Psyllid ID: psy1547

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGLSFSLMPT
ccccccccccccccEEEEcccccccccccccEEEEEEEccEEEEEEccccccHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHHHHHcccccccccccccccccHHHcccccccccccEEcccccEEEEccEEEEEEcccccccccEEEEEccccEEEEccccccccccccccHHHHHHHHHHHHcccccEEEccccccccccHHHHcccc
cccccccHHHccHHEEEEEcccccccEEccccEEEEEcccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHccccccccccccccccccHHcccccccccccEEcccccEEEEccEEEEEEEccccccccEEEEEccccEEEEccEEEcccccccccHHHHHHHHHHHHcccccEEcccccccccccHHHccccc
msakipnvsqLSSRVIRVLgmnpgpmtlqgtntyilgtgsrrllldtgepdHMEYIENLKQVLNKESISLEHIVLSHwhndhvgglkdifehinpdsaTIWKFKgtekdeaqatdfvpenktvqtltdgqllkveGATLrvihtpghttDHIVLKLeeenvvfsgdtilgeGTTVFSDLISYIESLRRIrslkpdiiypahgpvvevglsfslmpt
msakipnvsqlSSRVIRVLGmnpgpmtlqgtntyilgTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAqatdfvpenktvqtltdgqlLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKpdiiypahgpvveVGLSFSLMPT
MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGLSFSLMPT
**************VIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTE******TDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGLSF*****
***KIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGLSFSLM**
**********LSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGLSFSLMPT
***KIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVG********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEVGLSFSLMPT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query216 2.2.26 [Sep-21-2011]
Q6NYF0289 Beta-lactamase-like prote yes N/A 0.935 0.698 0.538 2e-59
Q53H82288 Beta-lactamase-like prote yes N/A 0.939 0.704 0.536 2e-58
Q561R9288 Beta-lactamase-like prote yes N/A 0.939 0.704 0.521 2e-58
Q99KR3288 Beta-lactamase-like prote yes N/A 0.939 0.704 0.521 5e-58
Q1LZ83288 Beta-lactamase-like prote yes N/A 0.939 0.704 0.521 8e-58
Q5XGR8287 Beta-lactamase-like prote N/A N/A 0.907 0.682 0.539 2e-55
Q0V9A9289 Beta-lactamase-like prote yes N/A 0.916 0.685 0.524 5e-55
Q9VLS9292 Beta-lactamase-like prote yes N/A 0.916 0.678 0.504 3e-51
Q95Q18295 Beta-lactamase-like prote no N/A 0.879 0.644 0.5 4e-49
B0TXY0252 Hydroxyacylglutathione hy yes N/A 0.652 0.559 0.293 4e-12
>sp|Q6NYF0|LACB2_DANRE Beta-lactamase-like protein 2 OS=Danio rerio GN=lactb2 PE=2 SV=1 Back     alignment and function desciption
 Score =  228 bits (582), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/206 (53%), Positives = 145/206 (70%), Gaps = 4/206 (1%)

Query: 1   MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLK 60
           MSA IP + QLS+RV+RVLG NPGPMTLQGTNTY++GTG RR+L+D GE    EYI +L+
Sbjct: 1   MSAVIPRIEQLSARVVRVLGCNPGPMTLQGTNTYLVGTGRRRVLIDAGERAVPEYIVSLR 60

Query: 61  QVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSA-TIWKFKGTEKDEAQATDFVPE 119
           + L +   S++HI+++HWH+DH GG++DI  H N D+   + K       E    D   +
Sbjct: 61  EALKQHDTSIQHIIVTHWHHDHTGGVQDILAHFNTDAELRVSKLPRCPPQEEIIGD---D 117

Query: 120 NKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDL 179
            K    L DG +++ EGATLRV+ TPGHT DH+ L LEEE  VFSGD ILGEGT VF DL
Sbjct: 118 KKKYSYLNDGDVIQTEGATLRVLFTPGHTDDHMALLLEEEQAVFSGDCILGEGTAVFEDL 177

Query: 180 ISYIESLRRIRSLKPDIIYPAHGPVV 205
             Y++SL+++ S+K D+IYP HGPVV
Sbjct: 178 HDYMKSLQKLLSIKADLIYPGHGPVV 203

Danio rerio (taxid: 7955)
EC: 3EC: .EC: -EC: .EC: -EC: .EC: -
>sp|Q53H82|LACB2_HUMAN Beta-lactamase-like protein 2 OS=Homo sapiens GN=LACTB2 PE=1 SV=2 Back     alignment and function description
>sp|Q561R9|LACB2_RAT Beta-lactamase-like protein 2 OS=Rattus norvegicus GN=Lactb2 PE=2 SV=1 Back     alignment and function description
>sp|Q99KR3|LACB2_MOUSE Beta-lactamase-like protein 2 OS=Mus musculus GN=Lactb2 PE=1 SV=1 Back     alignment and function description
>sp|Q1LZ83|LACB2_BOVIN Beta-lactamase-like protein 2 OS=Bos taurus GN=LACTB2 PE=2 SV=1 Back     alignment and function description
>sp|Q5XGR8|LACB2_XENLA Beta-lactamase-like protein 2 OS=Xenopus laevis GN=lactb2 PE=2 SV=1 Back     alignment and function description
>sp|Q0V9A9|LACB2_XENTR Beta-lactamase-like protein 2 OS=Xenopus tropicalis GN=lactb2 PE=2 SV=1 Back     alignment and function description
>sp|Q9VLS9|LACB2_DROME Beta-lactamase-like protein 2 homolog OS=Drosophila melanogaster GN=CG12375 PE=1 SV=1 Back     alignment and function description
>sp|Q95Q18|LACB2_CAEEL Beta-lactamase-like protein 2 homolog OS=Caenorhabditis elegans GN=Y53F4B.39 PE=3 SV=1 Back     alignment and function description
>sp|B0TXY0|GLO2_FRAP2 Hydroxyacylglutathione hydrolase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=gloB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query216
91083175287 PREDICTED: similar to metallo-beta-lacta 0.921 0.693 0.558 7e-60
427783629278 Hypothetical protein [Rhipicephalus pulc 0.902 0.701 0.565 2e-59
417398390288 Putative beta-lactamase-like protein 2 [ 0.939 0.704 0.560 7e-59
118783660291 AGAP004236-PA [Anopheles gambiae str. PE 0.916 0.680 0.544 2e-58
241744861277 conserved hypothetical protein [Ixodes s 0.888 0.693 0.567 2e-58
126321284288 PREDICTED: beta-lactamase-like protein 2 0.939 0.704 0.526 4e-58
291388109288 PREDICTED: lactamase, beta 2 [Oryctolagu 0.935 0.701 0.563 4e-58
410987267288 PREDICTED: beta-lactamase-like protein 2 0.939 0.704 0.551 6e-58
340377879298 PREDICTED: beta-lactamase-like protein 2 0.916 0.664 0.556 7e-58
198436032282 PREDICTED: similar to lactamase, beta 2 0.930 0.712 0.538 7e-58
>gi|91083175|ref|XP_972331.1| PREDICTED: similar to metallo-beta-lactamase, putative [Tribolium castaneum] gi|270006978|gb|EFA03426.1| hypothetical protein TcasGA2_TC013413 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  236 bits (601), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 115/206 (55%), Positives = 147/206 (71%), Gaps = 7/206 (3%)

Query: 1   MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLK 60
           M+A IP V++LS+R+IRVLG NPG MTLQGTNTYI+GTG RR+L+DTG+ D  +YI +LK
Sbjct: 1   MAAVIPAVTKLSARIIRVLGCNPGIMTLQGTNTYIIGTGKRRILVDTGDADVPQYINHLK 60

Query: 61  QVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSAT-IWKFKGTEKDEAQATDFVPE 119
            VL  E I L HI +SHWH+DH+GGL D+ +  +    T +WK+  +E +       +P+
Sbjct: 61  SVLKHEDIDLAHIFISHWHHDHIGGLLDVLDIKDKTKYTQVWKYPRSEGES------LPD 114

Query: 120 NKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDL 179
              +  L DGQ   VEGATLRV+HTPGHTTDHIVL L EEN VFSGD +LGEGT VF DL
Sbjct: 115 GCNIDFLKDGQEFTVEGATLRVVHTPGHTTDHIVLHLVEENAVFSGDCVLGEGTAVFEDL 174

Query: 180 ISYIESLRRIRSLKPDIIYPAHGPVV 205
             Y+ SL+ I  L+P ++YP HG V+
Sbjct: 175 YDYMNSLQEIADLEPAVVYPGHGNVI 200

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|427783629|gb|JAA57266.1| Hypothetical protein [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|417398390|gb|JAA46228.1| Putative beta-lactamase-like protein 2 [Desmodus rotundus] Back     alignment and taxonomy information
>gi|118783660|ref|XP_313152.3| AGAP004236-PA [Anopheles gambiae str. PEST] gi|116128975|gb|EAA08647.3| AGAP004236-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|241744861|ref|XP_002405470.1| conserved hypothetical protein [Ixodes scapularis] gi|215505797|gb|EEC15291.1| conserved hypothetical protein [Ixodes scapularis] Back     alignment and taxonomy information
>gi|126321284|ref|XP_001378517.1| PREDICTED: beta-lactamase-like protein 2-like [Monodelphis domestica] Back     alignment and taxonomy information
>gi|291388109|ref|XP_002710510.1| PREDICTED: lactamase, beta 2 [Oryctolagus cuniculus] Back     alignment and taxonomy information
>gi|410987267|ref|XP_003999926.1| PREDICTED: beta-lactamase-like protein 2 [Felis catus] Back     alignment and taxonomy information
>gi|340377879|ref|XP_003387456.1| PREDICTED: beta-lactamase-like protein 2-like [Amphimedon queenslandica] Back     alignment and taxonomy information
>gi|198436032|ref|XP_002127206.1| PREDICTED: similar to lactamase, beta 2 [Ciona intestinalis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query216
ZFIN|ZDB-GENE-040426-2257289 zgc:77065 "zgc:77065" [Danio r 0.935 0.698 0.538 1.2e-56
UNIPROTKB|E2QXB6288 LACTB2 "Uncharacterized protei 0.935 0.701 0.543 6.8e-56
UNIPROTKB|Q53H82288 LACTB2 "Beta-lactamase-like pr 0.930 0.697 0.545 1.4e-55
RGD|1307876288 Lactb2 "lactamase, beta 2" [Ra 0.930 0.697 0.541 1.4e-55
UNIPROTKB|E1BZM4288 LACTB2 "Uncharacterized protei 0.935 0.701 0.548 2.9e-55
UNIPROTKB|Q1LZ83288 LACTB2 "Beta-lactamase-like pr 0.939 0.704 0.536 3.7e-55
MGI|MGI:2442551288 Lactb2 "lactamase, beta 2" [Mu 0.930 0.697 0.526 7.8e-55
UNIPROTKB|F1RU12288 LACTB2 "Uncharacterized protei 0.939 0.704 0.536 9.9e-55
UNIPROTKB|H9KYS9249 H9KYS9 "Uncharacterized protei 0.916 0.795 0.543 3e-53
FB|FBgn0031987292 CG12375 [Drosophila melanogast 0.930 0.688 0.497 1.2e-49
ZFIN|ZDB-GENE-040426-2257 zgc:77065 "zgc:77065" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 111/206 (53%), Positives = 145/206 (70%)

Query:     1 MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLK 60
             MSA IP + QLS+RV+RVLG NPGPMTLQGTNTY++GTG RR+L+D GE    EYI +L+
Sbjct:     1 MSAVIPRIEQLSARVVRVLGCNPGPMTLQGTNTYLVGTGRRRVLIDAGERAVPEYIVSLR 60

Query:    61 QVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSAT-IWKFKGTEKDEAQATDFVPE 119
             + L +   S++HI+++HWH+DH GG++DI  H N D+   + K       E    D   +
Sbjct:    61 EALKQHDTSIQHIIVTHWHHDHTGGVQDILAHFNTDAELRVSKLPRCPPQEEIIGD---D 117

Query:   120 NKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDL 179
              K    L DG +++ EGATLRV+ TPGHT DH+ L LEEE  VFSGD ILGEGT VF DL
Sbjct:   118 KKKYSYLNDGDVIQTEGATLRVLFTPGHTDDHMALLLEEEQAVFSGDCILGEGTAVFEDL 177

Query:   180 ISYIESLRRIRSLKPDIIYPAHGPVV 205
               Y++SL+++ S+K D+IYP HGPVV
Sbjct:   178 HDYMKSLQKLLSIKADLIYPGHGPVV 203
GO:0016787 "hydrolase activity" evidence=IEA
GO:0005575 "cellular_component" evidence=ND
GO:0046872 "metal ion binding" evidence=IEA
UNIPROTKB|E2QXB6 LACTB2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q53H82 LACTB2 "Beta-lactamase-like protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1307876 Lactb2 "lactamase, beta 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BZM4 LACTB2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q1LZ83 LACTB2 "Beta-lactamase-like protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2442551 Lactb2 "lactamase, beta 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1RU12 LACTB2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|H9KYS9 H9KYS9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0031987 CG12375 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q1LZ83LACB2_BOVIN3, ., -, ., -, ., -0.52190.93980.7048yesN/A
Q6NYF0LACB2_DANRE3, ., -, ., -, ., -0.53880.93510.6989yesN/A
Q9VLS9LACB2_DROME3, ., -, ., -, ., -0.50480.91660.6780yesN/A
Q99KR3LACB2_MOUSE3, ., -, ., -, ., -0.52190.93980.7048yesN/A
Q53H82LACB2_HUMAN3, ., -, ., -, ., -0.53650.93980.7048yesN/A
Q561R9LACB2_RAT3, ., -, ., -, ., -0.52190.93980.7048yesN/A
Q0V9A9LACB2_XENTR3, ., -, ., -, ., -0.52470.91660.6851yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!
3rd Layer3.5.2.6LOW CONFIDENCE prediction!
3rd Layer3.5.20.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
smart00849177 smart00849, Lactamase_B, Metallo-beta-lactamase su 4e-37
COG0491252 COG0491, GloB, Zn-dependent hydrolases, including 2e-29
pfam00753148 pfam00753, Lactamase_B, Metallo-beta-lactamase sup 2e-22
TIGR03413248 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrol 2e-20
COG0426 388 COG0426, FpaA, Uncharacterized flavoproteins [Ener 3e-13
COG1237259 COG1237, COG1237, Metal-dependent hydrolases of th 4e-08
PRK10241251 PRK10241, PRK10241, hydroxyacylglutathione hydrola 5e-08
PLN02398329 PLN02398, PLN02398, hydroxyacylglutathione hydrola 1e-07
COG2333293 COG2333, ComEC, Predicted hydrolase (metallo-beta- 2e-07
pfam12706197 pfam12706, Lactamase_B_2, Beta-lactamase superfami 5e-06
PRK11921 394 PRK11921, PRK11921, metallo-beta-lactamase/flavodo 3e-05
PRK11244250 PRK11244, phnP, carbon-phosphorus lyase complex ac 1e-04
TIGR00361662 TIGR00361, ComEC_Rec2, DNA internalization-related 2e-04
COG0595 555 COG0595, COG0595, mRNA degradation ribonucleases J 5e-04
COG1235269 COG1235, PhnP, Metal-dependent hydrolases of the b 0.002
TIGR03307238 TIGR03307, PhnP, phosphonate metabolism protein Ph 0.004
PRK11539755 PRK11539, PRK11539, ComEC family competence protei 0.004
>gnl|CDD|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily Back     alignment and domain information 
 Score =  127 bits (320), Expect = 4e-37
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 13/180 (7%)

Query: 32  NTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFE 91
           N+Y++      +L+DTG  +  + +  LK++  K+   ++ I+L+H H DH+GGL ++ E
Sbjct: 1   NSYLVRDDGGAILIDTGPGEAEDLLAELKKLGPKK---IDAIILTHGHPDHIGGLPELLE 57

Query: 92  HINPD----SATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGH 147
                      T    K       +           +TL DG  L + G  L VIHTPGH
Sbjct: 58  APGAPVYAPEGTAELLKDLLALLGELGAEAEPAPPDRTLKDGDELDLGGGELEVIHTPGH 117

Query: 148 TTDHIVLKLEEENVVFSGDTILGEGT------TVFSDLISYIESLRRIRSLKPDIIYPAH 201
           T   IVL L E  ++F+GD +   G          +     +ESL ++  L P ++ P H
Sbjct: 118 TPGSIVLYLPEGKILFTGDLLFAGGDGRTLVDGGDAAASDALESLLKLLKLLPKLVVPGH 177

Apart from the beta-lactamases a number of other proteins contain this domain. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor. Length = 177
>gnl|CDD|223565 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily Back     alignment and domain information
>gnl|CDD|234201 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase Back     alignment and domain information
>gnl|CDD|223503 COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|224158 COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] Back     alignment and domain information
>gnl|CDD|182327 PRK10241, PRK10241, hydroxyacylglutathione hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|215223 PLN02398, PLN02398, hydroxyacylglutathione hydrolase Back     alignment and domain information
>gnl|CDD|225212 COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>gnl|CDD|221727 pfam12706, Lactamase_B_2, Beta-lactamase superfamily domain Back     alignment and domain information
>gnl|CDD|237023 PRK11921, PRK11921, metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional Back     alignment and domain information
>gnl|CDD|183052 PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional Back     alignment and domain information
>gnl|CDD|232940 TIGR00361, ComEC_Rec2, DNA internalization-related competence protein ComEC/Rec2 Back     alignment and domain information
>gnl|CDD|223668 COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] Back     alignment and domain information
>gnl|CDD|224156 COG1235, PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] Back     alignment and domain information
>gnl|CDD|163212 TIGR03307, PhnP, phosphonate metabolism protein PhnP Back     alignment and domain information
>gnl|CDD|236924 PRK11539, PRK11539, ComEC family competence protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 216
TIGR03413248 GSH_gloB hydroxyacylglutathione hydrolase. Members 99.97
PLN02398329 hydroxyacylglutathione hydrolase 99.97
PLN02469258 hydroxyacylglutathione hydrolase 99.96
PLN02962251 hydroxyacylglutathione hydrolase 99.96
PRK10241251 hydroxyacylglutathione hydrolase; Provisional 99.96
PRK11921 394 metallo-beta-lactamase/flavodoxin domain-containin 99.95
KOG0813|consensus265 99.94
PRK05452 479 anaerobic nitric oxide reductase flavorubredoxin; 99.93
COG0491252 GloB Zn-dependent hydrolases, including glyoxylase 99.92
smart00849183 Lactamase_B Metallo-beta-lactamase superfamily. Ap 99.92
COG0426 388 FpaA Uncharacterized flavoproteins [Energy product 99.91
PF00753194 Lactamase_B: Metallo-beta-lactamase superfamily; I 99.89
PF14597199 Lactamase_B_5: Metallo-beta-lactamase superfamily; 99.83
KOG0814|consensus237 99.76
TIGR00649 422 MG423 conserved hypothetical protein. Contains an 99.75
PRK11539755 ComEC family competence protein; Provisional 99.7
TIGR00361662 ComEC_Rec2 DNA internalization-related competence 99.68
COG2015 655 Alkyl sulfatase and related hydrolases [Secondary 99.67
COG2333293 ComEC Predicted hydrolase (metallo-beta-lactamase 99.62
COG1237259 Metal-dependent hydrolases of the beta-lactamase s 99.62
PRK00685228 metal-dependent hydrolase; Provisional 99.6
PRK11244250 phnP carbon-phosphorus lyase complex accessory pro 99.58
PRK02113252 putative hydrolase; Provisional 99.58
TIGR03307238 PhnP phosphonate metabolism protein PhnP. This fam 99.56
TIGR02651299 RNase_Z ribonuclease Z. Processing of the 3-prime 99.53
TIGR02649303 true_RNase_BN ribonuclease BN. Members of this pro 99.52
TIGR03675 630 arCOG00543 arCOG00543 universal archaeal KH-domain 99.51
COG0595 555 mRNA degradation ribonucleases J1/J2 (metallo-beta 99.49
PRK05184302 pyrroloquinoline quinone biosynthesis protein PqqB 99.44
PRK04286298 hypothetical protein; Provisional 99.42
TIGR02108302 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B. 99.41
COG1236 427 YSH1 Predicted exonuclease of the beta-lactamase f 99.39
PRK02126 334 ribonuclease Z; Provisional 99.33
PF12706194 Lactamase_B_2: Beta-lactamase superfamily domain; 99.31
PF13483163 Lactamase_B_3: Beta-lactamase superfamily domain; 99.28
COG1782 637 Predicted metal-dependent RNase, consists of a met 99.25
PRK00055270 ribonuclease Z; Reviewed 99.25
KOG4736|consensus302 99.22
PRK11709355 putative L-ascorbate 6-phosphate lactonase; Provis 99.18
COG2248304 Predicted hydrolase (metallo-beta-lactamase superf 99.15
COG2220258 Predicted Zn-dependent hydrolases of the beta-lact 98.98
KOG1136|consensus 501 98.91
KOG1137|consensus 668 98.86
KOG1135|consensus 764 98.8
COG1234292 ElaC Metal-dependent hydrolases of the beta-lactam 98.68
COG1235269 PhnP Metal-dependent hydrolases of the beta-lactam 98.63
TIGR02650277 RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me 98.22
KOG2121|consensus746 98.01
KOG1361|consensus 481 97.84
PF02112 335 PDEase_II: cAMP phosphodiesterases class-II; Inter 97.28
PF14234285 DUF4336: Domain of unknown function (DUF4336) 97.23
KOG3798|consensus343 96.51
PF1369163 Lactamase_B_4: tRNase Z endonuclease 96.19
COG5212356 PDE1 Low-affinity cAMP phosphodiesterase [Signal t 94.52
KOG3592|consensus 934 92.71
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase Back     alignment and domain information 
Probab=99.97  E-value=1.5e-29  Score=196.79  Aligned_cols=157  Identities=27%  Similarity=0.515  Sum_probs=130.3

Q ss_pred             ceEEEEecCC-ceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCccccCChHHHHhhcCCCcceEeccCCCCcc
Q psy1547          31 TNTYILGTGS-RRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKD  109 (216)
Q Consensus        31 ~n~~li~~~~-~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~DH~gg~~~~~~~~~~~~~~i~~~~~~~~~  109 (216)
                      .++|+|..++ +++|||+|..      ..+.+.+.+.+.++++|++||.|+||++|+..+.++++   +++|++....  
T Consensus        10 N~~yli~~~~~~~ilID~g~~------~~i~~~l~~~g~~l~~Il~TH~H~DHigG~~~l~~~~~---~~V~~~~~~~--   78 (248)
T TIGR03413        10 NYIWLLHDPDGQAAVVDPGEA------EPVLDALEARGLTLTAILLTHHHHDHVGGVAELLEAFP---APVYGPAEER--   78 (248)
T ss_pred             EEEEEEEcCCCCEEEEcCCCh------HHHHHHHHHcCCeeeEEEeCCCCccccCCHHHHHHHCC---CeEEeccccc--
Confidence            4578887765 7999999964      34556667667789999999999999999999998876   6788776431  


Q ss_pred             cccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCCcEEEEcceecCCCcccc--ccHHHHHHHHH
Q psy1547         110 EAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVF--SDLISYIESLR  187 (216)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~~vl~~GD~~~~~~~~~~--~~~~~~~~~l~  187 (216)
                             .  ......+.+++++.+|+.+++++++||||+|++++++++.+++|+||+++..+...+  .+..+|.++|+
T Consensus        79 -------~--~~~~~~v~~g~~~~~g~~~i~v~~tpGHT~g~i~~~~~~~~~lftGDtl~~~g~g~~~~~~~~~~~~Sl~  149 (248)
T TIGR03413        79 -------I--PGITHPVKDGDTVTLGGLEFEVLAVPGHTLGHIAYYLPDSPALFCGDTLFSAGCGRLFEGTPEQMYDSLQ  149 (248)
T ss_pred             -------C--CCCcEEeCCCCEEEECCEEEEEEECCCCCcccEEEEECCCCEEEEcCccccCCcCCCCCCCHHHHHHHHH
Confidence                   1  123467889999999999999999999999999999998999999999987654333  78999999999


Q ss_pred             HHHcCCCC-eEEcCCCccccC
Q psy1547         188 RIRSLKPD-IIYPAHGPVVEV  207 (216)
Q Consensus       188 ~l~~~~~~-~v~pgHg~~~~~  207 (216)
                      ++.+++.+ .++||||+..+.
T Consensus       150 ~l~~l~~~~~i~pGH~~~~~n  170 (248)
T TIGR03413       150 RLAALPDDTLVYCAHEYTLSN  170 (248)
T ss_pred             HHHcCCCCeEEECCCCchHHH
Confidence            99999998 589999987653

Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
>PLN02398 hydroxyacylglutathione hydrolase Back     alignment and domain information
>PLN02469 hydroxyacylglutathione hydrolase Back     alignment and domain information
>PLN02962 hydroxyacylglutathione hydrolase Back     alignment and domain information
>PRK10241 hydroxyacylglutathione hydrolase; Provisional Back     alignment and domain information
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional Back     alignment and domain information
>KOG0813|consensus Back     alignment and domain information
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional Back     alignment and domain information
>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] Back     alignment and domain information
>smart00849 Lactamase_B Metallo-beta-lactamase superfamily Back     alignment and domain information
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain [] Back     alignment and domain information
>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B Back     alignment and domain information
>KOG0814|consensus Back     alignment and domain information
>TIGR00649 MG423 conserved hypothetical protein Back     alignment and domain information
>PRK11539 ComEC family competence protein; Provisional Back     alignment and domain information
>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2 Back     alignment and domain information
>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] Back     alignment and domain information
>PRK00685 metal-dependent hydrolase; Provisional Back     alignment and domain information
>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional Back     alignment and domain information
>PRK02113 putative hydrolase; Provisional Back     alignment and domain information
>TIGR03307 PhnP phosphonate metabolism protein PhnP Back     alignment and domain information
>TIGR02651 RNase_Z ribonuclease Z Back     alignment and domain information
>TIGR02649 true_RNase_BN ribonuclease BN Back     alignment and domain information
>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein Back     alignment and domain information
>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] Back     alignment and domain information
>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional Back     alignment and domain information
>PRK04286 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B Back     alignment and domain information
>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK02126 ribonuclease Z; Provisional Back     alignment and domain information
>PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A Back     alignment and domain information
>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A Back     alignment and domain information
>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] Back     alignment and domain information
>PRK00055 ribonuclease Z; Reviewed Back     alignment and domain information
>KOG4736|consensus Back     alignment and domain information
>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional Back     alignment and domain information
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] Back     alignment and domain information
>KOG1136|consensus Back     alignment and domain information
>KOG1137|consensus Back     alignment and domain information
>KOG1135|consensus Back     alignment and domain information
>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] Back     alignment and domain information
>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] Back     alignment and domain information
>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type Back     alignment and domain information
>KOG2121|consensus Back     alignment and domain information
>KOG1361|consensus Back     alignment and domain information
>PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3 Back     alignment and domain information
>PF14234 DUF4336: Domain of unknown function (DUF4336) Back     alignment and domain information
>KOG3798|consensus Back     alignment and domain information
>PF13691 Lactamase_B_4: tRNase Z endonuclease Back     alignment and domain information
>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] Back     alignment and domain information
>KOG3592|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
4ad9_A289 Crystal Structure Of Human Lactb2. Length = 289 1e-59
2xf4_A210 Crystal Structure Of Salmonella Enterica Serovar Ty 8e-13
2zwr_A207 Crystal Structure Of Ttha1623 From Thermus Thermoph 3e-10
2zo4_A317 Crystal Structure Of Metallo-Beta-Lactamase Family 6e-09
1a7t_A232 Metallo-Beta-Lactamase With Mes Length = 232 7e-06
1xm8_A254 X-Ray Structure Of Glyoxalase Ii From Arabidopsis T 8e-06
4znb_A232 Metallo-Beta-Lactamase (C181s Mutant) Length = 232 1e-05
3r2u_A 466 2.1 Angstrom Resolution Crystal Structure Of Metall 1e-05
1znb_A232 Metallo-Beta-Lactamase Length = 232 1e-05
2q0j_A321 Structure Of Pseudomonas Quinolone Signal Response 1e-05
2vw8_A303 Crystal Structure Of Quinolone Signal Response Prot 2e-05
2q0i_A303 Structure Of Pseudomonas Quinolone Signal Response 2e-05
3dh8_A303 Structure Of Pseudomonas Quinolone Signal Response 2e-05
2nxa_A221 Structure Of Zn-Dependent Metallo-Beta-Lactamase Fr 2e-05
2bmi_A232 Metallo-Beta-Lactamase Length = 232 2e-05
3adr_A261 The First Crystal Structure Of An Archaeal Metallo- 2e-05
1hlk_A227 Metallo-Beta-Lactamase From Bacteroides Fragilis In 2e-05
2nzf_A221 Structure Of Beta-Lactamase Ii From Bacillus Cereus 8e-05
2nze_A222 Structure Of Beta-lactamase Ii From Bacillus Cereus 9e-05
3knr_A227 Bacillus Cereus Metallo-Beta-Lactamase Cys221asp Mu 1e-04
1x8g_A227 Crystal Structure Of The Mono-Zinc Carbapenemase Cp 5e-04
3vpe_A262 Crystal Structure Of Metallo-beta-lactamase Smb-1 L 5e-04
3i0v_A212 Bacillus Cereus Metallo-beta-lactamase: Apo Form Le 6e-04
1dxk_A227 Metallo-Beta-Lactamase From Bacillus Cereus 569H9 C 6e-04
3i14_A216 Cobalt-Substituted Metallo-Beta-Lactamase From Baci 7e-04
1x8h_A228 The Mono-Zinc Carbapenemase Cpha (N220g Mutant) Sho 8e-04
1x8i_A227 Crystal Structure Of The Zinc Carbapenemase Cpha In 8e-04
2bc2_A227 Metallo Beta-Lactamase Ii From Bacillus Cereus 569H 8e-04
1bmc_A221 Structure Of A Zinc Metallo-Beta-Lactamase From Bac 9e-04
>pdb|4AD9|A Chain A, Crystal Structure Of Human Lactb2. Length = 289 Back     alignment and structure 
Iteration: 1

 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 110/205 (53%), Positives = 144/205 (70%), Gaps = 2/205 (0%)
Query: 1   MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLK 60
           M+A +  V +LS+RV+RVLG NPGPMTLQGTNTY++GTG RR+L+DTGEP   EYI  LK
Sbjct: 2   MAAVLQRVERLSNRVVRVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLK 61
Query: 61  QVLNKESISLEHIVLSHWHNDHVGGLKDIFEHINPDSATIWKFKGTEKDEAQATDFVPEN 120
           Q L + + +++ IV++HWH DH GG+ DI + IN D  T +  K   ++  +        
Sbjct: 62  QALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINND--TTYCIKKLPRNPQREEIIGNGE 119
Query: 121 KTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSDLI 180
           +    L DG ++K EGATLRV++TPGHT DH+ L LEEEN +FSGD ILGEGTTVF DL 
Sbjct: 120 QQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLY 179
Query: 181 SYIESLRRIRSLKPDIIYPAHGPVV 205
            Y+ SL+ +  +K DIIYP HGPV+
Sbjct: 180 DYMNSLKELLKIKADIIYPGHGPVI 204
>pdb|2XF4|A Chain A, Crystal Structure Of Salmonella Enterica Serovar Typhimurium Ycbl Length = 210 Back     alignment and structure
>pdb|2ZWR|A Chain A, Crystal Structure Of Ttha1623 From Thermus Thermophilus Hb8 Length = 207 Back     alignment and structure
>pdb|2ZO4|A Chain A, Crystal Structure Of Metallo-Beta-Lactamase Family Protein Ttha1429 From Thermus Thermophilus Hb8 Length = 317 Back     alignment and structure
>pdb|1A7T|A Chain A, Metallo-Beta-Lactamase With Mes Length = 232 Back     alignment and structure
>pdb|1XM8|A Chain A, X-Ray Structure Of Glyoxalase Ii From Arabidopsis Thaliana Gene At2g31350 Length = 254 Back     alignment and structure
>pdb|4ZNB|A Chain A, Metallo-Beta-Lactamase (C181s Mutant) Length = 232 Back     alignment and structure
>pdb|3R2U|A Chain A, 2.1 Angstrom Resolution Crystal Structure Of Metallo-Beta-Lactamase From Staphylococcus Aureus Subsp. Aureus Col Length = 466 Back     alignment and structure
>pdb|1ZNB|A Chain A, Metallo-Beta-Lactamase Length = 232 Back     alignment and structure
>pdb|2Q0J|A Chain A, Structure Of Pseudomonas Quinolone Signal Response Protein Pqse Length = 321 Back     alignment and structure
>pdb|2VW8|A Chain A, Crystal Structure Of Quinolone Signal Response Protein Pqse From Pseudomonas Aeruginosa Length = 303 Back     alignment and structure
>pdb|2Q0I|A Chain A, Structure Of Pseudomonas Quinolone Signal Response Protein Pqse Length = 303 Back     alignment and structure
>pdb|3DH8|A Chain A, Structure Of Pseudomonas Quinolone Signal Response Protein Pqse Length = 303 Back     alignment and structure
>pdb|2NXA|A Chain A, Structure Of Zn-Dependent Metallo-Beta-Lactamase From Bacillus Cereus R121h, C221d Double Mutant Length = 221 Back     alignment and structure
>pdb|2BMI|A Chain A, Metallo-Beta-Lactamase Length = 232 Back     alignment and structure
>pdb|3ADR|A Chain A, The First Crystal Structure Of An Archaeal Metallo-Beta-Lactamase Superfamily Protein; St1585 From Sulfolobus Tokodaii Length = 261 Back     alignment and structure
>pdb|1HLK|A Chain A, Metallo-Beta-Lactamase From Bacteroides Fragilis In Complex With A Tricyclic Inhibitor Length = 227 Back     alignment and structure
>pdb|2NZF|A Chain A, Structure Of Beta-Lactamase Ii From Bacillus Cereus. R121h, C221s Double Mutant. Space Group C2 Length = 221 Back     alignment and structure
>pdb|2NZE|A Chain A, Structure Of Beta-lactamase Ii From Bacillus Cereus. R121h, C221s Double Mutant. Space Group P3121. Length = 222 Back     alignment and structure
>pdb|3KNR|A Chain A, Bacillus Cereus Metallo-Beta-Lactamase Cys221asp Mutant, 1 Mm Zn(Ii) Length = 227 Back     alignment and structure
>pdb|1X8G|A Chain A, Crystal Structure Of The Mono-Zinc Carbapenemase Cpha From Aeromonas Hydrophyla Length = 227 Back     alignment and structure
>pdb|3VPE|A Chain A, Crystal Structure Of Metallo-beta-lactamase Smb-1 Length = 262 Back     alignment and structure
>pdb|1DXK|A Chain A, Metallo-Beta-Lactamase From Bacillus Cereus 569H9 C168S Mutant Length = 227 Back     alignment and structure
>pdb|1X8H|A Chain A, The Mono-Zinc Carbapenemase Cpha (N220g Mutant) Shows A Zn(Ii)- Nh2 Arg Coordination Length = 228 Back     alignment and structure
>pdb|1X8I|A Chain A, Crystal Structure Of The Zinc Carbapenemase Cpha In Complex With The Antibiotic Biapenem Length = 227 Back     alignment and structure
>pdb|2BC2|A Chain A, Metallo Beta-Lactamase Ii From Bacillus Cereus 569H9 AT Ph 6.0, Trigonal Crystal Form Length = 227 Back     alignment and structure
>pdb|1BMC|A Chain A, Structure Of A Zinc Metallo-Beta-Lactamase From Bacillus Cereus Length = 221 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
4ad9_A289 Lactb2, beta-lactamase-like protein 2; hydrolase, 9e-77
3adr_A261 Putative uncharacterized protein ST1585; quorum se 9e-48
2zo4_A317 Metallo-beta-lactamase family protein; hydrolase; 1e-43
1a7t_A232 Metallo-beta-lactamase; hydrolase (beta-lactamase) 8e-41
3m8t_A294 'BLR6230 protein; subclass B3 beta-lactamase, zinc 5e-35
1sml_A269 Protein (penicillinase); metallo-beta-lactamase, a 2e-34
2vw8_A303 PA1000, PQSE; quinolone signal response protein, s 4e-33
1k07_A263 FEZ-1 beta-lactamase; monomer with alpha-beta/BETA 5e-32
2zwr_A207 Metallo-beta-lactamase superfamily protein; hydrol 7e-32
1jjt_A228 IMP-1 metallo beta-lactamase; metallo-beta-lactama 3e-31
4ax1_B303 Metallo-beta-lactamase AIM-1; hydrolase, antibioti 5e-31
2y8b_A265 Metallo-B-lactamase; hydrolase, cephalosporins, an 2e-30
2xf4_A210 Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A 4e-30
1m2x_A223 Class B carbapenemase BLAB-1; alpha-beta/BETA-alph 1e-27
4eyb_A270 Beta-lactamase NDM-1; metallo beta lactamase, anti 6e-27
1xm8_A254 Glyoxalase II; structural genomics, protein struct 1e-25
3l6n_A219 Metallo-beta-lactamase; zinc, hydolase, antibiotic 7e-25
2ohh_A 404 Type A flavoprotein FPRA; beta-lactamase like doma 9e-25
1mqo_A227 Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd 1e-24
2p97_A201 Hypothetical protein; putative metal-dependent hyd 8e-24
2qed_A258 Hydroxyacylglutathione hydrolase; metallo-B- super 2e-23
1ztc_A221 Hypothetical protein TM0894; structural genomics, 2e-23
2fhx_A246 SPM-1; metallo-beta-lactamase, dinuclear zinc, ant 6e-23
3iog_A227 Beta-lactamase; hydrolase, antibiotic resistance, 7e-22
1qh5_A260 Glyoxalase II, protein (hydroxyacylglutathione hyd 3e-20
3q6v_A233 Beta-lactamase; metalloenzyme, alpha-beta, hydrola 4e-19
2q9u_A 414 A-type flavoprotein; flavodoxin like, beta lactama 2e-18
3tp9_A 474 Beta-lactamase and rhodanese domain protein; struc 3e-18
3r2u_A 466 Metallo-beta-lactamase family protein; structural 5e-18
2p18_A311 Glyoxalase II; metalloprotein, beta sandwich, alph 1e-17
3hnn_A262 Putative diflavin flavoprotein A 5; PSI-2, protein 7e-17
2gcu_A245 Putative hydroxyacylglutathione hydrolase 3; ethyl 4e-16
1vme_A 410 Flavoprotein; TM0755, structural genomics, JCSG, p 6e-15
1e5d_A 402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 9e-15
1ycg_A 398 Nitric oxide reductase; DIIRON site, oxidoreductas 1e-14
3dha_A254 N-acyl homoserine lactone hydrolase; zinc bimetall 1e-14
3aj3_A274 MLR6805 protein, 4-pyridoxolactonase; Zn-protein, 2e-14
1p9e_A331 Methyl parathion hydrolase; Zn containing; 2.40A { 3e-14
3esh_A280 Protein similar to metal-dependent hydrolase; stru 9e-13
4efz_A298 Metallo-beta-lactamase family protein; structural 9e-13
2r2d_A276 AGR_PTI_140P, Zn-dependent hydrolases; lactonase, 4e-12
2p4z_A284 Metal-dependent hydrolases of the beta-lactamase s 1e-09
2i7t_A 459 Cleavage and polyadenylation specificity factor 73 5e-08
2yhe_A 668 SEC-alkyl sulfatase; hydrolase, inversion, metallo 1e-06
1zkp_A268 Hypothetical protein BA1088; zinc binding protein, 6e-06
2ycb_A 636 Beta-CAsp RNAse, cleavage and polyadenylation spec 1e-05
2cfu_A 658 SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 1e-05
2xr1_A 640 Cleavage and polyadenylation specificity factor 1 3e-05
3af5_A 651 Putative uncharacterized protein PH1404; archaeal 3e-05
3g1p_A258 Protein PHNP; C-P lyase, phosphodiesterase, phosph 7e-05
3h3e_A267 Uncharacterized protein TM1679; structural genomic 1e-04
3iek_A 431 Ribonuclease TTHA0252; metallo beta lactamase fold 2e-04
2i7x_A 717 Protein CFT2; polyadenylation, metallo-B-lactamase 5e-04
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Length = 289 Back     alignment and structure
 Score =  231 bits (591), Expect = 9e-77
 Identities = 110/208 (52%), Positives = 144/208 (69%), Gaps = 6/208 (2%)

Query: 1   MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLK 60
           M+A +  V +LS+RV+RVLG NPGPMTLQGTNTY++GTG RR+L+DTGEP   EYI  LK
Sbjct: 2   MAAVLQRVERLSNRVVRVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLK 61

Query: 61  QVLNKESISLEHIVLSHWHNDHVGGLKDIFEHIN-PDSATIWKF-KGTEKDEAQATDFVP 118
           Q L + + +++ IV++HWH DH GG+ DI + IN   +  I K  +  +++E        
Sbjct: 62  QALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIGNGEQQ 121

Query: 119 ENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEENVVFSGDTILGEGTTVFSD 178
                  L DG ++K EGATLRV++TPGHT DH+ L LEEEN +FSGD ILGEGTTVF D
Sbjct: 122 Y----VYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTVFED 177

Query: 179 LISYIESLRRIRSLKPDIIYPAHGPVVE 206
           L  Y+ SL+ +  +K DIIYP HGPV+ 
Sbjct: 178 LYDYMNSLKELLKIKADIIYPGHGPVIH 205
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Length = 261 Back     alignment and structure
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Length = 317 Back     alignment and structure
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Length = 232 Back     alignment and structure
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Length = 294 Back     alignment and structure
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269 Back     alignment and structure
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Length = 303 Back     alignment and structure
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Length = 263 Back     alignment and structure
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Length = 207 Back     alignment and structure
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Length = 228 Back     alignment and structure
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Length = 303 Back     alignment and structure
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Length = 265 Back     alignment and structure
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Length = 210 Back     alignment and structure
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Length = 223 Back     alignment and structure
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Length = 270 Back     alignment and structure
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Length = 254 Back     alignment and structure
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} Length = 219 Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Length = 404 Back     alignment and structure
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Length = 227 Back     alignment and structure
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Length = 201 Back     alignment and structure
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Length = 258 Back     alignment and structure
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Length = 221 Back     alignment and structure
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Length = 246 Back     alignment and structure
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A Length = 227 Back     alignment and structure
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Length = 260 Back     alignment and structure
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A Length = 233 Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Length = 414 Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474 Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466 Back     alignment and structure
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Length = 311 Back     alignment and structure
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Length = 245 Back     alignment and structure
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein STR initiative, PSI, joint center for structural genomics, ELEC transport; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3 Length = 410 Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Length = 402 Back     alignment and structure
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Length = 398 Back     alignment and structure
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Length = 254 Back     alignment and structure
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Length = 274 Back     alignment and structure
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Length = 331 Back     alignment and structure
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Length = 280 Back     alignment and structure
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Length = 298 Back     alignment and structure
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Length = 276 Back     alignment and structure
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Length = 284 Back     alignment and structure
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A Length = 459 Back     alignment and structure
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} Length = 668 Back     alignment and structure
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Length = 268 Back     alignment and structure
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 636 Back     alignment and structure
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* Length = 658 Back     alignment and structure
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Length = 640 Back     alignment and structure
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Length = 651 Back     alignment and structure
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Length = 258 Back     alignment and structure
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} Length = 267 Back     alignment and structure
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* Length = 431 Back     alignment and structure
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 Length = 717 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query216
4ad9_A289 Lactb2, beta-lactamase-like protein 2; hydrolase, 100.0
2zo4_A317 Metallo-beta-lactamase family protein; hydrolase; 100.0
3l6n_A219 Metallo-beta-lactamase; zinc, hydolase, antibiotic 100.0
1m2x_A223 Class B carbapenemase BLAB-1; alpha-beta/BETA-alph 100.0
4eyb_A270 Beta-lactamase NDM-1; metallo beta lactamase, anti 99.98
3q6v_A233 Beta-lactamase; metalloenzyme, alpha-beta, hydrola 99.98
4hl2_A243 Beta-lactamase NDM-1; structural genomics, PSI-bio 99.98
1mqo_A227 Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd 99.98
3iog_A227 Beta-lactamase; hydrolase, antibiotic resistance, 99.98
3hnn_A262 Putative diflavin flavoprotein A 5; PSI-2, protein 99.98
1a7t_A232 Metallo-beta-lactamase; hydrolase (beta-lactamase) 99.97
1k07_A263 FEZ-1 beta-lactamase; monomer with alpha-beta/BETA 99.97
3m8t_A294 'BLR6230 protein; subclass B3 beta-lactamase, zinc 99.97
1jjt_A228 IMP-1 metallo beta-lactamase; metallo-beta-lactama 99.97
2vw8_A303 PA1000, PQSE; quinolone signal response protein, s 99.97
2fhx_A246 SPM-1; metallo-beta-lactamase, dinuclear zinc, ant 99.97
2y8b_A265 Metallo-B-lactamase; hydrolase, cephalosporins, an 99.97
1xm8_A254 Glyoxalase II; structural genomics, protein struct 99.97
2xf4_A210 Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A 99.97
1sml_A269 Protein (penicillinase); metallo-beta-lactamase, a 99.97
2zwr_A207 Metallo-beta-lactamase superfamily protein; hydrol 99.97
4ax1_B303 Metallo-beta-lactamase AIM-1; hydrolase, antibioti 99.97
4efz_A298 Metallo-beta-lactamase family protein; structural 99.96
2qed_A258 Hydroxyacylglutathione hydrolase; metallo-B- super 99.96
2gcu_A245 Putative hydroxyacylglutathione hydrolase 3; ethyl 99.96
1qh5_A260 Glyoxalase II, protein (hydroxyacylglutathione hyd 99.96
2p97_A201 Hypothetical protein; putative metal-dependent hyd 99.96
2cfu_A 658 SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 99.96
2ohh_A 404 Type A flavoprotein FPRA; beta-lactamase like doma 99.96
2p18_A311 Glyoxalase II; metalloprotein, beta sandwich, alph 99.96
3tp9_A 474 Beta-lactamase and rhodanese domain protein; struc 99.96
1e5d_A 402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 99.96
2q9u_A 414 A-type flavoprotein; flavodoxin like, beta lactama 99.96
4dik_A 410 Flavoprotein; TM0755, electron transport, DI-iron 99.96
3r2u_A 466 Metallo-beta-lactamase family protein; structural 99.96
1ycg_A 398 Nitric oxide reductase; DIIRON site, oxidoreductas 99.95
3adr_A261 Putative uncharacterized protein ST1585; quorum se 99.95
2yhe_A 668 SEC-alkyl sulfatase; hydrolase, inversion, metallo 99.91
1ztc_A221 Hypothetical protein TM0894; structural genomics, 99.93
3dha_A254 N-acyl homoserine lactone hydrolase; zinc bimetall 99.93
3aj3_A274 MLR6805 protein, 4-pyridoxolactonase; Zn-protein, 99.92
2r2d_A276 AGR_PTI_140P, Zn-dependent hydrolases; lactonase, 99.91
1p9e_A331 Methyl parathion hydrolase; Zn containing; 2.40A { 99.91
3esh_A280 Protein similar to metal-dependent hydrolase; stru 99.91
1zkp_A268 Hypothetical protein BA1088; zinc binding protein, 99.83
3zq4_A 555 Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat 99.78
3g1p_A258 Protein PHNP; C-P lyase, phosphodiesterase, phosph 99.73
3bk2_A 562 RNAse J, metal dependent hydrolase; endoribonuclea 99.73
3iek_A 431 Ribonuclease TTHA0252; metallo beta lactamase fold 99.73
2ycb_A 636 Beta-CAsp RNAse, cleavage and polyadenylation spec 99.7
2az4_A 429 Hypothetical protein EF2904; structural genomics, 99.69
3kl7_A235 Putative metal-dependent hydrolase; structural gen 99.69
2xr1_A 640 Cleavage and polyadenylation specificity factor 1 99.68
3md7_A293 Beta-lactamase-like; ssgcid, hydrolase, structural 99.68
2i7x_A 717 Protein CFT2; polyadenylation, metallo-B-lactamase 99.68
2i7t_A 459 Cleavage and polyadenylation specificity factor 73 99.66
2bib_A 547 CBPE, teichoic acid phosphorylcholine esterase/ ch 99.65
2cbn_A306 Ribonuclease Z; phosphodiesterase beta lactamase t 99.63
1y44_A 320 Ribonuclease Z; zinc-dependent metal hydrolase, hy 99.62
2e7y_A280 TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, 99.61
3af5_A 651 Putative uncharacterized protein PH1404; archaeal 99.6
2wyl_A360 L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 99.55
2p4z_A284 Metal-dependent hydrolases of the beta-lactamase s 99.55
3zwf_A 368 Zinc phosphodiesterase ELAC protein 1; beta-lactam 99.54
3jxp_A321 Coenzyme PQQ synthesis protein B; alpha-beta prote 99.51
3bv6_A379 Metal-dependent hydrolase; metallo protein, beta-l 99.5
3rpc_A264 Possible metal-dependent hydrolase; structural gen 99.47
1vjn_A220 Zn-dependent hydrolase of metallo-beta-lactamase s 99.41
4b87_A 367 DNA cross-LINK repair 1A protein; dclre1A, DCLRE, 99.36
3h3e_A267 Uncharacterized protein TM1679; structural genomic 99.36
3zdk_A 336 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A 99.18
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=7.4e-39  Score=254.06  Aligned_cols=204  Identities=54%  Similarity=0.899  Sum_probs=175.9

Q ss_pred             CCCCCCCccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhCCCCccEEEecccCc
Q psy1547           1 MSAKIPNVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHN   80 (216)
Q Consensus         1 m~~~~~~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~~~~i~~v~~TH~H~   80 (216)
                      |+++++.+.+|+++||+|.+.+|.++..+++|||+|+++++++|||||.....+..+.+.+.+...+.+|++|++||.|+
T Consensus         2 m~~~~~~~~~v~~~v~~v~g~~p~p~~~~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~   81 (289)
T 4ad9_A            2 MAAVLQRVERLSNRVVRVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHR   81 (289)
T ss_dssp             CCCCCCSEEECSSSEEEEECSCCBTTTBTCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSH
T ss_pred             CcccCcchhccCCCeEEEeCCCCCCCcCCceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCC
Confidence            77789999999999999999999999999999999999999999999976555566777888887788999999999999


Q ss_pred             cccCChHHHHhhcCCC-cceEeccCCCCcccccccCCCCCCCceeecCCCCeEEECCeeEEEEeCCCCCCCceEEEECCC
Q psy1547          81 DHVGGLKDIFEHINPD-SATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIHTPGHTTDHIVLKLEEE  159 (216)
Q Consensus        81 DH~gg~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~pgHt~~~~~~~~~~~  159 (216)
                      ||+||+..+.++++.. .++++.++..........   ........+++|+++.+|+.+++++++|||++|++++++++.
T Consensus        82 DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~~~~~~~~  158 (289)
T 4ad9_A           82 DHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIG---NGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLEEE  158 (289)
T ss_dssp             HHHTTHHHHHHHSCCSSCCCEEECCCSSCCCCCBT---TTTBCEEECCTTCEEEETTEEEEEEECCSSSTTCEEEEETTT
T ss_pred             cccccHHHHHHhhccCCCceEEecCCCcchhhhcc---CCCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEcCC
Confidence            9999999999987432 267777654432211111   123457889999999999999999999999999999999999


Q ss_pred             cEEEEcceecCCCccccccHHHHHHHHHHHHcCCCCeEEcCCCccccC
Q psy1547         160 NVVFSGDTILGEGTTVFSDLISYIESLRRIRSLKPDIIYPAHGPVVEV  207 (216)
Q Consensus       160 ~vl~~GD~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~v~pgHg~~~~~  207 (216)
                      ++||+||+++......+.+..+|+++++++.++++++++||||+++.+
T Consensus       159 ~~lftGD~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~  206 (289)
T 4ad9_A          159 NAIFSGDCILGEGTTVFEDLYDYMNSLKELLKIKADIIYPGHGPVIHN  206 (289)
T ss_dssp             TEEEEETSSCSSSCCCCSCHHHHHHHHHHHHHHTCSEEEESSSSCBSC
T ss_pred             CEEEEecccCCCCCcCcCCHHHHHHHHHHHHcCCCCEEEeCCCChhcC
Confidence            999999998888777888999999999999999999999999999876
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Back     alignment and structure
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0 Back     alignment and structure
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Back     alignment and structure
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Back     alignment and structure
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A Back     alignment and structure
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Back     alignment and structure
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Back     alignment and structure
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A Back     alignment and structure
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Back     alignment and structure
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Back     alignment and structure
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Back     alignment and structure
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Back     alignment and structure
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Back     alignment and structure
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Back     alignment and structure
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Back     alignment and structure
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Back     alignment and structure
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Back     alignment and structure
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Back     alignment and structure
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Back     alignment and structure
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Back     alignment and structure
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Back     alignment and structure
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Back     alignment and structure
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Back     alignment and structure
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Back     alignment and structure
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Back     alignment and structure
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Back     alignment and structure
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Back     alignment and structure
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Back     alignment and structure
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Back     alignment and structure
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} Back     alignment and structure
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Back     alignment and structure
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Back     alignment and structure
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Back     alignment and structure
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Back     alignment and structure
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Back     alignment and structure
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Back     alignment and structure
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Back     alignment and structure
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} Back     alignment and structure
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Back     alignment and structure
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* Back     alignment and structure
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* Back     alignment and structure
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 Back     alignment and structure
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Back     alignment and structure
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* Back     alignment and structure
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 Back     alignment and structure
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A Back     alignment and structure
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* Back     alignment and structure
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Back     alignment and structure
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Back     alignment and structure
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Back     alignment and structure
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Back     alignment and structure
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A* Back     alignment and structure
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Back     alignment and structure
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} Back     alignment and structure
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A Back     alignment and structure
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor} Back     alignment and structure
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula} Back     alignment and structure
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4 Back     alignment and structure
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens} Back     alignment and structure
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} Back     alignment and structure
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 216
d2aioa1266 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xa 5e-23
d1ko3a_230 d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo 2e-22
d1k07a_262 d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoriba 8e-22
d1vmea2250 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, 2e-21
d2gmna1264 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Br 2e-21
d1e5da2249 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreducta 4e-21
d1ycga2249 d.157.1.3 (A:2-250) Nitric oxide reductase N-termi 2e-19
d1x8ha_228 d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromona 5e-19
d2q0ia1298 d.157.1.14 (A:1-298) Quinolone signal response pro 4e-18
d1znba_230 d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroi 1e-17
d1jjta_220 d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo 3e-17
d1mqoa_221 d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus 3e-17
d2p97a1200 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 4e-17
d1ztca1207 d.157.1.11 (A:1-207) Hypothetical protein TM0894 { 2e-16
d1xm8a_254 d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio 3e-16
d1m2xa_219 d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseob 2e-14
d2cfua2 505 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudo 5e-12
d1p9ea_294 d.157.1.5 (A:) Methyl parathion hydrolase {Pseudom 7e-12
d2qeda1251 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglut 5e-10
d2dkfa1 431 d.157.1.10 (A:1-431) Putative RNA-degradation prot 5e-08
d2i7ta1 451 d.157.1.10 (A:9-459) Cleavage and polyadenylation 7e-08
d2i7xa1 514 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two 2e-07
d1qh5a_260 d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio 7e-07
d2e7ya1280 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Ther 1e-05
d1zkpa1244 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (B 4e-05
d2az4a1183 d.157.1.10 (A:56-238) Hypothetical protein EF2904 1e-04
d1wraa1305 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholi 6e-04
d1xtoa_304 d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, P 0.001
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Length = 266 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Xanthomonas maltophilia [TaxId: 40324]

 Score = 91.2 bits (225), Expect = 5e-23
 Identities = 33/199 (16%), Positives = 61/199 (30%), Gaps = 17/199 (8%)

Query: 30  GTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKESISLEHIVLSHWHNDHVGGLKDI 89
                ++ T    +LLD G P    ++ +  +        L  I+LSH H DH G + ++
Sbjct: 36  DLTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAEL 95

Query: 90  FE------HINPDSATIWKFKGTEKDEAQATDFVPENKTVQTLTDGQLLKVEGATLRVIH 143
                     N +SA +    G++          P     + + DG+++ V G       
Sbjct: 96  KRRTGAKVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHF 155

Query: 144 TPGHTTDHIVLKLEEENVVFSGDTILGEG-----------TTVFSDLISYIESLRRIRSL 192
             GHT         +            +                  +  Y  S   +R+L
Sbjct: 156 MAGHTPGSTAWTWTDTRNGKPVRIAYADSLSAPGYQLQGNPRYPHLIEDYRRSFATVRAL 215

Query: 193 KPDIIYPAHGPVVEVGLSF 211
             D++   H        + 
Sbjct: 216 PCDVLLTPHPGASNWDYAA 234
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Length = 230 Back     information, alignment and structure
>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Length = 262 Back     information, alignment and structure
>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 250 Back     information, alignment and structure
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Length = 264 Back     information, alignment and structure
>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Length = 249 Back     information, alignment and structure
>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Length = 249 Back     information, alignment and structure
>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Length = 228 Back     information, alignment and structure
>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Length = 298 Back     information, alignment and structure
>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Length = 230 Back     information, alignment and structure
>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Length = 220 Back     information, alignment and structure
>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Length = 221 Back     information, alignment and structure
>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Length = 200 Back     information, alignment and structure
>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Length = 207 Back     information, alignment and structure
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 254 Back     information, alignment and structure
>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Length = 219 Back     information, alignment and structure
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Length = 505 Back     information, alignment and structure
>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Length = 294 Back     information, alignment and structure
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Length = 251 Back     information, alignment and structure
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Length = 431 Back     information, alignment and structure
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 451 Back     information, alignment and structure
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 514 Back     information, alignment and structure
>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Length = 260 Back     information, alignment and structure
>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Length = 280 Back     information, alignment and structure
>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Length = 244 Back     information, alignment and structure
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Length = 183 Back     information, alignment and structure
>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Length = 305 Back     information, alignment and structure
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Length = 304 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query216
d1x8ha_228 Zn metallo-beta-lactamase {Aeromonas hydrophila, C 100.0
d1mqoa_221 Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 100.0
d2gmna1264 Zn metallo-beta-lactamase {Bradyrhizobium japonicu 100.0
d1k07a_262 Zn metallo-beta-lactamase {Fluoribacter gormanii, 99.98
d1jjta_220 Zn metallo-beta-lactamase {Pseudomonas aeruginosa, 99.97
d1ko3a_230 Zn metallo-beta-lactamase {Pseudomonas aeruginosa, 99.97
d1e5da2249 Rubredoxin oxygen:oxidoreductase (ROO), N-terminal 99.97
d2aioa1266 Zn metallo-beta-lactamase {Xanthomonas maltophilia 99.97
d1xm8a_254 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.97
d1ycga2249 Nitric oxide reductase N-terminal domain {Moorella 99.97
d1m2xa_219 Zn metallo-beta-lactamase {Chryseobacterium mening 99.97
d2q0ia1298 Quinolone signal response protein PqsE {Pseudomona 99.97
d1znba_230 Zn metallo-beta-lactamase {Bacteroides fragilis [T 99.97
d2cfua2 505 Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI 99.97
d2qeda1251 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.96
d1qh5a_260 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.95
d2p97a1200 Hypothetical protein Ava3068 {Anabaena variabilis 99.94
d1vmea2250 ROO-like flavoprotein TM0755, N-terminal domain {T 99.94
d1ztca1207 Hypothetical protein TM0894 {Thermotoga maritima [ 99.92
d1p9ea_294 Methyl parathion hydrolase {Pseudomonas sp. WBC-3 99.9
d1zkpa1244 Hypothetical protein BA1088 (BAS1016) {Bacillus an 99.72
d2dkfa1 431 Putative RNA-degradation protein TTHA0252 {Thermus 99.67
d2i7xa1 514 Cleavage factor two protein 2, CFT2 {Baker's yeast 99.62
d2az4a1183 Hypothetical protein EF2904 {Enterococcus faecalis 99.6
d2i7ta1 451 Cleavage and polyadenylation specificity factor su 99.59
d1wraa1305 Teichoic acid phosphorylcholine esterase Pce (LytD 99.52
d2cbna1305 Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 99.3
d1y44a1307 Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId 99.29
d1vjna_209 Hypothetical protein TM0207 {Thermotoga maritima [ 99.16
d1xtoa_304 Coenzyme PQQ synthesis protein B, PqqB {Pseudomona 98.89
d2e7ya1280 Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax 98.77
>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Aeromonas hydrophila, CphA [TaxId: 644]

Probab=100.00  E-value=2.1e-33  Score=213.65  Aligned_cols=193  Identities=15%  Similarity=0.185  Sum_probs=140.9

Q ss_pred             CccccccceEEeccCCCCccCCCCceEEEEecCCceEEEecCCCCChhHHHHHHHHHhhC-CCCccEEEecccCccccCC
Q psy1547           7 NVSQLSSRVIRVLGMNPGPMTLQGTNTYILGTGSRRLLLDTGEPDHMEYIENLKQVLNKE-SISLEHIVLSHWHNDHVGG   85 (216)
Q Consensus         7 ~~~~v~~~v~~v~~~~~~~~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~~~l~~~-~~~i~~v~~TH~H~DH~gg   85 (216)
                      ++++|++|||.+.+.     .....|++++.++++++|||+|.+  ....+.+.+.+.+. +++|++|++||.|+||+||
T Consensus         4 ~~~~v~~~vy~~~~~-----~~~~~N~~~i~~~~g~vlID~g~~--~~~~~~l~~~i~~~~~~~i~~ii~TH~H~DH~gg   76 (228)
T d1x8ha_           4 SLTQVSGPVYVVEDN-----YYVQENSMVYFGAKGVTVVGATWT--PDTARELHKLIKRVSRKPVLEVINTNYHTDRAGG   76 (228)
T ss_dssp             EEEEEETTEEEEEEC-----SSSCEEEEEEECSSCEEEESCCSS--HHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTT
T ss_pred             eEEEecCCEEEEeCC-----CeecceEEEEEECCEEEEEeCCCC--HHHHHHHHHHHHHhcCCCceEEEECCCCcccccc
Confidence            678999999999743     123479999999999999999986  44456666666654 4489999999999999999


Q ss_pred             hHHHHhhcCCCcceEeccCCCCccccc-----------ccC---CCCCCCceeecCCCCeEEECCeeEEEEe-CCCCCCC
Q psy1547          86 LKDIFEHINPDSATIWKFKGTEKDEAQ-----------ATD---FVPENKTVQTLTDGQLLKVEGATLRVIH-TPGHTTD  150 (216)
Q Consensus        86 ~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------~~~---~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~pgHt~~  150 (216)
                      +..|.+.    .+++++++........           ...   ......+...+.+  .+.+++..+++++ +||||+|
T Consensus        77 ~~~~~~~----~~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~g~~~~~~~~pGHt~g  150 (228)
T d1x8ha_          77 NAYWKSI----GAKVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVHDG--DFTLQEGKVRAFYAGPAHTPD  150 (228)
T ss_dssp             HHHHHHT----TCEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEESS--CEEETTTTEEEECCCCSSSSS
T ss_pred             chhhccc----CceeeccHHHHHHHHhhhhhhcccccccccccccccccCCcEEecC--cEEEecccEEEEecCCCCCCC
Confidence            9999876    2678876543221110           000   1111122233333  3556555677775 6999999


Q ss_pred             ceEEEECCCcEEEEcceecCCCc-cccccHHHHHHHHHHHHcC--CCCeEEcCCCccccCccccc
Q psy1547         151 HIVLKLEEENVVFSGDTILGEGT-TVFSDLISYIESLRRIRSL--KPDIIYPAHGPVVEVGLSFS  212 (216)
Q Consensus       151 ~~~~~~~~~~vl~~GD~~~~~~~-~~~~~~~~~~~~l~~l~~~--~~~~v~pgHg~~~~~~~~~~  212 (216)
                      ++++++++.++||+||+++.... ....+..+|++++++++++  ++++++||||.++.+++.++
T Consensus       151 ~~~~~~~~~~vlf~GD~~~~~~~~~~~~d~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~~~e~i~  215 (228)
T d1x8ha_         151 GIFVYFPDEQVLYGGCILKEKLGNLSFADVKAYPQTLERLKAMKLPIKTVIGGHDSPLHGPELID  215 (228)
T ss_dssp             CCEEEETTTTEEECGGGSCSSCCCCTTCCTTHHHHHHHHHHHTCCCCSEEECSSSCCEECTHHHH
T ss_pred             CeEEEEcCCCEEEeccCccCCCCCCCCCCHHHHHHHHHHHHccCCCCCEEEcCCCCcCCCHHHHH
Confidence            99999999999999998765432 3347899999999999865  55699999999998876543
>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Back     information, alignment and structure
>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Back     information, alignment and structure
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Back     information, alignment and structure
>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Back     information, alignment and structure
>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Back     information, alignment and structure
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Back     information, alignment and structure
>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure