363        113 RTHKEYQDIAIRL  125 (130)
Q Consensus       113 ~~~~~y~~~a~~l  125 (130)
                      .|.++-++.+.++
T Consensus       115 ~d~~ea~~~~~~~  127 (257)
T COG2099         115 ADIEEAAEAAKQL  127 (257)
T ss_pred             cCHHHHHHHHhcc
Confidence            5666666655544

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=90.43  E-value=6.3  Score=35.84  Aligned_cols=84  Identities=11%  Similarity=0.033  Sum_probs=55.1

Q ss_pred             HHHHHhhCCCcE------------EEEeecCcccHHHHHHHHHHc-CCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC
Q psy15363          3 DIFVLKAVPNSI------------LWLLKFPAVGEANIQATAQAL-GLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC   69 (130)
Q Consensus         3 w~~il~~~P~a~------------l~i~g~~~~~~~~l~~~~~~~-g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~   69 (130)
                      .++.+.+.|++.            ++.+++  ...+..+++++.+ ++.  -+. +...+.+++.++++.+|+++...|.
T Consensus       584 ~a~~La~~~~~~~~~~~~~~~~~~lV~VaD--~~~~~a~~la~~~~~~~--~v~-lDv~D~e~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        584 AAEYLASVKTISYYGDDSEEPTDVHVIVAS--LYLKDAKETVEGIENAE--AVQ-LDVSDSESLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHHHHHhCcCccccccccccccccEEEEEC--CCHHHHHHHHHhcCCCc--eEE-eecCCHHHHHHhhcCCCEEEECCCc
Confidence            345666667655            556664  3344556666654 321  122 2234567888888899999987776


Q ss_pred             C-CchHHHHHHhcCCcEEecCCC
Q psy15363         70 N-GHTTSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        70 ~-~g~~~lEAla~G~PvV~~~g~   91 (130)
                      . ....+..|+..|+++|+....
T Consensus       659 ~~H~~VAkaAieaGkHvv~eky~  681 (1042)
T PLN02819        659 SCHAVVAKACIELKKHLVTASYV  681 (1042)
T ss_pred             hhhHHHHHHHHHcCCCEEECcCC
Confidence            5 466788899999999998743

>TIGR01761 thiaz-red thiazolinyl imide reductase

Probab=90.06  E-value=2.5  Score=33.55  Aligned_cols=89  Identities=19%  Similarity=0.118  Sum_probs=56.4

Q ss_pred             hHHHHHhhCC-CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEE--Ec-CC-C-CCCchHH
Q psy15363          2 SDIFVLKAVP-NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC--LD-TP-L-CNGHTTS   75 (130)
Q Consensus         2 ~w~~il~~~P-~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~--l~-~~-~-~~~g~~~   75 (130)
                      .+.+.+.+.| ++.|+-+.+  ...++.++.++++|+.       .+.+.+++.   ...|+.  .- +. | ....-.+
T Consensus        16 ~h~~al~~~~~~~eLvaV~d--~~~erA~~~A~~~gi~-------~y~~~eell---~d~Di~~V~ipt~~P~~~H~e~a   83 (343)
T TIGR01761        16 FYLAAFAAAPERFELAGILA--QGSERSRALAHRLGVP-------LYCEVEELP---DDIDIACVVVRSAIVGGQGSALA   83 (343)
T ss_pred             HHHHHHHhCCCCcEEEEEEc--CCHHHHHHHHHHhCCC-------ccCCHHHHh---cCCCEEEEEeCCCCCCccHHHHH
Confidence            3556677788 899888775  3456778889999873       234556665   344444  22 22 2 3445678


Q ss_pred             HHHHhcCCcEEecCCCchhhhhHHHHHHh
Q psy15363         76 MDVLWTGTPVVTLPGETLASRVAASQLAT  104 (130)
Q Consensus        76 lEAla~G~PvV~~~g~~~~~r~~~~~l~~  104 (130)
                      .+|+..|+.|++-+--  ...-...+++.
T Consensus        84 ~~aL~aGkHVL~EKPl--a~~Ea~el~~~  110 (343)
T TIGR01761        84 RALLARGIHVLQEHPL--HPRDIQDLLRL  110 (343)
T ss_pred             HHHHhCCCeEEEcCCC--CHHHHHHHHHH
Confidence            9999999999996432  23334444433

This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).

>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis

Probab=90.02  E-value=1.2  Score=30.68  Aligned_cols=92  Identities=22%  Similarity=0.185  Sum_probs=54.3

Q ss_pred             cHHHHHHHHHHcCCCCCCEEEecCCCH---HH-H--------------------------HHhhccccEEEcCCC-----
Q psy15363         24 GEANIQATAQALGLDQHRILFSNVAAK---EE-H--------------------------VRRGQLADVCLDTPL-----   68 (130)
Q Consensus        24 ~~~~l~~~~~~~g~~~~rv~f~g~~~~---~~-~--------------------------~~~~~~~Dv~l~~~~-----   68 (130)
                      -|+.+++-+++.|++   |.|.+++..   .| .                          ..++..|||.+--|.     
T Consensus        10 WRe~I~~ga~~~~L~---v~F~~PvtdH~~SD~~G~~iLG~e~~~fw~D~k~a~iN~iRT~~li~~aDvVVvrFGekYKQ   86 (141)
T PF11071_consen   10 WREEIKEGAKAAGLP---VEFTSPVTDHEASDDCGVDILGEEPNKFWRDHKGAKINAIRTRTLIEKADVVVVRFGEKYKQ   86 (141)
T ss_pred             HHHHHHHHHHHcCCC---eEEecCCCCchhhhhhhHHHhCCCCccccccchhhhhhHHHHHHHHhhCCEEEEEechHHHH
Confidence            477788888887774   778777651   11 1                          235678999986663     


Q ss_pred             CCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCC-CCceecCHHHHHHHHH
Q psy15363         69 CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGC-PELIARTHKEYQDIAI  123 (130)
Q Consensus        69 ~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~-~~~va~~~~~y~~~a~  123 (130)
                      |+..+-.--|.+.|+|.|++..+.+.-     -|+++.. -..+++++++-+++..
T Consensus        87 WNaAfDAg~a~AlgKplI~lh~~~~~H-----pLKEvda~A~a~~et~~Qvv~iL~  137 (141)
T PF11071_consen   87 WNAAFDAGYAAALGKPLITLHPEELHH-----PLKEVDAAALAVAETPEQVVEILR  137 (141)
T ss_pred             HHHHhhHHHHHHcCCCeEEecchhccc-----cHHHHhHhhHhhhCCHHHHHHHHH
Confidence            233333444688999999997654321     1111111 1234567766665543

This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>COG3563 KpsC Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]

Probab=89.64  E-value=0.89  Score=37.93  Aligned_cols=80  Identities=20%  Similarity=0.211  Sum_probs=52.6

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCC-CHHHHHHhhcccc-EEEcCCCCCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVA-AKEEHVRRGQLAD-VCLDTPLCNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~-~~~~~~~~~~~~D-v~l~~~~~~~g~~~lEAl   79 (130)
                      ++.....++|.+-+++.-++......-+..+.++... .||+++..- ..   ..+++..| ||.-|+..     -+||+
T Consensus       171 m~~~ai~enp~a~i~~kthpdvl~gkkqg~lt~~~~~-~r~~ll~edfnp---isll~~~dkvy~~ts~m-----gfeal  241 (671)
T COG3563         171 MFQTAINENPQADIWVKTHPDVLCGKKQGYLTQLSQQ-HRVHLLAEDFNP---ISLLQNVDKVYCVTSQM-----GFEAL  241 (671)
T ss_pred             HHHHHHhcCCcccEEEEeCCchhcCcccchhhhhccC-ceEEEecccCCh---HHHHHhcceeEEeeccc-----cHHHH
Confidence            4566788999999999887532222334456666664 889887642 22   23455555 44555554     37999


Q ss_pred             hcCCcEEecCC
Q psy15363         80 WTGTPVVTLPG   90 (130)
Q Consensus        80 a~G~PvV~~~g   90 (130)
                      .||+|++|..-
T Consensus       242 l~~~~~~~fg~  252 (671)
T COG3563         242 LCGKPLTTFGL  252 (671)
T ss_pred             hcCCceeeecc
Confidence            99999999743

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=89.62  E-value=1.7  Score=34.43  Aligned_cols=61  Identities=23%  Similarity=0.284  Sum_probs=38.0

Q ss_pred             hhccccEEEcCCCCCCchHHHHHHhcCCcEEec-CCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHH
Q psy15363         56 RGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL-PGETLASRVAASQLATLGCPELIARTHKEYQDIAIR  124 (130)
Q Consensus        56 ~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~-~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~  124 (130)
                      ++.-||+++    -+||+.+.||-..|+|+|.. +|....   ....+...|+ -+-..|.++-++...+
T Consensus       245 Ll~~a~l~I----g~ggTMa~EAA~LGtPaIs~~~g~~~~---vd~~L~~~Gl-l~~~~~~~ei~~~v~~  306 (335)
T PF04007_consen  245 LLYYADLVI----GGGGTMAREAALLGTPAISCFPGKLLA---VDKYLIEKGL-LYHSTDPDEIVEYVRK  306 (335)
T ss_pred             HHHhcCEEE----eCCcHHHHHHHHhCCCEEEecCCcchh---HHHHHHHCCC-eEecCCHHHHHHHHHH
Confidence            444556655    56899999999999999985 444211   1223444465 3344677776665543

They are found in archaea and some bacteria and have no known function.

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=89.49  E-value=4  Score=33.95  Aligned_cols=82  Identities=16%  Similarity=0.124  Sum_probs=54.6

Q ss_pred             hHHHHHhhCCC----cEEEEeecCcc-c-------HHHHHHHH----HHcCCC-CCCEEEecC-CCHHHHHHhhccccEE
Q psy15363          2 SDIFVLKAVPN----SILWLLKFPAV-G-------EANIQATA----QALGLD-QHRILFSNV-AAKEEHVRRGQLADVC   63 (130)
Q Consensus         2 ~w~~il~~~P~----a~l~i~g~~~~-~-------~~~l~~~~----~~~g~~-~~rv~f~g~-~~~~~~~~~~~~~Dv~   63 (130)
                      +|.++|..+|+    +.|+-++.+.. .       +..+++.+    .++|-. ..-|+|+-. ++++++.++|+.+|++
T Consensus       303 Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~  382 (486)
T COG0380         303 AFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVM  382 (486)
T ss_pred             HHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhcee
Confidence            68899999984    56666664311 1       11222222    244532 234777655 7899999999999999


Q ss_pred             EcCC-CCCCchHHHHHHhcCC
Q psy15363         64 LDTP-LCNGHTTSMDVLWTGT   83 (130)
Q Consensus        64 l~~~-~~~~g~~~lEAla~G~   83 (130)
                      +.|+ ..+--++..|..+|--
T Consensus       383 lVtplrDGMNLvakEyVa~q~  403 (486)
T COG0380         383 LVTPLRDGMNLVAKEYVAAQR  403 (486)
T ss_pred             eeccccccccHHHHHHHHhhc
Confidence            7765 5666889999988743

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=89.43  E-value=6.6  Score=29.83  Aligned_cols=87  Identities=15%  Similarity=0.059  Sum_probs=55.4

Q ss_pred             HHHHHHHHcCCCCCCEEE-ecCCCHHHHHHhhcc--ccEEEcC-CCCCCch--HHHHHHhcCCcEEecCCCchhhhhHHH
Q psy15363         27 NIQATAQALGLDQHRILF-SNVAAKEEHVRRGQL--ADVCLDT-PLCNGHT--TSMDVLWTGTPVVTLPGETLASRVAAS  100 (130)
Q Consensus        27 ~l~~~~~~~g~~~~rv~f-~g~~~~~~~~~~~~~--~Dv~l~~-~~~~~g~--~~lEAla~G~PvV~~~g~~~~~r~~~~  100 (130)
                      .++ .+.++|+.+++++. .|+.+.+.=.++++.  +|+.+.= +...||.  .+--|+.+|+|||...-...       
T Consensus       163 ~l~-~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-------  234 (256)
T TIGR00715       163 ALA-QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-------  234 (256)
T ss_pred             hhH-HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-------
Confidence            444 57888998788666 588886655566654  7777732 3233333  46778889999998754311       


Q ss_pred             HHHhcCCCCceecCHHHHHHHHHHhc
Q psy15363        101 QLATLGCPELIARTHKEYQDIAIRLG  126 (130)
Q Consensus       101 ~l~~~g~~~~va~~~~~y~~~a~~l~  126 (130)
                           ..+.-+..+.++.++...+++
T Consensus       235 -----~~~~~~~~~~~el~~~l~~~~  255 (256)
T TIGR00715       235 -----IPGVAIFDDISQLNQFVARLL  255 (256)
T ss_pred             -----CCCCccCCCHHHHHHHHHHhc
Confidence                 111234578888887776654

This enzyme was found to be a monomer by gel filtration.

>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1

Probab=89.07  E-value=4.3  Score=28.53  Aligned_cols=66  Identities=24%  Similarity=0.120  Sum_probs=40.1

Q ss_pred             HhhccccEEEcCCCCCCch--HHHHHHhcCCcEEecCCCchh-hhhHHHHHHhcCCC-C--ceecCHHHHHHHH
Q psy15363         55 RRGQLADVCLDTPLCNGHT--TSMDVLWTGTPVVTLPGETLA-SRVAASQLATLGCP-E--LIARTHKEYQDIA  122 (130)
Q Consensus        55 ~~~~~~Dv~l~~~~~~~g~--~~lEAla~G~PvV~~~g~~~~-~r~~~~~l~~~g~~-~--~va~~~~~y~~~a  122 (130)
                      .+...+|.|+- .|-+.|+  .+.||+..++||+.++++.+. .++. .++..-+.. +  .+++|+++-++++
T Consensus        87 ~m~~~sda~Iv-lpGG~GTL~E~~~a~~~~kpv~~l~~~g~~~~~l~-~~~~~~~~~~~~~~~~~~~~e~~~~~  158 (159)
T TIGR00725        87 ILVRSADVVVS-VGGGYGTAIEILGAYALGGPVVVLRGTGGWTDRLS-QVLIEGVYLDERVIVEITPAEAVKLA  158 (159)
T ss_pred             HHHHHCCEEEE-cCCchhHHHHHHHHHHcCCCEEEEECCCcchHHHH-HHHhccccccceeEecCCHHHHHHhh
Confidence            34567898863 2434443  589999999999999876443 3333 222222222 2  3457888877665

This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=88.91  E-value=11  Score=30.43  Aligned_cols=58  Identities=21%  Similarity=0.301  Sum_probs=38.3

Q ss_pred             CCchHHHHHHhcCCcEEecCCCch--hhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhcc
Q psy15363         70 NGHTTSMDVLWTGTPVVTLPGETL--ASRVAASQLATLGCPELIAR---THKEYQDIAIRLGT  127 (130)
Q Consensus        70 ~~g~~~lEAla~G~PvV~~~g~~~--~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~  127 (130)
                      +|=+|++|=+..|+|-+..+-...  ..-+-|.-+..+|+-+.+-.   +.+.+.+..+.+.+
T Consensus       302 ~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~  364 (400)
T COG4671         302 GGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALA  364 (400)
T ss_pred             ccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhccc
Confidence            345899999999999877643221  33456778888999876543   35555555554443

>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.43  E-value=2.7  Score=33.01  Aligned_cols=44  Identities=16%  Similarity=0.189  Sum_probs=36.0

Q ss_pred             CEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         41 RILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      ||.-++++|.+++-.++..||+-+    .-|--+-.-|.++|+|-+=.
T Consensus       239 rvvklPFvpqddyd~LL~lcD~n~----VRGEDSFVRAq~agkPflWH  282 (370)
T COG4394         239 RVVKLPFVPQDDYDELLWLCDFNL----VRGEDSFVRAQLAGKPFLWH  282 (370)
T ss_pred             EEEEecCCcHhHHHHHHHhcccce----eecchHHHHHHHcCCCcEEE
Confidence            677889999999999999999876    33445678899999998743

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=88.29  E-value=4.3  Score=29.25  Aligned_cols=47  Identities=19%  Similarity=0.256  Sum_probs=35.8

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      .........+.+++..+++.+|+++.+--    -..+=|+..|+|+|+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl----H~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  238 NVIIIDYSLSPDELLELISQADLVISMRL----HGAILALSLGVPVIAISY  284 (286)
T ss_pred             ceeEecCCCCHHHHHHHHhcCCEEEecCC----HHHHHHHHcCCCEEEEec
Confidence            34444555678999999999999995433    247779999999998754

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=88.09  E-value=0.75  Score=34.71  Aligned_cols=40  Identities=18%  Similarity=0.123  Sum_probs=33.1

Q ss_pred             HHHHHHhhccccEEEcCCCCC-CchHHHHHHhcC-CcEEecC
Q psy15363         50 KEEHVRRGQLADVCLDTPLCN-GHTTSMDVLWTG-TPVVTLP   89 (130)
Q Consensus        50 ~~~~~~~~~~~Dv~l~~~~~~-~g~~~lEAla~G-~PvV~~~   89 (130)
                      ..++...|+.+..+|-|...+ ...-+.|||.+| +|||..+
T Consensus       227 ~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d  268 (302)
T PF03016_consen  227 PSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISD  268 (302)
T ss_pred             chHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecC
Confidence            456889999999999866654 567899999999 8999854

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=87.97  E-value=4.9  Score=25.88  Aligned_cols=76  Identities=17%  Similarity=0.163  Sum_probs=50.4

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEc-CCCCCCchHHHHHHhcC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD-TPLCNGHTTSMDVLWTG   82 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~-~~~~~~g~~~lEAla~G   82 (130)
                      ..+++..|+..++-+-+  +..++.++..++.|+.    .|   .+.+++...- ..|+.+- +.+......+.+++..|
T Consensus        17 ~~~~~~~~~~~v~~v~d--~~~~~~~~~~~~~~~~----~~---~~~~~ll~~~-~~D~V~I~tp~~~h~~~~~~~l~~g   86 (120)
T PF01408_consen   17 RALLRSSPDFEVVAVCD--PDPERAEAFAEKYGIP----VY---TDLEELLADE-DVDAVIIATPPSSHAEIAKKALEAG   86 (120)
T ss_dssp             HHHHHTTTTEEEEEEEC--SSHHHHHHHHHHTTSE----EE---SSHHHHHHHT-TESEEEEESSGGGHHHHHHHHHHTT
T ss_pred             HHHHhcCCCcEEEEEEe--CCHHHHHHHHHHhccc----ch---hHHHHHHHhh-cCCEEEEecCCcchHHHHHHHHHcC
Confidence            34555668888776664  3456677778888874    22   3345554322 5888854 44455567899999999


Q ss_pred             CcEEecC
Q psy15363         83 TPVVTLP   89 (130)
Q Consensus        83 ~PvV~~~   89 (130)
                      ++|++-+
T Consensus        87 ~~v~~EK   93 (120)
T PF01408_consen   87 KHVLVEK   93 (120)
T ss_dssp             SEEEEES
T ss_pred             CEEEEEc
Confidence            9999864

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins

Probab=87.85  E-value=6.7  Score=28.44  Aligned_cols=87  Identities=13%  Similarity=0.023  Sum_probs=53.1

Q ss_pred             HHHHHhhC--CCcEEEEeecCcc----cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC----CC---
Q psy15363          3 DIFVLKAV--PNSILWLLKFPAV----GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP----LC---   69 (130)
Q Consensus         3 w~~il~~~--P~a~l~i~g~~~~----~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~----~~---   69 (130)
                      +.++++..  ++.+++++.....    .-+..++.++++|+....+......+.++..+.+..+|+..-+-    ..   
T Consensus        18 ~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~   97 (210)
T cd03129          18 LQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSV   97 (210)
T ss_pred             HHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHH
Confidence            34444444  5788888875321    23466778889998633333333334567788899999987332    10   


Q ss_pred             ---C-CchHHHHHHhcCCcEEecC
Q psy15363         70 ---N-GHTTSMDVLWTGTPVVTLP   89 (130)
Q Consensus        70 ---~-~g~~~lEAla~G~PvV~~~   89 (130)
                         + .--.+.+..+-|+|++...
T Consensus        98 l~~t~~~~~i~~~~~~G~v~~G~S  121 (210)
T cd03129          98 LRETPLLDAILKRVARGVVIGGTS  121 (210)
T ss_pred             HHhCChHHHHHHHHHcCCeEEEcC
Confidence               1 1124677777899999764

Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from

>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function

Probab=87.77  E-value=2  Score=28.09  Aligned_cols=38  Identities=18%  Similarity=0.165  Sum_probs=27.2

Q ss_pred             HHHHHhhCCCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCEE
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRIL   43 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv~   43 (130)
                      ..+|++..|+-+++++|++|. +-+.-.+.++++   ++||.
T Consensus        55 i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~---P~~i~   93 (100)
T PF09949_consen   55 IERILRDFPERKFILIGDSGQHDPEIYAEIARRF---PGRIL   93 (100)
T ss_pred             HHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHC---CCCEE
Confidence            467899999999999998654 344555666666   36654

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=87.32  E-value=1  Score=35.31  Aligned_cols=105  Identities=13%  Similarity=0.128  Sum_probs=54.6

Q ss_pred             hhCCCcEEEEeecCcccHHHHHHHHHH-cCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEE
Q psy15363          8 KAVPNSILWLLKFPAVGEANIQATAQA-LGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVV   86 (130)
Q Consensus         8 ~~~P~a~l~i~g~~~~~~~~l~~~~~~-~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV   86 (130)
                      ...++..|++..++  .   .+..... .... ++|++...-+  ++..++..+|+++.=+    +.+..|++.+++|||
T Consensus       225 ~~~~~~~li~k~Hp--~---~~~~~~~~~~~~-~~i~~~~~~~--~~~~ll~~aDiLITDy----SSi~fD~~~l~KPii  292 (369)
T PF04464_consen  225 LLKNNYVLIIKPHP--N---MKKKFKDFKEDN-SNIIFVSDNE--DIYDLLAAADILITDY----SSIIFDFLLLNKPII  292 (369)
T ss_dssp             HHTTTEEEEE--SH--H---HHTT----TT-T-TTEEE-TT-S---HHHHHHT-SEEEESS-----THHHHHGGGT--EE
T ss_pred             HhCCCcEEEEEeCc--h---hhhchhhhhccC-CcEEECCCCC--CHHHHHHhcCEEEEec----hhHHHHHHHhCCCEE
Confidence            45567887777763  1   2222222 2333 7888876543  6677788999998333    368999999999999


Q ss_pred             ecCCC--chh-hhhHHHHHH-hcCCCCceecCHHHHHHHHHHhc
Q psy15363         87 TLPGE--TLA-SRVAASQLA-TLGCPELIARTHKEYQDIAIRLG  126 (130)
Q Consensus        87 ~~~g~--~~~-~r~~~~~l~-~~g~~~~va~~~~~y~~~a~~l~  126 (130)
                      ...-+  ... .|-.  ... ..-.++-++.+.+++++......
T Consensus       293 fy~~D~~~Y~~~rg~--~~~~~~~~pg~~~~~~~eL~~~i~~~~  334 (369)
T PF04464_consen  293 FYQPDLEEYEKERGF--YFDYEEDLPGPIVYNFEELIEAIENII  334 (369)
T ss_dssp             EE-TTTTTTTTTSSB--SS-TTTSSSS-EESSHHHHHHHHTTHH
T ss_pred             EEeccHHHHhhccCC--CCchHhhCCCceeCCHHHHHHHHHhhh
Confidence            66332  121 1110  001 11345567888888887665543

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>COG0062 Uncharacterized conserved protein [Function unknown]

Probab=86.80  E-value=11  Score=27.88  Aligned_cols=87  Identities=20%  Similarity=0.246  Sum_probs=52.5

Q ss_pred             hHHHHHhhCCCc----EEEEeecCccc-HH-HHHHHHHHcCCCCCCEEEecCCC---HHHHHHh----------------
Q psy15363          2 SDIFVLKAVPNS----ILWLLKFPAVG-EA-NIQATAQALGLDQHRILFSNVAA---KEEHVRR----------------   56 (130)
Q Consensus         2 ~w~~il~~~P~a----~l~i~g~~~~~-~~-~l~~~~~~~g~~~~rv~f~g~~~---~~~~~~~----------------   56 (130)
                      +|..|++++|+.    .+++.|+++-. .. ...+.+...|.+ =.|.+++.-.   .+...+.                
T Consensus        36 Va~~i~~~~~~~~~~~v~vlcG~GnNGGDG~VaAR~L~~~G~~-V~v~~~~~~~~~~~~~a~~~~~~l~~~~~v~~~~~~  114 (203)
T COG0062          36 VARAILREYPLGRARRVLVLCGPGNNGGDGLVAARHLKAAGYA-VTVLLLGDPKKLKTEAARANLKSLGIGGVVKIKELE  114 (203)
T ss_pred             HHHHHHHHcCcccCCEEEEEECCCCccHHHHHHHHHHHhCCCc-eEEEEeCCCCCccHHHHHHHHHhhcCCcceeecccc
Confidence            577889999974    55666643222 22 233456777854 5677766443   3444333                


Q ss_pred             --hccccEEEcCC-CCC--Cc-----hHHHHHHh-cCCcEEecC
Q psy15363         57 --GQLADVCLDTP-LCN--GH-----TTSMDVLW-TGTPVVTLP   89 (130)
Q Consensus        57 --~~~~Dv~l~~~-~~~--~g-----~~~lEAla-~G~PvV~~~   89 (130)
                        ...+|+.+|.. -.+  +.     -+++|++- .|+|||+.+
T Consensus       115 ~~~~~~dvIVDalfG~G~~g~lrep~a~~Ie~iN~~~~pivAVD  158 (203)
T COG0062         115 DEPESADVIVDALFGTGLSGPLREPFASLIEAINASGKPIVAVD  158 (203)
T ss_pred             cccccCCEEEEeceecCCCCCCccHHHHHHHHHHhcCCceEEEe
Confidence              33578998874 222  11     35677766 999999874

>cd05564 PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)

Probab=86.53  E-value=5.8  Score=25.36  Aligned_cols=66  Identities=20%  Similarity=0.115  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHH--HHhcCCcEEecCCCchh
Q psy15363         25 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMD--VLWTGTPVVTLPGETLA   94 (130)
Q Consensus        25 ~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lE--Ala~G~PvV~~~g~~~~   94 (130)
                      -+.+++.++++|++ -.|...+.   .++.......|++|-+.....-..-++  +.-.++||...+...+.
T Consensus        16 ~~ki~~~~~~~~~~-~~v~~~~~---~~~~~~~~~~Diil~~Pqv~~~~~~i~~~~~~~~~pv~~I~~~~Y~   83 (96)
T cd05564          16 VKKMKKAAEKRGID-AEIEAVPE---SELEEYIDDADVVLLGPQVRYMLDEVKKKAAEYGIPVAVIDMMDYG   83 (96)
T ss_pred             HHHHHHHHHHCCCc-eEEEEecH---HHHHHhcCCCCEEEEChhHHHHHHHHHHHhccCCCcEEEcChHhcc
Confidence            45788899999986 34444433   344445678999986655444444455  34578999998866443

In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB d

>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family

Probab=86.18  E-value=4.4  Score=32.57  Aligned_cols=81  Identities=15%  Similarity=0.136  Sum_probs=52.5

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHc----C----CCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQAL----G----LDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTT   74 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~----g----~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~   74 (130)
                      |-+.+++.+....+++.. |.....+++++...    |    ...=++.++++++.++|-.++-.||+-+    --|=-+
T Consensus       198 ll~~~~~~~~pv~lLvp~-Gr~~~~v~~~l~~~~~~~g~~~~~g~L~~~~LPf~~Q~~yD~LLW~cD~Nf----VRGEDS  272 (371)
T TIGR03837       198 LLDALAQSGSPVHLLVPE-GRALAAVAAWLGDALLAAGDVHRRGALTVAVLPFVPQDDYDRLLWACDLNF----VRGEDS  272 (371)
T ss_pred             HHHHHHhCCCCeEEEecC-CccHHHHHHHhCccccCCccccccCceEEEEcCCCChhhHHHHHHhChhcE----eechhH
Confidence            334444444444455553 45555666655211    1    1112688899999999999999999865    223356


Q ss_pred             HHHHHhcCCcEEec
Q psy15363         75 SMDVLWTGTPVVTL   88 (130)
Q Consensus        75 ~lEAla~G~PvV~~   88 (130)
                      .+-|.++|+|-|=.
T Consensus       273 FVRAqWAgkPfvWh  286 (371)
T TIGR03837       273 FVRAQWAGKPFVWH  286 (371)
T ss_pred             HHHHHHcCCCceee
Confidence            88999999999944

This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.

>KOG0832|consensus

Probab=85.93  E-value=5.7  Score=30.00  Aligned_cols=28  Identities=11%  Similarity=0.217  Sum_probs=21.4

Q ss_pred             cEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         61 DVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        61 Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      |+++---+....++++||.-+++|+|..
T Consensus       175 D~vvvln~~e~~sAilEA~K~~IPTIgI  202 (251)
T KOG0832|consen  175 DLVVVLNPEENHSAILEAAKMAIPTIGI  202 (251)
T ss_pred             ceeEecCcccccHHHHHHHHhCCCeEEE
Confidence            4443334556779999999999999987

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=85.90  E-value=7.7  Score=30.72  Aligned_cols=56  Identities=23%  Similarity=0.281  Sum_probs=36.5

Q ss_pred             CCchHHHHHHhcCCcEEec-CCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         70 NGHTTSMDVLWTGTPVVTL-PGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        70 ~~g~~~lEAla~G~PvV~~-~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      +||+..-||...|+|.|.. +|...   .....+-..|+ -+-..|+.+-+++|++++.++
T Consensus       259 ~ggTMarEaAlLGtpaIs~~pGkll---~vdk~lie~G~-~~~s~~~~~~~~~a~~~l~~~  315 (346)
T COG1817         259 AGGTMAREAALLGTPAISCYPGKLL---AVDKYLIEKGL-LYHSTDEIAIVEYAVRNLKYR  315 (346)
T ss_pred             CCchHHHHHHHhCCceEEecCCccc---cccHHHHhcCc-eeecCCHHHHHHHHHHHhhch
Confidence            4788999999999999976 55311   01122222222 122367789999999988765

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=85.68  E-value=4  Score=32.29  Aligned_cols=81  Identities=14%  Similarity=0.021  Sum_probs=51.9

Q ss_pred             HHHHhhCCCc-EEEEeecCcccHHHHHHHHHHcCCCCCCEEEe--cCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          4 IFVLKAVPNS-ILWLLKFPAVGEANIQATAQALGLDQHRILFS--NVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         4 ~~il~~~P~a-~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~--g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      .+.|.+.++. ++++.+.+   .+++++.+++..  ..++.+.  ...+.+++.++++.+|++++..+ +.+...+--|+
T Consensus        14 ~~~L~~~~~~~~v~va~r~---~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~~~v~~~~i   88 (386)
T PF03435_consen   14 ARLLARRGPFEEVTVADRN---PEKAERLAEKLL--GDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFGEPVARACI   88 (386)
T ss_dssp             HHHHHCTTCE-EEEEEESS---HHHHHHHHT--T--TTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGHHHHHHHHH
T ss_pred             HHHHhcCCCCCcEEEEECC---HHHHHHHHhhcc--ccceeEEEEecCCHHHHHHHHhcCCEEEECCccchhHHHHHHHH
Confidence            4566677766 77777753   456666666532  2455554  33456778899999999999874 53445667789


Q ss_pred             hcCCcEEecC
Q psy15363         80 WTGTPVVTLP   89 (130)
Q Consensus        80 a~G~PvV~~~   89 (130)
                      ..|++.|-..
T Consensus        89 ~~g~~yvD~~   98 (386)
T PF03435_consen   89 EAGVHYVDTS   98 (386)
T ss_dssp             HHT-EEEESS
T ss_pred             HhCCCeeccc
Confidence            9999999843

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=84.82  E-value=3.5  Score=31.32  Aligned_cols=55  Identities=18%  Similarity=0.031  Sum_probs=33.9

Q ss_pred             ccccEEEcCC-CCCCchHHHHHHhcCCcEEec-CCCchhhhhHHHH---HHhcCCCCceecC
Q psy15363         58 QLADVCLDTP-LCNGHTTSMDVLWTGTPVVTL-PGETLASRVAASQ---LATLGCPELIART  114 (130)
Q Consensus        58 ~~~Dv~l~~~-~~~~g~~~lEAla~G~PvV~~-~g~~~~~r~~~~~---l~~~g~~~~va~~  114 (130)
                      ..+|+.+|.+ |...--.+..|+..|+|||+. +|-..  .....+   .+..|.+-+++.+
T Consensus        67 ~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigttg~~~--e~~~~l~~aA~~~g~~v~~a~N  126 (266)
T TIGR00036        67 TDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTTGFSE--EDKQELADLAEKAGIAAVIAPN  126 (266)
T ss_pred             CCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCCCCH--HHHHHHHHHHhcCCccEEEECc
Confidence            4589998855 444556789999999999974 34221  122222   2334555566555

>TIGR03646 YtoQ_fam YtoQ family protein

Probab=84.38  E-value=3.6  Score=28.41  Aligned_cols=67  Identities=22%  Similarity=0.192  Sum_probs=45.1

Q ss_pred             cHHHHHHHHHHcCCCCCCEEEecCCCH----HHH--------------------------HHhhccccEEEcCCC-----
Q psy15363         24 GEANIQATAQALGLDQHRILFSNVAAK----EEH--------------------------VRRGQLADVCLDTPL-----   68 (130)
Q Consensus        24 ~~~~l~~~~~~~g~~~~rv~f~g~~~~----~~~--------------------------~~~~~~~Dv~l~~~~-----   68 (130)
                      -|+++++-+++.|++   |.|.+++..    ++.                          ..++..|||.+--|.     
T Consensus        13 WRe~I~~ga~~~~L~---v~F~~pvtdH~aSD~~G~~iLG~e~~~fw~D~k~a~iNaiRT~~li~~aDvvVvrFGekYKQ   89 (144)
T TIGR03646        13 WREEIKEGAKSKNLP---IVFSGPVTDHEASDNIGEDILGKQPSNFWRDDAAASINNIRTRKLIEKADVVIALFGEKYKQ   89 (144)
T ss_pred             HHHHHHHHHHHcCCC---eEEecCCCCCcchhhhhHHHhCCCCccccccccccchhhHHHHHHHhhCCEEEEEechHHHH
Confidence            478888888888875   788877641    111                          245677999986663     


Q ss_pred             CCCchHHHHHHhcCCcEEecCCCch
Q psy15363         69 CNGHTTSMDVLWTGTPVVTLPGETL   93 (130)
Q Consensus        69 ~~~g~~~lEAla~G~PvV~~~g~~~   93 (130)
                      |+...-.--|.+.|+|.|++..+.+
T Consensus        90 WNaAfDAg~aaAlgKplI~lh~~~~  114 (144)
T TIGR03646        90 WNAAFDAGYAAALGKPLIILRPEEL  114 (144)
T ss_pred             HHHHhhHHHHHHcCCCeEEecchhc
Confidence            2333334446889999999976543

Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>COG1152 CdhA CO dehydrogenase/acetyl-CoA synthase alpha subunit [Energy production and conversion]

Probab=84.19  E-value=5.6  Score=34.05  Aligned_cols=97  Identities=18%  Similarity=0.222  Sum_probs=56.4

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEec-------------------CCCHHHHHHhhccccEEEcCCCCCCchH
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSN-------------------VAAKEEHVRRGQLADVCLDTPLCNGHTT   74 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g-------------------~~~~~~~~~~~~~~Dv~l~~~~~~~g~~   74 (130)
                      .++++|++...-..+.+++.+.|+. +.|.+.|                   +++++-..-.-..+||.+.-=..-.+-.
T Consensus       238 ~il~iGHnv~~~~~i~dyleE~~l~-d~vE~~GlccTA~D~tRy~~~aKvvGpls~ql~~IrsG~aDViVvDEqCir~Di  316 (772)
T COG1152         238 TILVIGHNVAPGTYIMDYLEENGLE-DEVELAGLCCTAIDMTRYDEAAKVVGPLSKQLKVIRSGKADVIVVDEQCIREDI  316 (772)
T ss_pred             eEEEeccccccchHHHHHHHhccch-hhhheeeeeeeccccchhhhhhhhhchhhhhhhhhhcCCceEEEecccccchhH
Confidence            4556776533345667777777775 6655544                   3332211112234788763223334567


Q ss_pred             HHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHH
Q psy15363         75 SMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIA  122 (130)
Q Consensus        75 ~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a  122 (130)
                      +-||+-.|.|||++....           .+|+++....++++.++..
T Consensus       317 leea~k~g~~vIat~~k~-----------~~gLpD~Td~~~d~iV~~L  353 (772)
T COG1152         317 LEEASKLGIPVIATNEKG-----------MLGLPDVTDEDVDEIVESL  353 (772)
T ss_pred             HHHHhccCCceEechhHH-----------hcCCCccccCCHHHHHHHH
Confidence            889999999999876431           2377766666666555543

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=84.17  E-value=9.2  Score=30.95  Aligned_cols=86  Identities=15%  Similarity=0.174  Sum_probs=51.2

Q ss_pred             HHHhhCCC-cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCH------------------HHHHHhhc--cccEE
Q psy15363          5 FVLKAVPN-SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAK------------------EEHVRRGQ--LADVC   63 (130)
Q Consensus         5 ~il~~~P~-a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~------------------~~~~~~~~--~~Dv~   63 (130)
                      .++++.|+ .+++-+.. +...+.+.+++++++-  +.|.....-..                  +.+..+..  .+|++
T Consensus        19 ~vi~~~p~~f~VvaLaa-~~n~~~l~~q~~~f~p--~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~~~~~l~~~~~vD~V   95 (385)
T PRK05447         19 DVIRRNPDRFRVVALSA-GKNVELLAEQAREFRP--KYVVVADEEAAKELKEALAAAGIEVLAGEEGLCELAALPEADVV   95 (385)
T ss_pred             HHHHhCccccEEEEEEc-CCCHHHHHHHHHHhCC--CEEEEcCHHHHHHHHHhhccCCceEEEChhHHHHHhcCCCCCEE
Confidence            35666774 45444442 3456677777777763  44443332111                  22222332  47999


Q ss_pred             EcCCC-CCCchHHHHHHhcCCcEEecCCCch
Q psy15363         64 LDTPL-CNGHTTSMDVLWTGTPVVTLPGETL   93 (130)
Q Consensus        64 l~~~~-~~~g~~~lEAla~G~PvV~~~g~~~   93 (130)
                      +...+ ..+-..+++|+.+|++|.+-..+..
T Consensus        96 v~Ai~G~aGl~ptl~Ai~aGK~VaLANKEsl  126 (385)
T PRK05447         96 VAAIVGAAGLLPTLAAIRAGKRIALANKESL  126 (385)
T ss_pred             EEeCcCcccHHHHHHHHHCCCcEEEeCHHHH
Confidence            87765 4455679999999999998655544

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=84.11  E-value=11  Score=33.16  Aligned_cols=85  Identities=15%  Similarity=0.093  Sum_probs=56.9

Q ss_pred             hhCCCcEEEEeecCccc----HHHHH---HHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC--C-CCCchHHHH
Q psy15363          8 KAVPNSILWLLKFPAVG----EANIQ---ATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP--L-CNGHTTSMD   77 (130)
Q Consensus         8 ~~~P~a~l~i~g~~~~~----~~~l~---~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~--~-~~~g~~~lE   77 (130)
                      ...|-..+++.|.-.|.    ++.++   ..++.-+.- .+|+|++.-+-.--..++..+||-+.++  + +.+||+-+=
T Consensus       519 d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~-lkVvFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK  597 (750)
T COG0058         519 DWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNK-LKVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMK  597 (750)
T ss_pred             CCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhccc-ceEEEeCCCChhHHHhhcccccccccCCCCCccccCcCcch
Confidence            34566777777753332    33333   223332332 6899999877544455789999998765  3 568999999


Q ss_pred             HHhcCCcEEec-CCCch
Q psy15363         78 VLWTGTPVVTL-PGETL   93 (130)
Q Consensus        78 Ala~G~PvV~~-~g~~~   93 (130)
                      ++--|.|.+.+ +|.+.
T Consensus       598 ~alNGaltigtlDGanv  614 (750)
T COG0058         598 AALNGALTLGTLDGANV  614 (750)
T ss_pred             HHhcCCceeeccccHHH
Confidence            99999999966 66543

>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome

Probab=83.98  E-value=8.5  Score=27.84  Aligned_cols=79  Identities=10%  Similarity=0.035  Sum_probs=48.6

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe-cCCCHH-HHH----------------------HhhccccEEEcCC
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFS-NVAAKE-EHV----------------------RRGQLADVCLDTP   67 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~-g~~~~~-~~~----------------------~~~~~~Dv~l~~~   67 (130)
                      +-+++++|........+++.+++.|...-.=.++ |..+.. ...                      .....-|+.+-.-
T Consensus        56 ~g~iLfV~t~~~~~~~v~~~a~~~~~~~i~~rw~~G~LTN~~~~~~~~~~~~~~~~~~~~k~~~g~~~~~~~Pdlviv~~  135 (193)
T cd01425          56 GGKILFVGTKPQAQRAVKKFAERTGSFYVNGRWLGGTLTNWKTIRKSIKRLKKLEKEKLEKNLGGIKDMFRLPDLVIVLD  135 (193)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHcCCeeecCeecCCcCCCHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCEEEEeC
Confidence            4677888875344556666676655321112344 444532 221                      1345677775455


Q ss_pred             CCCCchHHHHHHhcCCcEEecCC
Q psy15363         68 LCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        68 ~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      |..-...+.||..+|+|+|+.-.
T Consensus       136 ~~~~~~ai~Ea~~l~IP~I~i~D  158 (193)
T cd01425         136 PRKEHQAIREASKLGIPVIAIVD  158 (193)
T ss_pred             CccchHHHHHHHHcCCCEEEEec
Confidence            55557889999999999998843

It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an

>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]

Probab=83.03  E-value=20  Score=28.51  Aligned_cols=119  Identities=13%  Similarity=0.157  Sum_probs=79.7

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCC-CCCEEEec----CCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcE
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLD-QHRILFSN----VAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPV   85 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~-~~rv~f~g----~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~Pv   85 (130)
                      ++-.+=++|.+|.++..|-+.++.+.-+ ..+|..-|    ..+..++.+.=+..-...--|..-+..|+.|..|+-+-+
T Consensus        31 ~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLei  110 (339)
T COG1135          31 KGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLEL  110 (339)
T ss_pred             CCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhh
Confidence            3456778887788899999999876543 24777777    344555555444444444344444567888888876555


Q ss_pred             EecCCCchhhhhHHHHHHhcCCCCceec-------CHHHHHHHHHHhccCCC
Q psy15363         86 VTLPGETLASRVAASQLATLGCPELIAR-------THKEYQDIAIRLGTDRD  130 (130)
Q Consensus        86 V~~~g~~~~~r~~~~~l~~~g~~~~va~-------~~~~y~~~a~~l~~d~e  130 (130)
                      -..+......| .+.++.-.|++++...       ....-|.+|-+|+++|+
T Consensus       111 ag~~k~ei~~R-V~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P~  161 (339)
T COG1135         111 AGVPKAEIKQR-VAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNPK  161 (339)
T ss_pred             cCCCHHHHHHH-HHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCCC
Confidence            54433333444 4678888999987653       45788999999999985

>KOG1387|consensus

Probab=82.93  E-value=7.5  Score=31.44  Aligned_cols=87  Identities=16%  Similarity=0.125  Sum_probs=51.7

Q ss_pred             hHHHH---HhhCCCcEEEEeecC-cc-cHHHHHHHHHHcCC--CCCCEEEecC-----CC--HH---------------H
Q psy15363          2 SDIFV---LKAVPNSILWLLKFP-AV-GEANIQATAQALGL--DQHRILFSNV-----AA--KE---------------E   52 (130)
Q Consensus         2 ~w~~i---l~~~P~a~l~i~g~~-~~-~~~~l~~~~~~~g~--~~~rv~f~g~-----~~--~~---------------~   52 (130)
                      +|..+   .++.||.+.++..+. .. ..+.|++.-+..++  ++++|.|.--     ++  ..               .
T Consensus        63 LW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lVea~~~~hfTllgQaigsmIl~  142 (465)
T KOG1387|consen   63 LWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRYLVEASTWKHFTLLGQAIGSMILA  142 (465)
T ss_pred             hhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeeeeeecccccceehHHHHHHHHHHH
Confidence            35544   578999999988742 11 23455555556664  4578877521     11  01               1


Q ss_pred             HHHhhcc-ccEEEcCCCCCCchHHHHHHhcCCcEEecC
Q psy15363         53 HVRRGQL-ADVCLDTPLCNGHTTSMDVLWTGTPVVTLP   89 (130)
Q Consensus        53 ~~~~~~~-~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~   89 (130)
                      +-++++. -|||+||..+.+.-.++-. -.+.||++.-
T Consensus       143 ~Eai~r~~Pdi~IDtMGY~fs~p~~r~-l~~~~V~aYv  179 (465)
T KOG1387|consen  143 FEAIIRFPPDIFIDTMGYPFSYPIFRR-LRRIPVVAYV  179 (465)
T ss_pred             HHHHHhCCchheEecCCCcchhHHHHH-HccCceEEEE
Confidence            1233333 5999999766555555544 6799999873

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=82.75  E-value=25  Score=28.78  Aligned_cols=111  Identities=12%  Similarity=0.062  Sum_probs=63.6

Q ss_pred             EEEeecCcccHHHHHHHHHHcCCCCCCEEEecCC---CHHHHHHhhcc---cc---EEEcCCCCCCc-hHHHHHHhcCCc
Q psy15363         15 LWLLKFPAVGEANIQATAQALGLDQHRILFSNVA---AKEEHVRRGQL---AD---VCLDTPLCNGH-TTSMDVLWTGTP   84 (130)
Q Consensus        15 l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~---~~~~~~~~~~~---~D---v~l~~~~~~~g-~~~lEAla~G~P   84 (130)
                      +-+++.+|..-..+-.++.+.|+....++=+|.-   +..|++.++..   ..   +|+.+...+.. ...+...+.++|
T Consensus       153 valvsqSG~~~~~~~~~~~~~g~g~s~~vs~Gn~~d~~~~d~l~~l~~D~~t~~I~ly~E~~~~~~~f~~aa~~a~~~KP  232 (447)
T TIGR02717       153 IAFISQSGALLTALLDWAEKNGVGFSYFVSLGNKADIDESDLLEYLADDPDTKVILLYLEGIKDGRKFLKTAREISKKKP  232 (447)
T ss_pred             EEEEechHHHHHHHHHHHHhcCCCcceEEECCchhhCCHHHHHHHHhhCCCCCEEEEEecCCCCHHHHHHHHHHHcCCCC
Confidence            3444433333345667778878776778878753   46778777754   33   33444332211 234444455999


Q ss_pred             EEecCC-Cchhhhh---------------HHHHHHhcCCCCceecCHHHHHHHHHHhcc
Q psy15363         85 VVTLPG-ETLASRV---------------AASQLATLGCPELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        85 vV~~~g-~~~~~r~---------------~~~~l~~~g~~~~va~~~~~y~~~a~~l~~  127 (130)
                      ||.++. ++-.++-               -.++++..|+  ...+|.+|+.+.+.-|..
T Consensus       233 Vv~~k~Grs~~g~~aa~sHtgalag~~~~~~a~~~~~Gv--~~~~~~~el~~~~~~l~~  289 (447)
T TIGR02717       233 IVVLKSGTSEAGAKAASSHTGALAGSDEAYDAAFKQAGV--IRADSIEELFDLARLLSN  289 (447)
T ss_pred             EEEEecCCChhhhhhhhhccccccChHHHHHHHHHHCCe--EEeCCHHHHHHHHHHHhc
Confidence            999854 4322221               1123333332  556899999999887764

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PRK06270 homoserine dehydrogenase; Provisional

Probab=82.24  E-value=19  Score=28.38  Aligned_cols=65  Identities=18%  Similarity=0.017  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCC--C----chHHHHHHhcCCcEEecCC
Q psy15363         25 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCN--G----HTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        25 ~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~--~----g~~~lEAla~G~PvV~~~g   90 (130)
                      .+.+.++.++.|.....-......+.+++..- ..+|++++..|..  +    -..+.+|+..|++|||...
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~d~~ell~~-~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK  126 (341)
T PRK06270         56 LELALKVKEETGKLADYPEGGGEISGLEVIRS-VDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNK  126 (341)
T ss_pred             HHHHHHHHhccCCcccCccccccCCHHHHhhc-cCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCc
Confidence            44556665655531010000012244554321 3589999865432  1    2346899999999999643

>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component

Probab=82.17  E-value=5.7  Score=25.45  Aligned_cols=74  Identities=19%  Similarity=0.182  Sum_probs=46.0

Q ss_pred             EEEEeecCccc----HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh--cCCcEEe
Q psy15363         14 ILWLLKFPAVG----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW--TGTPVVT   87 (130)
Q Consensus        14 ~l~i~g~~~~~----~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla--~G~PvV~   87 (130)
                      +++++++.|-.    -..+++.++++|++ -.|.-.   +..++.......|++|-+.....-..-++..+  .|+||++
T Consensus         5 ~ILl~C~~G~sSS~l~~k~~~~~~~~gi~-~~v~a~---~~~~~~~~~~~~Dvill~pqi~~~~~~i~~~~~~~~ipv~~   80 (95)
T TIGR00853         5 NILLLCAAGMSTSLLVNKMNKAAEEYGVP-VKIAAG---SYGAAGEKLDDADVVLLAPQVAYMLPDLKKETDKKGIPVEV   80 (95)
T ss_pred             EEEEECCCchhHHHHHHHHHHHHHHCCCc-EEEEEe---cHHHHHhhcCCCCEEEECchHHHHHHHHHHHhhhcCCCEEE
Confidence            45555544432    35788889999986 333333   33445555678899986665444444555554  4679999


Q ss_pred             cCCC
Q psy15363         88 LPGE   91 (130)
Q Consensus        88 ~~g~   91 (130)
                      .+..
T Consensus        81 I~~~   84 (95)
T TIGR00853        81 INGA   84 (95)
T ss_pred             eChh
Confidence            8764

Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=82.10  E-value=6.6  Score=34.64  Aligned_cols=53  Identities=13%  Similarity=0.080  Sum_probs=42.4

Q ss_pred             CEEEecCCCHHHHHHhhccccEEEcCC--C-CCCchHHHHHHhcCCcEEec-CCCch
Q psy15363         41 RILFSNVAAKEEHVRRGQLADVCLDTP--L-CNGHTTSMDVLWTGTPVVTL-PGETL   93 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv~l~~~--~-~~~g~~~lEAla~G~PvV~~-~g~~~   93 (130)
                      +|+|+..-.-.--..++..|||.+..+  + +.+||+-+=+|.-|.+.+++ +|.+.
T Consensus       607 kVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanv  663 (794)
T TIGR02093       607 KVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV  663 (794)
T ss_pred             eEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhH
Confidence            899999877555556789999998765  3 56899999999999999966 66544

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>KOG3349|consensus

Probab=81.95  E-value=6.2  Score=28.04  Aligned_cols=48  Identities=17%  Similarity=0.289  Sum_probs=34.4

Q ss_pred             HhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhc
Q psy15363         55 RRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATL  105 (130)
Q Consensus        55 ~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~  105 (130)
                      ..++.||+.+   ...|.-+.+|.+..|+|.|+...+..-..+...+...+
T Consensus        76 e~I~~AdlVI---sHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL  123 (170)
T KOG3349|consen   76 EDIRSADLVI---SHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQL  123 (170)
T ss_pred             HHHhhccEEE---ecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHH
Confidence            3456799987   23455679999999999988877766666665554443

>PRK14046 malate--CoA ligase subunit beta; Provisional

Probab=81.90  E-value=25  Score=28.32  Aligned_cols=97  Identities=16%  Similarity=0.075  Sum_probs=60.6

Q ss_pred             HHHHHcCCCC-CCEEEecCCCHHHHHHhhcc------ccEEEcCCC--CCCchHHHHHHh-------cCCcEEecCCCch
Q psy15363         30 ATAQALGLDQ-HRILFSNVAAKEEHVRRGQL------ADVCLDTPL--CNGHTTSMDVLW-------TGTPVVTLPGETL   93 (130)
Q Consensus        30 ~~~~~~g~~~-~rv~f~g~~~~~~~~~~~~~------~Dv~l~~~~--~~~g~~~lEAla-------~G~PvV~~~g~~~   93 (130)
                      ..+..+|..+ +-+.+.|..+.+.+...++.      +|..+-...  ......+.+++.       .++|+|+.-.. .
T Consensus       274 D~i~~~gg~paNPlDlgg~a~~e~~~~aL~~ll~Dp~VdaVlv~i~ggi~~~~~vA~~Ii~a~~~~~~~kPvvv~l~G-~  352 (392)
T PRK14046        274 DMIKLAGGEPANFLDVGGGASPERVAKAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVQAAREVGIDVPLVVRLAG-T  352 (392)
T ss_pred             HHHHhcCCCCcCCEEecCCCCHHHHHHHHHHHHcCCCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEcCC-C
Confidence            5567777665 45777555555555444432      456642222  122233555544       57899876433 2


Q ss_pred             hhhhHHHHHHhcCCCCceecCHHHHHHHHHHhcc
Q psy15363         94 ASRVAASQLATLGCPELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        94 ~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~  127 (130)
                      ....+..+++..|++-+..+|.++=+++|+++++
T Consensus       353 ~~e~~~~iL~~~Gipvf~~~~~~~a~~~~v~~~~  386 (392)
T PRK14046        353 NVEEGRKILAESGLPIITADTLAEAAEKAVEAWK  386 (392)
T ss_pred             CHHHHHHHHHHcCCCeeecCCHHHHHHHHHHHHh
Confidence            2334566788889999999999999999999875

>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase

Probab=81.82  E-value=17  Score=27.60  Aligned_cols=80  Identities=16%  Similarity=0.129  Sum_probs=44.8

Q ss_pred             HHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH-hcCCcEEecCCCc--hh-hhhHHHH
Q psy15363         26 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL-WTGTPVVTLPGET--LA-SRVAASQ  101 (130)
Q Consensus        26 ~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl-a~G~PvV~~~g~~--~~-~r~~~~~  101 (130)
                      ..|++.++++|+.    ++.-..+.++...+...+|++-=++....-..+++++ ..|+||+...|-.  +. -......
T Consensus        79 ~~l~~~~~~~Gl~----~~t~~~d~~~~~~l~~~~d~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~  154 (260)
T TIGR01361        79 KLLRRAADEHGLP----VVTEVMDPRDVEIVAEYADILQIGARNMQNFELLKEVGKQGKPVLLKRGMGNTIEEWLYAAEY  154 (260)
T ss_pred             HHHHHHHHHhCCC----EEEeeCChhhHHHHHhhCCEEEECcccccCHHHHHHHhcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence            4566777788875    3333333333333334588884344333334455555 4699999998854  21 1224455


Q ss_pred             HHhcCCCC
Q psy15363        102 LATLGCPE  109 (130)
Q Consensus       102 l~~~g~~~  109 (130)
                      +...|.++
T Consensus       155 i~~~Gn~~  162 (260)
T TIGR01361       155 ILSSGNGN  162 (260)
T ss_pred             HHHcCCCc
Confidence            66667765

The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=81.20  E-value=20  Score=28.28  Aligned_cols=82  Identities=16%  Similarity=0.003  Sum_probs=49.7

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCC-------------CCEEEecCCCHHHHHHhhccccEEEcCCC-
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQ-------------HRILFSNVAAKEEHVRRGQLADVCLDTPL-   68 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~-------------~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-   68 (130)
                      ..+.+.+.|+..|+-+.+.  ..+....+++++|.+.             ..+.+.+.     ...++..+|+.++..+ 
T Consensus        16 va~al~~~~d~eLvav~d~--~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~-----~~el~~~vDVVIdaT~~   88 (341)
T PRK04207         16 VADAVAAQPDMELVGVAKT--KPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGT-----IEDLLEKADIVVDATPG   88 (341)
T ss_pred             HHHHHhcCCCcEEEEEECC--ChHHHHHHHHhcCCCccccCccccccccCCceEEcCC-----hhHhhccCCEEEECCCc
Confidence            4566677899998877752  2344555566565320             11222222     2233467999998665 


Q ss_pred             CCCchHHHHHHhcCCcEEecCCC
Q psy15363         69 CNGHTTSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        69 ~~~g~~~lEAla~G~PvV~~~g~   91 (130)
                      +...-..-.+..+|+|||...+.
T Consensus        89 ~~~~e~a~~~~~aGk~VI~~~~~  111 (341)
T PRK04207         89 GVGAKNKELYEKAGVKAIFQGGE  111 (341)
T ss_pred             hhhHHHHHHHHHCCCEEEEcCCC
Confidence            44444556678889999988764

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=81.00  E-value=22  Score=31.09  Aligned_cols=51  Identities=18%  Similarity=0.138  Sum_probs=37.5

Q ss_pred             CEEEecCCCHHHHHHhhccccEEEcCC--C-CCCchHHHHHHhcCCcEEec-CCC
Q psy15363         41 RILFSNVAAKEEHVRRGQLADVCLDTP--L-CNGHTTSMDVLWTGTPVVTL-PGE   91 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv~l~~~--~-~~~g~~~lEAla~G~PvV~~-~g~   91 (130)
                      ||+|+..-+-.--..++..+||.+.++  | +.+||+-+=++.-|.+.+++ +|.
T Consensus       524 kVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~  578 (713)
T PF00343_consen  524 KVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGW  578 (713)
T ss_dssp             EEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTC
T ss_pred             eEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccch
Confidence            799999887665566789999999866  4 46899999999999999977 554

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional

Probab=80.93  E-value=19  Score=27.40  Aligned_cols=81  Identities=16%  Similarity=0.079  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH-hcCCcEEecCCCch--h-hhhHHH
Q psy15363         25 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL-WTGTPVVTLPGETL--A-SRVAAS  100 (130)
Q Consensus        25 ~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl-a~G~PvV~~~g~~~--~-~r~~~~  100 (130)
                      .+.|++..+++|+.    +++-..+.++...+...+|++==++....-..+++++ ..|+||+..+|-..  . -...+.
T Consensus        68 l~~L~~~~~~~Gl~----~~Tev~d~~~v~~~~e~vdilqIgs~~~~n~~LL~~va~tgkPVilk~G~~~t~~e~~~A~e  143 (250)
T PRK13397         68 IRYLHEVCQEFGLL----SVSEIMSERQLEEAYDYLDVIQVGARNMQNFEFLKTLSHIDKPILFKRGLMATIEEYLGALS  143 (250)
T ss_pred             HHHHHHHHHHcCCC----EEEeeCCHHHHHHHHhcCCEEEECcccccCHHHHHHHHccCCeEEEeCCCCCCHHHHHHHHH
Confidence            35677788898986    4444445444444445699983343333336677776 56999999988322  1 122455


Q ss_pred             HHHhcCCCC
Q psy15363        101 QLATLGCPE  109 (130)
Q Consensus       101 ~l~~~g~~~  109 (130)
                      .+...|.++
T Consensus       144 ~i~~~Gn~~  152 (250)
T PRK13397        144 YLQDTGKSN  152 (250)
T ss_pred             HHHHcCCCe
Confidence            566667765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	130
3pe3_A	723	Structure Of Human O-Glcnac Transferase And Its Com		3e-54
2vsn_A	568	Structure And Topological Arrangement Of An O-Glcna		2e-20
2vsy_A	568	Xanthomonas Campestris Putative Ogt (Xcc0866), Apos		2e-20

>pdb|3PE3|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex With A Peptide Substrate Length = 723

Iteration: 1
 Score =  206 bits (524), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 108/123 (87%)
Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct: 546 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 605
Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +EY+DIA++L
Sbjct: 606 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKL 665
Query: 126 GTD 128
           GTD
Sbjct: 666 GTD 668

>pdb|2VSN|A Chain A, Structure And Topological Arrangement Of An O-Glcnac Transferase Homolog: Insight Into Molecular Control Of Intracellular Glycosylation Length = 568

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 72/123 (58%)
Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           VL+ VP+S+LWLL  P   +A ++A A A G+D  R++F       +++ R + AD+ LD
Sbjct: 400 VLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLD 459
Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           T   N HTT+ D LWTG PV+T PGET A+RVA S    LG  E+       +   A+ L
Sbjct: 460 THPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVAL 519
Query: 126 GTD 128
            +D
Sbjct: 520 ASD 522

>pdb|2VSY|A Chain A, Xanthomonas Campestris Putative Ogt (Xcc0866), Apostructure Length = 568

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 72/123 (58%)
Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           VL+ VP+S+LWLL  P   +A ++A A A G+D  R++F       +++ R + AD+ LD
Sbjct: 400 VLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLD 459
Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           T   N HTT+ D LWTG PV+T PGET A+RVA S    LG  E+       +   A+ L
Sbjct: 460 THPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVAL 519
Query: 126 GTD 128
            +D
Sbjct: 520 ASD 522

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	130
3tax_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	3e-53
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	1e-51
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	8e-39

>3tax_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; thiocarbamate crosslink, covalent inhibitor, gylcosyltransfe inhibitor, O-GLCNAC transferase; HET: UDP; 1.88A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* Length = 723

 Score =  177 bits (449), Expect = 3e-53
 Identities = 95/125 (76%), Positives = 109/125 (87%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           +LK VPNS+LWLL+FPAVGE NIQ  AQ +GL Q+RI+FS VA KEEHVRRGQLADVCLD
Sbjct: 546 ILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLD 605

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           TPLCNGHTT MDVLW GTP+VT+PGETLASRVAASQL  LGC ELIA+  +EY+DIA++L
Sbjct: 606 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKL 665

Query: 126 GTDRD 130
           GTD +
Sbjct: 666 GTDLE 670

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Length = 568

 Score =  170 bits (432), Expect = 1e-51
 Identities = 51/125 (40%), Positives = 72/125 (57%)

Query: 6   VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 65
           VL+ VP+S+LWLL  P   +A ++A A A G+D  R++F       +++ R + AD+ LD
Sbjct: 400 VLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLD 459

Query: 66  TPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 125
           T   N HTT+ D LWTG PV+T PGET A+RVA S    LG  E+       +   A+ L
Sbjct: 460 THPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVAL 519

Query: 126 GTDRD 130
            +D  
Sbjct: 520 ASDPA 524

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A Length = 631

 Score =  136 bits (344), Expect = 8e-39
 Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 6/129 (4%)

Query: 6   VLKAVPNSILWLLKF---PAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADV 62
           +       + +         +    ++   ++   D         +   +++R     D+
Sbjct: 464 IRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGD--SATAHPHSPYHQYLRILHNCDM 521

Query: 63  CLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPE-LIARTHKEYQDI 121
            ++          +D++  G   V   G  +   +       LG PE LIA T  EY + 
Sbjct: 522 MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIANTVDEYVER 581

Query: 122 AIRLGTDRD 130
           A+RL  +  
Sbjct: 582 AVRLAENHQ 590

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	130
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	100.0
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.97
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	99.93
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.75
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	99.73
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.73
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	99.73
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	99.73
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	99.73
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.7
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	99.68
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	99.68
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	99.67
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	99.66
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	99.65
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	99.63
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	99.63
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	99.61
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	99.58
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.56
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	99.55
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	99.54
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.5
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.49
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.44
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	99.36
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.35
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.34
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.24
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.21
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.2
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.01
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	98.98
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	98.96
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	98.95
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	98.88
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	98.86
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	98.81
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	98.78
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	98.69
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	98.68
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	98.66
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	98.59
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	98.53
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	98.45
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	98.44
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	98.32
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	98.2
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	97.91
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	97.9
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	97.81
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	97.37
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	97.3
3tov_A	349	Glycosyl transferase family 9; structural genomics	97.29
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	97.23
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	97.21
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	97.12
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	96.93
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	96.36
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	96.21
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	94.29
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	94.15
4had_A	350	Probable oxidoreductase protein; structural genomi	93.98
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	93.07
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	92.92
2l2q_A	109	PTS system, cellobiose-specific IIB component (CE;	92.01
3j20_B	202	30S ribosomal protein S2P; archaea, archaeal, KINK	91.59
3to5_A	134	CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, p	89.62
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	89.55
3moi_A	387	Probable dehydrogenase; structural genomics, PSI2,	89.47
2pln_A	137	HP1043, response regulator; signaling protein; 1.8	89.27
3kht_A	144	Response regulator; PSI-II, 11023K, structural gen	89.21
3h1g_A	129	Chemotaxis protein CHEY homolog; sulfate-bound CHE	89.0
1k68_A	140	Phytochrome response regulator RCPA; phosphorylate	88.73
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	88.61
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	88.53
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	88.27
1ydw_A	362	AX110P-like protein; structural genomics, protein	88.21
3heb_A	152	Response regulator receiver domain protein (CHEY);	88.19
2iz6_A	176	Molybdenum cofactor carrier protein; metal transpo	88.15
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	87.69
1vi6_A	208	30S ribosomal protein S2P; structural genomics, ri	87.6
3mm4_A	206	Histidine kinase homolog; receiver domain, CKI1, c	87.25
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	86.87
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	86.39
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	86.22
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	86.14
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	86.07
3dty_A	398	Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram	85.67
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	85.36
3u5c_A	252	40S ribosomal protein S0-A; translation, ribosome,	85.34
3nbm_A	108	PTS system, lactose-specific IIBC components; PTS_	85.11
3iz6_A	305	40S ribosomal protein SA (S2P); eukaryotic ribosom	85.1
1h6d_A	433	Precursor form of glucose-fructose oxidoreductase;	84.62
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	84.31
1k66_A	149	Phytochrome response regulator RCPB; CHEY homologu	83.82
1i3c_A	149	Response regulator RCP1; phytochrome, signaling pr	83.77
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	83.58
4h3v_A	390	Oxidoreductase domain protein; structural genomics	83.55
3u80_A	151	3-dehydroquinate dehydratase, type II; structural	83.51
2czc_A	334	Glyceraldehyde-3-phosphate dehydrogenase; glycolys	83.43
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	82.97
2hqs_H	118	Peptidoglycan-associated lipoprotein; TOLB, PAL, T	82.6
2aiz_P	134	Outer membrane protein P6; alpha-beta sandwich; HE	82.56
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	82.2
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	81.79
2kgw_A	129	Outer membrane protein A; OMPA-L membrane, transme	81.66
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	81.63
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	81.62
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	81.19
3td3_A	123	Outer membrane protein OMP38; OMPA-like fold, cell	81.08
2qvg_A	143	Two component response regulator; NYSGXRC, PSI-2,	80.85
1rcu_A	195	Conserved hypothetical protein VT76; structural ge	80.7
4fyk_A	152	Deoxyribonucleoside 5'-monophosphate N-glycosidas;	80.62
1vs1_A	276	3-deoxy-7-phosphoheptulonate synthase; (beta/alpha	80.11
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	80.1

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=100.00  E-value=2.4e-35  Score=247.35  Aligned_cols=130  Identities=73%  Similarity=1.155  Sum_probs=124.8

Q ss_pred             ChHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          1 MSDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         1 ~~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      ++|++||+++||++|+++..+...++.+++.++++|++++||+|.+..+.++|++.|+.+||+|||||++||+|++||||
T Consensus       541 ~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~  620 (723)
T 4gyw_A          541 QMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLW  620 (723)
T ss_dssp             HHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHH
Confidence            37999999999999999997656788999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      |||||||+.|+.+++|+++++|+.+|+++||+.|.++|+++|++|++|++
T Consensus       621 ~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~d~~  670 (723)
T 4gyw_A          621 AGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGTDLE  670 (723)
T ss_dssp             TTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCHH
T ss_pred             cCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhcCHH
Confidence            99999999999999999999999999999999999999999999999864

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.97  E-value=9.5e-32  Score=221.56  Aligned_cols=128  Identities=16%  Similarity=0.132  Sum_probs=114.6

Q ss_pred             ChHHHHHhhCCCcEEEE--eec-CcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHH
Q psy15363          1 MSDIFVLKAVPNSILWL--LKF-PAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMD   77 (130)
Q Consensus         1 ~~w~~il~~~P~a~l~i--~g~-~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lE   77 (130)
                      ++|++|++++|+++|++  +|. .+..... .+.+.++|++ +||+|.|.++.+++++.|+.+||||||||++||+|++|
T Consensus       459 ~~WarIL~~vP~s~L~l~~~g~~~g~~~~~-~~~~~~~GI~-~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlE  536 (631)
T 3q3e_A          459 EALKAIRDRAKVKVHFHFALGQSNGITHPY-VERFIKSYLG-DSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIID  536 (631)
T ss_dssp             HHHHHHHHHCSSEEEEEEEESSCCGGGHHH-HHHHHHHHHG-GGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHH
T ss_pred             HHHHHHHHhCCCcEEEEEecCCCchhhHHH-HHHHHHcCCC-ccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHH
Confidence            37999999999998864  553 2233444 4456788998 89999999999999999999999999999999999999


Q ss_pred             HHhcCCcEEecCCCchhhhhHHHHHHhcCCCCc-eecCHHHHHHHHHHhccCCC
Q psy15363         78 VLWTGTPVVTLPGETLASRVAASQLATLGCPEL-IARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        78 Ala~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~-va~~~~~y~~~a~~l~~d~e  130 (130)
                      |||||+||||+.|+.+++|+++++++.+|++|| |++|.++|+++|++|++|++
T Consensus       537 ALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D~~  590 (631)
T 3q3e_A          537 MVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAENHQ  590 (631)
T ss_dssp             HHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHCHH
T ss_pred             HHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCCHH
Confidence            999999999999999999999999999999995 99999999999999999974

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=99.93  E-value=2.5e-25  Score=179.51  Aligned_cols=129  Identities=40%  Similarity=0.597  Sum_probs=120.5

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhc
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT   81 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~   81 (130)
                      +|.+++++.|+++|+++|.+++.++.+++.++++|++++||+|+|+++.+++..+|+.+|+|+.|+++++|++++|||+|
T Consensus       396 a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma~  475 (568)
T 2vsy_A          396 RMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWT  475 (568)
T ss_dssp             HHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHT
T ss_pred             HHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHhC
Confidence            68999999999999999933677889999999999965899999999999999999999999999988889999999999


Q ss_pred             CCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         82 GTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        82 G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      |+|||+.+|..+.++.+++++...|++++|.+|.++|++.+.+|++|++
T Consensus       476 G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~~~~~la~~i~~l~~~~~  524 (568)
T 2vsy_A          476 GCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVALASDPA  524 (568)
T ss_dssp             TCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCHH
T ss_pred             CCCEEeccCCCchHHHHHHHHHHCCChhhhcCCHHHHHHHHHHHhcCHH
Confidence            9999999999999999999999999999999999999999999998863

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.75  E-value=6e-18  Score=118.63  Aligned_cols=119  Identities=13%  Similarity=0.137  Sum_probs=95.7

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHH--HcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQ--ALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~--~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      .+.+++.|+.+|+++|. ++..+.++++++  ++|+. ++|+|.|+++.+++..+|+.+|+++.|+. +++|++++|||+
T Consensus        42 i~a~~~l~~~~l~i~G~-~~~~~~l~~~~~~~~~~l~-~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama  119 (177)
T 2f9f_A           42 LEVFKKLQDEKLYIVGW-FSKGDHAERYARKIMKIAP-DNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMA  119 (177)
T ss_dssp             HHHHHHCTTSCEEEEBC-CCTTSTHHHHHHHHHHHSC-TTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHH
T ss_pred             HHHHHhCCCcEEEEEec-CccHHHHHHHHHhhhcccC-CcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHH
Confidence            35566779999999996 566677888888  88997 99999999999999999999999998764 678999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCce-ecCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELI-ARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~v-a~~~~~y~~~a~~l~~d~e  130 (130)
                      ||+|||+.+.....     .++. .+..+++ ..|.+++++...++++|++
T Consensus       120 ~G~PvI~~~~~~~~-----e~i~-~~~~g~~~~~d~~~l~~~i~~l~~~~~  164 (177)
T 2f9f_A          120 SGKPVIAVNEGGFK-----ETVI-NEKTGYLVNADVNEIIDAMKKVSKNPD  164 (177)
T ss_dssp             TTCCEEEESSHHHH-----HHCC-BTTTEEEECSCHHHHHHHHHHHHHCTT
T ss_pred             cCCcEEEeCCCCHH-----HHhc-CCCccEEeCCCHHHHHHHHHHHHhCHH
Confidence            99999998643221     1221 2444544 5899999999999998875

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=99.73  E-value=8.3e-18  Score=130.30  Aligned_cols=120  Identities=12%  Similarity=0.031  Sum_probs=95.9

Q ss_pred             hHHHHHhhCCCcEEEEeecCccc------HHHHHHHHHHcCCCCCC-------EEEecCCCHHHHHHhhccccEEEcCCC
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVG------EANIQATAQALGLDQHR-------ILFSNVAAKEEHVRRGQLADVCLDTPL   68 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~------~~~l~~~~~~~g~~~~r-------v~f~g~~~~~~~~~~~~~~Dv~l~~~~   68 (130)
                      +|.++.++.|+.+|+++|.+ +.      ++.++++++++|++ ++       |.|.|+++.+++..+|+.||+++.|+.
T Consensus       205 a~~~l~~~~~~~~l~ivG~g-~~~~~~~l~~~~~~~~~~~~l~-~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~  282 (413)
T 3oy2_A          205 AAARFISKYPDAKVRFLCNS-HHESKFDLHSIALRELVASGVD-NVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS  282 (413)
T ss_dssp             HHHHHHHHCTTCCEEEEEEC-CTTCSCCHHHHHHHHHHHHTCS-CHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS
T ss_pred             HHHHHHHhCCCcEEEEEeCC-cccchhhHHHHHHHHHHHcCcc-cccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC
Confidence            67888899999999999964 43      37899999999997 87       888899999999999999999998885


Q ss_pred             -CCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhc-----------------CCCCcee-cCHHHHHHHHHHhccCC
Q psy15363         69 -CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATL-----------------GCPELIA-RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        69 -~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~-----------------g~~~~va-~~~~~y~~~a~~l~~d~  129 (130)
                       +++|++++|||+||+|||+++.....     .++..-                 |+.+++. .|.+++.+.. ++++|+
T Consensus       283 ~E~~~~~~lEAma~G~PvI~s~~~g~~-----e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~  356 (413)
T 3oy2_A          283 GEGFGLCSAEGAVLGKPLIISAVGGAD-----DYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDE  356 (413)
T ss_dssp             CCSSCHHHHHHHTTTCCEEEECCHHHH-----HHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSH
T ss_pred             cCCCCcHHHHHHHcCCCEEEcCCCChH-----HHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCH
Confidence             57899999999999999998643221     222110                 2222443 5899999999 999876

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.73  E-value=1.2e-17  Score=117.87  Aligned_cols=116  Identities=8%  Similarity=0.021  Sum_probs=94.8

Q ss_pred             hHHHHH--hhCCCcEEEEeecCcc--cHHHHHHHHHHcCCCCCCEEE-ecCCCHHHHHHhhccccEEEcCCC-CCCchHH
Q psy15363          2 SDIFVL--KAVPNSILWLLKFPAV--GEANIQATAQALGLDQHRILF-SNVAAKEEHVRRGQLADVCLDTPL-CNGHTTS   75 (130)
Q Consensus         2 ~w~~il--~~~P~a~l~i~g~~~~--~~~~l~~~~~~~g~~~~rv~f-~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~   75 (130)
                      +|.++.  ++.|+.+|+++|. ++  ..+.+++++++++    +|+| .|+++.+++..+|+.||+++.|+. +++|+++
T Consensus        58 a~~~l~~~~~~~~~~l~i~G~-~~~~~~~~l~~~~~~~~----~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~  132 (200)
T 2bfw_A           58 AIEILSSKKEFQEMRFIIIGK-GDPELEGWARSLEEKHG----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVA  132 (200)
T ss_dssp             HHHHHTTSGGGGGEEEEEECC-BCHHHHHHHHHHHHHCT----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHH
T ss_pred             HHHHHHhhccCCCeEEEEECC-CChHHHHHHHHHHHhcC----CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHH
Confidence            466666  7779999999996 56  6778899998876    9999 999999999999999999998885 4679999


Q ss_pred             HHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc-CC
Q psy15363         76 MDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT-DR  129 (130)
Q Consensus        76 lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~-d~  129 (130)
                      +|||+||+|||+.+....     ..++  .+-.+++.+  |.+++.+...++++ |+
T Consensus       133 ~Ea~a~G~PvI~~~~~~~-----~e~~--~~~~g~~~~~~~~~~l~~~i~~l~~~~~  182 (200)
T 2bfw_A          133 LEAMCLGAIPIASAVGGL-----RDII--TNETGILVKAGDPGELANAILKALELSR  182 (200)
T ss_dssp             HHHHHTTCEEEEESCHHH-----HHHC--CTTTCEEECTTCHHHHHHHHHHHHHCCH
T ss_pred             HHHHHCCCCEEEeCCCCh-----HHHc--CCCceEEecCCCHHHHHHHHHHHHhcCH
Confidence            999999999999864311     2223  355666664  89999999999988 75

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=99.73  E-value=1.6e-17  Score=129.46  Aligned_cols=121  Identities=21%  Similarity=0.212  Sum_probs=96.5

Q ss_pred             hHHHHHhhCC--CcEEEEeecC---cccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHH
Q psy15363          2 SDIFVLKAVP--NSILWLLKFP---AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTS   75 (130)
Q Consensus         2 ~w~~il~~~P--~a~l~i~g~~---~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~   75 (130)
                      +|.++.++.|  +.+|+++|..   ++..+.++++++++|+. ++|+|+|+++.+++..+|+.||+++.|+. +++|+++
T Consensus       264 a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~-~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~  342 (438)
T 3c48_A          264 AVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVE-KRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVA  342 (438)
T ss_dssp             HHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCT-TTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHH
T ss_pred             HHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCC-CcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHH
Confidence            5778888888  8999999951   35567899999999997 99999999999999999999999998875 5679999


Q ss_pred             HHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhccCC
Q psy15363         76 MDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDR  129 (130)
Q Consensus        76 lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~d~  129 (130)
                      +|||+||+|||+.+......     ++. .|..+++.+  |.+++.+...++++|+
T Consensus       343 ~Eama~G~PvI~~~~~~~~e-----~i~-~~~~g~~~~~~d~~~la~~i~~l~~~~  392 (438)
T 3c48_A          343 MEAQASGTPVIAARVGGLPI-----AVA-EGETGLLVDGHSPHAWADALATLLDDD  392 (438)
T ss_dssp             HHHHHTTCCEEEESCTTHHH-----HSC-BTTTEEEESSCCHHHHHHHHHHHHHCH
T ss_pred             HHHHHcCCCEEecCCCChhH-----Hhh-CCCcEEECCCCCHHHHHHHHHHHHcCH
Confidence            99999999999987543322     221 244555554  8999999999988875

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=99.73  E-value=1.3e-17  Score=127.55  Aligned_cols=117  Identities=15%  Similarity=0.141  Sum_probs=97.7

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC--------CCCch
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--------CNGHT   73 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--------~~~g~   73 (130)
                      +|.++.++.|+.+|+++|. ++..+.+++++  .++. ++|+|+|+++.+++..+|+.||+++.|+.        +++|+
T Consensus       219 a~~~l~~~~~~~~l~i~G~-g~~~~~l~~~~--~~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~  294 (394)
T 3okp_A          219 AMPQVIAARPDAQLLIVGS-GRYESTLRRLA--TDVS-QNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGI  294 (394)
T ss_dssp             HHHHHHHHSTTCEEEEECC-CTTHHHHHHHT--GGGG-GGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCH
T ss_pred             HHHHHHhhCCCeEEEEEcC-chHHHHHHHHH--hccc-CeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCc
Confidence            5777888889999999996 67788888887  6776 89999999999999999999999998885        56799


Q ss_pred             HHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhccCC
Q psy15363         74 TSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDR  129 (130)
Q Consensus        74 ~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~d~  129 (130)
                      +++|||++|+|||+.+......-+.      .| .+++.+  |.+++++...++++|+
T Consensus       295 ~~~Ea~a~G~PvI~~~~~~~~e~i~------~~-~g~~~~~~d~~~l~~~i~~l~~~~  345 (394)
T 3okp_A          295 VYLEAQACGVPVIAGTSGGAPETVT------PA-TGLVVEGSDVDKLSELLIELLDDP  345 (394)
T ss_dssp             HHHHHHHTTCCEEECSSTTGGGGCC------TT-TEEECCTTCHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHcCCCEEEeCCCChHHHHh------cC-CceEeCCCCHHHHHHHHHHHHhCH
Confidence            9999999999999987654433322      24 666655  8999999999998875

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=99.73  E-value=1.6e-17  Score=128.94  Aligned_cols=120  Identities=18%  Similarity=0.173  Sum_probs=96.8

Q ss_pred             hHHHHHhhCCCcEEEEeecCccc-----HHHHHHHHHHcCCCCCCEEEecCCC---HHHHHHhhccccEEEcCCC-CCCc
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVG-----EANIQATAQALGLDQHRILFSNVAA---KEEHVRRGQLADVCLDTPL-CNGH   72 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~-----~~~l~~~~~~~g~~~~rv~f~g~~~---~~~~~~~~~~~Dv~l~~~~-~~~g   72 (130)
                      +|.++.++.|+.+|+++|+ ++.     .+.++++++++|+. ++|+|+|+++   .+++..+|+.+|+++.|+. +++|
T Consensus       252 a~~~l~~~~~~~~l~i~G~-g~~~~~~~~~~l~~~~~~~~~~-~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~  329 (416)
T 2x6q_A          252 IYRKVKEKIPGVQLLLVGV-MAHDDPEGWIYFEKTLRKIGED-YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFG  329 (416)
T ss_dssp             HHHHHHHHCTTCEEEEEEC-CCTTCHHHHHHHHHHHHHHTTC-TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSC
T ss_pred             HHHHHHHhCCCeEEEEEec-CcccchhHHHHHHHHHHHhCCC-CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCc
Confidence            5778888899999999997 432     56788899999997 9999999654   7889999999999998875 5679


Q ss_pred             hHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         73 TTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        73 ~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      ++++|||+||+|||+.+....     ..++ ..|..+++.+|.+++.+...++++|+
T Consensus       330 ~~~lEAma~G~PvI~~~~~g~-----~e~i-~~~~~g~l~~d~~~la~~i~~ll~~~  380 (416)
T 2x6q_A          330 LTVTEAMWKGKPVIGRAVGGI-----KFQI-VDGETGFLVRDANEAVEVVLYLLKHP  380 (416)
T ss_dssp             HHHHHHHHTTCCEEEESCHHH-----HHHC-CBTTTEEEESSHHHHHHHHHHHHHCH
T ss_pred             cHHHHHHHcCCCEEEccCCCC-----hhhe-ecCCCeEEECCHHHHHHHHHHHHhCH
Confidence            999999999999999874311     1222 12556777779999999999998875

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.70  E-value=2.7e-17  Score=113.16  Aligned_cols=111  Identities=14%  Similarity=0.102  Sum_probs=86.6

Q ss_pred             hhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhcCC-cE
Q psy15363          8 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTGT-PV   85 (130)
Q Consensus         8 ~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G~-Pv   85 (130)
                      ++.|+.+|+++|. ++..+.++++++++|+   ++.| |+++.+++..+|+.||+++.|+. +++|++++|||+||+ ||
T Consensus        28 ~~~~~~~l~i~G~-g~~~~~~~~~~~~~~~---~v~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPv  102 (166)
T 3qhp_A           28 KYKQDIVLLLKGK-GPDEKKIKLLAQKLGV---KAEF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPV  102 (166)
T ss_dssp             TTGGGEEEEEECC-STTHHHHHHHHHHHTC---EEEC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEE
T ss_pred             ccCCCeEEEEEeC-CccHHHHHHHHHHcCC---eEEE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcE
Confidence            3458999999996 6788899999999986   8999 99999999999999999998885 567999999999997 99


Q ss_pred             EecC-CCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         86 VTLP-GETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        86 V~~~-g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      |++. ......-+.     ..+. -+...|.+++.+...++++|+
T Consensus       103 i~~~~~~~~~~~~~-----~~~~-~~~~~~~~~l~~~i~~l~~~~  141 (166)
T 3qhp_A          103 IANSPLSATRQFAL-----DERS-LFEPNNAKDLSAKIDWWLENK  141 (166)
T ss_dssp             EECCTTCGGGGGCS-----SGGG-EECTTCHHHHHHHHHHHHHCH
T ss_pred             EeeCCCCchhhhcc-----CCce-EEcCCCHHHHHHHHHHHHhCH
Confidence            9943 332221111     1111 223368999999999988875

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=99.68  E-value=8.1e-17  Score=123.75  Aligned_cols=117  Identities=14%  Similarity=0.072  Sum_probs=95.4

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC--CCCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP--LCNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~--~~~~g~~~lEAl   79 (130)
                      +|.++.++.|+.+|+++|. ++. +.++++++++  . ++|.|.|+++.+++..+|+.+|+++.|+  .+++|++++|||
T Consensus       230 a~~~l~~~~~~~~l~i~G~-~~~-~~l~~~~~~~--~-~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~  304 (406)
T 2gek_A          230 ALPKLVARFPDVEILIVGR-GDE-DELREQAGDL--A-GHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAM  304 (406)
T ss_dssp             HHHHHHTTSTTCEEEEESC-SCH-HHHHHHTGGG--G-GGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHH
T ss_pred             HHHHHHHHCCCeEEEEEcC-CcH-HHHHHHHHhc--c-CcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHH
Confidence            5677778889999999996 455 7888888876  3 8999999999999999999999999885  467799999999


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +||+|||+.+.....     .++. .|..+++.  .|.+++++...++++|+
T Consensus       305 a~G~PvI~~~~~~~~-----e~i~-~~~~g~~~~~~d~~~l~~~i~~l~~~~  350 (406)
T 2gek_A          305 AAGTAVVASDLDAFR-----RVLA-DGDAGRLVPVDDADGMAAALIGILEDD  350 (406)
T ss_dssp             HHTCEEEECCCHHHH-----HHHT-TTTSSEECCTTCHHHHHHHHHHHHHCH
T ss_pred             HcCCCEEEecCCcHH-----HHhc-CCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence            999999998753222     2222 25566666  68999999999998875

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=99.68  E-value=3.5e-16  Score=120.95  Aligned_cols=118  Identities=7%  Similarity=0.013  Sum_probs=95.3

Q ss_pred             hHHHHHhhC--CCcEEEEeecCcccH--HHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHH
Q psy15363          2 SDIFVLKAV--PNSILWLLKFPAVGE--ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSM   76 (130)
Q Consensus         2 ~w~~il~~~--P~a~l~i~g~~~~~~--~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~l   76 (130)
                      +|.++.++.  |+.+|+++|. ++..  +.+++++++++   +++.|.|+++.+++..+|+.||+++.|+. +++|++++
T Consensus       273 a~~~l~~~~~~~~~~l~i~G~-g~~~~~~~l~~~~~~~~---~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~  348 (439)
T 3fro_A          273 AIEILSSKKEFQEMRFIIIGK-GDPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVAL  348 (439)
T ss_dssp             HHHHHHTSGGGGGEEEEEECC-CCHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHH
T ss_pred             HHHHHHhcccCCCeEEEEEcC-CChhHHHHHHHHHhhcC---CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHH
Confidence            466666666  9999999996 5655  88999999988   68999999999999999999999998875 56799999


Q ss_pred             HHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc-CCC
Q psy15363         77 DVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT-DRD  130 (130)
Q Consensus        77 EAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~-d~e  130 (130)
                      |||+||+|||+++.....     .++. .| .+++.+  |.+++.+...++++ |++
T Consensus       349 EAma~G~Pvi~s~~~~~~-----e~~~-~~-~g~~~~~~d~~~la~~i~~ll~~~~~  398 (439)
T 3fro_A          349 EAMCLGAIPIASAVGGLR-----DIIT-NE-TGILVKAGDPGELANAILKALELSRS  398 (439)
T ss_dssp             HHHHTTCEEEEESSTHHH-----HHCC-TT-TCEEECTTCHHHHHHHHHHHHHHTTT
T ss_pred             HHHHCCCCeEEcCCCCcc-----eeEE-cC-ceEEeCCCCHHHHHHHHHHHHhcCHH
Confidence            999999999998654222     2222 25 565554  89999999999988 764

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=99.67  E-value=9.7e-17  Score=127.63  Aligned_cols=121  Identities=9%  Similarity=-0.012  Sum_probs=93.7

Q ss_pred             hHHHHHhhCCCc-EEEEeecC-cc----------c---HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccc----cE
Q psy15363          2 SDIFVLKAVPNS-ILWLLKFP-AV----------G---EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA----DV   62 (130)
Q Consensus         2 ~w~~il~~~P~a-~l~i~g~~-~~----------~---~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~----Dv   62 (130)
                      +|.++.++.|+. +|+++|+. ++          .   .+.++++++++|+. ++|+|+|+++.+++..+|+.|    |+
T Consensus       283 a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~-~~V~~~G~v~~~~~~~~~~~a~~~~dv  361 (499)
T 2r60_A          283 AYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCR-GKVSMFPLNSQQELAGCYAYLASKGSV  361 (499)
T ss_dssp             HHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-TTEEEEECCSHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCC-ceEEECCCCCHHHHHHHHHhcCcCCCE
Confidence            345555555654 78888851 22          1   67899999999997 999999999999999999999    99


Q ss_pred             EEcCCC-CCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         63 CLDTPL-CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        63 ~l~~~~-~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      ++.|+. +++|++++|||+||+|||+++......     ++. .|..+++.  .|.+++.+...++++|+
T Consensus       362 ~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e-----~v~-~~~~g~l~~~~d~~~la~~i~~ll~~~  425 (499)
T 2r60_A          362 FALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAE-----ILD-GGKYGVLVDPEDPEDIARGLLKAFESE  425 (499)
T ss_dssp             EEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHH-----HTG-GGTSSEEECTTCHHHHHHHHHHHHSCH
T ss_pred             EEECcccCCCCcHHHHHHHcCCCEEEecCCCHHH-----Hhc-CCceEEEeCCCCHHHHHHHHHHHHhCH
Confidence            998875 567999999999999999987542222     222 24456554  48899999999998875

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=99.66  E-value=2e-16  Score=124.86  Aligned_cols=113  Identities=8%  Similarity=-0.041  Sum_probs=88.8

Q ss_pred             hHHHHHhhCCC---cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHH
Q psy15363          2 SDIFVLKAVPN---SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMD   77 (130)
Q Consensus         2 ~w~~il~~~P~---a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lE   77 (130)
                      +|+++.++.|+   .+|+++|+ ++.+       .++|+. ++|+|+|.++.+++..+|+.||+|+.|+. +++|++++|
T Consensus       263 A~~~l~~~~~~~~~~~l~ivG~-~~~~-------~~l~~~-~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lE  333 (413)
T 2x0d_A          263 ALKIFVQKYDRSNEWKIISVGE-KHKD-------IALGKG-IHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLE  333 (413)
T ss_dssp             HHHHHHHHCTTGGGCEEEEEES-CCCC-------EEEETT-EEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHH
T ss_pred             HHHHHHHhCCCCCceEEEEEcC-Cchh-------hhcCCc-CcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHH
Confidence            56777788886   89999996 4432       356776 89999999999999999999999998885 678999999


Q ss_pred             HHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCCC
Q psy15363         78 VLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        78 Ala~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      |||||+|||+..+. ...     ++ ..|.++++.  .|++++.+...+|++|++
T Consensus       334 AmA~G~PVV~~~~g-~~e-----~v-~~~~~G~lv~~~d~~~la~ai~~ll~~~~  381 (413)
T 2x0d_A          334 MAHFGLRVITNKYE-NKD-----LS-NWHSNIVSLEQLNPENIAETLVELCMSFN  381 (413)
T ss_dssp             HHHTTCEEEEECBT-TBC-----GG-GTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred             HHhCCCcEEEeCCC-cch-----hh-hcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence            99999999996543 111     12 225556543  589999999999998874

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=99.65  E-value=1.2e-16  Score=123.29  Aligned_cols=117  Identities=15%  Similarity=0.132  Sum_probs=92.9

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|.++.++ ++.+|+++|. ++..+.++++++++|+. ++|.|+|+.  +++..+|+.||+++.|+. +++|++++|||+
T Consensus       232 a~~~l~~~-~~~~l~i~G~-g~~~~~l~~~~~~~~l~-~~v~~~g~~--~~~~~~~~~adv~v~ps~~e~~~~~~~EAma  306 (394)
T 2jjm_A          232 AFAKIVTE-VDAKLLLVGD-GPEFCTILQLVKNLHIE-DRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMA  306 (394)
T ss_dssp             HHHHHHHS-SCCEEEEECC-CTTHHHHHHHHHTTTCG-GGBCCCBSC--SCTHHHHHTCSEEEECCSCCSCCHHHHHHHH
T ss_pred             HHHHHHhh-CCCEEEEECC-chHHHHHHHHHHHcCCC-CeEEEeCch--hhHHHHHHhCCEEEeccccCCCchHHHHHHh
Confidence            45666655 6799999996 67888999999999997 999999964  678889999999998885 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+.+......-+      ..|..+++.+  |.+++.+...++++|+
T Consensus       307 ~G~PvI~~~~~~~~e~v------~~~~~g~~~~~~d~~~la~~i~~l~~~~  351 (394)
T 2jjm_A          307 CGVPCIGTRVGGIPEVI------QHGDTGYLCEVGDTTGVADQAIQLLKDE  351 (394)
T ss_dssp             TTCCEEEECCTTSTTTC------CBTTTEEEECTTCHHHHHHHHHHHHHCH
T ss_pred             cCCCEEEecCCChHHHh------hcCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence            99999998754332211      1144555554  8999999999998875

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=99.63  E-value=1.9e-16  Score=120.54  Aligned_cols=116  Identities=15%  Similarity=0.155  Sum_probs=89.9

Q ss_pred             HHHHHhh-CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          3 DIFVLKA-VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         3 w~~il~~-~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      |.++.++ .|+.+|+++|. ++ .+.++++++++|+. ++|+|+|+.  +++..+|+.||+++.|+. +++|++++|||+
T Consensus       218 ~~~l~~~~~~~~~l~i~G~-g~-~~~~~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a  292 (374)
T 2iw1_A          218 LASLPESLRHNTLLFVVGQ-DK-PRKFEALAEKLGVR-SNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAIT  292 (374)
T ss_dssp             HHTSCHHHHHTEEEEEESS-SC-CHHHHHHHHHHTCG-GGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHH
T ss_pred             HHHhHhccCCceEEEEEcC-CC-HHHHHHHHHHcCCC-CcEEECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHH
Confidence            3344444 47899999996 44 46789999999997 999999974  678899999999998875 567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+.+......     ++.. |..+++.+   |.+++.+...++++|+
T Consensus       293 ~G~Pvi~~~~~~~~e-----~i~~-~~~g~~~~~~~~~~~l~~~i~~l~~~~  338 (374)
T 2iw1_A          293 AGLPVLTTAVCGYAH-----YIAD-ANCGTVIAEPFSQEQLNEVLRKALTQS  338 (374)
T ss_dssp             HTCCEEEETTSTTTH-----HHHH-HTCEEEECSSCCHHHHHHHHHHHHHCH
T ss_pred             CCCCEEEecCCCchh-----hhcc-CCceEEeCCCCCHHHHHHHHHHHHcCh
Confidence            999999987543333     2222 34455443   8999999999998875

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=99.63  E-value=3.1e-15  Score=113.30  Aligned_cols=106  Identities=17%  Similarity=0.074  Sum_probs=86.2

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-----------CCCchHHHHHHh
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-----------CNGHTTSMDVLW   80 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-----------~~~g~~~lEAla   80 (130)
                      +.+|+++|. ++.++.++++++++|   ++|+|+|+++.+++..+|+.||+++.|+.           +++|++++|||+
T Consensus       188 ~~~l~i~G~-g~~~~~l~~~~~~~~---~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma  263 (342)
T 2iuy_A          188 GRRLVLAGP-AWEPEYFDEITRRYG---STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAV  263 (342)
T ss_dssp             TCCEEEESC-CCCHHHHHHHHHHHT---TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHH
T ss_pred             CcEEEEEeC-cccHHHHHHHHHHhC---CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHh
Confidence            799999996 578889999988887   79999999999999999999999998876           567999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhc-CCCCceec-CHHHHHHHHHHhc
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATL-GCPELIAR-THKEYQDIAIRLG  126 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~-g~~~~va~-~~~~y~~~a~~l~  126 (130)
                      ||+|||+++.....     .++... |..+++.+ |.+++.+...+++
T Consensus       264 ~G~PvI~s~~~~~~-----e~~~~~~~~~g~~~~~d~~~l~~~i~~l~  306 (342)
T 2iuy_A          264 SGTPVVGTGNGCLA-----EIVPSVGEVVGYGTDFAPDEARRTLAGLP  306 (342)
T ss_dssp             TTCCEEECCTTTHH-----HHGGGGEEECCSSSCCCHHHHHHHHHTSC
T ss_pred             cCCCEEEcCCCChH-----HHhcccCCCceEEcCCCHHHHHHHHHHHH
Confidence            99999998754322     233221 44566665 8899988887765

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=99.61  E-value=1.9e-15  Score=118.61  Aligned_cols=106  Identities=8%  Similarity=0.007  Sum_probs=88.1

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHH--
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVL--   79 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl--   79 (130)
                      +..+.++.|+.+|+++|+ |+        ++++|+. ++|+|+|+++.+++..+|+.||+|+.|+. +++|++++|||  
T Consensus       238 ~~~l~~~~~~~~l~ivG~-g~--------~~~~~l~-~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~K  307 (406)
T 2hy7_A          238 FVVASKAFPQVTFHVIGS-GM--------GRHPGYG-DNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMK  307 (406)
T ss_dssp             HHHHHHHCTTEEEEEESC-SS--------CCCTTCC-TTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHH
T ss_pred             HHHHHHhCCCeEEEEEeC-ch--------HHhcCCC-CCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHH
Confidence            456778899999999996 44        5677886 99999999999999999999999998875 56799999999  


Q ss_pred             -----hcCCcEEecCCCchhhhhHHHHHHhcCCCCce-e--cCHHHHHHHHHHhccCCC
Q psy15363         80 -----WTGTPVVTLPGETLASRVAASQLATLGCPELI-A--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        80 -----a~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~v-a--~~~~~y~~~a~~l~~d~e  130 (130)
                           +||+|||+++.           + ..|..+++ .  .|.+++++...++++|++
T Consensus       308 l~eYla~G~PVIas~~-----------v-~~~~~G~l~v~~~d~~~la~ai~~ll~~~~  354 (406)
T 2hy7_A          308 LLQYDFFGLPAVCPNA-----------V-VGPYKSRFGYTPGNADSVIAAITQALEAPR  354 (406)
T ss_dssp             HHHHHHHTCCEEEEGG-----------G-TCSCSSEEEECTTCHHHHHHHHHHHHHCCC
T ss_pred             HHHHhhCCCcEEEehh-----------c-ccCcceEEEeCCCCHHHHHHHHHHHHhCcc
Confidence                 99999999753           1 12445554 3  589999999999998875

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=99.58  E-value=1.9e-15  Score=128.38  Aligned_cols=120  Identities=10%  Similarity=-0.058  Sum_probs=92.5

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc-----------cHHHHHHHHHHcCCCCCCEEEecCCC----HHHHHHhhc-cccEEEc
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV-----------GEANIQATAQALGLDQHRILFSNVAA----KEEHVRRGQ-LADVCLD   65 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~-----------~~~~l~~~~~~~g~~~~rv~f~g~~~----~~~~~~~~~-~~Dv~l~   65 (130)
                      +|+++.+..|+++|+|+|+ ++           ..+.++++++++|+. ++|.|+|.++    .+++..+|+ .+|+|+.
T Consensus       593 A~~~L~~~~~~v~LvIvG~-g~~~~~~~~e~~~~~~~L~~li~~lgL~-~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~  670 (816)
T 3s28_A          593 WYGKNTRLRELANLVVVGG-DRRKESKDNEEKAEMKKMYDLIEEYKLN-GQFRWISSQMDRVRNGELYRYICDTKGAFVQ  670 (816)
T ss_dssp             HHHHCHHHHHHCEEEEECC-CTTSCCCCHHHHHHHHHHHHHHHHTTCB-BBEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHhhCCCeEEEEEeC-CCcccccchhhHHHHHHHHHHHHHcCCC-CcEEEccCccccCCHHHHHHHHHhcCeEEEE
Confidence            4566666678999999997 45           457889999999997 9999999554    578888888 6899998


Q ss_pred             CCC-CCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhc----cCC
Q psy15363         66 TPL-CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG----TDR  129 (130)
Q Consensus        66 ~~~-~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~----~d~  129 (130)
                      |+. +++|++++|||+||+|||+++......-     + ..|..+++.+  |.+++++...+++    +|+
T Consensus       671 PS~~EgfglvllEAMA~G~PVIasd~GG~~Ei-----V-~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~  735 (816)
T 3s28_A          671 PALYEAFGLTVVEAMTCGLPTFATCKGGPAEI-----I-VHGKSGFHIDPYHGDQAADTLADFFTKCKEDP  735 (816)
T ss_dssp             CCSCBSSCHHHHHHHHTTCCEEEESSBTHHHH-----C-CBTTTBEEECTTSHHHHHHHHHHHHHHHHHCT
T ss_pred             CCCccCccHHHHHHHHcCCCEEEeCCCChHHH-----H-ccCCcEEEeCCCCHHHHHHHHHHHHHHhccCH
Confidence            875 5789999999999999999865433222     2 2255666654  7889988886665    665

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.56  E-value=2.7e-14  Score=111.13  Aligned_cols=121  Identities=12%  Similarity=0.072  Sum_probs=88.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccH-HHHHHHHHHcCCCC-------CCEEEecCCCHHHHHHhhccccEEEcCC-C-CCC
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGE-ANIQATAQALGLDQ-------HRILFSNVAAKEEHVRRGQLADVCLDTP-L-CNG   71 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~-~~l~~~~~~~g~~~-------~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~-~~~   71 (130)
                      +|+++.++.|+.+|+|+|+ ++.+ +.++++++++|+..       ++|.|.|..  +|+..+|+.||+++-++ . ..+
T Consensus       215 A~~~l~~~~p~~~lvivG~-g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~g  291 (374)
T 2xci_A          215 AFKEIKKTYSSLKLILVPR-HIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIG  291 (374)
T ss_dssp             HHHHHHTTCTTCEEEEEES-SGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSC
T ss_pred             HHHHHHhhCCCcEEEEECC-CHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCC
Confidence            5788888899999999996 5655 68999999999852       468888865  67889999999975443 3 346


Q ss_pred             chHHHHHHhcCCcEEecCC-CchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccC
Q psy15363         72 HTTSMDVLWTGTPVVTLPG-ETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        72 g~~~lEAla~G~PvV~~~g-~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d  128 (130)
                      |.+++|||+||+|||+.+. ..+..-.  ..+...|. .+...|.+++.+...+|++|
T Consensus       292 g~~~lEAmA~G~PVI~~~~~~~~~e~~--~~~~~~G~-l~~~~d~~~La~ai~~ll~d  346 (374)
T 2xci_A          292 GHNLLEPTCWGIPVIYGPYTHKVNDLK--EFLEKEGA-GFEVKNETELVTKLTELLSV  346 (374)
T ss_dssp             CCCCHHHHTTTCCEEECSCCTTSHHHH--HHHHHTTC-EEECCSHHHHHHHHHHHHHS
T ss_pred             CcCHHHHHHhCCCEEECCCccChHHHH--HHHHHCCC-EEEeCCHHHHHHHHHHHHhH
Confidence            8999999999999997532 2222211  11111232 23347899999999999887

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=99.55  E-value=4e-14  Score=111.90  Aligned_cols=115  Identities=14%  Similarity=-0.060  Sum_probs=87.5

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc--cHHHHHHHHHHcCCCCCCEE-EecCCCHHHHHHhhccccEEEcCCC-CCCchHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV--GEANIQATAQALGLDQHRIL-FSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMD   77 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~--~~~~l~~~~~~~g~~~~rv~-f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lE   77 (130)
                      +|.++.+  ++.+|+++|+ ++  .++.+++++++++   ++|+ |.|. +.+++..+|+.||+|+.|+. +++|++++|
T Consensus       312 a~~~l~~--~~~~l~ivG~-g~~~~~~~l~~~~~~~~---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lE  384 (485)
T 1rzu_A          312 AVDEIVS--LGGRLVVLGA-GDVALEGALLAAASRHH---GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLY  384 (485)
T ss_dssp             THHHHHH--TTCEEEEEEC-BCHHHHHHHHHHHHHTT---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHH
T ss_pred             HHHHHHh--cCceEEEEeC-CchHHHHHHHHHHHhCC---CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHH
Confidence            4666655  5899999996 44  4678889888875   7887 7887 77777899999999998885 577999999


Q ss_pred             HHhcCCcEEecCCCchhhhhHHHHHHhcC---------CCCceec--CHHHHHHHHHHhc---cCC
Q psy15363         78 VLWTGTPVVTLPGETLASRVAASQLATLG---------CPELIAR--THKEYQDIAIRLG---TDR  129 (130)
Q Consensus        78 Ala~G~PvV~~~g~~~~~r~~~~~l~~~g---------~~~~va~--~~~~y~~~a~~l~---~d~  129 (130)
                      ||+||+|||+++....     ..++. .|         ..+++.+  |.+++.+...+++   +|+
T Consensus       385 Ama~G~PvI~s~~gg~-----~e~v~-~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~  444 (485)
T 1rzu_A          385 ALRYGCIPVVARTGGL-----ADTVI-DANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDP  444 (485)
T ss_dssp             HHHHTCEEEEESSHHH-----HHHCC-BCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCH
T ss_pred             HHHCCCCEEEeCCCCh-----hheec-ccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCH
Confidence            9999999999864322     12221 23         4566553  8899999988887   564

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=99.54  E-value=3.8e-14  Score=111.99  Aligned_cols=115  Identities=16%  Similarity=-0.070  Sum_probs=87.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc--cHHHHHHHHHHcCCCCCCEE-EecCCCHHHHHHhhccccEEEcCCC-CCCchHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV--GEANIQATAQALGLDQHRIL-FSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMD   77 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~--~~~~l~~~~~~~g~~~~rv~-f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lE   77 (130)
                      +|+++.+  ++.+|+++|. ++  .++.+++++++++   ++|+ |.|. +.+++..+|+.||+|+.|+. +++|++++|
T Consensus       313 a~~~l~~--~~~~l~ivG~-g~~~~~~~l~~~~~~~~---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lE  385 (485)
T 2qzs_A          313 ALPGLLE--QGGQLALLGA-GDPVLQEGFLAAAAEYP---GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLY  385 (485)
T ss_dssp             HHHHHHH--TTCEEEEEEE-ECHHHHHHHHHHHHHST---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHH
T ss_pred             HHHHHhh--CCcEEEEEeC-CchHHHHHHHHHHHhCC---CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHH
Confidence            4555554  5899999996 44  4678889888875   6886 7887 77778899999999998885 567999999


Q ss_pred             HHhcCCcEEecCCCchhhhhHHHHHHhcC---------CCCceec--CHHHHHHHHHHhc---cCC
Q psy15363         78 VLWTGTPVVTLPGETLASRVAASQLATLG---------CPELIAR--THKEYQDIAIRLG---TDR  129 (130)
Q Consensus        78 Ala~G~PvV~~~g~~~~~r~~~~~l~~~g---------~~~~va~--~~~~y~~~a~~l~---~d~  129 (130)
                      ||+||+|||+++....     ..++. .|         ..+++.+  |.+++.+...+++   +|+
T Consensus       386 Ama~G~PvI~s~~gg~-----~e~v~-~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~  445 (485)
T 2qzs_A          386 GLKYGTLPLVRRTGGL-----ADTVS-DCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRP  445 (485)
T ss_dssp             HHHHTCEEEEESSHHH-----HHHCC-BCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSH
T ss_pred             HHHCCCCEEECCCCCc-----cceec-cCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCH
Confidence            9999999999864322     12222 23         5666654  8899999988887   564

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=99.50  E-value=2.1e-13  Score=103.98  Aligned_cols=113  Identities=13%  Similarity=0.094  Sum_probs=82.4

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHc-CCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQAL-GLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~-g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      +|.++.++.|+.++++ +. ++. +.+++.++++ +.. ++|+|+|.++..++..+|+.||+++.|+    |.+++|||+
T Consensus       228 a~~~l~~~~~~~~~i~-~~-g~~-~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~~s----g~~~lEA~a  299 (375)
T 3beo_A          228 AIKRLVDKHEDVQVVY-PV-HMN-PVVRETANDILGDY-GRIHLIEPLDVIDFHNVAARSYLMLTDS----GGVQEEAPS  299 (375)
T ss_dssp             HHHHHHHHCTTEEEEE-EC-CSC-HHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHTCSEEEECC----HHHHHHHHH
T ss_pred             HHHHHHhhCCCeEEEE-eC-CCC-HHHHHHHHHHhhcc-CCEEEeCCCCHHHHHHHHHhCcEEEECC----CChHHHHHh
Confidence            5677778889998655 53 333 2344444443 433 7999999999889999999999999776    566999999


Q ss_pred             cCCcEEecCC-CchhhhhHHHHHHhcCCCCcee-cCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPG-ETLASRVAASQLATLGCPELIA-RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g-~~~~~r~~~~~l~~~g~~~~va-~~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+++. ...     ..++ ..| .+++. .|.+++.+...++++|+
T Consensus       300 ~G~Pvi~~~~~~~~-----~e~v-~~g-~g~~v~~d~~~la~~i~~ll~~~  343 (375)
T 3beo_A          300 LGVPVLVLRDTTER-----PEGI-EAG-TLKLAGTDEETIFSLADELLSDK  343 (375)
T ss_dssp             HTCCEEECSSCCSC-----HHHH-HTT-SEEECCSCHHHHHHHHHHHHHCH
T ss_pred             cCCCEEEecCCCCC-----ceee-cCC-ceEEcCCCHHHHHHHHHHHHhCh
Confidence            9999998842 212     2233 235 55544 68999999999998876

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=99.49  E-value=6.5e-14  Score=107.22  Aligned_cols=113  Identities=12%  Similarity=0.052  Sum_probs=82.5

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc-cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~-~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      +|.++.++.|+.++++.+++++ .++.+++++   +.. ++|+|+|.++.+++..+|+.||+|+.++   + .+++|||+
T Consensus       228 a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~---~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~~S---g-~~~lEA~a  299 (384)
T 1vgv_A          228 ALADIATTHQDIQIVYPVHLNPNVREPVNRIL---GHV-KNVILIDPQEYLPFVWLMNHAWLILTDS---G-GIQEEAPS  299 (384)
T ss_dssp             HHHHHHHHCTTEEEEEECCBCHHHHHHHHHHH---TTC-TTEEEECCCCHHHHHHHHHHCSEEEESS---S-TGGGTGGG
T ss_pred             HHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHh---hcC-CCEEEeCCCCHHHHHHHHHhCcEEEECC---c-chHHHHHH
Confidence            5677778889999888643232 334444443   323 7999999999899999999999999777   3 44899999


Q ss_pred             cCCcEEecCC-CchhhhhHHHHHHhcCCCCcee-cCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPG-ETLASRVAASQLATLGCPELIA-RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g-~~~~~r~~~~~l~~~g~~~~va-~~~~~y~~~a~~l~~d~  129 (130)
                      ||+|||+.+. ....     .++ ..| .+++. .|.+++.+...++++|+
T Consensus       300 ~G~PvI~~~~~~~~~-----e~v-~~g-~g~lv~~d~~~la~~i~~ll~d~  343 (384)
T 1vgv_A          300 LGKPVLVMRDTTERP-----EAV-TAG-TVRLVGTDKQRIVEEVTRLLKDE  343 (384)
T ss_dssp             GTCCEEEESSCCSCH-----HHH-HHT-SEEEECSSHHHHHHHHHHHHHCH
T ss_pred             cCCCEEEccCCCCcc-----hhh-hCC-ceEEeCCCHHHHHHHHHHHHhCh
Confidence            9999999864 2221     223 236 55444 58999999999998876

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.44  E-value=4.8e-13  Score=102.39  Aligned_cols=112  Identities=12%  Similarity=0.022  Sum_probs=81.3

Q ss_pred             hHHHHHhhCCCcEEEEe-ecCcc-cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLL-KFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~-g~~~~-~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl   79 (130)
                      +|.++.++.|+.++++. |. ++ .++.++++++   .. ++|+|+|+++..++..+|+.||+|+.++   +|+ ++|||
T Consensus       220 a~~~l~~~~~~~~lv~~~g~-~~~~~~~l~~~~~---~~-~~v~~~g~~g~~~~~~~~~~ad~~v~~S---~g~-~lEA~  290 (376)
T 1v4v_A          220 ALKRVAEAFPHLTFVYPVHL-NPVVREAVFPVLK---GV-RNFVLLDPLEYGSMAALMRASLLLVTDS---GGL-QEEGA  290 (376)
T ss_dssp             HHHHHHHHCTTSEEEEECCS-CHHHHHHHHHHHT---TC-TTEEEECCCCHHHHHHHHHTEEEEEESC---HHH-HHHHH
T ss_pred             HHHHHHhhCCCeEEEEECCC-CHHHHHHHHHHhc---cC-CCEEEECCCCHHHHHHHHHhCcEEEECC---cCH-HHHHH
Confidence            46677778899998886 53 33 3556666543   23 7999999999889999999999998776   444 88999


Q ss_pred             hcCCcEEecCC-CchhhhhHHHHHHhcCCCCcee-cCHHHHHHHHHHhccCC
Q psy15363         80 WTGTPVVTLPG-ETLASRVAASQLATLGCPELIA-RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        80 a~G~PvV~~~g-~~~~~r~~~~~l~~~g~~~~va-~~~~~y~~~a~~l~~d~  129 (130)
                      +||+|||+.+. .....     +++ .|. +++. .|.+++.+...++++|+
T Consensus       291 a~G~PvI~~~~~~~~~~-----~~~-~g~-g~lv~~d~~~la~~i~~ll~d~  335 (376)
T 1v4v_A          291 ALGVPVVVLRNVTERPE-----GLK-AGI-LKLAGTDPEGVYRVVKGLLENP  335 (376)
T ss_dssp             HTTCCEEECSSSCSCHH-----HHH-HTS-EEECCSCHHHHHHHHHHHHTCH
T ss_pred             HcCCCEEeccCCCcchh-----hhc-CCc-eEECCCCHHHHHHHHHHHHhCh
Confidence            99999998642 22211     222 242 3443 79999999999998886

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=99.36  E-value=4.6e-13  Score=109.00  Aligned_cols=84  Identities=11%  Similarity=-0.056  Sum_probs=65.1

Q ss_pred             hHHHHHhhCCCcEEEEeecCccc--HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVG--EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDV   78 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~--~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEA   78 (130)
                      +|++++++  +.+++++|. |+.  ...++....++  . +++.|.+..+.++...+|+.||+|+.||. +++|++.+||
T Consensus       348 a~~~l~~~--~~~l~l~G~-G~~~~~~~~~~~~~~~--~-~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEA  421 (536)
T 3vue_A          348 AIPELMQE--DVQIVLLGT-GKKKFEKLLKSMEEKY--P-GKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQG  421 (536)
T ss_dssp             HHHHHTTS--SCEEEEECC-BCHHHHHHHHHHHHHS--T-TTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHH
T ss_pred             HHHHhHhh--CCeEEEEec-cCchHHHHHHHHHhhc--C-CceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHH
Confidence            45666554  567788885 332  33445554444  3 79999999999999999999999999886 5689999999


Q ss_pred             HhcCCcEEecCCC
Q psy15363         79 LWTGTPVVTLPGE   91 (130)
Q Consensus        79 la~G~PvV~~~g~   91 (130)
                      |+||+|||+++..
T Consensus       422 ma~G~PvI~s~~g  434 (536)
T 3vue_A          422 MRYGTPCACASTG  434 (536)
T ss_dssp             HHTTCCEEECSCT
T ss_pred             HHcCCCEEEcCCC
Confidence            9999999998754

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=99.35  E-value=3.8e-12  Score=96.74  Aligned_cols=104  Identities=13%  Similarity=0.091  Sum_probs=75.0

Q ss_pred             CcE-EEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         12 NSI-LWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        12 ~a~-l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +.+ ++++|. ++ .+.+++.++++|+  ++|+|+|++  +++..+|+.||+++.|+   +|++++|||+||+|||+++.
T Consensus       212 ~~~~l~i~G~-~~-~~~l~~~~~~~~~--~~v~~~g~~--~~~~~~~~~ad~~v~~s---g~~~~~EAma~G~Pvi~~~~  282 (364)
T 1f0k_A          212 SVTIWHQSGK-GS-QQSVEQAYAEAGQ--PQHKVTEFI--DDMAAAYAWADVVVCRS---GALTVSEIAAAGLPALFVPF  282 (364)
T ss_dssp             GEEEEEECCT-TC-HHHHHHHHHHTTC--TTSEEESCC--SCHHHHHHHCSEEEECC---CHHHHHHHHHHTCCEEECCC
T ss_pred             CcEEEEEcCC-ch-HHHHHHHHhhcCC--CceEEecch--hhHHHHHHhCCEEEECC---chHHHHHHHHhCCCEEEeeC
Confidence            577 556775 44 5788888999987  479999999  66788999999999876   38999999999999999865


Q ss_pred             Cchh--hhhHHHHHHhcCCCCceec--C--HHHHHHHHHHh
Q psy15363         91 ETLA--SRVAASQLATLGCPELIAR--T--HKEYQDIAIRL  125 (130)
Q Consensus        91 ~~~~--~r~~~~~l~~~g~~~~va~--~--~~~y~~~a~~l  125 (130)
                      ....  ....+..+...|. +++.+  |  .+++.+...++
T Consensus       283 ~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~~l  322 (364)
T 1f0k_A          283 QHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLAGW  322 (364)
T ss_dssp             CCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHHTC
T ss_pred             CCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHHhc
Confidence            4221  1122334445566 54442  3  67777776666

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.34  E-value=5.3e-12  Score=101.70  Aligned_cols=119  Identities=15%  Similarity=0.055  Sum_probs=82.7

Q ss_pred             hHHHHHhhCCC----cEEEEeecC----ccc----HHHHHHHHHHc----CCC-CCCEEE-ecCCCHHHHHHhhccccEE
Q psy15363          2 SDIFVLKAVPN----SILWLLKFP----AVG----EANIQATAQAL----GLD-QHRILF-SNVAAKEEHVRRGQLADVC   63 (130)
Q Consensus         2 ~w~~il~~~P~----a~l~i~g~~----~~~----~~~l~~~~~~~----g~~-~~rv~f-~g~~~~~~~~~~~~~~Dv~   63 (130)
                      +|.+++++.|+    .+|+++|.+    ++.    ++.+++++.+.    |.. ...|+| .|.++.+++.++|+.||+|
T Consensus       276 A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~  355 (482)
T 1uqt_A          276 AYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVG  355 (482)
T ss_dssp             HHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEE
T ss_pred             HHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEE
Confidence            67888999886    679999853    122    23444444432    322 124664 6899999999999999999


Q ss_pred             EcCCC-CCCchHHHHHHhcCC-----cEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         64 LDTPL-CNGHTTSMDVLWTGT-----PVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        64 l~~~~-~~~g~~~lEAla~G~-----PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +.|+. +++|++++|||+||+     |||+........        .+. ++++.  .|.+++.+...++++++
T Consensus       356 v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~--------~l~-~g~lv~p~d~~~lA~ai~~lL~~~  420 (482)
T 1uqt_A          356 LVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN--------ELT-SALIVNPYDRDEVAAALDRALTMS  420 (482)
T ss_dssp             EECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG--------TCT-TSEEECTTCHHHHHHHHHHHHTCC
T ss_pred             EECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHH--------HhC-CeEEECCCCHHHHHHHHHHHHcCC
Confidence            88875 678999999999997     788765221111        111 44544  38899999888888764

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.24  E-value=2.4e-11  Score=98.30  Aligned_cols=117  Identities=11%  Similarity=0.003  Sum_probs=81.3

Q ss_pred             hHHHHHhhCCC---cEEEEeecC----cccHH----HHHHHHHHc----CCCCCCEEEecCCCHHHHHHhhccccEEEcC
Q psy15363          2 SDIFVLKAVPN---SILWLLKFP----AVGEA----NIQATAQAL----GLDQHRILFSNVAAKEEHVRRGQLADVCLDT   66 (130)
Q Consensus         2 ~w~~il~~~P~---a~l~i~g~~----~~~~~----~l~~~~~~~----g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~   66 (130)
                      +| +++++.|+   .+|+++|.+    ++..+    .+++++.+.    |..  +|+|+|.++.+++.++|+.||+|+.|
T Consensus       302 Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~--~V~f~g~v~~~el~aly~~ADv~vv~  378 (496)
T 3t5t_A          302 AF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD--TVRIDNDNDVNHTIACFRRADLLIFN  378 (496)
T ss_dssp             HH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCHHHHHHHHHHCSEEEEC
T ss_pred             HH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc--CEEEeCCCCHHHHHHHHHhccEEEEC
Confidence            67 88999997   458888742    12223    344444433    432  89999999999999999999999888


Q ss_pred             CC-CCCchHHHHHHhcC---CcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         67 PL-CNGHTTSMDVLWTG---TPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        67 ~~-~~~g~~~lEAla~G---~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      +. +++|++.+|||+||   .|+|...-..     .+..+   |-+.++.  .|.+++.+...++++++
T Consensus       379 SlrEGfgLv~~EamA~~~~~g~lVlSe~aG-----a~~~l---~~~allVnP~D~~~lA~AI~~aL~m~  439 (496)
T 3t5t_A          379 STVDGQNLSTFEAPLVNERDADVILSETCG-----AAEVL---GEYCRSVNPFDLVEQAEAISAALAAG  439 (496)
T ss_dssp             CSSBSCCSHHHHHHHHCSSCCEEEEETTBT-----THHHH---GGGSEEECTTBHHHHHHHHHHHHHCC
T ss_pred             cccccCChhHHHHHHhCCCCCCEEEeCCCC-----CHHHh---CCCEEEECCCCHHHHHHHHHHHHcCC
Confidence            75 67899999999996   6666653221     12223   2234443  47888888888887765

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.21  E-value=6.7e-11  Score=92.65  Aligned_cols=115  Identities=17%  Similarity=0.153  Sum_probs=79.9

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHH-cCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQA-LGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~-~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      ++.++.++.|+.++++..++++   .+++.+++ .+.. ++|+|.+++++.++..+|+.||+++.++   ||+ .+||++
T Consensus       253 A~~~l~~~~~~~~~v~~~g~~~---~~~~~l~~~~~~~-~~v~~~~~lg~~~~~~l~~~ad~vv~~S---Gg~-~~EA~a  324 (396)
T 3dzc_A          253 ALITTAEQHPECQILYPVHLNP---NVREPVNKLLKGV-SNIVLIEPQQYLPFVYLMDRAHIILTDS---GGI-QEEAPS  324 (396)
T ss_dssp             HHHHHHHHCTTEEEEEECCBCH---HHHHHHHHHTTTC-TTEEEECCCCHHHHHHHHHHCSEEEESC---SGG-GTTGGG
T ss_pred             HHHHHHHhCCCceEEEEeCCCh---HHHHHHHHHHcCC-CCEEEeCCCCHHHHHHHHHhcCEEEECC---ccH-HHHHHH
Confidence            4667777889999888643222   23443333 3444 7999999999889999999999998665   344 499999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      +|+|+|+++...  +|  ..++ ..|..-++..|.+++.+...+|++|+
T Consensus       325 ~G~PvV~~~~~~--~~--~e~v-~~G~~~lv~~d~~~l~~ai~~ll~d~  368 (396)
T 3dzc_A          325 LGKPVLVMRETT--ER--PEAV-AAGTVKLVGTNQQQICDALSLLLTDP  368 (396)
T ss_dssp             GTCCEEECCSSC--SC--HHHH-HHTSEEECTTCHHHHHHHHHHHHHCH
T ss_pred             cCCCEEEccCCC--cc--hHHH-HcCceEEcCCCHHHHHHHHHHHHcCH
Confidence            999999974221  11  1222 23543344457899999988888775

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.20  E-value=7.1e-11  Score=92.85  Aligned_cols=114  Identities=15%  Similarity=0.134  Sum_probs=79.8

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHH-cCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQA-LGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~-~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla   80 (130)
                      ++.++.++.|+.++++.+++++   .+++.+++ .+.. ++|+|++++++.++..+|+.||+++..+   ||. .+||++
T Consensus       247 a~~~l~~~~~~~~~v~~~~~~~---~~~~~l~~~~~~~-~~v~l~~~l~~~~~~~l~~~ad~vv~~S---Gg~-~~EA~a  318 (403)
T 3ot5_A          247 AVREIVESREDTELVYPMHLNP---AVREKAMAILGGH-ERIHLIEPLDAIDFHNFLRKSYLVFTDS---GGV-QEEAPG  318 (403)
T ss_dssp             HHHHHHHHCTTEEEEEECCSCH---HHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHHEEEEEECC---HHH-HHHGGG
T ss_pred             HHHHHHHhCCCceEEEecCCCH---HHHHHHHHHhCCC-CCEEEeCCCCHHHHHHHHHhcCEEEECC---ccH-HHHHHH
Confidence            4566777889999888754332   23444443 3544 7999999999999999999999998554   444 499999


Q ss_pred             cCCcEEecCC-CchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCC
Q psy15363         81 TGTPVVTLPG-ETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        81 ~G~PvV~~~g-~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~  129 (130)
                      +|+|+|+.+. .....     .+ ..|..-++..|.++..+...++++|+
T Consensus       319 ~g~PvV~~~~~~~~~e-----~v-~~g~~~lv~~d~~~l~~ai~~ll~~~  362 (403)
T 3ot5_A          319 MGVPVLVLRDTTERPE-----GI-EAGTLKLIGTNKENLIKEALDLLDNK  362 (403)
T ss_dssp             TTCCEEECCSSCSCHH-----HH-HHTSEEECCSCHHHHHHHHHHHHHCH
T ss_pred             hCCCEEEecCCCcchh-----he-eCCcEEEcCCCHHHHHHHHHHHHcCH
Confidence            9999999842 21211     22 23533344458999999888888775

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.01  E-value=9.2e-10  Score=84.57  Aligned_cols=111  Identities=14%  Similarity=0.120  Sum_probs=78.1

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGT   83 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~   83 (130)
                      .+. ++.|+.+++++++ +...+.++      ++. ++|+|.++++..+   ++..||+++.   .+|++|++|||++|+
T Consensus       243 ~~~-~~~p~~~~v~~~~-~~~~~~l~------~~~-~~v~~~~~~~~~~---ll~~ad~~v~---~~G~~t~~Ea~~~G~  307 (391)
T 3tsa_A          243 AAA-TELPGVEAVIAVP-PEHRALLT------DLP-DNARIAESVPLNL---FLRTCELVIC---AGGSGTAFTATRLGI  307 (391)
T ss_dssp             HHH-HTSTTEEEEEECC-GGGGGGCT------TCC-TTEEECCSCCGGG---TGGGCSEEEE---CCCHHHHHHHHHTTC
T ss_pred             HHh-ccCCCeEEEEEEC-Ccchhhcc------cCC-CCEEEeccCCHHH---HHhhCCEEEe---CCCHHHHHHHHHhCC
Confidence            344 5678889888875 33322221      343 8999999998654   4589999992   345579999999999


Q ss_pred             cEEecCCCchhhhhHHHHHHhcCCCCceec-----CHHHHHHHHHHhccCCC
Q psy15363         84 PVVTLPGETLASRVAASQLATLGCPELIAR-----THKEYQDIAIRLGTDRD  130 (130)
Q Consensus        84 PvV~~~g~~~~~r~~~~~l~~~g~~~~va~-----~~~~y~~~a~~l~~d~e  130 (130)
                      |+|+.+-.. .....+..+...|....+..     +.+++.+...++++|++
T Consensus       308 P~v~~p~~~-~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~  358 (391)
T 3tsa_A          308 PQLVLPQYF-DQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTG  358 (391)
T ss_dssp             CEEECCCST-THHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH
T ss_pred             CEEecCCcc-cHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHH
Confidence            999985421 22334556667777665554     68899999999998863

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=98.98  E-value=5.3e-09  Score=72.14  Aligned_cols=85  Identities=9%  Similarity=0.128  Sum_probs=63.0

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|+|.++++..+++. +..||+++.   .+|++|++|||++|+|+|+.+-... ....+..+...|..-++..   +.+
T Consensus        68 ~~v~~~~~~~~~~~l~-~~~ad~~I~---~~G~~t~~Ea~~~G~P~i~~p~~~~-Q~~na~~l~~~g~g~~~~~~~~~~~  142 (170)
T 2o6l_A           68 LNTRLYKWIPQNDLLG-HPKTRAFIT---HGGANGIYEAIYHGIPMVGIPLFAD-QPDNIAHMKARGAAVRVDFNTMSST  142 (170)
T ss_dssp             TTEEEESSCCHHHHHT-STTEEEEEE---CCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHTTTSEEECCTTTCCHH
T ss_pred             CcEEEecCCCHHHHhc-CCCcCEEEE---cCCccHHHHHHHcCCCEEeccchhh-HHHHHHHHHHcCCeEEeccccCCHH
Confidence            6899999999876654 389999994   3677999999999999999975322 2333556666676544432   778


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...++++|+
T Consensus       143 ~l~~~i~~ll~~~  155 (170)
T 2o6l_A          143 DLLNALKRVINDP  155 (170)
T ss_dssp             HHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHcCH
Confidence            8888888888765

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=98.96  E-value=1.8e-09  Score=83.20  Aligned_cols=83  Identities=17%  Similarity=0.220  Sum_probs=62.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|.|.|+++   +..+|..||+|+.+   +|+++++|||++|+|+|+.+... .....+..+...|...++..   |.+
T Consensus       292 ~~v~~~~~~~---~~~~l~~ad~~v~~---~g~~t~~Ea~a~G~P~v~~p~~~-~q~~~~~~v~~~g~g~~~~~~~~~~~  364 (412)
T 3otg_A          292 ANVRLESWVP---QAALLPHVDLVVHH---GGSGTTLGALGAGVPQLSFPWAG-DSFANAQAVAQAGAGDHLLPDNISPD  364 (412)
T ss_dssp             TTEEEESCCC---HHHHGGGCSEEEES---CCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHHTSEEECCGGGCCHH
T ss_pred             CcEEEeCCCC---HHHHHhcCcEEEEC---CchHHHHHHHHhCCCEEecCCch-hHHHHHHHHHHcCCEEecCcccCCHH
Confidence            7999999995   55678899999943   34589999999999999986432 12233455666676655554   788


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...+|++|+
T Consensus       365 ~l~~ai~~ll~~~  377 (412)
T 3otg_A          365 SVSGAAKRLLAEE  377 (412)
T ss_dssp             HHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHhCH
Confidence            9999999998875

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=98.95  E-value=2.6e-09  Score=82.52  Aligned_cols=98  Identities=13%  Similarity=-0.027  Sum_probs=72.2

Q ss_pred             CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC--------CCCchHHHHHHhc
Q psy15363         10 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL--------CNGHTTSMDVLWT   81 (130)
Q Consensus        10 ~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--------~~~g~~~lEAla~   81 (130)
                      .|+.+|+++|+ |+.+          .+  ++|+|+|++|++++..+++.+|+.|-...        ++.+..++|+|||
T Consensus       197 ~~~~~f~ivG~-G~~~----------~l--~nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~  263 (339)
T 3rhz_A          197 KYDIPLKVYTW-QNVE----------LP--QNVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAA  263 (339)
T ss_dssp             CCSSCEEEEES-CCCC----------CC--TTEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHH
T ss_pred             CCCCeEEEEeC-Cccc----------Cc--CCEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHc
Confidence            38899999997 4543          23  39999999999999999988888875411        2457899999999


Q ss_pred             CCcEEecCCCchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhc
Q psy15363         82 GTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLG  126 (130)
Q Consensus        82 G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~  126 (130)
                      |+|||+........     ++...++ +++.++.+++.+....+.
T Consensus       264 G~PVI~~~~~~~~~-----~v~~~~~-G~~~~~~~e~~~~i~~l~  302 (339)
T 3rhz_A          264 GIPVIVQEGIANQE-----LIENNGL-GWIVKDVEEAIMKVKNVN  302 (339)
T ss_dssp             TCCEEEETTCTTTH-----HHHHHTC-EEEESSHHHHHHHHHHCC
T ss_pred             CCCEEEccChhHHH-----HHHhCCe-EEEeCCHHHHHHHHHHhC
Confidence            99999987553322     3333333 566778888887776653

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=98.88  E-value=1.1e-08  Score=78.83  Aligned_cols=103  Identities=17%  Similarity=0.136  Sum_probs=66.2

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCC
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~   91 (130)
                      +.+++++++ +...+.++      .+. ++|+|.++++..+   ++..||+|+.   .+|++|++|||++|+|+|+.+..
T Consensus       264 ~~~~v~~~~-~~~~~~l~------~~~-~~v~~~~~~~~~~---ll~~ad~~v~---~gG~~t~~Ea~~~G~P~v~~p~~  329 (398)
T 4fzr_A          264 GFEVVVAVS-DKLAQTLQ------PLP-EGVLAAGQFPLSA---IMPACDVVVH---HGGHGTTLTCLSEGVPQVSVPVI  329 (398)
T ss_dssp             TCEEEECCC-C--------------CC-TTEEEESCCCHHH---HGGGCSEEEE---CCCHHHHHHHHHTTCCEEECCCS
T ss_pred             CCEEEEEeC-Ccchhhhc------cCC-CcEEEeCcCCHHH---HHhhCCEEEe---cCCHHHHHHHHHhCCCEEecCCc
Confidence            467777774 33333322      233 8999999997544   5667999992   45568999999999999998642


Q ss_pred             chhhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhccCC
Q psy15363         92 TLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR  129 (130)
Q Consensus        92 ~~~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~d~  129 (130)
                      . .....+..+...|..-.+..   +.+++.+...++++|+
T Consensus       330 ~-~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~  369 (398)
T 4fzr_A          330 A-EVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDS  369 (398)
T ss_dssp             G-GGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCT
T ss_pred             h-hHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCH
Confidence            1 22234556666677655543   6677888888888876

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=98.86  E-value=9.4e-09  Score=79.94  Aligned_cols=108  Identities=21%  Similarity=0.209  Sum_probs=70.9

Q ss_pred             HhhCCCcEE-EEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcE
Q psy15363          7 LKAVPNSIL-WLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPV   85 (130)
Q Consensus         7 l~~~P~a~l-~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~Pv   85 (130)
                      +++.|+.++ +++|. ++..+.++      .+. ++|.|.|+++..   .+|+.||+|+..   +|.++++|||++|+|+
T Consensus       257 l~~~~~~~~~~~~G~-~~~~~~l~------~~~-~~v~~~~~~~~~---~~l~~ad~~v~~---~G~~t~~Ea~~~G~P~  322 (430)
T 2iyf_A          257 FGNLPGWHLVLQIGR-KVTPAELG------ELP-DNVEVHDWVPQL---AILRQADLFVTH---AGAGGSQEGLATATPM  322 (430)
T ss_dssp             HTTCTTEEEEEECC----CGGGGC------SCC-TTEEEESSCCHH---HHHTTCSEEEEC---CCHHHHHHHHHTTCCE
T ss_pred             HhcCCCeEEEEEeCC-CCChHHhc------cCC-CCeEEEecCCHH---HHhhccCEEEEC---CCccHHHHHHHhCCCE
Confidence            344466676 45664 33332221      243 899999999865   568899999842   3558999999999999


Q ss_pred             EecCCCchhhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhccCC
Q psy15363         86 VTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR  129 (130)
Q Consensus        86 V~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~d~  129 (130)
                      |+.+-... ....+..+...|..-.+..   +.+++.+...++++|+
T Consensus       323 i~~p~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~  368 (430)
T 2iyf_A          323 IAVPQAVD-QFGNADMLQGLGVARKLATEEATADLLRETALALVDDP  368 (430)
T ss_dssp             EECCCSHH-HHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCH
T ss_pred             EECCCccc-hHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCH
Confidence            99865321 2223445555666444432   7788888888888775

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=98.81  E-value=3.8e-08  Score=77.02  Aligned_cols=112  Identities=12%  Similarity=0.123  Sum_probs=77.0

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHc-C-CC-CCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQAL-G-LD-QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL   79 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~-g-~~-~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl   79 (130)
                      +.++.++. +..+++..+     +.+++.+++. | +. .++|.|.+++++.++..+|+.||+++..+   || ...||+
T Consensus       229 l~~l~~~~-~~~vv~p~~-----p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S---Gg-v~~EA~  298 (385)
T 4hwg_A          229 LQMLIKEY-NFLIIFSTH-----PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS---GT-ITEEAS  298 (385)
T ss_dssp             HHHHHHHH-CCEEEEEEC-----HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC---TT-HHHHHH
T ss_pred             HHHHHhcC-CeEEEEECC-----hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC---cc-HHHHHH
Confidence            34444444 566555443     2356666665 5 32 26899999999989999999999999443   33 579999


Q ss_pred             hcCCcEEecCCCc-hhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccCCC
Q psy15363         80 WTGTPVVTLPGET-LASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        80 a~G~PvV~~~g~~-~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d~e  130 (130)
                      ++|+|+|+.+... ...     .+ ..|-.-++..|.++..+...+|++|++
T Consensus       299 alG~Pvv~~~~~ter~e-----~v-~~G~~~lv~~d~~~i~~ai~~ll~d~~  344 (385)
T 4hwg_A          299 ILNLPALNIREAHERPE-----GM-DAGTLIMSGFKAERVLQAVKTITEEHD  344 (385)
T ss_dssp             HTTCCEEECSSSCSCTH-----HH-HHTCCEECCSSHHHHHHHHHHHHTTCB
T ss_pred             HcCCCEEEcCCCccchh-----hh-hcCceEEcCCCHHHHHHHHHHHHhChH
Confidence            9999999986532 122     12 225444555689999999999998863

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=98.78  E-value=1.7e-08  Score=77.29  Aligned_cols=84  Identities=15%  Similarity=0.211  Sum_probs=62.8

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|+|.++++..   .++..||+++..   +|..|++|||++|+|+|+.+.........+..+...|....+..   +.+
T Consensus       281 ~~v~~~~~~~~~---~ll~~ad~~v~~---~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~  354 (402)
T 3ia7_A          281 PNVEAHQWIPFH---SVLAHARACLTH---GTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPA  354 (402)
T ss_dssp             TTEEEESCCCHH---HHHTTEEEEEEC---CCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHH
T ss_pred             CcEEEecCCCHH---HHHhhCCEEEEC---CCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHH
Confidence            799999999875   567889999832   34578899999999999886411223345666777787665554   788


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...+|++|+
T Consensus       355 ~l~~~~~~ll~~~  367 (402)
T 3ia7_A          355 SIREAVERLAADS  367 (402)
T ss_dssp             HHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHcCH
Confidence            8988888888875

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=98.69  E-value=1.6e-07  Score=72.49  Aligned_cols=117  Identities=13%  Similarity=0.077  Sum_probs=78.1

Q ss_pred             HHHhhCC---CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhc
Q psy15363          5 FVLKAVP---NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT   81 (130)
Q Consensus         5 ~il~~~P---~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~   81 (130)
                      +.+++.|   +..++.+++ ....+.+++..++.+.   ++.+.+++  +++..+|+.||+++..   +|++|+.|++++
T Consensus       201 ~al~~l~~~~~~~vi~~~G-~~~~~~~~~~~~~~~~---~~~v~~f~--~dm~~~l~~aDlvI~r---aG~~Tv~E~~a~  271 (365)
T 3s2u_A          201 EALAQVPLEIRPAIRHQAG-RQHAEITAERYRTVAV---EADVAPFI--SDMAAAYAWADLVICR---AGALTVSELTAA  271 (365)
T ss_dssp             HHHHTSCTTTCCEEEEECC-TTTHHHHHHHHHHTTC---CCEEESCC--SCHHHHHHHCSEEEEC---CCHHHHHHHHHH
T ss_pred             HHHHhcccccceEEEEecC-ccccccccceeccccc---ccccccch--hhhhhhhccceEEEec---CCcchHHHHHHh
Confidence            4444444   234444432 2345566666677664   56777888  4577789999999932   468899999999


Q ss_pred             CCcEEecCCCch---hhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhccCCC
Q psy15363         82 GTPVVTLPGETL---ASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDRD  130 (130)
Q Consensus        82 G~PvV~~~g~~~---~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~d~e  130 (130)
                      |+|+|..+-...   .+..-+..+...|...++.+   +.+++.+...+|++||+
T Consensus       272 G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~  326 (365)
T 3s2u_A          272 GLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPE  326 (365)
T ss_dssp             TCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTH
T ss_pred             CCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHH
Confidence            999987753321   23344667777787666653   57889999999999874

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=98.68  E-value=8.5e-08  Score=74.08  Aligned_cols=83  Identities=18%  Similarity=0.274  Sum_probs=61.6

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|+|.++++..   .++..||+++..   +|..|++||+++|+|+|+.+-. ......+..+...|....+..   +.+
T Consensus       297 ~~v~~~~~~~~~---~ll~~ad~~v~~---~G~~t~~Ea~~~G~P~v~~p~~-~~q~~~a~~l~~~g~g~~~~~~~~~~~  369 (415)
T 3rsc_A          297 PNVEAHRWVPHV---KVLEQATVCVTH---GGMGTLMEALYWGRPLVVVPQS-FDVQPMARRVDQLGLGAVLPGEKADGD  369 (415)
T ss_dssp             TTEEEESCCCHH---HHHHHEEEEEES---CCHHHHHHHHHTTCCEEECCCS-GGGHHHHHHHHHHTCEEECCGGGCCHH
T ss_pred             CcEEEEecCCHH---HHHhhCCEEEEC---CcHHHHHHHHHhCCCEEEeCCc-chHHHHHHHHHHcCCEEEcccCCCCHH
Confidence            789999999865   456789999832   3457899999999999998642 223334556666677665543   788


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...++++|+
T Consensus       370 ~l~~~i~~ll~~~  382 (415)
T 3rsc_A          370 TLLAAVGAVAADP  382 (415)
T ss_dssp             HHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHcCH
Confidence            8888888888875

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=98.66  E-value=8.8e-08  Score=73.39  Aligned_cols=102  Identities=13%  Similarity=0.150  Sum_probs=67.4

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCC
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~   91 (130)
                      +.+++++++ +...+.++    .  +. ++|.| |+++..+   +|..||+|+..   +|++|++|||++|+|+|+.+-.
T Consensus       244 ~~~~~~~~g-~~~~~~l~----~--~~-~~v~~-~~~~~~~---~l~~~d~~v~~---~G~~t~~Ea~~~G~P~v~~p~~  308 (384)
T 2p6p_A          244 DVELIVAAP-DTVAEALR----A--EV-PQARV-GWTPLDV---VAPTCDLLVHH---AGGVSTLTGLSAGVPQLLIPKG  308 (384)
T ss_dssp             TCEEEEECC-HHHHHHHH----H--HC-TTSEE-ECCCHHH---HGGGCSEEEEC---SCTTHHHHHHHTTCCEEECCCS
T ss_pred             CcEEEEEeC-CCCHHhhC----C--CC-CceEE-cCCCHHH---HHhhCCEEEeC---CcHHHHHHHHHhCCCEEEccCc
Confidence            567766553 22222222    2  33 79999 9998654   56899999953   4567999999999999999753


Q ss_pred             chhhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhccCC
Q psy15363         92 TLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR  129 (130)
Q Consensus        92 ~~~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~d~  129 (130)
                      .. ....+..+...|..-.+..   +.+++.+...++++|+
T Consensus       309 ~d-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~  348 (384)
T 2p6p_A          309 SV-LEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKD  348 (384)
T ss_dssp             HH-HHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH
T ss_pred             cc-chHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH
Confidence            21 1233444555566544432   6788888888887775

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=98.59  E-value=4.4e-08  Score=81.97  Aligned_cols=67  Identities=10%  Similarity=0.014  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHcCCCCCC------EEEe-cCCCHH------HHHHhhccccEEEcCCC-CCCchHHHHHHhcCCcEEecCC
Q psy15363         25 EANIQATAQALGLDQHR------ILFS-NVAAKE------EHVRRGQLADVCLDTPL-CNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        25 ~~~l~~~~~~~g~~~~r------v~f~-g~~~~~------~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      .+.+...++++++. ++      |+|. ++++..      ++..+|+.||+|+.|+. +++|++.+|||+||+|||+++.
T Consensus       472 ~D~Il~~~r~l~L~-N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~  550 (725)
T 3nb0_A          472 NDLILNKIRQVQLF-NSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNV  550 (725)
T ss_dssp             GCHHHHHHHHHTCC-CCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred             ccHHHHHHHhcCCC-CCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence            34677778888886 55      5665 556654      58889999999999885 5689999999999999999875


Q ss_pred             Cc
Q psy15363         91 ET   92 (130)
Q Consensus        91 ~~   92 (130)
                      ..
T Consensus       551 gG  552 (725)
T 3nb0_A          551 SG  552 (725)
T ss_dssp             BH
T ss_pred             CC
Confidence            53

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=98.53  E-value=2.4e-07  Score=72.57  Aligned_cols=83  Identities=14%  Similarity=0.117  Sum_probs=61.0

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|++.++++..+   +|..||+++.   .+|.+|++|||++|+|+|+.+-... ....+..+...|..-.+..   +.+
T Consensus       319 ~~v~~~~~~~~~~---ll~~ad~~V~---~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~  391 (441)
T 2yjn_A          319 DNVRTVGFVPMHA---LLPTCAATVH---HGGPGSWHTAAIHGVPQVILPDGWD-TGVRAQRTQEFGAGIALPVPELTPD  391 (441)
T ss_dssp             SSEEECCSCCHHH---HGGGCSEEEE---CCCHHHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHHTSEEECCTTTCCHH
T ss_pred             CCEEEecCCCHHH---HHhhCCEEEE---CCCHHHHHHHHHhCCCEEEeCCccc-HHHHHHHHHHcCCEEEcccccCCHH
Confidence            7999999998754   4789999994   3566899999999999999976322 2233455556676555542   678


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...++++|+
T Consensus       392 ~l~~~i~~ll~~~  404 (441)
T 2yjn_A          392 QLRESVKRVLDDP  404 (441)
T ss_dssp             HHHHHHHHHHHCH
T ss_pred             HHHHHHHHHhcCH
Confidence            8888888887765

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=98.45  E-value=7.1e-07  Score=69.31  Aligned_cols=83  Identities=17%  Similarity=0.259  Sum_probs=61.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|.+.++++..   .+|..||+|+.   .+|.+|++||+++|+|+|+.+-... ....+..+...|..-.+..   +.+
T Consensus       305 ~~v~~~~~~~~~---~~l~~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~  377 (424)
T 2iya_A          305 PNVEVHQWVPQL---DILTKASAFIT---HAGMGSTMEALSNAVPMVAVPQIAE-QTMNAERIVELGLGRHIPRDQVTAE  377 (424)
T ss_dssp             TTEEEESSCCHH---HHHTTCSEEEE---CCCHHHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHTTSEEECCGGGCCHH
T ss_pred             CCeEEecCCCHH---HHHhhCCEEEE---CCchhHHHHHHHcCCCEEEecCccc-hHHHHHHHHHCCCEEEcCcCCCCHH
Confidence            789999999865   46789999984   3456899999999999999976422 2334555666676544442   778


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...++++|+
T Consensus       378 ~l~~~i~~ll~~~  390 (424)
T 2iya_A          378 KLREAVLAVASDP  390 (424)
T ss_dssp             HHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHcCH
Confidence            8888888887765

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=98.44  E-value=1.1e-07  Score=73.33  Aligned_cols=65  Identities=12%  Similarity=0.082  Sum_probs=45.7

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      +.++++++++ ...+.++      ++. ++|+|.|+++..++   +..||+|+.   .+|++|++|||++|+|+|+.+-
T Consensus       263 ~~~~v~~~g~-~~~~~l~------~~~-~~v~~~~~~~~~~l---l~~ad~~v~---~~G~~t~~Eal~~G~P~v~~p~  327 (398)
T 3oti_A          263 DADFVLALGD-LDISPLG------TLP-RNVRAVGWTPLHTL---LRTCTAVVH---HGGGGTVMTAIDAGIPQLLAPD  327 (398)
T ss_dssp             SSEEEEECTT-SCCGGGC------SCC-TTEEEESSCCHHHH---HTTCSEEEE---CCCHHHHHHHHHHTCCEEECCC
T ss_pred             CCEEEEEECC-cChhhhc------cCC-CcEEEEccCCHHHH---HhhCCEEEE---CCCHHHHHHHHHhCCCEEEcCC
Confidence            4666666642 3222221      343 89999999986654   567999992   3566899999999999999753

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=98.32  E-value=2.1e-06  Score=66.66  Aligned_cols=82  Identities=13%  Similarity=0.053  Sum_probs=58.0

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|.+.+++|..++   +..||+|+.   .+|.+|++||+++|+|+|+.+-..- ....+..+...|..-.+..   +.+
T Consensus       285 ~~v~~~~~~~~~~~---l~~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~  357 (415)
T 1iir_A          285 ADCFAIGEVNHQVL---FGRVAAVIH---HGGAGTTHVAARAGAPQILLPQMAD-QPYYAGRVAELGVGVAHDGPIPTFD  357 (415)
T ss_dssp             GGEEECSSCCHHHH---GGGSSEEEE---CCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHHTSEEECSSSSCCHH
T ss_pred             CCEEEeCcCChHHH---HhhCCEEEe---CCChhHHHHHHHcCCCEEECCCCCc-cHHHHHHHHHCCCcccCCcCCCCHH
Confidence            57899999987554   689999994   3456799999999999999875321 2233445556666544432   677


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...++ +|+
T Consensus       358 ~l~~~i~~l-~~~  369 (415)
T 1iir_A          358 SLSAALATA-LTP  369 (415)
T ss_dssp             HHHHHHHHH-TSH
T ss_pred             HHHHHHHHH-cCH
Confidence            787777777 654

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=98.20  E-value=4.2e-06  Score=64.92  Aligned_cols=82  Identities=12%  Similarity=0.060  Sum_probs=57.7

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee---cCHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTHK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va---~~~~  116 (130)
                      +++.+.+++|..+   ++..||+|+.   .+|.+|++||+++|+|+|+.+-... ...-+..+...|..-.+.   .+.+
T Consensus       286 ~~v~~~~~~~~~~---ll~~~d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~  358 (416)
T 1rrv_A          286 DDCFAIDEVNFQA---LFRRVAAVIH---HGSAGTEHVATRAGVPQLVIPRNTD-QPYFAGRVAALGIGVAHDGPTPTFE  358 (416)
T ss_dssp             TTEEEESSCCHHH---HGGGSSEEEE---CCCHHHHHHHHHHTCCEEECCCSBT-HHHHHHHHHHHTSEEECSSSCCCHH
T ss_pred             CCEEEeccCChHH---HhccCCEEEe---cCChhHHHHHHHcCCCEEEccCCCC-cHHHHHHHHHCCCccCCCCCCCCHH
Confidence            5789999998654   4689999994   4566799999999999999875322 223344555556654443   2677


Q ss_pred             HHHHHHHHhccCC
Q psy15363        117 EYQDIAIRLGTDR  129 (130)
Q Consensus       117 ~y~~~a~~l~~d~  129 (130)
                      ++.+...++ +|+
T Consensus       359 ~l~~~i~~l-~~~  370 (416)
T 1rrv_A          359 SLSAALTTV-LAP  370 (416)
T ss_dssp             HHHHHHHHH-TSH
T ss_pred             HHHHHHHHh-hCH
Confidence            777777777 654

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=97.91  E-value=0.00011  Score=55.24  Aligned_cols=85  Identities=12%  Similarity=-0.043  Sum_probs=58.3

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCch
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL   93 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~   93 (130)
                      ..++.|.+.+..+.+++..++.    .++.+.+++  +++..+|+.||+.+.    .+|+|+.|++++|+|.|..+-...
T Consensus       186 i~vv~G~~~~~~~~l~~~~~~~----~~v~v~~~~--~~m~~~m~~aDlvI~----~gG~T~~E~~~~g~P~i~ip~~~~  255 (282)
T 3hbm_A          186 ISIATSSSNPNLKKLQKFAKLH----NNIRLFIDH--ENIAKLMNESNKLII----SASSLVNEALLLKANFKAICYVKN  255 (282)
T ss_dssp             EEEEECTTCTTHHHHHHHHHTC----SSEEEEESC--SCHHHHHHTEEEEEE----ESSHHHHHHHHTTCCEEEECCSGG
T ss_pred             EEEEECCCchHHHHHHHHHhhC----CCEEEEeCH--HHHHHHHHHCCEEEE----CCcHHHHHHHHcCCCEEEEeCCCC
Confidence            3445564334456677665542    478888888  457778899999995    356899999999999998764333


Q ss_pred             hhhhHHHHHHhcCCCC
Q psy15363         94 ASRVAASQLATLGCPE  109 (130)
Q Consensus        94 ~~r~~~~~l~~~g~~~  109 (130)
                       .+.-+..+...|...
T Consensus       256 -Q~~nA~~l~~~G~~~  270 (282)
T 3hbm_A          256 -QESTATWLAKKGYEV  270 (282)
T ss_dssp             -GHHHHHHHHHTTCEE
T ss_pred             -HHHHHHHHHHCCCEE
Confidence             234556666666643

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=97.90  E-value=1.2e-05  Score=61.54  Aligned_cols=63  Identities=16%  Similarity=0.193  Sum_probs=43.7

Q ss_pred             CCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCC
Q psy15363         39 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCP  108 (130)
Q Consensus        39 ~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~  108 (130)
                      ++++.+.+++|..++   +..+|+|+.   .+|.+|++||+++|+|+|+.+-..- ....+..+...|..
T Consensus       287 ~~~v~~~~~~p~~~l---L~~~~~~v~---h~G~~s~~Eal~~GvP~v~~P~~~d-Q~~na~~v~~~G~g  349 (400)
T 4amg_A          287 PANVRVVEWIPLGAL---LETCDAIIH---HGGSGTLLTALAAGVPQCVIPHGSY-QDTNRDVLTGLGIG  349 (400)
T ss_dssp             CTTEEEECCCCHHHH---HTTCSEEEE---CCCHHHHHHHHHHTCCEEECCC----CHHHHHHHHHHTSE
T ss_pred             CCCEEEEeecCHHHH---hhhhhheec---cCCccHHHHHHHhCCCEEEecCccc-HHHHHHHHHHCCCE
Confidence            378999999997654   568999882   4567899999999999999864221 12223444455654

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=97.81  E-value=5.4e-05  Score=58.70  Aligned_cols=81  Identities=17%  Similarity=0.108  Sum_probs=55.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCceec---CHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~  116 (130)
                      ++|++.+++|..+   ++..||+++.   .+|..|+.||+++|+|+|..+-..- ....+..+...|....+..   +.+
T Consensus       268 ~~v~~~~~~~~~~---ll~~~d~~v~---~gG~~t~~Eal~~GvP~v~~p~~~d-Q~~na~~~~~~G~g~~l~~~~~~~~  340 (404)
T 3h4t_A          268 DDCLVVGEVNHQV---LFGRVAAVVH---HGGAGTTTAVTRAGAPQVVVPQKAD-QPYYAGRVADLGVGVAHDGPTPTVE  340 (404)
T ss_dssp             TTEEEESSCCHHH---HGGGSSEEEE---CCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHHTSEEECSSSSCCHH
T ss_pred             CCEEEecCCCHHH---HHhhCcEEEE---CCcHHHHHHHHHcCCCEEEcCCccc-HHHHHHHHHHCCCEeccCcCCCCHH
Confidence            6899999998755   4568999982   3345799999999999999864221 2233445556676544432   667


Q ss_pred             HHHHHHHHhcc
Q psy15363        117 EYQDIAIRLGT  127 (130)
Q Consensus       117 ~y~~~a~~l~~  127 (130)
                      ++.+...++++
T Consensus       341 ~l~~ai~~ll~  351 (404)
T 3h4t_A          341 SLSAALATALT  351 (404)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHhC
Confidence            77766666654

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=97.37  E-value=0.00013  Score=54.98  Aligned_cols=86  Identities=12%  Similarity=-0.021  Sum_probs=55.7

Q ss_pred             HHHHHhhCC--CcEEEEeecCcccHHHHHHHHHHcC--CCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHH
Q psy15363          3 DIFVLKAVP--NSILWLLKFPAVGEANIQATAQALG--LDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDV   78 (130)
Q Consensus         3 w~~il~~~P--~a~l~i~g~~~~~~~~l~~~~~~~g--~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEA   78 (130)
                      |.++.+...  +.++++.|. +.+++..++..+..+  ....-+.+.|..+..++.++++.||+++..  . +|..-+ |
T Consensus       202 ~~~l~~~L~~~~~~vvl~g~-~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~--D-sg~~Hl-A  276 (348)
T 1psw_A          202 YAELAKQLIDEGYQVVLFGS-AKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTN--D-SGLMHV-A  276 (348)
T ss_dssp             HHHHHHHHHHTTCEEEECCC-GGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEE--S-SHHHHH-H
T ss_pred             HHHHHHHHHHCCCeEEEEeC-hhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEec--C-CHHHHH-H
Confidence            455543321  678888885 345554444443322  111234678888999999999999999842  2 344445 8


Q ss_pred             HhcCCcEEecCCCch
Q psy15363         79 LWTGTPVVTLPGETL   93 (130)
Q Consensus        79 la~G~PvV~~~g~~~   93 (130)
                      .++|+|+|+.-|...
T Consensus       277 aa~g~P~v~lfg~t~  291 (348)
T 1psw_A          277 AALNRPLVALYGPSS  291 (348)
T ss_dssp             HHTTCCEEEEESSSC
T ss_pred             HHcCCCEEEEECCCC
Confidence            899999999866543

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=97.30  E-value=0.0009  Score=53.23  Aligned_cols=83  Identities=11%  Similarity=0.073  Sum_probs=53.7

Q ss_pred             CCEEEecCCCHHHHHHhhcc--ccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHH-HhcCCCCcee--cC
Q psy15363         40 HRILFSNVAAKEEHVRRGQL--ADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL-ATLGCPELIA--RT  114 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~--~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l-~~~g~~~~va--~~  114 (130)
                      +|+.+.+++|..+   ++..  +|+|+   ..+|.+|++||+++|+|+|+.+-..- ...-+..+ ...|..-.+.  -+
T Consensus       353 ~~~~v~~~~pq~~---~L~h~~~~~~v---th~G~~s~~Eal~~GvP~i~~P~~~d-Q~~na~~~~~~~G~g~~l~~~~~  425 (482)
T 2pq6_A          353 DRGLIASWCPQDK---VLNHPSIGGFL---THCGWNSTTESICAGVPMLCWPFFAD-QPTDCRFICNEWEIGMEIDTNVK  425 (482)
T ss_dssp             TTEEEESCCCHHH---HHTSTTEEEEE---ECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHTSCCEEECCSSCC
T ss_pred             CCEEEEeecCHHH---HhcCCCCCEEE---ecCCcchHHHHHHcCCCEEecCcccc-hHHHHHHHHHHhCEEEEECCCCC
Confidence            5777788887654   4544  45576   24677899999999999999975322 23344445 3567765443  25


Q ss_pred             HHHHHHHHHHhccCC
Q psy15363        115 HKEYQDIAIRLGTDR  129 (130)
Q Consensus       115 ~~~y~~~a~~l~~d~  129 (130)
                      .++..+...++.+|+
T Consensus       426 ~~~l~~~i~~ll~~~  440 (482)
T 2pq6_A          426 REELAKLINEVIAGD  440 (482)
T ss_dssp             HHHHHHHHHHHHTSH
T ss_pred             HHHHHHHHHHHHcCC
Confidence            566666666666554

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=97.29  E-value=0.00058  Score=52.34  Aligned_cols=79  Identities=9%  Similarity=0.026  Sum_probs=56.7

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCC
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE   91 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~   91 (130)
                      +.++++.|+ +.+++..++..+..+  ..-+.+.|..+-.++.++++.||+++..  . .|.+-+ |.++|+|+|++-|.
T Consensus       217 g~~vvl~g~-~~e~~~~~~i~~~~~--~~~~~l~g~~sl~e~~ali~~a~~~i~~--D-sG~~Hl-Aaa~g~P~v~lfg~  289 (349)
T 3tov_A          217 GYKTVFFGG-PMDLEMVQPVVEQME--TKPIVATGKFQLGPLAAAMNRCNLLITN--D-SGPMHV-GISQGVPIVALYGP  289 (349)
T ss_dssp             TCEEEECCC-TTTHHHHHHHHHTCS--SCCEECTTCCCHHHHHHHHHTCSEEEEE--S-SHHHHH-HHTTTCCEEEECSS
T ss_pred             CCeEEEEeC-cchHHHHHHHHHhcc--cccEEeeCCCCHHHHHHHHHhCCEEEEC--C-CCHHHH-HHhcCCCEEEEECC
Confidence            567778885 355666666666544  2457788999989999999999999831  2 455555 88999999999776


Q ss_pred             chhhhh
Q psy15363         92 TLASRV   97 (130)
Q Consensus        92 ~~~~r~   97 (130)
                      ....++
T Consensus       290 t~p~~~  295 (349)
T 3tov_A          290 SNPFFY  295 (349)
T ss_dssp             CCHHHH
T ss_pred             CCcccc
Confidence            544443

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=97.23  E-value=0.00087  Score=53.16  Aligned_cols=82  Identities=11%  Similarity=0.009  Sum_probs=54.7

Q ss_pred             CCEEEecCCCHHHHHHhhc--cccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhc-CCCCcee---c
Q psy15363         40 HRILFSNVAAKEEHVRRGQ--LADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATL-GCPELIA---R  113 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~--~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~-g~~~~va---~  113 (130)
                      +|+.+.+++|..+   ++.  .+|+|+.   .+|.+|++||+++|+|+|+.+-..- ...-+..+... |..-.+.   -
T Consensus       325 ~~~~v~~w~pq~~---vL~h~~~~~fvt---h~G~~S~~Eal~~GvP~i~~P~~~d-Q~~Na~~l~~~~g~g~~l~~~~~  397 (456)
T 2c1x_A          325 GYGMVVPWAPQAE---VLAHEAVGAFVT---HCGWNSLWESVAGGVPLICRPFFGD-QRLNGRMVEDVLEIGVRIEGGVF  397 (456)
T ss_dssp             TTEEEESCCCHHH---HHTSTTEEEEEE---CCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHTSCCEEECGGGSC
T ss_pred             CceEEecCCCHHH---HhcCCcCCEEEe---cCCcchHHHHHHhCceEEecCChhh-HHHHHHHHHHHhCeEEEecCCCc
Confidence            4688888888654   355  7889882   4677899999999999999975322 23345556555 7664443   1


Q ss_pred             CHHHHHHHHHHhccC
Q psy15363        114 THKEYQDIAIRLGTD  128 (130)
Q Consensus       114 ~~~~y~~~a~~l~~d  128 (130)
                      +.++..+...++.+|
T Consensus       398 ~~~~l~~~i~~ll~~  412 (456)
T 2c1x_A          398 TKSGLMSCFDQILSQ  412 (456)
T ss_dssp             CHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHCC
Confidence            456666665555554

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=97.21  E-value=0.0023  Score=50.75  Aligned_cols=83  Identities=14%  Similarity=0.172  Sum_probs=54.7

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHH-HHhcCCCCcee------
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQ-LATLGCPELIA------  112 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~-l~~~g~~~~va------  112 (130)
                      +|+...+++|..+++. ...+|+|+.   .+|.+|++||+++|+|+|+.+-..-. ..-+.. +...|..-.+.      
T Consensus       332 ~~~~v~~w~pq~~vL~-h~~~~~fvt---h~G~~s~~Eal~~GvP~i~~P~~~dQ-~~Na~~lv~~~g~g~~l~~~~~~~  406 (463)
T 2acv_A          332 GKGMICGWAPQVEVLA-HKAIGGFVS---HCGWNSILESMWFGVPILTWPIYAEQ-QLNAFRLVKEWGVGLGLRVDYRKG  406 (463)
T ss_dssp             CSEEEESSCCHHHHHH-STTEEEEEE---CCCHHHHHHHHHTTCCEEECCCSTTH-HHHHHHHHHTSCCEEESCSSCCTT
T ss_pred             CCEEEEccCCHHHHhC-CCccCeEEe---cCCchhHHHHHHcCCCeeeccchhhh-HHHHHHHHHHcCeEEEEecccCCC
Confidence            4667777777654321 136888882   45778999999999999999763332 333444 46777765551      


Q ss_pred             ---cCHHHHHHHHHHhcc
Q psy15363        113 ---RTHKEYQDIAIRLGT  127 (130)
Q Consensus       113 ---~~~~~y~~~a~~l~~  127 (130)
                         -+.++..+...++.+
T Consensus       407 ~~~~~~~~l~~ai~~ll~  424 (463)
T 2acv_A          407 SDVVAAEEIEKGLKDLMD  424 (463)
T ss_dssp             CCCCCHHHHHHHHHHHTC
T ss_pred             CccccHHHHHHHHHHHHh
Confidence               256677777767665

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=97.12  E-value=0.0013  Score=49.20  Aligned_cols=115  Identities=10%  Similarity=-0.027  Sum_probs=70.8

Q ss_pred             hHHHHHhhC--CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHH
Q psy15363          2 SDIFVLKAV--PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL   79 (130)
Q Consensus         2 ~w~~il~~~--P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAl   79 (130)
                      -|+++.+..  .+.++++.++++.+++..++..+.  .  ..+.+.|..+-.|+.++++.||+++.  .. .|.+-+ |.
T Consensus       198 ~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~--~--~~~~l~g~~sl~el~ali~~a~l~I~--~D-SG~~Hl-Aa  269 (326)
T 2gt1_A          198 HWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEG--F--AYVEVLPKMSLEGVARVLAGAKFVVS--VD-TGLSHL-TA  269 (326)
T ss_dssp             HHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTT--C--TTEEECCCCCHHHHHHHHHTCSEEEE--ES-SHHHHH-HH
T ss_pred             HHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhh--C--CcccccCCCCHHHHHHHHHhCCEEEe--cC-CcHHHH-HH
Confidence            366776665  367777764222333444444332  2  24678899999999999999999982  12 345555 66


Q ss_pred             hcCCcEEecCCCchhhhhHHHHHHhcCCC--------Cce-ecCHHHHHHHHHHhccCC
Q psy15363         80 WTGTPVVTLPGETLASRVAASQLATLGCP--------ELI-ARTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        80 a~G~PvV~~~g~~~~~r~~~~~l~~~g~~--------~~v-a~~~~~y~~~a~~l~~d~  129 (130)
                      ++|+|+|+.-|.....+++-     .+-.        .-+ .=++++-.+.+.+++++.
T Consensus       270 a~g~P~v~lfg~t~p~~~~P-----~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~~  323 (326)
T 2gt1_A          270 ALDRPNITVYGPTDPGLIGG-----YGKNQMVCRAPGNELSQLTANAVKQFIEENAEKA  323 (326)
T ss_dssp             HTTCCEEEEESSSCHHHHCC-----CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTTC
T ss_pred             HcCCCEEEEECCCChhhcCC-----CCCCceEecCCcccccCCCHHHHHHHHHHHHHHh
Confidence            79999999976554444320     1111        111 126788888887777653

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=96.93  E-value=0.0049  Score=49.12  Aligned_cols=82  Identities=12%  Similarity=0.054  Sum_probs=51.8

Q ss_pred             CCEEEecCCCHHHHHHhhcccc--EEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHh-cCCCCceec---
Q psy15363         40 HRILFSNVAAKEEHVRRGQLAD--VCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLAT-LGCPELIAR---  113 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~D--v~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~-~g~~~~va~---  113 (130)
                      +|+.+.+++|..+   ++..++  +|+   ..+|.++++||+++|+|.|+.+--.- ...-+..+.. .|..-.+..   
T Consensus       327 ~~~~vv~w~Pq~~---vL~h~~v~~fv---tH~G~~S~~Eal~~GvP~i~~P~~~D-Q~~Na~~v~~~~g~Gv~l~~~~~  399 (454)
T 3hbf_A          327 TKGKIVAWAPQVE---ILKHSSVGVFL---THSGWNSVLECIVGGVPMISRPFFGD-QGLNTILTESVLEIGVGVDNGVL  399 (454)
T ss_dssp             TTEEEESSCCHHH---HHHSTTEEEEE---ECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHTTSCSEEECGGGSC
T ss_pred             CceEEEeeCCHHH---HHhhcCcCeEE---ecCCcchHHHHHHcCCCEecCccccc-HHHHHHHHHHhhCeeEEecCCCC
Confidence            5788889998754   455777  666   24567899999999999999975321 2233445544 466543332   


Q ss_pred             CHHHHHHHHHHhccC
Q psy15363        114 THKEYQDIAIRLGTD  128 (130)
Q Consensus       114 ~~~~y~~~a~~l~~d  128 (130)
                      +.++..+...++.+|
T Consensus       400 ~~~~l~~av~~ll~~  414 (454)
T 3hbf_A          400 TKESIKKALELTMSS  414 (454)
T ss_dssp             CHHHHHHHHHHHHSS
T ss_pred             CHHHHHHHHHHHHCC
Confidence            445555555555544

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=96.36  E-value=0.0023  Score=46.60  Aligned_cols=77  Identities=16%  Similarity=0.169  Sum_probs=49.9

Q ss_pred             CEEEecCCCHHHHHHhhc-cccEEEcCCCCCCchHHHHHHhcCCcEEecCCCch---hhhhHHHHHHhcCCCCceecCHH
Q psy15363         41 RILFSNVAAKEEHVRRGQ-LADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL---ASRVAASQLATLGCPELIARTHK  116 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~-~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~---~~r~~~~~l~~~g~~~~va~~~~  116 (130)
                      ++...++.  +++..+|. .||+++.   .+|..|++|++++|+|.|..+....   .....+..+...|..-.+  +.+
T Consensus       115 ~v~v~~f~--~~m~~~l~~~AdlvIs---haGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~--~~~  187 (224)
T 2jzc_A          115 KVIGFDFS--TKMQSIIRDYSDLVIS---HAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC--APT  187 (224)
T ss_dssp             EEEECCSS--SSHHHHHHHHCSCEEE---SSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE--CSC
T ss_pred             eEEEeecc--chHHHHHHhcCCEEEE---CCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc--CHH
Confidence            45555666  45777889 9999982   3677899999999999998876432   122335556566764333  444


Q ss_pred             HHHHHHHH
Q psy15363        117 EYQDIAIR  124 (130)
Q Consensus       117 ~y~~~a~~  124 (130)
                      ++.+...+
T Consensus       188 ~L~~~i~~  195 (224)
T 2jzc_A          188 ETGLIAGL  195 (224)
T ss_dssp             TTTHHHHH
T ss_pred             HHHHHHHH
Confidence            44444333

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=96.21  E-value=0.025  Score=45.01  Aligned_cols=78  Identities=13%  Similarity=0.117  Sum_probs=47.4

Q ss_pred             EEecCCCHHHHHHhhcccc--EEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHH-HhcCCCCcee------c
Q psy15363         43 LFSNVAAKEEHVRRGQLAD--VCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL-ATLGCPELIA------R  113 (130)
Q Consensus        43 ~f~g~~~~~~~~~~~~~~D--v~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l-~~~g~~~~va------~  113 (130)
                      ++.+++|..+   ++..++  +|+   ..+|-+|++||+++|+|+|+.+--.- ...-+..+ ...|..-.+.      -
T Consensus       342 ~v~~w~Pq~~---vL~h~~v~~fv---tHgG~~S~~Eal~~GvP~i~~P~~~D-Q~~na~~l~~~~G~g~~l~~~~~~~~  414 (480)
T 2vch_A          342 VIPFWAPQAQ---VLAHPSTGGFL---THCGWNSTLESVVSGIPLIAWPLYAE-QKMNAVLLSEDIRAALRPRAGDDGLV  414 (480)
T ss_dssp             EEESCCCHHH---HHHSTTEEEEE---ECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHTTCCEECCCCCTTSCC
T ss_pred             EEeCccCHHH---HhCCCCcCeEE---ecccchhHHHHHHcCCCEEecccccc-chHHHHHHHHHhCeEEEeecccCCcc
Confidence            3445787654   455667  455   24567899999999999999975322 22334443 5666654332      2


Q ss_pred             CHHHHHHHHHHhcc
Q psy15363        114 THKEYQDIAIRLGT  127 (130)
Q Consensus       114 ~~~~y~~~a~~l~~  127 (130)
                      +.++..+...++.+
T Consensus       415 ~~~~l~~av~~vl~  428 (480)
T 2vch_A          415 RREEVARVVKGLME  428 (480)
T ss_dssp             CHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhc
Confidence            45555555555554

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=94.29  E-value=0.45  Score=40.56  Aligned_cols=79  Identities=13%  Similarity=0.103  Sum_probs=55.5

Q ss_pred             CcEEEEeecCccc-H--HHHHHHHHHc--------CCCCC--CEEEecCCCHHHHHHhhccccEEEcCCC--C-CCchHH
Q psy15363         12 NSILWLLKFPAVG-E--ANIQATAQAL--------GLDQH--RILFSNVAAKEEHVRRGQLADVCLDTPL--C-NGHTTS   75 (130)
Q Consensus        12 ~a~l~i~g~~~~~-~--~~l~~~~~~~--------g~~~~--rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~-~~g~~~   75 (130)
                      ...+++.|...|. .  ..+.+++.+.        .+. +  +|.|+..-+..--..++..||+++.++.  + .+|++-
T Consensus       555 p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~-~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~  633 (796)
T 2c4m_A          555 ARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVS-PLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSN  633 (796)
T ss_dssp             CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTT-TTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHH
T ss_pred             CeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence            3777788764332 1  2233333322        354 7  8999988876656678899999999874  4 589999


Q ss_pred             HHHHhcCCcEEec-CCC
Q psy15363         76 MDVLWTGTPVVTL-PGE   91 (130)
Q Consensus        76 lEAla~G~PvV~~-~g~   91 (130)
                      +=||.-|.+.|.. +|.
T Consensus       634 MKam~NGaL~iGtLDGa  650 (796)
T 2c4m_A          634 MKFMMNGALTLGTMDGA  650 (796)
T ss_dssp             HHHHHTTCEEEEESSTH
T ss_pred             HHHHHcCCeEEeccCCe
Confidence            9999999998865 443

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=94.15  E-value=0.49  Score=40.32  Aligned_cols=78  Identities=15%  Similarity=0.111  Sum_probs=55.3

Q ss_pred             cEEEEeecCccc-H--HHHHHHHHHc--------CCCCC--CEEEecCCCHHHHHHhhccccEEEcCCC--C-CCchHHH
Q psy15363         13 SILWLLKFPAVG-E--ANIQATAQAL--------GLDQH--RILFSNVAAKEEHVRRGQLADVCLDTPL--C-NGHTTSM   76 (130)
Q Consensus        13 a~l~i~g~~~~~-~--~~l~~~~~~~--------g~~~~--rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~-~~g~~~l   76 (130)
                      ..+++.|...|. .  ..+.+++.+.        .+. +  +|.|+..-+..--..++..||+++.++.  + .+|++-+
T Consensus       566 ~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~-~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~M  644 (796)
T 1l5w_A          566 RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVG-DKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNM  644 (796)
T ss_dssp             EEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTG-GGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHH
T ss_pred             eEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence            777777764332 1  2233333322        343 7  8999988876655678899999999874  4 5899999


Q ss_pred             HHHhcCCcEEec-CCC
Q psy15363         77 DVLWTGTPVVTL-PGE   91 (130)
Q Consensus        77 EAla~G~PvV~~-~g~   91 (130)
                      =||.-|.+.|.. +|.
T Consensus       645 Kam~NGaL~iGtLDGa  660 (796)
T 1l5w_A          645 KLALNGALTVGTLDGA  660 (796)
T ss_dssp             HHHHTTCEEEECSCTT
T ss_pred             HHHHcCCeeecCcCCe
Confidence            999999998865 454

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=93.98  E-value=0.25  Score=37.14  Aligned_cols=77  Identities=12%  Similarity=0.069  Sum_probs=55.1

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhcC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTG   82 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G   82 (130)
                      ...+++.|+++|+-+.+  ...++.+++++++|+.  ++    +-+.+++++- ...|+++-+.| ....-.+.+|+..|
T Consensus        40 ~~~~~~~~~~~lvav~d--~~~~~a~~~a~~~g~~--~~----y~d~~ell~~-~~iDaV~I~tP~~~H~~~~~~al~aG  110 (350)
T 4had_A           40 VPAIQDAENCVVTAIAS--RDLTRAREMADRFSVP--HA----FGSYEEMLAS-DVIDAVYIPLPTSQHIEWSIKAADAG  110 (350)
T ss_dssp             HHHHHHCSSEEEEEEEC--SSHHHHHHHHHHHTCS--EE----ESSHHHHHHC-SSCSEEEECSCGGGHHHHHHHHHHTT
T ss_pred             HHHHHhCCCeEEEEEEC--CCHHHHHHHHHHcCCC--ee----eCCHHHHhcC-CCCCEEEEeCCCchhHHHHHHHHhcC
Confidence            45678899999988885  4567788899999984  32    2345665431 34788854444 44566789999999


Q ss_pred             CcEEecC
Q psy15363         83 TPVVTLP   89 (130)
Q Consensus        83 ~PvV~~~   89 (130)
                      ++|++-+
T Consensus       111 khVl~EK  117 (350)
T 4had_A          111 KHVVCEK  117 (350)
T ss_dssp             CEEEECS
T ss_pred             CEEEEeC
Confidence            9999864

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=93.07  E-value=0.78  Score=39.24  Aligned_cols=80  Identities=15%  Similarity=0.148  Sum_probs=54.6

Q ss_pred             CcEEEEeecCccc-HH--H----HHHHHHHc----CCCCC--CEEEecCCCHHHHHHhhccccEEEcCCC--C-CCchHH
Q psy15363         12 NSILWLLKFPAVG-EA--N----IQATAQAL----GLDQH--RILFSNVAAKEEHVRRGQLADVCLDTPL--C-NGHTTS   75 (130)
Q Consensus        12 ~a~l~i~g~~~~~-~~--~----l~~~~~~~----g~~~~--rv~f~g~~~~~~~~~~~~~~Dv~l~~~~--~-~~g~~~   75 (130)
                      +..+++.|+..|. ..  .    +.+.++..    .+. +  +|.|+..-+..--..++..||+++.++.  + .+|++-
T Consensus       589 p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~-~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~  667 (824)
T 2gj4_A          589 PRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVG-DRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGN  667 (824)
T ss_dssp             CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTG-GGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHH
T ss_pred             CEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence            4678888864432 21  2    23333322    133 6  8999988876656678899999999874  4 589999


Q ss_pred             HHHHhcCCcEEe-cCCCc
Q psy15363         76 MDVLWTGTPVVT-LPGET   92 (130)
Q Consensus        76 lEAla~G~PvV~-~~g~~   92 (130)
                      +=||.-|++.|+ ++|.+
T Consensus       668 MKamlNGaLtigtlDGan  685 (824)
T 2gj4_A          668 MKFMLNGALTIGTMDGAN  685 (824)
T ss_dssp             HHHHHTTCEEEECSCTTH
T ss_pred             HHHHHcCceEEEEecCcc
Confidence            999999977665 46654

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=92.92  E-value=0.86  Score=33.59  Aligned_cols=75  Identities=8%  Similarity=-0.103  Sum_probs=53.5

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      +.+.+.+.|+..++-+.+  ...+..++.++++|+.  .     ..+.+++..   .+|+++-..|. ...-.+.+|+..
T Consensus        22 ~~~~l~~~~~~~l~av~d--~~~~~~~~~a~~~~~~--~-----~~~~~~ll~---~~D~V~i~tp~~~h~~~~~~al~~   89 (308)
T 3uuw_A           22 YLPILTKSERFEFVGAFT--PNKVKREKICSDYRIM--P-----FDSIESLAK---KCDCIFLHSSTETHYEIIKILLNL   89 (308)
T ss_dssp             THHHHTSCSSSEEEEEEC--SCHHHHHHHHHHHTCC--B-----CSCHHHHHT---TCSEEEECCCGGGHHHHHHHHHHT
T ss_pred             HHHHHHhCCCeEEEEEEC--CCHHHHHHHHHHcCCC--C-----cCCHHHHHh---cCCEEEEeCCcHhHHHHHHHHHHC
Confidence            456677889999886664  3556778888888874  1     344566654   89999665554 345667899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        90 gk~vl~EK   97 (308)
T 3uuw_A           90 GVHVYVDK   97 (308)
T ss_dssp             TCEEEECS
T ss_pred             CCcEEEcC
Confidence            99999853

>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}

Probab=92.01  E-value=1.5  Score=27.74  Aligned_cols=75  Identities=15%  Similarity=0.092  Sum_probs=49.1

Q ss_pred             CcEEEEeecCcc----cHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh--cCCcE
Q psy15363         12 NSILWLLKFPAV----GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW--TGTPV   85 (130)
Q Consensus        12 ~a~l~i~g~~~~----~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla--~G~Pv   85 (130)
                      .-+++++++.|-    ..+++++.+++.|++ -.|.-.+....++   .+..+|+++.+.+...-..-++..+  .++||
T Consensus         4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~-~~i~~~~~~~~~~---~~~~~D~Ii~t~~l~~~~~~~~~~~~~~~~pv   79 (109)
T 2l2q_A            4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNIN-ATIEAIAETRLSE---VVDRFDVVLLAPQSRFNKKRLEEITKPKGIPI   79 (109)
T ss_dssp             CEEEEEESSSSCSSCHHHHHHHHHHHHHTCS-EEEEEECSTTHHH---HTTTCSEEEECSCCSSHHHHHHHHHHHHTCCE
T ss_pred             ceEEEEECCChHhHHHHHHHHHHHHHHCCCC-eEEEEecHHHHHh---hcCCCCEEEECCccHHHHHHHHHHhcccCCCE
Confidence            456667665443    256889999999985 3455555444333   3678999998877654444555543  58999


Q ss_pred             EecCC
Q psy15363         86 VTLPG   90 (130)
Q Consensus        86 V~~~g   90 (130)
                      +..+.
T Consensus        80 ~~I~~   84 (109)
T 2l2q_A           80 EIINT   84 (109)
T ss_dssp             EECCH
T ss_pred             EEECh
Confidence            87653

>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=91.59  E-value=0.3  Score=34.94  Aligned_cols=77  Identities=16%  Similarity=0.153  Sum_probs=51.8

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe-cCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~-g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      -...++++|.....++.+++.+++-|...-.=+|+ |..+... ...|..=|+.+-+-|..-...+.||...|+|||++
T Consensus        63 ~~~~ilfV~tk~~~~~~V~k~A~~~g~~~v~~rw~gG~lTN~~-~~~~~~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial  140 (202)
T 3j20_B           63 EPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPA-VKNFFEPDVLIVTDPRADHQAMREAVEIGIPIVAL  140 (202)
T ss_dssp             CSSCEEEECCCTTTHHHHHHHHHHHSCCCCCSSCCSSSSSCSS-SSSCCCCSEEEESCTTTSHHHHHHHHHHTCCEEEE
T ss_pred             CCCeEEEEecChHHHHHHHHHHHHHCCceeCceecCCCcccHh-HHhccCCCeEEEeCCccchHHHHHHHHcCCCEEEE
Confidence            34667788876566778888888777543233344 3444332 23456777776555666678899999999999976

>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}

Probab=89.62  E-value=3  Score=27.22  Aligned_cols=111  Identities=11%  Similarity=0.048  Sum_probs=72.6

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--cccEE-EcC-CCCCCchHHHHHHh-----c
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVC-LDT-PLCNGHTTSMDVLW-----T   81 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--~~Dv~-l~~-~~~~~g~~~lEAla-----~   81 (130)
                      .+.+++++-+....+..+++.+++.|..  .|....  +..+-...++  .-|+. +|- .|.-.|..+++.+-     .
T Consensus        11 k~~rILiVDD~~~~r~~l~~~L~~~G~~--~v~~a~--~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~   86 (134)
T 3to5_A           11 KNMKILIVDDFSTMRRIVKNLLRDLGFN--NTQEAD--DGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELK   86 (134)
T ss_dssp             TTCCEEEECSCHHHHHHHHHHHHHTTCC--CEEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTT
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHHcCCc--EEEEEC--CHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCC
Confidence            3578888887545678888999999973  454332  2233333333  37888 453 47778999998884     5


Q ss_pred             CCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc
Q psy15363         82 GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT  127 (130)
Q Consensus        82 G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~  127 (130)
                      .+|||.+.+.........  ....|..+++..  +.+++.+...++++
T Consensus        87 ~ipvI~lTa~~~~~~~~~--~~~~Ga~~yl~KP~~~~~L~~~i~~~l~  132 (134)
T 3to5_A           87 HLPVLMITAEAKREQIIE--AAQAGVNGYIVKPFTAATLKEKLDKIFE  132 (134)
T ss_dssp             TCCEEEEESSCCHHHHHH--HHHTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred             CCeEEEEECCCCHHHHHH--HHHCCCCEEEECCCCHHHHHHHHHHHHh
Confidence            689998866543332221  234699887764  78888888777653

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=89.55  E-value=1  Score=33.86  Aligned_cols=77  Identities=8%  Similarity=-0.118  Sum_probs=52.8

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~   81 (130)
                      ..+.+.+.|+..++-+.+  ...++.++.++++|+. .      ..+.+++.+ -..+|+++.+.| ....-.+.+|+..
T Consensus        20 ~~~~l~~~~~~~lvav~d--~~~~~~~~~~~~~g~~-~------~~~~~~~l~-~~~~D~V~i~tp~~~h~~~~~~al~~   89 (354)
T 3db2_A           20 MADAYTKSEKLKLVTCYS--RTEDKREKFGKRYNCA-G------DATMEALLA-REDVEMVIITVPNDKHAEVIEQCARS   89 (354)
T ss_dssp             HHHHHTTCSSEEEEEEEC--SSHHHHHHHHHHHTCC-C------CSSHHHHHH-CSSCCEEEECSCTTSHHHHHHHHHHT
T ss_pred             HHHHHHhCCCcEEEEEEC--CCHHHHHHHHHHcCCC-C------cCCHHHHhc-CCCCCEEEEeCChHHHHHHHHHHHHc
Confidence            456677889999887764  3456777888888874 1      234455542 145898865554 4445668899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        90 gk~vl~EK   97 (354)
T 3db2_A           90 GKHIYVEK   97 (354)
T ss_dssp             TCEEEEES
T ss_pred             CCEEEEcc
Confidence            99999864

>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}

Probab=89.47  E-value=1.9  Score=32.99  Aligned_cols=77  Identities=9%  Similarity=0.007  Sum_probs=53.1

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      +.+.+.+.|+..++-+.+  ...++.++.++++|+.    .   .-+.++++.- ..+|+++-..|. ...-.+.+|+..
T Consensus        18 ~~~~l~~~~~~~l~av~d--~~~~~~~~~a~~~g~~----~---~~~~~ell~~-~~vD~V~i~tp~~~H~~~~~~al~a   87 (387)
T 3moi_A           18 MAPAMRHHPDAQIVAACD--PNEDVRERFGKEYGIP----V---FATLAEMMQH-VQMDAVYIASPHQFHCEHVVQASEQ   87 (387)
T ss_dssp             HHHHHHHCTTEEEEEEEC--SCHHHHHHHHHHHTCC----E---ESSHHHHHHH-SCCSEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHHhCCCeEEEEEEe--CCHHHHHHHHHHcCCC----e---ECCHHHHHcC-CCCCEEEEcCCcHHHHHHHHHHHHC
Confidence            456677889999887775  3456677778888873    1   2345665441 248999665553 345668899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        88 Gk~Vl~EK   95 (387)
T 3moi_A           88 GLHIIVEK   95 (387)
T ss_dssp             TCEEEECS
T ss_pred             CCceeeeC
Confidence            99999864

>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A

Probab=89.27  E-value=2.7  Score=26.21  Aligned_cols=109  Identities=10%  Similarity=-0.004  Sum_probs=66.8

Q ss_pred             CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--cccEEEcCCCCCCchHHHHHHhc---CCc
Q psy15363         10 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTPLCNGHTTSMDVLWT---GTP   84 (130)
Q Consensus        10 ~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--~~Dv~l~~~~~~~g~~~lEAla~---G~P   84 (130)
                      .++.+++++.+.......+++.+++.|.   +|....  +.++....+.  ..|+.+  .+...|..+++.+..   .+|
T Consensus        16 ~~~~~ilivdd~~~~~~~l~~~L~~~g~---~v~~~~--~~~~al~~l~~~~~dlvi--~~~~~g~~~~~~l~~~~~~~~   88 (137)
T 2pln_A           16 RGSMRVLLIEKNSVLGGEIEKGLNVKGF---MADVTE--SLEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSSIV   88 (137)
T ss_dssp             TTCSEEEEECSCHHHHHHHHHHHHHTTC---EEEEES--CHHHHHHHHHHSCCSEEE--ECSTTHHHHHHHHHHHSTTSE
T ss_pred             CCCCeEEEEeCCHHHHHHHHHHHHHcCc---EEEEeC--CHHHHHHHHHcCCCCEEE--EcCccHHHHHHHHHhcCCCcc
Confidence            3456888888644456778888888775   344333  3344444443  479999  555567777766653   789


Q ss_pred             EEecCCCchhhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhcc
Q psy15363         85 VVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGT  127 (130)
Q Consensus        85 vV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~~  127 (130)
                      ||.+.+..-.....  -....|..+++..   +.+++.....++.+
T Consensus        89 ii~ls~~~~~~~~~--~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~  132 (137)
T 2pln_A           89 VLVSSDNPTSEEEV--HAFEQGADDYIAKPYRSIKALVARIEARLR  132 (137)
T ss_dssp             EEEEESSCCHHHHH--HHHHTTCSEEEESSCSCHHHHHHHHHHHTC
T ss_pred             EEEEeCCCCHHHHH--HHHHcCCceeeeCCCCCHHHHHHHHHHHHh
Confidence            99886543322222  1224588886653   67787777766554

>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0

Probab=89.21  E-value=2.8  Score=26.37  Aligned_cols=110  Identities=12%  Similarity=0.131  Sum_probs=66.2

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--cccEEE-cCC-CCCCchHHHHHHhc-----C
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCL-DTP-LCNGHTTSMDVLWT-----G   82 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--~~Dv~l-~~~-~~~~g~~~lEAla~-----G   82 (130)
                      +.+++++.+.......+++.+++.|.. ..|....  +.++....+.  ..|+++ |.. +...|..+++.+..     .
T Consensus         5 ~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~~--~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~   81 (144)
T 3kht_A            5 SKRVLVVEDNPDDIALIRRVLDRKDIH-CQLEFVD--NGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQH   81 (144)
T ss_dssp             CEEEEEECCCHHHHHHHHHHHHHTTCC-EEEEEES--SHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCC-eeEEEEC--CHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccC
Confidence            467778876444567888888888763 2344433  3345444443  368874 543 44567778887765     6


Q ss_pred             CcEEecCCCchhhhhHHHHHHhcCCCCceec---CHHHHHHHHHHhc
Q psy15363         83 TPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLG  126 (130)
Q Consensus        83 ~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~---~~~~y~~~a~~l~  126 (130)
                      +|+|.+.+..-......  ....|..+++..   +.+++.+...+++
T Consensus        82 ~pii~~s~~~~~~~~~~--~~~~ga~~~l~Kp~~~~~~l~~~i~~~l  126 (144)
T 3kht_A           82 TPIVILTDNVSDDRAKQ--CMAAGASSVVDKSSNNVTDFYGRIYAIF  126 (144)
T ss_dssp             CCEEEEETTCCHHHHHH--HHHTTCSEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHH--HHHcCCCEEEECCCCcHHHHHHHHHHHH
Confidence            89998866433222221  224588887653   5677766665543

>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A

Probab=89.00  E-value=2.8  Score=25.98  Aligned_cols=111  Identities=14%  Similarity=0.079  Sum_probs=67.3

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhh---ccccEEE-cC-CCCCCchHHHHHHhc-----
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG---QLADVCL-DT-PLCNGHTTSMDVLWT-----   81 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~---~~~Dv~l-~~-~~~~~g~~~lEAla~-----   81 (130)
                      ..+++++.+....+..+++.+++.|..  .+....  +..+....+   ...|+++ |. .|...|..+++.+..     
T Consensus         5 ~~~iLivdd~~~~~~~l~~~L~~~g~~--~v~~~~--~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~   80 (129)
T 3h1g_A            5 SMKLLVVDDSSTMRRIIKNTLSRLGYE--DVLEAE--HGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFK   80 (129)
T ss_dssp             -CCEEEECSCHHHHHHHHHHHHHTTCC--CEEEES--SHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCT
T ss_pred             CcEEEEEeCCHHHHHHHHHHHHHcCCc--EEEEeC--CHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCC
Confidence            356778876444577888888888863  444433  223332222   2478885 54 366678888888753     


Q ss_pred             CCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhccC
Q psy15363         82 GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTD  128 (130)
Q Consensus        82 G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~d  128 (130)
                      .+|||.+.+..-.....  -....|..+++..  +.+++.+...++++.
T Consensus        81 ~~pii~~s~~~~~~~~~--~~~~~g~~~~l~KP~~~~~L~~~l~~~l~~  127 (129)
T 3h1g_A           81 EIPIIMITAEGGKAEVI--TALKAGVNNYIVKPFTPQVLKEKLEVVLGT  127 (129)
T ss_dssp             TCCEEEEESCCSHHHHH--HHHHHTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred             CCeEEEEeCCCChHHHH--HHHHcCccEEEeCCCCHHHHHHHHHHHhcc
Confidence            68998876643322221  1224588887663  778888877766553

>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1

Probab=88.73  E-value=2.9  Score=25.82  Aligned_cols=110  Identities=13%  Similarity=0.074  Sum_probs=65.7

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc---------cccEEE-cCC-CCCCchHHHHHHh
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---------LADVCL-DTP-LCNGHTTSMDVLW   80 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~---------~~Dv~l-~~~-~~~~g~~~lEAla   80 (130)
                      +.+++++.+.......+++.+++.|.. ..|....  +.++....+.         ..|+++ |.. +...|..+++.+.
T Consensus         2 ~~~ilivdd~~~~~~~l~~~L~~~~~~-~~v~~~~--~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~   78 (140)
T 1k68_A            2 HKKIFLVEDNKADIRLIQEALANSTVP-HEVVTVR--DGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIK   78 (140)
T ss_dssp             CCEEEEECCCHHHHHHHHHHHHTCSSC-CEEEEEC--SHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHH
T ss_pred             CCeEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEC--CHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHH
Confidence            346777876444567888888888763 3455444  3355555554         478884 533 4446777777765


Q ss_pred             -----cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhc
Q psy15363         81 -----TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG  126 (130)
Q Consensus        81 -----~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~  126 (130)
                           ..+|+|.+.+..-......  ....|..+++..  +.+++.+...++.
T Consensus        79 ~~~~~~~~pii~ls~~~~~~~~~~--~~~~g~~~~l~kP~~~~~l~~~i~~~~  129 (140)
T 1k68_A           79 SDPTLKRIPVVVLSTSINEDDIFH--SYDLHVNCYITKSANLSQLFQIVKGIE  129 (140)
T ss_dssp             HSTTGGGSCEEEEESCCCHHHHHH--HHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred             cCcccccccEEEEecCCcHHHHHH--HHHhchhheecCCCCHHHHHHHHHHHH
Confidence                 4689988765433222221  224588887653  6667666655443

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=88.61  E-value=1.1  Score=33.47  Aligned_cols=78  Identities=15%  Similarity=0.076  Sum_probs=51.0

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~   81 (130)
                      +.+.+.+.|+..++-+.+  ...+..+++++++|+.  +    ...+.+++..- ..+|+++...| ....-.+.+|+..
T Consensus        20 ~~~~l~~~~~~~l~av~d--~~~~~~~~~~~~~~~~--~----~~~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~~   90 (330)
T 3e9m_A           20 FVAGLRESAQAEVRGIAS--RRLENAQKMAKELAIP--V----AYGSYEELCKD-ETIDIIYIPTYNQGHYSAAKLALSQ   90 (330)
T ss_dssp             HHHHHHHSSSEEEEEEBC--SSSHHHHHHHHHTTCC--C----CBSSHHHHHHC-TTCSEEEECCCGGGHHHHHHHHHHT
T ss_pred             HHHHHHhCCCcEEEEEEe--CCHHHHHHHHHHcCCC--c----eeCCHHHHhcC-CCCCEEEEcCCCHHHHHHHHHHHHC
Confidence            456677789888876664  2345677788888873  1    12334454321 26898865554 3445667899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        91 gk~vl~EK   98 (330)
T 3e9m_A           91 GKPVLLEK   98 (330)
T ss_dssp             TCCEEECS
T ss_pred             CCeEEEeC
Confidence            99999864

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=88.53  E-value=1.2  Score=33.42  Aligned_cols=75  Identities=20%  Similarity=0.120  Sum_probs=49.7

Q ss_pred             HHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEc-CCCCCCchHHHHHHhcCCc
Q psy15363          6 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD-TPLCNGHTTSMDVLWTGTP   84 (130)
Q Consensus         6 il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~-~~~~~~g~~~lEAla~G~P   84 (130)
                      ++...|+++|+-+.+  ...++.++.++++|+.  ++    +-+.+++++- ...|+++- |.+....-.+.+|+..|++
T Consensus        50 ~~~~~~~~~lvav~d--~~~~~a~~~a~~~g~~--~~----y~d~~ell~~-~~iDaV~IatP~~~H~~~a~~al~aGkh  120 (393)
T 4fb5_A           50 VFGDVERPRLVHLAE--ANAGLAEARAGEFGFE--KA----TADWRALIAD-PEVDVVSVTTPNQFHAEMAIAALEAGKH  120 (393)
T ss_dssp             HHCSSCCCEEEEEEC--C--TTHHHHHHHHTCS--EE----ESCHHHHHHC-TTCCEEEECSCGGGHHHHHHHHHHTTCE
T ss_pred             hhccCCCcEEEEEEC--CCHHHHHHHHHHhCCC--ee----cCCHHHHhcC-CCCcEEEECCChHHHHHHHHHHHhcCCe
Confidence            344567888888875  3445677888888874  22    2345665431 34788854 4445556779999999999


Q ss_pred             EEecC
Q psy15363         85 VVTLP   89 (130)
Q Consensus        85 vV~~~   89 (130)
                      |++-+
T Consensus       121 Vl~EK  125 (393)
T 4fb5_A          121 VWCEK  125 (393)
T ss_dssp             EEECS
T ss_pred             EEEcc
Confidence            99964

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=88.27  E-value=1.4  Score=32.97  Aligned_cols=78  Identities=10%  Similarity=0.089  Sum_probs=51.4

Q ss_pred             HHHHh-hCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          4 IFVLK-AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         4 ~~il~-~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      .+.+. +.|+..++-+.+  ...++.++.++++|+. .++    ..+.+++..- ..+|+++-..|. ...-.+.+|+..
T Consensus        18 ~~~l~~~~~~~~l~av~d--~~~~~~~~~~~~~g~~-~~~----~~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~~   89 (344)
T 3mz0_A           18 INRITNKLSGAEIVAVTD--VNQEAAQKVVEQYQLN-ATV----YPNDDSLLAD-ENVDAVLVTSWGPAHESSVLKAIKA   89 (344)
T ss_dssp             HHHHHHTCSSEEEEEEEC--SSHHHHHHHHHHTTCC-CEE----ESSHHHHHHC-TTCCEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHhhCCCcEEEEEEc--CCHHHHHHHHHHhCCC-Cee----eCCHHHHhcC-CCCCEEEECCCchhHHHHHHHHHHC
Confidence            44555 779999887764  3556778888888863 221    2334554431 238988655553 445668899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        90 Gk~vl~EK   97 (344)
T 3mz0_A           90 QKYVFCEK   97 (344)
T ss_dssp             TCEEEECS
T ss_pred             CCcEEEcC
Confidence            99999854

>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A

Probab=88.21  E-value=1.9  Score=32.53  Aligned_cols=81  Identities=10%  Similarity=-0.052  Sum_probs=52.4

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      +.+.+.+.|+..++.+.+  ...+..+++++++|+. ..+...  .+.++++.- ..+|+++...|. ...-.+.+|+..
T Consensus        21 ~~~~l~~~~~~~lv~v~d--~~~~~~~~~a~~~~~~-~~~~~~--~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~a   94 (362)
T 1ydw_A           21 VSRAIHLAPNATISGVAS--RSLEKAKAFATANNYP-ESTKIH--GSYESLLED-PEIDALYVPLPTSLHVEWAIKAAEK   94 (362)
T ss_dssp             HHHHHHHCTTEEEEEEEC--SSHHHHHHHHHHTTCC-TTCEEE--SSHHHHHHC-TTCCEEEECCCGGGHHHHHHHHHTT
T ss_pred             HHHHHhhCCCcEEEEEEc--CCHHHHHHHHHHhCCC-CCCeee--CCHHHHhcC-CCCCEEEEcCChHHHHHHHHHHHHC
Confidence            345567788888877775  3455677888888874 222222  233444321 148999766554 345668899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        95 Gk~V~~EK  102 (362)
T 1ydw_A           95 GKHILLEK  102 (362)
T ss_dssp             TCEEEECS
T ss_pred             CCeEEEec
Confidence            99999854

>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0

Probab=88.19  E-value=3.5  Score=26.21  Aligned_cols=109  Identities=14%  Similarity=0.136  Sum_probs=67.7

Q ss_pred             cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhh-----------ccccEE-EcC-CCCCCchHHHHHH
Q psy15363         13 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG-----------QLADVC-LDT-PLCNGHTTSMDVL   79 (130)
Q Consensus        13 a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~-----------~~~Dv~-l~~-~~~~~g~~~lEAl   79 (130)
                      .+++++.+.......+++.+++.|.. .+|.....  ..+....+           ...|++ +|. .|...|..+++.+
T Consensus         5 ~~ILivddd~~~~~~l~~~L~~~g~~-~~v~~~~~--~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~l   81 (152)
T 3heb_A            5 VTIVMIEDDLGHARLIEKNIRRAGVN-NEIIAFTD--GTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLV   81 (152)
T ss_dssp             CEEEEECCCHHHHHHHHHHHHHTTCC-CCEEEESS--HHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHH
T ss_pred             ceEEEEeCCHHHHHHHHHHHHhCCCc-ceEEEeCC--HHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHH
Confidence            56778876444567888899998874 46665543  34554544           347888 454 3555688888877


Q ss_pred             hc-----CCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhc
Q psy15363         80 WT-----GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG  126 (130)
Q Consensus        80 a~-----G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~  126 (130)
                      ..     .+|+|...+..-.....  -....|..+++..  +.+++.+...++.
T Consensus        82 r~~~~~~~~pii~~t~~~~~~~~~--~~~~~g~~~~l~KP~~~~~l~~~i~~~~  133 (152)
T 3heb_A           82 KENPHTRRSPVVILTTTDDQREIQ--RCYDLGANVYITKPVNYENFANAIRQLG  133 (152)
T ss_dssp             HHSTTTTTSCEEEEESCCCHHHHH--HHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred             HhcccccCCCEEEEecCCCHHHHH--HHHHCCCcEEEeCCCCHHHHHHHHHHHH
Confidence            64     68898876643322221  1234588886653  6677776665543

>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A

Probab=88.15  E-value=1.2  Score=30.99  Aligned_cols=68  Identities=16%  Similarity=0.024  Sum_probs=46.9

Q ss_pred             hhccccEEEcCCCCCCch--HHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCC-ceecCHHHHHHHHHHhccC
Q psy15363         56 RGQLADVCLDTPLCNGHT--TSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPE-LIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        56 ~~~~~Dv~l~~~~~~~g~--~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~-~va~~~~~y~~~a~~l~~d  128 (130)
                      +...+|.|+- .|-+.|+  .+.||+..++||+.+++..    ....++..-..+. .+++|+++.++...++.++
T Consensus       104 m~~~sda~Iv-lpGg~GTL~E~~~al~~~kpV~~l~~~~----~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~~  174 (176)
T 2iz6_A          104 NALSSNVLVA-VGMGPGTAAEVALALKAKKPVVLLGTQP----EAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK  174 (176)
T ss_dssp             CGGGCSEEEE-ESCCHHHHHHHHHHHHTTCCEEEESCCH----HHHHHHHHHCTTTEEEESSHHHHHHHHHHHHHC
T ss_pred             HHHhCCEEEE-ecCCccHHHHHHHHHHhCCcEEEEcCcc----cccccCChhhcCeEEEcCCHHHHHHHHHHHHHh
Confidence            3456787753 2323343  5889999999999998832    4555666544544 4679999999988887654

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=87.69  E-value=2.1  Score=31.83  Aligned_cols=76  Identities=12%  Similarity=-0.014  Sum_probs=51.8

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      +.+.+.+.|+..++-+.+  ...+..+++++++|+.        ..+.+++..- ..+|+++...|. ...-.+.+|+..
T Consensus        18 ~~~~l~~~~~~~l~av~d--~~~~~~~~~~~~~~~~--------~~~~~~~l~~-~~~D~V~i~tp~~~h~~~~~~al~~   86 (331)
T 4hkt_A           18 HAKAVSGNADARLVAVAD--AFPAAAEAIAGAYGCE--------VRTIDAIEAA-ADIDAVVICTPTDTHADLIERFARA   86 (331)
T ss_dssp             HHHHHHHCTTEEEEEEEC--SSHHHHHHHHHHTTCE--------ECCHHHHHHC-TTCCEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHhhCCCcEEEEEEC--CCHHHHHHHHHHhCCC--------cCCHHHHhcC-CCCCEEEEeCCchhHHHHHHHHHHc
Confidence            456677789999886664  3456677788887762        2344555431 268998665553 445678899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        87 gk~v~~EK   94 (331)
T 4hkt_A           87 GKAIFCEK   94 (331)
T ss_dssp             TCEEEECS
T ss_pred             CCcEEEec
Confidence            99999854

>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A

Probab=87.60  E-value=0.49  Score=33.94  Aligned_cols=77  Identities=16%  Similarity=0.107  Sum_probs=50.2

Q ss_pred             CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe-cCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         11 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        11 P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~-g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      ...+++++|.....++.+++.+++.|...-.=+|+ |.++...+ ..+..=|+.+-+-|..-...+.||...|+|||+.
T Consensus        67 ~~~~iLfVgTk~~~~~~V~~~A~~~g~~~v~~rwlgG~LTN~~~-~~f~~PdlliV~Dp~~e~~ai~EA~~l~IPvIal  144 (208)
T 1vi6_A           67 EPSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPML-SEYREPEVVFVNDPAIDKQAVSEATAVGIPVVAL  144 (208)
T ss_dssp             CGGGEEEEECSGGGHHHHHHHHHHHCCEEEESSCCTTTTTCTTS-TTCCCCSEEEESCTTTTHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHHhCCeeecCEECCCcccChhh-HhhCCCCEEEEECCCcchhHHHHHHHhCCCEEEE
Confidence            44677788875556777888888777431111243 33443322 3355677776555555678999999999999987

>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A

Probab=87.25  E-value=5.4  Score=27.26  Aligned_cols=110  Identities=8%  Similarity=0.135  Sum_probs=67.0

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc---------------cccEE-EcC-CCCCCchH
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---------------LADVC-LDT-PLCNGHTT   74 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~---------------~~Dv~-l~~-~~~~~g~~   74 (130)
                      +.+++++.+....+..+++.+++.|..  +|....  +.++....+.               ..|++ +|- .|...|..
T Consensus        61 ~~~ILiVdDd~~~~~~l~~~L~~~g~~--~v~~a~--~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~e  136 (206)
T 3mm4_A           61 GKRVLVVDDNFISRKVATGKLKKMGVS--EVEQCD--SGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYE  136 (206)
T ss_dssp             TCEEEEECSCHHHHHHHHHHHHHTTCS--EEEEES--SHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCC--eeeeeC--CHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHH
Confidence            457888886544567888889988863  455443  3345444443               47888 454 36666887


Q ss_pred             HHHHHh-------cCCcEEecCCCc-hhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhcc
Q psy15363         75 SMDVLW-------TGTPVVTLPGET-LASRVAASQLATLGCPELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        75 ~lEAla-------~G~PvV~~~g~~-~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~  127 (130)
                      +++.+.       ..+|||.+.+.. -..... . ....|..+++....+++.+...++++
T Consensus       137 l~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~-~-~~~~Ga~~~l~KP~~~L~~~i~~~l~  195 (206)
T 3mm4_A          137 ATREIRKVEKSYGVRTPIIAVSGHDPGSEEAR-E-TIQAGMDAFLDKSLNQLANVIREIES  195 (206)
T ss_dssp             HHHHHHHHHHTTTCCCCEEEEESSCCCHHHHH-H-HHHHTCSEEEETTCTTHHHHHHHHC-
T ss_pred             HHHHHHhhhhhcCCCCcEEEEECCCCcHHHHH-H-HHhCCCCEEEcCcHHHHHHHHHHHHh
Confidence            777765       568999887653 212111 1 22358888777655566666655543

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=86.87  E-value=2  Score=32.18  Aligned_cols=78  Identities=15%  Similarity=0.163  Sum_probs=51.8

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      ..+.+.+.|+..++-+.+  ...++.+++++++|+.  ++    ..+.+++..- ..+|+++-..|. ...-.+.+|+..
T Consensus        17 ~~~~l~~~~~~~l~av~d--~~~~~~~~~~~~~~~~--~~----~~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~~   87 (344)
T 3ezy_A           17 HAENLKMIDDAILYAISD--VREDRLREMKEKLGVE--KA----YKDPHELIED-PNVDAVLVCSSTNTHSELVIACAKA   87 (344)
T ss_dssp             HHHHGGGSTTEEEEEEEC--SCHHHHHHHHHHHTCS--EE----ESSHHHHHHC-TTCCEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHHhCCCcEEEEEEC--CCHHHHHHHHHHhCCC--ce----eCCHHHHhcC-CCCCEEEEcCCCcchHHHHHHHHhc
Confidence            455667789999886764  3456677788888863  22    2334554331 268998665554 345567899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        88 gk~v~~EK   95 (344)
T 3ezy_A           88 KKHVFCEK   95 (344)
T ss_dssp             TCEEEEES
T ss_pred             CCeEEEEC
Confidence            99999864

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=86.39  E-value=3.8  Score=31.94  Aligned_cols=80  Identities=9%  Similarity=-0.034  Sum_probs=49.0

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHH---HcCCCCCCEEEec-CCCHHHHHHhhc--cccEEEcCCCC-CCchHHH
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQ---ALGLDQHRILFSN-VAAKEEHVRRGQ--LADVCLDTPLC-NGHTTSM   76 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~---~~g~~~~rv~f~g-~~~~~~~~~~~~--~~Dv~l~~~~~-~~g~~~l   76 (130)
                      .+.+.+.|+..++-+.+  ...++.++.++   ++|+. +--.+.+ .-+.++   ++.  .+|+++-+.|. ...-.+.
T Consensus        36 ~~~l~~~~~~~lvav~d--~~~~~~~~~a~~~~~~g~~-~~~~~~~~~~~~~~---ll~~~~vD~V~i~tp~~~h~~~~~  109 (444)
T 2ixa_A           36 VENMARRDDVEIVAFAD--PDPYMVGRAQEILKKNGKK-PAKVFGNGNDDYKN---MLKDKNIDAVFVSSPWEWHHEHGV  109 (444)
T ss_dssp             HHHHHTCTTEEEEEEEC--SCHHHHHHHHHHHHHTTCC-CCEEECSSTTTHHH---HTTCTTCCEEEECCCGGGHHHHHH
T ss_pred             HHHHHhCCCcEEEEEEe--CCHHHHHHHHHHHHhcCCC-CCceeccCCCCHHH---HhcCCCCCEEEEcCCcHHHHHHHH
Confidence            45566778888887775  33444454443   56764 2223331 123344   444  48988665553 4456788


Q ss_pred             HHHhcCCcEEecC
Q psy15363         77 DVLWTGTPVVTLP   89 (130)
Q Consensus        77 EAla~G~PvV~~~   89 (130)
                      .||..|++|++-+
T Consensus       110 ~al~aGkhV~~EK  122 (444)
T 2ixa_A          110 AAMKAGKIVGMEV  122 (444)
T ss_dssp             HHHHTTCEEEECC
T ss_pred             HHHHCCCeEEEeC
Confidence            9999999999864

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=86.22  E-value=3.7  Score=30.71  Aligned_cols=77  Identities=16%  Similarity=0.028  Sum_probs=50.8

Q ss_pred             HHHHhhC-CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhc
Q psy15363          4 IFVLKAV-PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWT   81 (130)
Q Consensus         4 ~~il~~~-P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~   81 (130)
                      .+.+.+. |+.+++-+.+  ...++.+++++++|+.  ++    +.+.++++.- ..+|+++-+.| ....-.+.+|+..
T Consensus        35 ~~~l~~~~~~~~lvav~d--~~~~~~~~~a~~~~~~--~~----~~~~~~ll~~-~~vD~V~i~tp~~~H~~~~~~al~a  105 (340)
T 1zh8_A           35 LPALKNLSHLFEITAVTS--RTRSHAEEFAKMVGNP--AV----FDSYEELLES-GLVDAVDLTLPVELNLPFIEKALRK  105 (340)
T ss_dssp             HHHHHTTTTTEEEEEEEC--SSHHHHHHHHHHHSSC--EE----ESCHHHHHHS-SCCSEEEECCCGGGHHHHHHHHHHT
T ss_pred             HHHHHhCCCceEEEEEEc--CCHHHHHHHHHHhCCC--cc----cCCHHHHhcC-CCCCEEEEeCCchHHHHHHHHHHHC
Confidence            4456667 8888877775  3456677788888762  11    2334555431 25899965554 3445678899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus       106 GkhVl~EK  113 (340)
T 1zh8_A          106 GVHVICEK  113 (340)
T ss_dssp             TCEEEEES
T ss_pred             CCcEEEeC
Confidence            99999864

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=86.14  E-value=1.4  Score=34.14  Aligned_cols=79  Identities=15%  Similarity=0.070  Sum_probs=50.0

Q ss_pred             HHHhhCCCcEEEE-eecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhh----ccccEEEcCCC-CCCchHHHHH
Q psy15363          5 FVLKAVPNSILWL-LKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG----QLADVCLDTPL-CNGHTTSMDV   78 (130)
Q Consensus         5 ~il~~~P~a~l~i-~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~----~~~Dv~l~~~~-~~~g~~~lEA   78 (130)
                      ..+...|+..++. +.+  ...++.++.++++|+...++    +-+.++++.--    ..+|+++-..| ....-.+.+|
T Consensus        57 ~~~~~~~~~~lva~v~d--~~~~~a~~~a~~~g~~~~~~----~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~a  130 (417)
T 3v5n_A           57 IAARLDDHYELVAGALS--STPEKAEASGRELGLDPSRV----YSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEF  130 (417)
T ss_dssp             HHHHHTSCEEEEEEECC--SSHHHHHHHHHHHTCCGGGB----CSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHH
T ss_pred             HHHhhCCCcEEEEEEeC--CCHHHHHHHHHHcCCCcccc----cCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHH
Confidence            3456677777763 543  34566778888888752122    23455554421    13898865554 4456678999


Q ss_pred             HhcCCcEEecC
Q psy15363         79 LWTGTPVVTLP   89 (130)
Q Consensus        79 la~G~PvV~~~   89 (130)
                      +..|++|++-+
T Consensus       131 l~aGkhVl~EK  141 (417)
T 3v5n_A          131 LKRGIHVICDK  141 (417)
T ss_dssp             HTTTCEEEEES
T ss_pred             HhCCCeEEEEC
Confidence            99999999864

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=86.07  E-value=2  Score=31.96  Aligned_cols=78  Identities=15%  Similarity=0.086  Sum_probs=51.7

Q ss_pred             HHHHHhhCCC--cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHH
Q psy15363          3 DIFVLKAVPN--SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVL   79 (130)
Q Consensus         3 w~~il~~~P~--a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAl   79 (130)
                      +.+.+.+.|+  .+++-+.+  ...++.+++++++|+.  ++    .-+.++++.- ..+|+++-+.| ....-.+.+|+
T Consensus        17 ~~~~l~~~~~~~~~l~av~d--~~~~~a~~~a~~~~~~--~~----~~~~~~ll~~-~~vD~V~i~tp~~~H~~~~~~al   87 (334)
T 3ohs_X           17 FTAVLQTLPRSEHQVVAVAA--RDLSRAKEFAQKHDIP--KA----YGSYEELAKD-PNVEVAYVGTQHPQHKAAVMLCL   87 (334)
T ss_dssp             HHHHHTTSCTTTEEEEEEEC--SSHHHHHHHHHHHTCS--CE----ESSHHHHHHC-TTCCEEEECCCGGGHHHHHHHHH
T ss_pred             HHHHHHhCCCCCeEEEEEEc--CCHHHHHHHHHHcCCC--cc----cCCHHHHhcC-CCCCEEEECCCcHHHHHHHHHHH
Confidence            4556777775  56766664  4556778888888874  22    2344555431 25899865554 34456688999


Q ss_pred             hcCCcEEecC
Q psy15363         80 WTGTPVVTLP   89 (130)
Q Consensus        80 a~G~PvV~~~   89 (130)
                      ..|++|++-+
T Consensus        88 ~~GkhVl~EK   97 (334)
T 3ohs_X           88 AAGKAVLCEK   97 (334)
T ss_dssp             HTTCEEEEES
T ss_pred             hcCCEEEEEC
Confidence            9999999864

>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}

Probab=85.67  E-value=1  Score=34.63  Aligned_cols=79  Identities=14%  Similarity=-0.025  Sum_probs=49.9

Q ss_pred             HHHhhCCCcEEEE-eecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhh----ccccEEEcCCC-CCCchHHHHH
Q psy15363          5 FVLKAVPNSILWL-LKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG----QLADVCLDTPL-CNGHTTSMDV   78 (130)
Q Consensus         5 ~il~~~P~a~l~i-~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~----~~~Dv~l~~~~-~~~g~~~lEA   78 (130)
                      ..+...|+..++- +.+  ...++.++.++++|+...++    +.+.++++.--    ...|+++-..| ....-.+.+|
T Consensus        32 ~~~~~~~~~~lva~v~d--~~~~~a~~~a~~~g~~~~~~----~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~a  105 (398)
T 3dty_A           32 CAALRDNTFVLVAGAFD--IDPIRGSAFGEQLGVDSERC----YADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAA  105 (398)
T ss_dssp             HHHHGGGSEEEEEEECC--SSHHHHHHHHHHTTCCGGGB----CSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHH
T ss_pred             HHHhhCCCeEEEEEEeC--CCHHHHHHHHHHhCCCccee----eCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHH
Confidence            4455667777764 443  34567778888888852122    23455654421    13898854444 4456678999


Q ss_pred             HhcCCcEEecC
Q psy15363         79 LWTGTPVVTLP   89 (130)
Q Consensus        79 la~G~PvV~~~   89 (130)
                      +..|++|++-+
T Consensus       106 l~aGkhVl~EK  116 (398)
T 3dty_A          106 LEAGLHVVCEK  116 (398)
T ss_dssp             HHTTCEEEECS
T ss_pred             HHCCCeEEEeC
Confidence            99999999953

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=85.36  E-value=2.2  Score=32.10  Aligned_cols=77  Identities=12%  Similarity=-0.006  Sum_probs=50.9

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      +.+.+.+.|+..++-+.+  ...++.+++++++|+.  .  +   .+.+++..- ..+|+++-+.|. ...-.+.+|+..
T Consensus        43 ~~~~l~~~~~~~l~av~d--~~~~~~~~~a~~~g~~--~--~---~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~a  112 (350)
T 3rc1_A           43 ALPALEAEPLTEVTAIAS--RRWDRAKRFTERFGGE--P--V---EGYPALLER-DDVDAVYVPLPAVLHAEWIDRALRA  112 (350)
T ss_dssp             HHHHHHHCTTEEEEEEEE--SSHHHHHHHHHHHCSE--E--E---ESHHHHHTC-TTCSEEEECCCGGGHHHHHHHHHHT
T ss_pred             HHHHHHhCCCeEEEEEEc--CCHHHHHHHHHHcCCC--C--c---CCHHHHhcC-CCCCEEEECCCcHHHHHHHHHHHHC
Confidence            345667788888876664  3456677778888873  1  1   234554321 258998665554 345668899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus       113 Gk~Vl~EK  120 (350)
T 3rc1_A          113 GKHVLAEK  120 (350)
T ss_dssp             TCEEEEES
T ss_pred             CCcEEEeC
Confidence            99999854

>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B

Probab=85.34  E-value=0.37  Score=35.60  Aligned_cols=75  Identities=12%  Similarity=0.072  Sum_probs=48.4

Q ss_pred             cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe-cCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         13 SILWLLKFPAVGEANIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        13 a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~-g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      ..++++|.....+..+++.+++-|...-.=+|+ |.++.... ..++.=|+.+-+-|..-...+.||...|+|||++
T Consensus        71 ~~vlfVgTk~~~q~~V~k~A~~~g~~~v~~rwlgGtLTN~~t-~~f~~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial  146 (252)
T 3u5c_A           71 EDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT-RSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIAL  146 (252)
T ss_dssp             GGEEEEECSHHHHHHHHHHHHHSSCEEEESCCCTTSSSCTTS-TTCCCCSEEEESCTTTTHHHHHHHHTTTCCEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHhCCceecCcccCCcccChhh-hhccCCceEEEeCCccchHHHHHHHHcCCCEEEE
Confidence            556788865445667777788777421111234 33332211 3467778886666666678899999999999976

>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}

Probab=85.11  E-value=1.7  Score=27.73  Aligned_cols=77  Identities=16%  Similarity=0.103  Sum_probs=47.5

Q ss_pred             CCcEEEEeecCccc----HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhc--CCc
Q psy15363         11 PNSILWLLKFPAVG----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT--GTP   84 (130)
Q Consensus        11 P~a~l~i~g~~~~~----~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~--G~P   84 (130)
                      +.-++++++..|..    -..+++.++++|++   +.... .+..++...+...|++|-......-..-++..+-  |+|
T Consensus         5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~---v~i~a-~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ip   80 (108)
T 3nbm_A            5 KELKVLVLCAGSGTSAQLANAINEGANLTEVR---VIANS-GAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQ   80 (108)
T ss_dssp             CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS---EEEEE-EETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCE
T ss_pred             cCceEEEECCCCCCHHHHHHHHHHHHHHCCCc---eEEEE-cchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCc
Confidence            45667777754432    35788889999985   33322 1112233445678999865544444555666654  899


Q ss_pred             EEecCCC
Q psy15363         85 VVTLPGE   91 (130)
Q Consensus        85 vV~~~g~   91 (130)
                      |.+.+..
T Consensus        81 V~vI~~~   87 (108)
T 3nbm_A           81 IVATRGM   87 (108)
T ss_dssp             EEECCHH
T ss_pred             EEEeCHH
Confidence            9998754

>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=85.10  E-value=0.52  Score=35.68  Aligned_cols=75  Identities=9%  Similarity=0.000  Sum_probs=47.9

Q ss_pred             cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe-cCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEec
Q psy15363         13 SILWLLKFPAVGEANIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL   88 (130)
Q Consensus        13 a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~-g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~   88 (130)
                      ..++++|+....+..+++.+++-|...-.=+|+ |.++... ...++.=|+.+-+-|..-...+.||...|+|||++
T Consensus        76 ~~ILfVgTk~~aq~aV~k~A~~tG~~yV~~RWlgGtLTN~~-t~~f~ePdllvV~Dp~~d~qAI~EA~~lnIPtIAL  151 (305)
T 3iz6_A           76 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQL-QTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAF  151 (305)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHHTCEEECSCCCTTTTTTTT-TSCSSCCSEEEESCTTTTHHHHHHHHHHTCCEEEE
T ss_pred             CeEEEEeCcHHHHHHHHHHHHHhCCccccCcccCCcccCcc-cccccCCceeEEeCcccchHHHHHHHHcCCCEEEE
Confidence            456678865445666777777766431122344 3333221 12356778876666666678899999999999976

>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*

Probab=84.62  E-value=2.5  Score=32.92  Aligned_cols=79  Identities=11%  Similarity=0.015  Sum_probs=51.0

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--cccEEEcCCCC-CCchHHHHHHh
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTPLC-NGHTTSMDVLW   80 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--~~Dv~l~~~~~-~~g~~~lEAla   80 (130)
                      .+.+.+.|+..++-+.+  ...+..+++++++|+....+...  .+.++   ++.  .+|+++...|. ...-.+.+|+.
T Consensus       100 ~~~l~~~~~~~lvav~d--~~~~~~~~~a~~~g~~~~~~~~~--~~~~~---ll~~~~vD~V~iatp~~~h~~~~~~al~  172 (433)
T 1h6d_A          100 LPGFAGCQHSRIEALVS--GNAEKAKIVAAEYGVDPRKIYDY--SNFDK---IAKDPKIDAVYIILPNSLHAEFAIRAFK  172 (433)
T ss_dssp             HHHTTTCSSEEEEEEEC--SCHHHHHHHHHHTTCCGGGEECS--SSGGG---GGGCTTCCEEEECSCGGGHHHHHHHHHH
T ss_pred             HHHHhhCCCcEEEEEEc--CCHHHHHHHHHHhCCCccccccc--CCHHH---HhcCCCCCEEEEcCCchhHHHHHHHHHH
Confidence            44556678888877764  34556777788888742123322  22333   444  58998766554 44567889999


Q ss_pred             cCCcEEecC
Q psy15363         81 TGTPVVTLP   89 (130)
Q Consensus        81 ~G~PvV~~~   89 (130)
                      .|++|++-+
T Consensus       173 aGk~Vl~EK  181 (433)
T 1h6d_A          173 AGKHVMCEK  181 (433)
T ss_dssp             TTCEEEECS
T ss_pred             CCCcEEEcC
Confidence            999999854

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=84.31  E-value=3.6  Score=30.80  Aligned_cols=76  Identities=18%  Similarity=0.097  Sum_probs=48.4

Q ss_pred             HHHHhhC-CCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          4 IFVLKAV-PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         4 ~~il~~~-P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      .+.+.+. |+..++-+.+  ...++.++.++++|+.       ...+.+++..- ..+|+++-..|. ...-.+.+|+..
T Consensus        29 ~~~l~~~~~~~~lvav~d--~~~~~~~~~~~~~~~~-------~~~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~~   98 (354)
T 3q2i_A           29 FGALEKHADRAELIDVCD--IDPAALKAAVERTGAR-------GHASLTDMLAQ-TDADIVILTTPSGLHPTQSIECSEA   98 (354)
T ss_dssp             HHHHHHTTTTEEEEEEEC--SSHHHHHHHHHHHCCE-------EESCHHHHHHH-CCCSEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHhCCCCeEEEEEEc--CCHHHHHHHHHHcCCc-------eeCCHHHHhcC-CCCCEEEECCCcHHHHHHHHHHHHC
Confidence            3455566 7888776664  3455667777777741       12344554331 368988655543 345568899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        99 gk~v~~EK  106 (354)
T 3q2i_A           99 GFHVMTEK  106 (354)
T ss_dssp             TCEEEECS
T ss_pred             CCCEEEeC
Confidence            99999854

>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1

Probab=83.82  E-value=5.9  Score=24.66  Aligned_cols=110  Identities=11%  Similarity=0.044  Sum_probs=66.0

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc------------cccEEE-cCC-CCCCchHHHH
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ------------LADVCL-DTP-LCNGHTTSMD   77 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~------------~~Dv~l-~~~-~~~~g~~~lE   77 (130)
                      ..+++++.+.......+++.+++.|.. ..|......  ++....+.            ..|+.+ |.. +...|..+++
T Consensus         6 ~~~iLivdd~~~~~~~l~~~L~~~g~~-~~v~~~~~~--~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~   82 (149)
T 1k66_A            6 TQPLLVVEDSDEDFSTFQRLLQREGVV-NPIYRCITG--DQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQ   82 (149)
T ss_dssp             TSCEEEECCCHHHHHHHHHHHHHTTBC-SCEEEECSH--HHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHH
T ss_pred             CccEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCH--HHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHH
Confidence            356777876444567888888988863 456554433  44444443            468884 543 4456777788


Q ss_pred             HHh-----cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhc
Q psy15363         78 VLW-----TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG  126 (130)
Q Consensus        78 Ala-----~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~  126 (130)
                      .+.     ..+|+|.+.+..-.....  -....|..+++..  +.+++.+...++.
T Consensus        83 ~l~~~~~~~~~~ii~~t~~~~~~~~~--~~~~~g~~~~l~kP~~~~~l~~~i~~~~  136 (149)
T 1k66_A           83 EIKQDEVLKKIPVVIMTTSSNPKDIE--ICYSYSISSYIVKPLEIDRLTETVQTFI  136 (149)
T ss_dssp             HHTTSTTGGGSCEEEEESCCCHHHHH--HHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred             HHHhCcccCCCeEEEEeCCCCHHHHH--HHHHCCCCEEEeCCCCHHHHHHHHHHHH
Confidence            776     468988876543322222  1224588887653  6666666555443

>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A

Probab=83.77  E-value=6.3  Score=24.97  Aligned_cols=109  Identities=13%  Similarity=0.130  Sum_probs=63.4

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc---------cccEE-EcC-CCCCCchHHHHHHh
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---------LADVC-LDT-PLCNGHTTSMDVLW   80 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~---------~~Dv~-l~~-~~~~~g~~~lEAla   80 (130)
                      ..+++++.+....+..+++.+++.|.. ..|...  .+..+....+.         ..|+. +|- .|...|..+++.+.
T Consensus         8 ~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~--~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~   84 (149)
T 1i3c_A            8 PKVILLVEDSKADSRLVQEVLKTSTID-HELIIL--RDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIK   84 (149)
T ss_dssp             CEEEEEECCCHHHHHHHHHHHHSCCSC-EEEEEE--CSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred             CCeEEEEECCHHHHHHHHHHHHhcCCC-ccEEEe--CCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence            457778876433566788888876642 234333  33455555554         47888 454 35556777887775


Q ss_pred             -----cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHh
Q psy15363         81 -----TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL  125 (130)
Q Consensus        81 -----~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l  125 (130)
                           ..+|||.+.+..-..... ..+ ..|..+++..  +.+++.+...++
T Consensus        85 ~~~~~~~~piiils~~~~~~~~~-~~~-~~ga~~~l~KP~~~~~L~~~i~~~  134 (149)
T 1i3c_A           85 QNPDLKRIPVVVLTTSHNEDDVI-ASY-ELHVNCYLTKSRNLKDLFKMVQGI  134 (149)
T ss_dssp             HCTTTTTSCEEEEESCCCHHHHH-HHH-HTTCSEEEECCSSHHHHHHHHHHH
T ss_pred             hCcCcCCCeEEEEECCCChHHHH-HHH-HcCCcEEEECCCCHHHHHHHHHHH
Confidence                 357988776543322222 122 4588887653  566766655443

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=83.58  E-value=3.4  Score=30.53  Aligned_cols=76  Identities=14%  Similarity=0.039  Sum_probs=49.0

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCC-CchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCN-GHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~-~g~~~lEAla~   81 (130)
                      ..+.+.+.|+..++ +.+  ...+..+++++++|+. . + +   .+..+.+  -..+|+++-..|.. ....+.+|+..
T Consensus        18 ~~~~l~~~~~~~l~-v~d--~~~~~~~~~a~~~g~~-~-~-~---~~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~   86 (323)
T 1xea_A           18 YLPVLAQWPDIELV-LCT--RNPKVLGTLATRYRVS-A-T-C---TDYRDVL--QYGVDAVMIHAATDVHSTLAAFFLHL   86 (323)
T ss_dssp             HHHHHTTSTTEEEE-EEC--SCHHHHHHHHHHTTCC-C-C-C---SSTTGGG--GGCCSEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHHhCCCceEE-EEe--CCHHHHHHHHHHcCCC-c-c-c---cCHHHHh--hcCCCEEEEECCchhHHHHHHHHHHC
Confidence            34556677889988 664  3456677788888874 1 1 1   1222221  25789997665543 45566789999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus        87 Gk~V~~EK   94 (323)
T 1xea_A           87 GIPTFVDK   94 (323)
T ss_dssp             TCCEEEES
T ss_pred             CCeEEEeC
Confidence            99999753

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=83.55  E-value=1.4  Score=33.13  Aligned_cols=69  Identities=14%  Similarity=0.016  Sum_probs=46.5

Q ss_pred             cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC-CCCCchHHHHHHhcCCcEEecCC
Q psy15363         13 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        13 a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      ++++-+.+  ...++.++.++++|+.  ++    +.+.+++++- ...|+++-+. +....-.+.+|+.+|++|++-+-
T Consensus        38 ~~l~av~d--~~~~~a~~~a~~~g~~--~~----~~d~~~ll~~-~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKP  107 (390)
T 4h3v_A           38 PDLNVLCG--RDAEAVRAAAGKLGWS--TT----ETDWRTLLER-DDVQLVDVCTPGDSHAEIAIAALEAGKHVLCEKP  107 (390)
T ss_dssp             EEEEEEEC--SSHHHHHHHHHHHTCS--EE----ESCHHHHTTC-TTCSEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred             ceEEEEEc--CCHHHHHHHHHHcCCC--cc----cCCHHHHhcC-CCCCEEEEeCChHHHHHHHHHHHHcCCCceeecC
Confidence            47777775  4567788889999974  22    2344554321 2478885444 44556779999999999998653

>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0

Probab=83.51  E-value=4.8  Score=27.32  Aligned_cols=60  Identities=17%  Similarity=0.173  Sum_probs=41.7

Q ss_pred             HHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccc----c-EEEcCCCCC-CchHHHHHHh----cCCcEEec
Q psy15363         26 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA----D-VCLDTPLCN-GHTTSMDVLW----TGTPVVTL   88 (130)
Q Consensus        26 ~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~----D-v~l~~~~~~-~g~~~lEAla----~G~PvV~~   88 (130)
                      +.+++.+.++|+   .+.|.-.=...++..+++.+    | |.++|--|+ .+..+.+|++    .++|+|=.
T Consensus        36 ~~l~~~a~~~g~---~v~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~l~~~~~P~VEV  105 (151)
T 3u80_A           36 KLCAEWGKDLGL---EVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEV  105 (151)
T ss_dssp             HHHHHHHHHTTE---EEEEEECSCHHHHHHHHHHHHHHTCCEEEECTTCCSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred             HHHHHHHHHcCC---EEEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHHHhhcCCCEEEE
Confidence            456666777776   36666655566777766653    4 568888777 5788999944    59999854

>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1

Probab=83.43  E-value=0.97  Score=34.21  Aligned_cols=83  Identities=10%  Similarity=-0.020  Sum_probs=51.0

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecC------------CCHHHHHHhhccccEEEcCCCC
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNV------------AAKEEHVRRGQLADVCLDTPLC   69 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~------------~~~~~~~~~~~~~Dv~l~~~~~   69 (130)
                      .+.+.+.+.|+..++.+.+..  .+....++++.|++ -.-.|.+.            -+.+++   +..+|+.+.+.|.
T Consensus        16 ~~~r~l~~~~~~elvav~d~~--~~~~~~~~~~~g~~-~~~~~~~~v~~~~~~~~~v~~d~~~l---~~~vDvV~~aTp~   89 (334)
T 2czc_A           16 RVAYAVTKQDDMELIGITKTK--PDFEAYRAKELGIP-VYAASEEFIPRFEKEGFEVAGTLNDL---LEKVDIIVDATPG   89 (334)
T ss_dssp             HHHHHHHTCTTEEEEEEEESS--CSHHHHHHHHTTCC-EEESSGGGHHHHHHHTCCCSCBHHHH---HTTCSEEEECCST
T ss_pred             HHHHHHhcCCCCEEEEEEcCC--HHHHHHHHHhcCcc-ccccccccceeccCCceEEcCcHHHh---ccCCCEEEECCCc
Confidence            356777888999988887532  23455667777653 11111111            123343   3589999887775


Q ss_pred             CC-chHHHHHHhcCCcEEecCC
Q psy15363         70 NG-HTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        70 ~~-g~~~lEAla~G~PvV~~~g   90 (130)
                      +. -.....++..|++||+...
T Consensus        90 ~~h~~~a~~~l~aGk~Vi~sap  111 (334)
T 2czc_A           90 GIGAKNKPLYEKAGVKAIFQGG  111 (334)
T ss_dssp             THHHHHHHHHHHHTCEEEECTT
T ss_pred             cccHHHHHHHHHcCCceEeecc
Confidence            43 3445678889999997643

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=82.97  E-value=3.5  Score=30.72  Aligned_cols=75  Identities=17%  Similarity=-0.003  Sum_probs=49.6

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--cccEEEcCCCC-CCchHHHHHH
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTPLC-NGHTTSMDVL   79 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--~~Dv~l~~~~~-~~g~~~lEAl   79 (130)
                      +.+.+.+.|+..++-+.+  ...+..+++++++|.   +  .  ..+.++   ++.  .+|+++...|. ...-.+.+|+
T Consensus        19 ~~~~l~~~~~~~l~av~d--~~~~~~~~~a~~~g~---~--~--~~~~~~---~l~~~~~D~V~i~tp~~~h~~~~~~al   86 (344)
T 3euw_A           19 HAANIAANPDLELVVIAD--PFIEGAQRLAEANGA---E--A--VASPDE---VFARDDIDGIVIGSPTSTHVDLITRAV   86 (344)
T ss_dssp             HHHHHHHCTTEEEEEEEC--SSHHHHHHHHHTTTC---E--E--ESSHHH---HTTCSCCCEEEECSCGGGHHHHHHHHH
T ss_pred             HHHHHHhCCCcEEEEEEC--CCHHHHHHHHHHcCC---c--e--eCCHHH---HhcCCCCCEEEEeCCchhhHHHHHHHH
Confidence            455667788888876664  345666777777663   1  1  123344   455  68988665554 4456688999


Q ss_pred             hcCCcEEecC
Q psy15363         80 WTGTPVVTLP   89 (130)
Q Consensus        80 a~G~PvV~~~   89 (130)
                      ..|++|++-+
T Consensus        87 ~~gk~v~~EK   96 (344)
T 3euw_A           87 ERGIPALCEK   96 (344)
T ss_dssp             HTTCCEEECS
T ss_pred             HcCCcEEEEC
Confidence            9999999864

>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: d.79.7.1 PDB: 2w8b_C 1oap_A

Probab=82.60  E-value=3.5  Score=26.29  Aligned_cols=65  Identities=11%  Similarity=0.075  Sum_probs=42.5

Q ss_pred             HHHHHhhCCCcEEEEeecCcc---c----------HHHHHHHHHHcCCCCCCEEEecCCCH--------HHHHHhhcccc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV---G----------EANIQATAQALGLDQHRILFSNVAAK--------EEHVRRGQLAD   61 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~---~----------~~~l~~~~~~~g~~~~rv~f~g~~~~--------~~~~~~~~~~D   61 (130)
                      ++++++..|+..+.|.|....   .          -+.+++++.+.|++++|+...|.-..        ++-.+.=+.++
T Consensus        28 ia~~l~~~p~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~G~~~P~~~n~t~~~r~~NRRVe  107 (118)
T 2hqs_H           28 HANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAV  107 (118)
T ss_dssp             HHHHHHHCTTCCEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECTTSSCSSCCSSHHHHHHHSEEE
T ss_pred             HHHHHHhCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEecCCCcCCCCcCHHHHHhCCcEE
Confidence            567889999999999995321   1          12566777788999889988776421        22233446677


Q ss_pred             EEEcCC
Q psy15363         62 VCLDTP   67 (130)
Q Consensus        62 v~l~~~   67 (130)
                      |.+.|.
T Consensus       108 i~i~~~  113 (118)
T 2hqs_H          108 LVYLEH  113 (118)
T ss_dssp             EECC--
T ss_pred             EEEecC
Confidence            777554

>2aiz_P Outer membrane protein P6; alpha-beta sandwich; HET: UDP AMU DGL 6CL DAL; NMR {Haemophilus influenzae} SCOP: d.79.7.1

Probab=82.56  E-value=2.9  Score=27.38  Aligned_cols=47  Identities=11%  Similarity=0.089  Sum_probs=34.8

Q ss_pred             hHHHHHhhCCCcEEEEeecCcc---c----------HHHHHHHHHHcCCCCCCEEEecCC
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAV---G----------EANIQATAQALGLDQHRILFSNVA   48 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~---~----------~~~l~~~~~~~g~~~~rv~f~g~~   48 (130)
                      .++++++.+|+.++.|.|+...   .          -+.+++++.+.|++++||...|+-
T Consensus        51 ~ia~~L~~~p~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~G  110 (134)
T 2aiz_P           51 AHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYG  110 (134)
T ss_dssp             HHHHHHHHSTTCCEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECT
T ss_pred             HHHHHHHHCCCceEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEC
Confidence            3677889999999999996321   1          125667777889998899988764

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=81.79  E-value=2.6  Score=31.80  Aligned_cols=78  Identities=10%  Similarity=-0.005  Sum_probs=49.0

Q ss_pred             HHHHh-hCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhc
Q psy15363          4 IFVLK-AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWT   81 (130)
Q Consensus         4 ~~il~-~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~   81 (130)
                      .+.+. +.|+..++-+.+.  ..+..++.++++|+. .++    ..+.++++.- ..+|+++-..|. ...-.+.+|+..
T Consensus        39 ~~~l~~~~~~~~lvav~d~--~~~~~~~~a~~~g~~-~~~----~~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~a  110 (357)
T 3ec7_A           39 LRRLANTVSGVEVVAVCDI--VAGRAQAALDKYAIE-AKD----YNDYHDLIND-KDVEVVIITASNEAHADVAVAALNA  110 (357)
T ss_dssp             HHHHHHTCTTEEEEEEECS--STTHHHHHHHHHTCC-CEE----ESSHHHHHHC-TTCCEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHhhCCCcEEEEEEeC--CHHHHHHHHHHhCCC-Cee----eCCHHHHhcC-CCCCEEEEcCCcHHHHHHHHHHHHC
Confidence            44455 6788888766642  334567777787752 111    1334554331 248998655553 445678899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |++|++-+
T Consensus       111 Gk~Vl~EK  118 (357)
T 3ec7_A          111 NKYVFCEK  118 (357)
T ss_dssp             TCEEEEES
T ss_pred             CCCEEeec
Confidence            99999864

>2kgw_A Outer membrane protein A; OMPA-L membrane, transmembrane; NMR {Mycobacterium tuberculosis} PDB: 2lca_A 2lbt_A

Probab=81.66  E-value=3.3  Score=26.72  Aligned_cols=46  Identities=15%  Similarity=0.096  Sum_probs=34.1

Q ss_pred             HHHHHhhCCCcEEEEeecCcc---c---------H-HHHHHHHHHcCCCCCCEEEecCC
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV---G---------E-ANIQATAQALGLDQHRILFSNVA   48 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~---~---------~-~~l~~~~~~~g~~~~rv~f~g~~   48 (130)
                      ++.+++.+|+.++.|.|+...   .         + +.+++++.+.|++.+||...|+-
T Consensus        46 ia~~l~~~~~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~G  104 (129)
T 2kgw_A           46 VADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLG  104 (129)
T ss_dssp             HHHHHHTCTTSCEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEECT
T ss_pred             HHHHHHhCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEc
Confidence            577889999999999996421   1         1 25667777789998899987764

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=81.62  E-value=5  Score=29.74  Aligned_cols=76  Identities=9%  Similarity=0.073  Sum_probs=47.6

Q ss_pred             HHHHh-hCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCC-CchHHHHHHhc
Q psy15363          4 IFVLK-AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCN-GHTTSMDVLWT   81 (130)
Q Consensus         4 ~~il~-~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~-~g~~~lEAla~   81 (130)
                      .+.+. +.|+.+++.+.+  ...++.++.++++|+.  ++ +   .+.+++..- ..+|+++...|.. ....+.+|+..
T Consensus        24 ~~~l~~~~~~~~~vav~d--~~~~~~~~~a~~~g~~--~~-~---~~~~~~l~~-~~~D~V~i~tp~~~h~~~~~~al~~   94 (346)
T 3cea_A           24 ARHLVNKIQGVKLVAACA--LDSNQLEWAKNELGVE--TT-Y---TNYKDMIDT-ENIDAIFIVAPTPFHPEMTIYAMNA   94 (346)
T ss_dssp             HHHHHHTCSSEEEEEEEC--SCHHHHHHHHHTTCCS--EE-E---SCHHHHHTT-SCCSEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHhcCCCcEEEEEec--CCHHHHHHHHHHhCCC--cc-c---CCHHHHhcC-CCCCEEEEeCChHhHHHHHHHHHHC
Confidence            34455 678888776664  3445666777777763  21 1   233444221 2589997666543 45667889999


Q ss_pred             CCcEEec
Q psy15363         82 GTPVVTL   88 (130)
Q Consensus        82 G~PvV~~   88 (130)
                      |++|++-
T Consensus        95 G~~v~~e  101 (346)
T 3cea_A           95 GLNVFCE  101 (346)
T ss_dssp             TCEEEEC
T ss_pred             CCEEEEc
Confidence            9999985

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=81.19  E-value=5.6  Score=29.25  Aligned_cols=74  Identities=14%  Similarity=0.058  Sum_probs=46.7

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCC-CchHHHHHHhcC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCN-GHTTSMDVLWTG   82 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~-~g~~~lEAla~G   82 (130)
                      .+.+.+.|+..++.+.+..+  +..+++++++|+.     +  .-+.+++   -..+|+++.+.|.. ..-.+.+|+..|
T Consensus        22 ~~~l~~~~~~~lvav~d~~~--~~~~~~~~~~g~~-----~--~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G   89 (319)
T 1tlt_A           22 LPVLAAASDWTLQGAWSPTR--AKALPICESWRIP-----Y--ADSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAG   89 (319)
T ss_dssp             HHHHHSCSSEEEEEEECSSC--TTHHHHHHHHTCC-----B--CSSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTT
T ss_pred             HHHHHhCCCeEEEEEECCCH--HHHHHHHHHcCCC-----c--cCcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcC
Confidence            34556678888875554222  3355666677763     1  2233444   35799997666543 456678899999


Q ss_pred             CcEEecC
Q psy15363         83 TPVVTLP   89 (130)
Q Consensus        83 ~PvV~~~   89 (130)
                      ++|++-+
T Consensus        90 ~~v~~eK   96 (319)
T 1tlt_A           90 VHVCVDK   96 (319)
T ss_dssp             CEEEEES
T ss_pred             CeEEEeC
Confidence            9999853

>3td3_A Outer membrane protein OMP38; OMPA-like fold, cell-WALL attachment, peptidoglycan-binding, protein,peptide binding protein; 1.59A {Acinetobacter baumannii} PDB: 3td4_A* 3td5_A*

Probab=81.08  E-value=5.1  Score=25.49  Aligned_cols=46  Identities=13%  Similarity=0.119  Sum_probs=33.7

Q ss_pred             HHHHHhhCCCcEEEEeecCcc---cH----------HHHHHHHHH-cCCCCCCEEEecCC
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV---GE----------ANIQATAQA-LGLDQHRILFSNVA   48 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~---~~----------~~l~~~~~~-~g~~~~rv~f~g~~   48 (130)
                      ++.+++.+|+.++.|.|+...   ..          ..+++++.+ +|++++|+...|.-
T Consensus        36 ~a~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~aV~~~L~~~~Gi~~~ri~~~g~G   95 (123)
T 3td3_A           36 VAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFA   95 (123)
T ss_dssp             HHHHHHHSTTCEEEEEECCCSCSCHHHHHHHHHHHHHHHHHHHHHHSCCCGGGEEEEECT
T ss_pred             HHHHHHhCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCHHHEEEEEEC
Confidence            567889999999999996321   11          246666665 79998899988753

>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}

Probab=80.85  E-value=7.8  Score=24.03  Aligned_cols=107  Identities=10%  Similarity=0.014  Sum_probs=64.5

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--------cccEE-EcCC-CCCCchHHHHHHh-
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--------LADVC-LDTP-LCNGHTTSMDVLW-   80 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--------~~Dv~-l~~~-~~~~g~~~lEAla-   80 (130)
                      ..+++++.+.......+++.+++.|.. ..|.....  .++....+.        ..|+. +|.. +...|..+++.+. 
T Consensus         7 ~~~ILivdd~~~~~~~l~~~L~~~g~~-~~v~~~~~--~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~   83 (143)
T 2qvg_A            7 KVDILYLEDDEVDIQSVERVFHKISSL-IKIEIAKS--GNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRD   83 (143)
T ss_dssp             CCSEEEECCCHHHHHHHHHHHHHHCTT-CCEEEESS--HHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTT
T ss_pred             CCeEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEECC--HHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHc
Confidence            356777776444567888888888864 45665543  345545443        47888 4543 4456777788775 


Q ss_pred             ----cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHH
Q psy15363         81 ----TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAI  123 (130)
Q Consensus        81 ----~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~  123 (130)
                          ..+|+|.+.+..-.....  -....|..+++..  +.+++.+...
T Consensus        84 ~~~~~~~~ii~ls~~~~~~~~~--~~~~~g~~~~l~kP~~~~~L~~~~~  130 (143)
T 2qvg_A           84 DSSFTDIEVFVLTAAYTSKDKL--AFESLNIRGHLIKPLDYGEAIKLFW  130 (143)
T ss_dssp             SGGGTTCEEEEEESCCCHHHHH--HHTTTTCCEEEESSCCHHHHHHHHH
T ss_pred             CccccCCcEEEEeCCCCHHHHH--HHHhcCCCeEEECCCCHHHHHHHHH
Confidence                568988876543222111  2224577777653  5666666543

>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1

Probab=80.70  E-value=5.5  Score=28.02  Aligned_cols=69  Identities=25%  Similarity=0.150  Sum_probs=41.6

Q ss_pred             HHhhccccEEEcCCCCCCch--HHHHHHhcCCcEEecCCCch-hhhhHHHHHHhcC-------CCC-ceecCHHHHHHHH
Q psy15363         54 VRRGQLADVCLDTPLCNGHT--TSMDVLWTGTPVVTLPGETL-ASRVAASQLATLG-------CPE-LIARTHKEYQDIA  122 (130)
Q Consensus        54 ~~~~~~~Dv~l~~~~~~~g~--~~lEAla~G~PvV~~~g~~~-~~r~~~~~l~~~g-------~~~-~va~~~~~y~~~a  122 (130)
                      ..+...+|.|+- .|-+.|+  .+.||+..|+||+.+++..+ ...+ ..++. .|       .+. .+++|+++.++..
T Consensus       113 ~~m~~~sda~Iv-lpGG~GTL~E~~eal~~~kPV~lln~~g~w~~~l-~~~~~-~G~fi~~~~~~~i~~~~~~ee~~~~l  189 (195)
T 1rcu_A          113 FVLLRNADVVVS-IGGEIGTAIEILGAYALGKPVILLRGTGGWTDRI-SQVLI-DGKYLDNRRIVEIHQAWTVEEAVQII  189 (195)
T ss_dssp             HHHHTTCSEEEE-ESCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHG-GGGCB-TTTBSSTTCCSCEEEESSHHHHHHHH
T ss_pred             HHHHHhCCEEEE-ecCCCcHHHHHHHHHhcCCCEEEECCCCccHHHH-HHHHH-cCCcCCHHHcCeEEEeCCHHHHHHHH
Confidence            345577898863 2333343  58999999999999976543 2222 11111 12       111 4568999988876


Q ss_pred             HHh
Q psy15363        123 IRL  125 (130)
Q Consensus       123 ~~l  125 (130)
                      .++
T Consensus       190 ~~~  192 (195)
T 1rcu_A          190 EQI  192 (195)
T ss_dssp             HTC
T ss_pred             HHH
Confidence            654

>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*

Probab=80.62  E-value=4.3  Score=27.51  Aligned_cols=37  Identities=19%  Similarity=0.081  Sum_probs=25.2

Q ss_pred             HHhhccccEEEcCCCCCC---chHHHHHHhcCCcEEecCC
Q psy15363         54 VRRGQLADVCLDTPLCNG---HTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        54 ~~~~~~~Dv~l~~~~~~~---g~~~lEAla~G~PvV~~~g   90 (130)
                      .+.++.||+++--.....   +.-+-=|.+.|+||+++..
T Consensus        63 ~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~  102 (152)
T 4fyk_A           63 LNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFR  102 (152)
T ss_dssp             HHHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             HHHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence            567889999975332222   3335558899999999644

>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}

Probab=80.11  E-value=12  Score=27.68  Aligned_cols=81  Identities=15%  Similarity=0.063  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh-cCCcEEecCCCc-h--hhhhHHH
Q psy15363         25 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET-L--ASRVAAS  100 (130)
Q Consensus        25 ~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla-~G~PvV~~~g~~-~--~~r~~~~  100 (130)
                      ...+++.+++.|+.    .+.-..+......+-..+|++==++....-..++++++ .|+||+...|.. -  .-.....
T Consensus        91 l~~l~~~~~~~Gl~----~~te~~d~~~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave  166 (276)
T 1vs1_A           91 LKLLRRAGDEAGLP----VVTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAE  166 (276)
T ss_dssp             HHHHHHHHHHHTCC----EEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCc----EEEecCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHH
Confidence            34667778888886    44444443332222233788832333323344555554 799999998875 1  2223444


Q ss_pred             HHHhcCCCC
Q psy15363        101 QLATLGCPE  109 (130)
Q Consensus       101 ~l~~~g~~~  109 (130)
                      .+...|.++
T Consensus       167 ~i~~~Gn~~  175 (276)
T 1vs1_A          167 YILLEGNWQ  175 (276)
T ss_dssp             HHHHTTCCC
T ss_pred             HHHHcCCCe
Confidence            456667765

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=80.10  E-value=5.4  Score=29.38  Aligned_cols=76  Identities=16%  Similarity=0.103  Sum_probs=48.1

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCC-CCchHHHHHHhcC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-NGHTTSMDVLWTG   82 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~-~~g~~~lEAla~G   82 (130)
                      .+.+.+ |+..++.+.+  ...+..+++++++|+.  ++    ..+.+++..- ..+|+++.+.|. .....+.+|+..|
T Consensus        17 ~~~l~~-~~~~~vav~d--~~~~~~~~~~~~~g~~--~~----~~~~~~~l~~-~~~D~V~i~tp~~~h~~~~~~al~~G   86 (332)
T 2glx_A           17 IGAIRA-TGGEVVSMMS--TSAERGAAYATENGIG--KS----VTSVEELVGD-PDVDAVYVSTTNELHREQTLAAIRAG   86 (332)
T ss_dssp             HHHHHH-TTCEEEEEEC--SCHHHHHHHHHHTTCS--CC----BSCHHHHHTC-TTCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred             hHHhhc-CCCeEEEEEC--CCHHHHHHHHHHcCCC--cc----cCCHHHHhcC-CCCCEEEEeCChhHhHHHHHHHHHCC
Confidence            344555 8888876664  3455667778888863  11    2234444321 248999766554 3456678899999


Q ss_pred             CcEEecC
Q psy15363         83 TPVVTLP   89 (130)
Q Consensus        83 ~PvV~~~   89 (130)
                      ++|++-+
T Consensus        87 k~v~~ek   93 (332)
T 2glx_A           87 KHVLCEK   93 (332)
T ss_dssp             CEEEECS
T ss_pred             CeEEEeC
Confidence            9999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	130
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.66
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	99.64
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	99.49
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.46
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.45
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.06
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	98.13
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	97.99
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	97.98
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	97.8
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	97.57
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	97.53
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	97.46
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	97.43
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	97.35
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	96.87
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	96.2
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	95.52
d1i3ca_	144	Response regulator for cyanobacterial phytochrome	94.09
d1jbea_	128	CheY protein {Escherichia coli [TaxId: 562]}	93.38
d1k68a_	140	Response regulator for cyanobacterial phytochrome	92.75
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.53
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.47
d1k66a_	149	Response regulator for cyanobacterial phytochrome	90.52
d1vi6a_	193	Ribosomal protein S2 {Archaeon Archaeoglobus fulgi	89.88
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	89.78
d1w25a1	139	Response regulator PleD, receiver domain {Caulobac	88.77
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	88.55
d1iiba_	103	Enzyme IIB-cellobiose {Escherichia coli [TaxId: 56	88.12
d1p6qa_	129	CheY protein {Sinorhizobium meliloti, CheY2 [TaxId	87.44
d1p2fa2	120	Response regulator DrrB {Thermotoga maritima [TaxI	87.18
d2aizp1	134	Peptidoglycan-associated lipoprotein, PAL, peripla	86.31
d1zesa1	121	PhoB receiver domain {Escherichia coli [TaxId: 562	86.01
d2hqsc1	106	Peptidoglycan-associated lipoprotein, PAL, peripla	85.29
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	84.47
d1dxya2	131	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	84.06
d1rcua_	170	Hypothetical protein TM1055 {Thermotoga maritima [	83.84
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	82.87
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	82.7
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	82.42
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	81.99
d1kgsa2	122	PhoB receiver domain {Thermotoga maritima [TaxId:	81.39
d1mb3a_	123	Cell division response regulator DivK {Caulobacter	80.3

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.66  E-value=7.5e-16  Score=105.60  Aligned_cols=121  Identities=12%  Similarity=0.143  Sum_probs=92.5

Q ss_pred             hHHHHHhhCCCcEEEEeecCc--ccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPA--VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDV   78 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~--~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEA   78 (130)
                      .+-+++++.|+.+++++|.+.  +..+.+.+.+.+.+ . ++|+|+|+++.+++..+|+.||+++.|+. +++|.+++||
T Consensus        29 ~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~-~-~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea  106 (166)
T d2f9fa1          29 LQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIA-P-DNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEA  106 (166)
T ss_dssp             HHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHS-C-TTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHH
T ss_pred             HHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccc-c-CcEEEeeccccccccccccccccccccccccccccccccc
Confidence            355778889999999999532  23455555556554 2 79999999999999999999999998886 4679999999


Q ss_pred             HhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee-cCHHHHHHHHHHhccCCC
Q psy15363         79 LWTGTPVVTLPGETLASRVAASQLATLGCPELIA-RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        79 la~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va-~~~~~y~~~a~~l~~d~e  130 (130)
                      |+||+|||+.+......     ++ ..+..+++. .|.+++++...++++|++
T Consensus       107 ~~~g~pvi~s~~~~~~e-----~i-~~~~~g~~~~~d~~~~~~~i~~l~~~~~  153 (166)
T d2f9fa1         107 MASGKPVIAVNEGGFKE-----TV-INEKTGYLVNADVNEIIDAMKKVSKNPD  153 (166)
T ss_dssp             HHTTCCEEEESSHHHHH-----HC-CBTTTEEEECSCHHHHHHHHHHHHHCTT
T ss_pred             ccccccceeecCCccee-----ee-cCCcccccCCCCHHHHHHHHHHHHhCHH
Confidence            99999999987543222     11 123445544 689999999999999864

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=6.1e-17  Score=119.63  Aligned_cols=119  Identities=15%  Similarity=0.131  Sum_probs=92.1

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHh
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLW   80 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla   80 (130)
                      +|+++.++.|+..++++|+ ++..+.+++++++++.. ++++|+|..  +++..+|+.+|+++.|+. +++|++++|||+
T Consensus       216 a~~~l~~~~~~~~~~ii~g-~~~~~~~~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma  291 (370)
T d2iw1a1         216 ALASLPESLRHNTLLFVVG-QDKPRKFEALAEKLGVR-SNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAIT  291 (370)
T ss_dssp             HHHTSCHHHHHTEEEEEES-SSCCHHHHHHHHHHTCG-GGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHH
T ss_pred             cccccccccccceeeeccc-ccccccccccccccccc-ccccccccc--cccccccccccccccccccccccceeeeccc
Confidence            3555666778888888885 35556789999999997 999999976  467889999999998875 578999999999


Q ss_pred             cCCcEEecCCCchhhhhHHHHHHhcCCCC-cee--cCHHHHHHHHHHhccCCC
Q psy15363         81 TGTPVVTLPGETLASRVAASQLATLGCPE-LIA--RTHKEYQDIAIRLGTDRD  130 (130)
Q Consensus        81 ~G~PvV~~~g~~~~~r~~~~~l~~~g~~~-~va--~~~~~y~~~a~~l~~d~e  130 (130)
                      ||+|||+++......     ++.. |..+ ++.  .|.+++.+...+|++|++
T Consensus       292 ~G~PvI~s~~~g~~e-----~i~~-~~~G~l~~~~~d~~~la~~i~~ll~d~~  338 (370)
T d2iw1a1         292 AGLPVLTTAVCGYAH-----YIAD-ANCGTVIAEPFSQEQLNEVLRKALTQSP  338 (370)
T ss_dssp             HTCCEEEETTSTTTH-----HHHH-HTCEEEECSSCCHHHHHHHHHHHHHCHH
T ss_pred             CCeeEEEeCCCChHH-----HhcC-CCceEEEcCCCCHHHHHHHHHHHHcCHH
Confidence            999999986543333     2222 3344 454  489999999999998864

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.49  E-value=2.3e-14  Score=111.81  Aligned_cols=119  Identities=14%  Similarity=-0.042  Sum_probs=79.3

Q ss_pred             hHHHHHhhCCCcEEEEeecCcccHH--HHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHH
Q psy15363          2 SDIFVLKAVPNSILWLLKFPAVGEA--NIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDV   78 (130)
Q Consensus         2 ~w~~il~~~P~a~l~i~g~~~~~~~--~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEA   78 (130)
                      ++.++++.  +.+++++|. |+...  .+++...  +.. +++.|.+..+.++...+|+.||+|+.|+. +++|++++||
T Consensus       312 a~~~~~~~--~~~l~~~G~-G~~~~~~~~~~~~~--~~~-~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEA  385 (477)
T d1rzua_         312 AVDEIVSL--GGRLVVLGA-GDVALEGALLAAAS--RHH-GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYA  385 (477)
T ss_dssp             THHHHHHT--TCEEEEEEC-BCHHHHHHHHHHHH--HTT-TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHH
T ss_pred             HHHHHHhh--CCeEEEEec-CCchHHHHHHHHHh--hcC-CeEEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHH
Confidence            56677665  577888885 44332  3334333  444 89999999998888889999999999885 5789999999


Q ss_pred             HhcCCcEEecCCCchhhhhH---HHHHHhcCCCCce-e-cCHHHHHHHHHHhc
Q psy15363         79 LWTGTPVVTLPGETLASRVA---ASQLATLGCPELI-A-RTHKEYQDIAIRLG  126 (130)
Q Consensus        79 la~G~PvV~~~g~~~~~r~~---~~~l~~~g~~~~v-a-~~~~~y~~~a~~l~  126 (130)
                      |+||+|||+++......-+.   .+.+...+..++. . .|.+++.+...+++
T Consensus       386 ma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l  438 (477)
T d1rzua_         386 LRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTV  438 (477)
T ss_dssp             HHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHH
T ss_pred             HHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHH
Confidence            99999999987543332210   0111111233433 2 47777777665444

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.46  E-value=1.2e-13  Score=96.49  Aligned_cols=116  Identities=5%  Similarity=-0.023  Sum_probs=80.2

Q ss_pred             hHHHHH--hhCCCcEEEEeecCcccHHH-HHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHH
Q psy15363          2 SDIFVL--KAVPNSILWLLKFPAVGEAN-IQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMD   77 (130)
Q Consensus         2 ~w~~il--~~~P~a~l~i~g~~~~~~~~-l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lE   77 (130)
                      +|..+.  ...|+.+|+++|.+.+..+. ++.+.+.  .. +.+.+.|.++.+++..+|+.||+++.|+. +++|++++|
T Consensus        54 a~~~l~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~E  130 (196)
T d2bfwa1          54 AIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK--HG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALE  130 (196)
T ss_dssp             HHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHH--CT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHH
T ss_pred             HHHhhhcccCCCCeEEEEEeecccchhhhhhhhhhc--cc-eeEEeeeccccccchhccccccccccccccccccccchh
Confidence            345554  33589999999963222233 3333333  32 67888899999999999999999998875 467999999


Q ss_pred             HHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhcc
Q psy15363         78 VLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT  127 (130)
Q Consensus        78 Ala~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~  127 (130)
                      ||+||+|||+.....+     ..++.  +-.+++.  .|.+++.+...++++
T Consensus       131 am~~G~pvI~~~~~~~-----~e~i~--~~~g~~~~~~~~~~l~~~i~~~l~  175 (196)
T d2bfwa1         131 AMCLGAIPIASAVGGL-----RDIIT--NETGILVKAGDPGELANAILKALE  175 (196)
T ss_dssp             HHHTTCEEEEESCHHH-----HHHCC--TTTCEEECTTCHHHHHHHHHHHHH
T ss_pred             hhhcCceeeecCCCcc-----ceeec--CCceeeECCCCHHHHHHHHHHHHh
Confidence            9999999999764221     12222  2234544  478888888877665

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.45  E-value=3.7e-13  Score=102.00  Aligned_cols=112  Identities=5%  Similarity=-0.015  Sum_probs=80.9

Q ss_pred             hCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhcCCcEEe
Q psy15363          9 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTGTPVVT   87 (130)
Q Consensus         9 ~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G~PvV~   87 (130)
                      ..|+.+|+++|.+.+..+...+.+.+ ... +++.|.+.++.+++..+++.+|+++.|+. +++|++++|||+||+|||+
T Consensus       280 ~~~~~~lvi~G~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~  357 (437)
T d2bisa1         280 EFQEMRFIIIGKGDPELEGWARSLEE-KHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA  357 (437)
T ss_dssp             GGGGEEEEEECCBCHHHHHHHHHHHH-TCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEE
T ss_pred             ccccceeeeecccccccccchhhhcc-ccc-cceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEE
Confidence            45899999999632232333333333 333 78889999999999999999999998875 5789999999999999998


Q ss_pred             cCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhcc-CC
Q psy15363         88 LPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT-DR  129 (130)
Q Consensus        88 ~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~-d~  129 (130)
                      ++-...     ..+++  +-.+++.  .|.+++.+...++++ |+
T Consensus       358 ~~~g~~-----~e~i~--~~~G~~~~~~d~~~la~~i~~ll~~~~  395 (437)
T d2bisa1         358 SAVGGL-----RDIIT--NETGILVKAGDPGELANAILKALELSR  395 (437)
T ss_dssp             ESCTTH-----HHHCC--TTTCEEECTTCHHHHHHHHHHHHTTTT
T ss_pred             eCCCCc-----HHhEE--CCcEEEECCCCHHHHHHHHHHHHhCCH
Confidence            864322     22333  2245544  589999999988876 54

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.06  E-value=1.7e-10  Score=90.30  Aligned_cols=118  Identities=16%  Similarity=0.066  Sum_probs=81.2

Q ss_pred             hHHHHHhhCCC----cEEEEeecCcc-c-------HHHHHHHHH-------HcCCCCCCEEEecCCCHHHHHHhhccccE
Q psy15363          2 SDIFVLKAVPN----SILWLLKFPAV-G-------EANIQATAQ-------ALGLDQHRILFSNVAAKEEHVRRGQLADV   62 (130)
Q Consensus         2 ~w~~il~~~P~----a~l~i~g~~~~-~-------~~~l~~~~~-------~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv   62 (130)
                      +|.++++++|+    ..|+.++.+.. +       +..+.+++.       ..|.. +.+.+.+.++.+++.++|+.||+
T Consensus       275 A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~-~~v~~~~~~~~~~l~a~~~~Adv  353 (456)
T d1uqta_         275 AYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWT-PLYYLNQHFDRKLLMKIFRYSDV  353 (456)
T ss_dssp             HHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBC-SEEEECSCCCHHHHHHHHHHCSE
T ss_pred             HHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCC-ceeeccCCcCHHHHhHHHhhhce
Confidence            68899999996    45666664321 1       112222222       23555 77899999999999999999999


Q ss_pred             EEcCC-CCCCchHHHHHHhcCCc-----EEecCCCchhhhhHHHHHHhcCCCCcee--cCHHHHHHHHHHhccCC
Q psy15363         63 CLDTP-LCNGHTTSMDVLWTGTP-----VVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus        63 ~l~~~-~~~~g~~~lEAla~G~P-----vV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~y~~~a~~l~~d~  129 (130)
                      ++.|+ .++.|++++|||+||+|     +|.+.-.....        .++ ++++.  .|.+++++...++++++
T Consensus       354 ~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~--------~l~-~g~lVnP~d~~~~A~ai~~aL~~~  419 (456)
T d1uqta_         354 GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN--------ELT-SALIVNPYDRDEVAAALDRALTMS  419 (456)
T ss_dssp             EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG--------TCT-TSEEECTTCHHHHHHHHHHHHTCC
T ss_pred             eecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHH--------HhC-CeEEECcCCHHHHHHHHHHHHcCC
Confidence            98876 46789999999999999     66654321111        111 23333  38889988888887765

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.13  E-value=1.8e-05  Score=57.90  Aligned_cols=81  Identities=12%  Similarity=0.066  Sum_probs=56.4

Q ss_pred             CCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee---cCH
Q psy15363         39 QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTH  115 (130)
Q Consensus        39 ~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va---~~~  115 (130)
                      +++|++.+++|..++   +..+|+|+   ..+|.+|+.||+++|+|+|+.+-.. -....+..+...|..-.+.   -+.
T Consensus       285 ~~~v~~~~~~p~~~l---l~~~~~~I---~hgG~~t~~Eal~~GvP~l~~P~~~-DQ~~na~~v~~~G~g~~l~~~~~~~  357 (401)
T d1rrva_         285 RDDCFAIDEVNFQAL---FRRVAAVI---HHGSAGTEHVATRAGVPQLVIPRNT-DQPYFAGRVAALGIGVAHDGPTPTF  357 (401)
T ss_dssp             CTTEEEESSCCHHHH---GGGSSEEE---ECCCHHHHHHHHHHTCCEEECCCSB-THHHHHHHHHHHTSEEECSSSCCCH
T ss_pred             CCCEEEEeccCcHHH---hhhccEEE---ecCCchHHHHHHHhCCCEEEecccc-cHHHHHHHHHHCCCEEEcCcCCCCH
Confidence            378999999997665   56799998   2567799999999999999987532 1333455566667753332   245


Q ss_pred             HHHHHHHHHhc
Q psy15363        116 KEYQDIAIRLG  126 (130)
Q Consensus       116 ~~y~~~a~~l~  126 (130)
                      +++.+...+++
T Consensus       358 ~~L~~ai~~vl  368 (401)
T d1rrva_         358 ESLSAALTTVL  368 (401)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHh
Confidence            66666665555

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=97.99  E-value=3e-05  Score=56.31  Aligned_cols=81  Identities=15%  Similarity=0.061  Sum_probs=55.5

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee---cCHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTHK  116 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va---~~~~  116 (130)
                      ++|++.+++|..++   |..+|+|+   ..+|.+|+.||+++|+|+|..+-.. -....+..+...|..-.+.   -|.+
T Consensus       285 ~nv~~~~~~p~~~~---l~~~~~~V---~hgG~~t~~Eal~~GvP~v~~P~~~-DQ~~na~~l~~~G~g~~l~~~~~~~~  357 (401)
T d1iira_         285 ADCFAIGEVNHQVL---FGRVAAVI---HHGGAGTTHVAARAGAPQILLPQMA-DQPYYAGRVAELGVGVAHDGPIPTFD  357 (401)
T ss_dssp             GGEEECSSCCHHHH---GGGSSEEE---ECCCHHHHHHHHHHTCCEEECCCST-THHHHHHHHHHHTSEEECSSSSCCHH
T ss_pred             CCEEEEeccCHHHH---HhhcCEEE---ecCCchHHHHHHHhCCCEEEccccc-cHHHHHHHHHHCCCEEEcCcCCCCHH
Confidence            67999999986554   56799998   3567899999999999999986321 1333455666667653332   2456


Q ss_pred             HHHHHHHHhcc
Q psy15363        117 EYQDIAIRLGT  127 (130)
Q Consensus       117 ~y~~~a~~l~~  127 (130)
                      +..+...++++
T Consensus       358 ~l~~ai~~~l~  368 (401)
T d1iira_         358 SLSAALATALT  368 (401)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHhC
Confidence            66665555553

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=97.98  E-value=5.2e-06  Score=60.65  Aligned_cols=83  Identities=11%  Similarity=0.087  Sum_probs=58.6

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC--Cc-hhhhhHHHHHHhcCCCCcee---c
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG--ET-LASRVAASQLATLGCPELIA---R  113 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g--~~-~~~r~~~~~l~~~g~~~~va---~  113 (130)
                      ++|.+.+++|..++   +..+|+|+.   .+|.+|++|||++|+|+|+.+-  +. ..++.-+..+...|..-.+.   -
T Consensus       270 ~~v~i~~~~p~~~l---l~~a~~~v~---hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~  343 (391)
T d1pn3a_         270 ADCFVVGEVNLQEL---FGRVAAAIH---HDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVP  343 (391)
T ss_dssp             TTCCEESSCCHHHH---HTTSSCEEE---ESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSC
T ss_pred             CCEEEecccCHHHH---HhhccEEEe---cCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCC
Confidence            68999999986654   568999982   3567899999999999999863  21 12344456666677754442   2


Q ss_pred             CHHHHHHHHHHhccC
Q psy15363        114 THKEYQDIAIRLGTD  128 (130)
Q Consensus       114 ~~~~y~~~a~~l~~d  128 (130)
                      +.+++.+...++++|
T Consensus       344 ~~~~l~~~i~~~l~~  358 (391)
T d1pn3a_         344 TIDSLSAALDTALAP  358 (391)
T ss_dssp             CHHHHHHHHHHHTST
T ss_pred             CHHHHHHHHHHHhCH
Confidence            467777777777654

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.80  E-value=4e-05  Score=56.99  Aligned_cols=84  Identities=12%  Similarity=0.094  Sum_probs=54.6

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC--CchhhhhHHHHHHhcCCCCcee-----
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG--ETLASRVAASQLATLGCPELIA-----  112 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g--~~~~~r~~~~~l~~~g~~~~va-----  112 (130)
                      ++|++.+++|+.++++ ...+++|+   ..+|.+++.||+.+|+|.|+.+-  +.+  ..++-+.+.+|+.-.+.     
T Consensus       334 ~nv~~~~w~Pq~~lL~-hp~~~~fV---tHGG~gS~~EAl~~GvP~v~~P~~~DQ~--~nA~rv~e~lG~Gv~l~~~~~~  407 (471)
T d2vcha1         334 RGFVIPFWAPQAQVLA-HPSTGGFL---THCGWNSTLESVVSGIPLIAWPLYAEQK--MNAVLLSEDIRAALRPRAGDDG  407 (471)
T ss_dssp             TEEEEESCCCHHHHHH-STTEEEEE---ECCCHHHHHHHHHHTCCEEECCCSTTHH--HHHHHHHHTTCCEECCCCCTTS
T ss_pred             CCeeecccCCHHHHhc-CccCCEEE---ecCCccHHHHHHHcCCCEEEcccccccH--HHHHHHHHHheeEEEEecCCCC
Confidence            6799999999988754 35788988   35677899999999999999863  322  12222234444442221     


Q ss_pred             -cCHHHHHHHHHHhccCC
Q psy15363        113 -RTHKEYQDIAIRLGTDR  129 (130)
Q Consensus       113 -~~~~~y~~~a~~l~~d~  129 (130)
                       -+.++..+...++++|+
T Consensus       408 ~~t~~~l~~ai~~vl~~~  425 (471)
T d2vcha1         408 LVRREEVARVVKGLMEGE  425 (471)
T ss_dssp             CCCHHHHHHHHHHHHTST
T ss_pred             cCCHHHHHHHHHHHhCCc
Confidence             14555555555555554

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=0.00016  Score=51.93  Aligned_cols=67  Identities=18%  Similarity=0.185  Sum_probs=46.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCc--hhhhhHHHHHHhcCCCCce
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET--LASRVAASQLATLGCPELI  111 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~--~~~r~~~~~l~~~g~~~~v  111 (130)
                      .++...++.+  ++..++..||+++.   .+|++|+.||+++|+|+|..+-..  -.+..-|..+...|..-.+
T Consensus       231 ~~~~v~~f~~--~~~~lm~~adl~It---~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~  299 (351)
T d1f0ka_         231 PQHKVTEFID--DMAAAYAWADVVVC---RSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKII  299 (351)
T ss_dssp             TTSEEESCCS--CHHHHHHHCSEEEE---CCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEEC
T ss_pred             ccceeeeehh--hHHHHHHhCchhhc---cccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEe
Confidence            4566666653  35567889999982   256699999999999999875221  1233457778888875444

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=97.53  E-value=0.00015  Score=53.89  Aligned_cols=85  Identities=11%  Similarity=0.016  Sum_probs=58.4

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHH-HhcCCCCcee---cCH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL-ATLGCPELIA---RTH  115 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l-~~~g~~~~va---~~~  115 (130)
                      +++.+..++|..+++. ...+|+|+   ..+|..++.||++.|+|+|+.+--.-.- ..+..+ +..|+...+.   -+.
T Consensus       319 ~nv~~~~~~pq~~lL~-hp~~~~fI---tHGG~~s~~eal~~GvP~v~~P~~~DQ~-~na~rv~~~~G~G~~l~~~~~t~  393 (450)
T d2c1xa1         319 GYGMVVPWAPQAEVLA-HEAVGAFV---THCGWNSLWESVAGGVPLICRPFFGDQR-LNGRMVEDVLEIGVRIEGGVFTK  393 (450)
T ss_dssp             TTEEEESCCCHHHHHT-STTEEEEE---ECCCHHHHHHHHHHTCCEEECCCSTTHH-HHHHHHHHTSCCEEECGGGSCCH
T ss_pred             ccccccccCChHhhhc-cCceeEEE---ccCCccHHHHHHHcCCCEEecccccchH-HHHHHHHHHcCcEEEecCCCcCH
Confidence            5788888898777642 46788887   3567789999999999999997432111 223344 4467765443   367


Q ss_pred             HHHHHHHHHhccCC
Q psy15363        116 KEYQDIAIRLGTDR  129 (130)
Q Consensus       116 ~~y~~~a~~l~~d~  129 (130)
                      ++..+...++++|+
T Consensus       394 ~~l~~ai~~vL~d~  407 (450)
T d2c1xa1         394 SGLMSCFDQILSQE  407 (450)
T ss_dssp             HHHHHHHHHHHHSH
T ss_pred             HHHHHHHHHHhcCc
Confidence            77777777777764

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=97.46  E-value=0.00023  Score=52.66  Aligned_cols=86  Identities=10%  Similarity=0.052  Sum_probs=55.1

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee--cCHHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKE  117 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va--~~~~~  117 (130)
                      +||.+..++|..+++ ....+++|+   ..+|.+++.||+..|+|.|+.+--.-.-+.+.-+.+..|+.--+.  -+.++
T Consensus       346 ~Nv~~~~~~Pq~~lL-~hp~~~~fI---tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~  421 (473)
T d2pq6a1         346 DRGLIASWCPQDKVL-NHPSIGGFL---THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREE  421 (473)
T ss_dssp             TTEEEESCCCHHHHH-TSTTEEEEE---ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHH
T ss_pred             CceEEeeeCCHHHHh-cCCcCcEEE---ecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCCCcCHHH
Confidence            588999999987763 235788888   356778999999999999999743222222222334445542222  25566


Q ss_pred             HHHHHHHhccCC
Q psy15363        118 YQDIAIRLGTDR  129 (130)
Q Consensus       118 y~~~a~~l~~d~  129 (130)
                      ..+...++++|+
T Consensus       422 l~~ai~~vl~d~  433 (473)
T d2pq6a1         422 LAKLINEVIAGD  433 (473)
T ss_dssp             HHHHHHHHHTSH
T ss_pred             HHHHHHHHHcCC
Confidence            666666666553

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=97.43  E-value=0.00092  Score=49.91  Aligned_cols=110  Identities=12%  Similarity=0.015  Sum_probs=71.4

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHH-HHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQA-TAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTG   82 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~-~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G   82 (130)
                      ..+.+..++..+++...+.   ...+. ..+...-. +++.+...+++.++..+++.|++++    -++|....||.++|
T Consensus       219 ~~~~~~~~~~~~i~p~~~~---~~~~~~~~~~~~~~-~n~~~~~~l~~~~~l~ll~~s~~vi----gnSssgi~Ea~~lg  290 (373)
T d1v4va_         219 KRVAEAFPHLTFVYPVHLN---PVVREAVFPVLKGV-RNFVLLDPLEYGSMAALMRASLLLV----TDSGGLQEEGAALG  290 (373)
T ss_dssp             HHHHHHCTTSEEEEECCSC---HHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHTEEEEE----ESCHHHHHHHHHTT
T ss_pred             HHHhhhcccceeeeeeccc---ccchhhhhhhhccc-ccceeeccchHHHHHHHhhhceeEe----cccchhhhcchhhc
Confidence            4455666777765544321   11222 22233333 7999999999999999999999998    55667789999999


Q ss_pred             CcEEecCC--CchhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhccC
Q psy15363         83 TPVVTLPG--ETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD  128 (130)
Q Consensus        83 ~PvV~~~g--~~~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~d  128 (130)
                      +|+|+.+.  +...+|.       .|..-++..+.++..+....++.|
T Consensus       291 ~P~Inir~~~eRqeg~~-------~g~nvlv~~d~~~I~~~i~~~l~~  331 (373)
T d1v4va_         291 VPVVVLRNVTERPEGLK-------AGILKLAGTDPEGVYRVVKGLLEN  331 (373)
T ss_dssp             CCEEECSSSCSCHHHHH-------HTSEEECCSCHHHHHHHHHHHHTC
T ss_pred             CcEEEeCCCccCHHHHh-------cCeeEEcCCCHHHHHHHHHHHHcC
Confidence            99998843  2222221       254445556777666666655544

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=97.35  E-value=0.00052  Score=50.55  Aligned_cols=85  Identities=14%  Similarity=0.105  Sum_probs=53.0

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCCCchhhhhHHHHHHhcCCCCcee-------
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA-------  112 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va-------  112 (130)
                      +++.+..+.+..+. ..+..+|+|+   ..+|.+|+.||+++|+|+|+.+--.-.-..++-+.+..|++-.+.       
T Consensus       330 ~n~~v~~~~pq~~~-l~~p~~~~fI---tHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~  405 (461)
T d2acva1         330 GKGMICGWAPQVEV-LAHKAIGGFV---SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGS  405 (461)
T ss_dssp             CSEEEESSCCHHHH-HHSTTEEEEE---ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTC
T ss_pred             CCeEEEecCCHHHH-HhcccCCEEE---ecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccC
Confidence            45566666665544 3567899988   356778999999999999999742212122222335555542221       


Q ss_pred             --cCHHHHHHHHHHhccC
Q psy15363        113 --RTHKEYQDIAIRLGTD  128 (130)
Q Consensus       113 --~~~~~y~~~a~~l~~d  128 (130)
                        -+.++..+...++++|
T Consensus       406 ~~~t~~~l~~a~~~vl~~  423 (461)
T d2acva1         406 DVVAAEEIEKGLKDLMDK  423 (461)
T ss_dssp             CCCCHHHHHHHHHHHTCT
T ss_pred             CccCHHHHHHHHHHHhhC
Confidence              3566777777777653

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=96.87  E-value=0.0039  Score=46.43  Aligned_cols=109  Identities=13%  Similarity=0.068  Sum_probs=64.1

Q ss_pred             HHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCc
Q psy15363          5 FVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTP   84 (130)
Q Consensus         5 ~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~P   84 (130)
                      ..+...++..+++-..+   ...++....+.-...+++.+...+++.++..+++.|++++    -.+|....||-++|+|
T Consensus       224 ~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vI----gnSss~i~Ea~~lg~P  296 (377)
T d1o6ca_         224 RIVGEFEDVQVVYPVHL---NPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFIL----TDSGGVQEEAPSLGKP  296 (377)
T ss_dssp             HHHHHCTTEEEEEC-------CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEE----EC--CHHHHGGGGTCC
T ss_pred             hhccccccccccccccc---ccccchhhhhccccccceEeccccchHHHHHHHhhhheee----cccchhHHhhhhhhce
Confidence            34455566555444322   2233443333322347999999999999999999999998    4455668899999999


Q ss_pred             EEecCCCc--hhhhhHHHHHHhcCCCCceecCHHHHHHHHHHhcc
Q psy15363         85 VVTLPGET--LASRVAASQLATLGCPELIARTHKEYQDIAIRLGT  127 (130)
Q Consensus        85 vV~~~g~~--~~~r~~~~~l~~~g~~~~va~~~~~y~~~a~~l~~  127 (130)
                      +|+.....  ..+|.       .|..-++..+.++-.+...++++
T Consensus       297 ~Inir~~tERqe~~~-------~g~nilv~~~~~~I~~~i~~~l~  334 (377)
T d1o6ca_         297 VLVLRDTTERPEGVE-------AGTLKLAGTDEENIYQLAKQLLT  334 (377)
T ss_dssp             EEEECSCCC---CTT-------TTSSEEECSCHHHHHHHHHHHHH
T ss_pred             EEEeCCCCcCcchhh-------cCeeEECCCCHHHHHHHHHHHHh
Confidence            99985422  11221       24444555565554444444433

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.027  Score=41.77  Aligned_cols=78  Identities=15%  Similarity=0.144  Sum_probs=55.0

Q ss_pred             CCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecCC-CchhhhhHHHHHHhcCCCCceecCHHHH
Q psy15363         40 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG-ETLASRVAASQLATLGCPELIARTHKEY  118 (130)
Q Consensus        40 ~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~g-~~~~~r~~~~~l~~~g~~~~va~~~~~y  118 (130)
                      +++.+.+.+++.++..+++.|++++    -++|....||-+.|+|+|.... ....+|+.+      |..-++..+.++.
T Consensus       263 ~ni~~~~~l~~~~fl~ll~~a~~vi----gnSssgi~Ea~~lg~P~Inir~~ter~~~~~~------g~~i~v~~~~~~I  332 (376)
T d1f6da_         263 KNVILIDPQEYLPFVWLMNHAWLIL----TDSGGIQEEAPSLGKPVLVMRDTTERPEAVTA------GTVRLVGTDKQRI  332 (376)
T ss_dssp             TTEEEECCCCHHHHHHHHHHCSEEE----ESSSGGGGTGGGGTCCEEECSSCCSCHHHHHH------TSEEECCSSHHHH
T ss_pred             ccceeeccccHHHHHHHHhhceEEE----ecCcchHhhHHHhCCCEEEcCCCccCccceec------CeeEECCCCHHHH
Confidence            7999999999999999999999998    4445667899999999999843 222333322      4334455566665


Q ss_pred             HHHHHHhcc
Q psy15363        119 QDIAIRLGT  127 (130)
Q Consensus       119 ~~~a~~l~~  127 (130)
                      .+.+.+++.
T Consensus       333 ~~ai~~~l~  341 (376)
T d1f6da_         333 VEEVTRLLK  341 (376)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            555544443

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=95.52  E-value=0.014  Score=41.72  Aligned_cols=89  Identities=12%  Similarity=-0.013  Sum_probs=55.7

Q ss_pred             HHHHHhhC--CCcEEEEeecCcccHHHHHHHHHHcCCC-CCC-EEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHH
Q psy15363          3 DIFVLKAV--PNSILWLLKFPAVGEANIQATAQALGLD-QHR-ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDV   78 (130)
Q Consensus         3 w~~il~~~--P~a~l~i~g~~~~~~~~l~~~~~~~g~~-~~r-v~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEA   78 (130)
                      |.++.+..  .+.+++++|+ +.+++..+...+..... ..+ +.+.|..+-.|+.++++.||+++.+    -+..+=-|
T Consensus       202 ~~~L~~~l~~~~~~ivl~g~-~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~----Dtg~~HlA  276 (348)
T d1pswa_         202 YAELAKQLIDEGYQVVLFGS-AKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTN----DSGLMHVA  276 (348)
T ss_dssp             HHHHHHHHHHTTCEEEECCC-GGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEE----SSHHHHHH
T ss_pred             HhhhHHHHhhcCCccccccc-cchHHHHHHHHHhhhcccccccccccCCccHHHHHHHHhcceeEeec----CccHHHHH
Confidence            55555443  2567777874 34444444433322111 123 5567888989999999999999822    12335678


Q ss_pred             HhcCCcEEecCCCchhhh
Q psy15363         79 LWTGTPVVTLPGETLASR   96 (130)
Q Consensus        79 la~G~PvV~~~g~~~~~r   96 (130)
                      .++|+|+|++-|.....+
T Consensus       277 aa~g~p~i~lfg~~~~~~  294 (348)
T d1pswa_         277 AALNRPLVALYGPSSPDF  294 (348)
T ss_dssp             HHTTCCEEEEESSSCTTS
T ss_pred             HHcCCCEEEEECCCCHhh
Confidence            999999999976644333

>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator for cyanobacterial phytochrome
species: Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]

Probab=94.09  E-value=0.37  Score=30.33  Aligned_cols=112  Identities=13%  Similarity=0.124  Sum_probs=71.0

Q ss_pred             CCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhcc---------ccEE-EcC-CCCCCchHHHHH
Q psy15363         10 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL---------ADVC-LDT-PLCNGHTTSMDV   78 (130)
Q Consensus        10 ~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~---------~Dv~-l~~-~~~~~g~~~lEA   78 (130)
                      +|.-+++++-+....+..+++.+++.|.. -+|...  .+.++-..+++.         -|+. +|- .|...|..+++.
T Consensus         1 nppk~ILiVdD~~~~~~~l~~~L~~~g~~-~~v~~a--~~g~~Al~~l~~~~~~~~~~~pdlIllD~~mP~~~G~el~~~   77 (144)
T d1i3ca_           1 NPPKVILLVEDSKADSRLVQEVLKTSTID-HELIIL--RDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAE   77 (144)
T ss_dssp             CCCEEEEEECCCHHHHHHHHHHHHSCCSC-EEEEEE--CSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEE--CCHHHHHHHHHhchhhhccCCCCEEEEECccccccchHHHHH
Confidence            46567778876444567788888888875 455544  334555555543         4676 454 466678888888


Q ss_pred             Hh-----cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhc
Q psy15363         79 LW-----TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG  126 (130)
Q Consensus        79 la-----~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~  126 (130)
                      +-     ..+|||.+.+..-.....  -....|.++++..  +.+++.++..++.
T Consensus        78 ir~~~~~~~iPvi~lT~~~~~~~~~--~a~~~Ga~~yl~KP~~~~~L~~~i~~l~  130 (144)
T d1i3ca_          78 IKQNPDLKRIPVVVLTTSHNEDDVI--ASYELHVNCYLTKSRNLKDLFKMVQGIE  130 (144)
T ss_dssp             HHHCTTTTTSCEEEEESCCCHHHHH--HHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred             HHhCcccCCCeEEEEECCCCHHHHH--HHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence            74     468999876543332222  1234699987663  7788877765543

>d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator for cyanobacterial phytochrome
species: Calothrix sp. pcc 7601, RcpA [TaxId: 1188]

Probab=92.75  E-value=0.63  Score=29.01  Aligned_cols=107  Identities=14%  Similarity=0.085  Sum_probs=67.5

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhcc---------ccEE-EcC-CCCCCchHHHHHHh--
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL---------ADVC-LDT-PLCNGHTTSMDVLW--   80 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~---------~Dv~-l~~-~~~~~g~~~lEAla--   80 (130)
                      |++++-+....+..+++.+++.|.. -+|....  +.++-..+++.         -|+. +|- .|...|..+++.+-  
T Consensus         4 rILiVDD~~~~~~~l~~~L~~~g~~-~~v~~a~--~g~eAl~~l~~~~~~~~~~~pdlillD~~mP~~dG~el~~~ir~~   80 (140)
T d1k68a_           4 KIFLVEDNKADIRLIQEALANSTVP-HEVVTVR--DGMEAMAYLRQEGEYANASRPDLILLDLNLPKKDGREVLAEIKSD   80 (140)
T ss_dssp             EEEEECCCHHHHHHHHHHHHTCSSC-CEEEEEC--SHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHS
T ss_pred             cEEEEECCHHHHHHHHHHHHHcCCC-eEEEEEC--CHHHHHHHHHHhHHhhccCCCCEEEEeeccccccChHHHHHHHhC
Confidence            5677776444567788888888875 4565543  33555555543         3666 554 47667888887763  


Q ss_pred             ---cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHh
Q psy15363         81 ---TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL  125 (130)
Q Consensus        81 ---~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l  125 (130)
                         ..+|||.+.+.........  ....|.++++..  +.+++.+...++
T Consensus        81 ~~~~~iPvI~ls~~~~~~~~~~--a~~~Ga~~yl~KP~~~~~L~~~i~~i  128 (140)
T d1k68a_          81 PTLKRIPVVVLSTSINEDDIFH--SYDLHVNCYITKSANLSQLFQIVKGI  128 (140)
T ss_dssp             TTGGGSCEEEEESCCCHHHHHH--HHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred             cccCCCcEEEEeCCCCHHHHHH--HHHCCCCEEEECCCCHHHHHHHHHHH
Confidence               4689998876543332221  224699887653  778887776654

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.53  E-value=0.19  Score=34.09  Aligned_cols=80  Identities=13%  Similarity=0.050  Sum_probs=54.6

Q ss_pred             HHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEE-cCCCCCCchHHHHHHhcCC
Q psy15363          5 FVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCL-DTPLCNGHTTSMDVLWTGT   83 (130)
Q Consensus         5 ~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l-~~~~~~~g~~~lEAla~G~   83 (130)
                      ..++..|+.+++-+.+  ...+..++.++++|++...+....  +.+++.. -...|+++ .+.+....-.+.+||..|+
T Consensus        51 ~~~~~~~~~~ivav~d--~~~~~a~~~~~~~~i~~~~~~~~~--d~~ell~-~~~iD~V~I~tp~~~H~~~~~~al~~gk  125 (221)
T d1h6da1          51 PGFAGCQHSRIEALVS--GNAEKAKIVAAEYGVDPRKIYDYS--NFDKIAK-DPKIDAVYIILPNSLHAEFAIRAFKAGK  125 (221)
T ss_dssp             HHTTTCSSEEEEEEEC--SCHHHHHHHHHHTTCCGGGEECSS--SGGGGGG-CTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred             HHHHhCCCceEEEEec--CCHHHHHHHHHhhccccccccccC--chhhhcc-cccceeeeeccchhhhhhHHHHhhhcch
Confidence            4556778888887765  355677888899998744554432  2344432 13578774 4445556778999999999


Q ss_pred             cEEecC
Q psy15363         84 PVVTLP   89 (130)
Q Consensus        84 PvV~~~   89 (130)
                      +|++-+
T Consensus       126 ~v~~EK  131 (221)
T d1h6da1         126 HVMCEK  131 (221)
T ss_dssp             EEEECS
T ss_pred             hhhcCC
Confidence            999864

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.47  E-value=0.62  Score=30.10  Aligned_cols=80  Identities=10%  Similarity=-0.039  Sum_probs=55.3

Q ss_pred             HHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCC-CCCchHHHHHHhcC
Q psy15363          4 IFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTG   82 (130)
Q Consensus         4 ~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~-~~~g~~~lEAla~G   82 (130)
                      .+.+...|+..++-+.+  ...+..++..++.++. +...+..  +.+++..- ...|+++-+.| ......+.+|+-.|
T Consensus        17 ~~~l~~~~~~~i~ai~d--~~~~~~~~~~~~~~~~-~~~~~~~--~~~~ll~~-~~iD~v~I~tp~~~h~~~~~~~l~~g   90 (184)
T d1ydwa1          17 SRAIHLAPNATISGVAS--RSLEKAKAFATANNYP-ESTKIHG--SYESLLED-PEIDALYVPLPTSLHVEWAIKAAEKG   90 (184)
T ss_dssp             HHHHHHCTTEEEEEEEC--SSHHHHHHHHHHTTCC-TTCEEES--SHHHHHHC-TTCCEEEECCCGGGHHHHHHHHHTTT
T ss_pred             HHHHHhCCCCEEEEEEe--CCccccccchhccccc-cceeecC--cHHHhhhc-cccceeeecccchhhcchhhhhhhcc
Confidence            45677889999887775  3456677888899986 5554433  34565542 35788755444 45567789999999


Q ss_pred             CcEEecC
Q psy15363         83 TPVVTLP   89 (130)
Q Consensus        83 ~PvV~~~   89 (130)
                      +||++-+
T Consensus        91 ~~v~~EK   97 (184)
T d1ydwa1          91 KHILLEK   97 (184)
T ss_dssp             CEEEECS
T ss_pred             ceeeccc
Confidence            9999853

>d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator for cyanobacterial phytochrome
species: Calothrix sp. pcc 7601, RcpB [TaxId: 1188]

Probab=90.52  E-value=1.2  Score=27.87  Aligned_cols=108  Identities=11%  Similarity=0.034  Sum_probs=68.6

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc------------cccEE-EcC-CCCCCchHHHHHH
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ------------LADVC-LDT-PLCNGHTTSMDVL   79 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~------------~~Dv~-l~~-~~~~~g~~~lEAl   79 (130)
                      +++++-++...+..+++.+++.|.. .+|.....  .++-..+++            ..|+. +|- .|.-.|..+++.+
T Consensus         8 ~ILiVDD~~~~~~~l~~~L~~~g~~-~~v~~a~~--g~eAl~~l~~~~~~~~~~~~~~pdlillD~~mP~~~G~el~~~i   84 (149)
T d1k66a_           8 PLLVVEDSDEDFSTFQRLLQREGVV-NPIYRCIT--GDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEI   84 (149)
T ss_dssp             CEEEECCCHHHHHHHHHHHHHTTBC-SCEEEECS--HHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHH
T ss_pred             cEEEEECCHHHHHHHHHHHHHcCCc-eEEEEECC--hHHHHHHHHhhccccccccccCCCeEEccccccCCCcHHHHHHH
Confidence            4667776545678889999999985 55644332  244444443            25766 564 4766788888887


Q ss_pred             h-----cCCcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhc
Q psy15363         80 W-----TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG  126 (130)
Q Consensus        80 a-----~G~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~  126 (130)
                      -     ..+|||.+.+........  -....|..+++..  +.+++.+...+++
T Consensus        85 r~~~~~~~ipiI~lT~~~~~~~~~--~~~~~Ga~~~l~KP~~~~~L~~~i~~~l  136 (149)
T d1k66a_          85 KQDEVLKKIPVVIMTTSSNPKDIE--ICYSYSISSYIVKPLEIDRLTETVQTFI  136 (149)
T ss_dssp             TTSTTGGGSCEEEEESCCCHHHHH--HHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred             HhccccCCCeEEEEeCCCCHHHHH--HHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence            3     478999886654333222  2234699887653  7777777666554

>d1vi6a_ c.23.15.1 (A:) Ribosomal protein S2 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Ribosomal protein S2
family: Ribosomal protein S2
domain: Ribosomal protein S2
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.88  E-value=0.13  Score=34.79  Aligned_cols=81  Identities=16%  Similarity=0.129  Sum_probs=53.2

Q ss_pred             HhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEe-cCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcE
Q psy15363          7 LKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPV   85 (130)
Q Consensus         7 l~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~-g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~Pv   85 (130)
                      ++++.+..++++|........+++.+++.|...=.=+|+ |..+.. ....++.-|+.+-+-|..-...+.||.-+|+||
T Consensus        58 l~~~~~~~ILfVgtk~~~~~~v~~~A~~~g~~~v~~RWlgG~LTN~-~~~~~~~P~~liv~dp~~d~~ai~Ea~~l~IPv  136 (193)
T d1vi6a_          58 LSRYEPSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNP-MLSEYREPEVVFVNDPAIDKQAVSEATAVGIPV  136 (193)
T ss_dssp             HTTSCGGGEEEEECSGGGHHHHHHHHHHHCCEEEESSCCTTTTTCT-TSTTCCCCSEEEESCTTTTHHHHHHHHHTTCCE
T ss_pred             HHHhccCceEEeecccchHHHHHHHHHhcCCCcccccccCCcccch-HHhhcccceEEEEEcCcchHHHHHHHHHcCCCe
Confidence            344445677888875556777888888877431001122 333332 223466778887666777778999999999999


Q ss_pred             Eec
Q psy15363         86 VTL   88 (130)
Q Consensus        86 V~~   88 (130)
                      |+.
T Consensus       137 I~i  139 (193)
T d1vi6a_         137 VAL  139 (193)
T ss_dssp             EEE
T ss_pred             eeE
Confidence            987

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.78  E-value=0.2  Score=31.82  Aligned_cols=98  Identities=14%  Similarity=-0.002  Sum_probs=52.1

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHH--hhccccEEEcC-CCCCCchHHHHHHhcCCcEEecCC
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVR--RGQLADVCLDT-PLCNGHTTSMDVLWTGTPVVTLPG   90 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~--~~~~~Dv~l~~-~~~~~g~~~lEAla~G~PvV~~~g   90 (130)
                      |+.+.|-.|..-..+.+.+.+.    +.+.+.+.++..+-..  .-..+|+++|- .|...-..+-.+...|+|+|+-..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~----~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTT   76 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAA----DDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT   76 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHS----TTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEecc
Confidence            4667774344334555555442    3444544444321111  12569999984 466665667778899999887533


Q ss_pred             Cchhhhh---HHHHHHhcCCCCceecCH
Q psy15363         91 ETLASRV---AASQLATLGCPELIARTH  115 (130)
Q Consensus        91 ~~~~~r~---~~~~l~~~g~~~~va~~~  115 (130)
                      ..-..+.   -..+...-..+-+++.+.
T Consensus        77 G~~~~~~~~l~~~~~~~~~ipil~apNf  104 (135)
T d1yl7a1          77 GFTAERFQQVESWLVAKPNTSVLIAPNF  104 (135)
T ss_dssp             CCCHHHHHHHHHHHHSCTTCEEEECSCC
T ss_pred             ccchhHHHHHHHHHHhcCCCCEEEcCCc
Confidence            3222222   111122335555666654

>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator PleD, receiver domain
species: Caulobacter crescentus [TaxId: 155892]

Probab=88.77  E-value=1.6  Score=26.85  Aligned_cols=106  Identities=13%  Similarity=0.042  Sum_probs=66.0

Q ss_pred             cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--cccEE-EcC-CCCCCchHHHHHHh-----cCC
Q psy15363         13 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVC-LDT-PLCNGHTTSMDVLW-----TGT   83 (130)
Q Consensus        13 a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--~~Dv~-l~~-~~~~~g~~~lEAla-----~G~   83 (130)
                      +|++++-++...++.+++.+++.|.   +|....  +.++-...+.  ..|+. +|- .|...|..+++.+-     ..+
T Consensus         2 arILiVDD~~~~~~~l~~~L~~~g~---~v~~a~--~~~eal~~~~~~~~dlil~D~~~p~~~G~~~~~~ir~~~~~~~~   76 (139)
T d1w25a1           2 ARILVVDDIEANVRLLEAKLTAEYY---EVSTAM--DGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHI   76 (139)
T ss_dssp             CEEEEECSSTTHHHHHHHHHHHTTC---EEEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTS
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCC---EEEEEc--cchhhhhhhhcccceeeeeeccccCCCchHHHHHhhhcccccCC
Confidence            6888998755567889999999886   354433  3334333333  38888 453 46666777766553     468


Q ss_pred             cEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHh
Q psy15363         84 PVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL  125 (130)
Q Consensus        84 PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l  125 (130)
                      |||.+.+..-......+ + ..|..+++..  +.+++..+...+
T Consensus        77 piI~lt~~~~~~~~~~a-~-~~Ga~dyl~KP~~~~~L~~~i~~~  118 (139)
T d1w25a1          77 PVVLITALDGRGDRIQG-L-ESGASDFLTKPIDDVMLFARVRSL  118 (139)
T ss_dssp             CEEEEECSSCHHHHHHH-H-HHTCCEEEESSCCHHHHHHHHHHH
T ss_pred             CEEEEEcCCCHHHHHHH-H-HcCCCEEEECCCCHHHHHHHHHHH
Confidence            99988665433322221 2 3599997763  667776665444

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=88.55  E-value=1.3  Score=35.69  Aligned_cols=51  Identities=16%  Similarity=0.108  Sum_probs=43.2

Q ss_pred             CEEEecCCCHHHHHHhhccccEEEcCC--C-CCCchHHHHHHhcCCcEEec-CCC
Q psy15363         41 RILFSNVAAKEEHVRRGQLADVCLDTP--L-CNGHTTSMDVLWTGTPVVTL-PGE   91 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv~l~~~--~-~~~g~~~lEAla~G~PvV~~-~g~   91 (130)
                      ||.|+..-+..--..++..|||.+.++  | +.+||+-+=|+.-|++.+++ +|.
T Consensus       606 kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw  660 (796)
T d1l5wa_         606 KVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGA  660 (796)
T ss_dssp             EEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTT
T ss_pred             eEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccch
Confidence            899999988766667889999999876  4 46899999999999999977 454

>d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Phosphotyrosine protein phosphatases I-like
superfamily: PTS system IIB component-like
family: PTS system, Lactose/Cellobiose specific IIB subunit
domain: Enzyme IIB-cellobiose
species: Escherichia coli [TaxId: 562]

Probab=88.12  E-value=0.66  Score=27.88  Aligned_cols=74  Identities=20%  Similarity=0.194  Sum_probs=50.2

Q ss_pred             EEEEeecCccc----HHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHhcCCcEEecC
Q psy15363         14 ILWLLKFPAVG----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP   89 (130)
Q Consensus        14 ~l~i~g~~~~~----~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla~G~PvV~~~   89 (130)
                      ++++++.+|..    -..+++.+++.|++ =.|...+....++   .+...|+.|-.....+-..-++..+.++||.+.+
T Consensus         3 ~IlL~C~~G~STs~l~~km~~~a~~~~~~-~~i~A~~~~~~~~---~~~~~DviLl~PQv~~~~~~i~~~~~~~pv~vI~   78 (103)
T d1iiba_           3 HIYLFSSAGMSTSLLVSKMRAQAEKYEVP-VIIEAFPETLAGE---KGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVID   78 (103)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGHHH---HHTTCSEEEECGGGGGGHHHHHHHCTTSCEEECC
T ss_pred             EEEEECCCCccHHHHHHHHHHHHHHcCCC-EEEEEechHHHhh---hccCCCEEEECHHHHHHHHHHHHHcCCCCEEEeC
Confidence            34566644432    45788889999985 4566555544444   4568999986555455667888888899999876


Q ss_pred             CC
Q psy15363         90 GE   91 (130)
Q Consensus        90 g~   91 (130)
                      ..
T Consensus        79 ~~   80 (103)
T d1iiba_          79 SL   80 (103)
T ss_dssp             HH
T ss_pred             hH
Confidence            53

>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Sinorhizobium meliloti, CheY2 [TaxId: 382]

Probab=87.44  E-value=1.9  Score=26.13  Aligned_cols=110  Identities=12%  Similarity=0.081  Sum_probs=70.9

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhcc--ccEE-EcC-CCCCCchHHHHHH-----hcC
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL--ADVC-LDT-PLCNGHTTSMDVL-----WTG   82 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~--~Dv~-l~~-~~~~~g~~~lEAl-----a~G   82 (130)
                      ..+++++-++...+..+++.+++.|..  .|....  +.++-...++.  -|+. +|- .|...|..+++.+     ...
T Consensus         6 ~~kILiVDD~~~~~~~l~~~L~~~g~~--~v~~a~--~~~~al~~l~~~~~dlii~D~~mP~~~G~el~~~lr~~~~~~~   81 (129)
T d1p6qa_           6 KIKVLIVDDQVTSRLLLGDALQQLGFK--QITAAG--DGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKK   81 (129)
T ss_dssp             CCCEEEECSSHHHHHHHHHHHHTTTCS--CEECCS--SHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTT
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCe--EEEEEC--CHHHHHHHHHhCCCCeEEeeeecCCCChHHHHHHHHhCcccCC
Confidence            357778876444567788888888873  444432  33444455543  6777 453 4777799999887     346


Q ss_pred             CcEEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc
Q psy15363         83 TPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT  127 (130)
Q Consensus        83 ~PvV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~  127 (130)
                      +|+|.+.+..-.....  -....|..+++..  +.+++.+...++++
T Consensus        82 ~pii~lt~~~~~~~~~--~a~~~G~~~~l~KP~~~~~L~~~i~~vl~  126 (129)
T d1p6qa_          82 AAFIILTAQGDRALVQ--KAAALGANNVLAKPFTIEKMKAAIEAVFG  126 (129)
T ss_dssp             CEEEECCSCCCHHHHH--HHHHHTCSCEECCCSSHHHHHHHHHHHHH
T ss_pred             CeEEEEEecCCHHHHH--HHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence            8988776643332222  2334689887763  78888888777654

>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator DrrB
species: Thermotoga maritima [TaxId: 2336]

Probab=87.18  E-value=1.9  Score=25.83  Aligned_cols=107  Identities=13%  Similarity=0.012  Sum_probs=67.1

Q ss_pred             cEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEE-EcC-CCCCCchHHHHHHh---cCCcEEe
Q psy15363         13 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVC-LDT-PLCNGHTTSMDVLW---TGTPVVT   87 (130)
Q Consensus        13 a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~-l~~-~~~~~g~~~lEAla---~G~PvV~   87 (130)
                      .+++++-+....++.+++.+++.|    ++.-  ..+..+.......-|+. +|- .|...|..++.-+-   ..+|||.
T Consensus         3 ~kILiVDDd~~~~~~l~~~L~~~g----~v~~--~~~~~~al~~~~~~dlillD~~mP~~~G~~~~~~lr~~~~~~~ii~   76 (120)
T d1p2fa2           3 WKIAVVDDDKNILKKVSEKLQQLG----RVKT--FLTGEDFLNDEEAFHVVVLDVMLPDYSGYEICRMIKETRPETWVIL   76 (120)
T ss_dssp             EEEEEECSCHHHHHHHHHHHTTTE----EEEE--ESSHHHHHHCCSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHhCC----EEEE--ECCHHHHHhcCCCCCEEEEeCcccccchhHHHHHHhhcCCCCcEEE
Confidence            367788764334566777776655    3332  23455655555667888 564 47777888877654   6788888


Q ss_pred             cCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc
Q psy15363         88 LPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT  127 (130)
Q Consensus        88 ~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~  127 (130)
                      ..+..-......  .-..|..+++..  +.+++.++..++++
T Consensus        77 it~~~~~~~~~~--a~~~Ga~dyl~KP~~~~~L~~~i~~~l~  116 (120)
T d1p2fa2          77 LTLLSDDESVLK--GFEAGADDYVTKPFNPEILLARVKRFLE  116 (120)
T ss_dssp             EESCCSHHHHHH--HHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             EecCCCHHHHHH--HHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence            766543332222  224588887763  78888888777654

>d2aizp1 d.79.7.1 (P:1-134) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Peptidoglycan-associated lipoprotein, PAL, periplasmic domain
species: Haemophilus influenzae [TaxId: 727]

Probab=86.31  E-value=0.74  Score=28.67  Aligned_cols=45  Identities=11%  Similarity=0.099  Sum_probs=33.7

Q ss_pred             HHHHHhhCCCcEEEEeecCc---cc---------H-HHHHHHHHHcCCCCCCEEEecC
Q psy15363          3 DIFVLKAVPNSILWLLKFPA---VG---------E-ANIQATAQALGLDQHRILFSNV   47 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~---~~---------~-~~l~~~~~~~g~~~~rv~f~g~   47 (130)
                      ++.+++.+|+.++.|.|...   ..         + ..+++++.+.|++++||...|.
T Consensus        52 la~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~~V~~~L~~~Gi~~~ri~~~g~  109 (134)
T d2aizp1          52 HAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSY  109 (134)
T ss_dssp             HHHHHHHSTTCCEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred             HHHHHHhCCCcEEEEeeccccccccccchhHHHHHHHHHHHHHHHcCCccccceeEEc
Confidence            56788999999999999632   11         1 2456778889999889988765

>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Escherichia coli [TaxId: 562]

Probab=86.01  E-value=2.2  Score=25.46  Aligned_cols=107  Identities=14%  Similarity=0.050  Sum_probs=68.4

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhcc--ccEE-EcC-CCCCCchHHHHHHh-----cCCc
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL--ADVC-LDT-PLCNGHTTSMDVLW-----TGTP   84 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~--~Dv~-l~~-~~~~~g~~~lEAla-----~G~P   84 (130)
                      +++++-++...++.++..+++.|..   |...  .+.++-...++.  -|+. +|- .|...|..+++.+-     ..+|
T Consensus         2 kILiVDD~~~~~~~l~~~L~~~g~~---v~~a--~~~~~al~~l~~~~~dlil~D~~mp~~~G~~l~~~lr~~~~~~~~p   76 (121)
T d1zesa1           2 RILVVEDEAPIREMVCFVLEQNGFQ---PVEA--EDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIP   76 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCE---EEEE--CSHHHHHHHSSSSCCSEEEECSSCTTSCHHHHHHHHHHSTTTTTSC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCE---EEEE--CChHHHHHHHHccCCCEEEeecCCCCCCHHHHHHHHHhCccCCCCe
Confidence            4667776544577888889988863   4332  344555555544  7777 453 47777888888763     4599


Q ss_pred             EEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc
Q psy15363         85 VVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT  127 (130)
Q Consensus        85 vV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~  127 (130)
                      ||.+.+..-....  .-....|..+++..  +.+++.+...++++
T Consensus        77 vi~lt~~~~~~~~--~~~~~~G~~d~l~KP~~~~~L~~~v~~~lr  119 (121)
T d1zesa1          77 VVMLTARGEEEDR--VRGLETGADDYITKPFSPKELVARIKAVMR  119 (121)
T ss_dssp             EEEEESCCSHHHH--HHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHH--HHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence            9987654322211  12224599998764  78888887766553

>d2hqsc1 d.79.7.1 (C:68-173) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Peptidoglycan-associated lipoprotein, PAL, periplasmic domain
species: Escherichia coli [TaxId: 562]

Probab=85.29  E-value=1.1  Score=26.39  Aligned_cols=45  Identities=11%  Similarity=0.098  Sum_probs=33.6

Q ss_pred             HHHHHhhCCCcEEEEeecCcc---c----------HHHHHHHHHHcCCCCCCEEEecC
Q psy15363          3 DIFVLKAVPNSILWLLKFPAV---G----------EANIQATAQALGLDQHRILFSNV   47 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~---~----------~~~l~~~~~~~g~~~~rv~f~g~   47 (130)
                      +.++++.+|+.++.|.|....   .          -..+++++.+.|++++|+...|.
T Consensus        24 l~~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~~V~~~L~~~Gi~~~ri~~~g~   81 (106)
T d2hqsc1          24 HANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSY   81 (106)
T ss_dssp             HHHHHHHCTTCCEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred             HHHHHHhCCCcEEEEEecccccchhhhhhhHHHHHHhHHHHHHHhcCCccceEEEEEe
Confidence            567889999999999997321   1          12466777888999889888764

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=84.47  E-value=3.2  Score=33.53  Aligned_cols=51  Identities=16%  Similarity=0.124  Sum_probs=42.9

Q ss_pred             CEEEecCCCHHHHHHhhccccEEEcCC--C-CCCchHHHHHHhcCCcEEec-CCC
Q psy15363         41 RILFSNVAAKEEHVRRGQLADVCLDTP--L-CNGHTTSMDVLWTGTPVVTL-PGE   91 (130)
Q Consensus        41 rv~f~g~~~~~~~~~~~~~~Dv~l~~~--~-~~~g~~~lEAla~G~PvV~~-~g~   91 (130)
                      ||.|+..-.-.--..++..|||.+.++  | +.+||+-+=++.-|++.+++ +|.
T Consensus       630 kVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGw  684 (824)
T d2gj4a1         630 RVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGA  684 (824)
T ss_dssp             EEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTT
T ss_pred             eEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccch
Confidence            799999988666667889999999876  4 46899999999999999977 554

>d1dxya2 c.23.12.1 (A:1-100,A:300-330) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Formate/glycerate dehydrogenase catalytic domain-like
family: Formate/glycerate dehydrogenases, substrate-binding domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=84.06  E-value=2.4  Score=25.89  Aligned_cols=75  Identities=9%  Similarity=-0.030  Sum_probs=50.9

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCCCCCCchHHHHHHh-cCCcEEecCCC
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGE   91 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~~~~~g~~~lEAla-~G~PvV~~~g~   91 (130)
                      ++++.+....+.+.++++.++++++   |.+......++.......+|..+-.......-.++|++. .++=.|+..|.
T Consensus         2 KIl~~~~~~~e~~~l~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~vl~~l~~~~Lk~I~~~~v   77 (131)
T d1dxya2           2 KIIAYGARVDEIQYFKQWAKDTGNT---LEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNV   77 (131)
T ss_dssp             EEEECSCCTTTHHHHHHHHHHHCCE---EEECSSCCCTTGGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSS
T ss_pred             EEEEEecCcCcHHHHHHHHHHcCeE---EEEcCCCCCHHHHHHhcCCCEEEEecCCCCCHHHHhhcccCCeEEEEEccc
Confidence            3455554334677888888888863   677766655677777788997654333334567999985 47888887653

>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TM1055
species: Thermotoga maritima [TaxId: 2336]

Probab=83.84  E-value=0.88  Score=29.58  Aligned_cols=72  Identities=21%  Similarity=0.117  Sum_probs=43.5

Q ss_pred             HHHHhhccccEEEcCCCCCCch--HHHHHHhcCCcEEecCCC-chhhhhHHHHHHhcCC------CC-ceecCHHHHHHH
Q psy15363         52 EHVRRGQLADVCLDTPLCNGHT--TSMDVLWTGTPVVTLPGE-TLASRVAASQLATLGC------PE-LIARTHKEYQDI  121 (130)
Q Consensus        52 ~~~~~~~~~Dv~l~~~~~~~g~--~~lEAla~G~PvV~~~g~-~~~~r~~~~~l~~~g~------~~-~va~~~~~y~~~  121 (130)
                      ....++..+|.|+- +|-+.||  -++|++..++|+|.+.++ .|...+...+++ .|.      .. .+++|+++-+++
T Consensus        89 Rk~~m~~~sda~I~-lPGG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~-~~~i~~~~~~~i~~~~~~ee~~~~  166 (170)
T d1rcua_          89 RSFVLLRNADVVVS-IGGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLID-GKYLDNRRIVEIHQAWTVEEAVQI  166 (170)
T ss_dssp             HHHHHHTTCSEEEE-ESCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBT-TTBSSTTCCSCEEEESSHHHHHHH
T ss_pred             hHHHHhhcccceee-eccccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHH-CCCCCHHHcCeEEEeCCHHHHHHH
Confidence            34455688999983 4544454  378899999999998764 343433211111 111      11 356889888877


Q ss_pred             HHHh
Q psy15363        122 AIRL  125 (130)
Q Consensus       122 a~~l  125 (130)
                      ..+|
T Consensus       167 l~~l  170 (170)
T d1rcua_         167 IEQI  170 (170)
T ss_dssp             HHTC
T ss_pred             HHcC
Confidence            6543

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=82.70  E-value=0.89  Score=28.77  Aligned_cols=75  Identities=13%  Similarity=0.063  Sum_probs=49.2

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC-CCCCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~~~~g~~~lEAla~   81 (130)
                      +..+++..|+..++-+.+..  .+..++..+++++.     +.  -..+++   ....|+.+-.. +....-.+..|+..
T Consensus        17 ~~~~l~~~~~~~i~~v~d~~--~~~~~~~~~~~~~~-----~~--~~~~~l---~~~~D~V~I~tp~~~h~~~~~~al~~   84 (164)
T d1tlta1          17 WLPVLAAASDWTLQGAWSPT--RAKALPICESWRIP-----YA--DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNA   84 (164)
T ss_dssp             HHHHHHSCSSEEEEEEECSS--CTTHHHHHHHHTCC-----BC--SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHT
T ss_pred             HHHHHHhCCCcEEEEEEech--hHhhhhhhhccccc-----cc--ccchhh---hhhcccccccccchhccccccccccc
Confidence            45677888998888777532  23456667777763     11  123444   35789875444 44456678889999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |+||++-+
T Consensus        85 gk~V~~EK   92 (164)
T d1tlta1          85 GVHVCVDK   92 (164)
T ss_dssp             TCEEEEES
T ss_pred             cceeeccc
Confidence            99998753

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=82.42  E-value=2.1  Score=26.91  Aligned_cols=76  Identities=14%  Similarity=0.036  Sum_probs=50.2

Q ss_pred             HHHHHhhCCCcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhccccEEEcCC-CCCCchHHHHHHhc
Q psy15363          3 DIFVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWT   81 (130)
Q Consensus         3 w~~il~~~P~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~~~Dv~l~~~-~~~~g~~~lEAla~   81 (130)
                      +..++++.|+..++++.   +..+..+++.+++++. ..  |   .+.+++..  ...|+++-.. +...--.+..|+-.
T Consensus        17 ~~~~l~~~~~~~~~~~d---~~~~~~~~~~~~~~~~-~~--~---~~~~~ll~--~~iD~V~I~tp~~~H~~~~~~al~~   85 (167)
T d1xeaa1          17 YLPVLAQWPDIELVLCT---RNPKVLGTLATRYRVS-AT--C---TDYRDVLQ--YGVDAVMIHAATDVHSTLAAFFLHL   85 (167)
T ss_dssp             HHHHHTTSTTEEEEEEC---SCHHHHHHHHHHTTCC-CC--C---SSTTGGGG--GCCSEEEECSCGGGHHHHHHHHHHT
T ss_pred             HHHHHHhCCCcEEEEEE---CCHHHHHHHHHhcccc-cc--c---ccHHHhcc--cccceeccccccccccccccccccc
Confidence            45678889999887543   3456777888888874 21  2   23344432  3578875444 44455668899999


Q ss_pred             CCcEEecC
Q psy15363         82 GTPVVTLP   89 (130)
Q Consensus        82 G~PvV~~~   89 (130)
                      |+||++-+
T Consensus        86 gk~V~~EK   93 (167)
T d1xeaa1          86 GIPTFVDK   93 (167)
T ss_dssp             TCCEEEES
T ss_pred             ccccccCC
Confidence            99999853

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.99  E-value=3.6  Score=24.60  Aligned_cols=107  Identities=13%  Similarity=0.085  Sum_probs=65.7

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--cccEE-EcC-CCCCCchHHHHHH---hcCCcEE
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVC-LDT-PLCNGHTTSMDVL---WTGTPVV   86 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--~~Dv~-l~~-~~~~~g~~~lEAl---a~G~PvV   86 (130)
                      +++++-+....++.+++.+++.|.   +|....  +.++-...++  .-|+. +|- .|...|..+++.+   ...+|+|
T Consensus         3 kILiVDD~~~~~~~l~~~L~~~g~---~v~~a~--~~~eal~~~~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~piI   77 (121)
T d1ys7a2           3 RVLVVDDDSDVLASLERGLRLSGF---EVATAV--DGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC   77 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTC---EEEEES--SHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCC---EEEEEC--CHHHHHHHHHhCCCCEEEEEeeccCcccHHHHHHHHhcCCCCEEE
Confidence            677787644457788888998886   344433  2344434443  47887 454 4766787777666   4579988


Q ss_pred             ecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc
Q psy15363         87 TLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT  127 (130)
Q Consensus        87 ~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~  127 (130)
                      .+.+..-.....  -....|..+++..  +.+++.++..++++
T Consensus        78 ~lt~~~~~~~~~--~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~  118 (121)
T d1ys7a2          78 VLSARSSVDDRV--AGLEAGADDYLVKPFVLAELVARVKALLR  118 (121)
T ss_dssp             EEECCCTTTCCC--TTTTTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             EEEeeCCHHHHH--HHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence            776543221111  1124588887763  78888887776653

>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.39  E-value=3.7  Score=24.43  Aligned_cols=109  Identities=14%  Similarity=0.061  Sum_probs=67.7

Q ss_pred             CcEEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhh--ccccEE-EcC-CCCCCchHHHHHHh---cCCc
Q psy15363         12 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVC-LDT-PLCNGHTTSMDVLW---TGTP   84 (130)
Q Consensus        12 ~a~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~--~~~Dv~-l~~-~~~~~g~~~lEAla---~G~P   84 (130)
                      |.|++++-+....++.+++.+++.|..   |....  +.++-...+  ..-|+. +|- .|...|..+++.+-   ...|
T Consensus         1 nirILiVdDd~~~~~~l~~~L~~~g~~---v~~a~--~~~~al~~l~~~~~dlillD~~mp~~~g~~~~~~lr~~~~~~p   75 (122)
T d1kgsa2           1 NVRVLVVEDERDLADLITEALKKEMFT---VDVCY--DGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTP   75 (122)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHHTTCE---EEEES--SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHCCCE---EEEEc--chHHHHHHHHhhCccccccccccccchhHHHHHHHHhcCCCCc
Confidence            578888886544577888888988863   44332  223433333  347887 453 47777877777654   5678


Q ss_pred             EEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc
Q psy15363         85 VVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT  127 (130)
Q Consensus        85 vV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~  127 (130)
                      +|.+.+..-..  ...-....|..+++..  +.+++.++..++++
T Consensus        76 iI~lt~~~~~~--~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~  118 (122)
T d1kgsa2          76 VLMLTALSDVE--YRVKGLNMGADDYLPKPFDLRELIARVRALIR  118 (122)
T ss_dssp             EEEEESSCHHH--HHHHTCCCCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCHH--HHHHHHHcCCceeecCCCCHHHHHHHHHHHHH
Confidence            88876643221  1112234688887663  78888887766654

>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Cell division response regulator DivK
species: Caulobacter crescentus [TaxId: 155892]

Probab=80.30  E-value=4.1  Score=24.20  Aligned_cols=107  Identities=13%  Similarity=0.138  Sum_probs=66.5

Q ss_pred             EEEEeecCcccHHHHHHHHHHcCCCCCCEEEecCCCHHHHHHhhc--cccEE-EcC-CCCCCchHHHHHHh-----cCCc
Q psy15363         14 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVC-LDT-PLCNGHTTSMDVLW-----TGTP   84 (130)
Q Consensus        14 ~l~i~g~~~~~~~~l~~~~~~~g~~~~rv~f~g~~~~~~~~~~~~--~~Dv~-l~~-~~~~~g~~~lEAla-----~G~P   84 (130)
                      |++++-++...++.+++.+++.|..   |...  .+..+-...++  .-|+. +|- .|...|..+++.+-     ..+|
T Consensus         3 rILiVDD~~~~~~~l~~~L~~~g~~---v~~a--~~~~~al~~~~~~~~dlil~D~~mp~~dG~el~~~ir~~~~~~~iP   77 (123)
T d1mb3a_           3 KVLIVEDNELNMKLFHDLLEAQGYE---TLQT--REGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIP   77 (123)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCE---EEEE--SCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSC
T ss_pred             eEEEEECCHHHHHHHHHHHHHCCCE---EEEE--CCHHHHHHHHHhCCCCEEEEEeccCCCcHHHHHHHHHhCCCcCCCC
Confidence            5667776544577888899998863   4322  33344333333  47877 454 47777998888885     5679


Q ss_pred             EEecCCCchhhhhHHHHHHhcCCCCceec--CHHHHHHHHHHhcc
Q psy15363         85 VVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT  127 (130)
Q Consensus        85 vV~~~g~~~~~r~~~~~l~~~g~~~~va~--~~~~y~~~a~~l~~  127 (130)
                      +|.+.+.......  .-....|..+++..  +.+++.+...++++
T Consensus        78 ii~lt~~~~~~~~--~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~  120 (123)
T d1mb3a_          78 VVAVTAFAMKGDE--ERIREGGCEAYISKPISVVHFLETIKRLLE  120 (123)
T ss_dssp             EEEEC------CH--HHHHHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred             eEEEEEecCHHHH--HHHHHcCCCEEEECCCCHHHHHHHHHHHHh
Confidence            9888664333222  22334588887763  78899888887765