Psyllid ID: psy15404
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 244 | ||||||
| 307182327 | 1661 | STE20-like serine/threonine-protein kina | 1.0 | 0.146 | 0.653 | 1e-91 | |
| 307195019 | 1559 | STE20-like serine/threonine-protein kina | 1.0 | 0.156 | 0.643 | 4e-90 | |
| 332022213 | 1701 | STE20-like serine/threonine-protein kina | 1.0 | 0.143 | 0.64 | 1e-89 | |
| 242021377 | 1307 | polo kinase kinase, putative [Pediculus | 1.0 | 0.186 | 0.644 | 4e-89 | |
| 156552971 | 1527 | PREDICTED: STE20-like serine/threonine-p | 0.995 | 0.159 | 0.634 | 4e-87 | |
| 383861055 | 1552 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.157 | 0.62 | 1e-84 | |
| 383861057 | 1642 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.148 | 0.62 | 2e-84 | |
| 328783366 | 1602 | PREDICTED: hypothetical protein LOC40851 | 1.0 | 0.152 | 0.62 | 7e-84 | |
| 380016388 | 1551 | PREDICTED: LOW QUALITY PROTEIN: serine/t | 1.0 | 0.157 | 0.616 | 3e-83 | |
| 340725365 | 1598 | PREDICTED: STE20-like serine/threonine-p | 1.0 | 0.152 | 0.613 | 7e-83 |
| >gi|307182327|gb|EFN69609.1| STE20-like serine/threonine-protein kinase [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 196/300 (65%), Positives = 216/300 (72%), Gaps = 56/300 (18%)
Query: 1 AEIQQEAELRLASKKIRSEQERELKEFRESQKQEMRLLKQEVDLMPKDRRKSMFKDRKEK 60
AE QQE +LRLASKKIRSEQERELK+FRE KQE+RLLKQE+DLMPKD+RKS FK RKEK
Sbjct: 1217 AEAQQEVDLRLASKKIRSEQERELKQFREGLKQELRLLKQEIDLMPKDKRKSAFKIRKEK 1276
Query: 61 LETE---------------HE--------------------------------------- 66
LE E HE
Sbjct: 1277 LEAEHEEREKLFLEKLNESHEISLRRLSDSHREKIALMERQFLQQKQQLMRGREAAIWEQ 1336
Query: 67 ERRQIHERQQHAKKQLKDGFFLQRHQMLIRHDKELEQLKRMNQRKIEELTKKQTIEKRAL 126
E RQIHERQQ KKQLKD FFLQRHQMLIRH+KELEQ+KRMNQRK EEL K+QT+E+R L
Sbjct: 1337 EERQIHERQQLLKKQLKDIFFLQRHQMLIRHEKELEQMKRMNQRKEEELIKRQTVERRNL 1396
Query: 127 PKRIRSEMKIREQMFRQSMRISSSST--PDPEVEREKLKKFQETEKKRYRAETQRFELKH 184
PKRIR+EMK RE MFR+SMRIS SS PDP+ EREKLKKFQE EKKRYRAE QRFELKH
Sbjct: 1397 PKRIRNEMKAREMMFRESMRISMSSVLAPDPDAEREKLKKFQENEKKRYRAEQQRFELKH 1456
Query: 185 QKQLEELKAQCETNIKELEQLQNEKRKMLMEHENMKLKEQEEFYSKELKEWKAQLKPRKQ 244
+QLEE++AQ + IKELEQLQNEKRKMLMEHE +KLKEQEE Y KE++EWKAQLKPRKQ
Sbjct: 1457 SRQLEEVRAQSDATIKELEQLQNEKRKMLMEHETLKLKEQEEAYGKEIREWKAQLKPRKQ 1516
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307195019|gb|EFN77087.1| STE20-like serine/threonine-protein kinase [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|332022213|gb|EGI62528.1| STE20-like serine/threonine-protein kinase [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|242021377|ref|XP_002431121.1| polo kinase kinase, putative [Pediculus humanus corporis] gi|212516370|gb|EEB18383.1| polo kinase kinase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|156552971|ref|XP_001603525.1| PREDICTED: STE20-like serine/threonine-protein kinase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|383861055|ref|XP_003706002.1| PREDICTED: uncharacterized protein LOC100883185 isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|383861057|ref|XP_003706003.1| PREDICTED: uncharacterized protein LOC100883185 isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|328783366|ref|XP_392064.4| PREDICTED: hypothetical protein LOC408519 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|380016388|ref|XP_003692167.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase 10-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|340725365|ref|XP_003401041.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 1 [Bombus terrestris] gi|340725367|ref|XP_003401042.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 2 [Bombus terrestris] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 244 | ||||||
| FB|FBgn0035001 | 1703 | slik "Sterile20-like kinase" [ | 0.676 | 0.096 | 0.640 | 2.9e-51 | |
| RGD|3780 | 1206 | Slk "STE20-like kinase" [Rattu | 0.967 | 0.195 | 0.412 | 1.1e-44 | |
| UNIPROTKB|O08815 | 1206 | Slk "STE20-like serine/threoni | 0.967 | 0.195 | 0.412 | 1.1e-44 | |
| UNIPROTKB|J9P499 | 1211 | SLK "Uncharacterized protein" | 0.967 | 0.194 | 0.404 | 4e-44 | |
| UNIPROTKB|F1S5P2 | 1206 | SLK "Uncharacterized protein" | 0.967 | 0.195 | 0.400 | 2.2e-43 | |
| UNIPROTKB|E1BQV7 | 1213 | E1BQV7 "Uncharacterized protei | 0.979 | 0.197 | 0.414 | 2.3e-43 | |
| MGI|MGI:103241 | 1233 | Slk "STE20-like kinase" [Mus m | 0.963 | 0.190 | 0.413 | 2.6e-43 | |
| UNIPROTKB|G3X696 | 1240 | SLK "Uncharacterized protein" | 0.963 | 0.189 | 0.409 | 4.4e-43 | |
| UNIPROTKB|Q9H2G2 | 1235 | SLK "STE20-like serine/threoni | 0.963 | 0.190 | 0.409 | 5.5e-43 | |
| UNIPROTKB|E2RFZ4 | 1242 | SLK "Uncharacterized protein" | 0.963 | 0.189 | 0.409 | 5.6e-43 |
| FB|FBgn0035001 slik "Sterile20-like kinase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 546 (197.3 bits), Expect = 2.9e-51, P = 2.9e-51
Identities = 107/167 (64%), Positives = 138/167 (82%)
Query: 78 AKKQLKDGFFLQRHQMLIRHDKELEQLKRMNQRKIEELTKKQTIEKRALPKRIRSEMKIR 137
+K+ +K+ F+QRHQM+IRH+KEL+Q+KRM QRK E++ KKQT+EKRALPKRIR+E K R
Sbjct: 1129 SKRHVKELCFMQRHQMIIRHEKELDQVKRMLQRKEEDMVKKQTMEKRALPKRIRAERKAR 1188
Query: 138 EQMFRQSMRISSSSTPDPEVEREKLKKFQETEKKRYRAETQRFELKHQKQLEELKAQCET 197
+ MFR+S+RIS++ DPE+ER++LKKFQE EKKRY E +RFE+KHQKQLEEL+A E+
Sbjct: 1189 DLMFRESLRISTNL--DPEIERDRLKKFQEQEKKRYMQEERRFEVKHQKQLEELRATRES 1246
Query: 198 NIKELEQLQNEKRKMLMEHENMKLKEQEEFYSKELKEWKAQLKPRKQ 244
IKELEQLQNEKR+ L+EHE+ KL E +E EL+EW+ QL PRKQ
Sbjct: 1247 AIKELEQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQ 1293
|
|
| RGD|3780 Slk "STE20-like kinase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O08815 Slk "STE20-like serine/threonine-protein kinase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9P499 SLK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S5P2 SLK "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BQV7 E1BQV7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:103241 Slk "STE20-like kinase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G3X696 SLK "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9H2G2 SLK "STE20-like serine/threonine-protein kinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RFZ4 SLK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 244 | |||
| pfam12474 | 142 | pfam12474, PKK, Polo kinase kinase | 3e-09 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.002 | |
| TIGR03319 | 514 | TIGR03319, RNase_Y, ribonuclease Y | 0.003 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 0.004 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 0.004 |
| >gnl|CDD|204935 pfam12474, PKK, Polo kinase kinase | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-09
Identities = 77/145 (53%), Positives = 101/145 (69%), Gaps = 4/145 (2%)
Query: 74 RQQHAKKQLKDGFFLQRHQMLIRHDKELEQLKRMNQRKIEELTKKQTIEKRALPKRIRSE 133
+ Q K+QLKD FFL+R Q+L RH+KELEQL+R +R IE+L ++QT E R LPKRIR+E
Sbjct: 1 KHQLQKEQLKDRFFLERTQLLKRHEKELEQLERQQKRTIEKLEQRQTQELRRLPKRIRAE 60
Query: 134 MKIREQMFRQSMRISSSSTPDPEVEREKLKKFQETEKKRYRAETQRFELKHQKQLEELKA 193
K R +MF++S++I + E EKL +FQE EKKR +AE + E KHQKQ E A
Sbjct: 61 QKTRLKMFKESLKIEKKE---LKQEVEKLPRFQEQEKKRMKAEKEEQEQKHQKQEREFLA 117
Query: 194 QCETNIKE-LEQLQNEKRKMLMEHE 217
+ E N++E L+QLQNEKR L E E
Sbjct: 118 KQEENLEEALQQLQNEKRHELAETE 142
|
This domain family is found in eukaryotes, and is approximately 140 amino acids in length. The family is found in association with pfam00069. Polo-like kinase 1 (Plx1) is essential during mitosis for the activation of Cdc25C, for spindle assembly, and for cyclin B degradation. This family is Polo kinase kinase (PKK) which phosphorylates Polo kinase and Polo-like kinase to activate them. PKK is a serine/threonine kinase. Length = 142 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
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| >gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y | Back alignment and domain information |
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| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
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| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 244 | |||
| KOG0579|consensus | 1187 | 100.0 | ||
| PF12474 | 142 | PKK: Polo kinase kinase ; InterPro: IPR022165 This | 100.0 | |
| PF12474 | 142 | PKK: Polo kinase kinase ; InterPro: IPR022165 This | 99.2 | |
| KOG0577|consensus | 948 | 97.81 |
| >KOG0579|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-82 Score=627.99 Aligned_cols=242 Identities=47% Similarity=0.719 Sum_probs=236.8
Q ss_pred CcchHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcHHHhhHHHHHHHHHHHHHHHHH------------
Q psy15404 1 AEIQQEAELRLASKKIRSEQERELKEFRESQKQEMRLLKQEVDLMPKDRRKSMFKDRKEKLETEHEER------------ 68 (244)
Q Consensus 1 ~Eq~~~~~lr~~~Krik~eQekel~~f~e~LK~~~Ke~K~ev~~~pk~~Rk~~~k~rke~~~~~~~~~------------ 68 (244)
+|++|+.+||+++|||+.+|||||.+|++.||+++|++|+||.+||+.+|||++++|+++++.+++-.
T Consensus 857 ~Eq~h~~rlR~eakRir~EQekd~~~Fqe~LK~~kKe~k~e~~~l~k~qrkdalkqr~eq~~~~~ql~ekdFv~kqqq~l 936 (1187)
T KOG0579|consen 857 TEQAHEHRLRNEAKRIRIEQEKDMRAFQERLKQEKKEFKQELTMLSKVQRKDALKQRKEQIEIEHQLKEKDFVMKQQQNL 936 (1187)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999877532
Q ss_pred ------------------------------------------hhHHHHHHHHHHhhHHHHHHHHHHHHHhhHHHHHHHHh
Q psy15404 69 ------------------------------------------RQIHERQQHAKKQLKDGFFLQRHQMLIRHDKELEQLKR 106 (244)
Q Consensus 69 ------------------------------------------rhl~EkhqL~KqQlKdqffLQRhQll~RHeKE~Eqm~r 106 (244)
+||+|+|||+|+||||+|||||||||+||+||++||+|
T Consensus 937 e~~lkrm~~~~k~ema~iErecLm~Kq~LlRarEaaiWElEe~qlqEkhqL~kqqlKDqYflqRhqlL~rHekE~eQmqr 1016 (1187)
T KOG0579|consen 937 EAMLKRMAEKHKEEMASIERECLMQKQNLLRAREAAIWELEEKQLQEKHQLHKQQLKDQYFLQRHQLLARHEKEMEQMQR 1016 (1187)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhcchhhhhhHHHHHHHhHhhhhccCCCCCChHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Q psy15404 107 MNQRKIEELTKKQTIEKRALPKRIRSEMKIREQMFRQSMRISSSSTPDPEVEREKLKKFQETEKKRYRAETQRFELKHQK 186 (244)
Q Consensus 107 ~nqr~~EeLk~~q~~Ek~rLPK~qRsE~KtR~aMfKkSLrI~~~~~~~~~~~rekiKqF~~qE~kRqk~E~~~q~~Khe~ 186 (244)
||||++|+|+++|++||++||||+|||+||||||||+|||||+++|++++ ||+||+|.+||++|++||+..|++||+|
T Consensus 1017 ynQr~ie~Lk~rqtqerarLPKiqRSE~KTRmaMfKkSLrIn~~~s~ae~--rekIkqF~~QEekRqk~er~~q~qKhen 1094 (1187)
T KOG0579|consen 1017 YNQREIEDLKRRQTQERARLPKIQRSETKTRMAMFKKSLRINANMSNAEM--REKIKQFDEQEEKRQKAEREDQDQKHEN 1094 (1187)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhhhHHHHHHHHHheeccCCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988 9999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCC
Q psy15404 187 QLEELKAQCETNIKELEQLQNEKRKMLMEHENMKLKEQEEFYSKELKEWKAQLKPRKQ 244 (244)
Q Consensus 187 ql~el~~q~eanirEL~QlQNEK~~~LvEhEt~KLK~lDe~h~~elkeWre~L~pRKk 244 (244)
||++|+++|++||+||.||||||||+||||||+|||+||+.|..+.+.|+++|+|||.
T Consensus 1095 qmrdl~~qce~ni~EL~qlQNEKchlLvEhEtqklKelde~h~~~~~~w~e~l~~rk~ 1152 (1187)
T KOG0579|consen 1095 QMRDLKEQCEENIIELDQLQNEKCHLLVEHETQKLKELDEKHHEMRELWQENLIARKT 1152 (1187)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999984
|
|
| >PF12474 PKK: Polo kinase kinase ; InterPro: IPR022165 This domain family is found in eukaryotes, and is approximately 140 amino acids in length | Back alignment and domain information |
|---|
| >PF12474 PKK: Polo kinase kinase ; InterPro: IPR022165 This domain family is found in eukaryotes, and is approximately 140 amino acids in length | Back alignment and domain information |
|---|
| >KOG0577|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 244 | |||
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 8e-08 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 1e-06 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 2e-07 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 1e-06 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 2e-04 | |
| 1g8x_A | 1010 | Myosin II heavy chain fused to alpha-actinin 3; mo | 4e-06 |
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 8e-08
Identities = 37/233 (15%), Positives = 81/233 (34%), Gaps = 15/233 (6%)
Query: 2 EIQQEAELRLASKKIRSEQERELKEFRESQKQEMRLLKQEVDLMPKDRRKSMFKDRKEKL 61
++ + ++ L K Q+ ++ R LK V L RR ++E
Sbjct: 853 LVRNKYQMMLREHKSIIIQKHVRGW--LARVHYHRTLKAIVYLQCCYRRM---MAKRELK 907
Query: 62 ETEHEERRQIHERQQHAKKQLKDGFFLQRHQMLIRHDKELEQLKRMNQRKIEELTKKQTI 121
+ + E R ++ H + K ++ + K L + + T+K
Sbjct: 908 KLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRS 967
Query: 122 EKRALPKRIRSEMKIREQMFRQSMRISSSSTPDPEVEREKLKKFQETEKKRYRAETQRFE 181
+ L ++ I+ + + EK + +K ++ E E
Sbjct: 968 DVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSE 1027
Query: 182 LKH-----QKQLEELKAQCETNIKELE-----QLQNEKRKMLMEHENMKLKEQ 224
LK + + EEL + KE+ +L E +++ ++ + +L+ Q
Sbjct: 1028 LKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLNDERLRYQ 1080
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 244 | |||
| 1jad_A | 251 | PLC-beta, phospholipase C beta; alpha helical coil | 90.39 |
| >1jad_A PLC-beta, phospholipase C beta; alpha helical coiled coil, hydrolase; 2.40A {Meleagris gallopavo} SCOP: h.4.10.1 | Back alignment and structure |
|---|
Probab=90.39 E-value=2.7 Score=37.74 Aligned_cols=54 Identities=26% Similarity=0.232 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhHHHHHH-----------HHHHHHhhHHHHHHHHHHHHHHHH
Q psy15404 182 LKHQKQLEELKAQCETNIKELEQLQNEKRKM-----------LMEHENMKLKEQEEFYSKELKEWK 236 (244)
Q Consensus 182 ~Khe~ql~el~~q~eanirEL~QlQNEK~~~-----------LvEhEt~KLK~lDe~h~~elkeWr 236 (244)
..|..||..|.+.||.++.||...|.=|+.= ..|.|. .++++...|..++=+-+
T Consensus 119 e~Q~~QmK~Lk~~~ErE~KELkk~q~kks~e~i~e~~~ktK~K~e~Er-~~rEin~s~ike~veer 183 (251)
T 1jad_A 119 EKQIAELKALKESSESNIKDIKKKLEAKRLDRIQVMMRSTSDKAAQER-LKKEINNSHIQEVVQTI 183 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999988755432 122222 35667777776665444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00