Psyllid ID: psy15403

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-
MSFLHDQDTMPSTWSPEAMQYKQGYLSDPKDLPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNILRTKFNSR
ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccHHHHHHHHcccccccccccccEEEEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccHHHcccccccccHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccHHHHHHcccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccccHHHHcHHHHHHHHHcccccccHHHHHHHccHHHHccccccccccccEEEEEEEEcccccHHcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccccccc
ccccccccEEEEEEcccccccEEEEEccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccEEEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccHHHHccccHHccccHHHHHHHHHHHHccccHEEEEEEccccHHHHHHHHHHHHcccccccccccccccccccHHHHccEEEEEEcccccEEEEEEEcccHHHHHHcccccccHHHHHHHHcccccccccHEEEEEccccHHHHHHHHHHHHcccccccccccccccccccHHHHccEEEEEEHHcccEEEEEEccccHHHHHccccHHHHHHHHccccccHHHHHHHHcccHHEEEccccccccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccc
msflhdqdtmpstwspeamqykqgylsdpkdlpgylsdpkdlpglaHFCEHMlfmgtetypaeneYNKFLsehsgysnaytsadhtnyhfevspdhlEKTLDIFSKfficplfdasstdrevnavnseheknipndawrldqlekatcdpkhdynrfgtgnketletipkskgidVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKfkdvknknvstpewtthpygkdqlktrgyvtpvkDVRSLlvtfpipdlqeqhkknknvttpewtthpygkdqlktrgyvtpvkDVRSLlvtfpipdlqeqhkknknvttpewtthpygkdqlktrgyvtpvkDVRSLLvtfpipdlqeqhksgpdnylshlighegpgsllSELRRRgwcnslvggprsgakgFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNIlrtkfnsr
msflhdqdtmpstwsPEAMQYKQGYLSDPKDLPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVnseheknipndawRLDQLEKAtcdpkhdynrfgtgnketletipkskgidVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVdkfkdvknknvstpewtthpygkdqlktrgYVTPVKDVRSLLVTfpipdlqeqhkknknvttpewtthpygkdqlktrgYVTPVKDVRSLLVTfpipdlqeqhkknknvttpewtthpygkdqlktrgYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNIlrtkfnsr
MSFLHDQDTMPSTWSPEAMQYKQGYLSDPKDLPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAvdkfkdvknknvSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNILRTKFNSR
****************************************DLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVSPDHLEKTLDIFSKFFICPLFDA**********************WRLDQL***TC*****YNRFG******LETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDL***********TPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDL************PEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDL**********YLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNILRTK****
MSF**********************LSDPKDLPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNV*********YGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFN***T*****
***********STWSPEAMQYKQGYLSDPKDLPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNILRTKFNSR
MSFLHDQDTMPSTWSPEAMQYKQGYLSDPKDLPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNIL*******
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MSFLHDQDTMPSTWSPEAMQYKQGYLSDPKDLPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNILRTKFNSR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query471 2.2.26 [Sep-21-2011]
P35559 1019 Insulin-degrading enzyme yes N/A 0.677 0.313 0.474 1e-108
Q9JHR7 1019 Insulin-degrading enzyme yes N/A 0.677 0.313 0.470 1e-107
Q24K02 1019 Insulin-degrading enzyme yes N/A 0.677 0.313 0.470 1e-106
P14735 1019 Insulin-degrading enzyme yes N/A 0.677 0.313 0.470 1e-106
P22817 990 Insulin-degrading enzyme yes N/A 0.677 0.322 0.441 1e-100
Q10040 856 Putative zinc protease C2 no N/A 0.679 0.373 0.379 4e-76
Q06010 1027 A-factor-processing enzym yes N/A 0.488 0.223 0.530 4e-68
O14077 969 Putative zinc protease mu yes N/A 0.696 0.338 0.352 3e-67
O22941 970 Zinc-metallopeptidase, pe yes N/A 0.471 0.228 0.444 1e-55
Q54JQ2 962 Insulin-degrading enzyme yes N/A 0.509 0.249 0.377 2e-42
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1 Back     alignment and function desciption
 Score =  392 bits (1006), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/417 (47%), Positives = 256/417 (61%), Gaps = 98/417 (23%)

Query: 34  GYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVS 93
           G LSDP ++PGL+HFCEHMLF+GT+ YP ENEY++FLSEH+G SNA+TS +HTNY+F+VS
Sbjct: 95  GSLSDPPNIPGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVS 154

Query: 94  PDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHD 153
            +HLE  LD F++FF+CPLFDAS  DREVNAV+SEHEKN+ NDAWRL QLEKAT +PKH 
Sbjct: 155 HEHLEGALDRFAQFFLCPLFDASCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHP 214

Query: 154 YNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDK 213
           +++FGTGNK TLET P  +GIDVR ELLKFH+ +YSSN+M + +LG+ESLD+L    V  
Sbjct: 215 FSKFGTGNKYTLETRPNQEGIDVREELLKFHSTYYSSNLMAICVLGRESLDDLTNLVVKL 274

Query: 214 FKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTT 273
           F +V+                                                 NKNV  
Sbjct: 275 FSEVE-------------------------------------------------NKNVPL 285

Query: 274 PEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKD 333
           PE+  HP+ ++ LK    + P+KD+R+L VTFPIPDLQ+ +K N                
Sbjct: 286 PEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQQYYKSN---------------- 329

Query: 334 QLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWC 393
                                            P +YL HLIGHEGPGSLLSEL+ +GW 
Sbjct: 330 ---------------------------------PGHYLGHLIGHEGPGSLLSELKSKGWV 356

Query: 394 NSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLE 450
           N+LVGG + GA+GF FF + VDLT +G+ H +DI+  +FQYI+ +  +GPQEW+F E
Sbjct: 357 NTLVGGQKEGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQE 413
Plays a role in the cellular breakdown of insulin, IAPP, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Degrades amyloid formed by APP and IAPP.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 5EC: 6
>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1 Back     alignment and function description
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4 Back     alignment and function description
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1 SV=4 Back     alignment and function description
>sp|Q10040|YQA4_CAEEL Putative zinc protease C28F5.4 OS=Caenorhabditis elegans GN=C28F5.4 PE=3 SV=2 Back     alignment and function description
>sp|Q06010|STE23_YEAST A-factor-processing enzyme OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE23 PE=1 SV=2 Back     alignment and function description
>sp|O14077|MU138_SCHPO Putative zinc protease mug138 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug138 PE=1 SV=1 Back     alignment and function description
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1 Back     alignment and function description
>sp|Q54JQ2|IDE_DICDI Insulin-degrading enzyme homolog OS=Dictyostelium discoideum GN=DDB_G0287851 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query471
345496783 1016 PREDICTED: insulin-degrading enzyme-like 0.677 0.313 0.470 1e-108
345496781 1020 PREDICTED: insulin-degrading enzyme-like 0.677 0.312 0.470 1e-108
357615653 812 putative metalloprotease [Danaus plexipp 0.677 0.392 0.477 1e-107
321477024 983 hypothetical protein DAPPUDRAFT_305640 [ 0.677 0.324 0.484 1e-107
146455165 998 insulin-degrading enzyme [Danio rerio] 0.677 0.319 0.477 1e-107
220679178 998 novel protein similar to H.sapiens IDE, 0.677 0.319 0.477 1e-107
148238275 978 insulin-degrading enzyme [Danio rerio] g 0.677 0.326 0.477 1e-107
340780519 978 Chain A, Rat Insulin Degrading Enzyme (I 0.677 0.326 0.474 1e-106
410900458 987 PREDICTED: insulin-degrading enzyme-like 0.677 0.323 0.477 1e-106
6981076 1019 insulin-degrading enzyme [Rattus norvegi 0.677 0.313 0.474 1e-106
>gi|345496783|ref|XP_003427813.1| PREDICTED: insulin-degrading enzyme-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/417 (47%), Positives = 251/417 (60%), Gaps = 98/417 (23%)

Query: 34  GYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVS 93
           GYLSDPK+LPGLAHFCEHMLF+GT  YP  N+YN++LS++ G SNA T  DHTNY+F+V+
Sbjct: 83  GYLSDPKELPGLAHFCEHMLFLGTTKYPEVNDYNQYLSQNGGASNAATYLDHTNYYFDVN 142

Query: 94  PDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHD 153
           PD LE  LD FS+FF+ PLF  S+T++E+ AV+ EHEKNI ND WR+DQL+K++ DP H 
Sbjct: 143 PDKLEGALDRFSQFFVSPLFTESATEKEITAVHLEHEKNIANDTWRMDQLDKSSADPSHA 202

Query: 154 YNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDK 213
           Y++FGTG+K+TLE IPK K IDVR ELL FHN WYS+NIM L++LGKESLD+LEK  VD 
Sbjct: 203 YSKFGTGSKDTLEVIPKQKNIDVRQELLNFHNTWYSANIMALSVLGKESLDDLEKMIVDM 262

Query: 214 FKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTT 273
           F D+                                                  NKNV  
Sbjct: 263 FSDID-------------------------------------------------NKNVEV 273

Query: 274 PEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKD 333
           P+W  HP+  +  KT+ ++ P+KD+R+L +TFPIPD+QE                     
Sbjct: 274 PKWPAHPFTDEHFKTKWFIVPIKDIRNLNITFPIPDMQE--------------------- 312

Query: 334 QLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWC 393
                                         ++ P +Y SHL+GHEG GSLLS L+ +GWC
Sbjct: 313 ----------------------------HFRAAPVHYWSHLLGHEGKGSLLSTLKEKGWC 344

Query: 394 NSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLE 450
           NSLV G RS A+GF FF+V VDLT +GI H DDIV + FQYI ++ ++GP EWIF E
Sbjct: 345 NSLVSGKRSSARGFDFFSVYVDLTEEGILHVDDIVTMTFQYINMLKNEGPVEWIFEE 401

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|345496781|ref|XP_001603463.2| PREDICTED: insulin-degrading enzyme-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|357615653|gb|EHJ69773.1| putative metalloprotease [Danaus plexippus] Back     alignment and taxonomy information
>gi|321477024|gb|EFX87983.1| hypothetical protein DAPPUDRAFT_305640 [Daphnia pulex] Back     alignment and taxonomy information
>gi|146455165|dbj|BAF62161.1| insulin-degrading enzyme [Danio rerio] Back     alignment and taxonomy information
>gi|220679178|emb|CAX13065.1| novel protein similar to H.sapiens IDE, insulin-degrading enzyme (IDE, zgc:162603) [Danio rerio] Back     alignment and taxonomy information
>gi|148238275|ref|NP_001082994.1| insulin-degrading enzyme [Danio rerio] gi|141796249|gb|AAI39608.1| Zgc:162603 protein [Danio rerio] Back     alignment and taxonomy information
>gi|340780519|pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Back     alignment and taxonomy information
>gi|410900458|ref|XP_003963713.1| PREDICTED: insulin-degrading enzyme-like [Takifugu rubripes] Back     alignment and taxonomy information
>gi|6981076|ref|NP_037291.1| insulin-degrading enzyme [Rattus norvegicus] gi|547706|sp|P35559.1|IDE_RAT RecName: Full=Insulin-degrading enzyme; AltName: Full=Insulin protease; Short=Insulinase; AltName: Full=Insulysin gi|354459772|pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp gi|56492|emb|CAA47689.1| insulin-degrading enzyme [Rattus norvegicus] gi|149062773|gb|EDM13196.1| insulin degrading enzyme [Rattus norvegicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query471
RGD|2861 1019 Ide "insulin degrading enzyme" 0.549 0.254 0.561 4.4e-86
ZFIN|ZDB-GENE-070410-85 998 ide "insulin-degrading enzyme" 0.549 0.259 0.564 1.9e-85
MGI|MGI:96412 1019 Ide "insulin degrading enzyme" 0.549 0.254 0.553 2.4e-85
UNIPROTKB|Q24K02 1019 IDE "Insulin-degrading enzyme" 0.549 0.254 0.553 1.3e-84
UNIPROTKB|E2RGZ3 1019 IDE "Uncharacterized protein" 0.549 0.254 0.553 1.3e-84
UNIPROTKB|F1P6U4 902 IDE "Uncharacterized protein" 0.549 0.287 0.553 1.3e-84
UNIPROTKB|P14735 1019 IDE "Insulin-degrading enzyme" 0.549 0.254 0.553 1.7e-84
UNIPROTKB|E1BTQ0 880 Gga.21599 "Uncharacterized pro 0.549 0.294 0.553 7.3e-84
UNIPROTKB|E1BW46 907 Gga.21599 "Uncharacterized pro 0.549 0.285 0.553 7.3e-84
UNIPROTKB|E1BW52 858 Gga.21599 "Uncharacterized pro 0.549 0.301 0.553 7.3e-84
RGD|2861 Ide "insulin degrading enzyme" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
 Score = 787 (282.1 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
 Identities = 147/262 (56%), Positives = 191/262 (72%)

Query:    34 GYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVS 93
             G LSDP ++PGL+HFCEHMLF+GT+ YP ENEY++FLSEH+G SNA+TS +HTNY+F+VS
Sbjct:    95 GSLSDPPNIPGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVS 154

Query:    94 PDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHD 153
              +HLE  LD F++FF+CPLFDAS  DREVNAV+SEHEKN+ NDAWRL QLEKAT +PKH 
Sbjct:   155 HEHLEGALDRFAQFFLCPLFDASCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHP 214

Query:   154 YNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAXXX 213
             +++FGTGNK TLET P  +GIDVR ELLKFH+ +YSSN+M + +LG+ESLD+L       
Sbjct:   215 FSKFGTGNKYTLETRPNQEGIDVREELLKFHSTYYSSNLMAICVLGRESLDDLTNLVVKL 274

Query:   214 XXXXXXXXXSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTT 273
                        PE+  HP+ ++ LK    + P+KD+R+L VTFPIPDLQ+ +K N     
Sbjct:   275 FSEVENKNVPLPEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQQYYKSNPGHYL 334

Query:   274 PEWTTHPY-GK--DQLKTRGYV 292
                  H   G    +LK++G+V
Sbjct:   335 GHLIGHEGPGSLLSELKSKGWV 356
GO:0001540 "beta-amyloid binding" evidence=IPI
GO:0001948 "glycoprotein binding" evidence=IEA;ISO
GO:0003824 "catalytic activity" evidence=IEA
GO:0004222 "metalloendopeptidase activity" evidence=ISO;ISS;IDA;IMP
GO:0005102 "receptor binding" evidence=IEA;ISO
GO:0005524 "ATP binding" evidence=ISO;ISS;IMP;IPI
GO:0005615 "extracellular space" evidence=ISO;IDA
GO:0005634 "nucleus" evidence=ISO;IDA
GO:0005737 "cytoplasm" evidence=ISO
GO:0005739 "mitochondrion" evidence=IEA;ISO
GO:0005777 "peroxisome" evidence=ISO
GO:0005782 "peroxisomal matrix" evidence=IDA
GO:0005829 "cytosol" evidence=ISO;IDA
GO:0005886 "plasma membrane" evidence=IEA
GO:0006200 "ATP catabolic process" evidence=IDA
GO:0006508 "proteolysis" evidence=ISO
GO:0008233 "peptidase activity" evidence=TAS
GO:0008270 "zinc ion binding" evidence=ISO;ISS;IMP
GO:0008340 "determination of adult lifespan" evidence=IEA;ISO
GO:0009986 "cell surface" evidence=ISO;IDA
GO:0010815 "bradykinin catabolic process" evidence=ISO;ISS
GO:0010992 "ubiquitin homeostasis" evidence=IEA;ISO
GO:0016887 "ATPase activity" evidence=IDA
GO:0017046 "peptide hormone binding" evidence=IPI
GO:0031597 "cytosolic proteasome complex" evidence=IDA
GO:0031626 "beta-endorphin binding" evidence=IMP
GO:0032461 "positive regulation of protein oligomerization" evidence=IEA;ISO
GO:0042277 "peptide binding" evidence=ISO
GO:0042447 "hormone catabolic process" evidence=IDA
GO:0042803 "protein homodimerization activity" evidence=ISO;IDA
GO:0043130 "ubiquitin binding" evidence=IEA;ISO
GO:0043171 "peptide catabolic process" evidence=TAS
GO:0043559 "insulin binding" evidence=ISO;IMP
GO:0044257 "cellular protein catabolic process" evidence=IDA
GO:0045861 "negative regulation of proteolysis" evidence=IDA
GO:0046872 "metal ion binding" evidence=IEA
GO:0050435 "beta-amyloid metabolic process" evidence=ISO;ISS;IMP
GO:0051260 "protein homooligomerization" evidence=ISO
GO:0051289 "protein homotetramerization" evidence=IDA
GO:0051291 "protein heterooligomerization" evidence=IDA
GO:0051603 "proteolysis involved in cellular protein catabolic process" evidence=ISO;IMP
GO:1901142 "insulin metabolic process" evidence=ISO
GO:1901143 "insulin catabolic process" evidence=IEA;ISO
ZFIN|ZDB-GENE-070410-85 ide "insulin-degrading enzyme" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:96412 Ide "insulin degrading enzyme" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q24K02 IDE "Insulin-degrading enzyme" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RGZ3 IDE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1P6U4 IDE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P14735 IDE "Insulin-degrading enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BTQ0 Gga.21599 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BW46 Gga.21599 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BW52 Gga.21599 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q06010STE23_YEAST3, ., 4, ., 2, 4, ., -0.53040.48830.2239yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.240.691
3rd Layer3.4.24.56LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
COG1025 937 COG1025, Ptr, Secreted/periplasmic Zn-dependent pe 1e-101
PRK15101 961 PRK15101, PRK15101, protease3; Provisional 2e-46
pfam00675149 pfam00675, Peptidase_M16, Insulinase (Peptidase fa 5e-35
COG0612438 COG0612, PqqL, Predicted Zn-dependent peptidases [ 3e-28
TIGR02110 696 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis 1e-20
pfam05193182 pfam05193, Peptidase_M16_C, Peptidase M16 inactive 2e-14
PRK15101 961 PRK15101, PRK15101, protease3; Provisional 1e-12
pfam05193182 pfam05193, Peptidase_M16_C, Peptidase M16 inactive 3e-11
COG1026 978 COG1026, COG1026, Predicted Zn-dependent peptidase 0.004
>gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  323 bits (831), Expect = e-101
 Identities = 139/418 (33%), Positives = 198/418 (47%), Gaps = 101/418 (24%)

Query: 34  GYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVS 93
           G   DP++ PGLAHF EHMLFMG+E YP E  +++FLS+H G  NA T+ + T ++FEV 
Sbjct: 55  GSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNASTAGERTAFYFEVE 114

Query: 94  PDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHD 153
            D LE  LD F+ FFI PLF+  + DRE NAVNSE   N+ +D WR+ Q++  T +P H 
Sbjct: 115 NDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHP 174

Query: 154 YNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDK 213
            ++F TGN ETL   P   G+ V+ EL +FH K YS+N M L I G + LDEL K A D 
Sbjct: 175 LSKFSTGNLETLSDKP---GLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADL 231

Query: 214 FKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTT 273
           F D+ N+    P                               P+P + ++    K +  
Sbjct: 232 FGDIPNRARKIPP-----------------------------IPVPVVTDEQT-GKII-- 259

Query: 274 PEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKD 333
                            ++ P K    L + FPI D                 +  +   
Sbjct: 260 -----------------HIVPAKPRPRLRIYFPIDD----------------NSAKF--- 283

Query: 334 QLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWC 393
                                         +S PD YLSHLIG+E PGSLL+ L+++G  
Sbjct: 284 ------------------------------RSKPDEYLSHLIGNESPGSLLAWLKKQGLI 313

Query: 394 NSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLEL 451
             L  G    +  +  F ++ +LT  G+ H D ++ L FQY+ L+ ++G  ++ F EL
Sbjct: 314 TELSAGLDPISGNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDEL 371

Length = 937
>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional Back     alignment and domain information
>gnl|CDD|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) Back     alignment and domain information
>gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain Back     alignment and domain information
>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional Back     alignment and domain information
>gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain Back     alignment and domain information
>gnl|CDD|223957 COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 471
TIGR02110 696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 100.0
PRK15101 961 protease3; Provisional 100.0
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 100.0
COG1025 937 Ptr Secreted/periplasmic Zn-dependent peptidases, 100.0
KOG0959|consensus 974 100.0
KOG0960|consensus467 100.0
PTZ00432 1119 falcilysin; Provisional 100.0
KOG2067|consensus472 100.0
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 99.94
KOG2019|consensus 998 99.91
PRK15101961 protease3; Provisional 99.89
KOG2583|consensus429 99.88
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 99.87
KOG0961|consensus 1022 99.86
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 99.81
COG1026978 Predicted Zn-dependent peptidases, insulinase-like 99.13
PTZ004321119 falcilysin; Provisional 98.92
KOG2019|consensus998 98.83
KOG0959|consensus974 98.69
COG1025937 Ptr Secreted/periplasmic Zn-dependent peptidases, 98.47
KOG0961|consensus1022 97.54
PF03410 590 Peptidase_M44: Protein G1; InterPro: IPR005072 In 97.33
PHA03081 595 putative metalloprotease; Provisional 96.97
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 94.09
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 93.75
KOG2067|consensus472 90.49
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 82.9
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information 
Probab=100.00  E-value=1.8e-44  Score=391.44  Aligned_cols=345  Identities=22%  Similarity=0.307  Sum_probs=282.9

Q ss_pred             eecCCCcEEEEEeccCCCC-------CCccCCCCCCCCCHHHHHHHHHhcCCCCCCChhHHHHHHHHcCCeeeEEeccce
Q psy15403         13 TWSPEAMQYKQGYLSDPKD-------LPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADH   85 (471)
Q Consensus        13 ~~~~nGl~~~v~~~~~~~~-------~~Gs~~e~~~~~Gla~ll~~ll~~Gt~~~~~~~~L~~~L~~~g~~l~~~t~~d~   85 (471)
                      .-++|||+|.++..++...       ++|+++|+.+.+|++||++||+|+||++++..++|.+.++.+|+++|++|+.|+
T Consensus         3 ~tL~NGLrVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~d~   82 (696)
T TIGR02110         3 ITLPNGLRVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLERT   82 (696)
T ss_pred             EEcCCCCEEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcCCe
Confidence            3578999996555444332       999999999999999999999999999999844799999999999999999999


Q ss_pred             EEEEEEeChhhHHHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHcCCCCCCCCCCCCChhhh
Q psy15403         86 TNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKETL  165 (471)
Q Consensus        86 t~~~~s~~~~~l~~~L~ll~~~l~~P~f~ee~~~~~k~~~~~el~~~~~~p~~~~~~~l~~~~~~~~p~~~~~~Gt~e~I  165 (471)
                      |.|++++++++++.+|+++.+++.+|.|++++|+++|+.+.+|++...++|...+.+.+.+.+|++|||+++..|+.++|
T Consensus        83 T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL  162 (696)
T TIGR02110        83 TAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSL  162 (696)
T ss_pred             EEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCcchHHHHHHHHHhhcccCCeEEEEEcCCCHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCcccccccceecc
Q psy15403        166 ETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTP  245 (471)
Q Consensus       166 ~~it~~~~~~~~edL~~f~~~~y~p~n~tLvVvGd~d~~~l~~lv~k~fg~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (471)
                      ..++.    .+.++|++||++||+|+||+|+|+||++.++++++++++|+.|+.+..+.+....+...            
T Consensus       163 ~~it~----~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~~~p~~~------------  226 (696)
T TIGR02110       163 ALPNT----AFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAPPAPLLR------------  226 (696)
T ss_pred             hCccc----chHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC------------
Confidence            87531    12899999999999999999999999999999999999999998654322111000000            


Q ss_pred             CccccceeeeecCCchhhhhhccCCCCCCCCcCCCCCCccccccCccccccccccccccCCCCchhhhhhccCCcCCCCC
Q psy15403        246 VKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEW  325 (471)
Q Consensus       246 ~~~q~~v~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (471)
                                                                                                      
T Consensus       227 --------------------------------------------------------------------------------  226 (696)
T TIGR02110       227 --------------------------------------------------------------------------------  226 (696)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCcccccceEEEeecCCcceEEEEeecCCCcchhccCchhHHHHhhcCCCCCcHHHHHHHcCcccceeeecCCCCC
Q psy15403        326 TTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSGAK  405 (471)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Lg~~~~~~L~~~lR~~g~~ys~~~~~~~~~~  405 (471)
                               .+.....  ..+..++.+.|..|..... +..++.+++.+||++++|+|+.+||++||+|++++.......
T Consensus       227 ---------~~~~~~~--~~~~~q~~l~~~~p~~~~~-d~~al~lL~~iLg~g~sSrL~~~LRe~GLaysV~s~~~~~~~  294 (696)
T TIGR02110       227 ---------FDRLTLA--GGSEPRLWLLFALAGLPAT-ARDNVTLLCEFLQDEAPGGLLAQLRERGLAESVAATWLYQDA  294 (696)
T ss_pred             ---------CceeEEE--ecCcceEEEEEeecCCCCC-ChHHHHHHHHHhCCCcchHHHHHHHHCCCEEEEEEeccccCC
Confidence                     0000011  1123456666666543221 223689999999999999999999999999999986643334


Q ss_pred             CeeEEEEEEEcCcchhhcHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHhcc---cchhhhhh
Q psy15403        406 GFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQ--GPQEWIFLELFVQIIH---EPCFNILR  465 (471)
Q Consensus       406 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~i~~~--~~~~~~~~~~k~~~i~---~~~~~~~~  465 (471)
                      +.+.|.|++.+++++.++++++++.++++|++|+++  +++.++++++|..=..   ......+|
T Consensus       295 g~~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~~~~~~~~~l~~~r  359 (696)
T TIGR02110       295 GQALLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRRFQTLALSPLAQLR  359 (696)
T ss_pred             CCcEEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhcccChHHHHh
Confidence            456999999997655578999999999999999999  8999999999887433   44444444

In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
>PRK15101 protease3; Provisional Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0959|consensus Back     alignment and domain information
>KOG0960|consensus Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>KOG2067|consensus Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>KOG2019|consensus Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>KOG2583|consensus Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG0961|consensus Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>KOG2019|consensus Back     alignment and domain information
>KOG0959|consensus Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0961|consensus Back     alignment and domain information
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PHA03081 putative metalloprotease; Provisional Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2067|consensus Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
3p7l_A 978 Rat Insulin Degrading Enzyme (Insulysin) Length = 9 1e-107
3p7l_A 978 Rat Insulin Degrading Enzyme (Insulysin) Length = 9 6e-04
3tuv_A 1019 Crystal Structure Of Insulysin With Bound Atp Lengt 1e-107
3tuv_A 1019 Crystal Structure Of Insulysin With Bound Atp Lengt 6e-04
3p7o_A 1019 Rat Insulin Degrading Enzyme (Insulysin) E111f Muta 1e-106
3p7o_A 1019 Rat Insulin Degrading Enzyme (Insulysin) E111f Muta 7e-04
2jg4_A 990 Substrate-Free Ide Structure In Its Closed Conforma 1e-106
2jg4_A 990 Substrate-Free Ide Structure In Its Closed Conforma 6e-04
2g47_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 1e-105
2g47_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 6e-04
3cww_A 990 Crystal Structure Of Ide-Bradykinin Complex Length 1e-105
3qz2_A 990 The Structure Of Cysteine-Free Human Insulin Degrad 1e-105
2wby_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 1e-104
3e4z_A 990 Crystal Structure Of Human Insulin Degrading Enzyme 1e-104
3hgz_A 969 Crystal Structure Of Human Insulin-Degrading Enzyme 1e-104
3e4a_A 1019 Human Ide-Inhibitor Complex At 2.6 Angstrom Resolut 1e-104
1q2l_A 939 Crystal Structure Of Pitrilysin Length = 939 1e-26
1q2l_A 939 Crystal Structure Of Pitrilysin Length = 939 1e-06
3hdi_A421 Crystal Structure Of Bacillus Halodurans Metallo Pe 2e-08
1hr6_B443 Yeast Mitochondrial Processing Peptidase Length = 4 2e-06
1hr7_B443 Yeast Mitochondrial Processing Peptidase Beta-E73q 5e-06
3amj_C437 The Crystal Structure Of The Heterodimer Of M16b Pe 7e-06
3ami_A445 The Crystal Structure Of The M16b Metallopeptidase 8e-06
1bcc_A446 Cytochrome Bc1 Complex From Chicken Length = 446 3e-04
1sqb_A480 Crystal Structure Analysis Of Bovine Bc1 With Azoxy 9e-04
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978 Back     alignment and structure 
Iteration: 1

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/417 (47%), Positives = 256/417 (61%), Gaps = 98/417 (23%)
Query: 34  GYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVS 93
           G LSDP ++PGL+HFCEHMLF+GT+ YP ENEY++FLSEH+G SNA+TS +HTNY+F+VS
Sbjct: 54  GSLSDPPNIPGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVS 113
Query: 94  PDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHD 153
            +HLE  LD F++FF+CPLFDAS  DREVNAV+SEHEKN+ NDAWRL QLEKAT +PKH 
Sbjct: 114 HEHLEGALDRFAQFFLCPLFDASCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHP 173
Query: 154 YNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAXXX 213
           +++FGTGNK TLET P  +GIDVR ELLKFH+ +YSSN+M + +LG+ESLD+L       
Sbjct: 174 FSKFGTGNKYTLETRPNQEGIDVREELLKFHSTYYSSNLMAICVLGRESLDDL------- 226
Query: 214 XXXXXXXXXSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTT 273
                                    T   V    +V                 +NKNV  
Sbjct: 227 -------------------------TNLVVKLFSEV-----------------ENKNVPL 244
Query: 274 PEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKD 333
           PE+  HP+ ++ LK    + P+KD+R+L VTFPIPDLQ+ +K N                
Sbjct: 245 PEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQQYYKSN---------------- 288
Query: 334 QLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWC 393
                                            P +YL HLIGHEGPGSLLSEL+ +GW 
Sbjct: 289 ---------------------------------PGHYLGHLIGHEGPGSLLSELKSKGWV 315
Query: 394 NSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLE 450
           N+LVGG + GA+GF FF + VDLT +G+ H +DI+  +FQYI+ +  +GPQEW+F E
Sbjct: 316 NTLVGGQKEGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQE 372
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978 Back     alignment and structure
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019 Back     alignment and structure
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019 Back     alignment and structure
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019 Back     alignment and structure
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019 Back     alignment and structure
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990 Back     alignment and structure
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990 Back     alignment and structure
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990 Back     alignment and structure
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990 Back     alignment and structure
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex Length = 990 Back     alignment and structure
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading Enzyme Length = 990 Back     alignment and structure
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Insulin Length = 990 Back     alignment and structure
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In Complex With Insulin-Like Growth Factor Ii Length = 990 Back     alignment and structure
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amylin Length = 969 Back     alignment and structure
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution Length = 1019 Back     alignment and structure
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939 Back     alignment and structure
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939 Back     alignment and structure
>pdb|3HDI|A Chain A, Crystal Structure Of Bacillus Halodurans Metallo Peptidase Length = 421 Back     alignment and structure
>pdb|1HR6|B Chain B, Yeast Mitochondrial Processing Peptidase Length = 443 Back     alignment and structure
>pdb|1HR7|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant Length = 443 Back     alignment and structure
>pdb|3AMJ|C Chain C, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 437 Back     alignment and structure
>pdb|3AMI|A Chain A, The Crystal Structure Of The M16b Metallopeptidase Subunit From Sphingomonas Sp. A1 Length = 445 Back     alignment and structure
>pdb|1BCC|A Chain A, Cytochrome Bc1 Complex From Chicken Length = 446 Back     alignment and structure
>pdb|1SQB|A Chain A, Crystal Structure Analysis Of Bovine Bc1 With Azoxystrobin Length = 480 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 1e-114
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 1e-103
3go9_A492 Insulinase family protease; IDP00573, structural g 1e-25
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 1e-25
3eoq_A406 Putative zinc protease; two similar domains of bet 2e-22
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 7e-22
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 3e-21
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 2e-19
3gwb_A434 Peptidase M16 inactive domain family protein; pept 2e-19
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 4e-19
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 8e-19
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 4e-18
3cx5_B352 Cytochrome B-C1 complex subunit 2, mitochondrial; 4e-16
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 7e-16
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 2e-15
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 3e-15
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 3e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 Back     alignment and structure
 Score =  358 bits (919), Expect = e-114
 Identities = 195/429 (45%), Positives = 256/429 (59%), Gaps = 98/429 (22%)

Query: 34  GYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSADHTNYHFEVS 93
           G LSDP ++ GL+HF +HMLF+GT+ YP ENEY++FLSEH+G SNA+TS +HTNY+F+VS
Sbjct: 66  GSLSDPPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVS 125

Query: 94  PDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHD 153
            +HLE  LD F++FF+ PLFD S+ DREVNAV+SEHEKN+ NDAWRL QLEKAT +PKH 
Sbjct: 126 HEHLEGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHP 185

Query: 154 YNRFGTGNKETLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDK 213
           +++FGTGNK TLET P  +GIDVR ELLKFH+ +YSSN+M + +LG+ESLD+L    V  
Sbjct: 186 FSKFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVVVLGRESLDDLTNLVVKL 245

Query: 214 FKDVKNKNVSTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTT 273
           F +V+NKNV  PE+  HP+ ++ LK                                   
Sbjct: 246 FSEVENKNVPLPEFPEHPFQEEHLK----------------------------------- 270

Query: 274 PEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKD 333
                             + P+KD+R+L VT                             
Sbjct: 271 --------------QLYKIVPIKDIRNLYVT----------------------------- 287

Query: 334 QLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWC 393
                               FPIPDLQ+ +KS P +YL HLIGHEGPGSLLSEL+ +GW 
Sbjct: 288 --------------------FPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWV 327

Query: 394 NSLVGGPRSGAKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFV 453
           N+LVGG ++GA+GF FF + VDLT +G+ H +DI+  +FQYI+ +  +GPQEW+F EL  
Sbjct: 328 NTLVGGQKAGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQELKD 387

Query: 454 QIIHEPCFN 462
                  F 
Sbjct: 388 LNAVAFRFK 396
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352 Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query471
3eoq_A406 Putative zinc protease; two similar domains of bet 100.0
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 100.0
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 100.0
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 100.0
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 100.0
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 100.0
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 100.0
3gwb_A434 Peptidase M16 inactive domain family protein; pept 100.0
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 100.0
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 100.0
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 100.0
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 100.0
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 100.0
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 100.0
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 100.0
3go9_A 492 Insulinase family protease; IDP00573, structural g 100.0
3cx5_B352 Cytochrome B-C1 complex subunit 2, mitochondrial; 100.0
1q2l_A939 Protease III; hydrolase; 2.20A {Escherichia coli s 99.91
2fge_A995 Atprep2;, zinc metalloprotease (insulinase family) 99.9
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 99.85
3s5m_A1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 99.74
3ih6_A197 Putative zinc protease; bordetella pertussis toham 99.46
3ih6_A197 Putative zinc protease; bordetella pertussis toham 97.75
3eoq_A406 Putative zinc protease; two similar domains of bet 97.38
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 97.35
3gwb_A434 Peptidase M16 inactive domain family protein; pept 97.26
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 97.25
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 97.17
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 97.14
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 97.13
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 97.03
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 96.93
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 96.7
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 95.74
3go9_A492 Insulinase family protease; IDP00573, structural g 94.32
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
Probab=100.00  E-value=5.3e-48  Score=398.47  Aligned_cols=337  Identities=20%  Similarity=0.228  Sum_probs=289.6

Q ss_pred             CceecCCCcEEEEEeccCCCC-------CCccCCCCCCCCCHHHHHHHHHhcCCCCCCChhHHHHHHHHcCCeeeEEecc
Q psy15403         11 PSTWSPEAMQYKQGYLSDPKD-------LPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSA   83 (471)
Q Consensus        11 ~~~~~~nGl~~~v~~~~~~~~-------~~Gs~~e~~~~~Gla~ll~~ll~~Gt~~~~~~~~L~~~L~~~g~~l~~~t~~   83 (471)
                      ..+-++||++|.+...+....       ++|+++|+.+..|++||++||+++||++++. .++.+.++.+|+.+|++|+.
T Consensus         3 ~~~~L~NGl~v~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ah~lehmlf~Gt~~~~~-~~~~~~l~~~G~~~na~t~~   81 (406)
T 3eoq_A            3 REAELRNGLRVIAEVVPGARSVALGYFVKTGARDETKEESGVSHFLEHMVFKGPEDMDA-LAVNRAFDRMGAQYNAFTSE   81 (406)
T ss_dssp             EEEECTTSCEEEEEECTTCSCEEEEEEESCSGGGSCGGGTTHHHHHHHHHTTCCTTCCH-HHHHHHHHHTTCEEEEEECS
T ss_pred             eeEEcCCCCEEEEEECCCCCeEEEEEEEccccCCCCCCCCCHHHHHHHHHhCCCCCCCH-HHHHHHHHHhCCCccceecC
Confidence            356789999997766655333       9999999999999999999999999999977 69999999999999999999


Q ss_pred             ceEEEEEEeChhhHHHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHcCCCCCCCCCCCCChh
Q psy15403         84 DHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKE  163 (471)
Q Consensus        84 d~t~~~~s~~~~~l~~~L~ll~~~l~~P~f~ee~~~~~k~~~~~el~~~~~~p~~~~~~~l~~~~~~~~p~~~~~~Gt~e  163 (471)
                      ++|.|++++++++++.+|+++.+++ +|.|++++|+++++.+.+|++...++|...+.+.+.+.+|++|||+++..|+++
T Consensus        82 d~t~y~~~~~~~~l~~~l~ll~d~~-~p~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~  160 (406)
T 3eoq_A           82 EATVYYGAVLPEFAYDLLGLFAKLL-RPALREEDFQTEKLVILEEIARYQDRPGFMAYEWARARFFQGHPLGNSVLGTRE  160 (406)
T ss_dssp             SCEEEEEEECGGGHHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCGGGCCSSCCHH
T ss_pred             CeEEEEEEecHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCCCCCcCCHH
Confidence            9999999999999999999999999 999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCCCCcchHHHHHHHHHhhcccCCeEEEEEcCCCHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCccccccccee
Q psy15403        164 TLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNVSTPEWTTHPYGKDQLKTRGYV  243 (471)
Q Consensus       164 ~I~~it~~~~~~~~edL~~f~~~~y~p~n~tLvVvGd~d~~~l~~lv~k~fg~lp~~~~~~~~~~~~~~~~~~~~~~~~~  243 (471)
                      +|.+++       .++|++||++||+|+||+|+|+||+|+++++++++++|+.|+..+.+..   ..+..  ..+....+
T Consensus       161 ~i~~~t-------~~~l~~f~~~~y~p~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~---~~~~~--~~~~~~~~  228 (406)
T 3eoq_A          161 SITALT-------REGMAAYHRRRYLPKNMVLAATGRVDFDRLLAEAERLTEAWPEGEAERA---YPPLT--PAFGVEER  228 (406)
T ss_dssp             HHHHCC-------HHHHHHHHHHHCCGGGEEEEEEESCCHHHHHHHHHHHHTTCCCCCCCCC---CCCCC--CCCEEEEE
T ss_pred             HHhhCC-------HHHHHHHHHHhCCccCEEEEEEcCCCHHHHHHHHHHHhcCCCCCCCCCC---CCCCC--CCCceEEE
Confidence            999999       9999999999999999999999999999999999999999986432211   11110  00111111


Q ss_pred             ccCccccceeeeecCCchhhhhhccCCCCCCCCcCCCCCCccccccCccccccccccccccCCCCchhhhhhccCCcCCC
Q psy15403        244 TPVKDVRSLLVTFPIPDLQEQHKKNKNVTTPEWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKKNKNVTTP  323 (471)
Q Consensus       244 ~~~~~q~~v~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (471)
                      ..+.                                                                            
T Consensus       229 ~~~~----------------------------------------------------------------------------  232 (406)
T 3eoq_A          229 PYEK----------------------------------------------------------------------------  232 (406)
T ss_dssp             ECTT----------------------------------------------------------------------------
T ss_pred             ecCC----------------------------------------------------------------------------
Confidence            1122                                                                            


Q ss_pred             CCCCCCCCcccccceEEEeecCCcceEEEEeecCCCcchhccCchhHHHHhhcCCCCCcHHHHHHHcCcccceeeecCCC
Q psy15403        324 EWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSLLSELRRRGWCNSLVGGPRSG  403 (471)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Lg~~~~~~L~~~lR~~g~~ys~~~~~~~~  403 (471)
                                           ..++.+.+.|+.+...+ .++.++.+++.+|||+++|+|+++||++||+|+++++... 
T Consensus       233 ---------------------~~q~~~~~~~~~~~~~~-~d~~~l~vl~~iLgg~~~srL~~~lre~gl~y~~~s~~~~-  289 (406)
T 3eoq_A          233 ---------------------ARALYLVALFPGVAYQE-EARFPGQVLAHLLGEEGSGRLHFALVDKGLAEVASFGLEE-  289 (406)
T ss_dssp             ---------------------CSSEEEEEEEECCCTTC-TTHHHHHHHHHHHHCTTTSHHHHHTTTTTSEEEEEEEEEE-
T ss_pred             ---------------------ccceEEEEEecCCCCCC-chHHHHHHHHHHhCCCcchHHHHHHHHcCCeeEEEEEecc-
Confidence                                 14455666666554322 3566899999999999999999999999999999988764 


Q ss_pred             CCCeeEEEEEEEcCcchhhcHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcccchhhh
Q psy15403        404 AKGFAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQGPQEWIFLELFVQIIHEPCFNI  463 (471)
Q Consensus       404 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~k~~~i~~~~~~~  463 (471)
                      ..+.|.|.+++.+++   ++++++++.+.++|+.|+++|+++++|+++|++++.....+.
T Consensus       290 ~~~~g~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~~~t~~el~~ak~~l~~~~~~~~  346 (406)
T 3eoq_A          290 ADRAGTFHAYVQADP---ARKGEVLAVLQEELDRLGREGVGEEEVERAKTPLATGLVFAG  346 (406)
T ss_dssp             CSSCEEEEEEEEECG---GGHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCceEEEEEEEeCc---chHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhc
Confidence            466799999999999   678889999999999999999999999999999988776543
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Back     alignment and structure
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Back     alignment and structure
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 471
d1q2la3240 d.185.1.1 (A:264-503) Protease III {Escherichia co 7e-36
d1q2la3240 d.185.1.1 (A:264-503) Protease III {Escherichia co 8e-04
d2fgea4257 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 6e-26
d1q2la4240 d.185.1.1 (A:24-263) Protease III {Escherichia col 2e-21
d1ppja1232 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 4e-20
d1hr6b1222 d.185.1.1 (B:24-245) Mitochondrial processing pept 4e-18
d3cx5b1202 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 8e-17
d3cx5a1213 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 1e-14
d1ppjb1219 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 2e-13
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 8e-12
d1hr6a1220 d.185.1.1 (A:14-233) Mitochondrial processing pept 1e-10
d2fgea1258 d.185.1.1 (A:540-797) Presequence protease 1, PREP 0.003
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

 Score =  130 bits (329), Expect = 7e-36
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 324 EWTTHPYGKDQLKTRGYVTPVKDVRSLLVTFPIPDLQEQHKSGPDNYLSHLIGHEGPGSL 383
           E T       Q     +  P    + L V F I +   + +S  D  +++LIG+  PG+L
Sbjct: 1   EITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTL 60

Query: 384 LSELRRRGWCNSLVGGPRSGAKG-FAFFTVTVDLTLDGINHADDIVELLFQYIKLIHDQG 442
              L+++G    +         G      ++  LT  G+ + D +V  +F Y+ L+ ++G
Sbjct: 61  SDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKG 120

Query: 443 PQEWIFLEL 451
             +  F EL
Sbjct: 121 IDKQYFDEL 129
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219 Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220 Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 258 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query471
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 100.0
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 100.0
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 100.0
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 100.0
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.97
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.97
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 99.96
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 99.95
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 99.74
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 99.62
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 99.48
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.48
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 99.34
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.32
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.15
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 98.84
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 98.24
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 98.21
d2fgea3 268 Presequence protease 1, PREP1 {Thale cress (Arabid 98.14
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 98.12
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 97.89
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 97.82
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 97.78
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 97.14
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 96.46
d3cx5b2150 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 95.97
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 95.7
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 83.14
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Cytochrome bc1 core subunit 1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.9e-33  Score=266.07  Aligned_cols=206  Identities=19%  Similarity=0.237  Sum_probs=193.3

Q ss_pred             CCceecCCCcEEEEEeccCCCC------CCccCCCCCCCCCHHHHHHHHHhcCCCCCCChhHHHHHHHHcCCeeeEEecc
Q psy15403         10 MPSTWSPEAMQYKQGYLSDPKD------LPGYLSDPKDLPGLAHFCEHMLFMGTETYPAENEYNKFLSEHSGYSNAYTSA   83 (471)
Q Consensus        10 ~~~~~~~nGl~~~v~~~~~~~~------~~Gs~~e~~~~~Gla~ll~~ll~~Gt~~~~~~~~L~~~L~~~g~~l~~~t~~   83 (471)
                      ...+-++|||+|.+.....+..      ++|+++|+.+..|++|+++|++++|+.+++. .++.+.+...|+.+++.++.
T Consensus        13 ~~~~~L~NGl~V~~~~~~~~~~~i~l~~~~Gs~~e~~~~~G~a~ll~~~~~~g~~~~~~-~~~~~~l~~~g~~~~~~~~~   91 (232)
T d1ppja1          13 TQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG-NALEKEVESMGAHLNAYSTR   91 (232)
T ss_dssp             CEEEECTTSCEEEEEECCCSEEEEEEEESCSGGGCCTTTTTHHHHHHHHTTSCBSSSTT-THHHHHHHHTTCEEEEEECS
T ss_pred             cEEEECCCCCEEEEEcCCCCEEEEEEEEcccccccCCCCcccHHHHHHHHhcCCccccc-hhHHHHHhhhcccccccccc
Confidence            4567899999986554333333      9999999999999999999999999999998 69999999999999999999


Q ss_pred             ceEEEEEEeChhhHHHHHHHHHHhhhCCCCChHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHcCCCCCCCCCCCCChh
Q psy15403         84 DHTNYHFEVSPDHLEKTLDIFSKFFICPLFDASSTDREVNAVNSEHEKNIPNDAWRLDQLEKATCDPKHDYNRFGTGNKE  163 (471)
Q Consensus        84 d~t~~~~s~~~~~l~~~L~ll~~~l~~P~f~ee~~~~~k~~~~~el~~~~~~p~~~~~~~l~~~~~~~~p~~~~~~Gt~e  163 (471)
                      +++.|++++++++++.+|+++++++.+|.|++++|++++..+..+++.+.++|...+.+.++.++|++||++++..|+.+
T Consensus        92 ~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~  171 (232)
T d1ppja1          92 EHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSE  171 (232)
T ss_dssp             SCEEEEEEEEGGGHHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCHH
T ss_pred             hhhheeccchhHHHHHHHHHHHHHhhhccccHHHhhhhhceeecchhhhhhhHHHHHHHHHHHHhccCCcccccCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCCCCcchHHHHHHHHHhhcccCCeEEEEEcCCCHHHHHHHHHHhhccCCCCCCC
Q psy15403        164 TLETIPKSKGIDVRNELLKFHNKWYSSNIMGLAILGKESLDELEKYAVDKFKDVKNKNVS  223 (471)
Q Consensus       164 ~I~~it~~~~~~~~edL~~f~~~~y~p~n~tLvVvGd~d~~~l~~lv~k~fg~lp~~~~~  223 (471)
                      +|.+++       .++|++||+++|+|+||+|+|+||+|+++++++++++||.||+....
T Consensus       172 ~l~~it-------~e~l~~f~~~~y~~~n~~l~i~Gd~~~~~l~~l~~~~fg~l~~~~~~  224 (232)
T d1ppja1         172 NVRKLS-------RADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDE  224 (232)
T ss_dssp             HHHHCC-------HHHHHHHHHHHCCGGGEEEEEEESCCHHHHHHHHHHHHTTSCSCCCS
T ss_pred             HHHHHh-------HHHHHHHHHHcCCcCCEEEEEEeCCCHHHHHHHHHHHHhcCCCCCCC
Confidence            999999       99999999999999999999999999999999999999999977543
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure